Mission Connect Mild TBI Translational Research Consortium

DTIC Science & Technology

2013-08-01

year 2 and 3 annual progress report we completed the morphometric and the diffusion tensor imaging (DTI) in cortical impact injury with and without...and morphometric measures. Response to EAB feedback: No concerns were expressed by the External Advisory Board about the MRI core. Manuscript...automatic analysis of morphometry, DTI, and MTR for both humans and rodents.  Completed morphometric and DTI analysis in traumatically injured animals

Long-term penile morphometric alterations in patients treated with robot-assisted versus open radical prostatectomy.

PubMed

Capogrosso, P; Ventimiglia, E; Cazzaniga, W; Stabile, A; Pederzoli, F; Boeri, L; Gandaglia, G; Dehò, F; Briganti, A; Montorsi, F; Salonia, A

2018-01-01

Neglected side effects after radical prostatectomy have been previously reported. In this context, the prevalence of penile morphometric alterations has never been assessed in robot-assisted radical prostatectomy series. We aimed to assess prevalence of and predictors of penile morphometric alterations (i.e. penile shortening or penile morphometric deformation) at long-term follow-up in patients submitted to either robot-assisted (robot-assisted radical prostatectomy) or open radical prostatectomy. Sexually active patients after either robot-assisted radical prostatectomy or open radical prostatectomy prospectively completed a 28-item questionnaire, with sensitive issues regarding sexual function, namely orgasmic functioning, climacturia and changes in morphometric characteristics of the penis. Only patients with a post-operative follow-up ≥ 24 months were included. Patients submitted to either adjuvant or salvage therapies or those who refused to comprehensively complete the questionnaire were excluded from the analyses. A propensity-score matching analysis was implemented to control for baseline differences between groups. Logistic regression models tested potential predictors of penile morphometric alterations at long-term post-operative follow-up. Overall, 67 (50%) and 67 (50%) patients were included after open radical prostatectomy or robot-assisted radical prostatectomy, respectively. Self-rated post-operative penile shortening and penile morphometric deformation were reported by 75 (56%) and 29 (22.8%) patients, respectively. Rates of penile shortening and penile morphometric deformation were not different after open radical prostatectomy and robot-assisted radical prostatectomy [all p > 0.5]. At univariable analysis, self-reported penile morphometric alterations (either penile shortening or penile morphometric deformation) were significantly associated with baseline international index of erectile function-erectile function scores, body mass index, post-operative erectile function recovery, year of surgery and type of surgery (all p < 0.05). At multivariable analysis, robot-assisted radical prostatectomy was independently associated with a lower risk of post-operative penile morphometric alterations (OR: 0.38; 95% CI: 0.16-0.93). Self-perceived penile morphometric alterations were reported in one of two patients after radical prostatectomy at long-term follow-up, with open surgery associated with a potential higher risk of this self-perception. © 2017 American Society of Andrology and European Academy of Andrology.

Effects of freezing on white perch Morone americana (Gmelin, 1789): Implications for multivariate morphometrics

USGS Publications Warehouse

Kocovsky, Patrick

2016-01-01

This study tested the hypothesis that duration of freezing differentially affects whole-body morphometrics of a derived teleost. Whole-body morphometrics are frequently analyzed to test hypotheses of different species, or stocks within a species, of fishes. Specimens used for morphometric analyses are typically fixed or preserved prior to analysis, yet little research has been done on how fixation or preservation methods or duration of preservation of specimens might affect outcomes of multivariate statistical analyses of differences in shape. To determine whether whole-body morphometrics changed as a result of freezing, 23 whole-body morphometrics of age-1 white perch (Morone americana) from western Lake Erie (n = 211) were analyzed immediately after capture, after being held on ice overnight, and after freezing for 100 or 200 days. Discriminant function analysis revealed that all four groups differed significantly from one another (P < 0.0001). The first canonical axis reflected long-axis morphometrics, where there was a clear pattern of positive translation along this axis with duration of preservation. Re-classification analysis demonstrated fish were typically assigned to their original preservation class except for fish frozen 100 days, which assigned mostly to frozen 200 days. Morphometric comparisons using frozen fish must be done on fish frozen for identical periods of time to avoid biases related to the length of time they were frozen. Similar experiments should be conducted on other species and also using formalin- and alcohol-preserved specimens.

Emplacement of the final lava dome of the 2009 eruption of Redoubt Volcano, Alaska

USGS Publications Warehouse

Bull, Katharine F.; Anderson, Steven W.; Diefenbach, Angela K.; Wessels, Rick L.; Henton, Sarah M.

2013-01-01

After more than 8 months of precursory activity and over 20 explosions in 12 days, Redoubt Volcano, Alaska began to extrude the fourth and final lava dome of the 2009 eruption on April 4. By July 1 the dome had filled the pre-2009 summit crater and ceased to grow. By means of analysis and annotations of time-lapse webcam imagery, oblique-image photogrammetry techniques and capture and analysis of forward-looking infrared (FLIR) images, we tracked the volume, textural, effusive-style and temperature changes in near-real time over the entire growth period of the dome. The first month of growth (April 4–May 4) produced blocky intermediate- to high-silica andesite lava (59–62.3 wt.% SiO2) that initially formed a round dome, expanding by endogenous growth, breaking the surface crust in radial fractures and annealing them with warmer, fresh lava. On or around May 1, more finely fragmented and scoriaceous andesite lava (59.8–62.2 wt.% SiO2) began to appear at the top of the dome coincident with increased seismicity and gas emissions. The more scoriaceous lava spread radially over the dome surface, while the dome continued to expand from endogenous growth and blocky lava was exposed on the margins and south side of the dome. By mid-June the upper scoriaceous lava had covered 36% of the dome surface area. Vesicularity of the upper scoriaceous lava range from 55 to 66%, some of the highest vesicularity measurements recorded from a lava dome.We suggest that the stability of the final lava dome primarily resulted from sufficient fracturing and clearing of the conduit by preceding explosions that allowed efficient degassing of the magma during effusion. The dome was thus able to grow until it was large enough to exceed the magmastatic pressure in the chamber, effectively shutting off the eruption.

Conformation of phylogenetic relationship of Penaeidae shrimp based on morphometric and molecular investigations.

PubMed

Rajakumaran, P; Vaseeharan, B; Jayakumar, R; Chidambara, R

2014-01-01

Understanding of accurate phylogenetic relationship among Penaeidae shrimp is important for academic and fisheries industry. The Morphometric and Randomly amplified polymorphic DNA (RAPD) analysis was used to make the phylogenetic relationsip among 13 Penaeidae shrimp. For morphometric analysis forty variables and total lengths of shrimp were measured for each species, and removed the effect of size variation. The size normalized values obtained was subjected to UPGMA (Unweighted Pair-Group Method with Arithmetic Mean) cluster analysis. For RAPD analysis, the four primers showed reliable differentiation between species, and used correlation coefficient between the DNA banding patterns of 13 Penaeidae species to construct UPGMA dendrogram. Phylogenetic relationship from morphometric and molecular analysis for Penaeidae species found to be congruent. We concluded that as the results from morphometry investigations concur with molecular one, phylogenetic relationship obtained for the studied Penaeidae are considered to be reliable.

Morphometric Identification of Queens, Workers and Intermediates in In Vitro Reared Honey Bees (Apis mellifera).

PubMed

De Souza, Daiana A; Wang, Ying; Kaftanoglu, Osman; De Jong, David; Amdam, Gro V; Gonçalves, Lionel S; Francoy, Tiago M

2015-01-01

In vitro rearing is an important and useful tool for honey bee (Apis mellifera L.) studies. However, it often results in intercastes between queens and workers, which are normally are not seen in hive-reared bees, except when larvae older than three days are grafted for queen rearing. Morphological classification (queen versus worker or intercastes) of bees produced by this method can be subjective and generally depends on size differences. Here, we propose an alternative method for caste classification of female honey bees reared in vitro, based on weight at emergence, ovariole number, spermatheca size and size and shape, and features of the head, mandible and basitarsus. Morphological measurements were made with both traditional morphometric and geometric morphometrics techniques. The classifications were performed by principal component analysis, using naturally developed queens and workers as controls. First, the analysis included all the characters. Subsequently, a new analysis was made without the information about ovariole number and spermatheca size. Geometric morphometrics was less dependent on ovariole number and spermatheca information for caste and intercaste identification. This is useful, since acquiring information concerning these reproductive structures requires time-consuming dissection and they are not accessible when abdomens have been removed for molecular assays or in dried specimens. Additionally, geometric morphometrics divided intercastes into more discrete phenotype subsets. We conclude that morphometric geometrics are superior to traditional morphometrics techniques for identification and classification of honey bee castes and intermediates.

Morphometric Identification of Queens, Workers and Intermediates in In Vitro Reared Honey Bees (Apis mellifera)

PubMed Central

A. De Souza, Daiana; Wang, Ying; Kaftanoglu, Osman; De Jong, David; V. Amdam, Gro; S. Gonçalves, Lionel; M. Francoy, Tiago

2015-01-01

In vitro rearing is an important and useful tool for honey bee (Apis mellifera L.) studies. However, it often results in intercastes between queens and workers, which are normally are not seen in hive-reared bees, except when larvae older than three days are grafted for queen rearing. Morphological classification (queen versus worker or intercastes) of bees produced by this method can be subjective and generally depends on size differences. Here, we propose an alternative method for caste classification of female honey bees reared in vitro, based on weight at emergence, ovariole number, spermatheca size and size and shape, and features of the head, mandible and basitarsus. Morphological measurements were made with both traditional morphometric and geometric morphometrics techniques. The classifications were performed by principal component analysis, using naturally developed queens and workers as controls. First, the analysis included all the characters. Subsequently, a new analysis was made without the information about ovariole number and spermatheca size. Geometric morphometrics was less dependent on ovariole number and spermatheca information for caste and intercaste identification. This is useful, since acquiring information concerning these reproductive structures requires time-consuming dissection and they are not accessible when abdomens have been removed for molecular assays or in dried specimens. Additionally, geometric morphometrics divided intercastes into more discrete phenotype subsets. We conclude that morphometric geometrics are superior to traditional morphometrics techniques for identification and classification of honey bee castes and intermediates. PMID:25894528

Fused Traditional and Geometric Morphometrics Demonstrate Pinniped Whisker Diversity

PubMed Central

Ginter, Carly C.; DeWitt, Thomas J.; Fish, Frank E.; Marshall, Christopher D.

2012-01-01

Vibrissae (whiskers) are important components of the mammalian tactile sensory system, and primarily function as detectors of vibrotactile information from the environment. Pinnipeds possess the largest vibrissae among mammals and their vibrissal hair shafts demonstrate a diversity of shapes. The vibrissae of most phocid seals exhibit a beaded morphology with repeating sequences of crests and troughs along their length. However, there are few detailed analyses of pinniped vibrissal morphology, and these are limited to a few species. Therefore, we comparatively characterized differences in vibrissal hair shaft morphologies among phocid species with a beaded profile, phocid species with a smooth profile, and otariids with a smooth profile using traditional and geometric morphometric methods. Traditional morphometric measurements (peak-to-peak distance, crest width, trough width and total length) were collected using digital photographs. Elliptic Fourier analysis (geometric morphometrics) was used to quantify the outlines of whole vibrissae. The traditional and geometric morphometric datasets were subsequently combined by mathematically scaling each to true rank, followed by a single eigendecomposition. Quadratic discriminant function analysis demonstrated that 79.3, 97.8 and 100% of individuals could be correctly classified to their species based on vibrissal shape variables in the traditional, geometric and combined morphometric analyses, respectively. Phocids with beaded vibrissae, phocids with smooth vibrissae, and otariids each occupied distinct morphospace in the geometric morphometric and combined data analyses. Otariids split into two groups in the geometric morphometric analysis and gray seals appeared intermediate between beaded- and smooth-whiskered species in the traditional and combined analyses. Vibrissal hair shafts modulate the transduction of environmental stimuli to the mechanoreceptors in the follicle-sinus complex (F-SC), which results in vibrotactile reception, but it is currently unclear how the diversity of shapes affects environmental signal modulation. PMID:22509310

An insight into morphometric descriptors of cell shape that pertain to regenerative medicine.

PubMed

Lobo, Joana; See, Eugene Yong-Shun; Biggs, Manus; Pandit, Abhay

2016-07-01

Cellular morphology has recently been indicated as a powerful indicator of cellular function. The analysis of cell shape has evolved from rudimentary forms of microscopic visual inspection to more advanced methodologies that utilize high-resolution microscopy coupled with sophisticated computer hardware and software for data analysis. Despite this progress, there is still a lack of standardization in quantification of morphometric parameters. In addition, uncertainty remains as to which methodologies and parameters of cell morphology will yield meaningful data, which methods should be utilized to categorize cell shape, and the extent of reliability of measurements and the interpretation of the resulting analysis. A large range of descriptors has been employed to objectively assess the cellular morphology in two-dimensional and three-dimensional domains. Intuitively, simple and applicable morphometric descriptors are preferable and standardized protocols for cell shape analysis can be achieved with the help of computerized tools. In this review, cellular morphology is discussed as a descriptor of cellular function and the current morphometric parameters that are used quantitatively in two- and three-dimensional environments are described. Furthermore, the current problems associated with these morphometric measurements are addressed. Copyright © 2015 John Wiley & Sons, Ltd. Copyright © 2015 John Wiley & Sons, Ltd.

The analysis of morphometric data on rocky mountain wolves and artic wolves using statistical method

NASA Astrophysics Data System (ADS)

Ammar Shafi, Muhammad; Saifullah Rusiman, Mohd; Hamzah, Nor Shamsidah Amir; Nor, Maria Elena; Ahmad, Noor’ani; Azia Hazida Mohamad Azmi, Nur; Latip, Muhammad Faez Ab; Hilmi Azman, Ahmad

2018-04-01

Morphometrics is a quantitative analysis depending on the shape and size of several specimens. Morphometric quantitative analyses are commonly used to analyse fossil record, shape and size of specimens and others. The aim of the study is to find the differences between rocky mountain wolves and arctic wolves based on gender. The sample utilised secondary data which included seven variables as independent variables and two dependent variables. Statistical modelling was used in the analysis such was the analysis of variance (ANOVA) and multivariate analysis of variance (MANOVA). The results showed there exist differentiating results between arctic wolves and rocky mountain wolves based on independent factors and gender.

Design and Test of Low-Profile Composite Aerospace Tank Dome

NASA Technical Reports Server (NTRS)

Ahmed, R.

1999-01-01

This report summarizes the design, analysis, manufacture, and test of a subscale, low-profile composite aerospace dome under internal pressure. A low-profile dome has a radius-to-height ratio greater than the square root of two. This effort demonstrated that a low-profile composite dome with a radius-to-height ratio of three was a feasible design and could adequately withstand the varying stress states resulting from internal pressurization. Test data for strain and displacement versus pressure are provided to validate the design.

Geometric morphometric analysis reveals age-related differences in the distal femur of Europeans.

PubMed

Cavaignac, Etienne; Savall, Frederic; Chantalat, Elodie; Faruch, Marie; Reina, Nicolas; Chiron, Philippe; Telmon, Norbert

2017-12-01

Few studies have looked into age-related variations in femur shape. We hypothesized that three-dimensional (3D) geometric morphometric analysis of the distal femur would reveal age-related differences. The purpose of this study was to show that differences in distal femur shape related to age could be identified, visualized, and quantified using three-dimensional (3D) geometric morphometric analysis. Geometric morphometric analysis was carried out on CT scans of the distal femur of 256 subjects living in the south of France. Ten landmarks were defined on 3D reconstructions of the distal femur. Both traditional metric and geometric morphometric analyses were carried out on these bone reconstructions. These analyses were used to identify trends in bone shape in various age-based subgroups (<40, 40-60, >60). Only the average bone shape of the < 40-year subgroup was statistically different from that of the other two groups. When the population was divided into two subgroups using 40 years of age as a threshold, the subject's age was correctly assigned 80% of the time. Age-related differences are present in this bone segment. This reliable, accurate method could be used for virtual autopsy and to perform diachronic and interethnic comparisons. Moreover, this study provides updated morphometric data for a modern population in the south of France. Manufacturers of knee replacement implants will have to adapt their prosthesis models as the population evolves over time.

Arc jet testing of a Dynasil dome

NASA Astrophysics Data System (ADS)

Burrell, Jack O.; Strobel, Forrest A.

1999-07-01

Arc jet testing of the Hera modified ballistic reentry vehicle - 1E (MBRV-1E) nosetip was conducted in June of 1998. The tests were conducted in the Air Force's Arnold Engineering Development Center HEAT-H1 arc plasma test facility in Tullahoma, Tennessee. The MBRV-1 vehicle is a separating short- to medium-range target. The MBRV-1E nosetip incorporates a custom designed quartz dome that is integrated into the nosetip stagnation region. The dome was bonded to the baseline nosetip material, a well characterized carbon-carbon composite material, using a silica based ceramic bond materials. The objectives of the test were to demonstrate the thermal performance and structural integrity of the nosetip design by exposing tip to arc plasma-heated flow simulating the reentry flight environment. Pre-test analysis of the Dynasil dome performed using finite element analysis predicted the dome would survive the test conditions with no failures. Post-test inspection of the dome revealed a hard, opaque coating on the outer surface of the dome. Once removed, the dome was shown to have numerous surface cracks near the stagnation region. In addition to the surface cracks, significant pitting on the surface was observed through both an optical microscope and a scanning electron microscope. Post-test analyses were performed to determine the cause of these surface cracks. It was concluded that the cracks occurred during cooldown, and were a result of significant strength degradation which was caused by the surface pitting.

Trend-surface analysis of morphometric parameters: A case study in southeastern Brazil

NASA Astrophysics Data System (ADS)

Grohmann, Carlos Henrique

2005-10-01

Trend-surface analysis was carried out on data from morphometric parameters isobase and hydraulic gradient. The study area, located in the eastern border of Quadrilátero Ferrífero, southeastern Brazil, presents four main geomorphological units, one characterized by fluvial dissection, two of mountainous relief, with a scarp of hundreds of meters of fall between them, and a flat plateau in the central portion of the fluvially dissected terrains. Morphometric maps were evaluated in GRASS-GIS and statistics were made on R statistical language, using the spatial package. Analysis of variance (ANOVA) was made to test the significance of each surface and the significance of increasing polynomial degree. The best results were achieved with sixth-order surface for isobase and second-order surface for hydraulic gradient. Shape and orientation of residual maps contours for selected trends were compared with structures inferred from several morphometric maps, and a good correlation is present.

Landmark-based geometric morphometric analysis of wing shape among certain species of Aedes mosquitoes in District Dehradun (Uttarakhand), India.

PubMed

Mondal, Ritwik; Devi, N Pemola; Jauhari, R K

2015-06-01

Insect wing morphology has been used in many studies to describe variations among species and populations using traditional morphometrics, and more recently geometric morphometrics. A landmark-based geometric morphometric analysis of the wings of three species of Aedes (Diptera: Culicidae), viz. Ae. aegypti, Ae. albopictus and Ae. pseudotaeniatus, at District Dehradun was conducted belling on the fact that it can provide insight into the population structure, ecology and taxonomic identification. Adult Aedes mosquito specimens were randomly collected using aerial nets and morphologically examined and identified. The landmarks were identified on the basis of landmark based geometric morphometric analysis thin-plate spline (mainly the software tps-Util 1.28; tps-Dig 1.40; tps-Relw 1.53; and tps-Spline 1.20) and integrated morphometrics programme (mainly twogroup win8 and PCA win8) were utilized. In relative warp (RW) analysis, the first two RW of Ae. aegypti accounted for the highest value (95.82%), followed by Ae. pseudotaeniatus (90.89%), while the lowest (90.12%) being recorded for Ae. albopictus. The bending energies of Ae. aegypti and Ae. pseudotaeniatus were quite identical being 0.1882 and 0.1858 respectively, while Ae. albopictus recorded the highest value of 0.9774. The mean difference values of the distances among Aedes species performing Hotelling's T 2 test were significantly high, predicting major differences among the taxa. In PCA analysis, the horizontal and vertical axis summarized 52.41 and 23.30% of variances respectively. The centroid size exhibited significant differences among populations (non-parametric Kruskal-Wallis test, H = 10.56, p < 0.01). It has been marked out that the geometric morphometrics utilizes powerful and comprehensive statistical procedures to analyze the shape differences of a morphological feature, assuming that the studied mosquitoes may represent different genotypes and probably come from one diverse gene pool.

Stone loaches of Choman River system, Kurdistan, Iran (Teleostei: Cypriniformes: Nemacheilidae).

PubMed

Kamangar, Barzan Bahrami; Prokofiev, Artem M; Ghaderi, Edris; Nalbant, Theodore T

2014-01-20

For the first time, we present data on species composition and distributions of nemacheilid loaches in the Choman River basin of Kurdistan province, Iran. Two genera and four species are recorded from the area, of which three species are new for science: Oxynoemacheilus kurdistanicus, O. zagrosensis, O. chomanicus spp. nov., and Turcinoemacheilus kosswigi Băn. et Nalb. Detailed and illustrated morphological descriptions and univariate and multivariate analysis of morphometric and meristic features are for each of these species. Forty morphometric and eleven meristic characters were used in multivariate analysis to select characters that could discriminate between the four loach species. Discriminant Function Analysis revealed that sixteen morphometric measures and five meristic characters have the most variability between the loach species. The dendrograms based on cluster analysis of Mahalanobis distances of morphometrics and a combination of both characters confirmed two distinct groups: Oxynoemacheilus spp. and T. kosswigi. Within Oxynoemacheilus, O. zagrosensis and O. chomanicus are more similar to one other rather to either is to O. kurdistanicus.

The use of maxillary sinus dimensions in gender determination: a thin-slice multidetector computed tomography assisted morphometric study.

PubMed

Ekizoglu, Oguzhan; Inci, Ercan; Hocaoglu, Elif; Sayin, Ibrahim; Kayhan, Fatma Tulin; Can, Ismail Ozgur

2014-05-01

Gender determination is an important step in identification. For gender determination, anthropometric evaluation is one of the main forensic evaluations. In the present study, morphometric analysis of maxillary sinuses was performed to determine gender. For morphometric analysis, coronal and axial paranasal sinus computed tomography (CT) scan with 1-mm slice thickness was used. For this study, 140 subjects (70 women and 70 men) were enrolled (age ranged between 18 and 63). The size of each subject's maxillary sinuses was measured in anteroposterior, transverse, cephalocaudal, and volume directions. In each measurement, the size of the maxillary sinus is significantly small in female gender (P < 0.001). When discrimination analysis was performed, the accuracy rate was detected as 80% for women and 74.3% for men with an overall rate of 77.15%. With the use of 1-mm slice thickness CT, morphometric analysis of maxillary sinuses will be helpful for gender determination.

Cluster Analysis of Longidorus Species (Nematoda: Longidoridae), a New Approach in Species Identification

PubMed Central

Ye, Weimin; Robbins, R. T.

2004-01-01

Hierarchical cluster analysis based on female morphometric character means including body length, distance from vulva opening to anterior end, head width, odontostyle length, esophagus length, body width, tail length, and tail width were used to examine the morphometric relationships and create dendrograms for (i) 62 populations belonging to 9 Longidorus species from Arkansas, (ii) 137 published Longidorus species, and (iii) 137 published Longidorus species plus 86 populations of 16 Longidorus species from Arkansas and various other locations by using JMP 4.02 software (SAS Institute, Cary, NC). Cluster analysis dendograms visually illustrated the grouping and morphometric relationships of the species and populations. It provided a computerized statistical approach to assist by helping to identify and distinguish species, by indicating morphometric relationships among species, and by assisting with new species diagnosis. The preliminary species identification can be accomplished by running cluster analysis for unknown species together with the data matrix of known published Longidorus species. PMID:19262809

To 3D or Not to 3D, That Is the Question: Do 3D Surface Analyses Improve the Ecomorphological Power of the Distal Femur in Placental Mammals?

PubMed Central

Gould, Francois D. H.

2014-01-01

Improvements in three-dimensional imaging technologies have renewed interest in the study of functional and ecological morphology. Quantitative approaches to shape analysis are used increasingly to study form-function relationships. These methods are computationally intensive, technically demanding, and time-consuming, which may limit sampling potential. There have been few side-by-side comparisons of the effectiveness of such approaches relative to more traditional analyses using linear measurements and ratios. Morphological variation in the distal femur of mammals has been shown to reflect differences in locomotor modes across clades. Thus I tested whether a geometric morphometric analysis of surface shape was superior to a multivariate analysis of ratios for describing ecomorphological patterns in distal femoral variation. A sample of 164 mammalian specimens from 44 genera was assembled. Each genus was assigned to one of six locomotor categories. The same hypotheses were tested using two methods. Six linear measurements of the distal femur were taken with calipers, from which four ratios were calculated. A 3D model was generated with a laser scanner, and analyzed using three dimensional geometric morphometrics. Locomotor category significantly predicted variation in distal femoral morphology in both analyses. Effect size was larger in the geometric morphometric analysis than in the analysis of ratios. Ordination reveals a similar pattern with arboreal and cursorial taxa as extremes on a continuum of morphologies in both analyses. Discriminant functions calculated from the geometric morphometric analysis were more accurate than those calculated from ratios. Both analysis of ratios and geometric morphometric surface analysis reveal similar, biologically meaningful relationships between distal femoral shape and locomotor mode. The functional signal from the morphology is slightly higher in the geometric morphometric analysis. The practical costs of conducting these sorts of analyses should be weighed against potentially slight increases in power when designing protocols for ecomorphological studies. PMID:24633081

UKIRT Upgrades Program: design and installation of the Dome Ventilation System (DVS)

NASA Astrophysics Data System (ADS)

Neff, D. H.; Hileman, Edward A.; Kain, S. J.; Cavedoni, Charles P.; Chuter, Timothy C.

1997-03-01

In order to encourage adequate dome ventilation to reduce or eliminate dome seeing at the 3.8 m United Kingdom Infrared Telescope (UKIRT), a dome ventilation system (DVS) was designed to be installed in the lower dome skirt. The modifications to the dome for the new DVS apertures consisted of installing a reinforcing frame containing an insulated rollup door and adjustable louvers. This paper describes the finite element structural analysis of the reinforcing frame, the detailed design of the frame hardware, the design of the programmable language control (PLC) system for controlling the opening and closing of the rollup doors, and the fabrication and installation of a prototype frame assembly. To date, a prototype assembly has been installed that confirms the design, and fifteen production assemblies are currently under fabrication for installation by September 1996.

Contact between the acetabulum and dome of a Kerboull-type plate influences the stress on the plate and screw.

PubMed

Hara, Katsutoshi; Kaku, Nobuhiro; Tabata, Tomonori; Tsumura, Hiroshi

2015-07-01

We used a three-dimensional finite element method to investigate the conditions behind the Kerboull-type (KT) dome. The KT plate dome was divided into five areas, and 14 models were created to examine different conditions of dome contact with the acetabulum. The maximum stress on the KT plate and screws was estimated for each model. Furthermore, to investigate the impact of the contact area with the acetabulum on the KT plate, a multiple regression analysis was conducted using the analysis results. The dome-acetabulum contact area affected the maximum equivalent stress on the KT plate; good contact with two specific areas of the vertical and horizontal beams (Areas 3 and 5) reduced the maximum equivalent stress. The maximum equivalent stress on the hook increased when the hardness of the bone representing the acetabulum varied. Thus, we confirmed the technical importance of providing a plate with a broad area of appropriate support from the bone and cement in the posterior portion of the dome and also proved the importance of supporting the area of the plate in the direction of the load at the center of the cross-plate and near the hook.

Analysis and test of low profile aluminum aerospace tank dome

NASA Astrophysics Data System (ADS)

Ahmed, R.; Wilhelm, J. M.

1993-12-01

In order to increase the structural performance of cryogenic tanks, the aerospace industry is beginning to employ low-profile bulkheads in new generation launch vehicle designs. This report details the analysis and test of one such dome made from 2219 aluminum. Such domes have two potential failure modes under internal pressure, general tensile failure and hoop compression buckling (in regions near the equator). The test determined the buckling load and ultimate tensile load of the hardware and showed that both compared well with the analysis predictions. This effort was conducted under the auspices of NASA and the General Dynamics Cryogenic Tank Technology Program (CTTP).

Analysis and test of low profile aluminum aerospace tank dome

NASA Technical Reports Server (NTRS)

Ahmed, R.; Wilhelm, J. M.

1993-01-01

In order to increase the structural performance of cryogenic tanks, the aerospace industry is beginning to employ low-profile bulkheads in new generation launch vehicle designs. This report details the analysis and test of one such dome made from 2219 aluminum. Such domes have two potential failure modes under internal pressure, general tensile failure and hoop compression buckling (in regions near the equator). The test determined the buckling load and ultimate tensile load of the hardware and showed that both compared well with the analysis predictions. This effort was conducted under the auspices of NASA and the General Dynamics Cryogenic Tank Technology Program (CTTP).

Structural Analysis of Helios Filament-Wound Tanks Subjected to Internal Pressure and Cooling

NASA Technical Reports Server (NTRS)

Ko, William L

2005-01-01

A finite-element stress analysis is performed on Helios filament-wound hydrogen tanks to examine the stress field and effect of end dome geometry on the stress field. Each tank is composed of a central circular cylindrical section with either geodesic or hemispherical end domes, which have metallic polar bosses. The tanks are subjected to combined and separate internal pressure and temperature loading conditions, and the stress contributions of each loading component are examined. The tank-wall-polar-boss interfacial meridional tensile stress in the hemispherical dome is found to be approximately 27 percent lower than that in the geodesic dome. The effects of both material anisotropy and the aluminum lining on the intensities of tensile meridional stress at the tank-wall-polar-boss bonding interface are examined.

Muon radiography and deformation analysis of the lava dome formed by the 1944 eruption of Usu, Hokkaido —Contact between high-energy physics and volcano physics—

PubMed Central

TANAKA, Hiroyuki K. M.; YOKOYAMA, Izumi

2008-01-01

Lava domes are one of the conspicuous topographic features on volcanoes. The subsurface structure of the lava dome is important to discuss its formation mechanism. In the 1944 eruption of Volcano Usu, Hokkaido, a new lava dome was formed at its eastern foot. After the completion of the lava dome, various geophysical methods were applied to the dome to study its subsurface structure, but resulted in a rather ambiguous conclusion. Recently, from the results of the levelings, which were repeated during the eruption, “pseudo growth curves” of the lava dome were obtained. The curves suggest that the lava dome has a bulbous shape. In the present work, muon radiography, which previously proved effective in imaging the internal structure of Volcano Asama, has been applied to the Usu lava dome. The muon radiography measures the distribution of the “density length” of volcanic bodies when detectors are arranged properly. The result obtained is consistent with the model deduced from the pseudo growth curves. The measurement appears to afford useful method to clarify the subsurface structure of volcanoes and its temporal changes, and in its turn to discuss volcanic processes. This is a point of contact between high-energy physics and volcano physics. PMID:18941290

Muon radiography and deformation analysis of the lava dome formed by the 1944 eruption of Usu, Hokkaido--contact between high-energy physics and volcano physics--.

PubMed

K M Tanaka, Hiroyuki; Yokoyama, Izumi

2008-01-01

Lava domes are one of the conspicuous topographic features on volcanoes. The subsurface structure of the lava dome is important to discuss its formation mechanism. In the 1944 eruption of Volcano Usu, Hokkaido, a new lava dome was formed at its eastern foot. After the completion of the lava dome, various geophysical methods were applied to the dome to study its subsurface structure, but resulted in a rather ambiguous conclusion. Recently, from the results of the levelings, which were repeated during the eruption, "pseudo growth curves" of the lava dome were obtained. The curves suggest that the lava dome has a bulbous shape. In the present work, muon radiography, which previously proved effective in imaging the internal structure of Volcano Asama, has been applied to the Usu lava dome. The muon radiography measures the distribution of the "density length" of volcanic bodies when detectors are arranged properly. The result obtained is consistent with the model deduced from the pseudo growth curves. The measurement appears to afford useful method to clarify the subsurface structure of volcanoes and its temporal changes, and in its turn to discuss volcanic processes. This is a point of contact between high-energy physics and volcano physics.

Parametric analysis of lava dome-collapse events and pyroclastic deposits at Shiveluch volcano, Kamchatka, using visible and infrared satellite data

NASA Astrophysics Data System (ADS)

Krippner, Janine B.; Belousov, Alexander B.; Belousova, Marina G.; Ramsey, Michael S.

2018-04-01

For the years 2001 to 2013 of the ongoing eruption of Shiveluch volcano, a combination of different satellite remote sensing data are used to investigate the dome-collapse events and the resulting pyroclastic deposits. Shiveluch volcano in Kamchatka, Russia, is one of the world's most active dome-building volcanoes, which has produced some of the largest known historical block-and-ash flows (BAFs). Globally, quantitative data for deposits resulting from such large and long-lived dome-forming eruptions, especially like those at Shiveluch, are scarce. We use Advanced Spaceborne Thermal Emission and Reflection Radiometer (ASTER) thermal infrared (TIR), shortwave infrared (SWIR), and visible-near infrared (VNIR) data to analyze the dome-collapse scars and BAF deposits that were formed during eruptions and collapse events in 2001, 2004, 2005, 2007, 2009, 2010, and two events in 2013. These events produced flows with runout distances of as far as 19 km from the dome, and with aerial extents of as much as 22.3 km2. Over the 12 years of this period of investigation, there is no trend in deposit area or runout distances of the flows through time. However, two potentially predictive features are apparent in our data set: 1) the largest dome-collapse events occurred when the dome exceeded a relative height (from dome base to top) of 500 m; 2) collapses were preceded by thermal anomalies in six of the cases in which ASTER data were available, although the areal extent of these precursory thermal areas did not generally match the size of the collapse events as indicated by scar area (volumes are available for three collapse events). Linking the deposit distribution to the area, location, and temperature profiles of the dome-collapse scars provides a basis for determining similar future hazards at Shiveluch and at other dome-forming volcanoes. Because of these factors, we suggest that volcanic hazard analysis and mitigation at volcanoes with similar BAF emplacement behavior may be improved with detailed, synoptic studies, especially when it is possible to access and interpret appropriate remote sensing data in near-real time.

Morphometric discrimination of early life stage Lampetra tridentata and L richardsoni (Petromyzonidae) from the Columbia river basin

USGS Publications Warehouse

Meeuwig, M.H.; Bayer, J.M.; Reiche, R.A.

2006-01-01

The effectiveness of morphometric and meristic characteristics for taxonomic discrimination of Lampetra tridentata and L. richardsoni (Petromyzonidae) during embryological, prolarval, and early larval stages (i.e., age class 1) were examined. Mean chorion diameter increased with time from fertilization to hatch and was significantly greater for L. tridentata than for L. richardsoni at 1, 8, and 15 days postfertilization. Lampetra tridentata larvae had significantly more trunk myomeres than L. richardsoni; however, trunk myomere numbers were highly variable within species and deviated from previously published data. Multivariate examinations of prolarval and larval L. tridentata (7.2-11.0 mm; standard length) and L. richardsoni (6.6-10.8 mm) were conducted based on standard length and truss element lengths established from eight homologous landmarks. Principal components analysis indicated allometric relationships among the morphometric characteristics examined. Changes in body shape were indicated by groupings of morphometric characteristics associated with body regions (e.g., oral hood, branchial region, trunk region, and tail region). Discriminant function analysis using morphometric characteristics was successful in classifying a large proportion (>94.7%) of the lampreys sampled. 

Where is the Best Site on Earth? Domes A, B, C, and F, and Ridges A and B

NASA Technical Reports Server (NTRS)

Suanders, Will; Lawrence, Jon S.; Storey, John W. V.; Ashley, Michael C. B.; Kato, Seiji; Minnis, Patrick; Winker, David M.; Liu, Guiping; Kulesa, Craig

2009-01-01

The Antarctic plateau contains the best sites on earth for many forms of astronomy, but none of the existing bases were selected with astronomy as the primary motivation. In this paper, we try to systematically compare the merits of potential observatory sites. We include South Pole, Domes A, C and F, and also Ridge B (running NE from Dome A), and what we call Ridge A (running SW from Dome A). Our analysis combines satellite data, published results and atmospheric models, to compare the boundary layer, weather, free atmosphere, sky brightness, pecipitable water vapour, and surface temperature at each site. We find that all Antarctic sites are likely compromised for optical work by airglow and aurorae. Of the sites with existing bases, Dome A is the best overall; but we find that Ridge A offers an even better site. We also find that Dome F is a remarkably good site. Dome C is less good as a thermal infrared or terahertz site, but would be able to take advantage of a predicted OH hole over Antarctica during Spring.

Numerical analysis of pressure and porosity evolution in lava domes during periodic degassing conditions

NASA Astrophysics Data System (ADS)

Hyman, D.; Bursik, M. I.; Pitman, E. B.

2017-12-01

The collapse or explosive breakup of growing and degassing lava domes presents a significant hazard due to the generation of dense, mobile pyroclastic flows as well as the wide dispersal of dense ballistic blocks. Lava dome stability is in large part governed by the balance of transport and storage of gas within the pore space. Because pore pressurization reduces the effective stress within a dome, the transient distribution of elevated gas pressure is critically important to understanding dome break up. We combine mathematical and numerical analyses to gain a better understanding of the temporal variation in gas flow and storage within the dome system. In doing so, we develop and analyze new governing equations describing nonlinear gas pressure diffusion in a deforming dome with an evolving porosity field. By relating porosity, permeability, and pressure, we show that the flux of gas through a dome is highly sensitive to the porosity distribution and viscosity of the lava, as well as the timescale and magnitude of the gas supply. The numerical results suggest that the diffusion of pressure and porosity variations play an integral role in the cyclic growth and destruction of small domes.The nearly continuous cycles of lava dome growth, pressurization, and failure that have characterized the last two decades of eruptive history at Volcán Popocatépetl, Mexico provide excellent natural data with which to compare new models of transient dome pressurization. At Popocatépetl, periodic pressure increases brought on by changes in gas supply into the base of the dome may play a role in its cyclic growth and destruction behavior. We compare our model of cyclic pressurization with lava dome survival data from Popocatépetl. We show that transient changes in pore pressure explain how small lava domes evolve to a state of criticality before explosion or collapse. Additionally, numerical analyses presented here suggest that short-term oscillations cannot arise within the dome, and must be the result of an oscillating supply of gas into the dome. The oscillating gas supply may result from alternating gas-rich and gas-poor regions of rising magma, so-called "porosity waves" within the conduit. These internal pressure fluctuations lead to periodic reductions in the stress required to fracture the dome and induce explosion.

Water-quality data for aquifers, streams, and lakes in the vicinity of Keechi, Mount Sylvan, Oakwood, and Palestine salt domes, northeast Texas salt-dome basin

USGS Publications Warehouse

Carr, Jerry E.; Halasz, Stephen J.; Liscum, Fred

1980-01-01

This report contains water-quality data for aquifers, streams, and lakes in the vicinity of Keechi, Mount Sylvan, Oakwood, and Palestine Salt Domes, in the northeast Texas salt-dome basin. Water-quality data were compiled for aquifers in the Wilcox Group, the Carrizo Sand, and the Queen City Sand. The data include analyses for dissolved solids, pH, temperature, hardness, calcium, magnesium, sodium, bicarbonate, chloride, and sulfate. Water-quality and streamflow data were obtained from 63 surface-water sites in the vicinity of the domes. These data include water discharge, specific conductance, pH, water temperature, and dissolved oxygen. Samples were collected at selected sites for analysis of principal and selected minor dissolved constituents.

Evaluation of Chemical Preparation on Insect Wing Shape for Geometric Morphometrics

PubMed Central

Lorenz, Camila; Suesdek, Lincoln

2013-01-01

Geometric morphometrics is an approach that has been increasingly applied in studies with insects. A limiting factor of this technique is that some mosquitoes have wings with dark spots or many scales, which jeopardizes the visualization of landmarks for morphometric analysis. Recently, in some studies, chemically treatment (staining) of the wings was used to improve the viewing of landmarks. In this study, we evaluated whether this method causes deformation of the wing veins and tested whether it facilitates the visualization of the most problematic landmarks. In addition, we tested whether mechanical removal of the scales was sufficient for this purpose. The results showed that the physical and chemical treatments are equally effective in improving visualization of the landmarks. The chemical method did not cause deformation of the wing. Thus, some of these treatments should be performed before beginning geometric morphometric analysis to avoid erroneous landmark digitizing. PMID:24019438

MORPHOMETRIC EVIDENCE FOR NUTRITIONAL STRESS IN ENGLISH SOLE

EPA Science Inventory

We present an application of the powerful thin plate spline method of morphometric analysis to demonstrate its utility for detecting environmental stress in an estuarine flatfish. Juvenile English sole (Pleuronectes vetulus) were captured from Yaquina Bay, Oregon, photographed w...

East Greenland and Barents Sea polar bears (Ursus maritimus): adaptive variation between two populations using skull morphometrics as an indicator of environmental and genetic differences.

PubMed

Pertoldi, Cino; Sonne, Christian; Wiig, Øystein; Baagøe, Hans J; Loeschcke, Volker; Bechshøft, Thea Østergaard

2012-06-01

A morphometric study was conducted on four skull traits of 37 male and 18 female adult East Greenland polar bears (Ursus maritimus) collected 1892-1968, and on 54 male and 44 female adult Barents Sea polar bears collected 1950-1969. The aim was to compare differences in size and shape of the bear skulls using a multivariate approach, characterizing the variation between the two populations using morphometric traits as an indicator of environmental and genetic differences. Mixture analysis testing for geographic differentiation within each population revealed three clusters for Barents Sea males and three clusters for Barents Sea females. East Greenland consisted of one female and one male cluster. A principal component analysis (PCA) conducted on the clusters defined by the mixture analysis, showed that East Greenland and Barents Sea polar bear populations overlapped to a large degree, especially with regards to females. Multivariate analyses of variance (MANOVA) showed no significant differences in morphometric means between the two populations, but differences were detected between clusters from each respective geographic locality. To estimate the importance of genetics and environment in the morphometric differences between the bears, a PCA was performed on the covariance matrix derived from the skull measurements. Skull trait size (PC1) explained approx. 80% of the morphometric variation, whereas shape (PC2) defined approx. 15%, indicating some genetic differentiation. Hence, both environmental and genetic factors seem to have contributed to the observed skull differences between the two populations. Overall, results indicate that many Barents Sea polar bears are morphometrically similar to the East Greenland ones, suggesting an exchange of individuals between the two populations. Furthermore, a subpopulation structure in the Barents Sea population was also indicated from the present analyses, which should be considered with regards to future management decisions. © 2012 The Authors.

Sensitivity of drainage morphometry based hydrological response (GIUH) of a river basin to the spatial resolution of DEM data

NASA Astrophysics Data System (ADS)

Sahoo, Ramendra; Jain, Vikrant

2018-02-01

Drainage network pattern and its associated morphometric ratios are some of the important plan form attributes of a drainage basin. Extraction of these attributes for any basin is usually done by spatial analysis of the elevation data of that basin. These planform attributes are further used as input data for studying numerous process-response interactions inside the physical premise of the basin. One of the important uses of the morphometric ratios is its usage in the derivation of hydrologic response of a basin using GIUH concept. Hence, accuracy of the basin hydrological response to any storm event depends upon the accuracy with which, the morphometric ratios can be estimated. This in turn, is affected by the spatial resolution of the source data, i.e. the digital elevation model (DEM). We have estimated the sensitivity of the morphometric ratios and the GIUH derived hydrograph parameters, to the resolution of source data using a 30 meter and a 90 meter DEM. The analysis has been carried out for 50 drainage basins in a mountainous catchment. A simple and comprehensive algorithm has been developed for estimation of the morphometric indices from a stream network. We have calculated all the morphometric parameters and the hydrograph parameters for each of these basins extracted from two different DEMs, with different spatial resolutions. Paired t-test and Sign test were used for the comparison. Our results didn't show any statistically significant difference among any of the parameters calculated from the two source data. Along with the comparative study, a first-hand empirical analysis about the frequency distribution of the morphometric and hydrologic response parameters has also been communicated. Further, a comparison with other hydrological models suggests that plan form morphometry based GIUH model is more consistent with resolution variability in comparison to topographic based hydrological model.

Morphometric and landsliding analyses in chain domain: the Roccella basin, NE Sicily, Italy

NASA Astrophysics Data System (ADS)

Rapisarda, Francesco

2009-10-01

The dynamic interaction of endogenic and exogenic processes in active geodynamic context leads to the deterioration of the physico-mechanical characteristics of the rocks, inducing slopes instability. In such context, the morphometric parameters and the analysis of landslide distribution contribute to appraise the evolutive state of hydrographic basins. The aim of the study is the morphometric characterization of the Roccella Torrent basin (Rtb) located in South Italy. Landsliding and tectonic structure dynamically interact with the drainage pattern that records these effects and permits the definition of the evolutive geomorphic stage of the basin. The Air Photograph Investigation and field surveys permitted to draw the main geomorphic features, the drainage pattern of the Rtb, to calculate the morphometric parameters and to delimit the landslides’ bodies. Detailed analysis about the landslide distribution within a test site 17 km2 wide were carried out to elaborate indicative indexes of the landslides type and to single out the lithotypes that are more involved in slope instability phenomena. The morphometric parameters indicate the rejuvenation state within the Rtb where the stream reaches show the effects of increased energy relief in agreement with the geological settings of this sector of the Apennine-Maghrebian Chain.

Geospatial tool-based morphometric analysis using SRTM data in Sarabanga Watershed, Cauvery River, Salem district, Tamil Nadu, India

NASA Astrophysics Data System (ADS)

Arulbalaji, P.; Gurugnanam, B.

2017-11-01

A morphometric analysis of Sarabanga watershed in Salem district has been chosen for the present study. Geospatial tools, such as remote sensing and GIS, are utilized for the extraction of river basin and its drainage networks. The Shuttle Radar Topographic Mission (SRTM-30 m resolution) data have been used for morphometric analysis and evaluating various morphometric parameters. The morphometric parameters of Sarabanga watershed have been analyzed and evaluated by pioneer methods, such as Horton and Strahler. The dendritic type of drainage pattern is draining the Sarabanga watershed, which indicates that lithology and gentle slope category is controlling the study area. The Sarabanga watershed is covered an area of 1208 km2. The slope of the watershed is various from 10 to 40% and which is controlled by lithology of the watershed. The bifurcation ratio ranges from 3 to 4.66 indicating the influence of geological structure and suffered more structural disturbances. The form factor indicates elongated shape of the study area. The total stream length and area of watershed indicate that mean annual rainfall runoff is relatively moderate. The basin relief expressed that watershed has relatively high denudation rates. The drainage density of the watershed is low indicating that infiltration is more dominant. The ruggedness number shows the peak discharges that are likely to be relatively higher. The present study is very useful to plan the watershed management.

Monitoring lava-dome growth during the 2004-2008 Mount St. Helens, Washington, eruption using oblique terrestrial photography

USGS Publications Warehouse

Major, J.J.; Dzurisin, D.; Schilling, S.P.; Poland, Michael P.

2009-01-01

We present an analysis of lava dome growth during the 2004–2008 eruption of Mount St. Helens using oblique terrestrial images from a network of remotely placed cameras. This underutilized monitoring tool augmented more traditional monitoring techniques, and was used to provide a robust assessment of the nature, pace, and state of the eruption and to quantify the kinematics of dome growth. Eruption monitoring using terrestrial photography began with a single camera deployed at the mouth of the volcano's crater during the first year of activity. Analysis of those images indicates that the average lineal extrusion rate decayed approximately logarithmically from about 8 m/d to about 2 m/d (± 2 m/d) from November 2004 through December 2005, and suggests that the extrusion rate fluctuated on time scales of days to weeks. From May 2006 through September 2007, imagery from multiple cameras deployed around the volcano allowed determination of 3-dimensional motion across the dome complex. Analysis of the multi-camera imagery shows spatially differential, but remarkably steady to gradually slowing, motion, from about 1–2 m/d from May through October 2006, to about 0.2–1.0 m/d from May through September 2007. In contrast to the fluctuations in lineal extrusion rate documented during the first year of eruption, dome motion from May 2006 through September 2007 was monotonic (± 0.10 m/d) to gradually slowing on time scales of weeks to months. The ability to measure spatial and temporal rates of motion of the effusing lava dome from oblique terrestrial photographs provided a significant, and sometimes the sole, means of identifying and quantifying dome growth during the eruption, and it demonstrates the utility of using frequent, long-term terrestrial photography to monitor and study volcanic eruptions.

Morphometric classification of Spanish thoroughbred stallion sperm heads.

PubMed

Hidalgo, Manuel; Rodríguez, Inmaculada; Dorado, Jesús; Soler, Carles

2008-01-30

This work used semen samples collected from 12 stallions and assessed for sperm morphometry by the Sperm Class Analyzer (SCA) computer-assisted system. A discriminant analysis was performed on the morphometric data from that sperm to obtain a classification matrix for sperm head shape. Thereafter, we defined six types of sperm head shape. Classification of sperm head by this method obtained a globally correct assignment of 90.1%. Moreover, significant differences (p<0.05) were found between animals for all the sperm head morphometric parameters assessed.

Cytological study of DNA content and nuclear morphometric analysis for aid in the diagnosis of high-grade dysplasia within oral leukoplakia.

PubMed

Yang, Xi; Xiao, Xuan; Wu, Wenyan; Shen, Xuemin; Zhou, Zengtong; Liu, Wei; Shi, Linjun

2017-09-01

To quantitatively examine the DNA content and nuclear morphometric status of oral leukoplakia (OL) and investigate its association with the degree of dysplasia in a cytologic study. Oral cytobrush biopsy was carried out to obtain exfoliative epithelial cells from lesions before scalpel biopsy at the same location in a blinded series of 70 patients with OL. Analysis of nuclear morphometry and DNA content status using image cytometry was performed with oral smears stained with the Feulgen-thionin method. Nuclear morphometric analysis revealed significant differences in DNA content amount, DNA index, nuclear area, nuclear radius, nuclear intensity, sphericity, entropy, and fractal dimension (all P < .01) between low-grade and high-grade dysplasia. DNA content analysis identified 34 patients with OL (48.6%) with DNA content abnormality. Nonhomogeneous lesion (P = .018) and high-grade dysplasia (P = .008) were significantly associated with abnormal DNA content. Importantly, the positive correlation between the degree of oral dysplasia and DNA content status was significant (P = .004, correlation coefficient = 0.342). Cytology analysis of DNA content and nuclear morphometric status using image cytometry may support their use as a screening and monitoring tool for OL progression. Copyright © 2017 Elsevier Inc. All rights reserved.

An experimental study on Sokkuram Cave Temple dome's indoor environment using a miniature model in winter season

DOE Office of Scientific and Technical Information (OSTI.GOV)

Kong, S.H.; Chung, K.S.; Park, J.S.

1999-07-01

Currently, there are many researches on the analysis of indoor environment in Sokkuram Cave Temple. However, there is not enough researches about an experimental study on the dome's indoor environment in Sokkuram Cave Temple using a miniature model. The purpose of this investigation is to measure and analyze characteristics of indoor environment such as relative humidity, dry bulb temperature and air velocity in the miniature model of Sokkuram Cave dome during winter season.

Investigation into the High Voltage Shutdown of the Oxygen Generator System in the International Space Station

NASA Technical Reports Server (NTRS)

Carpenter, Joyce E.; Gentry, Gregory J.; Diderich, Greg S.; Roy, Robert J.; Golden, John L.; VanKeuren, Steve; Steele, John W.; Rector, Tony J.; Varsik, Jerome D.; Montefusco, Daniel J.;

Sperm kinematic, head morphometric and kinetic-morphometric subpopulations in the blue fox (Alopex lagopus).

PubMed

Soler, Carles; Contell, Jesús; Bori, Lorena; Sancho, María; García-Molina, Almudena; Valverde, Anthony; Segarvall, Jan

2017-01-01

This work provides information on the blue fox ejaculated sperm quality needed for seminal dose calculations. Twenty semen samples, obtained by masturbation, were analyzed for kinematic and morphometric parameters by using CASA-Mot and CASA-Morph system and principal component (PC) analysis. For motility, eight kinematic parameters were evaluated, which were reduced to PC1, related to linear variables, and PC2, related to oscillatory movement. The whole population was divided into three independent subpopulations: SP1, fast cells with linear movement; SP2, slow cells and nonoscillatory motility; and SP3, medium speed cells and oscillatory movement. In almost all cases, the subpopulation distribution by animal was significantly different. Head morphology analysis generated four size and four shape parameters, which were reduced to PC1, related to size, and PC2, related to shape of the cells. Three morphometric subpopulations existed: SP1: large oval cells; SP2: medium size elongated cells; and SP3: small and short cells. The subpopulation distribution differed between animals. Combining the kinematic and morphometric datasets produced PC1, related to morphometric parameters, and PC2, related to kinematics, which generated four sperm subpopulations - SP1: high oscillatory motility, large and short heads; SP2: medium velocity with small and short heads; SP3: slow motion small and elongated cells; and SP4: high linear speed and large elongated cells. Subpopulation distribution was different in all animals. The establishment of sperm subpopulations from kinematic, morphometric, and combined variables not only improves the well-defined fox semen characteristics and offers a good conceptual basis for fertility and sperm preservation techniques in this species, but also opens the door to use this approach in other species, included humans.

Sperm kinematic, head morphometric and kinetic-morphometric subpopulations in the blue fox (Alopex lagopus)

PubMed Central

Soler, Carles; Contell, Jesús; Bori, Lorena; Sancho, María; García-Molina, Almudena; Valverde, Anthony; Segarvall, Jan

2017-01-01

This work provides information on the blue fox ejaculated sperm quality needed for seminal dose calculations. Twenty semen samples, obtained by masturbation, were analyzed for kinematic and morphometric parameters by using CASA-Mot and CASA-Morph system and principal component (PC) analysis. For motility, eight kinematic parameters were evaluated, which were reduced to PC1, related to linear variables, and PC2, related to oscillatory movement. The whole population was divided into three independent subpopulations: SP1, fast cells with linear movement; SP2, slow cells and nonoscillatory motility; and SP3, medium speed cells and oscillatory movement. In almost all cases, the subpopulation distribution by animal was significantly different. Head morphology analysis generated four size and four shape parameters, which were reduced to PC1, related to size, and PC2, related to shape of the cells. Three morphometric subpopulations existed: SP1: large oval cells; SP2: medium size elongated cells; and SP3: small and short cells. The subpopulation distribution differed between animals. Combining the kinematic and morphometric datasets produced PC1, related to morphometric parameters, and PC2, related to kinematics, which generated four sperm subpopulations – SP1: high oscillatory motility, large and short heads; SP2: medium velocity with small and short heads; SP3: slow motion small and elongated cells; and SP4: high linear speed and large elongated cells. Subpopulation distribution was different in all animals. The establishment of sperm subpopulations from kinematic, morphometric, and combined variables not only improves the well-defined fox semen characteristics and offers a good conceptual basis for fertility and sperm preservation techniques in this species, but also opens the door to use this approach in other species, included humans. PMID:27751987

Sex estimation from sternal measurements using multidetector computed tomography.

PubMed

Ekizoglu, Oguzhan; Hocaoglu, Elif; Inci, Ercan; Bilgili, Mustafa Gokhan; Solmaz, Dilek; Erdil, Irem; Can, Ismail Ozgur

2014-12-01

We aimed to show the utility and reliability of sternal morphometric analysis for sex estimation.Sex estimation is a very important step in forensic identification. Skeletal surveys are main methods for sex estimation studies. Morphometric analysis of sternum may provide high accuracy rated data in sex discrimination. In this study, morphometric analysis of sternum was evaluated in 1 mm chest computed tomography scans for sex estimation. Four hundred forty 3 subjects (202 female, 241 male, mean age: 44 ± 8.1 [distribution: 30-60 year old]) were included the study. Manubrium length (ML), mesosternum length (2L), Sternebra 1 (S1W), and Sternebra 3 (S3W) width were measured and also sternal index (SI) was calculated. Differences between genders were evaluated by student t-test. Predictive factors of sex were determined by discrimination analysis and receiver operating characteristic (ROC) analysis. Male sternal measurement values are significantly higher than females (P < 0.001) while SI is significantly low in males (P < 0.001). In discrimination analysis, MSL has high accuracy rate with 80.2% in females and 80.9% in males. MSL also has the best sensitivity (75.9%) and specificity (87.6%) values. Accuracy rates were above 80% in 3 stepwise discrimination analysis for both sexes. Stepwise 1 (ML, MSL, S1W, S3W) has the highest accuracy rate in stepwise discrimination analysis with 86.1% in females and 83.8% in males. Our study showed that morphometric computed tomography analysis of sternum might provide important information for sex estimation.

Comparative morphological and morphometric description of the hominin calvaria from Bukuran (Sangiran, Central Java, Indonesia).

PubMed

Grimaud-Hervé, Dominique; Widianto, Harry; Détroit, Florent; Sémah, François

2012-11-01

We describe the hominin skull (called here "Bukuran") discovered in the lower Kabuh (or "Bapang") series near Sendangbusik, from the Bukuran area in the Sangiran dome. The fossil, heavily mineralized, consists of the parieto-occipital and the left temporal, and the frontal bones. When combined, those two cranial parts represent a rather complete and well-preserved calvaria. Its stratigraphic position was established after the discovery. A detailed description is presented of the morphological and metric features of the Bukuran calvaria, and comparisons are made with Asian Homo erectus from Indonesia and China. The estimated cranial capacity of Bukuran, the general shape of its cranial vault, its ectocranial structures, and its morphological and metrical characters are in the range of Asian Homo erectus, and show clear affinities with other Indonesian members of the species. We discuss the evolutionary status of the Bukuran calvaria and its implication for hominin history on Java. Copyright © 2012 Elsevier Ltd. All rights reserved.

In ovo evaluation of FloraMax®-B11 on Marek´s disease HVT vaccine protective efficacy, hatchability, microbiota composition, morphometric analysis, and Salmonella Enteritidis infection in broiler chickens

USDA-ARS?s Scientific Manuscript database

Four experiments were conducted to evaluate the effect of in ovo administration of FloraMax®-B11 (FM) on Marek´s disease (MD) herpesvirus of turkeys (HVT) vaccine protective efficacy, hatchability, microbiota composition, morphometric analysis and Salmonella enteritidis (SE) infection in chickens. I...

LIGHT-ing Up Prostate Cancer for Immunotherapy

DTIC Science & Technology

2017-10-01

patients with evanescent carcinoma. According to their location, they are probably IL17-producing type 3 innate lymphoid cells , which have been...with a Hamamatsu camera after performing morphometric analysis. Morphometric Analysis of Lymphoid and B Cell Follicles Lymphoid follicles (LF) were...activation, and CD8 T  cell accumulation are evident in prostate tumor-associated tertiary lymphoid organs (TLO). The 5-µm thick paraffin sections

3-DIMENSIONAL Geometric Survey and Structural Modelling of the Dome of Pisa Cathedral

NASA Astrophysics Data System (ADS)

Aita, D.; Barsotti, R.; Bennati, S.; Caroti, G.; Piemonte, A.

2017-02-01

This paper aims to illustrate the preliminary results of a research project on the dome of Pisa Cathedral (Italy). The final objective of the present research is to achieve a deep understanding of the structural behaviour of the dome, through a detailed knowledge of its geometry and constituent materials, and by taking into account historical and architectural aspects as well. A reliable survey of the dome is the essential starting point for any further investigation and adequate structural modelling. Examination of the status quo on the surveys of the Cathedral dome shows that a detailed survey suitable for structural analysis is in fact lacking. For this reason, high-density and high-precision surveys have been planned, by considering that a different survey output is needed, according both to the type of structural model chosen and purposes to be achieved. Thus, both range-based (laser scanning) and image-based (3D Photogrammetry) survey methodologies have been used. This contribution introduces the first results concerning the shape of the dome derived from surveys. Furthermore, a comparison is made between such survey outputs and those available in the literature.

Flexure and faulting of sedimentary host rocks during growth of igneous domes, Henry Mountains, Utah

USGS Publications Warehouse

Jackson, M.D.; Pollard, D.D.

1990-01-01

A sequence of sedimentary rocks about 4 km thick was bent, stretched and uplifted during the growth of three igneous domes in the southern Henry Mountains. Mount Holmes, Mount Ellsworth and Mount Hillers are all about 12 km in diameter, but the amplitudes of their domes are about 1.2, 1.85 and 3.0 km, respectively. These mountains record successive stages in the inflation of near-surface diorite intrusions that are probably laccolithic in origin. The host rocks deformed along networks of outcrop-scale faults, or deformation bands, marked by crushed grains, consolidation of the porous sandstone and small displacements of sedimentary beds. Zones of deformation bands oriented parallel to the beds and formation contacts subdivided the overburden into thin mechanical layers that slipped over one another during doming. Measurements of outcrop-scale fault populations at the three mountains reveal a network of faults that strikes at high angles to sedimentary beds which themselves strike tangentially about the domes. These faults have normal and reverse components of slip that accommodated bending and stretching strains within the strata. An early stage of this deformation is displayed at Mount Holmes, where states of stress computed from three fault samples correlate with the theoretical distribution of stresses resulting from bending of thin, circular, elastic plates. Field observations and analysis of frictional driving stresses acting on horizontal planes above an opening-mode dislocation, as well as the paleostress analysis of faulting, indicate that bedding-plane slip and layer flexure were important components of the early deformation. As the amplitude of doming increased, radial and circumferential stretching of the strata and rotation of the older faults in the steepening limbs of the domes increased the complexity of the fault patterns. Steeply-dipping, map-scale faults with dip-slip displacements indicate a late-stage jostling of major blocks over the central magma chamber. Radial dikes pierced the dome and accommodated some of the circumferential stretching. ?? 1990.

Bedrock topography of Talos Dome and Frontier Mountain area

NASA Astrophysics Data System (ADS)

Forieri, A.; Tabacco, I.; della Vedova, A.; Zirizzotti, A.; de Michelis, P.

2003-04-01

Talos Dome is an ice dome in the East Antarctica near the coastal line. The exact position was located first with the analysis of ERS-1 data and then from kinematic GPS data collected in 2002. In the area of Talos Dome two traverse surveys were carried out in 1996 and 2002 and eight shallow snow firn cores were drilled in order to understand latitudinal and longitudinal gradient and to document climatic and atmospheric conditions. The interest in Talos Dome area is due to the possibility to extract an ice core down to the bedrock: it would be the first deep drilling in a near coastal site. Frontier Mountain is located about 30 km SE from Talos Dome and its blue ice field is an important meteorite trap. The mechanism concentration is due to the particular flow of ice, slow moving against an absolute and submerged barrier. In the area of Talos Dome and Frontier Mountain airborne radar surveys were conducted by Italian PNRA (Programma Nazionale di Ricerche in Antartide) in 1995, 1997, 1999 and 2001. We present here the bedrock topography obtained by the analysis of all radar data. Our objective is to have a full description of main caractheristics of the bedrock. This could be helpful in the choice of the best site for drilling and could provide more input data for flow model near Frontier Mountain. Radar data are not homogeneous because radar systems with different characteristics have been used. All data have been processed with the same criteria to obtain a homogeneous dataset. Radio-echo sounding records show quite good reflections from the ice sheet base and the internal layering. This confirms the preliminary results of snow radar data with a continuous and horizontal (up to 15 km from the Dome) internal layering. The data of all expeditions have been cross-controlled and are in good agreement each-other.

Morphological evidence for discrete stocks of yellow perch in Lake Erie

USGS Publications Warehouse

Kocovsky, Patrick M.; Knight, Carey T.

2012-01-01

Identification and management of unique stocks of exploited fish species are high-priority management goals in the Laurentian Great Lakes. We analyzed whole-body morphometrics of 1430 yellow perch Perca flavescens captured during 2007–2009 from seven known spawning areas in Lake Erie to determine if morphometrics vary among sites and management units to assist in identification of spawning stocks of this heavily exploited species. Truss-based morphometrics (n = 21 measurements) were analyzed using principal component analysis followed by ANOVA of the first three principal components to determine whether yellow perch from the several sampling sites varied morphometrically. Duncan's multiple range test was used to determine which sites differed from one another to test whether morphometrics varied at scales finer than management unit. Morphometrics varied significantly among sites and annually, but differences among sites were much greater. Sites within the same management unit typically differed significantly from one another, indicating morphometric variation at a scale finer than management unit. These results are largely congruent with recently-published studies on genetic variation of yellow perch from many of the same sampling sites. Thus, our results provide additional evidence that there are discrete stocks of yellow perch in Lake Erie and that management units likely comprise multiple stocks.

The 2006 lava dome eruption of Merapi Volcano (Indonesia): Detailed analysis using MODIS TIR

NASA Astrophysics Data System (ADS)

Carr, Brett B.; Clarke, Amanda B.; Vanderkluysen, Loÿc

2016-02-01

Merapi is one of Indonesia's most active and dangerous volcanoes. Prior to the 2010 VEI 4 eruption, activity at Merapi during the 20th century was characterized by the growth and collapse of a series of lava domes. Periods of very slow growth were punctuated by short episodes of increased eruption rates characterized by dome collapse-generated pyroclastic density currents (PDCs). An eruptive event of this type occurred in May-June, 2006. For effusive eruptions such as this, detailed extrusion rate records are important for understanding the processes driving the eruption and the hazards presented by the eruption. We use thermal infrared (TIR) images from the Moderate Resolution Imaging Spectrometer (MODIS) instrument on NASA's Aqua and Terra satellites to estimate extrusion rates at Merapi Volcano during the 2006 eruption using the method of Harris and Ripepe (2007). We compile a set of 75 nighttime MODIS images of the eruptive period to produce a detailed time series of thermal radiance and extrusion rate that reveal multiple phases of the 2006 eruption. These data closely correspond to the published ground-based observational record and improve observation density and detail during the eruption sequence. Furthermore, additional analysis of radiance values for thermal anomalies in Band 21 (λ = 3.959 μm) of MODIS images results in a new framework for detecting different styles of activity. We successfully discriminate among slow dome growth, rapid dome growth, and PDC-producing dome collapse. We also demonstrate a positive correlation between PDC frequency and extrusion rate, and provide evidence that extrusion rate can increase in response to external events such as dome collapses or tectonic earthquakes. This study represents a new method of documenting volcanic activity that can be applied to other similar volcanic systems.

Morphometric and kinematic sperm subpopulations in split ejaculates of normozoospermic men

PubMed Central

Santolaria, Pilar; Soler, Carles; Recreo, Pilar; Carretero, Teresa; Bono, Araceli; Berné, José M; Yániz, Jesús L

2016-01-01

This study was designed to analyze the sperm kinematic and morphometric subpopulations in the different fractions of the ejaculate in normozoospermic men. Ejaculates from eight normozoospermic men were collected by masturbation in three fractions after 3–5 days of sexual abstinence. Analyses of sperm motility by computer-assisted sperm analysis (CASA-Mot), and of sperm morphometry by computer-assisted sperm morphometry analysis (CASA-Morph) using fluorescence were performed. Clustering and discriminant procedures were performed to identify sperm subpopulations in the kinematic and morphometric data obtained. Clustering procedures resulted in the classification of spermatozoa into three kinematic subpopulations (slow with low ALH [35.6% of all motile spermatozoa], with circular trajectories [32.0%], and rapid with high ALH [32.4%]), and three morphometric subpopulations (large-round [33.9% of all spermatozoa], elongated [32.0%], and small [34.10%]). The distribution of kinematic sperm subpopulations was different among ejaculate fractions (P < 0.001), with higher percentages of spermatozoa exhibiting slow movements with low ALH in the second and third portions, and with a more homogeneous distribution of kinematic sperm subpopulations in the first portion. The distribution of morphometric sperm subpopulations was also different among ejaculate fractions (P < 0.001), with more elongated spermatozoa in the first, and of small spermatozoa in the third, portion. It is concluded that important variations in the distribution of kinematic and morphometric sperm subpopulations exist between ejaculate fractions, with possible functional implications. PMID:27624985

Log analysis of six boreholes in conjunction with geologic characterization above and on top of the Weeks Island salt dome

DOE Office of Scientific and Technical Information (OSTI.GOV)

Sattler, A.R.

1996-04-01

Six boreholes were drilled during the geologic characterization and diagnostics of the Weeks Island sinkhole that is over the two-tiered salt mine which was converted for oil storage by the US Strategic Petroleum Reserve. These holes were drilled to provide for geologic characterization of the Weeks Island Salt Dome and its overburden in the immediate vicinity of the sinkhole (mainly through logs and core); to establish a crosswell configuration for seismic tomography; to establish locations for hydrocarbon detection and tracer injection; and to Provide direct observations of sinkhole geometry and material properties. Specific objectives of the logging program were to:more » (1) identify the top of and the physical state of the salt dome; (2) identify the water table; (3) obtain a relative salinity profile in the aquifer within the alluvium, which ranges from the water table directly to the top of the Weeks Island salt dome; and (4) identify a reflecting horizon seen on seismic profiles over this salt dome. Natural gamma, neutron, density, sonic, resistivity and caliper logs were run. Neutron and density logs were run from inside the well casing because of the extremely unstable condition of the deltaic alluvium overburden above the salt dome. The logging program provided important information about the salt dome and the overburden in that (1) the top of the salt dome was identified at {approximately}189 ft bgl (103 ft msl), and the top of the dome contains relatively few fractures; (2) the water table is approximately 1 ft msl, (3) this aquifer appears to become steadily more saline with depth; and (4) the water saturation of much of the alluvium over the salt dome is shown to be influenced by the prevalent heavy rainfall. This logging program, a part of the sinkhole diagnostics, provides unique information about this salt dome and the overburden.« less

Differentiating sex and species of Western Grebes (Aechmophorus occidentalis) and Clark's Grebes (Aechmophorus clarkii) and their eggs using external morphometrics and discriminant function analysis

USGS Publications Warehouse

Hartman, C. Alex; Ackerman, Joshua T.; Eagles-Smith, Collin A.; Herzog, Mark

2016-01-01

In birds where males and females are similar in size and plumage, sex determination by alternative means is necessary. Discriminant function analysis based on external morphometrics was used to distinguish males from females in two closely related species: Western Grebe (Aechmophorus occidentalis) and Clark's Grebe (A. clarkii). Additionally, discriminant function analysis was used to evaluate morphometric divergence between Western and Clark's grebe adults and eggs. Aechmophorus grebe adults (n = 576) and eggs (n = 130) were sampled across 29 lakes and reservoirs throughout California, USA, and adult sex was determined using molecular analysis. Both Western and Clark's grebes exhibited considerable sexual size dimorphism. Males averaged 6–26% larger than females among seven morphological measurements, with the greatest sexual size dimorphism occurring for bill morphometrics. Discriminant functions based on bill length, bill depth, and short tarsus length correctly assigned sex to 98% of Western Grebes, and a function based on bill length and bill depth correctly assigned sex to 99% of Clark's Grebes. Further, a simplified discriminant function based only on bill depth correctly assigned sex to 96% of Western Grebes and 98% of Clark's Grebes. In contrast, external morphometrics were not suitable for differentiating between Western and Clark's grebe adults or their eggs, with correct classification rates of discriminant functions of only 60%, 63%, and 61% for adult males, adult females, and eggs, respectively. Our results indicate little divergence in external morphology between species of Aechmophorus grebes, and instead separation is much greater between males and females.

Wing morphometrics as a possible tool for the diagnosis of the Ceratitis fasciventris, C. anonae, C. rosa complex (Diptera, Tephritidae).

PubMed

Van Cann, Joannes; Virgilio, Massimiliano; Jordaens, Kurt; De Meyer, Marc

2015-01-01

Previous attempts to resolve the Ceratitis FAR complex (Ceratitis fasciventris, Ceratitis anonae, Ceratitis rosa, Diptera, Tephritidae) showed contrasting results and revealed the occurrence of five microsatellite genotypic clusters (A, F1, F2, R1, R2). In this paper we explore the potential of wing morphometrics for the diagnosis of FAR morphospecies and genotypic clusters. We considered a set of 227 specimens previously morphologically identified and genotyped at 16 microsatellite loci. Seventeen wing landmarks and 6 wing band areas were used for morphometric analyses. Permutational multivariate analysis of variance detected significant differences both across morphospecies and genotypic clusters (for both males and females). Unconstrained and constrained ordinations did not properly resolve groups corresponding to morphospecies or genotypic clusters. However, posterior group membership probabilities (PGMPs) of the Discriminant Analysis of Principal Components (DAPC) allowed the consistent identification of a relevant proportion of specimens (but with performances differing across morphospecies and genotypic clusters). This study suggests that wing morphometrics and PGMPs might represent a possible tool for the diagnosis of species within the FAR complex. Here, we propose a tentative diagnostic method and provide a first reference library of morphometric measures that might be used for the identification of additional and unidentified FAR specimens.

Geometric morphometrics in primatology: craniofacial variation in Homo sapiens and Pan troglodytes.

PubMed

Lynch, J M; Wood, C G; Luboga, S A

1996-01-01

Traditionally, morphometric studies have relied on statistical analysis of distances, angles or ratios to investigate morphometric variation among taxa. Recently, geometric techniques have been developed for the direct analysis of landmark data. In this paper, we offer a summary (with examples) of three of these newer techniques, namely shape coordinate, thin-plate spline and relative warp analyses. Shape coordinate analysis detected significant craniofacial variation between 4 modern human populations, with African and Australian Aboriginal specimens being relatively prognathous compared with their Eurasian counterparts. In addition, the Australian specimens exhibited greater basicranial flexion than all other samples. The observed relationships between size and craniofacial shape were weak. The decomposition of shape variation into affine and non-affine components is illustrated via a thin-plate spline analysis of Homo and Pan cranial landmarks. We note differences between Homo and Pan in the degree of prognathism and basicranial flexion and the position and orientation of the foramen magnum. We compare these results with previous studies of these features in higher primates and discuss the utility of geometric morphometrics as a tool in primatology and physical anthropology. We conclude that many studies of morphological variation, both within and between taxa, would benefit from the graphical nature of these techniques.

Population studies of Glossina pallidipes in Ethiopia: emphasis on cuticular hydrocarbons and wing morphometric analysis.

PubMed

Getahun, M N; Cecchi, G; Seyoum, E

2014-10-01

Tsetse flies, like many insects, use pheromones for inter- and intra-specific communication. Several of their pheromones are cuticular hydrocarbons (CHCs) that are perceived by contact at close range. We hypothesized that for a successful implementation of the Sterile Insect Technique (SIT), along with proper identification of target area and target species, the target tsetse populations and the sterile flies must chemically communicate with each other. To study the population structuring of Glossina pallidipes in Ethiopia, CHCs were extracted and analyzed from three tsetse belts. As a comparative approach, wing morphometric analysis was performed. The analysis of the relative abundance of CHCs revealed that populations of G. pallidipes from the Rift Valley tsetse belt showed a distinct clustering compared to populations from the other two belts. The spatial pattern of CHC differences was complemented by the wing morphometric analysis. Our data suggest that CHCs of known biological and ecological role, when combined with wing morphometric data, will provide an alternative means for the study of population structuring of Glossina populations. This could aid the planning of area wide control strategies using SIT, which is dependent on sexual competence. Copyright © 2014 International Atomic Energy Agency 2014. Published by Elsevier B.V. All rights reserved.

Morphometric evaluation of the knee in Chinese population reveals sexual dimorphism and age-related differences.

PubMed

Li, Ke; Cavaignac, Etienne; Xu, Wei; Cheng, Qiang; Telmon, Nobert; Huang, Wei

2018-02-20

Morphologic data of the knee is very important in the design of total knee prostheses. Generally, the designs of the total knee prostheses are based on the knee anatomy of Caucasian population. Moreover, in forensic medicine, a person's age and sex might be estimated by the shape of their knees. The aim of this study is to utilize three-dimensional morphometric analysis of the knee in Chinese population to reveal sexual dimorphism and age-related differences. Sexually dimorphic differences and age-related differences of the distal femur were studied by using geometric morphometric analysis of ten osteometric landmarks on three-dimensional reconstructions of 259 knees in Chinese population. General Procrustes analysis, PCA, and other discriminant analysis such as Mahalanobis and Goodall's F test were conducted for the knee to identify sexually dimorphism and age-related differences of the knee. The shape of distal femur between the male and female is significantly different. A difference between males and females in distal femur shape was identified by PCA; PC1 and PC2 accounted for 61.63% of the variance measured. The correct sex was assigned in 84.9% of cases by CVA, and the cross-validation revealed a 81.1% rate of correct sex estimation. The osteometric analysis also showed significant differences between the three age-related subgroups (< 40, 40-60, > 60 years, p < 0.005). This study showed both sex-related difference and age-related difference in the distal femur in Chinese population by 3D geometric morphometric analysis. Our bone measurements and geometric morphometric analysis suggest that population characteristics should be taken into account and may provide references for design of total knee prostheses in a Chinese population. Moreover, this reliable, accurate method could be used to perform diachronic and interethnic comparisons.

Topological data analysis as a morphometric method: using persistent homology to demarcate a leaf morphospace

USDA-ARS?s Scientific Manuscript database

Current morphometric methods that comprehensively measure shape cannot compare the disparate leaf shapes found in flowering plants and are sensitive to processing artifacts. Here we describe a persistent homology approach to measuring shape. Persistent homology is a topological method (concerned wit...

Photogrammetric monitoring of lava dome growth during the 2009 eruption of Redoubt Volcano

USGS Publications Warehouse

Diefenbach, Angela K.; Bull, Katharine F.; Wessels, Rick; McGimsey, Robert G.

2013-01-01

The 2009 eruption of Redoubt Volcano, Alaska, began with a phreatic explosion on 15 March followed by a series of at least 19 explosive events and growth and destruction of at least two, and likely three, lava domes between 22 March and 4 April. On 4 April explosive activity gave way to continuous lava effusion within the summit crater. We present an analysis of post-4 April lava dome growth using an oblique photogrammetry approach that provides a safe, rapid, and accurate means of measuring dome growth. Photogrammetric analyses of oblique digital images acquired during helicopter observation flights and fixed-wing volcanic gas surveys produced a series of digital elevation models (DEMs) of the lava dome from 16 April to 23 September. The DEMs were used to calculate estimates of volume and time-averaged extrusion rates and to quantify morphological changes during dome growth.Effusion rates ranged from a maximum of 35 m3 s− 1 during the initial two weeks to a low of 2.2 m3 s− 1 in early summer 2009. The average effusion rate from April to July was 9.5 m3 s− 1. Early, rapid dome growth was characterized by extrusion of blocky lava that spread laterally within the summit crater. In mid-to-late April the volume of the dome had reached 36 × 106 m3, roughly half of the total volume, and dome growth within the summit crater began to be limited by confining crater walls to the south, east, and west. Once the dome reached the steep, north-sloping gorge that breaches the crater, growth decreased to the south, but the dome continued to inflate and extend northward down the gorge. Effusion slowed during 16 April–1 May, but in early May the rate increased again. This rate increase was accompanied by a transition to exogenous dome growth. From mid-May to July the effusion rate consistently declined. The decrease is consistent with observations of reduced seismicity, gas emission, and thermal anomalies, as well as declining rates of geodetic deflation or inflation. These trends suggest dome growth ceased by July 2009. The volume of the dome at the end of the 2009 eruption was about 72 × 106 m3, more than twice the estimated volume of the largest dome extruded during the 1989–1990 eruption. In total, the 2009 dome extends over 400 m down the glacial gorge on the north end of the crater, with a total length of 1 km, width of 500 m and an average thickness of 200 m.

Sex Estimation From Sternal Measurements Using Multidetector Computed Tomography

PubMed Central

Ekizoglu, Oguzhan; Hocaoglu, Elif; Inci, Ercan; Bilgili, Mustafa Gokhan; Solmaz, Dilek; Erdil, Irem; Can, Ismail Ozgur

2014-01-01

Abstract We aimed to show the utility and reliability of sternal morphometric analysis for sex estimation. Sex estimation is a very important step in forensic identification. Skeletal surveys are main methods for sex estimation studies. Morphometric analysis of sternum may provide high accuracy rated data in sex discrimination. In this study, morphometric analysis of sternum was evaluated in 1 mm chest computed tomography scans for sex estimation. Four hundred forty 3 subjects (202 female, 241 male, mean age: 44 ± 8.1 [distribution: 30–60 year old]) were included the study. Manubrium length (ML), mesosternum length (2L), Sternebra 1 (S1W), and Sternebra 3 (S3W) width were measured and also sternal index (SI) was calculated. Differences between genders were evaluated by student t-test. Predictive factors of sex were determined by discrimination analysis and receiver operating characteristic (ROC) analysis. Male sternal measurement values are significantly higher than females (P < 0.001) while SI is significantly low in males (P < 0.001). In discrimination analysis, MSL has high accuracy rate with 80.2% in females and 80.9% in males. MSL also has the best sensitivity (75.9%) and specificity (87.6%) values. Accuracy rates were above 80% in 3 stepwise discrimination analysis for both sexes. Stepwise 1 (ML, MSL, S1W, S3W) has the highest accuracy rate in stepwise discrimination analysis with 86.1% in females and 83.8% in males. Our study showed that morphometric computed tomography analysis of sternum might provide important information for sex estimation. PMID:25501090

Effects of Starvation in Rock Bream, Oplegnathus fasciatus and Olive Flounder, Paralichthys olivaceus

PubMed Central

Park, In-Seok; Gil, Hyun Woo; Yoo, Gwang Yeol; Oh, Ji Su

2015-01-01

We assessed the effects of various dietary conditions on the growth, phenotypic traits, and morphometric dimensions of rock bream, Oplegnathus fasciatus and on the morphometric dimensions of sectioned olive flounder, Paralichthys olivaceus. Rock bream in the fed group increased in body weight, standard length, and condition factor, but these parameters decreased significantly for fish in the starved group (P < 0.05). The head connection dimensions of fish in the fed group decreased, while for starved fish there was increase in external morphometric dimensions (P < 0.05). In both species, sectioned morphometric analysis revealed that fish in the fed group had a larger body circumference and cross-cut sectional area, and greater cross-cut section height, relative to the starved group (P < 0.05). PMID:27004266

Dietary Ecology of Murinae (Muridae, Rodentia): A Geometric Morphometric Approach

PubMed Central

Gómez Cano, Ana Rosa; Hernández Fernández, Manuel; Álvarez-Sierra, M. Ángeles

2013-01-01

Murine rodents represent a highly diverse group, which displays great ecological versatility. In the present paper we analyse the relationship between dental morphology, on one hand, using geometric morphometrics based upon the outline of first upper molar and the dietary preference of extant murine genera, on the other. This ecomorphological study of extant murine rodents demonstrates that dietary groups can be distinguished with the use of a quantitative geometric morphometric approach based on first upper molar outline. A discriminant analysis of the geometric morphometric variables of the first upper molars enables us to infer the dietary preferences of extinct murine genera from the Iberian Peninsula. Most of the extinct genera were omnivore; only Stephanomys showed a pattern of dental morphology alike that of the herbivore genera. PMID:24236090

Morphometric Analysis of the Occipital Condyle and Its Surgical Importance

PubMed Central

Das, Sushant Swaroop; Vasudeva, Neelam

2016-01-01

Introduction The Occipital Condyle (OC) is an integral component of craniovertebral region which is predisposed to a wide array of traumatic, degenerative and neoplastic diseases. Frequent surgical interventions of OC are required for successful management of these conditions. Hence a meticulous anatomical knowledge of the OC is vital but variability in morphometric dimensions exist amongst different races and hinder the standardization of measurements. Aim The aim of this study was to present a morphometric reference database for OC of the Indian population and enable comparisons with other populations. Materials and Methods The study was performed on 228 OC of 114 adult human skulls. Linear measurements of the OC were taken with the help of digital Vernier’s Calliper and angular measurements were determined with software Image J. Statistical Analysis Mean and standard deviation of the morphometric parameters taken into account were analysed. The comparison of morphometric dimensions of the right and left sides was carried out using Student’s t-test and p-value was calculated. Results The morphometric analysis of the OC established that mean width was larger (12.97 mm) in Indians population when compared to other races. The anterior and posterior intercondylar distances as well as the distances between the tips of OC and opisthion and basion were observed to be shorter in Indians. We found a significant difference (p=0.01) among the distance between Posterior tip of Occipital Condyle (POC) and basion of the right and left sides. The sagittal condylar angle and sagittal intercondylar angle were found to be greater in our study when compared to other researchers. There existed a highly significant difference (p=0.001) between the sagittal condylar angles of the right and left sides. Conclusion The present morphometric study would be valuable for the successful instrumentation of the OC as wider and ventrally oriented OC as well as smaller intercondylar distances may pose challenge to the surgeons during condylectomy. The data of present study offer anatomical reference to the surgeons and would be helpful in designing implants for the OC. PMID:28050351

Satellite-based constraints on explosive SO2 release from Soufrière Hills Volcano, Montserrat

NASA Astrophysics Data System (ADS)

Carn, Simon A.; Prata, Fred J.

2010-09-01

Numerous episodes of explosive degassing have punctuated the 1995-2009 eruption of Soufrière Hills volcano (SHV), Montserrat, often following major lava dome collapses. We use ultraviolet (UV) and infrared (IR) satellite measurements to quantify sulfur dioxide (SO2) released by explosive degassing, which is not captured by routine ground-based and airborne gas monitoring. We find a total explosive SO2 release of ˜0.5 Tg, which represents ˜6% of total SO2 emissions from SHV since July 1995. The majority of this SO2 (˜0.4 Tg) was vented following the most voluminous SHV dome collapses in July 2003 and May 2006. Based on our analysis, we suggest that the SO2 burden measured following explosive disruption of lava domes depends on several factors, including the instantaneous lava effusion rate, dome height above the conduit, and the vertical component of directed explosions. Space-based SO2 measurements merit inclusion in routine gas monitoring at SHV and other dome-forming volcanoes.

Sub-surface structure of La Soufrière of Guadeloupe lava dome deduced from a ground-based magnetic survey

NASA Astrophysics Data System (ADS)

Bouligand, Claire; Coutant, Olivier; Glen, Jonathan M. G.

2016-07-01

In this study, we present the analysis and interpretation of a new ground magnetic survey acquired at the Soufrière volcano on Guadeloupe Island. Observed short-wavelength magnetic anomalies are compared to those predicted assuming a constant magnetization within the sub-surface. The good correlation between modeled and observed data over the summit of the dome indicates that the shallow sub-surface displays relatively constant and high magnetization intensity. In contrast, the poor correlation at the base of the dome suggests that the underlying material is non- to weakly-magnetic, consistent with what is expected for a talus comprised of randomly oriented and highly altered and weathered boulders. The new survey also reveals a dipole anomaly that is not accounted for by a constant magnetization in the sub-surface and suggests the existence of material with decreased magnetization beneath the Soufrière lava dome. We construct simple models to constrain its dimensions and propose that this body corresponds to hydrothermally altered material within and below the dome. The very large inferred volume for such material may have implications on the stability of the dome.

Holodeck: Telepresence Dome Visualization System Simulations

NASA Technical Reports Server (NTRS)

Hite, Nicolas

2012-01-01

This paper explores the simulation and consideration of different image-projection strategies for the Holodeck, a dome that will be used for highly immersive telepresence operations in future endeavors of the National Aeronautics and Space Administration (NASA). Its visualization system will include a full 360 degree projection onto the dome's interior walls in order to display video streams from both simulations and recorded video. Because humans innately trust their vision to precisely report their surroundings, the Holodeck's visualization system is crucial to its realism. This system will be rigged with an integrated hardware and software infrastructure-namely, a system of projectors that will relay with a Graphics Processing Unit (GPU) and computer to both project images onto the dome and correct warping in those projections in real-time. Using both Computer-Aided Design (CAD) and ray-tracing software, virtual models of various dome/projector geometries were created and simulated via tracking and analysis of virtual light sources, leading to the selection of two possible configurations for installation. Research into image warping and the generation of dome-ready video content was also conducted, including generation of fisheye images, distortion correction, and the generation of a reliable content-generation pipeline.

Acute Exposure of Medaka to Carcinogens: An Ultrastructural, Cytochemical and Morphometric Analysis of Liver and Kidney

DTIC Science & Technology

1993-05-20

statements regarding acid phosphatase activity are not possible because of the inconsistency of labeling. Morphometric analysis were conducted on ratios of...may result from the combining of TCE and other toxic substances. The two enzyme systems selected for examination, acid phosphatase and peroxidase are...administration of DENA have demonstrated altered activity of several enzymes, including acid phosphatase (Fischer et al., 1983). Long term treatment of rodents

Investigation of Energy Transfer Dynamics Between Target Contrast Agents and Prostate Cancer Cells Using Ultrafast Spectroscopy

DTIC Science & Technology

2012-05-01

morphometric comparison with clinically detected cancer in totally embedded specimens”, Hum. Pathol., 36, 646– 654 (2005). 20. Y. Pu, W. B. Wang...combination of optical spectroscopic investigations and fractal geometric analysis presents an intriguing possibility for development of a useful...prostate cancer. Morphometric analysis in whole-mount sections’’. Virchow Arch. 2000. 437: 625-634. 4. M. Chaplin. ‘‘Do we underestimate the importance

Constraints from Mesozoic siliciclastic cover rocks and satellite image analysis on the slip history of regional E-W faults in the southeast Western Desert, Egypt

NASA Astrophysics Data System (ADS)

Tewksbury, Barbara J.; Mehrtens, Charlotte J.; Gohlke, Steven A.; Tarabees, Elhamy A.; Hogan, John P.

2017-12-01

In the southeast Western Desert of Egypt, a prominent set of E-W faults and co-located domes and basins involve sedimentary cover rock as young as the early Eocene. Although earlier Mesozoic slip on faults in southern Egypt has been widely mentioned in the literature and attributed to repeated reactivation of basement faults, evidence is indirect and based on the idea that regional stresses associated with tectonic events in the Syrian Arc would likely have reactivated basement faults in south Egypt in dextral strike slip during the Mesozoic as well as the Cenozoic. Here, we present direct evidence from the rock record for the sequence of development of features along these faults. Southwest of Aswan, a small structural dome in Mesozoic Nubia facies rocks occurs where the Seiyal Fault bends northward from west to east. The dome is cut by strands of the Seiyal Fault and a related set of cataclastic deformation bands showing dominantly right lateral strike slip, as well as by younger calcite veins with related patchy poikilotopic cement. High resolution satellite image analysis of the remote southwest Kharga Valley shows a similar sequence of events: older structural domes and basins located where E-W faults bend northward from west to east, right lateral offset of domes and basins along the E-W faults, and two sets of deformation band faults that lack co-located domes and basins. We suggest that field data, image analysis, and burial depth estimates are best explained by diachronous development of features along the E-W fault system. We propose that Late Mesozoic right lateral strike slip produced domes and basins in Nubia facies rocks in stepover regions above reactivated basement faults. We further suggest that the extensively linked segments of the E-W fault system in Nubia facies rocks, plus the deformation band systems, formed during the late Eocene when basement faults were again reactivated in dominantly right lateral strike slip.

Structure and Kinematics of a Complex Crater: Upheaval Dome, Southeast, Utah

NASA Technical Reports Server (NTRS)

Kriens, B. J.; Herkenhoff, K. E.; Shoemaker, E. M.

1997-01-01

Two vastly different phenomena, extraterrestrial impact and salt diapirism, have been proposed for the origin of Upheaval Dome. Upheaval Dome is a about 2.5-km-diameter structural dome surrounded by a 5-km-diameter ring structural depression, which is in turn flanked by extensive, nearly flat-lying Colorado Plateau strata. Seismic refraction data and geologic mapping indicate that the dome originated by the collapse of a transient cavity formed by impact; data also show that rising salt has had a negligible influence on dome development. Evidence for this includes several factors: (1) a rare lag deposit of impactite is present; (2) fan-tailed fracture surfaces (shatter surfaces) and a few shattercones are present; (3) the top of the underlying salt horizon is at least 500 m below the center of the dome, with no exposures of salt in the dome to support the possibility that a salt diapir has ascended through it; (4) sedimentary strata in the center are significantly imbricated by top-to-the-center thrust faulting and are complexly folded; (5) top-to-the-center low-angle normal faults are found at the perimeter of the structure; and (6) clastic dikes are widespread. The scarcity of melt rocks and shock fabrics is attributed to approximately 0.5 km of erosion; the structures of the dome reflect processes of complex crater development at a depth of about 0.5 km below the crater floor. Based on mapping and kinematic analysis, we infer that the dome formed mainly by centerward motion of rock units along listric faults. Outcrop-scale folding and upturning of beds, especially common in the center, largely resulted from this motion. In addition, we have detected some centerward motion of fault-bounded wedges resulting from displacements on subhorizontal faults that conjoin and die out within horizontal bedding in the perimeter of the structure. Collectively, the observed deformation accounts for the creation of both the central uplift and the encircling ring syncline.

A comprehensive morphometric analysis of the internal thoracic artery with emphasis on age, gender and left-to-right specific differences.

PubMed

Borović, Milica Labudovi; Borović, Saša; Marinković-Erić, Jelena; Todorović, Vera; Puškaš, Nela; Kočica, Mladen; Radak, Đorđe; Lačković, Vesna

2013-10-01

The aim of this analysis was the morphometric description of the internal thoracic artery (ITA) with an emphasis on age, gender and left-to-right specific differences, as well as on age and atherosclerosis related changes of the elastic skeleton. Forty eight arteries were obtained during forensic autopsies from 32 persons who had died of non-vascular causes. The following morphometric parameters were analyzed: thickness of the intima, the medial layer and the wall, the intima-to media-ratio and the elastic skeleton parameters. The intima thickness increases significantly with aging (ANOVA F=34.061, p⟨0.001), as does the intima-to-media ratio (ANOVA F=10.831, p⟨0.001). With aging, there is a significant increase in the thickness of the media (F=56.519; p⟨0.001) and of the wall (F=34.094; p⟨0,001). There is a significant increase in the media thickness during the development of atherosclerosis in the ITA (ANOVA F=11.848, p⟨0.001). No significant difference was found when these data were analyzed based on the left-to-right principle or depending on gender of the patients. However, the analysis of the elastic skeleton parameters indicated that the combined effects of aging, atherosclerosis and male gender lead to the degeneration of the elastic skeleton of the ITA. The grade of atherosclerosis gradually increases with aging as shown by morphometric analysis. The increase in the medial layer thickness suggests the potential for positive remodeling of the ITA during aging and atherosclerosis. The left/right position has no influence on morphometric parameters of the ITA, while male gender affects parameters of the elastic skeleton.

Insights into the evolution of the Yenkahe resurgent dome (Siwi caldera, Tanna Island, Vanuatu) inferred from aerial high-resolution photogrammetry

NASA Astrophysics Data System (ADS)

Brothelande, E.; Lénat, J.-F.; Normier, A.; Bacri, C.; Peltier, A.; Paris, R.; Kelfoun, K.; Merle, O.; Finizola, A.; Garaebiti, E.

2016-08-01

The Yenkahe dome (Tanna Island, Vanuatu) is one of the most spectacular examples of presently active post-caldera resurgence, exhibiting a very high uplift rate over the past 1000 years (156 mm/year on average). Although numerous inhabited areas are scattered around the dome, the dynamics of this structure and associated hazards remain poorly studied because of its remote location and dense vegetation cover. A high-resolution photogrammetric campaign was carried out in November 2011 over the dome. Georeferenced photographs were treated by "Structure from Motion" and "Multiple-view Stereophotogrammetry" methods to produce a 3D-digital surface model (DSM) of the area and its associated orthophotograph. This DSM is much more accurate than previously available SRTM and Aster digital elevation models (DEMs), particularly at minimal (coastline) and maximal altitudes (Yasur culmination point, 390 m). While previous mapping relied mostly on low resolution DEMs and satellite images, the high precision of the DSM allows for a detailed structural analysis of the Yenkahe dome, notably based on the quantification of fault displacements. The new structural map, inferred from the 3D reconstruction and morphological analysis of the dome, reveals a complex pattern of faults and destabilization scars reflecting a succession of constructive and destructive events. Numerous landslide scars directed toward the sea highlight the probable occurrence of a tsunami event affecting the south-eastern coast of Tanna. Simulations of landslide-triggered tsunamis show the short time propagation of such a wave (1-2 min), which could affect coastal localities even following relatively small destabilized volumes (a few million cubic meters).

Structural MRI and Cognitive Correlates in Pest-Control Personnel from Gulf War I

DTIC Science & Technology

2010-04-01

Figure (ROCFT; Corwin & Blysma, 1993) Copying a complex geometric design; assess ability to organize and construct Raw Score...workstations at Boston University School of Medicine where they were reconstructed for morphometric analyses by the study imaging expert, Dr. Killiany...conventional structural MRI and morphometric analysis of K. Sullivan, Ph.D

Morphological and Ecological Characterization of Steinernema feltiae (Rhabditida: Steinernematidae) Rioja Strain Isolated from Bibio hortulanus (Diptera: Bibionidae) in Spain.

PubMed

Campos-Herrera, R; Escuer, M; Robertson, L; Gutiérrez, C

2006-03-01

A new strain of Steinernema feltiae (Rhabditida: Steinernematidae) was isolated in La Rioja (Spain) from larvae of Bibio hortulanus (Diptera: Bibionidae). A comparative morphometric analysis of this new strain and four additional S. feltiae isolates was performed. Although significant differences in morphometric measurements were observed, PCR-RFLP profiles and sequence analysis of the ITS region of rDNA confirmed the identity of the new strain as A2 RFLP type of S. feltiae. A comparative morphometric study among nematodes from three hosts, Galleria mellonella (Lepidoptera: Pyralidae), Spodoptera littoralis (Lepidoptera: Noctuidae) and B. hortulanus, was conducted. Ecological characterization of the Rioja isolate was performed in G. mellonella larvae. Larval mortality was 75.3 and 78.12% in penetration and sand column assays, respectively, and the percentage of penetrating infective juveniles was 12.0 and 2.8% in these assays. Larval mortality in the one-on-one bioassay was 4.2%, and in exposure-time bioassays, it was 50% at 11.25 hours. Relationships between morphometric characteristics and host mortality are discussed for this new strain of entomopathogenic nematode.

Geometric morphometrics and virtual anthropology: advances in human evolutionary studies.

PubMed

Rein, Thomas R; Harvati, Katerina

2014-01-01

Geometric morphometric methods have been increasingly used in paleoanthropology in the last two decades, lending greater power to the analysis and interpretation of the human fossil record. More recently the advent of the wide use of computed tomography and surface scanning, implemented in combination with geometric morphometrics (GM), characterizes a new approach, termed Virtual Anthropology (VA). These methodological advances have led to a number of developments in human evolutionary studies. We present some recent examples of GM and VA related research in human evolution with an emphasis on work conducted at the University of Tübingen and other German research institutions.

Bedrock Geologic Map of the Old Lyme Quadrangle, New London and Middlesex Counties, Connecticut

USGS Publications Warehouse

Walsh, Gregory J.; Scott, Robert B.; Aleinikoff, John N.; Armstrong, Thomas R.

2009-01-01

The bedrock geology of the Old Lyme quadrangle consists of Neoproterozoic and Permian gneisses and granites of the Gander and Avalon terranes, Silurian metasedimentary rocks of the Merrimack terrane, and Silurian to Devonian metasedimentary rocks of uncertain origin. The Avalon terrane rocks crop out within the Selden Neck block, and the Gander terrane rocks crop out within the Lyme dome. The Silurian to Devonian rocks crop out between these two massifs. Previous mapping in the Old Lyme quadrangle includes the work by Lawrence Lundgren, Jr. Lundgren's work provides an excellent resource for rock descriptions and detailed modal analyses of rock units that will not be duplicated in this current report. New research that was not covered in detail by Lundgren is the focus of this report and includes (1) evaluation of the rocks in the core of the Lyme dome in an effort to subdivide units in this area; (2) structural analysis of foliations and folds in and around the Lyme dome; (3) geochronology of selected units within the Lyme dome; and (4) analysis of joints and the fracture properties of the rocks.

Hydrological inferences through morphometric analysis of lower Kosi river basin of India for water resource management based on remote sensing data

NASA Astrophysics Data System (ADS)

Rai, Praveen Kumar; Chandel, Rajeev Singh; Mishra, Varun Narayan; Singh, Prafull

2018-03-01

Satellite based remote sensing technology has proven to be an effectual tool in analysis of drainage networks, study of surface morphological features and their correlation with groundwater management prospect at basin level. The present study highlights the effectiveness and advantage of remote sensing and GIS-based analysis for quantitative and qualitative assessment of flood plain region of lower Kosi river basin based on morphometric analysis. In this study, ASTER DEM is used to extract the vital hydrological parameters of lower Kosi river basin in ARC GIS software. Morphometric parameters, e.g., stream order, stream length, bifurcation ratio, drainage density, drainage frequency, drainage texture, form factor, circularity ratio, elongation ratio, etc., have been calculated for the Kosi basin and their hydrological inferences were discussed. Most of the morphometric parameters such as bifurcation ratio, drainage density, drainage frequency, drainage texture concluded that basin has good prospect for water management program for various purposes and also generated data base that can provide scientific information for site selection of water-harvesting structures and flood management activities in the basin. Land use land cover (LULC) of the basin were also prepared from Landsat data of 2005, 2010 and 2015 to assess the change in dynamic of the basin and these layers are very noteworthy for further watershed prioritization.

GIS based quantitative morphometric analysis and its consequences: a case study from Shanur River Basin, Maharashtra India

NASA Astrophysics Data System (ADS)

Pande, Chaitanya B.; Moharir, Kanak

2017-05-01

A morphometric analysis of Shanur basin has been carried out using geoprocessing techniques in GIS. These techniques are found relevant for the extraction of river basin and its drainage networks. The extracted drainage network was classified according to Strahler's system of classification and it reveals that the terrain exhibits dendritic to sub-dendritic drainage pattern. Hence, from the study, it is concluded that remote sensing data (SRTM-DEM data of 30 m resolution) coupled with geoprocessing techniques prove to be a competent tool used in morphometric analysis and evaluation of linear, slope, areal and relief aspects of morphometric parameters. The combined outcomes have established the topographical and even recent developmental situations in basin. It will also change the setup of the region. It therefore needs to analyze high level parameters of drainage and environment for suitable planning and management of water resource developmental plan and land resource development plan. The Shanur drainage basin is sprawled over an area of 281.33 km2. The slope of the basin varies from 1 to 10 %, and the slope variation is chiefly controlled by the local geology and erosion cycles. The main stream length ratio of the basin is 14.92 indicating that the study area is elongated with moderate relief and steep slopes. The morphometric parameters of the stream have been analyzed and calculated by applying standard methods and techniques viz. Horton (Trans Am Geophys Union 13:350-361, 1945), Miller (A quantitative geomorphologic study of drainage basin characteristics in the clinch mountain area, Virginia and Tennessee Columbia University, Department of Geology, Technical Report, No. 3, Contract N6 ONR 271-300, 1953), and Strahler (Handbook of applied hydrology, McGraw Hill Book Company, New York, 1964). GIS based on analysis of all morphometric parameters and the erosional development of the area by the streams has been progressed well beyond maturity and lithology is an influence in the drainage development. These studies are very useful for planning of rainwater harvesting and watershed management.

The early Pleistocene deciduous hominid molar FS-72 from the Sangiran Dome of Java, Indonesia: A taxonomic reappraisal based on its comparative endostructural characterization.

PubMed

Zanolli, Clément; Grine, Frederick E; Kullmer, Ottmar; Schrenk, Friedemann; Macchiarelli, Roberto

2015-08-01

Among the ten fossil hominid deciduous teeth reported so far from the Pleistocene sediments of the Sangiran Dome of Java are two isolated lower second molars: specimens PCG.2 from the Kabuh Formation and FS-72 from the Pucangan Formation. While PCG.2 appears to be certainly attributable to Homo erectus, FS-72 is somewhat more problematic, even though it is commonly listed within the Indonesian H. erectus hypodigm. Largely because of its large size, it was originally attributed to Meganthropus paleojavanicus. Subsequent study highlighted a set of metric and nonmetric crown features also found in Australopith and African early Homo (notably H. habilis) homologues. An additional problem with the taxonomic assignment of isolated teeth from the Pleistocene of Java is the presence of Pongo in these same deposits. To assess the taxonomic affinity of FS-72, we investigated its inner structure (tissue proportions and enamel-dentine junction morphology) by using techniques of 2-3D virtual imaging coupled with geometric morphometric analyses. The results show that FS-72 has thinner enamel compared to fossil and recent humans and that its topographic repartition more closely follows the pongine pattern. It also exhibits a Pongo-like elongated morphology of the enamel-dentine junction, with proportionally lower and mesiodistally spaced dentine horns. Given the morphological and metric similarities between fossil orangutan and H. erectus molars, we tested the hypothesis that its internal morphology more closely resembles the patterns evinced by PCG.2 and modern humans than Pongo. Accordingly, we consider that FS-72 more likely represents a dm2 of Pongo rather than Homo. © 2015 Wiley Periodicals, Inc.

Static analysis of a sonar dome rubber window

NASA Technical Reports Server (NTRS)

Lai, J. L.

1978-01-01

The application of NASTRAN (level 16.0.1) to the static analysis of a sonar dome rubber window (SDRW) was demonstrated. The assessment of the conventional model (neglecting the enclosed fluid) for the stress analysis of the SDRW was made by comparing its results to those based on a sophisticated model (including the enclosed fluid). The fluid was modeled with isoparametric linear hexahedron elements with approximate material properties whose shear modulus was much smaller than its bulk modulus. The effect of the chosen material property for the fluid is discussed.

A three-dimensional comparison of a morphometric and conventional cephalometric midsagittal planes for craniofacial asymmetry.

PubMed

Damstra, Janalt; Fourie, Zacharias; De Wit, Marnix; Ren, Yijin

2012-02-01

Morphometric methods are used in biology to study object symmetry in living organisms and to determine the true plane of symmetry. The aim of this study was to determine if there are clinical differences between three-dimensional (3D) cephalometric midsagittal planes used to describe craniofacial asymmetry and a true symmetry plane derived from a morphometric method based on visible facial features. The sample consisted of 14 dry skulls (9 symmetric and 5 asymmetric) with metallic markers which were imaged with cone-beam computed tomography. An error study and statistical analysis were performed to validate the morphometric method. The morphometric and conventional cephalometric planes were constructed and compared. The 3D cephalometric planes constructed as perpendiculars to the Frankfort horizontal plane resembled the morphometric plane the most in both the symmetric and asymmetric groups with mean differences of less than 1.00 mm for most variables. However, the standard deviations were often large and clinically significant for these variables. There were clinically relevant differences (>1.00 mm) between the different 3D cephalometric midsagittal planes and the true plane of symmetry determined by the visible facial features. The difference between 3D cephalometric midsagittal planes and the true plane of symmetry determined by the visible facial features were clinically relevant. Care has to be taken using cephalometric midsagittal planes for diagnosis and treatment planning of craniofacial asymmetry as they might differ from the true plane of symmetry as determined by morphometrics.

Directional asymmetry of upper limbs in a medieval population from Poland: A combination of linear and geometric morphometrics.

PubMed

Kubicka, Anna Maria; Lubiatowski, Przemysław; Długosz, Jan Dawid; Romanowski, Leszek; Piontek, Janusz

2016-11-01

Degrees of upper-limb bilateral asymmetry reflect habitual behavior and activity levels throughout life in human populations. The shoulder joint facilitates a wide range of combined motions due to the simultaneous motion of all three bones: clavicle, scapula, and humerus. Accordingly, we used three-dimensional geometric morphometrics to analyze shape differences in the glenoid cavity and linear morphometrics to obtain the degree of directional asymmetry in a medieval population. To calculate directional asymmetry, clavicles, humeri, and scapulae from 100 individuals (50 females, 50 males) were measured. Landmarks and semilandmarks were placed within a three-dimensional reconstruction of the glenoid cavity for analysis of shape differences between sides of the body within sexes. Linear morphometrics showed significant directional asymmetry in both sexes in all bones. Geometric morphometrics revealed significant shape differences of the glenoid cavity between sides of the body in females but not in males. Both indicators of directional asymmetry (%DA and %AA) did not show significant differences between sexes. PLS analysis revealed a significant correlation between glenoid shape and two humeral head diameters only in females on the left side of the body. The studied population, perhaps due to a high level of activity, exhibited slightly greater upper-limb bone bilateral asymmetry than other agricultural populations. Results suggest that the upper limbs were involved in similar activity patterns in both sexes but were characterized by different habitual behaviors. To obtain comprehensive results, studies should be based on sophisticated methods such as geometric morphometrics as well as standard measurements. Am. J. Hum. Biol. 28:817-824, 2016. © 2016Wiley Periodicals, Inc. © 2016 Wiley Periodicals, Inc.

Statistical forecasting of repetitious dome failures during the waning eruption of Redoubt Volcano, Alaska, February-April 1990

USGS Publications Warehouse

Page, R.A.; Lahr, J.C.; Chouet, B.A.; Power, J.A.; Stephens, C.D.

1994-01-01

The waning phase of the 1989-1990 eruption of Redoubt Volcano in the Cook Inlet region of south-central Alaska comprised a quasi-regular pattern of repetitious dome growth and destruction that lasted from February 15 to late April 1990. The dome failures produced ash plumes hazardous to airline traffic. In response to this hazard, the Alaska Volcano Observatory sought to forecast these ash-producing events using two approaches. One approach built on early successes in issuing warnings before major eruptions on December 14, 1989 and January 2, 1990. These warnings were based largely on changes in seismic activity related to the occurrence of precursory swarms of long-period seismic events. The search for precursory swarms of long-period seismicity was continued through the waning phase of the eruption and led to warnings before tephra eruptions on March 23 and April 6. The observed regularity of dome failures after February 15 suggested that a statistical forecasting method based on a constant-rate failure model might also be successful. The first statistical forecast was issued on March 16 after seven events had occurred, at an average interval of 4.5 days. At this time, the interval between dome failures abruptly lengthened. Accordingly, the forecast was unsuccessful and further forecasting was suspended until the regularity of subsequent failures could be confirmed. Statistical forecasting resumed on April 12, after four dome failure episodes separated by an average of 7.8 days. One dome failure (April 15) was successfully forecast using a 70% confidence window, and a second event (April 21) was narrowly missed before the end of the activity. The cessation of dome failures after April 21 resulted in a concluding false alarm. Although forecasting success during the eruption was limited, retrospective analysis shows that early and consistent application of the statistical method using a constant-rate failure model and a 90% confidence window could have yielded five successful forecasts and two false alarms; no events would have been missed. On closer examination, the intervals between successive dome failures are not uniform but tend to increase with time. This increase attests to the continuous, slowly decreasing supply of magma to the surface vent during the waning phase of the eruption. The domes formed in a precarious position in a breach in the summit crater rim where they were susceptible to gravitational collapse. The instability of the February 15-April 21 domes relative to the earlier domes is attributed to reaming the lip of the vent by a laterally directed explosion during the major dome-destroying eruption of February 15, a process which would leave a less secure foundation for subsequent domes. ?? 1994.

The longevity of lava dome eruptions: analysis of the global DomeHaz database

NASA Astrophysics Data System (ADS)

Ogburn, S. E.; Wolpert, R.; Calder, E.; Pallister, J. S.; Wright, H. M. N.

2015-12-01

The likely duration of ongoing volcanic eruptions is a topic of great interest to volcanologists, volcano observatories, and communities near volcanoes. Lava dome forming eruptions can last from days to centuries, and can produce violent, difficult-to-forecast activity including vulcanian to plinian explosions and pyroclastic density currents. Periods of active dome extrusion are often interspersed with periods of relative quiescence, during which extrusion may slow or pause altogether, but persistent volcanic unrest continues. This contribution focuses on the durations of these longer-term unrest phases, hereafter eruptions, that include periods of both lava extrusion and quiescence. A new database of lava dome eruptions, DomeHaz, provides characteristics of 228 eruptions at 127 volcanoes; for which 177 have duration information. We find that while 78% of dome-forming eruptions do not continue for more than 5 years, the remainder can be very long-lived. The probability distributions of eruption durations are shown to be heavy-tailed and vary by magma composition. For this reason, eruption durations are modeled with generalized Pareto distributions whose governing parameters depend on each volcano's composition and eruption duration to date. Bayesian predictive distributions and associated uncertainties are presented for the remaining duration of ongoing eruptions of specified composition and duration to date. Forecasts of such natural events will always have large uncertainties, but the ability to quantify such uncertainty is key to effective communication with stakeholders and to mitigation of hazards. Projections are made for the remaining eruption durations of ongoing eruptions, including those at Soufrière Hills Volcano, Montserrat and Sinabung, Indonesia. This work provides a quantitative, transferable method and rationale on which to base long-term planning decisions for dome forming volcanoes of different compositions, regardless of the quality of an individual volcano's eruptive record, by leveraging a global database.

Tissue Tracking: Applications for Brain MRI Classification

DTIC Science & Technology

2007-01-01

General Hospital, Center for Morphometric Analysis.10,11 The IBSR data-sets are T1-weighted, 3D coronal brain scans after having been positionally...learned priors,” Image Processing, IEEE Transactions on 9(2), pp. 299–301, 2000. 5. P. Olver, G. Sapiro, and A. Tannenbaum, “Invariant Geometric Evolutions...MRI,” NeuroImage 22(3), pp. 1060–1075, 2004. 16. A. Zijdenbos, B. Dawant, R. Margolin, and A. Palmer, “ Morphometric analysis of white matter lesions in

Pandora Fretum Crater

NASA Technical Reports Server (NTRS)

2002-01-01

[figure removed for brevity, see original site] (Released 26 July 2002) Another in a series of craters with unusual interior deposits, this THEMIS image shows an unnamed crater in the southern hemisphere Pandora Fretum region near the Hellas Basin. Craters with eroded layered deposits are quite common on Mars but the crusty textured domes in the center of the image make this crater more unusual. Looking vaguely like granitic intrusions, there erosional style is distinct from the rest of the interior deposit which shows a very obvious layered morphology. While it is unlikely that the domes are granite plutons, it is possible that they do represent some other shallowly emplaced magmatic intrusion. More likely still is that variations in induration of the layered deposit allow for variations in the erosional morphology. Note how the surface of the crater floor in the northernmost portion of the image has a texture similar to that of the domes. This may represent an incipient form of the erosion that has produced the domes but has not progressed as far. An analysis of other craters in the area may shed light on the origin of the domes.

Log analysis of six boreholes in conjunction with geologic characterization above and on top of the Weeks Island Salt Dome

DOE Office of Scientific and Technical Information (OSTI.GOV)

Sattler, A.R.

1996-06-01

Six boreholes were drilled during the geologic characterization and diagnostics of the Weeks Island sinkhole that is over the two-tiered salt mine which was converted for oil storage by the U.S. Strategic Petroleum Reserve. These holes were drilled to provide for geologic characterization of the Weeks Island Salt Dome and its overburden in the immediate vicinity of the sinkhole (mainly through logs and core); to establish a crosswell configuration for seismic tomography; to establish locations for hydrocarbon detection and tracer injection; and to provide direct observations of sinkhole geometry and material properties. Specific objectives of the logging program were to:more » (1) identify the top of and the physical state of the salt dome; (2) identify the water table; (3) obtain a relative salinity profile in the aquifer within the alluvium, which ranges from the water table directly to the top of the Weeks Island salt dome; and (4) identify a reflecting horizon seen on seismic profiles over this salt dome. Natural gamma, neutron, density, sonic, resistivity and caliper logs were run.« less

Morphometric magnetic resonance imaging and genetic testing in cerebellar abiotrophy in Arabian horses

PubMed Central

2013-01-01

Background Cerebellar abiotrophy (CA) is a rare but significant disease in Arabian horses caused by progressive death of the Purkinje cells resulting in cerebellar ataxia characterized by a typical head tremor, jerky head movements and lack of menace response. The specific role of magnetic resonance imaging (MRI) to support clinical diagnosis has been discussed. However, as yet MR imaging has only been described in one equine CA case. The role of MR morphometry in this regard is currently unknown. Due to the hereditary nature of the disease, genetic testing can support the diagnosis of CA. Therefore, the objective of this study was to perform MR morphometric analysis and genetic testing in four CA-affected Arabian horses and one German Riding Pony with purebred Arabian bloodlines in the third generation. Results CA was diagnosed pathohistologically in the five affected horses (2 months - 3 years) supported by clinical signs, necropsy, and genetic testing which confirmed the TOE1:g.2171G>A SNP genotype A/A in all CA-affected horses. On MR images morphometric analysis of the relative cerebellar size and relative cerebellar cerebrospinal fluid (CSF) space were compared to control images of 15 unaffected horses. It was demonstrated that in MR morphometric analyses, CA affected horses displayed a relatively smaller cerebellum compared to the entire brain mass than control animals (P = 0.0088). The relative cerebellar CSF space was larger in affected horses (P = 0.0017). Using a cut off value of 11.0% for relative cerebellar CSF space, the parameter differentiated between CA-affected horses and controls with a sensitivity of 100% and a specificity of 93.3%. Conclusions In conclusion, morphometric MRI and genetic analysis could be helpful to support the diagnosis of CA in vivo. PMID:23702154

Reviewing the upper Pleistocene human footprints from the 'Sala dei Misteri' in the Grotta della Bàsura (Toirano, northern Italy) cave: An integrated morphometric and morpho-classificatory approach

NASA Astrophysics Data System (ADS)

Paolo Citton; Romano, Marco; Salvador, Isabella; Avanzini, Marco

2017-08-01

About thirty human footprints made approximately 12,000 years B.P. inside the 'Sala dei Misteri' Cave of Básura near Toirano, Liguria, northern Italy, were studied by standard ichnological analysis. Eleven of the best-preserved tracks were examined further using morpho-classificatory and morphometric approaches, in order to estimate the minimum number of trackmakers; biometric measurements were also used to tentatively determine their physical characteristics (e.g., height and age). Results indicate at least three different producers, two youths and the third of tender age. Analysis of the data demonstrate the power of 3D, of landmark-based morphometrics, and the utility of methods of forensic anthropology in the determination of human footprints. The study of the number of trackmakers using the principal component analysis (PCA) on 'multi-trampling' surfaces could represent a model in the ichnological study of cave sites.

Differences in wing morphometrics of Lymantria dispar (Lepidoptera: Erebidae) between populations that vary in female flight capability

Treesearch

Juan Shi; Fang Chen; Melody A. Keena

2015-01-01

All male gypsy moths, Lymantria dispar L., are capable of strong directed flight, but flight in females varies, increasing from west to east geographically across Eurasia. To better understand how the wings differ between female flight capable and flightless strains, a wing morphometric analysis of 821 gypsy moths from eight geographic strains (three...

Structural MRI and Cognitive Correlates in Pest-control Personnel from Gulf War I

DTIC Science & Technology

2009-04-01

Medicine where they will be reconstructed for morphometric analyses by the study imaging expert, Dr. Killiany. All the images will be transferred to... geometric design; assess ability to organize and construct Raw Score...MRI and morphometric analysis of the images. The results of the current study will be able to compare whether brain imaging differences exist

The myocardial microangiopathy in human and experimental diabetes mellitus. (A microscopic, ultrastructural, morphometric and computer-assisted symbolic-logic analysis).

PubMed

Taşcă, C; Stefăneanu, L; Vasilescu, C

1986-01-01

The following microscopical aspects were found in the small intramural arteries in the myocardium of 30 diabetic patients: endothelial proliferations with focal protuberances leading to partial narrowing of the lumen, increased thickness of the arterial wall due to fibrosis and accumulations of neutral mucopolysaccharides: alteration of elastic fibres. Morphometrically, the arterial wall thickness and the arterial diameter were increased whereas the arterial density decreased in the diabetic heart. In 25 rats with streptozotocin-induced diabetes the small intramyocardial arteries were investigated at 11 to 40 weeks of diabetic state. Using morphometrical analysis a constant increase of arterial wall thickness paralleling the diabetes duration was found. Microscopically, the lesions consist in endothelial proliferation with bridging across the vascular lumen and slight perivascular and diffuse fibrosis. Ultrastructurally, the capillary basal lamina was thickened in the diabetic myocardium. In order to investigate the morphometrical data we used symbolic-logic as a decision method, by applying an original computer program based on the Quine-McCluskey algorithm. All our results together with the final symbolic-logic expression suggest that damage of the small intramyocardial arteries plays an important role in the pathogenesis of diabetic cardiomyopathy.

Morphometric changes in boar spermatozoa induced by cryopreservation.

PubMed

García-Herreros, M; Barón, F J; Aparicio, I M; Santos, A J; García-Marín, L J; Gil, M C

2008-09-01

Computer-assisted sperm morphometry analysis was used to determine the effects of cryopreservation on boar sperm head and midpiece morphometry. Sperm-rich fractions were collected from five mature boars. Three microscope slides were prepared from single extended sperm samples prior freezing and post-thawing. All slides were stained with Hemacolor, and 250 sperm images were obtained from each slide. The sperm head dimensions for length, width, area, perimeter and four shape factors and sperm-midpiece dimensions for area, width, angle and distance were determined in each spermatozoa. The effects of sperm freezing on sperm dimensions within and among boars were determined. A previous discriminant analysis of the results was able to correctly classify a 78.3 and 82% of fresh and frozen-thawed spermatozoa respectively. Sperm heads were significantly smaller in cryopreserved spermatozoa than in the companion extended samples for length, width, area and perimeter. Sperm midpieces were also significantly smaller in cryopreserved spermatozoa for width and area. The highest changes in morphometric dimensions after the freeze-thawing process were found in the midpiece of spermatozoa. The variability of morphometric measurements only was significantly different between fresh and thawed samples for head rugosity and midpiece area. The effects of cryopreservation on morphometric parameters were similar in the boars, which allow us to conclude that cryopreservation process does not have a different effect in each individual boar. In summary, morphometric changes associated with the cryopreservation process on boar spermatozoa do not apparently depends on an effect at individual level.

Medial prefrontal aberrations in major depressive disorder revealed by cytoarchitectonically informed voxel-based morphometry

PubMed Central

Bludau, Sebastian; Bzdok, Danilo; Gruber, Oliver; Kohn, Nils; Riedl, Valentin; Sorg, Christian; Palomero-Gallagher, Nicola; Müller, Veronika I.; Hoffstaedter, Felix; Amunts, Katrin; Eickhoff, Simon B.

2017-01-01

Objective The heterogeneous human frontal pole has been identified as a node in the dysfunctional network of major depressive disorder. The contribution of the medial (socio-affective) versus lateral (cognitive) frontal pole to major depression pathogenesis is currently unclear. The present study performs morphometric comparison of the microstructurally informed subdivisions of human frontal pole between depressed patients and controls using both uni- and multivariate statistics. Methods Multi-site voxel- and region-based morphometric MRI analysis of 73 depressed patients and 73 matched controls without psychiatric history. Frontal pole volume was first compared between depressed patients and controls by subdivision-wise classical morphometric analysis. In a second approach, frontal pole volume was compared by subdivision-naive multivariate searchlight analysis based on support vector machines. Results Subdivision-wise morphometric analysis found a significantly smaller medial frontal pole in depressed patients with a negative correlation of disease severity and duration. Histologically uninformed multivariate voxel-wise statistics provided converging evidence for structural aberrations specific to the microstructurally defined medial area of the frontal pole in depressed patients. Conclusions Across disparate methods, we demonstrated subregion specificity in the left medial frontal pole volume in depressed patients. Indeed, the frontal pole was shown to structurally and functionally connect to other key regions in major depression pathology like the anterior cingulate cortex and the amygdala via the uncinate fasciculus. Present and previous findings consolidate the left medial portion of the frontal pole as particularly altered in major depression. PMID:26621569

Conventional Gymnasium vs. Geodesic Field House. A Comparative Study of High School Physical Education and Assembly Facilities.

ERIC Educational Resources Information Center

Educational Facilities Labs., Inc., New York, NY.

A description is presented of the design features of a high school's geodesic dome field house. Following consideration of various design features and criteria for the physical education facility, a comprehensive analysis is given of comparative costs of a geodesic dome field house and conventional gymnasium. On the basis of the study it would…

Digital Photogrammetry for the Geometrical Analysis of the Umbrella-Shaped Dome in Baia (naples)

NASA Astrophysics Data System (ADS)

Aliberti, L.; Alonso-Rodríguez, M. Á.

2018-05-01

This paper is focused on the use of photogrammetric measurement techniques for the valorization of architectural and archaeological heritage. The functionality of this system allows operating with unfavourable conditions and pursues the accuracy of the measurement. This case of study presents a complex situation. Currently half part of the octagonal room annexed to the Temple of Mercury in Baia is underwater. Moreover the level of water may grow due to the characteristic movement of the soil in this area. The accuracy of photogrammetric method and the high definition of the camera used for the photo captures allow the reconstruction of the interior of the dome. The particular geometry of this surface stresses the relevance of a complete documentation of the dome. The research describes the method and tools used to realize this survey in difficult conditions and then analyze the geometry of the interior of the dome. In order to develop the geometrical analysis we carried on a series of operations on the point cloud and the survey model. The study of the photogrammetric model and the construction of an ideal model based on geometrical laws generate useful material to understand this complex vault.

Software For Design And Analysis Of Tanks And Cylindrical Shells

NASA Technical Reports Server (NTRS)

Luz, Paul L.; Graham, Jerry B.

1995-01-01

Skin-stringer Tank Analysis Spreadsheet System (STASS) computer program developed for use as preliminary design software tool that enables quick-turnaround design and analysis of structural domes and cylindrical barrel sections in propellant tanks or other cylindrical shells. Determines minimum required skin thicknesses for domes and cylindrical shells to withstand material failure due to applied pressures (ullage and/or hydrostatic) and runs buckling analyses on cylindrical shells and skin-stringers. Implemented as workbook program, using Microsoft Excel v4.0 on Macintosh II. Also implemented using Microsoft Excel v4.0 for Microsoft Windows v3.1 IBM PC.

Morphometric computer-assisted image analysis of epithelial cells in different grades of oral squamous cell carcinoma.

PubMed

Ananjan, Chatterjee; Jyothi, Mahadesh; Laxmidevi, B L; Gopinathan, Pillai Arun; Nazir, Salroo Humaira; Pradeep, L

2018-01-01

Oral squamous cell carcinoma (OSCC) accounts 94% of all malignant lesions in the oral cavity. In the assessment of OSCC, nowadays the WHO grading system has been followed widely but due to its subjectivity, investigators applied the sophisticated technique of computer-assisted image analysis in the grading of carcinoma in larynx, lungs, esophagus, and cervix to make it more objective. Access, analyze, and compare the cellular area (CA); cytoplasmic area (Cyt A); nuclear area (NA); nuclear perimeter (NP); nuclear form factor (NF); and nuclear-cytoplasmic ratio (N/C) of the cells in different grades of OSCC. Fifty OSCC cases were obtained and stained with hematoxylin and eosin which were graded according to the WHO classification. The sections were subjected to morphometric analysis to analyze all the morphometric parameters in different grades of OSCC and subjected to one-way ANOVA statistical analysis. CA and Cyt A decreased from normal mucosa with dedifferentiation of OSCC. The NA and NP increased in carcinoma group when compared to normal mucosa but decreased with dedifferentiation of OSCC (P < 0.05). NF had no significance with normal mucosa and different grades of OSCC (P > 0.05), while N/C ratio increased from normal mucosa through increasing grades of OSCC, reaching the highest value in poorly differentiated squamous cell carcinoma (P < 0.05). Both cellular and nuclear variables provide a more accurate indication of tumor aggressiveness than any single parameter. Morphometric analysis can be a reliable tool to determine objectively the degree of malignancy at the invasive tumor front.

Application of automatic image analysis for morphometric studies of peroxisomes stained cytochemically for catalase. II. Light-microscopic application.

PubMed

Beier, K; Fahimi, H D

1987-01-01

The feasibility of the application of a television-based image analyzer, the Texture Analysis System (TAS, Leitz Wetzlar, FRG) in conjunction with a light microscope for morphometric studies of hepatic peroxisomes has been investigated. Rat liver peroxisomes were stained with the alkaline-DAB method for localization of catalase and semithin (0.25 and 1 micron) sections of plastic-embedded material were examined under an oil immersion objective. The TAS detected the peroxisomal profiles selectively and determined their morphometric parameters automatically. The same parameters were obtained also by morphometric analysis of electron micrographs from the same material. The volume density of peroxisomes determined by TAS in semithin sections of normal liver, after correction for section thickness, is quite close to the corresponding value obtained by morphometry of electron micrographs. The difference is approximately 20%. In animals treated with the hypolipidemic drug bezafibrate, which causes proliferation of peroxisomes, TAS detected readily the increase in volume density of peroxisomes in semithin sections. In comparison with electron microscopy, however, the light-microscopic approach seems to underestimate the proliferation. The lower resolution of the light microscope and overlapping of neighbouring particles in relatively thick sections used for light-microscopic analysis may account for the differences. The present study has demonstrated the usefulness of automatic image analysis in conjunction with selective cytochemical staining of peroxisomes for morphometry of this organelle in rat liver. The light-microscopic approach is not only faster but is also extremely economical by obviating the use of an electron microscope.

Comprehensive evolutionary analysis of the Anthroherpon radiation (Coleoptera, Leiodidae, Leptodirini).

PubMed

Njunjić, Iva; Perrard, Adrien; Hendriks, Kasper; Schilthuizen, Menno; Perreau, Michel; Merckx, Vincent; Baylac, Michel; Deharveng, Louis

2018-01-01

The genus Anthroherpon Reitter, 1889 exhibits the most pronounced troglomorphic characters among Coleoptera, and represents one of the most spectacular radiations of subterranean beetles. However, radiation, diversification, and biogeography of this genus have never been studied in a phylogenetic context. This study provides a comprehensive evolutionary analysis of the Anthroherpon radiation, using a dated molecular phylogeny as a framework for understanding Anthroherpon diversification, reconstructing the ancestral range, and exploring troglomorphic diversity. Based on 16 species and 22 subspecies, i.e. the majority of Anthroherpon diversity, we reconstructed the phylogeny using Bayesian analysis of six loci, both mitochondrial and nuclear, comprising a total of 4143 nucleotides. In parallel, a morphometric analysis was carried out with 79 landmarks on the body that were subjected to geometric morphometrics. We optimized morphometric features to phylogeny, in order to recognize the way troglomorphy was expressed in different clades of the tree, and did character evolution analyses. Finally, we reconstructed the ancestral range of the genus using BioGeoBEARS. Besides further elucidating the suprageneric classification of the East-Mediterranean Leptodirini, our main findings also show that Anthroherpon dates back to the Early Miocene (ca. 22 MYA) and that the genus diversified entirely underground. Biogeographic reconstruction of the ancestral range shows the origin of the genus in the area comprising three high mountains in western Montenegro, which is in the accordance with the available data on the paleogeography of the Balkan Peninsula. Character evolution analysis indicates that troglomorphic morphometric traits in Anthroherpon mostly evolve neutrally but may diverge adaptively under syntopic competition.

Morphological and immunohistochemical analysis of apoptosis in the cerebellum of rats subjected to focal cerebral ischemia with or without alcoholism model.

PubMed

Carvalho, Camila Albuquerque Melo de; Tirapelli, Daniela Pretti da Cunha; Rodrigues, Andressa Romualdo; Lizarte, Fermino Sanches; Novais, Paulo Cézar; Silva, Jairo Pinheiro; Carlotti, Carlos Gilberto; Colli, Benedicto Oscar; Tirapelli, Luís Fernando

2016-09-01

To evaluated histopathological changes, morphometric and expression of proteins CASPASE-3, BCL-2 and XIAP related to apoptosis in the cerebellum after induction of temporary focal cerebral ischemia followed by reperfusion, with or without a model of chronic alcoholism. Fifty Wistar rats were used and divided into: control group (C), sham group (S), ischemic group (I), alcoholic group (A), and ischemic and alcoholic group (IA). The cerebellum samples collected were stained for histopathological and morphometric analysis and immunohistochemistry study. Histopathological changes were observed a greater degree in animals in groups A and IA. The morphometric study showed no difference in the amount of cells in the granular layer of the cerebellum between the groups. The expression of CASPASE-3 was higher than BCL-2 and XIAP in the groups A and IA. We observed correlation between histopathological changes and the occurrence of apoptosis in cerebellar cortex.

An Expanded Combined Evidence Approach to the Gavialis Problem Using Geometric Morphometric Data from Crocodylian Braincases and Eustachian Systems

PubMed Central

Gold, Maria Eugenia Leone; Brochu, Christopher A.; Norell, Mark A.

2014-01-01

The phylogenetic position of the Indian gharial (Gavialis gangeticus) is disputed - morphological characters place Gavialis as the sister to all other extant crocodylians, whereas molecular and combined analyses find Gavialis and the false gharial (Tomistoma schlegelii) to be sister taxa. Geometric morphometric techniques have only begun to be applied to this issue, but most of these studies have focused on the exterior of the skull. The braincase has provided useful phylogenetic information for basal crurotarsans, but has not been explored for the crown group. The Eustachian system is thought to vary phylogenetically in Crocodylia, but has not been analytically tested. To determine if gross morphology of the crocodylian braincase proves informative to the relationships of Gavialis and Tomistoma, we used two- and three-dimensional geometric morphometric approaches. Internal braincase images were obtained using high-resolution computerized tomography scans. A principal components analysis identified that the first component axis was primarily associated with size and did not show groupings that divide the specimens by phylogenetic affinity. Sliding semi-landmarks and a relative warp analysis indicate that a unique Eustachian morphology separates Gavialis from other extant members of Crocodylia. Ontogenetic expansion of the braincase results in a more dorsoventrally elongate median Eustachian canal. Changes in the shape of the Eustachian system do provide phylogenetic distinctions between major crocodylian clades. Each morphometric dataset, consisting of continuous morphological characters, was added independently to a combined cladistic analysis of discrete morphological and molecular characters. The braincase data alone produced a clade that included crocodylids and Gavialis, whereas the Eustachian data resulted in Gavialis being considered a basally divergent lineage. When each morphometric dataset was used in a combined analysis with discrete morphological and molecular characters, it generated a tree that matched the topology of the molecular phylogeny of Crocodylia. PMID:25198124

A vibration-based health monitoring program for a large and seismically vulnerable masonry dome

NASA Astrophysics Data System (ADS)

Pecorelli, M. L.; Ceravolo, R.; De Lucia, G.; Epicoco, R.

2017-05-01

Vibration-based health monitoring of monumental structures must rely on efficient and, as far as possible, automatic modal analysis procedures. Relatively low excitation energy provided by traffic, wind and other sources is usually sufficient to detect structural changes, as those produced by earthquakes and extreme events. Above all, in-operation modal analysis is a non-invasive diagnostic technique that can support optimal strategies for the preservation of architectural heritage, especially if complemented by model-driven procedures. In this paper, the preliminary steps towards a fully automated vibration-based monitoring of the world’s largest masonry oval dome (internal axes of 37.23 by 24.89 m) are presented. More specifically, the paper reports on signal treatment operations conducted to set up the permanent dynamic monitoring system of the dome and to realise a robust automatic identification procedure. Preliminary considerations on the effects of temperature on dynamic parameters are finally reported.

A morphometric analysis of cellular differentiation in caps of primary and lateral roots of Helianthus annuus

NASA Technical Reports Server (NTRS)

Moore, R.

1985-01-01

In order to determine if patterns of cell differentiation are similar in primary and lateral roots, I performed a morphometric analysis of the ultrastructure of calyptrogen, columella, and peripheral cells in primary and lateral roots of Helianthus annuus. Each cell type is characterized by a unique ultrastructure, and the ultrastructural changes characteristic of cellular differentiation in root caps are organelle specific. No major structural differences exist in the structures of the composite cell types, or in patterns of cell differentiation in caps of primary vs. lateral roots.

Effect of Calcium Phosphate Coating and rhBMP-2 on Bone Regeneration in Rabbit Calvaria Using Poly(propylene fumarate) Scaffolds

DTIC Science & Technology

2015-01-07

algorithm [30] applied across all the samples to minimize error. Morphometric analysis was carried out on CT images using CTanalyzer v. 1.4 (Bruker...remaining of 8.1 ± 1.0% was observed for uncoated PPF. 3.2. Scaffold micro-CT evaluation 3-D reconstructions of all scaffolds showed good geometric con...scaffolds. Within the single central histological cross-section, morphometric analysis indicated that the SBM scaffolds loaded with rhBMP-2 (50 and 100 lg

The effect of diabetes on bone formation following application of the GBR principle with the use of titanium domes.

PubMed

Lee, Sang-Bok; Retzepi, Maria; Petrie, Aviva; Hakimi, Ahmad-Reza; Schwarz, Frank; Donos, Nikolaos

2013-01-01

The aim of the study was to evaluate the effect of experimental diabetes and metabolic control on de novo bone formation following the GBR principle under titanium dome with a hydrophobic or hydrophilic surface. Three groups of equal number of randomly allocated Wistar strain rats were created: (a) uncontrolled, streptozotocin-induced diabetes (D); (b) insulin-controlled diabetes (CD); (c) healthy (H). Each group was then further divided into two groups according to either 7 or 42 days of healing period, which received either a hydrophobic (SLA: A) or a hydrophilic (SLActive: B) dome. The undecalcified sections were evaluated by qualitative and quantitative histological analysis and the differences between means for the groups (D, CD, and H) and the type of domes (SLA and SLActive) at each of two observational periods (i.e. 7 and 42 days) were assessed by performing a two-way analysis of variance (ANOVA). In all experimental groups, significant de novo bone formation under the domes was observed at 42 days of healing. There was a tendency of increased new total bone (TB) formation in H and CD groups compared to D group at 42 days of healing. Also, the SLActive titanium surface showed a trend of promoting superior TB formation at the early observational period among the experimental groups, however these differences did not reach statistical significance. In regards to the bone-to-implant contact (BIC%) under the both dome treatments (SLA and SLActive), there was no statistically significant difference among the H, CD, and D groups at both 7 and 42 days. Despite of the presence of uncontrolled diabetes, substantial de novo bone formation can be achieved in titanium domes with a hydrophobic and a hydrophilic surface. The use of SLActive titanium surface may present a tendency to promote new bone formation in healthy and diabetic conditions at 7 days of healing, however the obtained data do not allow any robust conclusions. © 2012 John Wiley & Sons A/S.

Morphometric information to reduce the semantic gap in the characterization of microscopic images of thyroid nodules.

PubMed

Macedo, Alessandra A; Pessotti, Hugo C; Almansa, Luciana F; Felipe, Joaquim C; Kimura, Edna T

2016-07-01

The analyses of several systems for medical-imaging processing typically support the extraction of image attributes, but do not comprise some information that characterizes images. For example, morphometry can be applied to find new information about the visual content of an image. The extension of information may result in knowledge. Subsequently, results of mappings can be applied to recognize exam patterns, thus improving the accuracy of image retrieval and allowing a better interpretation of exam results. Although successfully applied in breast lesion images, the morphometric approach is still poorly explored in thyroid lesions due to the high subjectivity thyroid examinations. This paper presents a theoretical-practical study, considering Computer Aided Diagnosis (CAD) and Morphometry, to reduce the semantic discontinuity between medical image features and human interpretation of image content. The proposed method aggregates the content of microscopic images characterized by morphometric information and other image attributes extracted by traditional object extraction algorithms. This method carries out segmentation, feature extraction, image labeling and classification. Morphometric analysis was included as an object extraction method in order to verify the improvement of its accuracy for automatic classification of microscopic images. To validate this proposal and verify the utility of morphometric information to characterize thyroid images, a CAD system was created to classify real thyroid image-exams into Papillary Cancer, Goiter and Non-Cancer. Results showed that morphometric information can improve the accuracy and precision of image retrieval and the interpretation of results in computer-aided diagnosis. For example, in the scenario where all the extractors are combined with the morphometric information, the CAD system had its best performance (70% of precision in Papillary cases). Results signalized a positive use of morphometric information from images to reduce semantic discontinuity between human interpretation and image characterization. Copyright © 2016 Elsevier Ireland Ltd. All rights reserved.

Susceptibility of lava domes to erosion and collapse by toppling on cooling joints

NASA Astrophysics Data System (ADS)

Smith, John V.

2018-01-01

The shape of lava domes typically leads to the formation of radial patterns of cooling joints. These cooling joints define the orientation of the columnar blocks which plunge toward the center of the dome. In the lower parts of the dome the columns plunge into the dome at low angles and are relatively stable. Higher in the dome the columns plunge into the dome at steep angles. These steeply plunging columns are susceptible to toppling and, if the lower part of a dome is partially removed by erosion or collapse, the unstable part of the dome becomes exposed leading to toppling failure. Examples of this process are provided from coastal erosion of lava domes at Katsura Island, Shimane Peninsula, western Japan. An analogue model is presented to demonstrate the mechanism. It is proposed that the mechanism can contribute to collapse of lava domes during or after emplacement.

Quantification of Runoff as Influenced by Morphometric Characteristics in a Rural Complex Catchment

NASA Astrophysics Data System (ADS)

Abdulkareem, Jabir Haruna; Pradhan, Biswajeet; Sulaiman, Wan Nor Azmin; Jamil, Nor Rohaizah

2018-05-01

This study addresses the critical scientific question of assessing the relationship between morphometric features and the hydrological factors that increase the risk of flooding in Kelantan River basin, Malaysia. Two hypotheses were developed to achieve this aim, namely: the alternate hypothesis (runoff, is influenced by morphometric characteristics in the study watershed) and the null hypothesis (runoff is not influenced by morphometric characteristics). First, the watershed was delineated into four major catchments, namely: Galas, Pergau, Lebir, and Nenggiri. Next, quantitative morphometric characters such as linear aspects, areal aspects, and relief aspects were determined on each of these catchments. Furthermore, HEC-HMS and flood response analyses were employed to simulate the hydrological response of the catchments. From the results of morphometric analysis, profound spatial changes were observed between runoff features of Kelantan River and the morphometric characteristics. The length of overflow that was related to drainage density and constant channel maintenance was found to be 0.12 in Pergau, 0.04 in both Nenggiri and Lebir, and 0.03 in Galas. Drainage density as influenced by geology and vegetation density was found to be low in all the catchments (0.07-0.24). Results of hydrological response indicated that Lebir, Nenggiri, Galas, and Pergau recorded a flood response factor of 0.75, 0.63, 0.40, and 0.05, respectively. Therefore, Lebir and Nenggiri are more likely to be flooded during a rainstorm. There was no clear indication with regard to the catchment that emerged as the most prevailing in all the morphological features. Hence, the alternate hypothesis was affirmed. This study can be replicated in other catchments with different hydrologic setup.

Quantification of Runoff as Influenced by Morphometric Characteristics in a Rural Complex Catchment

NASA Astrophysics Data System (ADS)

Abdulkareem, Jabir Haruna; Pradhan, Biswajeet; Sulaiman, Wan Nor Azmin; Jamil, Nor Rohaizah

2018-03-01

This study addresses the critical scientific question of assessing the relationship between morphometric features and the hydrological factors that increase the risk of flooding in Kelantan River basin, Malaysia. Two hypotheses were developed to achieve this aim, namely: the alternate hypothesis (runoff, is influenced by morphometric characteristics in the study watershed) and the null hypothesis (runoff is not influenced by morphometric characteristics). First, the watershed was delineated into four major catchments, namely: Galas, Pergau, Lebir, and Nenggiri. Next, quantitative morphometric characters such as linear aspects, areal aspects, and relief aspects were determined on each of these catchments. Furthermore, HEC-HMS and flood response analyses were employed to simulate the hydrological response of the catchments. From the results of morphometric analysis, profound spatial changes were observed between runoff features of Kelantan River and the morphometric characteristics. The length of overflow that was related to drainage density and constant channel maintenance was found to be 0.12 in Pergau, 0.04 in both Nenggiri and Lebir, and 0.03 in Galas. Drainage density as influenced by geology and vegetation density was found to be low in all the catchments (0.07-0.24). Results of hydrological response indicated that Lebir, Nenggiri, Galas, and Pergau recorded a flood response factor of 0.75, 0.63, 0.40, and 0.05, respectively. Therefore, Lebir and Nenggiri are more likely to be flooded during a rainstorm. There was no clear indication with regard to the catchment that emerged as the most prevailing in all the morphological features. Hence, the alternate hypothesis was affirmed. This study can be replicated in other catchments with different hydrologic setup.

Sperm subpopulations in avian species: a comparative study between the rooster (Gallus domesticus) and Guinea fowl (Numida meleagris).

PubMed

García-Herreros, Manuel

2016-01-01

The main aims of this research were to study possible differences in objective morphometric sperm characteristics, establish normative sperm morphometry standards, and evaluate the presumed different subpopulation distribution of avian spermatozoa from the rooster (Gallus domesticus ) and Guinea fowl (Numida meleagris ) as model avian species. Seventy-two ejaculates (36 per species studied) were obtained manually, following a training period involving gently combined dorso-abdominal and lumbo-sacral massage of the birds. Ejaculates were processed for volume, sperm concentration, viability, motility, and morphology. Moreover, samples were submitted for sperm morphometric assessment using objective Computer-Assisted Semen Analysis for Morphometry (CASA-Morph) methods, with sperm morphometric descriptors evaluated by Principal Component Analysis (PCA) and multivariate clustering analyses. There were several differences observed between the avian species in values obtained for ejaculate volume and sperm concentration (P < 0.001). Irrespective of species, PCA revealed two Principal Components (PCs) explaining more than 80% of the variance. In addition, the number of subpopulations differed with species (three and five subpopulations for rooster and Guinea fowl, respectively). Moreover, the distribution of the sperm subpopulations was found to be structurally different between species. In conclusion, our findings from using CASA-Morph methods indicate pronounced sperm morphometric variation between these two avian species. Because of the strong differences observed in morphometric parameter values and their subpopulation distribution, these results suggest that application of objective analytical methods such as CASA-Morph could substantially improve the reliability of comparative studies and help establish valid normative sperm morphological values for avian species.

Sperm subpopulations in avian species: a comparative study between the rooster (Gallus domesticus) and Guinea fowl (Numida meleagris)

PubMed Central

García-Herreros, Manuel

2016-01-01

The main aims of this research were to study possible differences in objective morphometric sperm characteristics, establish normative sperm morphometry standards, and evaluate the presumed different subpopulation distribution of avian spermatozoa from the rooster (Gallus domesticus) and Guinea fowl (Numida meleagris) as model avian species. Seventy-two ejaculates (36 per species studied) were obtained manually, following a training period involving gently combined dorso-abdominal and lumbo-sacral massage of the birds. Ejaculates were processed for volume, sperm concentration, viability, motility, and morphology. Moreover, samples were submitted for sperm morphometric assessment using objective Computer-Assisted Semen Analysis for Morphometry (CASA-Morph) methods, with sperm morphometric descriptors evaluated by Principal Component Analysis (PCA) and multivariate clustering analyses. There were several differences observed between the avian species in values obtained for ejaculate volume and sperm concentration (P < 0.001). Irrespective of species, PCA revealed two Principal Components (PCs) explaining more than 80% of the variance. In addition, the number of subpopulations differed with species (three and five subpopulations for rooster and Guinea fowl, respectively). Moreover, the distribution of the sperm subpopulations was found to be structurally different between species. In conclusion, our findings from using CASA-Morph methods indicate pronounced sperm morphometric variation between these two avian species. Because of the strong differences observed in morphometric parameter values and their subpopulation distribution, these results suggest that application of objective analytical methods such as CASA-Morph could substantially improve the reliability of comparative studies and help establish valid normative sperm morphological values for avian species. PMID:27751988

Histopathological and Digital Morphometrical Evaluation of Uterine Leiomyoma in Brazilian Women

PubMed Central

da Silva, Ana Paula Fernandes; Mello, Luciano de Albuquerque; dos Santos, Erlene Roberta Ribeiro; Paz, Silvania Tavares; Cavalcanti, Carmelita Lima Bezerra; de Melo-Junior, Mario Ribeiro

2016-01-01

The current study aims to evaluate histopathological and digital morphometrical aspects associated with uterine leiomyomas in one hundred and fifty (150) patients diagnosed with leiomyoma. Uterine tissues were subjected to the histopathological and digital morphometric analyses of the interstitial collagen distribution. The analysis of medical records indicates that most of the women diagnosed with uterine leiomyomas (68.7%) are between 37 and 48 years old. As for the anatomic location of the tumors, approximately 61.4% of the patients had intramural and subserosal lesions. In 50% of the studied cases, the patients developed uterine leiomyomatosis (with more than eight tumors). As for the morphometric study, the average size of the interstitial collagen distribution held approximately 28.53% of the capture area, whereas it was of 7.43% in the normal tissue adjacent to the tumor. Another important aspect observed in the current study was the high rate of young women subjected to total hysterectomy, a fact that resulted in early and definitive sterility. PMID:27293441

Morphometric abnormalities of the lateral ventricles in methamphetamine-dependent subjects☆

PubMed Central

Jeong, Hyeonseok S.; Lee, Sunho; Yoon, Sujung; Jung, Jiyoung J.; Cho, Han Byul; Kim, Binna N.; Ma, Jiyoung; Ko, Eun; Im, Jooyeon Jamie; Ban, Soonhyun; Renshaw, Perry F.; Lyoo, In Kyoon

2017-01-01

Background The presence of morphometric abnormalities of the lateral ventricles, which can reflect focal or diffuse atrophic changes of nearby brain structures, is not well characterized in methamphetamine dependence. The current study was aimed to examine the size and shape alterations of the lateral ventricles in methamphetamine-dependent subjects. Methods High-resolution brain structural images were obtained from 37 methamphetamine-dependent subjects and 25 demographically matched healthy individuals. Using a combined volumetric and surface-based morphometric approach, the structural variability of the lateral ventricles, with respect to extent and location, was examined. Results Methamphetamine-dependent subjects had an enlarged right lateral ventricle compared with healthy individuals. Morphometric analysis revealed a region-specific pattern of lateral ventricular expansion associated with methamphetamine dependence, which was mainly distributed in the areas adjacent to the ventral striatum, medial prefrontal cortex, and thalamus. Conclusions Patterns of shape decomposition in the lateral ventricles may have relevance to the structural vulnerability of the prefrontal-ventral striatal-thalamic circuit to methamphetamine-induced neurotoxicity. PMID:23769159

Anthropometric Measurements Usage in Medical Sciences

PubMed Central

Utkualp, Nevin; Ercan, Ilker

2015-01-01

Morphometry is introduced as quantitative approach to seek information concerning variations and changes in the forms of organisms that described the relationship between the human body and disease. Scientists of all civilization, who existed until today, examined the human body using anthropometric methods. For these reasons, anthropometric data are used in many contexts to screen for or monitor disease. Anthropometry, a branch of morphometry, is the study of the size and shape of the components of biological forms and their variations in populations. Morphometrics can also be defined as the quantitative analysis of biological forms. The field has developed rapidly over the last two decades to the extent that we now distinguish between traditional morphometrics and the more recent geometric morphometrics. Advances in imaging technology have resulted in the protection of a greater amount of morphological information and have permitted the analysis of this information. The oldest and most commonly used of these methods is radiography. With developments in this area, CT and MRI have also been started to be used in screening of the internal organs. Morphometric measurements that are used in medicine, are widely used in the diagnosis and the follow-up and the treatment of the disease, today. In addition, in cosmetology use of these new measurements is increasing every day. PMID:26413519

Internal rib structure can be predicted using mathematical models: An anatomic study comparing the chest to a shell dome with application to understanding fractures.

PubMed

Casha, Aaron R; Camilleri, Liberato; Manché, Alexander; Gatt, Ruben; Attard, Daphne; Gauci, Marilyn; Camilleri-Podesta, Marie-Therese; Mcdonald, Stuart; Grima, Joseph N

2015-11-01

The human rib cage resembles a masonry dome in shape. Masonry domes have a particular construction that mimics stress distribution. Rib cortical thickness and bone density were analyzed to determine whether the morphology of the rib cage is sufficiently similar to a shell dome for internal rib structure to be predicted mathematically. A finite element analysis (FEA) simulation was used to measure stresses on the internal and external surfaces of a chest-shaped dome. Inner and outer rib cortical thickness and bone density were measured in the mid-axillary lines of seven cadaveric rib cages using computerized tomography scanning. Paired t tests and Pearson correlation were used to relate cortical thickness and bone density to stress. FEA modeling showed that the stress was 82% higher on the internal than the external surface, with a gradual decrease in internal and external wall stresses from the base to the apex. The inner cortex was more radio-dense, P < 0.001, and thicker, P < 0.001, than the outer cortex. Inner cortical thickness was related to internal stress, r = 0.94, P < 0.001, inner cortical bone density to internal stress, r = 0.87, P = 0.003, and outer cortical thickness to external stress, r = 0.65, P = 0.035. Mathematical models were developed relating internal and external cortical thicknesses and bone densities to rib level. The internal anatomical features of ribs, including the inner and outer cortical thicknesses and bone densities, are similar to the stress distribution in dome-shaped structures modeled using FEA computer simulations of a thick-walled dome pressure vessel. Fixation of rib fractures should include the stronger internal cortex. © 2015 Wiley Periodicals, Inc.

The Caldas Novas dome, central Brazil: structural evolution and implications for the evolution of the Neoproterozoic Brasília belt

NASA Astrophysics Data System (ADS)

D'el-Rey Silva, Luiz José Homem; Wolf Klein, Percy Boris; Walde, Detlef Hans-Gert

2004-10-01

The Caldas Novas dome (Goiaás state, central Brazil) lies in the southern segment of the Neoproterozoic Brasília belt (center of the Tocantins Province) between the Goiás magmatic arc and the margin of the ancient São Francisco plate. The core of the dome comprises rocks of the Meso-Neoproterozoic Paranoá group (passive margin psamitic-pelitic sediments and subgreenschist facies) covered by a nappe of the Neoproterozoic Araxá group (backarc basin pelitic-psamitic sediments and volcanics of greenschist facies, bitotite zone). Hot underground waters that emerge along fractures in the Paranoá quartzite and wells in the Araxá schist have made the Caldas Novas dome an international tourist attraction. A recent detailed structural analysis demonstrates that the dome area was affected by a D 1-D 3 Brasiliano cycle progressive deformation in the ˜750-600 Ma interval (published U-Pb and Sm-Nd data). During event D 1, a pervasive layer-parallel foliation developed coeval the regional metamorphism. Event D 2 (intense F 2 isoclinal folding) was responsible for the emplacement of the nappe. D 1 and D 2 record a regime of simple shear (top-to-SE relative regional movement) due to a WNW-ESE subhorizontal compression ( σ1). Event D 3 records a WSW-ENE compression, during which the dome rose as a large-scale F 3 fold, possibly associated with a duplex structure at depth. During the dome's uplift, the layers slid back and down in all directions, giving way to gravity-slide folds and an extensional crenulation cleavage. A set of brittle fractures and quartz veins constitutes the record of a late-stage D 4 event important for understanding the thermal water reservoir.

Investigation of Seismic Events associated with the Sinkhole at Napoleonville Salt Dome, Louisiana

NASA Astrophysics Data System (ADS)

Nayak, A.; Dreger, D. S.

2015-12-01

This study describes the ongoing efforts in analysis of the intense sequence of complex seismic events associated with the formation of a large sinkhole at Napoleonville Salt Dome, Assumption Parish, Louisiana in August 2012. Point source centroid seismic moment tensor (MT) inversion of these events using data from a temporary network of broadband stations established by the United States Geological Survey had previously revealed large volume-increase components. We investigate the effect of 3D velocity structure of the salt dome on wave propagation in the frequency range of interest (0.1-0.3 Hz) by forward modeling synthetic waveforms using MT solutions that were computed using Green's functions assuming two separate 1D velocity models for stations over the salt dome and stations on the sedimentary strata surrounding the salt dome separately. We also use a matched filter technique to detect smaller events that went undetected by the automated grid-search based scanning and MT inversion algorithm using the waveforms of the larger events as templates. We also analyze the change in spectral content of the events, many of which exhibit a spectral peak at 0.4 Hz with a duration of > 60 seconds. The decrease in spectral amplitudes with distance also gives an estimate of high anelastic attenuation that damps reverberations within the shallow low velocity layers. Finally, we use noise cross-correlation analysis to explore changes in the green's functions during the development of the sinkhole and verify the sediment velocity model by comparing observed and synthetic surface wave dispersion.

A semi-automatic method for analysis of landscape elements using Shuttle Radar Topography Mission and Landsat ETM+ data

NASA Astrophysics Data System (ADS)

Ehsani, Amir Houshang; Quiel, Friedrich

2009-02-01

In this paper, we demonstrate artificial neural networks—self-organizing map (SOM)—as a semi-automatic method for extraction and analysis of landscape elements in the man and biosphere reserve "Eastern Carpathians". The Shuttle Radar Topography Mission (SRTM) collected data to produce generally available digital elevation models (DEM). Together with Landsat Thematic Mapper data, this provides a unique, consistent and nearly worldwide data set. To integrate the DEM with Landsat data, it was re-projected from geographic coordinates to UTM with 28.5 m spatial resolution using cubic convolution interpolation. To provide quantitative morphometric parameters, first-order (slope) and second-order derivatives of the DEM—minimum curvature, maximum curvature and cross-sectional curvature—were calculated by fitting a bivariate quadratic surface with a window size of 9×9 pixels. These surface curvatures are strongly related to landform features and geomorphological processes. Four morphometric parameters and seven Landsat-enhanced thematic mapper (ETM+) bands were used as input for the SOM algorithm. Once the network weights have been randomly initialized, different learning parameter sets, e.g. initial radius, final radius and number of iterations, were investigated. An optimal SOM with 20 classes using 1000 iterations and a final neighborhood radius of 0.05 provided a low average quantization error of 0.3394 and was used for further analysis. The effect of randomization of initial weights for optimal SOM was also studied. Feature space analysis, three-dimensional inspection and auxiliary data facilitated the assignment of semantic meaning to the output classes in terms of landform, based on morphometric analysis, and land use, based on spectral properties. Results were displayed as thematic map of landscape elements according to form, cover and slope. Spectral and morphometric signature analysis with corresponding zoom samples superimposed by contour lines were compared in detail to clarify the role of morphometric parameters to separate landscape elements. The results revealed the efficiency of SOM to integrate SRTM and Landsat data in landscape analysis. Despite the stochastic nature of SOM, the results in this particular study are not sensitive to randomization of initial weight vectors if many iterations are used. This procedure is reproducible for the same application with consistent results.

Small explosive volcanic plume dynamics: insights from feature tracking velocimetry at Santiaguito lava dome

NASA Astrophysics Data System (ADS)

Benage, M. C.; Andrews, B. J.

2016-12-01

Volcanic explosions eject turbulent, transient jets of hot volcanic gas and particles into the atmosphere. Though the jet of hot material is initially negatively buoyant, the jet can become buoyant through entrainment and subsequent thermal expansion of entrained air that allows the eruptive plume to rise several kilometers. Although basic plume structure is qualitatively well known, the velocity field and dynamic structure of volcanic plumes are not well quantified. An accurate and quantitative description of volcanic plumes is essential for hazard assessments, such as if the eruption will form a buoyant plume that will affect aviation or produce dangerous pyroclastic density currents. Santa Maria volcano, in Guatemala, provides the rare opportunity to safely capture video of Santiaguito lava dome explosions and small eruptive plumes. In January 2016, two small explosions (< 2 km) that lasted several minutes and with little cloud obstruction were recorded for image analysis. The volcanic plume structure is analyzed through sequential image frames from the video where specific features are tracked using a feature tracking velocimetry (FTV) algorithm. The FTV algorithm quantifies the 2D apparent velocity fields along the surface of the plume throughout the duration of the explosion. Image analysis of small volcanic explosions allows us to examine the maximum apparent velocities at two heights above the dome surface, 0-25 meters, where the explosions first appear, and 100-125 meters. Explosions begin with maximum apparent velocities of <15 m/s. We find at heights near the dome surface and 10 seconds after explosion initiation, the maximum apparent velocities transition to sustained velocities of 5-15 m/s. At heights 100-125 meters above the dome surface, the apparent velocities transition to sustained velocities of 5-15 m/s after 25 seconds. Throughout the explosion, transient velocity maximums can exceed 40 m/s at both heights. Here, we provide novel quantification and description of turbulent surface velocity fields of explosive volcanic eruptions at active lava domes.

Fabric and texture at Siple Dome, Antarctica

USGS Publications Warehouse

Diprinzio, C.L.; Wilen, Lawrence A.; Alley, R.B.; Fitzpatrick, J.J.; Spencer, M.K.; Gow, A.J.

2005-01-01

Preferred c-axis orientations are present in the firn at Siple Dome, West Antarctica, and recrystallization begins as shallow as 200 m depth in ice below -20??C, based on digital analysis of c-axis fabrics, grain-sizes and other characteristics of 52 vertical thin sections prepared in the field from the kilometer-long Siple Dome ice core. The shallowest section analyzed, from 22 m, shows clustering of c axes toward the vertical. By 200 m depth, girdle fabric and other features of recrystallized ice are evident in layers (or regions), separated by layers (regions) of typically finer-grained ice lacking evidence of recrystallization. Ice from about 700-780 m depth, which was deposited during the last ice age, is especially fine-grained, with strongly vertical c axes, but deeper ice shows much larger crystals and strong evidence of recrystallization. Azimuthal asymmetry of some c-axis fabrics, trends in grain-size, and other indicators reveal additional information on processes and history of ice flow at Siple Dome.

Calculation of Thermally-Induced Displacements in Spherically Domed Ion Engine Grids

NASA Technical Reports Server (NTRS)

Soulas, George C.

2006-01-01

An analytical method for predicting the thermally-induced normal and tangential displacements of spherically domed ion optics grids under an axisymmetric thermal loading is presented. A fixed edge support that could be thermally expanded is used for this analysis. Equations for the displacements both normal and tangential to the surface of the spherical shell are derived. A simplified equation for the displacement at the center of the spherical dome is also derived. The effects of plate perforation on displacements and stresses are determined by modeling the perforated plate as an equivalent solid plate with modified, or effective, material properties. Analytical model results are compared to the results from a finite element model. For the solid shell, comparisons showed that the analytical model produces results that closely match the finite element model results. The simplified equation for the normal displacement of the spherical dome center is also found to accurately predict this displacement. For the perforated shells, the analytical solution and simplified equation produce accurate results for materials with low thermal expansion coefficients.

The touch dome defines an epidermal niche specialized for mechanosensory signaling

PubMed Central

Doucet, Yanne S.; Woo, Seung-Hyun; Ruiz, Marlon E.; Owens, David M.

2013-01-01

Summary In mammalian skin, Merkel cells are mechanoreceptor cells that are required for the perception of gentle touch. Recent evidence indicates that mature Merkel cells descend from the proliferative layer of skin epidermis; however, the stem cell niche for Merkel cell homeostasis has not been reported. Here, we provide the first genetic evidence for maintenance of mature Merkel cells during homeostasis by Krt17+ stem cells located in epidermal touch domes of hairy skin and in the tips of the rete ridges of glabrous skin. Lineage tracing analysis indicated that the entire pool of mature Merkel cells is turned over every 7–8 weeks in adult epidermis and that Krt17+ stem cells also maintain squamous differentiation in the touch dome and in glabrous skin. Finally, selective genetic ablation of Krt17+ touch dome keratinocytes indicates that these cells, and not mature Merkel cells, are primarily responsible for maintaining innervation of the Merkel cell-neurite complex. PMID:23727240

[Automated morphometric evaluation of the chromatin structure of liver cell nuclei after vagotomy].

PubMed

Butusova, N N; Zhukotskiĭ, A V; Sherbo, I V; Gribkov, E N; Dubovaia, T K

1989-05-01

The morphometric analysis of the interphase chromatine structure of the hepatic cells nuclei was carried out on the automated TV installation for the quantitative analysis of images "IBAS-2" (by the OPTON firm, the FRG) according to 50 optical and geometric parameters during various periods (1.2 and 4 weeks) after the vagotomy operation. It is determined that upper-molecular organisation of chromatine undergoes the biggest changes one week after operation, and changes of granular component are more informative than changes of the nongranular component (with the difference 15-20%). It was also revealed that chromatine components differ in tinctorial properties, which are evidently dependent on physicochemical characteristics of the chromatine under various functional conditions of the cell. As a result of the correlation analysis the group of morphometric indices of chromatine structure was revealed, which are highly correlated with level of transcription activity of chromatine during various terms after denervation. The correlation quotient of these parameters is 0.85-0.97. The summing up: vagus denervation of the liver causes changes in the morphofunctional organisation of the chromatine.

A Radar Survey of Lunar Dome Fields

NASA Technical Reports Server (NTRS)

Carter, Lynn M.; Campbell, Bruce A.; Hawke, B. Ray; Bussey, Ben

2011-01-01

The near side of the Moon has several areas with a high concentration of volcanic domes. These low relief structures are considerably different in morphology from terrestrial cinder cones, and some of the domes may be similar to some terrestrial shields formed through Hawaiian or Strombolian eruptions from a central pipe vent or small fissure [1]. The domes are evidence that some volcanic lavas were more viscous than the mare flood basalts that make up most of the lunar volcanic flows. It is still not known what types of volcanism lead to the creation of specific domes, or how much dome formation may have varied across the Moon. Prior work has shown that some domes have unusual radar polarization characteristics that may indicate a surface or subsurface structure that is different from that of other domes. Such differences might result from different styles of late-stage volcanism for some of the domes, or possibly from differences in how the erupted materials were altered over time (e.g. by subsequent volcanism or nearby cratering events). For example, many of the domes in the Marius Hills region have high circular polarization ratios (CPRs) in S-band (12.6 cm wavelength) and/or P-band (70 cm wavelength) radar data [2]. The high CPRs are indicative of rough surfaces, and suggest that these domes may have been built from overlapping blocky flows that in some cases have been covered by meters of regolith [2, 3]. In other cases, domes have low circular polarization ratios indicative of smooth, rock-poor surfaces or possibly pyroclastics. The 12 km diameter dome Manilius 1 in Mare Vaporum [1], has a CPR value of 0.20, which is significantly below values for the surrounding basalts [4]. To better understand the range of surface properties and styles of volcanism associated with the lunar domes, we are currently surveying lunar dome fields including the Marius Hills, Cauchy/Jansen dome field, the Gruithuisen domes, and domes near Hortensius and Vitruvius.

Analysis of GPS-measured deformation associated with the 2004-2006 dome-building eruption of Mount St. Helens, Washington: Chapter 15 in A volcano rekindled: the renewed eruption of Mount St. Helens, 2004-2006

USGS Publications Warehouse

Lisowski, Michael; Dzurisin, Daniel; Denlinger, Roger P.; Iwatsubo, Eugene Y.; Sherrod, David R.; Scott, William E.; Stauffer, Peter H.

2008-01-01

. The discrepancy between the estimated cavity-volume loss and the >83×106-m3 volume of the erupted dome can be explained, for the most part, by exsolution of gas in the stored magma and by minor input of new magma during the eruption.

Aneurysm permeability following coil embolization: packing density and coil distribution

PubMed Central

Chueh, Ju-Yu; Vedantham, Srinivasan; Wakhloo, Ajay K; Carniato, Sarena L; Puri, Ajit S; Bzura, Conrad; Coffin, Spencer; Bogdanov, Alexei A; Gounis, Matthew J

2015-01-01

Background Rates of durable aneurysm occlusion following coil embolization vary widely, and a better understanding of coil mass mechanics is desired. The goal of this study is to evaluate the impact of packing density and coil uniformity on aneurysm permeability. Methods Aneurysm models were coiled using either Guglielmi detachable coils or Target coils. The permeability was assessed by taking the ratio of microspheres passing through the coil mass to those in the working fluid. Aneurysms containing coil masses were sectioned for image analysis to determine surface area fraction and coil uniformity. Results All aneurysms were coiled to a packing density of at least 27%. Packing density, surface area fraction of the dome and neck, and uniformity of the dome were significantly correlated (p<0.05). Hence, multivariate principal components-based partial least squares regression models were used to predict permeability. Similar loading vectors were obtained for packing and uniformity measures. Coil mass permeability was modeled better with the inclusion of packing and uniformity measures of the dome (r2=0.73) than with packing density alone (r2=0.45). The analysis indicates the importance of including a uniformity measure for coil distribution in the dome along with packing measures. Conclusions A densely packed aneurysm with a high degree of coil mass uniformity will reduce permeability. PMID:25031179

The Laschamp geomagnetic excursion featured in nitrate record from EPICA-Dome C ice core

PubMed Central

Traversi, R.; Becagli, S.; Poluianov, S.; Severi, M.; Solanki, S. K.; Usoskin, I. G.; Udisti, R.

2016-01-01

Here we present the first direct comparison of cosmogenic 10Be and chemical species in the period of 38–45.5 kyr BP spanning the Laschamp geomagnetic excursion from the EPICA-Dome C ice core. A principal component analysis (PCA) allowed to group different components as a function of the main sources, transport and deposition processes affecting the atmospheric aerosol at Dome C. Moreover, a wavelet analysis highlighted the high coherence and in-phase relationship between 10Be and nitrate at this time. The evident preferential association of 10Be with nitrate rather than with other chemical species was ascribed to the presence of a distinct source, here labelled as “cosmogenic”. Both the PCA and wavelet analyses ruled out a significant role of calcium in driving the 10Be and nitrate relationship, which is particularly relevant for a plateau site such as Dome C, especially in the glacial period during which the Laschamp excursion took place. The evidence that the nitrate record from the EDC ice core is able to capture the Laschamp event hints toward the possibility of using this marker for studying galactic cosmic ray flux variations and thus also major geomagnetic field excursions at pluri-centennial-millennial time scales, thus opening up new perspectives in paleoclimatic studies. PMID:26819064

[Some morphometric parameters of nucleoli and nuclei in invasive ductal breast carcinomas in women].

PubMed

Karpinska-Kaczmarczyk, Katarzyna

2009-01-01

The purpose of this study was to correlate seven morphometric parameters of nucleoli and nuclei of invasive ductal cancer cells with some clinico-pathological factors such as age, tumor size, axillary lymph node status, MIB-1 proliferation index, and estrogen receptor expression in tumor cells. Methyl green-pyronin Y (MG-PY) was used for simultaneous staining of nuclei and nucleoli in histological sections of 150 invasive ductal breast carcinomas. Next, morphometric parameters of nucleoli and nuclei of tumor cells were measured with computerized image analysis. Nuclear area and number of nucleoli in breast tumor cells were greater in younger axillary node-negative patients. The number of nucleoli and nucleolar shape polymorphism were reduced in tumors measuring 20 mm or less or with lower histological grade. Nuclear area, nucleolar number, and nucleolar polymorphism in carcinomas with low proliferation index and estrogen receptor expression were smaller than in carcinomas with high proliferation index and no estrogen receptor expression. Nucleolar area in primary tumors without axillary node involvement was greater than in tumors with more than three axillary nodes positive. MG-PY selectively and simultaneously stains nucleoli and nuclei of tumor cells enabling standardized and reproducible examination of these structures with computerized image analysis. Univariate statistical analysis disclosed that some morphometric parameters of nucleoli and nuclei of tumor cells correlated with several established clinico-pathological prognostic factors. Therefore, the prognostic significance of these parameters should be studied in a larger group of patients with invasive ductal breast carcinomas.

Comprehensive morphometric analysis of mononuclear cell infiltration during experimental renal allograft rejection.

PubMed

Hoffmann, Ute; Bergler, Tobias; Jung, Bettina; Steege, Andreas; Pace, Claudia; Rümmele, Petra; Reinhold, Stephan; Krüger, Bernd; Krämer, Bernhard K; Banas, Bernhard

2013-01-01

The role of specific subtypes of infiltrating cells in acute kidney allograft rejection is still not clear and was so far not examined by different analyzing methods under standardized conditions of an experimental kidney transplantation model. Immunohistochemical staining of CD3, CD20 and CD68 was performed in rat allografts, in syngeneically transplanted rats and in control rats with a test duration of 6 and 28 days. The detailed expression and localization of infiltrating cells were analyzed manually in different kidney compartments under light microscope and by the two different morphometric software programs. Data were correlated with the corresponding kidney function as well as with histopathological classification. The information provided by the morphometric software programs on the infiltration of the specific cell types after renal transplantation was in accordance with the manual analysis. Morphometric methods were solid to analyze reliably the induction of cellular infiltrates after renal transplantation. By manual analysis we could clearly demonstrate the detailed localization of the specific cell infiltrates in the different kidney compartments. Besides infiltration of CD3 and CD68 infiltrating cells, a robust infiltration of CD20 B-cells in allogeneically transplanted rats, even at early time points after transplantation was detected. Additionally an MHC class I expression could reliable be seen in allogeneically transplanted rats. The infiltration of B-cells and the reliable antigen presentation might act as a silent subclinical trigger for subsequent chronic rejection and premature graft loss. Copyright © 2012 Elsevier B.V. All rights reserved.

Effects of environmental enrichment on blood vessels in the optic tract of malnourished rats: A morphological and morphometric analysis.

PubMed

Barbosa, Everton Horiquini; Soares, Roberto Oliveira; Braga, Natália Nassif; Almeida, Sebastião de Sousa; Lachat, João-José

2016-06-01

This study aimed to compare the effects of environmental enrichment in nourished (on a diet containing 16% protein) and malnourished (on a diet containing 6% protein) rats during the critical period of brain development, specifically focusing on the optic nerve. By means of morphologic and morphometric assessment of the optic nerve, we analyzed the changes caused by diet and stimulation (environmental enrichment) on postnatal day 35, a time point ideal for such morphological analysis since developmental processes are considered complete at this age. Malnourished animals presented low body and brain weights and high body-to-brain weight ratio compared to well-nourished rats. Furthermore, malnourished animals showed morphological changes in the optic nerve such as edema and vacuolization characterized by increased interstitial space. The malnourished-stimulated group presented lesions characteristic of early protein malnutrition but were milder than lesions exhibited by malnourished-non-stimulated group. The morphometric analysis revealed no difference in glial cell density between groups, but there was significantly higher blood vessel density in the stimulated rats, independent of their nutritional condition. Our data indicate that protein malnutrition imposed during the critical period of brain development alters the cytoarchitecture of the optic nerve. In addition, we affirm that a 1-hour exposure to an enriched environment everyday was sufficient for tissue preservation in rats maintained on a low-protein diet. This protective effect might be related to angiogenesis, as confirmed by the increased vascular density observed in morphometric analyses.

Population structure of the Korean gizzard shad, Konosirus punctatus (Clupeiformes, Clupeidae) using multivariate morphometric analysis

NASA Astrophysics Data System (ADS)

Myoung, Se Hun; Kim, Jin-Koo

2016-03-01

The gizzard shad, Konosirus punctatus, is one of the most important fish species in Korea, China, Japan and Taiwan, and therefore the implementation of an appropriate population structure analysis is both necessary and fitting. In order to clarify the current distribution range for the two lineages of the Korean gizzard shad (Myoung and Kim 2014), we conducted a multivariate morphometric analysis by locality and lineage. We analyzed 17 morphometric and 5 meristic characters of 173 individuals, which were sampled from eight localities in the East Sea, the Yellow Sea and the Korean Strait. Unlike population genetics studies, the canonical discriminant analysis (CDA) results showed that the two morphotypes were clearly segregated by the center value "0" of CAN1, of which morphotype A occurred from the Yellow Sea to the western Korean Strait with negative values, and morphotype B occurred from the East Sea to the eastern Korean Strait with positive values even though there exists an admixture zone in the eastern Korean Strait. Further studies using more sensitive markers such as microsatellite DNA are required in order to define the true relationship between the two lineages.

Variability of morphometric parameters of human trabecular tissue from coxo-arthritis and osteoporotic samples.

PubMed

Marinozzi, Franco; Marinozzi, Andrea; Bini, Fabiano; Zuppante, Francesca; Pecci, Raffaella; Bedini, Rossella

2012-01-01

Morphometric and architectural bone parameters change in diseases such as osteoarthritis and osteoporosis. The mechanical strength of bone is primarily influenced by bone quantity and quality. Bone quality is defined by parameters such as trabecular thickness, trabecular separation, trabecular density and degree of anisotropy that describe the micro-architectural structure of bone. Recently, many studies have validated microtomography as a valuable investigative technique to assess bone morphometry, thanks to micro-CT non-destructive, non-invasive and reliability features, in comparison to traditional techniques such as histology. The aim of this study is the analysis by micro-computed tomography of six specimens, extracted from patients affected by osteoarthritis and osteoporosis, in order to observe the tridimensional structure and calculate several morphometric parameters.

Structural Analysis of Silicic Lavas Reveals the Importance of Endogenous Flow During Emplacement

NASA Astrophysics Data System (ADS)

Andrews, G. D.; Martens, A.; Isom, S.; Maxwell, A.; Brown, S. R.

2017-12-01

Recent observations of silicic lava flows in Chile strongly suggest sustained, endogeneous flow beneath an insulating carapace, where the flow advances through breakouts at the flow margin. New mapping of vertical exposures around the margin of Obsidian Dome, California, has identified discreet lobe structures in cross-section, suggesting that flow-front breakouts occured there during emplacement. The flow lobes are identified through structural measurements of flow-banding orientation and the stretching directions of vesicles. Newly acquired lidar of the Inyo Domes, including Obsidian Dome, is being analyzed to better understand the patterns of folding on the upper surface of the lavas, and to test for fold vergence patterns that may distinguish between endogenous and exogenous flow.

Determinants of the epithelial-muscular axis on embryonic stem cell-derived gut-like structures.

PubMed

Luo, Yi; Takaki, Miyako; Misawa, Hiromi; Matsuyoshi, Hiroko; Sasahira, Tomonori; Chihara, Yoshitomo; Fujii, Kiyomu; Ohmori, Hitoshi; Kuniyasu, Hiroki

2010-01-01

Dome-like structures with epithelial-muscular layers resembling the gut have been derived from mouse embryonic stem (ES) cells. These domes have been reported to show spontaneous contractions and are called ES gut. In the present study, we examined the epithelial-muscular axis of these domes by detecting differentiation markers. A normal epithelial-muscular axis was exhibited in the domes with spontaneous motility, whereas the domes without spontaneous motility showed either an inverted or obscure axis. To investigate the factors affecting the epithelial-muscular axis, we examined the expression of hedgehog signaling factors in the domes. Expression of hedgehog family factors was detected in the epithelial components of the domes with motility, whereas this expression was inverted or obscure in the domes without motility. Out of the 25 domes, 10 of the 10 motility (+) domes showed a normal epithelial-muscular axis, whereas 14 of the 15 motility (-) domes lacked a normal epithelial-muscular axis. This implies that activin A upregulated the expression of sonic hedgehog and intestinal alkaline phosphatase in the embryoid bodies. These findings suggest that the motility of the ES gut depends on the domes' epithelial-muscular axis. Copyright © 2010 S. Karger AG, Basel.

An application of LOTEM around salt dome near Houston, Texas

NASA Astrophysics Data System (ADS)

Paembonan, Andri Yadi; Arjwech, Rungroj; Davydycheva, Sofia; Smirnov, Maxim; Strack, Kurt M.

2017-07-01

A salt dome is an important large geologic structure for hydrocarbon exploration. It may seal a porous reservoir of rocks that form petroleum reservoirs. Several techniques such as seismic, gravity, and electromagnetic including magnetotelluric have successfully yielded salt dome interpretation. Seismic has difficulties seeing through the salt because the seismic energy gets trapped by the salt due to its high velocity. Gravity and electromagnetics are more ideal methods. Long Offset Transient Electromagnetic (LOTEM) and Focused Source Electromagnetic (FSEM) were tested over a salt dome near Houston, Texas. LOTEM data were recorded at several stations with varying offset, and the FSEM tests were also made at some receiver locations near a suspected salt overhang. The data were processed using KMS's processing software: First, for assurance, including calibration and header checking; then transmitter and receiver data are merged and microseismic data is separated; Finally, data analysis and processing follows. LOTEM processing leads to inversion or in the FSEM case 3D modeling. Various 3D models verify the sensitivity under the salt dome. In addition, the processing was conducted pre-stack, stack, and post-stack. After pre-stacking, the noise was reduced, but showed the ringing effect due to a low-pass filter. Stacking and post-stacking with applying recursive average could reduce the Gibbs effect and produce smooth data.

Analysis of light extraction efficiency enhancement for thin-film-flip-chip InGaN quantum wells light-emitting diodes with GaN micro-domes.

PubMed

Zhao, Peng; Zhao, Hongping

2012-09-10

The enhancement of light extraction efficiency for thin-film flip-chip (TFFC) InGaN quantum wells (QWs) light-emitting diodes (LEDs) with GaN micro-domes on n-GaN layer was studied. The light extraction efficiency of TFFC InGaN QWs LEDs with GaN micro-domes were calculated and compared to that of the conventional TFFC InGaN QWs LEDs with flat surface. The three dimensional finite difference time domain (3D-FDTD) method was used to calculate the light extraction efficiency for the InGaN QWs LEDs emitting at 460nm and 550 nm, respectively. The effects of the GaN micro-dome feature size and the p-GaN layer thickness on the light extraction efficiency were studied systematically. Studies indicate that the p-GaN layer thickness is critical for optimizing the TFFC LED light extraction efficiency. Significant enhancement of the light extraction efficiency (2.5-2.7 times for λ(peak) = 460nm and 2.7-2.8 times for λ(peak) = 550nm) is achievable from TFFC InGaN QWs LEDs with optimized GaN micro-dome diameter and height.

Delimitation of volcanic edifices for landscape characterization and planning

NASA Astrophysics Data System (ADS)

Melis, Maria Teresa; Mundula, Filippo; Dessì, Francesco; Danila Patta, Elisabetta; Funedda, Antonio; Cioni, Raffaello

2014-05-01

The European Landscape Convention, recently adopted in Italy, indicates specific landforms to be selected as special protected sites. Active and inactive volcanic edifices, defined as the products of evolution of aggradational (lava effusion, pyroclastic deposition, magma intrusion) and degradational processes (erosion, deformation, gravitative phenomena), are one of the specific landforms to be protected. In order to protect these sites, management and planning measures are to be defined and shared with the local communities. In the framework of the Regional Landscape Management Plan of Sardinia (Italy), a detailed study aimed at identifying and delimiting Cenozoic volcanic edifices was performed. The large geological and morphological variability of the volcanic edifices of Sardinia in terms of type, dimension, age, integrity (a measure of the wholeness and intactnes of the volcanic edifice), geology and paleomorphology of the substrate, does not allow the definition of an automatic procedure for extracting the boundaries to delimit the volcanic edifices. In addition, quantitative geomorphological studies in the field of volcanology are confined to specific volcano types, and landscape literature does not suggest any universal criteria for delimiting volcanic edifices, except for the use of the concave breaks in slope at their base (Euillades et al., Computers and Geosciences, 2013). As this simple criterion can be unequivocally applied only in the ideal case of symmetric cones or domes built up on a planar surface, we developed a multidisciplinary methodology based on the integrated analysis of geological, geomorphological and morphometrical data of each edifice. The process of selection and delimitation of the volcanic edifices is the result of the following steps: i) a literature based delimitation of the volcanic edifice; ii) a preliminary delimitation through photo-interpretation and the use of geological criteria; and iii) a final refinement based on the use of DEM-based quantitative elaborations. This final step consists in the construction of maps of the angle of slope and of the surface curvature (concavity, convexity) generated by digital topographic maps in 1:10.000. In addition to this, morphological parameters were combined following the method proposed by Grosse et al. (Geomorphology, 2012) and a new algorithm based on a different combination of the morphometric parameters. The edifice boundaries are manually defined by cross-checking all the available data, and the results are discussed through the use of some examples.

Deposits from the 12 July Dome Collapse and Explosive Activity at Soufriere Hills Volcano, 12-15 July 2003

NASA Astrophysics Data System (ADS)

Edmonds, M.; Herd, R.; Strutt, M.; Mann, C.

2003-12-01

A large dome collapse took place on 12-13 July 2003 at Soufriere Hills Volcano. This event was the largest in magnitude during the 1995-2003 eruption and involved over 120 million m3 andesite dome and talus material. The collapse took place over 18 hours and culminated in an explosive phase that continued intermittently until 15 July 2003. Prior to the collapse, the total volume of the dome was 230 million m3 and was made up of remnants of lava erupted 1997-2001, talus material and fresh andesite dome lava erupted during the last two years. Talus made up around 50% of the total dome volume. This paper describes and interprets the pyroclastic flow and airfall deposits from this event, using other monitoring data and empirical evidence to reconstruct the dome collapse. The airfall and pyroclastic flow deposits were studied in detail over the weeks following the collapse. Airfall deposits were studied at 45 locations around the island and 75 samples were collected for analysis. The surge deposit stretched over 10 km2 on land and 35 pits were dug at intervals through it. The sections were described and sampled, yielding a further 60 samples for grain size analysis. Further sampling was carried out on the block and ash deposits in the Tar River Valley and on the Tar River Fan. Pumices from the post-collapse explosion sequence were collected and their densities measured and mass coverage estimated. Deposit maps for airfall, lithics and pumices were constructed for all of the individual events and a map to show the distribution of the main surge unit was generated. The collapse was monitored in real-time using the MVO seismic network and observations from the field. The sequence of events was as follows. From 09:00 to 18:00, low-energy pyroclastic flows took place, confined to the Tar River Valley, which reached the sea at the mouth of Tar River. These flows gradually increased in energy throughout the day but were not associated with energetic, large surges. By 18:00 the pyroclastic flows had increased in volume and were causing phreatic explosions as large, hot blocks hit the sea on the Tar River Fan. By 20:00 the pyroclastic flows had changed in character and were associated with a larger seismic signal and powerful surges that traveled up to 3 km off the coast over the surface of the sea. The most energetic phase of the eruption took place between 22:30 12 July and 01:30 13 July. The dome collapse of 12-13 July culminated in several very large individual pyroclastic flows, representing the collapse of the massive, hot, gas-rich interior of the lava dome. One very large flow was associated with a destructive and energetic surge that swept over topography to the north of the Tar River, killed 40-50 cows, removed trees at their bases and caused large clasts to become embedded in trees at a height of 1.5 m above the ground surface north of Irish Ghaut. The unloading of such large masses of lava dome from over the vent area caused large and powerful explosions. The mapping of the deposits from this event has shed light on the origins of the surge and the timing of large phreatic and magmatic explosions and has led to a new understanding of the hazard potential of large surges derived from the Tar River Valley during large dome collapses at Soufriere Hills Volcano.

Drainage morphometric analysis for assessing form and processes of the watersheds of Pachamalai hills and its adjoinings, Central Tamil Nadu, India

NASA Astrophysics Data System (ADS)

Prabhakaran, A.; Jawahar Raj, N.

2018-03-01

The present study attempts to understand the form and geomorphic/hydrologic processes of the 20 watersheds of the Pachamalai hills and its adjoinings located in Tamil Nadu State of southern India from the analysis of its drainage morphometric characteristics. Survey of India's topographic sheets of 1:50,000 is the data source from which stream networks and watersheds of the study area were demarcated followed by the analysis of their morphometric characteristics using ArcGIS software. The results of the analysis formed the basis for deducing the form and processes of the watersheds of the study area. The form of the watersheds inferred from the analysis includes shape, length, slope steepness and length, degree of branching of streams, dissection and elongation of watersheds. The geomorphic/hydrologic processes inferred include denudation rate, potential energy, intensity of erosion, mean annual run off, mean discharge, discharge rate, rock resistivity and infiltration potential, amount of sediment transported, mean annual rainfall, rainfall intensity, lagtime, flash flood potential, flood discharge per unit area, sediment yield and speed of the water flow in the streams. The understanding of variations of form and processes mentioned can be used towards prioritizing the watersheds for development, management and conservation planning.

Morphometric Analysis to Prioritize Sub-Watershed for Flood Risk Assessment in Central Karakoram National Park Using Gis/rs Approach

NASA Astrophysics Data System (ADS)

Syed, N. H.; Rehman, A. A.; Hussain, D.; Ishaq, S.; Khan, A. A.

2017-11-01

Morphometric analysis is vital for any watershed investigation and it is inevitable for flood risk assessment in sub-watershed basins. Present study undertaken to carry out critical evaluation and assessment of sub watershed morphological parameters for flood risk assessment of Central Karakorum National Park (CKNP), where Geographical information system and remote sensing (GIS & RS) approach used for quantifying the parameter and mapping of sub watershed units. ASTER DEM used as a geo-spatial data for watershed delineation and stream network. Morphometric analysis carried out using spatial analyst tool of ArcGIS 10.2. The parameters included were bifurcation ratio (Rb), Drainage Texture (Rt), Circulatory ratio (Rc), Elongated ratio (Re), Drainage density (Dd), Stream Length (Lu), Stream order (Su), Slope and Basin length (Lb) have calculated separately. The analysis revealed that the stream order varies from order 1 to 6 and the total numbers of stream segments of all orders were 52. Multi criteria analysis process used to calculate the risk factor. As an accomplished result, map of sub watershed prioritization developed using weighted standardized risk factor. These results helped to understand sensitivity of flush floods in different sub watersheds of the study area and leaded to better management of the mountainous regions in prospect of flush floods.

a Morphometric Analysis of HYLARANA SIGNATA Group (previously Known as RANA SIGNATA and RANA PICTURATA) of Malaysia

NASA Astrophysics Data System (ADS)

Zainudin, Ramlah; Sazali, Siti Nurlydia

A study on morphometrical variations of Malaysian Hylarana signata group was conducted to reveal the morphological relationships within the species group. Twenty-seven morphological characters from 18 individuals of H. signata and H. picturata were measured and recorded. The numerical data were analysed using Discriminant Function Analysis in SPSS program version 16.0 and UPGMA Cluster Analysis in Minitab program version 14.0. The results show the complexity clustering between the examined species that might be due to ancient polymorphism of the lineages or cryptic species within the group. Hence, further study should include more representatives in order to fully elucidate the morphological relationships of H. signata group.

A web-system of virtual morphometric globes

NASA Astrophysics Data System (ADS)

Florinsky, Igor; Garov, Andrei; Karachevtseva, Irina

2017-04-01

Virtual globes — programs implementing interactive three-dimensional (3D) models of planets — are increasingly used in geo- and planetary sciences. We develop a web-system of virtual morphometric globes. As the initial data, we used the following global digital elevation models (DEMs): (1) a DEM of the Earth extracted from SRTM30_PLUS database; (2) a DEM of Mars extracted from the Mars Orbiter Laser Altimeter (MOLA) gridded data record archive; and (3) A DEM of the Moon extracted from the Lunar Orbiter Laser Altimeter (LOLA) gridded data record archive. From these DEMs, we derived global digital models of the following 16 local, nonlocal, and combined morphometric variables: horizontal curvature, vertical curvature, mean curvature, Gaussian curvature, minimal curvature, maximal curvature, unsphericity curvature, difference curvature, vertical excess curvature, horizontal excess curvature, ring curvature, accumulation curvature, catchment area, dispersive area, topographic index, and stream power index (definitions, formulae, and interpretations can be found elsewhere [1]). To calculate local morphometric variables, we applied a finite-difference method intended for spheroidal equal angular grids [1]. Digital models of a nonlocal and combined morphometric variables were derived by a method of Martz and de Jong adapted to spheroidal equal angular grids [1]. DEM processing was performed in the software LandLord [1]. The calculated morphometric models were integrated into the testing version of the system. The following main functions are implemented in the system: (1) selection of a celestial body; (2) selection of a morphometric variable; (3) 2D visualization of a calculated global morphometric model (a map in equirectangular projection); (4) 3D visualization of a calculated global morphometric model on the sphere surface (a globe by itself); (5) change of a globe scale (zooming); and (6) globe rotation by an arbitrary angle. The testing version of the system represents morphometric models with the resolution of 15'. In the final version of the system, we plan to implement a multiscale 3D visualization for models of 17 morphometric variables with the resolution from 15' to 30". The web-system of virtual morphometric globes is designed as a separate unit of a 3D web GIS for storage, processing, and access to planetary data [2], which is currently developed as an extension of an existing 2D web GIS (http://cartsrv.mexlab.ru/geoportal). Free, real-time web access to the system of virtual globes will be provided. The testing version of the system is available at: http://cartsrv.mexlab.ru/virtualglobe. The study is supported by the Russian Foundation for Basic Research, grant 15-07-02484. References 1. Florinsky, I.V., 2016. Digital Terrain Analysis in Soil Science and Geology. 2nd ed. Academic Press, Amsterdam, 486 p. 2. Garov, A.S., Karachevtseva, I.P., Matveev, E.V., Zubarev, A.E., and Florinsky, I.V., 2016. Development of a heterogenic distributed environment for spatial data processing using cloud technologies. International Archives of the Photogrammetry, Remote Sensing and Spatial Information Sciences, 41(B4): 385-390.

Nonlinear vibration of a hemispherical dome under external water pressure

NASA Astrophysics Data System (ADS)

Ross, C. T. F.; McLennan, A.; Little, A. P. F.

2011-07-01

The aim of this study was to analyse the behaviour of a hemi-spherical dome when vibrated under external water pressure, using the commercial computer package ANSYS 11.0. In order to achieve this aim, the dome was modelled and vibrated in air and then in water, before finally being vibrated under external water pressure. The results collected during each of the analyses were compared to the previous studies, and this demonstrated that ANSYS was a suitable program and produced accurate results for this type of analysis, together with excellent graphical displays. The analysis under external water pressure, clearly demonstrated that as external water pressure was increased, the resonant frequencies decreased and a type of dynamic buckling became likely; because the static buckling eigenmode was similar to the vibration eigenmode. ANSYS compared favourably with the in-house software, but had the advantage that it produced graphical displays. This also led to the identification of previously undetected meridional modes of vibration; which were not detected with the in-house software.

Structural analysis of three extensional detachment faults with data from the 2000 Space-Shuttle Radar Topography Mission

USGS Publications Warehouse

Spencer, J.E.

2010-01-01

The Space-Shuttle Radar Topography Mission provided geologists with a detailed digital elevation model of most of Earth's land surface. This new database is used here for structural analysis of grooved surfaces interpreted to be the exhumed footwalls of three active or recently active extensional detachment faults. Exhumed fault footwalls, each with an areal extent of one hundred to several hundred square kilometers, make up much of Dayman dome in eastern Papua New Guinea, the western Gurla Mandhata massif in the central Himalaya, and the northern Tokorondo Mountains in central Sulawesi, Indonesia. Footwall curvature in profile varies from planar to slightly convex upward at Gurla Mandhata to strongly convex upward at northwestern Dayman dome. Fault curvature decreases away from the trace of the bounding detachment fault in western Dayman dome and in the Tokorondo massif, suggesting footwall flattening (reduction in curvature) following exhumation. Grooves of highly variable wavelength and amplitude reveal extension direction, although structural processes of groove genesis may be diverse.

The Development of M Cells in Peyer’s Patches Is Restricted to Specialized Dome-Associated Crypts

PubMed Central

Gebert, Andreas; Fassbender, Susanne; Werner, Kerstin; Weissferdt, Annikka

1999-01-01

It is controversial whether the membranous (M) cells of the Peyer’s patches represent a separate cell line or develop from enterocytes under the influence of lymphocytes on the domes. To answer this question, the crypts that produce the dome epithelial cells were studied and the distribution of M cells over the domes was determined in mice. The Ulex europaeus agglutinin was used to detect M cells in mouse Peyer’s patches. Confocal microscopy with lectin-gold labeling on ultrathin sections, scanning electron microscopy, and laminin immuno-histochemistry were combined to characterize the cellular composition and the structure of the dome-associated crypts and the dome epithelium. In addition, the sites of lymphocyte invasion into the dome epithelium were studied after removal of the epithelium using scanning electron microscopy. The domes of Peyer’s patches were supplied with epithelial cells that derived from two types of crypt: specialized dome-associated crypts and ordinary crypts differing not only in shape, size, and cellular composition but also in the presence of M cell precursors. When epithelial cells derived from ordinary crypts entered the domes, they formed converging radial strips devoid of M cells. In contrast to the M cells, the sites where lymphocytes invaded the dome epithelium were not arranged in radial strips, but randomly distributed over the domes. M cell development is restricted to specialized dome-associated crypts. Only dome epithelial cells that derive from these specialized crypts differentiate into M cells. It is concluded that M cells represent a separate cell line that is induced in the dome-associated crypts by still unknown, probably diffusible lymphoid factors. PMID:10329609

Ejaculate fractioning effect on llama sperm head morphometry as assessed by the ISAS(®) CASA system.

PubMed

Soler, C; Sancho, M; García, A; Fuentes, Mc; Núñez, J; Cucho, H

2014-02-01

South American camelid sperm characteristics are poorly known compared with those of other domestic animals. The long-term duration of ejaculation makes difficult to gather all the seminal fluid, implying possible ejaculation portion losses. Thus, the aim of this research was to evaluate the characteristics of the morphology and morphometry of the spermatozoa change during ejaculation. The morphometric characterization was tested on nine specimens of the Lanuda breed, using a special artificial vagina. In five of the animals, a fractioning of the ejaculate was performed by taking samples every 5 min. for a total of 20 min. Air-dried seminal smears were stained with Hemacolor and mounted permanently with Eukitt. Morphometric analysis was carried out with the morphometry module of the ISAS(®) CASA system. Almost 350 cells were analysed per sample, with a total number of 3207 spermatozoa. Mean values were given as follows: length: 5.51 μm; width: 3.38 μm; area: 17.75 μm(2) ; perimeter: 14.8 μm; ellipticity: 0.24; elongation: 0.56; rugosity: 0.87; regularity: 1.07; and shape factor: 1.41. Different animals showed differences in their morphometric values. When we compared the values from different fractions, only two samples showed differences in morphometric parameter values and four samples showed differences in shape parameters. Multivariate analysis allowed the size classification of the cells into three classes and five classes of shapes. The distribution of classes among fractions showed no differences. Despite the individual morphometric differences observed in some fractions, the characteristics of the sperm head morphometry can be considered constant along the ejaculatory period in the llama. © 2013 Blackwell Verlag GmbH.

Revision of the Malagasy Camponotus edmondi species group (Hymenoptera, Formicidae, Formicinae): integrating qualitative morphology and multivariate morphometric analysis.

PubMed

Rakotonirina, Jean Claude; Csősz, Sándor; Fisher, Brian L

2016-01-01

The Malagasy Camponotus edmondi species group is revised based on both qualitative morphological traits and multivariate analysis of continuous morphometric data. To minimize the effect of the scaling properties of diverse traits due to worker caste polymorphism, and to achieve the desired near-linearity of data, morphometric analyses were done only on minor workers. The majority of traits exhibit broken scaling on head size, dividing Camponotus workers into two discrete subcastes, minors and majors. This broken scaling prevents the application of algorithms that uses linear combination of data to the entire dataset, hence only minor workers were analyzed statistically. The elimination of major workers resulted in linearity and the data meet required assumptions. However, morphometric ratios for the subsets of minor and major workers were used in species descriptions and redefinitions. Prior species hypotheses and the goodness of clusters were tested on raw data by confirmatory linear discriminant analysis. Due to the small sample size available for some species, a factor known to reduce statistical reliability, hypotheses generated by exploratory analyses were tested with extreme care and species delimitations were inferred via the combined evidence of both qualitative (morphology and biology) and quantitative data. Altogether, fifteen species are recognized, of which 11 are new to science: Camponotus alamaina sp. n. , Camponotus androy sp. n. , Camponotus bevohitra sp. n. , Camponotus galoko sp. n. , Camponotus matsilo sp. n. , Camponotus mifaka sp. n. , Camponotus orombe sp. n. , Camponotus tafo sp. n. , Camponotus tratra sp. n. , Camponotus varatra sp. n. , and Camponotus zavo sp. n. Four species are redescribed: Camponotus echinoploides Forel, Camponotus edmondi André, Camponotus ethicus Forel, and Camponotus robustus Roger. Camponotus edmondi ernesti Forel, syn. n. is synonymized under Camponotus edmondi . This revision also includes an identification key to species for both minor and major castes, information on geographic distribution and biology, taxonomic discussions, and descriptions of intraspecific variation. Traditional taxonomy and multivariate morphometric analysis are independent sources of information which, in combination, allow more precise species delimitation. Moreover, quantitative characters included in identification keys improve accuracy of determination in difficult cases.

Revision of the Malagasy Camponotus edmondi species group (Hymenoptera, Formicidae, Formicinae): integrating qualitative morphology and multivariate morphometric analysis

PubMed Central

Rakotonirina, Jean Claude; Csősz, Sándor; Fisher, Brian L.

2016-01-01

Abstract The Malagasy Camponotus edmondi species group is revised based on both qualitative morphological traits and multivariate analysis of continuous morphometric data. To minimize the effect of the scaling properties of diverse traits due to worker caste polymorphism, and to achieve the desired near-linearity of data, morphometric analyses were done only on minor workers. The majority of traits exhibit broken scaling on head size, dividing Camponotus workers into two discrete subcastes, minors and majors. This broken scaling prevents the application of algorithms that uses linear combination of data to the entire dataset, hence only minor workers were analyzed statistically. The elimination of major workers resulted in linearity and the data meet required assumptions. However, morphometric ratios for the subsets of minor and major workers were used in species descriptions and redefinitions. Prior species hypotheses and the goodness of clusters were tested on raw data by confirmatory linear discriminant analysis. Due to the small sample size available for some species, a factor known to reduce statistical reliability, hypotheses generated by exploratory analyses were tested with extreme care and species delimitations were inferred via the combined evidence of both qualitative (morphology and biology) and quantitative data. Altogether, fifteen species are recognized, of which 11 are new to science: Camponotus alamaina sp. n., Camponotus androy sp. n., Camponotus bevohitra sp. n., Camponotus galoko sp. n., Camponotus matsilo sp. n., Camponotus mifaka sp. n., Camponotus orombe sp. n., Camponotus tafo sp. n., Camponotus tratra sp. n., Camponotus varatra sp. n., and Camponotus zavo sp. n. Four species are redescribed: Camponotus echinoploides Forel, Camponotus edmondi André, Camponotus ethicus Forel, and Camponotus robustus Roger. Camponotus edmondi ernesti Forel, syn. n. is synonymized under Camponotus edmondi. This revision also includes an identification key to species for both minor and major castes, information on geographic distribution and biology, taxonomic discussions, and descriptions of intraspecific variation. Traditional taxonomy and multivariate morphometric analysis are independent sources of information which, in combination, allow more precise species delimitation. Moreover, quantitative characters included in identification keys improve accuracy of determination in difficult cases. PMID:28050160

HANFORD DOUBLE SHELL TANK THERMAL AND SEISMIC PROJECT SEISMIC ANALYSIS IN SUPPORT OF INCREASED LIQUID LEVEL IN 241-AP TANK FARMS

DOE Office of Scientific and Technical Information (OSTI.GOV)

TC MACKEY; FG ABATT; MW RINKER

2009-01-14

The essential difference between Revision 1 and the original issue of this report is in the spring constants used to model the anchor bolt response for the anchor bolts that tie the steel dome of the primary tank to the concrete tank dome. Consequently, focus was placed on the changes in the anchor bolt responses, and a full reevaluation of all tank components was judged to be unnecessary. To confirm this judgement, primary tank stresses from the revised analysis of the BES-BEC case are compared to the original analysis and it was verified that the changes are small, as expected.

Geohydrology of the Keechi, Mount Sylvan, Oakwood, and Palestine salt domes in the northeast Texas salt-dome basin

DOE Office of Scientific and Technical Information (OSTI.GOV)

Carr, J.E.; Halasz, S.J.; Peters, H.B.

1980-01-01

The salt within these domes has penetrated as much as 20,000 feet of Mesozoic and Cenozoic strata, and presently extends to within 120 to 800 feet of the land surface. The salt penetrates or closely underlies major freshwater and salinewater aquifers within the basin. To provide a safe repository for radioactive wastes within one or more of these domes, a thorough understanding of the geohydrology needs to be obtained, and the hydrologic stability of the domes needs to be established for the expected life of the storage facility. Dissolution may exist at all four candidate salt domes, possibly through contactmore » with Cretaceous or Tertiary aquifers, or through fault systems in the vicinity of the domes. Strata overlying and surrounding Palestine and Keechi Salt Domes have been arched into steeply-dipping folds that are complexly faulted. Similar conditions exist at Oakwood and Mount Sylvan Domes, except that the Tertiary strata have been only moderately disturbed. Additional problems concerning the hydrologic stability of Oakwood and Palestine Salt Domes have resulted from the disposal of oil-field salinewater in the cap rock at the Oakwood Dome and previous solution mining of salt at the Palestine Dome.« less

Explosive to Effusive Transition in Intermediate Volcanism: An Analysis of Changing Magma System Conditions in Dominica

NASA Astrophysics Data System (ADS)

Bersson, J.; Waters, L. E.; Frey, H. M.; Nicolaysen, K. P.; Manon, M. R. F.

2017-12-01

The oscillation between explosive and effusive intermediate (59-62 wt% SiO2) volcanism in the Roseau Valley on Dominica, an island in the Lesser Antilles Arc, provides an opportunity to investigate temporal changes in the magmatic system. Here, we test the relationship between the Roseau ignimbrites (1-65 ka) and the Micotrin dome ( 1.1 ka) which are proposed to originate from the same magmatic system, with a detailed petrologic analysis of phenocrysts to determine commonalities or changes in pre-eruptive conditions (i.e., intensive variables). The ignimbrites are saturated in five phenocrysts (plagioclase + orthopyroxene + clinopyroxene + ilmenite + magnetite ± amphibole ± quartz), and the lava dome contains the same assemblage, but with notable differences: amphiboles are entirely reacted, and quartz occurs in greater abundance. Plagioclase in the ignimbrites ranges in composition from An46-93, and those in the dome range from An46-85. Two Fe-Ti oxide geo-thermometry reveal pre-eruptive temperatures from 730-820°C for three different ignimbrite units, whereas the pre-eruptive temperature for the dome is slightly hotter (850±23°C). Values of fO2 (relative to NNO) derived from Fe-Ti oxide oxygen-barometry range from +0.3 to +1.32 ΔNNO for the ignimbrites, which overlap with those from the dome (+0.5 to +0.9 ΔNNO). Pre-eruptive temperatures, plagioclase compositions, whole rock and glass compositions are incorporated into a plagioclase-liquid hygrometer to determine pre-eruptive melt H2O contents for each sample. H2O contents for ignimbrites range from 7.1-9.3 wt%, and those from the lava dome range from 6.7-7.1 wt%. Application of a H2O solubility model shows that water contents for the Roseau magmas correspond to pressures of 3-5 kbar. The most notable difference between the explosive and effusive magmas is that the lava dome has a higher pre-eruptive temperature than the ignimbrites. However, the results collectively suggest that more recent volcanism in the Roseau Valley (<5 ka) has hotter pre-eruptive temperatures, regardless of eruptive style, and that these intermediate magmas originate from sources in the deep crust (>5 kb). Understanding the magmatic system beneath Micotrin is important, as the capital of Roseau (pop. 15,000), is at the foot of the valley, built on old pyroclastic deposits.

Histomorphometric analysis of collagen architecture of auricular keloids in an Asian population.

PubMed

Chong, Yosep; Park, Tae Hwan; Seo, Sang won; Chang, Choong Hyun

2015-03-01

Keloids are a pathologic condition of the reparative process, which present as excessive scar formation that involves various cells and cytokines. Many studies focusing on the histologic feature of keloids, however, have shown discordant results without consideration of architectural aspect of collagen structure. The purpose of this study was to demonstrate a schematic illustration of collagen architecture of keloids, specifically auricular keloids, and to analyze each part on the histomorphologic and morphometric basis. Thirty-nine surgically excised auricular keloids were retrieved from the file of Kangbuk Samsung Hospital. After exhaustive histomorphologic analysis, 3 distinctive structural parts, keloidal collagen, organizing collagen, and proliferating core collagen, were identified and mapped in every case. Cellularity of fibroblasts, blood vessel density, degree of inflammatory cell infiltration, and mast cells counts using Masson trichrome stain, Van Gieson stain, toluidine blue stain, and immunohistochemical stains for CD31 and smooth muscle actin were analyzed in each part of each case. Morphometric analysis on these parameters using ImageJ software was performed using 3 representative images of each part. Three parts were histomorphologically distinct by shape and array of collagen bundles, fibroblasts cellularity, blood vessel density, degree of inflammatory cells, and mast cell infiltration. Morphometric analysis revealed statistically significant difference between each part in fibroblasts cellularity, blood vessel density, degree of inflammatory cell infiltration, and mast cells count. All parameters were exceedingly high in whorling hypercellular fibrous nodules in proliferating core collagen showing simultaneous changes in other parts. Morphologically and morphometrically, 3 distinctive parts were identified in auricular keloids. Mast cell infiltrations, blood vessel density, and fibroblast cellularity are simultaneously increased or decreased according to these parts. Proliferating core collagen might serve as a proliferating center of keloids and might be a key portion for tumor growth and recurrence.

Merapi's lava dome splitting explosion on 18 November 2013 observed by lidar and digital image correlation analysis.

NASA Astrophysics Data System (ADS)

Darmawan, Herlan; Walter, Thomas; Nikkhoo, Mehdi; Richter, Nicole

2015-04-01

After the 2010 Merapi eruption, the lava dome in the summit of the volcano was firstly growing and then subject to gradual cooling and contraction. In November 2013, a major phreatomagmatic explosion occurred, which caused an eruption column rising over 2 km high and destroyed a number of monitoring instruments in the near field. Bombs were thrown out over 1 km distance. The eruption produced volcanic ash and very fine materials. Deformation data from tilt or EDM showed no wide inflation or deflation associated with this eruption. In addition, high resolution TerraSAR-X data analysis also showed no edifice-wide deformation (Walter et al., 2015). Here we further examine two datasets to determine the morphologic and structural effects of this eruption. First we exploit fixed installed monitoring cameras and use a digital image correlation method to investigate geometric changes before and after the eruption. Second we acquired a high resolution terrestrial Lidar data set after the explosion and compared this another lidar data set acquired before. The result shows details on the splitted dome, the volume of the eruption and thickness of the deposits, and suggests that a new block at the front of the dome is inherently unstable and might break off to form a block and ash flow in the near future. Reference: TR Walter, Subandriyo J, Kirbani S, Bathke H, Suryanto W, Aisyah N, Darmawan H, Jousset P, Lühr BG, Dahm T (2015) Volcano-tectonic control of Merapi's lava dome splitting: The November 2013 fracture observed from high resolution TerraSAR-X data. Tectonophysics 639, 12 January 2015, Pages 23-33. doi:10.1016/j.tecto.2014.11.007

Geological evaluation of Gulf Coast salt domes: overall assessment of the Gulf Interior Region

DOE Office of Scientific and Technical Information (OSTI.GOV)

None

1981-10-01

The three major phases in site characterization and selection are regional studies, area studies, and location studies. This report characterizes regional geologic aspects of the Gulf Coast salt dome basins. It includes general information from published sources on the regional geology; the tectonic, domal, and hydrologic stability; and a brief description the salt domes to be investigated. After a screening exercise, eight domes were chosen for further characterization: Keechi, Oakwood, and Palestine Domes in Texas; Vacherie and Rayburn's domes in North Louisiana; and Cypress Creek and Richton domes in Mississippi. A general description of each, maps of the location, propertymore » ownership, and surface geology, and a geologic cross section were presented for each dome.« less

Shapes of Venusian 'pancake' domes imply episodic emplacement and silicic composition

NASA Technical Reports Server (NTRS)

Fink, Jonathan H.; Bridges, Nathan T.; Grimm, Robert E.

1993-01-01

The main evidence available for constraining the composition of the large circular 'pancake' domes on Venus is their gross morphology. Laboratory simulations using polyethylene glycol show that the height to diameter (aspect) ratios of domes of a given total volume depend critically on whether their extrusion was continuous or episodic, with more episodes leading to greater cooling and taller domes. Thus without observations of their emplacement, the compositions of Venusian domes cannot be uniquely constrained by their morphology. However, by considering a population of 51 Venusian domes to represent a sampling of many stages during the growth of domes with comparable histories, and by plotting aspect ratio versus total volume, we find that the shapes of the domes are most consistent with episodic emplacement. On Earth this mode of dome growth is found almost exclusively in lavas of dacite to rhyolite composition, strengthening earlier inferences about the presence of evolved magmas on Venus.

What factors control superficial lava dome explosivity?

PubMed

Boudon, Georges; Balcone-Boissard, Hélène; Villemant, Benoît; Morgan, Daniel J

2015-09-30

Dome-forming eruption is a frequent eruptive style and a major hazard on numerous volcanoes worldwide. Lava domes are built by slow extrusion of degassed, viscous magma and may be destroyed by gravitational collapse or explosion. The triggering of lava dome explosions is poorly understood: here we propose a new model of superficial lava-dome explosivity based upon a textural and geochemical study (vesicularity, microcrystallinity, cristobalite distribution, residual water contents, crystal transit times) of clasts produced by key eruptions. Superficial explosion of a growing lava dome may be promoted through porosity reduction caused by both vesicle flattening due to gas escape and syn-eruptive cristobalite precipitation. Both processes generate an impermeable and rigid carapace allowing overpressurisation of the inner parts of the lava dome by the rapid input of vesiculated magma batches. The relative thickness of the cristobalite-rich carapace is an inverse function of the external lava dome surface area. Explosive activity is thus more likely to occur at the onset of lava dome extrusion, in agreement with observations, as the likelihood of superficial lava dome explosions depends inversely on lava dome volume. This new result is of interest for the whole volcanological community and for risk management.

What factors control superficial lava dome explosivity?

PubMed Central

Boudon, Georges; Balcone-Boissard, Hélène; Villemant, Benoît; Morgan, Daniel J.

2015-01-01

Dome-forming eruption is a frequent eruptive style and a major hazard on numerous volcanoes worldwide. Lava domes are built by slow extrusion of degassed, viscous magma and may be destroyed by gravitational collapse or explosion. The triggering of lava dome explosions is poorly understood: here we propose a new model of superficial lava-dome explosivity based upon a textural and geochemical study (vesicularity, microcrystallinity, cristobalite distribution, residual water contents, crystal transit times) of clasts produced by key eruptions. Superficial explosion of a growing lava dome may be promoted through porosity reduction caused by both vesicle flattening due to gas escape and syn-eruptive cristobalite precipitation. Both processes generate an impermeable and rigid carapace allowing overpressurisation of the inner parts of the lava dome by the rapid input of vesiculated magma batches. The relative thickness of the cristobalite-rich carapace is an inverse function of the external lava dome surface area. Explosive activity is thus more likely to occur at the onset of lava dome extrusion, in agreement with observations, as the likelihood of superficial lava dome explosions depends inversely on lava dome volume. This new result is of interest for the whole volcanological community and for risk management. PMID:26420069

Advances in the Study of the Middle Cranial Fossa through Cutting Edge Neuroimaging Techniques.

PubMed

Juanes Méndez, Juan A; Ruisoto, Pablo; Paniagua, Juan C; Prats, Alberto

2018-01-16

The objective of this paper is to present a morphometric study of the middle cranial fossa from the study of 87 patients using cutting edge multislice computed tomography scans (32 detectors) and Magnetic Resonance Imaging. The study presents a detailed anatomical-radiological and morphometric analysis of the middle cranial fossa as well as its neurovascular elements in normal conditions. The implications of this investigation in training and clinical contexts are discussed.

Soil load above Hanford waste storage tanks (2 volumes)

DOE Office of Scientific and Technical Information (OSTI.GOV)

Pianka, E.W.

1995-01-25

This document is a compilation of work performed as part of the Dome Load Control Project in 1994. Section 2 contains the calculations of the weight of the soil over the tank dome for each of the 75-feet-diameter waste-storage tanks located at the Hanford Site. The chosen soil specific weight and soil depth measured at the apex of the dome crown are the same as those used in the primary analysis that qualified the design. Section 3 provides reference dimensions for each of the tank farm sites. The reference dimensions spatially orient the tanks and provide an outer diameter formore » each tank. Section 4 summarizes the available soil surface elevation data. It also provides examples of the calculations performed to establish the present soil elevation estimates. The survey data and other data sources from which the elevation data has been obtained are printed separately in Volume 2 of this Supporting Document. Section 5 contains tables that provide an overall summary of the present status of dome loads. Tables summarizing the load state corresponding to the soil depth and soil specific weight for the original qualification analysis, the gravity load requalification for soil depth and soil specific weight greater than the expected actual values, and a best estimate condition of soil depth and specific weight are presented for the Double-Shell Tanks. For the Single-Shell Tanks, only the original qualification analysis is available; thus, the tabulated results are for this case only. Section 6 provides a brief overview of past analysis and testing results that given an indication of the load capacity of the waste storage tanks that corresponds to a condition approaching ultimate failure of the tank. 31 refs.« less

Morphometric analysis of the folliculostellate cells and luteinizing hormone gonadotropic cells of the anterior pituitary of the men during the aging process.

PubMed

Čukuranović Kokoris, Jovana; Jovanović, Ivan; Pantović, Vukica; Krstić, Miljan; Stanojković, Milica; Milošević, Verica; Ugrenović, Slađana; Stojanović, Vesna

2017-02-01

The aim of this research was to quantify the changes in the morphology and density of the anterior pituitary folliculostellate (FS) and luteinizing hormone (LH) cells. Material was tissue of the pituitary gland of the 14 male cadavers. Tissue slices were immunohistochemically stained with monoclonal anti-LH antibody and polyclonal anti-S100 antibody for the detection of LH and FS cells, respectively. Digital images of the stained slices were afterwards morphometrically analyzed by ImageJ. Results of the morphometric analysis showed significant increase of the FS cells volume density in cases older than 70 years. Volume density of the LH cells did not significantly change, whereas their area significantly increased with age. Nucleocytoplasmic ratio of the LH cells gradually decreased and became significant after the age of 70. Finally, volume density of the FS cell significantly correlated with LH cells area and nucleocytoplasmic ratio. From all above cited, we concluded that in men, density and size of the FS cells increase with age. Long-term hypertrophy of the LH cells results in their functional decline after the age of 70. Strong correlation between FS cells and LH cells morphometric parameters might point to age-related interaction between these two cell groups. Copyright © 2016 Elsevier Ltd. All rights reserved.

Linking Seismicity at Depth to the Mechanics of a Lava Dome Failure - a Forecasting Approach

NASA Astrophysics Data System (ADS)

Salvage, R. O.; Neuberg, J. W.; Murphy, W.

2014-12-01

Soufriere Hills volcano (SHV), Montserrat has been in a state of ongoing unrest since 1995. Prior to eruptions, an increase in the number of seismic events has been observed. We use the Material Failure Law (MFL) (Voight, 1988) to investigate how an accelerating number of low frequency seismic events are related to the timing of a large scale dome collapse in June 1997. We show that although the forecasted timing of a dome collapse may coincide with the known timing, the accuracy of the application of the MFL to the data is poor. Using a cross correlation technique we show how characterising seismicity into similar waveform "families'' allows us to focus on a single process at depth and improve the reliability of our forecast. A number of families are investigated to assess their relative importance. We show that despite the timing of a forecasted dome collapse ranging between several hours of the known timing of collapse, each of the families produces a better forecast in terms of fit to the seismic acceleration data than when using all low frequency seismicity. In addition, we investigate the stability of such families between major dome collapses (1997 and 2003), assessing their potential for use in real-time forecasting. Initial application of Grey's Incidence Analysis suggests that a key parameter influencing the potential for a large scale slumping on the dome of SHV is the rate of low frequency seismicity associated with magma movement and dome growth. We undertook numerical modelling of an andesitic dome with a hydrothermally altered layer down to 800m. The geometry of the dome is based on SHV prior to the collapse of 2003. We show that a critical instability is reached once slope angles exceed 25°, corresponding to a summit height of just over 1100m a.s.l.. The geometry of failure is in close agreement with the identified failure plane suggesting that the input mechanical properties are broadly consistent with reality. We are therefore able to compare different failure geometries based on edifice geomorphology and determine a Factor of Safety associated with such scenarios. This modelling would be extremely useful in a holistic forecasting approach within a volcanic environment. Reference: Voight, B. (1988). A method for prediction of volcanic eruptions. Nature, 332: 125-130.

Molecular Characterization of a Xiphinema hunaniense Population with Morphometric Data of all Four Juvenile Stages

PubMed Central

Wu, Y.; Zheng, J.; Robbins, R. T.

2007-01-01

A population of Xiphinema hunaniense Wang and Wu, 1992 with all four juvenile stages was found in the rhizosphere of Pinus sp. in Hangzhou, Zhejiang, China. Morphometrics of 18 females and 35 juveniles of this population are given herein. Detailed morphology and morphometrics of the four juvenile stages are provided. Further comparisons based on morphometrics of the population with previous studies of the females and the first-stage juveniles of X. hunaniense with X. radicicola are given, and morphological variation in X. hunaniense populations are discussed. A revised polytomous key code of Loof and Luc (1990) for X. hunaniense identification is provided, i.e., A1- B4- C4- D4/5- E1- F2(3)- G2- H2-I3- J4- K2- L1. In addition, the sequence of the D2 and D3 expansion region of the 28S rRNA gene was analyzed and compared with sequences of closely related species downloaded from the NCBI database. Cluster analysis of sequences confirmed and supported the species identifications. PMID:19259473

Capability of applying morphometric parameters of relief in river basins for geomorphological zoning of a territory

NASA Astrophysics Data System (ADS)

Ivanov, M. A.; Yermolaev, O. P.

2018-01-01

Information about morphometric characteristics of relief is necessary for researches devoted to geographic characteristics of territory, its zoning, assessment of erosion processes, geoecological condition and others. For the Volga Federal District for the first time a spatial database of geomorphometric parameters 1: 200 000 scale was created, based on a river basin approach. Watersheds are used as a spatial units created by semi-automated method using the terrain and hydrological modeling techniques implemented in the TAS GIS and WhiteBox GIS. As input data DEMs SRTM and Aster GDEM and hydrographic network vectorized from topographic maps were used. Using DEM highlighted above for each river basin, basic morphometric relief characteristics such as mean height, slope steepness, slope length, height range, river network density and factor LS were calculated. Basins belonging to the geomorphological regions and landscape zones was determined, according to the map of geomorphological zoning and landscape map. Analysis of variance revealed a statistically significant relationship between these characteristics and geomorphological regions and landscape zones. Consequently, spatial trends of changes of analyzed morphometric characteristics were revealed.

A combined morphometric analysis of foot form and its association with sex, stature, and body mass.

PubMed

Domjanic, Jacqueline; Seidler, Horst; Mitteroecker, Philipp

2015-08-01

Morphometric analysis of footprints is a classic means for orthopedic diagnosis. In forensics and physical anthropology, it is commonly used for the estimation of stature and body mass. We studied individual variation and sexual dimorphism of foot dimensions and footprint shape by a combination of classic foot measurements and geometric morphometric methods. Left and right feet of 134 healthy adult males and females were scanned twice with a 3D optical laser scanner, and stature as well as body mass were recorded. Foot length and width were measured on the 3D scans. The 2D footprints were extracted as the plantar-most 2 mm of the 3D scans and measured with 85 landmarks and semilandmarks. Both foot size and footprint shape are sexually dimorphic and relate to stature and body mass. While dimorphism in foot length largely results from dimorphism in stature, dimorphism in footprint shape partly owes to the dimorphism in BMI. Stature could be estimated well based on foot length (R(2)  = 0.76), whereas body mass was more closely related to foot width (R(2)  = 0.62). Sex could be estimated correctly for 95% of the individuals based on a combination of foot width and length. Geometric morphometrics proved to be an effective tool for the detailed analysis of footprint shape. However, for the estimation of stature, body mass, and sex, shape variables did not considerably improve estimates based on foot length and width. © 2015 Wiley Periodicals, Inc.

SLI Complex Curvature Friction Stir Weld Risk Reduction Program

NASA Technical Reports Server (NTRS)

Hartley, Paula J.; Schneider, Jules; Jones, Chip; Lawless, Kirby; Russell, Carolyn

2003-01-01

The Space Launch Initiative Program (SLI) in conjunction with the National Center for Advanced Manufacturing (NCAM) will demonstrate the ability to produce large-scale complex curvature hardware using the self-reacting friction stir welding process. This multi-phased risk reduction program includes friction stir welding process development and manufacture of a 22-ft diameter quarter dome using a conventional tooling approach; it culminates in a 27.5-ft diameter quarter dome demonstration performed on a 5-axis Universal Weld System. The design, fabrication, and installation of the Universal Weld System is made possible through a collaboration between the State of Louisiana, NASA, and the University of New Orleans. The Universal Weld System, manufactured by MTS Systems Corporation, will be installed at the Michoud Assembly Facility in New Orleans, Louisiana, and will be capable of manufacturing domes up to 30 ft in diameter. All welding will be accomplished using the Adaptable Adjustable Pin Tool (AdAPT) weld head and controller manufactured by MTS. Weld parameters will be developed for an aluminum alloy in gauges ranging from 0.320 to 0.400 in. thick. Weld quality will be verified through radiography, mechanical property testing at ambient and LN2 temperatures, and metallurgical analysis. The AdAPT weld head will then be mounted on a 22-ft diameter dome tool, which will be modified to include a welding track and drive system for moving the AdAPT weld head along the weld joint. This tool will then be used to manufacture a 22-ft diameter dome of an aluminum alloy, with 0.320-in. constant thickness joints, consisting of three individual gore panels. Finally, the 27.5-ft diameter quarter dome will be welded on the Universal Weld System. The quarter dome will consist of three individual gore panels with weld lands tapering from 0.320 to 0.360 in. in thickness. With the demonstration of these welds, the ability to manufacture large diameter domes using the friction stir weld process in conjunction with a universal weld system provides a low risk approach to the fabrication of aluminum tanks for future launch vehicle applications.

Evidence for the contemporary magmatic system beneath Long Valley Caldera from local earthquake tomography and receiver function analysis

USGS Publications Warehouse

Seccia, D.; Chiarabba, C.; De Gori, P.; Bianchi, I.; Hill, D.P.

2011-01-01

We present a new P wave and S wave velocity model for the upper crust beneath Long Valley Caldera obtained using local earthquake tomography and receiver function analysis. We computed the tomographic model using both a graded inversion scheme and a traditional approach. We complement the tomographic I/P model with a teleseismic receiver function model based on data from broadband seismic stations (MLAC and MKV) located on the SE and SW margins of the resurgent dome inside the caldera. The inversions resolve (1) a shallow, high-velocity P wave anomaly associated with the structural uplift of a resurgent dome; (2) an elongated, WNW striking low-velocity anomaly (8%–10 % reduction in I/P) at a depth of 6 km (4 km below mean sea level) beneath the southern section of the resurgent dome; and (3) a broad, low-velocity volume (–5% reduction in I/P and as much as 40% reduction in I/S) in the depth interval 8–14 km (6–12 km below mean sea level) beneath the central section of the caldera. The two low-velocity volumes partially overlap the geodetically inferred inflation sources that drove uplift of the resurgent dome associated with caldera unrest between 1980 and 2000, and they likely reflect the ascent path for magma or magmatic fluids into the upper crust beneath the caldera.

Advanced imaging techniques III: a scalable and modular dome illumination system for scientific microphotography on a budget

USDA-ARS?s Scientific Manuscript database

A scalable and modular LED illumination dome for microscopic scientific photography is described and illustrated, and methods for constructing such a dome are detailed. Dome illumination for insect specimens has become standard practice across the field of insect systematics, but many dome designs ...

What factors control the superficial lava dome explosivity?

NASA Astrophysics Data System (ADS)

Boudon, Georges; Balcone-Boissard, Hélène; Villemant, Benoit; Morgan, Daniel J.

2015-04-01

Dome-forming eruption is a frequent eruptive style; lava domes result from intermittent, slow extrusion of viscous lava. Most dome-forming eruptions produce highly microcrystallized and highly- to almost totally-degassed magmas which have a low explosive potential. During lava dome growth, recurrent collapses of unstable parts are the main destructive process of the lava dome, generating concentrated pyroclastic density currents (C-PDC) channelized in valleys. These C-PDC have a high, but localized, damage potential that largely depends on the collapsed volume. Sometimes, a dilute ash cloud surge develops at the top of the concentrated flow with an increased destructive effect because it may overflow ridges and affect larger areas. In some cases, large lava dome collapses can induce a depressurization of the magma within the conduit, leading to vulcanian explosions. By contrast, violent, laterally directed, explosions may occur at the base of a growing lava dome: this activity generates dilute and turbulent, highly-destructive, pyroclastic density currents (D-PDC), with a high velocity and propagation poorly dependent on the topography. Numerous studies on lava dome behaviors exist, but the triggering of lava dome explosions is poorly understood. Here, seven dome-forming eruptions are investigated: in the Lesser Antilles arc: Montagne Pelée, Martinique (1902-1905, 1929-1932 and 650 y. BP eruptions), Soufrière Hills, Montserrat; in Guatemala, Santiaguito (1929 eruption); in La Chaîne des Puys, France (Puy de Dome and Puy Chopine eruptions). We propose a new model of superficial lava-dome explosivity based upon a textural and geochemical study (vesicularity, microcrystallinity, cristobalite distribution, residual water contents, crystal transit times) of clasts produced by these key eruptions. Superficial explosion of a growing lava dome may be promoted through porosity reduction caused by both vesicle flattening due to gas escape and syn-eruptive cristobalite precipitation. Both processes generate an impermeable and rigid carapace allowing overpressurisation of the inner parts of the lava dome by the rapid input of vesiculated magma batches. The thickness of the cristobalite-rich carapace is an inverse function of the external lava dome surface area. Thus the probability of a superficial lava dome explosion inversely depends on its size; explosive activity more likely occurs at the onset of the lava dome extrusion in agreement with observations. We evidence a two-step process in magma ascent with edification of the lava dome that may be accompanied by a rapid ascent of an undegassed batch of magma some days prior the explosive activity. This new result is of interest for the whole volcanological community and for risk management.

Four and eight faceted domes effects on drag force and image in missile application

NASA Astrophysics Data System (ADS)

Sakarya, Doǧan Uǧur

2017-10-01

Drag force effect is an important aspect of range performance in missile applications. Depending on domes geometry, this effect can be decreased. Hemispherical domes have great image uniformity but more drag force has an effect on it. Four and eight faceted domes decrease drag force. However, environment reflections cause a noise in a system. Also depending on the faceted domes shape, sun and other sources in the environment are deformed in the face of them and these deformed objects result in a false target in an image. In this study; hemispherical, four faceted and eight faceted domes are compared with respect to drag force. Furthermore, images are captured by using these manufactured domes. To compare domes effects on images, scenarios are generated and automatic target acquisition algorithm is used.

Predicting Structural Behavior of Filament Wound Composite Pressure Vessel Using Three Dimensional Shell Analysis

NASA Astrophysics Data System (ADS)

Madhavi, M.; Venkat, R.

2014-01-01

Fiber reinforced polymer composite materials with their higher specific strength, moduli and tailorability characteristics will result in reduction of weight of the structure. The composite pressure vessels with integrated end domes develop hoop stresses that are twice longitudinal stresses and when isotropic materials like metals are used for development of the hardware and the material is not fully utilized in the longitudinal/meridional direction resulting in over weight components. The determination of a proper winding angles and thickness is very important to decrease manufacturing difficulties and to increase structural efficiency. In the present study a methodology is developed to understand structural characteristics of filament wound pressure vessels with integrated end domes. Progressive ply wise failure analysis of composite pressure vessel with geodesic end domes is carried out to determine matrix crack failure, burst pressure values at various positions of the shell. A three dimensional finite element analysis is computed to predict the deformations and stresses in the composite pressure vessel. The proposed method could save the time to design filament wound structures, to check whether the ply design is safe for the given input conditions and also can be adapted to non-geodesic structures. The results can be utilized to understand structural characteristics of filament wound pressure vessels with integrated end domes. This approach can be adopted for various applications like solid rocket motor casings, automobile fuel storage tanks and chemical storage tanks. Based on the predictions a composite pressure vessel is designed and developed. Hydraulic test is performed on the composite pressure vessel till the burst pressure.

Radar topography of domes on planetary surfaces

USGS Publications Warehouse

Neish, Catherine D.; Lorenz, R.D.; Kirk, R.L.

2008-01-01

We investigate the possibility of measuring the heights and morphology of viscously emplaced domes using radar imagery. We accurately reproduce the known height and shape of a terrestrial salt dome, and estimate the heights of several venusian pancake domes to within a factor of two. The terrestrial salt dome is consistent with a Bingham flow, while the much larger venusian pancake domes are consistent with a Newtonian flow. Applying the same techniques to Ganesa Macula, a potential cryovolcanic dome on Titan, we estimate a height between 2.0-4.9 km. Additional factors such as variable roughness and composition might account for some of the discrepancies observed. ?? 2008 Elsevier Inc.

Preliminary Cluster Analysis For Several Representatives Of Genus Kerivoula (Chiroptera: Vespertilionidae) in Borneo

NASA Astrophysics Data System (ADS)

Hasan, Noor Haliza; Abdullah, M. T.

2008-01-01

The aim of the study is to use cluster analysis on morphometric parameters within the genus Kerivoula to produce a dendrogram and to determine the suitability of this method to describe the relationship among species within this genus. A total of 15 adult male individuals from genus Kerivoula taken from sampling trips around Borneo and specimens kept at the zoological museum of Universiti Malaysia Sarawak were examined. A total of 27 characters using dental, skull and external body measurements were recorded. Clustering analysis illustrated the grouping and morphometric relationships between the species of this genus. It has clearly separated each species from each other despite the overlapping of measurements of some species within the genus. Cluster analysis provides an alternative approach to make a preliminary identification of a species.

Morphometric variations of laelapine mite (Acari: Mesostigmata) populations infesting small mammals (Mammalia) in Brazil.

PubMed

Martins-Hatano, F; Gettinger, D; Manhães, M L; Bergallo, H G

2012-08-01

The goal of this study was to evaluate the morphometric variation of laelapine populations (Acari, Mesostigmata) associated with neotropical oryzomyine rodents at different geographic localities in Brazil. Three nominal mite species were selected for study, all infesting the pelage of small mammals at different localities in Rio de Janeiro, Espírito Santo, Bahia, and the Federal District, Brazil. To analyse morphometric characteristics, thirty-seven morphological characters distributed across the whole body of each specimen were measured. We use the Analysis of Principal Components, extracting the three first axes and projecting each mite in these axes. Major species level changes in the taxonomy of the host mammals allows an independent examination of morphometric variation of mites infesting a set of distinctly different host species at different geographic localities. Gigantolaelaps vitzthumi and Laelaps differens are associated with oryzomyine rodents of the genus Cerradomys, and consistently showed a tendency to cluster by host phylogeny. Laelaps manguinhosi associated with Nectomys rattus in central Brazil is morphometrically distinct from mites infesting N. squamipes in the coastal restingas of Rio de Janeiro and Espírito Santo. The results obtained here indicate that laelapine mite populations can vary among geographic areas and among phylogenetically related host species. Clearly, the study of these mites at the population level can be an important tool for clarifying the taxonomy of both mites and hosts.

Quantification of Hepcidin-related Iron Accumulation in the Rat Liver.

PubMed

Böser, Preethne; Mordashova, Yulia; Maasland, Mark; Trommer, Isabel; Lorenz, Helga; Hafner, Mathias; Seemann, Dietmar; Mueller, Bernhard K; Popp, Andreas

2016-02-01

Hepcidin was originally detected as a liver peptide with antimicrobial activity and it functions as a central regulator in the systemic iron metabolism. Consequently suppression of hepcidin leads to iron accumulation in the liver. AbbVie developed a monoclonal antibody ([mAb]; repulsive guidance molecule [RGMa/c] mAb) that downregulates hepcidin expression by influencing the RGMc/bone morphogenetic protein (BMP)/neogenin receptor complex and causes iron deposition in the liver. In a dose range finding study with RGMa/c mAb, rats were treated with different dose levels for a total of 4 weekly doses. The results of this morphometric analysis in the liver showed that iron accumulation is not homogenous between liver lobes and the left lateral lobe was the most responsive lobe in the rat. Quantitative hepcidin messenger RNA analysis showed that the left lateral lobe was the most responsive lobe showing hepcidin downregulation with increasing antibody dose. In addition, the morphometric analysis had higher sensitivity than the chemical iron extraction and quantification using a colorimetric assay. In conclusion, the Prussian blue stain in combination with semi-quantitative and quantitative morphometric analysis is the most reliable method to demonstrate iron accumulation in the liver compared to direct measurement of iron in unfixed tissue using a colorimetric assay. © The Author(s) 2016.

Virtual Assessment of Sex: Linear and Angular Traits of the Mandibular Ramus Using Three-Dimensional Computed Tomography.

PubMed

Inci, Ercan; Ekizoglu, Oguzhan; Turkay, Rustu; Aksoy, Sema; Can, Ismail Ozgur; Solmaz, Dilek; Sayin, Ibrahim

2016-10-01

Morphometric analysis of the mandibular ramus (MR) provides highly accurate data to discriminate sex. The objective of this study was to demonstrate the utility and accuracy of MR morphometric analysis for sex identification in a Turkish population.Four hundred fifteen Turkish patients (18-60 y; 201 male and 214 female) who had previously had multidetector computed tomography scans of the cranium were included in the study. Multidetector computed tomography images were obtained using three-dimensional reconstructions and a volume-rendering technique, and 8 linear and 3 angular values were measured. Univariate, bivariate, and multivariate discriminant analyses were performed, and the accuracy rates for determining sex were calculated.Mandibular ramus values produced high accuracy rates of 51% to 95.6%. Upper ramus vertical height had the highest rate at 95.6%, and bivariate analysis showed 89.7% to 98.6% accuracy rates with the highest ratios of mandibular flexure upper border and maximum ramus breadth. Stepwise discrimination analysis gave a 99% accuracy rate for all MR variables.Our study showed that the MR, in particular morphometric measures of the upper part of the ramus, can provide valuable data to determine sex in a Turkish population. The method combines both anthropological and radiologic studies.

Applications of wavelets in morphometric analysis of medical images

NASA Astrophysics Data System (ADS)

Davatzikos, Christos; Tao, Xiaodong; Shen, Dinggang

2003-11-01

Morphometric analysis of medical images is playing an increasingly important role in understanding brain structure and function, as well as in understanding the way in which these change during development, aging and pathology. This paper presents three wavelet-based methods with related applications in morphometric analysis of magnetic resonance (MR) brain images. The first method handles cases where very limited datasets are available for the training of statistical shape models in the deformable segmentation. The method is capable of capturing a larger range of shape variability than the standard active shape models (ASMs) can, by using the elegant spatial-frequency decomposition of the shape contours provided by wavelet transforms. The second method addresses the difficulty of finding correspondences in anatomical images, which is a key step in shape analysis and deformable registration. The detection of anatomical correspondences is completed by using wavelet-based attribute vectors as morphological signatures of voxels. The third method uses wavelets to characterize the morphological measurements obtained from all voxels in a brain image, and the entire set of wavelet coefficients is further used to build a brain classifier. Since the classification scheme operates in a very-high-dimensional space, it can determine subtle population differences with complex spatial patterns. Experimental results are provided to demonstrate the performance of the proposed methods.

Copper treatment of the digestive gland of the slug Arion ater L. 2. Morphometrics and histophysiology

DOE Office of Scientific and Technical Information (OSTI.GOV)

Marigomez, J.A.; Angulo, E.; Moya, J.

1986-04-01

In order to have a clear image of processes involved in copper bioaccumulation-detoxication mechanisms in the terrestrial slug, Arion ater, the authors planned a histophysiological analysis based on morphometrics and on the variations in morphological characteristics of epithelia. This study is the completion of the histochemical analysis, in which the authors suggest a close relationship between copper and calcium in the digestive gland of Arion ater. They had observed that copper was exclusively stored within calcium cells and that calcium cells secretion was more intensive at higher copper dosages and at larger bioassay times. Therefore, histophysiological analysis was necessary formore » explaining the nature of copper bioaccumulation-detoxication mechanisms.« less

Improving daylight in mosques using domes

DOE Office of Scientific and Technical Information (OSTI.GOV)

Alturki, I.; Schiler, M.; Boyajian, Y.

1996-10-01

This paper studies the possibilities for improving daylight in mosques by measuring the illumination level under various domes in an old mosque ``Mosque of Guzelce Hasan Bey in Hayrabolu`` using an architectural physical model. The illumination level under the domes were tested under three different cases: a dome without openings (the original building), a dome with a central opening, and a dome with openings around the base. It was found that a dome with openings around the base brings an evenly distributed light all over the prayer hall during the critical hours of 12:00 p.m. and 3:00 p.m. In addition,more » it improves the quality and quantity of light.« less

A Volume Flux Approach to Cryolava Dome Emplacement on Europa

NASA Technical Reports Server (NTRS)

Quick, Lynnae C.; Fagents, Sarah A.; Hurford, Terry A.; Prockter, Louise M.

2017-01-01

We previously modeled a subset of domes on Europa with morphologies consistent with emplacement by viscous extrusions of cryolava. These models assumed instantaneous emplacement of a fixed volume of fluid onto the surface, followed by relaxation to form domes. However, this approach only allowed for the investigation of late-stage eruptive processes far from the vent and provided little insight into how cryolavas arrived at the surface. Consideration of dome emplacement as cryolavas erupt at the surface is therefore pertinent. A volume flux approach, in which lava erupts from the vent at a constant rate, was successfully applied to the formation of steep-sided volcanic domes on Venus. These domes are believed to have formed in the same manner as candi-date cryolava domes on Europa. In order to gain a more complete understanding of the potential for the emplacement of Europa domes via extrusive volcanism, we have applied this new volume flux approach to the formation of putative cryovolcanic domes on Europa. Assuming as in that europan cryolavas are briny, aqueous solutions which may or may not contain some ice crystal fraction, we present the results of this modeling and explore theories for the formation of low-albedo moats that surround some domes.

Predicting optical and thermal characteristics of transparent single-glazed domed skylights

DOE Office of Scientific and Technical Information (OSTI.GOV)

Laouadi, A.; Atif, M.R.

1999-07-01

Optical and thermal characteristics of domed skylights are important to solve the trade-off between daylighting and thermal design. However, there is a lack of daylighting and thermal design tools for domed skylights. Optical and thermal characteristics of transparent single-glazed hemispherical domed skylights under sun and sky light are evaluated based on an optical model for domed skylights. The optical model is based on tracing the beam and diffuse radiation transmission through the dome surface. A simple method is proposed to replace single-glazed hemispherical domed skylights by optically and thermally equivalent single-glazed planar skylights to accommodate limitations of energy computer programs.more » Under sunlight, single-glazed hemispherical domed skylights yield slightly lower equivalent solar transmittance and solar heat gain coefficient (SHGC) at near normal zenith angles than those of single-glazed planar skylights. However, single-glazed hemispherical domed skylights yield substantially higher equivalent solar transmittance and SHGC at high zenith angles and around the horizon. Under isotropic skylight, single-glazed hemispherical domed skylights yield slightly lower equivalent solar transmittance and SHGC than those of single-glazed planar skylights. Daily solar heat gains of single-glazed hemispherical domed skylights are higher than those of single-glazed horizontal planar skylights in both winter and summer. In summer, the solar heat gain of single-glazed hemispherical domed skylights can reach 3% to 9% higher than those of horizontal single-glazed planar skylights for latitudes varying between 0 and 55{degree} (north/south). In winter, however, the solar heat gains of single-glazed hemispherical domed skylights increase significantly with the increase of the site latitude and can reach 232% higher than those of horizontal single-glazed planar skylights, particularly for high latitude countries.« less

Using analog flow experiments to model morphologies developed during episodic dome growth: A case study of Mount St Helens, 1980-1986

NASA Astrophysics Data System (ADS)

Altman, K. M.; Teasdale, R.

2009-12-01

From 1980 to 1986 the dacite dome at Mount St. Helens was emplaced as a series of 17 events, identified by different growth rates, volumes, height to diameter ratios, emplacement rates, surface textures and dome morphologies (Swanson, 1989). Rates of emplacement characterize three periods; between October 18, 1980 and the end of 1981 the growth rate was 1.8 x 10^6 m^3/month; between March 1982 and March 1984 the growth rate was 1.3 x 10^6 m^3/month; followed by a growth rate of 0.62 x 10^6 m^3/month until the end of the emplacement events in 1986 (Swanson, 1989). The shape of the dome changed from 1980 to 1986 as a function of magma viscosity, tensile strength of the hot core, and thickness of the outer shell (Swanson, 1989). The height to diameter ratios (h:d) recorded throughout the growth of the dome have been used to quantify the changes in the shape of the dome. The dome was flatter during the first period of emplacement when larger volumes kept the dome hotter and hindered the formation of a thick, cool outer crust (Swanson, 1989). Once the growth rate slowed by June 1981, a thick skin had formed and allowed the dome to steepen (Swanson, 1989). Analog models presented here aim to reproduce the emplacement of the domes based on observations and data recorded at Mount St. Helens from 1980 to 1986. Flow experiments use a slurry of PEG (poly-ethelyne glycol) mixed with kaolin powder that is pumped into a tank of cold water (Fink and Griffiths, 1998). PEG is used because it is liquid at room temperature and solidifies in the cold water. Kaolin powder is added to the PEG to simulate the viscosity of the dacite domes. The observed and recorded data from Mount St. Helens are used to constrain analog flow model parameters such as slope, effusion rate, and PEG viscosity in an attempt to recreate the dome morphologies observed in the 1980 to 1986 episodes. As expected, dome morphology in experiments varies with the crustal thickness developed during experiments. The thickness of dome crust increases when the difference between water temperature and the slurry are large. Dome crust thickness controls the h:d ratio, which are used here to characterize dome morphology. The h:d ratio of experiments are within 5% of those measured at Mount St. Helens, so are considered good representations of dome growth events. Ongoing work investigates multiple episodes of dome emplacement using solid structures in the tanks to represent previously emplaced dome edifices.

VARSEDIG: an algorithm for morphometric characters selection and statistical validation in morphological taxonomy.

PubMed

Guisande, Cástor; Vari, Richard P; Heine, Jürgen; García-Roselló, Emilio; González-Dacosta, Jacinto; Perez-Schofield, Baltasar J García; González-Vilas, Luis; Pelayo-Villamil, Patricia

2016-09-12

We present and discuss VARSEDIG, an algorithm which identifies the morphometric features that significantly discriminate two taxa and validates the morphological distinctness between them via a Monte-Carlo test. VARSEDIG is freely available as a function of the RWizard application PlotsR (http://www.ipez.es/RWizard) and as R package on CRAN. The variables selected by VARSEDIG with the overlap method were very similar to those selected by logistic regression and discriminant analysis, but overcomes some shortcomings of these methods. VARSEDIG is, therefore, a good alternative by comparison to current classical classification methods for identifying morphometric features that significantly discriminate a taxon and for validating its morphological distinctness from other taxa. As a demonstration of the potential of VARSEDIG for this purpose, we analyze morphological discrimination among some species of the Neotropical freshwater family Characidae.

Fluid flow in the resurgent dome of Long Valley Caldera: Implications from thermal data and deep electrical sounding

USGS Publications Warehouse

Pribnow, D.F.C.; Schutze, C.; Hurter, S.J.; Flechsig, C.; Sass, J.H.

2003-01-01

Temperatures of 100??C are measured at 3 km depth in a well located on the resurgent dome in the center of Long Valley Caldera, California, despite an assumed >800??C magma chamber at 6-8 km depth. Local downflow of cold meteoric water as a process for cooling the resurgent dome is ruled out by a Pecle??t-number analysis of temperature logs. These analyses reveal zones with fluid circulation at the upper and lower boundaries of the Bishop Tuff, and an upflow zone in the metasedimentary rocks. Vertical Darcy velocities range from 10 to 70 cm a-1. A 21-km-long geoelectrical profile across the caldera provides resistivity values to the order of 100 to >103 ??m down to a depth of 6 km, as well as variations of self-potential. Interpretation of the electrical data with respect to hydrothermal fluid movement confirms that there is no downflow beneath the resurgent dome. To explain the unexpectedly low temperatures in the resurgent dome, we challenge the common view that the caldera as a whole is a regime of high temperatures and the resurgent dome is a local cold anomaly. Instead, we suggest that the caldera was cooled to normal thermal conditions by vigorous hydrothermal activity in the past, and that a present-day hot water flow system is responsible for local hot anomalies, such as Hot Creek and the area of the Casa Diablo geothermal power plant. The source of hot water has been associated with recent shallow intrusions into the West Moat. The focus of planning for future power plants should be to locate this present-day flow system instead of relying on heat from the old magma chamber. ?? 2003 Elsevier B.V. All rights reserved.

Fluid flow in the resurgent dome of Long Valley Caldera: implications from thermal data and deep electrical sounding

NASA Astrophysics Data System (ADS)

Pribnow, Daniel F. C.; Schütze, Claudia; Hurter, Suzanne J.; Flechsig, Christina; Sass, John H.

2003-10-01

Temperatures of 100°C are measured at 3 km depth in a well located on the resurgent dome in the center of Long Valley Caldera, California, despite an assumed >800°C magma chamber at 6-8 km depth. Local downflow of cold meteoric water as a process for cooling the resurgent dome is ruled out by a Peclét-number analysis of temperature logs. These analyses reveal zones with fluid circulation at the upper and lower boundaries of the Bishop Tuff, and an upflow zone in the metasedimentary rocks. Vertical Darcy velocities range from 10 to 70 cm a -1. A 21-km-long geoelectrical profile across the caldera provides resistivity values to the order of 10 0 to >10 3 Ωm down to a depth of 6 km, as well as variations of self-potential. Interpretation of the electrical data with respect to hydrothermal fluid movement confirms that there is no downflow beneath the resurgent dome. To explain the unexpectedly low temperatures in the resurgent dome, we challenge the common view that the caldera as a whole is a regime of high temperatures and the resurgent dome is a local cold anomaly. Instead, we suggest that the caldera was cooled to normal thermal conditions by vigorous hydrothermal activity in the past, and that a present-day hot water flow system is responsible for local hot anomalies, such as Hot Creek and the area of the Casa Diablo geothermal power plant. The source of hot water has been associated with recent shallow intrusions into the West Moat. The focus of planning for future power plants should be to locate this present-day flow system instead of relying on heat from the old magma chamber.

Automated Morphological and Morphometric Analysis of Mass Spectrometry Imaging Data: Application to Biomarker Discovery

NASA Astrophysics Data System (ADS)

Picard de Muller, Gaël; Ait-Belkacem, Rima; Bonnel, David; Longuespée, Rémi; Stauber, Jonathan

2017-12-01

Mass spectrometry imaging datasets are mostly analyzed in terms of average intensity in regions of interest. However, biological tissues have different morphologies with several sizes, shapes, and structures. The important biological information, contained in this highly heterogeneous cellular organization, could be hidden by analyzing the average intensities. Finding an analytical process of morphology would help to find such information, describe tissue model, and support identification of biomarkers. This study describes an informatics approach for the extraction and identification of mass spectrometry image features and its application to sample analysis and modeling. For the proof of concept, two different tissue types (healthy kidney and CT-26 xenograft tumor tissues) were imaged and analyzed. A mouse kidney model and tumor model were generated using morphometric - number of objects and total surface - information. The morphometric information was used to identify m/z that have a heterogeneous distribution. It seems to be a worthwhile pursuit as clonal heterogeneity in a tumor is of clinical relevance. This study provides a new approach to find biomarker or support tissue classification with more information. [Figure not available: see fulltext.

The crowding effect and morphometric variability in Echinostoma caproni (Digenea: Echinostomatidae) from ICR mice.

PubMed

Stillson, Lindsey L; Platt, Thomas R

2007-04-01

Population density, or crowding, was examined to determine its effect on the morphometric variability of Echinostoma caproni (Digenea) in ICR mice. Six mice were infected with 25 and 100 metacercariae, and a single mouse was infected with 300 metacercariae. All mice were infected at necropsy 22 days postinfection with recoveries of 77%, 69%, and 7.3%, respectively. Whole mounts were prepared, and 31 characters were evaluated (25 direct measurements and 6 ratios). Univariate and multivariate statistical analysis revealed significant differences between adult worms from all 3 groups. Twenty-seven of 31 characters showed significant within-group differences, with the primary differences between worms from 25/100 versus 300 metacercariae infections. Discriminant function analysis yielded a 100% correct classification based on infection size, which is consistent with studies on distinct species of Echinostoma. The low recovery from the mouse infected with 300 metacercariae suggests inflammatory expulsion of juvenile worms and the possibility of immunity as a factor in the crowding effect. These results suggest that external factors may affect morphometric variability of digenetic trematodes to a larger degree than previously recognized.

Measuring body composition in dogs using multifrequency bioelectrical impedance analysis and dual energy X-ray absorptiometry.

PubMed

Rae, L S; Vankan, D M; Rand, J S; Flickinger, E A; Ward, L C

2016-06-01

Thirty-five healthy, neutered, mixed breed dogs were used to determine the ability of multifrequency bioelectrical impedance analysis (MFBIA) to predict accurately fat-free mass (FFM) in dogs using dual energy X-ray absorptiometry (DXA)-measured FFM as reference. A second aim was to compare MFBIA predictions with morphometric predictions. MFBIA-based predictors provided an accurate measure of FFM, within 1.5% when compared to DXA-derived FFM, in normal weight dogs. FFM estimates were most highly correlated with DXA-measured FFM when the prediction equation included resistance quotient, bodyweight, and body condition score. At the population level, the inclusion of impedance as a predictor variable did not add substantially to the predictive power achieved with morphometric variables alone; in individual dogs, impedance predictors were more valuable than morphometric predictors. These results indicate that, following further validation, MFBIA could provide a useful tool in clinical practice to objectively measure FFM in canine patients and help improve compliance with prevention and treatment programs for obesity in dogs. Copyright © 2016. Published by Elsevier Ltd.

Comparative multivariate analysis of biometric traits of West African Dwarf and Red Sokoto goats.

PubMed

Yakubu, Abdulmojeed; Salako, Adebowale E; Imumorin, Ikhide G

2011-03-01

The population structure of 302 randomly selected West African Dwarf (WAD) and Red Sokoto (RS) goats was examined using multivariate morphometric analyses. This was to make the case for conservation, rational management and genetic improvement of these two most important Nigerian goat breeds. Fifteen morphometric measurements were made on each individual animal. RS goats were superior (P<0.05) to the WAD for the body size and skeletal proportions investigated. The phenotypic variability between the two breeds was revealed by their mutual responses in the principal components. While four principal components were extracted for WAD goats, three components were obtained for their RS counterparts with variation in the loading traits of each component for each breed. The Mahalanobis distance of 72.28 indicated a high degree of spatial racial separation in morphology between the genotypes. The Ward's option of the cluster analysis consolidated the morphometric distinctness of the two breeds. Application of selective breeding to genetic improvement would benefit from the detected phenotypic differentiation. Other implications for management and conservation of the goats are highlighted.

Phenotypes of intermediate forms of Fasciola hepatica and F. gigantica in buffaloes from Central Punjab, Pakistan.

PubMed

Afshan, K; Valero, M A; Qayyum, M; Peixoto, R V; Magraner, A; Mas-Coma, S

2014-12-01

Fascioliasis is an important food-borne parasitic disease caused by the two trematode species, Fasciola hepatica and Fasciola gigantica. The phenotypic features of fasciolid adults and eggs infecting buffaloes inhabiting the Central Punjab area, Pakistan, have been studied to characterize fasciolid populations involved. Morphometric analyses were made with a computer image analysis system (CIAS) applied on the basis of standardized measurements. Since it is the first study of this kind undertaken in Pakistan, the results are compared to pure fasciolid populations: (a) F. hepatica from the European Mediterranean area; and (b) F. gigantica from Burkina Faso; i.e. geographical areas where both species do not co-exist. Only parasites obtained from bovines were used. The multivariate analysis showed that the characteristics, including egg morphometrics, of fasciolids from Central Punjab, Pakistan, are between F. hepatica and F. gigantica standard populations. Similarly, the morphometric measurements of fasciolid eggs from Central Punjab are also between F. hepatica and F. gigantica standard populations. These results demonstrate the existence of fasciolid intermediate forms in endemic areas in Pakistan.

Piezoelectric loudspeaker

NASA Technical Reports Server (NTRS)

Regan, Curtis Randall (Inventor); Jalink, Antony, Jr. (Inventor); Hellbaum, Richard F. (Inventor); Rohrbach, Wayne W. (Inventor)

1994-01-01

A piezoelectric loudspeaker suitable for midrange frequencies uses a dome shaped piezoelectric actuator to drive a speaker membrane directly. The dome shaped actuator is made from a reduced and internally biased oxygen wafer, and generates excursion of the apex of the dome in the order of 0.02 - 0.05 inches when a rated drive voltage of 350 V rms is applied between the convex and the concave surfaces of the dome shaped actuator. The load capacity exceeds 10 lbs. The edge of the rim of the dome shaped actuator must be free to rock when the dome height varies to ensure low distortion in the loudspeaker. This is achieved by mounting the rim of the dome shaped actuator on a support surface by prestress only. An exceptionally simple design uses a planar speaker membrane with the center part of one side pressed against the rim of a dome shaped actuator by prestress from a stretched latex surround member.

High Displacement Solid State Ferroelectric Loudspeaker

NASA Technical Reports Server (NTRS)

Regan, Curtis R. (Inventor); Jalink, Antony, Jr. (Inventor); Hellbaum, Richard F. (Inventor); Rohrbach, Wayne W. (Inventor)

1998-01-01

A piezoelectric loudspeaker suitable for midrange frequencies uses a dome shaped piezoelectric actuator to a speaker membrane directly is discussed. The dome shaped actuator is made from a reduced and internally biased oxygen wafer, and generates excursion of the apex of the dome in the order of 0.02-0.05 inches when a rated drive voltage of 350 V rms is applied between the convex and the concave surface of the dome shaped actuator. The load capacity exceeds 10 lbs. The edge of the rim of the dome shaped actuator must be free to rock when the dome height varies to ensure low distortion in the loudspeaker. This is achieved by mounting the rim of the dome shaped actuator on a support surface by prestress only. An exceptionally simple design uses a planar speaker membrane with the center part of one side pressed against the rim of a dome shaped actuator by prestress from a stretched latex surround member.

Origin of the Lyme Dome and implications for the timing of multiple Alleghanian deformational and intrusive events in southern Connecticut

USGS Publications Warehouse

Walsh, G.J.; Aleinikoff, J.N.; Wintsch, R.P.

2007-01-01

Geologic mapping, structural analysis, and geochronology in the area of the Lyme dome, southern Connecticut provides constraints on the origin of the rocks in the core of the dome, the absolute timing of the principal deformational and thermal events attributed to Alleghanian orogenesis, and the processes that generated the dome. Detrital zircon geochronology in combination with ages on intrusive rocks brackets the deposition of quartzite in the core of the dome sometime between ca. 925 and 620 Ma. Granite and granodiorite intruded the Neoproteorozic metasedimentary rocks in the core of the dome at ca. 620 to 610 Ma. Four major early Permian events associated with the Alleghanian orogeny affected the rocks in the Lyme dome area. Syn-tectonic migmatization and widespread penetrative deformation (D1, ca. 300 - 290 Ma) included emplacement of alaskite at 290 ?? 4 Ma during regional foliation development and aluminosilicate-orthoclase metamorphic conditions. Rocks of the Avalon terrane may have wedged between Gander cover rocks and Gander basement in the core of the Lyme during D1. Limited structural evidence for diapiric uplift of the Lyme dome indicates that diapirism started late in D1 and was completed by D2 (ca. 290 - 280 Ma) when horizontal WNW contractional stresses dominated over vertical stresses. Second sillimanite metamorphism continued and syn-tectonic D2 granite pegmatite (288 ?? 4 Ma) and the Joshua Rock Granite Gniess (284 ?? 3 Ma) intruded at this time. North-northwest extension during D3 (ca. 280 - 275 Ma) led to granitic pegmatite intrusion along S3 cleavage planes and in extensional zones in boudin necks during hydraulic failure and decompression melting. Intrusion of a Westerly Granite dike at 275 ?? 4 Ma suggests that D3 extension was active, and perhaps concluding, by ca. 275 Ma. Late randomly oriented but gently dipping pegmatite dikes record a final stage of intrusion during D4 (ca. 275 - 260 Ma), and a switch from NNW extension to vertical unloading and exhumation. Monazite and metamorphic zircon rim ages record this event at ca. 259 Ma. The evolution of the Lyme dome involved D1 mylonitization, intrusion, and migmatization during north-directed contraction, limited late D1 diapirism, D2 migmatization during WNW contraction with associated flexural flow and fold interference, D3 NNW horizontal extension and decompression melting, and final D4 vertical extension and rapid exhumation. Late regional uplift, extension, and normal faulting at higher crustal levels may have been caused by diapiric rise of the lower crust, below the structural level of the Lyme dome. The rocks record no evidence of Acadian metamorphism or deformation, suggesting that the Gander zone here was not tectonically juxtaposed with Avalon until the Alleghanian orogeny.

Structural Optimization of the Retractable Dome for Four Meter Telescope (FMT)

NASA Astrophysics Data System (ADS)

Pan, Nian; Li, Yuxi; Fan, Yue; Ma, Wenli; Huang, Jinlong; Jiang, Ping; Kong, Sijie

2017-03-01

Dome seeing degrades the image quality of ground-based telescopes. To achieve dome seeing of the Four Meter Telescope (FMT) less than 0.5 arcsec, structural optimizations based on computational fluid dynamics (CFD) simulation were proposed. The results of the simulation showed that dome seeing of FMT was 0.42 arcsec, which was mainly caused by the slope angle of the dome when the slope angle was 15° and the wind speed was 10 m/s. Furthermore, the lower the air speed was, the less dome seeing would be. Wind tunnel tests (WT) with a 1:120 scaled model of the retractable dome and FMT indicated that the calculated deviations of the CFD simulation used in this paper were less than 20% and the same variations of the refractive index derived from the WT would be a convincing argument for the validity of the simulations. Thus, the optimization of the retractable dome was reliable and the method expressed in this paper provided a reference for the design of next generation of ground-based telescope dome.

Three-dimensional (3D) geometric morphometric analysis of human premolars to assess sexual dimorphism and biological ancestry in Australian populations.

PubMed

Yong, Robin; Ranjitkar, Sarbin; Lekkas, Dimitra; Halazonetis, Demetrios; Evans, Alistair; Brook, Alan; Townsend, Grant

2018-06-01

This study aimed to investigate size and shape variation of human premolars between Indigenous Australians and Australians of European ancestry, and to assess whether sex and ancestry could be differentiated between these groups using 3D geometric morphometrics. Seventy dental casts from each group, equally subdivided by sex, were scanned using a structured-light scanner. The 3D meshes of upper and lower premolars were processed using geometric morphometric methods. Seventy-two landmarks were recorded for upper premolars and 50 landmarks for lower premolars. For each tooth type, two-way ANOVA was used to assess group differences in centroid size. Shape variations were explored using principal component analysis and visualized using 3D morphing. Two-way Procrustes ANOVA was applied to test group differences for ancestry and sex, and a "leave-one-out" discriminant function was applied to assess group assignment. Centroid size and shape did not display significant difference between the sexes. Centroid size was larger in Indigenous Australians for upper premolars and lower second premolars compared to the Australians of European ancestry. Significant shape variation was noted between the two ancestral groups for upper premolars and the lower first premolar. Correct group assignment of individual teeth to their ancestral groups ranged between 80.0 and 92.8% for upper premolars and 60.0 and 75.7% for lower premolars. Our findings provide evidence of significant size and shape variation in human premolars between the two ancestral groups. High classification rates based on shape analysis of upper premolars highlight potential application of geometric morphometrics in anthropological, bioarcheological and forensic contexts. © 2018 Wiley Periodicals, Inc.

Quantitative pathology in virtual microscopy: history, applications, perspectives.

PubMed

Kayser, Gian; Kayser, Klaus

2013-07-01

With the emerging success of commercially available personal computers and the rapid progress in the development of information technologies, morphometric analyses of static histological images have been introduced to improve our understanding of the biology of diseases such as cancer. First applications have been quantifications of immunohistochemical expression patterns. In addition to object counting and feature extraction, laws of thermodynamics have been applied in morphometric calculations termed syntactic structure analysis. Here, one has to consider that the information of an image can be calculated for separate hierarchical layers such as single pixels, cluster of pixels, segmented small objects, clusters of small objects, objects of higher order composed of several small objects. Using syntactic structure analysis in histological images, functional states can be extracted and efficiency of labor in tissues can be quantified. Image standardization procedures, such as shading correction and color normalization, can overcome artifacts blurring clear thresholds. Morphometric techniques are not only useful to learn more about biological features of growth patterns, they can also be helpful in routine diagnostic pathology. In such cases, entropy calculations are applied in analogy to theoretical considerations concerning information content. Thus, regions with high information content can automatically be highlighted. Analysis of the "regions of high diagnostic value" can deliver in the context of clinical information, site of involvement and patient data (e.g. age, sex), support in histopathological differential diagnoses. It can be expected that quantitative virtual microscopy will open new possibilities for automated histological support. Automated integrated quantification of histological slides also serves for quality assurance. The development and theoretical background of morphometric analyses in histopathology are reviewed, as well as their application and potential future implementation in virtual microscopy. Copyright © 2012 Elsevier GmbH. All rights reserved.

Morphometric analysis of a fresh simple crater on the Moon.

NASA Astrophysics Data System (ADS)

Vivaldi, V.; Ninfo, A.; Massironi, M.; Martellato, E.; Cremonese, G.

In this research we are proposing an innovative method to determine and quantify the morphology of a simple fresh impact crater. Linné is a well preserved impact crater of 2.2 km in diameter, located at 27.7oN 11.8oE, near the western edge of Mare Serenitatis on the Moon. The crater was photographed by the Lunar Orbiter and the Apollo space missions. Its particular morphology may place Linné as the most striking example of small fresh simple crater. Morphometric analysis, conducted on recent high resolution DTM from LROC (NASA), quantitatively confirmed the pristine morphology of the crater, revealing a clear inner layering which highlight a sequence of lava emplacement events.

Aneurysm permeability following coil embolization: packing density and coil distribution.

PubMed

Chueh, Ju-Yu; Vedantham, Srinivasan; Wakhloo, Ajay K; Carniato, Sarena L; Puri, Ajit S; Bzura, Conrad; Coffin, Spencer; Bogdanov, Alexei A; Gounis, Matthew J

2015-09-01

Rates of durable aneurysm occlusion following coil embolization vary widely, and a better understanding of coil mass mechanics is desired. The goal of this study is to evaluate the impact of packing density and coil uniformity on aneurysm permeability. Aneurysm models were coiled using either Guglielmi detachable coils or Target coils. The permeability was assessed by taking the ratio of microspheres passing through the coil mass to those in the working fluid. Aneurysms containing coil masses were sectioned for image analysis to determine surface area fraction and coil uniformity. All aneurysms were coiled to a packing density of at least 27%. Packing density, surface area fraction of the dome and neck, and uniformity of the dome were significantly correlated (p<0.05). Hence, multivariate principal components-based partial least squares regression models were used to predict permeability. Similar loading vectors were obtained for packing and uniformity measures. Coil mass permeability was modeled better with the inclusion of packing and uniformity measures of the dome (r(2)=0.73) than with packing density alone (r(2)=0.45). The analysis indicates the importance of including a uniformity measure for coil distribution in the dome along with packing measures. A densely packed aneurysm with a high degree of coil mass uniformity will reduce permeability. Published by the BMJ Publishing Group Limited. For permission to use (where not already granted under a licence) please go to http://group.bmj.com/group/rights-licensing/permissions.

The LSST Dome final design

NASA Astrophysics Data System (ADS)

DeVries, J.; Neill, D. R.; Barr, J.; De Lorenzi, Simone; Marchiori, Gianpietro

2016-07-01

The Large Synoptic Survey Telescope (LSST) is a large (8.4 meter) wide-field (3.5 degree) survey telescope, which will be located on the Cerro Pachón summit in Chile 1. As a result of the Telescope wide field of view, the optical system is unusually susceptible to stray light 2. In addition, balancing the effect of wind induced telescope vibrations with Dome seeing is crucial. The rotating enclosure system (Dome) includes a moving wind screen and light baffle system. All of the Dome vents include hinged light baffles, which provide exceptional Dome flushing, stray light attenuation, and allows for vent maintenance access from inside the Dome. The wind screen also functions as a light screen, and helps define a clear optical aperture for the Telescope. The Dome must operate continuously without rotational travel limits to accommodate the Telescope cadence and travel. Consequently, the Azimuth drives are located on the fixed lower enclosure to accommodate glycol water cooling without the need for a utility cable wrap. An air duct system aligns when the Dome is in its parked position, and this provides air cooling for temperature conditioning of the Dome during the daytime. A bridge crane and a series of ladders, stairs and platforms provide for the inspection, maintenance and repair of all of the Dome mechanical systems. The contract to build the Dome was awarded to European Industrial Engineering in Mestre, Italy in May 2015. In this paper, we present the final design of this telescope and site sub-system.

Morphometric analysis with open source software to explore shallow hydrogeological features in Senegal and Guinea

NASA Astrophysics Data System (ADS)

Fussi, Fabio; Di Leo, Margherita; Bonomi, Tullia; Di Mauro, Biagio; Fava, Francesco; Fumagalli, Letizia; Hamidou Kane, Cheikh; Faye, Gayane; Niang, Magatte; Wade, Souleye; Hamidou, Barry; Colombo, Roberto

2015-04-01

Water represents a vital resource for everyone on this Planet, but, for some populations, the access to potable water is not given for granted. Recently, the interest in low cost technical solutions to improve access to ground water in developing countries, especially for people located in remote areas, has increased. Manual drilling (techniques to drill boreholes for water using human or animal power) is well known and practiced for centuries in many countries and represents a valid alternative to increase water access. Lately, this practice has raised the attention of national governments and international organizations. This technique is applicable only where hydrogeological conditions are suitable, namely in presence of thick layers of unconsolidated sediments and a shallow water table Aim of this study is exploring the potential of morphometric analysis to improve the methodology to identify areas with suitable hydrogeological conditions for manual drilling, supporting the implementation of water supply programs that can have great impact on living condition of the population. The characteristics of shallow geological layers are strongly dependent from geomorphological processes and are usually reflected in the morphological characteristics of landforms. Under these hypotheses, we have been investigating the geo-statistical correlation between several morphometric variables and a set of hydrogeological variables used in the estimation of suitability for manual drilling: thickness of unconsolidated sediments, texture, hydraulic conductivity of shallow aquifer, depth of water table. The morphology of two study areas with different landscape characteristics in Guinea and Senegal has been investigated coupling the Free and Open Source Software GRASS GIS and R. Several morphometric parameters have been extracted from ASTER GDEM digital elevation model, and have been compared with a set of hydrogeological characteristics obtained from semi-automatic analysis of stratigraphic logs from water boreholes. We observed the relationships between the spatial distribution of hydrogeological features and the morphology, applying multivariate statistical analysis. The ultimate goal of this study is to infer hydrogeological information of shallow aquifers, exploiting morphometric parameters (together with other layers of information from existing thematic maps and remote sensing) and to reconstruct the geometry and the characteristic of shallow porous aquifer. This research is part of a larger project financed by NERC (National Environment Research Council, UK) in the framework of the program UPGRO (Unlocking the Potential of Groundwater for the Poors), with the collaboration of different partners from Italy, Senegal and Guinea

Salt-dome-related diagenesis of Miocene sediment, Black Bayou field, Cameron Parish, Louisiana

DOE Office of Scientific and Technical Information (OSTI.GOV)

Leger, W.R.

1988-09-01

The Black Bayou field is associated with a salt dome that pierces Miocene sediment and rises to within 900 ft (275 m) of the surface. The Louisiana Gulf Coast regional geothermal gradient is locally affected by the salt dome. The gradient increases to values greater than the regional gradient, 1.26/degrees/F/100 ft (23/degrees/C/km), near the dome. Local effects of the salt dome on clastic diagenesis have been determined by studying sandstone samples adjacent to and away from the salt dome within Miocene sediment. Sample depths range from 4155 to 6145 ft (1266 to 1873 m). Distances of samples from the edgemore » of the dome range from 82 to 820 ft (25 to 250 m).« less

Morphometric analysis of the Marmara Sea river basins, Turkey

NASA Astrophysics Data System (ADS)

Elbaşı, Emre; Ozdemir, Hasan

2014-05-01

The drainage basin, the fundamental unit of the fluvial landscape, has been focus of research aimed at understanding the geometric characteristics of the master channel and its tributary network. This geometry is referred to as the basin morphometry and is nicely reviewed by Abrahams (1984). A great amount of research has focused on geometric characteristic of drainage basins, including the topology of the stream networks, and quantitative description of drainage texture, pattern, shape, and relief characteristics. Evaluation of morphometric parameters necessitates the analysis of various drainage parameters such as ordering of the various streams, measurement of basin area and perimeter, length of drainage channels, drainage density (Dd), stream frequency (Fs), bifurcation ratio (Rb), texture ratio (T), basin relief (Bh), Ruggedness number (Rn), time of concentration (Tc), hypsometric curve and integral (Hc and Hi) (Horton, 1932, Schumn, 1956, Strahler, 1957; Verstappen 1983; Keller and Pinter, 2002; Ozdemir and Bird, 2009). These morphometric parameters have generally been used to predict flood peaks, to assess sediment yield, and to estimate erosion rates in the basins. River basins of the Marmara Sea, has an area of approximately 40,000 sqkm, are the most important basins in Turkey based on their dense populations, industry and transportation systems. The primary aim of this study is to determine and analyse of morphometric characteristics of the Marmara Sea river basins using 10 m resolution Digital Elevation Model (DEM) and to evaluate of the results. For these purposes, digital 10 m contour maps scaled 1:25000 and geological maps scaled 1:100000 were used as the main data sources in the study. 10 m resolution DEM data were created using the contour maps and then drainage networks and their watersheds were extracted using D8 pour point model. Finally, linear, areal and relief morphometries were applied to the river basins using Geographic Information Systems (GIS). This study shows that morphometric analysis of the basins in regional level are very important to understand general morphological characteristics of the basins. In this case, tectonic and lithological conditions of the basins have greatly affected the morphometric characteristics of the north and south basins of the Marmara Sea. References Abrahams, AD. 1984. Channel Networks: A Geomorphological Perspective. Water Resources Research, Volume 20, Issue 2, pages 161-188. Horton, R.E. 1932. Drainage basin characteristics. Trans Am Geophys Union 13:350-361. Keller, E.A., Pinter, N. 2002. Active Tectonics Earthquakes, Uplift, and Landscape, Second Edition, Prentice Hall, New Jersey. Ozdemir H., Bird D. 2009. Evaluation of morphometric parameters of drainage networks derived from topographic maps and DEM in point of floods, Environmental Geology, vol.56, pp.1405-1415. Schumm, S.A. 1956. Evolution of drainage systems and slopes in badlands at Perth Amboy, New Jersey. Geol Soc Am Bull 67:597-646. Strahler, A.N. 1957. Quantitative geomorphology of drainage and channel networks. In: Chow YT (ed) Handbook of appliecl hydrology. Me Graw Hill Book Company, New York. Verstappen, H.Th. 1983. Applied geomorphology. ITC, Enschede.

Influence of peri-implant artifacts on bone morphometric analysis with micro-computed tomography.

PubMed

Song, Jin Wook; Cha, Jung Yul; Bechtold, Till Edward; Park, Young Chel

2013-01-01

To determine the optimal dilation pixel size distance from the mini-implant interface needed to compensate for the metal artifact on micro-computed tomography (micro-CT) for bone morphometric analysis. A total of 72 self-drilling mini-implants were placed into the buccal alveolar bone of six male beagle dogs. After 12 weeks of orthodontic loading, specimens were harvested and scanned with micro-CT (Skyscan 1076) at a resolution of 9 μm. Using the reload plug-in and dilation procedure of CTAn, the percentage of bone-implant contact (BIC) and bone volume density (BV/TV, bone volume/total volume), respectively, were measured from one to seven pixels from the metal implant surface. Each pixel size of dilation (PSD) were compared with that of a ground histologic section, and the optimal PSD for bone morphometric analysis using micro-CT was determined. BIC values from micro-CT analysis decreased when the PSD increased (P < .05). BIC from micro-CT showed the highest correlation coefficient with BIC from histologic slides when the PSD was 5 to 7 (P < .05), whereas BV/TV from micro-CT showed a very high correlation with BV/TV from histologic slides in all ranges (P < .0001). To measure BIC and BV/TV using micro-CT, at least 5 PSD from the metal implant surface is needed.

Quantitative diagnosis of bladder cancer by morphometric analysis of HE images

NASA Astrophysics Data System (ADS)

Wu, Binlin; Nebylitsa, Samantha V.; Mukherjee, Sushmita; Jain, Manu

2015-02-01

In clinical practice, histopathological analysis of biopsied tissue is the main method for bladder cancer diagnosis and prognosis. The diagnosis is performed by a pathologist based on the morphological features in the image of a hematoxylin and eosin (HE) stained tissue sample. This manuscript proposes algorithms to perform morphometric analysis on the HE images, quantify the features in the images, and discriminate bladder cancers with different grades, i.e. high grade and low grade. The nuclei are separated from the background and other types of cells such as red blood cells (RBCs) and immune cells using manual outlining, color deconvolution and image segmentation. A mask of nuclei is generated for each image for quantitative morphometric analysis. The features of the nuclei in the mask image including size, shape, orientation, and their spatial distributions are measured. To quantify local clustering and alignment of nuclei, we propose a 1-nearest-neighbor (1-NN) algorithm which measures nearest neighbor distance and nearest neighbor parallelism. The global distributions of the features are measured using statistics of the proposed parameters. A linear support vector machine (SVM) algorithm is used to classify the high grade and low grade bladder cancers. The results show using a particular group of nuclei such as large ones, and combining multiple parameters can achieve better discrimination. This study shows the proposed approach can potentially help expedite pathological diagnosis by triaging potentially suspicious biopsies.

Scaling mimesis: Morphometric and ecomorphological similarities in three sympatric plant-mimetic fish of the family Carangidae (Teleostei).

PubMed

Queiroz, Alexya Cunha de; Vallinoto, Marcelo; Sakai, Yoichi; Giarrizzo, Tommaso; Barros, Breno

2018-01-01

The mimetic juveniles of a number of carangid fish species resemble plant parts floating near the water surface, such as leaves, seeds and other plant debris. The present study is the first to verify the morphological similarities and ecomorphological relationships between three carangids (Oligoplites saurus, Oligoplites palometa and Trachinotus falcatus) and their associated plant models. Behavioral observations were conducted in the estuary of Curuçá River, in northeastern Pará (Brazil) between August 2015 and July 2016. Individual fishes and associated floating objects (models) were sampled for comparative analysis using both geometric and morphometric approaches. While the mimetic fish and their models retain their own distinct, intrinsic morphological features, a high degree of morphological similarity was found between each fish species and its model. The morphometric analyses revealed a general tendency of isometric development in all three fish species, probably related to their pelagic habitats, during all ontogenetic stages.

Morphological and morphometrical characterization of gametocytes of Hepatozoon procyonis Richards, 1961 (Protista, Apicomplexa) from a Brazilian wild procionid Nasua nasua and Procyon cancrivorus (Carnivora, Procyonidae).

PubMed

Soares Ferreira Rodrigues, André Flávio; Daemon, Erik; Massard, Carlos Luiz

2007-01-01

The species Hepatozoon procyonis Richards, 1961 was described in Procyon lotor in the USA and then in other reports in the USA, while in Panama H. procyonis has been described in Procyon cancrivorus. The objective of this paper is to report the occurrence of this species in the Brazilian procionids P. cancrivorus and Nasua nausa and to describe the morphology and morphometrics of the gametocytes. The analysis was based on blood smears, stained with Giemsa, which were examined under a photonic microscope. The morphometry was done with an ocular micrometer. It was based on the morphological characteristics and morphometric data on the gametocyte. It can be concluded that the species of the genus Hepatozoon that occurs in Brazilian procionids is the same as that occurring in procionids in Central and North America.

The spinning apparatus of webspinners – functional-morphology, morphometrics and spinning behaviour

PubMed Central

Büsse, Sebastian; Hörnschemeyer, Thomas; Hohu, Kyle; McMillan, David; Edgerly, Janice S.

2015-01-01

Webspinners (Insecta: Embioptera) have a distinctly unique behaviour with related morphological characteristics. Producing silk with the basitarsomeres of their forelegs plays a crucial role in the lives of these insects – providing shelter and protection. The correlation between body size, morphology and morphometrics of the spinning apparatus and the spinning behaviour of Embioptera was investigated for seven species using state-of-the-art methodology for behavioural as well as for morphological approaches. Independent contrast analysis revealed correlations between morphometric characters and body size. Larger webspinners in this study have glands with greater reservoir volume, but in proportionally smaller tarsi relative to body size than in the smaller species. Furthermore, we present a detailed description and review of the spinning apparatus in Embioptera in comparison to other arthropods and substantiate the possible homology of the embiopteran silk glands to class III dermal silk glands of insects. PMID:25950122

Recent advances in bird sperm morphometric analysis and its role in male gamete characterization and reproduction technologies

PubMed Central

Santiago-Moreno, Julian; Esteso, Milagros Cristina; Villaverde-Morcillo, Silvia; Toledano-Díaz, Adolfo; Castaño, Cristina; Velázquez, Rosario; López-Sebastián, Antonio; Goya, Agustín López; Martínez, Javier Gimeno

2016-01-01

Postcopulatory sexual selection through sperm competition may be an important evolutionary force affecting many reproductive traits, including sperm morphometrics. Environmental factors such as pollutants, pesticides, and climate change may affect different sperm traits, and thus reproduction, in sensitive bird species. Many sperm-handling processes used in assisted reproductive techniques may also affect the size of sperm cells. The accurately measured dimensions of sperm cell structures (especially the head) can thus be used as indicators of environmental influences, in improving our understanding of reproductive and evolutionary strategies, and for optimizing assisted reproductive techniques (e.g., sperm cryopreservation) for use with birds. Computer-assisted sperm morphometry analysis (CASA-Morph) provides an accurate and reliable method for assessing sperm morphometry, reducing the problem of subjectivity associated with human visual assessment. Computerized systems have been standardized for use with semen from different mammalian species. Avian spermatozoa, however, are filiform, limiting their analysis with such systems, which were developed to examine the approximately spherical heads of mammalian sperm cells. To help overcome this, the standardization of staining techniques to be used in computer-assessed light microscopical methods is a priority. The present review discusses these points and describes the sperm morphometric characteristics of several wild and domestic bird species. PMID:27678467

Morphometric analysis and neuroanatomical mapping of the zebrafish brain.

PubMed

Gupta, Tripti; Marquart, Gregory D; Horstick, Eric J; Tabor, Kathryn M; Pajevic, Sinisa; Burgess, Harold A

2018-06-21

Large-scale genomic studies have recently identified genetic variants causative for major neurodevelopmental disorders, such as intellectual disability and autism. However, determining how underlying developmental processes are affected by these mutations remains a significant challenge in the field. Zebrafish is an established model system in developmental neurogenetics that may be useful in uncovering the mechanisms of these mutations. Here we describe the use of voxel-intensity, deformation field, and volume-based morphometric techniques for the systematic and unbiased analysis of gene knock-down and environmental exposure-induced phenotypes in zebrafish. We first present a computational method for brain segmentation based on transgene expression patterns to create a comprehensive neuroanatomical map. This map allowed us to disclose statistically significant changes in brain microstructure and composition in neurodevelopmental models. We demonstrate the effectiveness of morphometric techniques in measuring changes in the relative size of neuroanatomical subdivisions in atoh7 morphant larvae and in identifying phenotypes in larvae treated with valproic acid, a chemical demonstrated to increase the risk of autism in humans. These tools enable rigorous evaluation of the effects of gene mutations and environmental exposures on neural development, providing an entry point for cellular and molecular analysis of basic developmental processes as well as neurodevelopmental and neurodegenerative disorders. Published by Elsevier Inc.

Shell shape variation of queen conch Strombus gigas (Mesograstropoda: Strombidae) from Southwest Caribbean.

PubMed

Márquez, Edna Judith; Restrepo-Escobar, Natalia; Montoya-Herrera, Francisco Luis

2016-12-01

The endangered species Strombus gigas is a marine gastropod of significant economic importance through the Greater Caribbean region. In contrast to phenotypic plasticity, the role of genetics on shell variations in S. gigas has not been addressed so far, despite its importance in evolution, management and conservation of this species. This work used geometric morphometrics to investigate the phenotypic variation of 219 shells of S. gigas from eight sites of the Colombian Southwest Caribbean. Differences in mean size between sexes and among sites were contrasted by analysis of variance. Allometry was tested by multivariate regression and the hypothesis of common slope was contrasted by covariance multivariate analysis. Differences in the shell shape among sites were analyzed by principal component analysis. Sexual size dimorphism was not significant, whereas sexual shape dimorphism was significant and variable across sites. Differences in the shell shape among sites were concordant with genetic differences based on microsatellite data, supporting its genetic background. Besides, differences in the shell shape between populations genetically similar suggest a role of phenotypic plasticity in the morphometric variation of the shell shape. These outcomes evidence the role of genetic background and phenotypic plasticity in the shell shape of S. gigas. Thus, geometric morphometrics of shell shape may constitute a complementary tool to explore the genetic diversity of this species.

Discrimination of snipefish Macroramphosus species and boarfish Capros aper morphotypes through multivariate analysis of body shape

NASA Astrophysics Data System (ADS)

Lopes, Marta; Murta, Alberto G.; Cabral, Henrique N.

2006-03-01

The existence of two species of the genus Macroramphosus Lacepède 1803, has been discussed based on morphometric characters, diet composition and depth distribution. Another species, the boarfish Capros aper (Linnaeus 1758), caugth along the Portuguese coast, shows two different morphotypes, one type with smaller eyes and a deeper body than the other, occurring with intermediate forms. In both snipefish and boarfish no sexual dimorphism was found with respect to shape and length relationships. However, females in both genera were on average bigger than males. A multidimensional scaling analysis was performed using Procrustes distances, in order to check if shape geometry was effective in distinguishing the species of snipefish as well as the morphotypes of boarfish. A multivariate discriminant analysis using morphometric characters of snipefish and boarfish was carried out to validate the visual criteria for a distinction of species and morphotypes, respectively. Morphometric characters revealed a great discriminatory power to distinguish morphotypes. Both snipefish and boarfish are very abundant in Portuguese waters, showing two well-defined morphologies and intermediate forms. This study suggests that there may be two different species in each genus and that further studies on these fish should be carried out to investigate if there is reproductive isolation between the morphotypes of boarfish and to validate the species of snipefish.

Quantitative analysis of the renal aging in rats. Stereological study.

PubMed

Melchioretto, Eduardo Felippe; Zeni, Marcelo; Veronez, Djanira Aparecida da Luz; Martins, Eduardo Lopes; Fraga, Rogério de

2016-05-01

To evaluate the renal function and the renal histological alterations through the stereology and morphometrics in rats submitted to the natural process of aging. Seventy two Wistar rats, divided in six groups. Each group was sacrificed in a different age: 3, 6, 9, 12, 18 and 24 months. It was performed right nephrectomy, stereological and morphometric analysis of the renal tissue (renal volume and weight, density of volume (Vv[glom]) and numerical density (Nv[glom]) of the renal glomeruli and average glomerular volume (Vol[glom])) and also it was evaluated the renal function for the dosage of serum creatinine and urea. There was significant decrease of the renal function in the oldest rats. The renal volume presented gradual increase during the development of the rats with the biggest values registered in the group of animals at 12 months of age and significant progressive decrease in older animals. Vv[glom] presented statistically significant gradual reduction between the groups and the Nv[glom] also decreased significantly. The renal function proved to be inferior in senile rats when compared to the young rats. The morphometric and stereological analysis evidenced renal atrophy, gradual reduction of the volume density and numerical density of the renal glomeruli associated to the aging process.

Bottom head assembly

DOEpatents

Fife, A.B.

1998-09-01

A bottom head dome assembly is described which includes, in one embodiment, a bottom head dome and a liner configured to be positioned proximate the bottom head dome. The bottom head dome has a plurality of openings extending there through. The liner also has a plurality of openings extending there through, and each liner opening aligns with a respective bottom head dome opening. A seal is formed, such as by welding, between the liner and the bottom head dome to resist entry of water between the liner and the bottom head dome at the edge of the liner. In the one embodiment, a plurality of stub tubes are secured to the liner. Each stub tube has a bore extending there through, and each stub tube bore is coaxially aligned with a respective liner opening. A seat portion is formed by each liner opening for receiving a portion of the respective stub tube. The assembly also includes a plurality of support shims positioned between the bottom head dome and the liner for supporting the liner. In one embodiment, each support shim includes a support stub having a bore there through, and each support stub bore aligns with a respective bottom head dome opening. 2 figs.

Assessment of the Extent of Land Deformation Associated with Salt Domes within the Jazan City and Surroundings, Saudi Arabia

NASA Astrophysics Data System (ADS)

Pankratz, H. G.; Sultan, M.; Fathy, K.; AlMogren, S. M.; Harbi, H.; Sefry, S.; Emil, M.; Elkadiri, R.; Ahmed, M.; Othman, A.; Chouinard, K.

2016-12-01

The Jazan city in the Jazan Province of the Kingdom of Saudi Arabia is a vibrant and rapidly growing economic center and port. The old city of Jazan is centered over a salt dome (diaper) that crops out over an area, 3-4 km wide and 20 to 40 m above surroundings. The intrusion of the diaper into the overlying cap rock causes uneven surfaces, compromises building foundations, and causes infrastructural problems. Our study is aimed at the assessment of the salt dome-related land deformation. Using observations acquired over known locations of salt domes in Jazan and neighboring Farsan Islands, we identified criteria by which previously unidentified, near-surface salt domes, could be mapped. The selected criteria and/or applied methodologies included: (1) deformation over potential salt dome locations detected from Envisat, ERS-2, and Sentinel-1 scenes using the Stanford Method for Persistent Scatterers [StaMPs] and SARscape software. Uplift rates of about 3 mm/yr were observed over the salt dome outcrop in Jazan with increasing rates towards the center, indicating continuous rise of the salt diaper. (2) Local elevation highs over potential, near surface, salt dome intrusions observed in high spatial resolution (12.5 m), PALSAR digital elevation model (DEM). The elevation the Jazan dome is 45m high, whereas its surroundings are 15-30m high. (3) Negative Bouguer gravity anomalies over potential salt dome locations (Bouguer maps generated from 714 m interval airborne gravity data). Negative Bouguer anomalies were observed over the salt domes in Jazan (-3 mGal) and in Farsan (-30 mGal). (4) Boundaries of the potential salt domes extracted from zero tilt contour values on tilt derivative maps. (5) Shallow (< 2km) modeled depth to identified potential salt dome locations (software: Grav2dc 2-D modeling software). Zero contour values and 2-D modeling was used to identify the location and depth of the source anomaly (depth: Jazan = 0 m). (6) Spatial correlation (in a GIS platform) of observations extracted from remote sensing, geophysical, GPS, and DEM datasets (items 1 through 5). Eight previously unidentified locations of potential near-surface salt domes were identified along the Red Sea coastline within the scene extent, five of which were north of the salt dome outcrop and three to the south.

Horabagrus melanosoma: a junior synonym of Horabagrus brachysoma (Teleostei: Horabagridae).

PubMed

Ali, Anvar; Katwate, Unmesh; Philip, Siby; Dhaneesh, K V; Bijukumar, A; Raghavan, Rajeev; Dahanukar, Neelesh

2014-11-06

Horabagrus melanosoma was described from West Venpala in the lower reaches of the Manimala River, in the state of Kerala, India. It was distinguished from its nearest congener, H. brachysoma based on a combination of characters including darker body colour, shorter pelvic fin and greater number of anal fin rays. Examination of the type material revealed significant morphometric and meristic discrepancies with the original description. Based on multivariate morphometric, and genetic analysis of topotypical specimens, we propose that H. melanosoma should be treated as a junior synonym of H. brachysoma.

Fracture patterns of glass-ionomer cement overlays versus stainless steel bands during endodontic treatment: an ex-vivo study.

PubMed

Pakdeethai, S; Abuzar, M; Parashos, P

2013-12-01

To compare fracture patterns of posterior teeth temporized with: mesio-occlusal-distal (MOD) glass-ionomer cement (GIC) interim restorations, stainless steel (SS) bands, GIC dome overlays and GIC dome overlays with occlusal temporary restorations. The root canals of 92 extracted human premolars and molars were prepared with rotary NiTi instruments and dressed with calcium hydroxide paste prior to cavity preparation for standardized MOD restorations. Teeth were divided into four groups (n = 23) and temporarily restored with: GIC interim restorations (GIC group), stainless steel bands (SS group), GIC dome overlays (GIC-O group) or GIC dome overlays with intermediate restorative material (IRM) in the access cavities (GIC-IRM group). Teeth were subjected to compressive axial load until fracture; fracture forces and fracture modes were recorded. Statistical analysis included Kaplan-Meier plots, Cox proportional hazards model, one-way analysis of variance, chi-square and Fisher's exact tests. There was a significantly higher risk of failure in the GIC group compared with the SS (P < 0.001), GIC-O (P < 0.001) and GIC-IRM (P = 0.001) groups. The mean fracture force for SS was significantly higher than GIC-O (P = 0.03) and GIC-IRM (P < 0.001). GIC fracture force was significantly lower than all other groups (P < 0.001). Significantly fewer unfavourable fractures were observed in SS compared with GIC (P = 0.001), GIC-O (P = 0.007) and GIC-IRM (P < 0.001). Glass-ionomer cement dome overlays with reduced cuspal height and occlusal inclines may be recommended for broken-down posterior teeth, without any risk of poor aesthetics, gingival irritation or further proximal tooth structure loss. Stainless steel bands may only need to be used in extensively broken-down teeth or in the presence of parafunctional habits. © 2013 International Endodontic Journal. Published by John Wiley & Sons Ltd.

Longitudinal biases in the Seychelles Dome simulated by 35 ocean-atmosphere coupled general circulation models

NASA Astrophysics Data System (ADS)

Nagura, Motoki; Sasaki, Wataru; Tozuka, Tomoki; Luo, Jing-Jia; Behera, Swadhin K.; Yamagata, Toshio

2013-02-01

Seychelles Dome refers to the shallow climatological thermocline in the southwestern Indian Ocean, where ocean wave dynamics efficiently affect sea surface temperature, allowing sea surface temperature anomalies to be predicted up to 1-2 years in advance. Accurate reproduction of the dome by ocean-atmosphere coupled general circulation models (CGCMs) is essential for successful seasonal predictions in the Indian Ocean. This study examines the Seychelles Dome as simulated by 35 CGCMs, including models used in phase five of the Coupled Model Intercomparison Project (CMIP5). Among the 35 CGCMs, 14 models erroneously produce an upwelling dome in the eastern half of the basin whereas the observed Seychelles Dome is located in the southwestern tropical Indian Ocean. The annual mean Ekman pumping velocity in these models is found to be almost zero in the southern off-equatorial region. This result is inconsistent with observations, in which Ekman upwelling acts as the main cause of the Seychelles Dome. In the models reproducing an eastward-displaced dome, easterly biases are prominent along the equator in boreal summer and fall, which result in shallow thermocline biases along the Java and Sumatra coasts via Kelvin wave dynamics and a spurious upwelling dome in the region. Compared to the CMIP3 models, the CMIP5 models are even worse in simulating the dome longitudes.

Pressure Dome for High-Pressure Electrolyzer

NASA Technical Reports Server (NTRS)

Norman, Timothy; Schmitt, Edwin

2012-01-01

A high-strength, low-weight pressure vessel dome was designed specifically to house a high-pressure [2,000 psi (approx. = 13.8 MPa)] electrolyzer. In operation, the dome is filled with an inert gas pressurized to roughly 100 psi (approx. = 690 kPa) above the high, balanced pressure product oxygen and hydrogen gas streams. The inert gas acts to reduce the clamping load on electrolyzer stack tie bolts since the dome pressure acting axially inward helps offset the outward axial forces from the stack gas pressure. Likewise, radial and circumferential stresses on electrolyzer frames are minimized. Because the dome is operated at a higher pressure than the electrolyzer product gas, any external electrolyzer leak prevents oxygen or hydrogen from leaking into the dome. Instead the affected stack gas stream pressure rises detectably, thereby enabling a system shutdown. All electrical and fluid connections to the stack are made inside the pressure dome and require special plumbing and electrical dome interfaces for this to be accomplished. Further benefits of the dome are that it can act as a containment shield in the unlikely event of a catastrophic failure. Studies indicate that, for a given active area (and hence, cell ID), frame outside diameter must become ever larger to support stresses at higher operating pressures. This can lead to a large footprint and increased costs associated with thicker and/or larger diameter end-plates, tie-rods, and the frames themselves. One solution is to employ rings that fit snugly around the frame. This complicates stack assembly and is sometimes difficult to achieve in practice, as its success is strongly dependent on frame and ring tolerances, gas pressure, and operating temperature. A pressure dome permits an otherwise low-pressure stack to operate at higher pressures without growing the electrolyzer hardware. The pressure dome consists of two machined segments. An O-ring is placed in an O-ring groove in the flange of the bottom segment and is trapped by the flange on the top dome segment when these components are bolted together with high-strength bolts. The pressure dome has several unique features. It is made (to ASME Pressure Vessel guidelines) in a high-strength aluminum alloy with the strength of stainless steel and the weight benefits of aluminum. The flange of the upper dome portion contains specially machined flats for mounting the dome, and other flats dedicated to the special feedthroughs for electrical connections. A pressure dome can be increased in length to house larger stacks (more cells) of the same diameter with the simple addition of a cylindrical segment. To aid in dome assembly, two stainless steel rings are employed. One is used beneath the heads of the high-strength bolts in lieu of individual hardened washers, and another is used instead of individual nuts. Like electrolyzers could be operated at low or high pressures simply by operating the electrolyzer outside or inside a pressurized dome.

Analysis Methodologies and Ameliorative Techniques for Mitigation of the Risk in Churches with Drum Domes

DOE Office of Scientific and Technical Information (OSTI.GOV)

Zingone, Gaetano; Licata, Vincenzo; Calogero, Cucchiara

2008-07-08

The present work fits into the interesting theme of seismic prevention for protection of the monumental patrimony made up of churches with drum domes. Specifically, with respect to a church in the historic area of Catania, chosen as a monument exemplifying the typology examined, the seismic behavior is analyzed in the linear field using modern dynamic identification techniques. The dynamically identified computational model arrived at made it possible to identify the macro-element most at risk, the dome-drum system. With respect to this system the behavior in the nonlinear field is analyzed through dynamic tests on large-scale models in the presencemore » of various types of improving reinforcement. The results are used to appraise the ameliorative contribution afforded by each of them and to choose the most suitable type of reinforcement, optimizing the stiffness/ductility ratio of the system.« less

Preliminary access routes and cost study analyses for seven potentially acceptable salt sites: Final report, October 1984

DOE Office of Scientific and Technical Information (OSTI.GOV)

Not Available

1987-02-01

This report analyzes highway and railroad access to seven potentially acceptable salt repository sites: Richton Dome and Cypress Creek Dome in Mississippi, Vacherie Dome in Louisiana, Swisher County and Deaf Smith County in Texas, and Davis Canyon and Lavender Canyon in utah. The objectives of the study were to investigate the routing of reasonable access corridors to the sites, describe major characteristics of each route, and estimate the costs for constructing or upgrading highways and railroads. The routes used in the analysis are not necessarily recommended or preferred over other routes, nor do they represent an implied final selection. Detailedmore » engineering studies must be performed for the Davis Canyon and Lavender Canyon highway access before the analyzed routes can be considered to be viable. 20 refs., 7 figs., 3 tabs.« less

Volcano dome dynamics at Mount St. Helens: Deformation and intermittent subsidence monitored by seismicity and camera imagery pixel offsets

USGS Publications Warehouse

Salzer, Jacqueline T.; Thelen, Weston A.; James, Mike R.; Walter, Thomas R.; Moran, Seth C.; Denlinger, Roger P.

2016-01-01

The surface deformation field measured at volcanic domes provides insights into the effects of magmatic processes, gravity- and gas-driven processes, and the development and distribution of internal dome structures. Here we study short-term dome deformation associated with earthquakes at Mount St. Helens, recorded by a permanent optical camera and seismic monitoring network. We use Digital Image Correlation (DIC) to compute the displacement field between successive images and compare the results to the occurrence and characteristics of seismic events during a 6 week period of dome growth in 2006. The results reveal that dome growth at Mount St. Helens was repeatedly interrupted by short-term meter-scale downward displacements at the dome surface, which were associated in time with low-frequency, large-magnitude seismic events followed by a tremor-like signal. The tremor was only recorded by the seismic stations closest to the dome. We find a correlation between the magnitudes of the camera-derived displacements and the spectral amplitudes of the associated tremor. We use the DIC results from two cameras and a high-resolution topographic model to derive full 3-D displacement maps, which reveals internal dome structures and the effect of the seismic activity on daily surface velocities. We postulate that the tremor is recording the gravity-driven response of the upper dome due to mechanical collapse or depressurization and fault-controlled slumping. Our results highlight the different scales and structural expressions during growth and disintegration of lava domes and the relationships between seismic and deformation signals.

Early Miocene rapid exhumation in southern Tibet: Insights from P-T-t-D-magmatism path of Yardoi dome

NASA Astrophysics Data System (ADS)

Wang, Jia-Min; Wu, Fu-Yuan; Rubatto, Daniela; Liu, Kai; Zhang, Jin-Jiang; Liu, Xiao-Chi

2018-04-01

Reconstructing the evolution of Gneiss domes within orogenic belts poses challenges because domes can form in a variety of geodynamic settings and by multiple doming mechanisms. For the North Himalayan gneiss domes (NHGD), it is debated whether they formed during shortening, extension or collapse of the plateau, and what is the spatial and temporal relationship of magmatism, metamorphism and deformation. This study investigates the Yardoi dome in southern Tibet using field mapping, petrography, phase equilibria modelling and new monazite ages. The resulting P-T-time-deformation-magmatism path for the first time reveals the spatial and temporal relationship of metamorphism, deformation and magmatism in the Yardoi dome: a) the dome mantle recorded prograde loading to kyanite-grade Barrovian metamorphic conditions of 650 ± 30 °C and 9 ± 1 kbar (M2) in the Early Miocene (18-17 Ma); b) the main top-to-the-north deformation fabric (D2) formed syn- to post-peak-metamorphism; c) the emplacement of leucorgranites related to doming is syn-metamorphism at 19-17 Ma. The link between the detachment shear zone in the Yardoi dome and the South Tibetan detachment system (STDS) is confirmed. By comparing with orogen-scale tectonic processes in the Himalaya, we suggest that north-south extension in a convergent geodynamic setting during Early Miocene accounts for formation of the Yardoi dome. In a wider tectonic context, the Early Miocene rapid exhumation of deep crustal rocks was contemporaneous with the rapid uplift of southern Tibet and the Himalayan orogen.

Dome Schools.

ERIC Educational Resources Information Center

Cirulli, Carol

1999-01-01

Back in 1988, Emmett, Idaho, built the first monolithic dome school. Now, school boards in Arizona, Missouri, Florida, Minnesota, and New Mexico are among those that have voted to build domed school buildings. A monolithic dome is a steel- reinforced, concrete structure with a smooth, round surface that is inspired by the shape of an egg. (MLF)

Craniofacial morphometric analysis of mandibular prognathism.

PubMed

Chang, H P; Liu, P H; Yang, Y H; Lin, H C; Chang, C H

2006-03-01

The purpose of this study was to provide more information about the morphological characteristics of the craniofacial complex in mandibular prognathism. Forty young adult males having mandibular prognathism were compared with 40 having normal occlusion. This was conducted to carry out geometric morphometric assessments to localize alterations, using Procrustes analysis and thin-plate spline analysis, in addition to conventional cephalometric techniques. Procrustes analysis indicated that the mean craniofacial, midfacial and mandibular morphology was significantly different in prognathic subjects compared with normal controls. This finding was corroborated by the multivariate Hotelling T(2)-test of cephalometric variables. Mandibular prognathism demonstrated a shorter and slightly retropositioned maxilla, a greater total length and anterior positioning of the mandible. Thin-plate spline analysis revealed a developmental diminution of the palatomaxillary region anteroposteriorly and a developmental elongation of the mandible anteroposteriorly, leading to the appearance of a prognathic mandibular profile. In conclusion, thin-plate spline analysis seems to provide a valuable supplement for conventional cephalometric analysis because the complex patterns of craniofacial shape change are visualized suggestive by means of grid deformations.

A web system of virtual morphometric globes for Mars and the Moon

NASA Astrophysics Data System (ADS)

Florinsky, I. V.; Garov, A. S.; Karachevtseva, I. P.

2018-09-01

We developed a web system of virtual morphometric globes for Mars and the Moon. As the initial data, we used 15-arc-minutes gridded global digital elevation models (DEMs) extracted from the Mars Orbiter Laser Altimeter (MOLA) and the Lunar Orbiter Laser Altimeter (LOLA) gridded archives. We derived global digital models of sixteen morphometric variables including horizontal, vertical, minimal, and maximal curvatures, as well as catchment area and topographic index. The morphometric models were integrated into the web system developed as a distributed application consisting of a client front-end and a server back-end. The following main functions are implemented in the system: (1) selection of a morphometric variable; (2) two-dimensional visualization of a calculated global morphometric model; (3) 3D visualization of a calculated global morphometric model on the sphere surface; (4) change of a globe scale; and (5) globe rotation by an arbitrary angle. Free, real-time web access to the system is provided. The web system of virtual morphometric globes can be used for geological and geomorphological studies of Mars and the Moon at the global, continental, and regional scales.

A Retrospective 2D Morphometric Analysis of Adult Female Chiari Type I Patients with Commonly Reported and Related Conditions

PubMed Central

Eppelheimer, Maggie S.; Houston, James R.; Bapuraj, Jayapalli R.; Labuda, Richard; Loth, Dorothy M.; Braun, Audrey M.; Allen, Natalie J.; Heidari Pahlavian, Soroush; Biswas, Dipankar; Urbizu, Aintzane; Martin, Bryn A.; Maher, Cormac O.; Allen, Philip A.; Loth, Francis

2018-01-01

Purpose: Researchers have sought to better understand Chiari type I malformation (CMI) through morphometric measurements beyond tonsillar position (TP). Soft tissue and bone structures within the brain and craniocervical junction have been shown to be different for CMI patients compared to healthy controls. Yet, several morphological characteristics have not been consistently associated with CMI. CMI is also associated with different prevalent conditions (PCs) such as syringomyelia, pseudotumor, Ehlers-Danlos syndrome (EDS), scoliosis, and craniocervical instability. The goal of this study was two-fold: (1) to identify unique morphological characteristics of PCs, and (2) to better explain inconsistent results from case-control comparisons of CMI. Methods: Image, demographic, and PC information was obtained through the Chiari1000, a self-report web-accessed database. Twenty-eight morphometric measurements (MMs) were performed on the cranial MR images of 236 pre-surgery adult female CMI participants and 140 female healthy control participants. Custom software was used to measure 28 structures within the posterior cranial fossa (PCF) compartment, craniocervical junction, oral cavity, and intracranial area on midsagittal MR images for each participant. Results: Morphometric analysis of adult females indicated a smaller McRae line length in CMI participants with syringomyelia compared to those without syringomyelia. TP was reduced in CMI participants with EDS than those without EDS. Basion to posterior axial line was significantly longer in CMI participants with scoliosis compared to those without scoliosis. No additional MMs were found to differ between CMI participants with and without a specific PC. Four morphometric differences were found to be consistently different between CMI participants and healthy controls regardless of PC: larger TP and a smaller clivus length, fastigium, and corpus callosum height in CMI participants. Conclusion: Syringomyelia, EDS, and scoliosis were the only PCs that showed significant morphometric differences between CMI participants. Additionally, four midsagittal MR-based MMs were found to be significantly different between healthy controls and CMI participants regardless of the presence of one or more PCs. This study suggests that the prevalence of comorbid conditions are not strongly related to CMI morphology, and that inconsistent findings in the radiographic literature cannot be explained by varying prevalence of comorbid conditions in CMI study samples. PMID:29403363

Stream network analysis and geomorphic flood plain mapping from orbital and suborbital remote sensing imagery application to flood hazard studies in central Texas

NASA Technical Reports Server (NTRS)

Baker, V. R. (Principal Investigator); Holz, R. K.; Hulke, S. D.; Patton, P. C.; Penteado, M. M.

1975-01-01

The author has identified the following significant results. Development of a quantitative hydrogeomorphic approach to flood hazard evaluation was hindered by (1) problems of resolution and definition of the morphometric parameters which have hydrologic significance, and (2) mechanical difficulties in creating the necessary volume of data for meaningful analysis. Measures of network resolution such as drainage density and basin Shreve magnitude indicated that large scale topographic maps offered greater resolution than small scale suborbital imagery and orbital imagery. The disparity in network resolution capabilities between orbital and suborbital imagery formats depends on factors such as rock type, vegetation, and land use. The problem of morphometric data analysis was approached by developing a computer-assisted method for network analysis. The system allows rapid identification of network properties which can then be related to measures of flood response.

The potential of statistical shape modelling for geometric morphometric analysis of human teeth in archaeological research

PubMed Central

Fernee, Christianne; Browne, Martin; Zakrzewski, Sonia

2017-01-01

This paper introduces statistical shape modelling (SSM) for use in osteoarchaeology research. SSM is a full field, multi-material analytical technique, and is presented as a supplementary geometric morphometric (GM) tool. Lower mandibular canines from two archaeological populations and one modern population were sampled, digitised using micro-CT, aligned, registered to a baseline and statistically modelled using principal component analysis (PCA). Sample material properties were incorporated as a binary enamel/dentin parameter. Results were assessed qualitatively and quantitatively using anatomical landmarks. Finally, the technique’s application was demonstrated for inter-sample comparison through analysis of the principal component (PC) weights. It was found that SSM could provide high detail qualitative and quantitative insight with respect to archaeological inter- and intra-sample variability. This technique has value for archaeological, biomechanical and forensic applications including identification, finite element analysis (FEA) and reconstruction from partial datasets. PMID:29216199

Debris avalanches and slumps on the margins of volcanic domes on Venus: Characteristics of deposits

NASA Technical Reports Server (NTRS)

Bulmer, M. H.; Guest, J. E.; Beretan, K.; Michaels, Gregory A.; Saunders, R. Stephen

1992-01-01

Modified volcanic domes, referred to as collapsed margin domes, have diameters greater than those of terrestrial domes and were therefore thought to have no suitable terrestrial analogue. Comparison of the collapsed debris using the Magellan SAR images with volcanic debris avalanches on Earth has revealed morphological similarities. Some volcanic features identified on the seafloor from sonar images have diameters similar to those on Venus and also display scalloped margins, indicating modification by collapse. Examination of the SAR images of collapsed dome features reveals a number of distinct morphologies to the collapsed masses. Ten examples of collapsed margin domes displaying a range of differing morphologies and collapsed masses have been selected and examined.

Thermal influences on spontaneous rock dome exfoliation

USGS Publications Warehouse

Collins, Brian D.; Stock, Greg M.; Eppes, Martha C.; Lewis, Scott W.; Corbett, Skye C.; Smith, Joel B.

2018-01-01

Rock domes, with their onion-skin layers of exfoliation sheets, are among the most captivating landforms on Earth. Long recognized as integral in shaping domes, the exact mechanism(s) by which exfoliation occurs remains enigmatic, mainly due to the lack of direct observations of natural events. In August 2014, during the hottest days of summer, a granitic dome in California, USA, spontaneously exfoliated; witnesses observed extensive cracking, including a ~8000 kg sheet popping into the air. Subsequent exfoliation episodes during the following two summers were recorded by instrumentation that captured—for the first time—exfoliation deformation and stress conditions. Here we show that thermal cycling and cumulative dome surface heating can induce subcritical cracking that culminates in seemingly spontaneous exfoliation. Our results indicate that thermal stresses—largely discounted in dome formation literature—can play a key role in triggering exfoliation and therefore may be an important control for shaping domes worldwide.

Electrical resistivity tomography applied to a complex lava dome: 2D and 3D models comparison

NASA Astrophysics Data System (ADS)

Portal, Angélie; Fargier, Yannick; Lénat, Jean-François; Labazuy, Philippe

2015-04-01

The study of volcanic domes growth (e.g. St. Helens, Unzen, Montserrat) shows that it is often characterized by a succession of extrusion phases, dome explosions and collapse events. Lava dome eruptive activity may last from days to decades. Therefore, their internal structure, at the end of the eruption, is complex and includes massive extrusions and lava lobes, talus and pyroclastic deposits as well as hydrothermal alteration. The electrical resistivity tomography (ERT) method, initially developed for environmental and engineering exploration, is now commonly used for volcano structure imaging. Because a large range of resistivity values is often observed in volcanic environments, the method is well suited to study the internal structure of volcanic edifices. We performed an ERT survey on an 11ka years old trachytic lava dome, the Puy de Dôme volcano (French Massif Central). The analysis of a recent high resolution DEM (LiDAR 0.5 m), as well as other geophysical data, strongly suggest that the Puy de Dôme is a composite dome. 11 ERT profiles have been carried out, both at the scale of the entire dome (base diameter of ~2 km and height of 400 m) on the one hand, and at a smaller scale on the summit part on the other hand. Each profile is composed of 64 electrodes. Three different electrode spacing have been used depending on the study area (35 m for the entire dome, 10 m and 5 m for its summit part). Some profiles were performed with half-length roll-along acquisitions, in order to keep a good trade-off between depth of investigation and resolution. Both Wenner-alpha and Wenner-Schlumberger protocols were used. 2-D models of the electrical resistivity distribution were computed using RES2DINV software. In order to constrain inversion models interpretation, the depth of investigation (DOI) method was applied to those results. It aims to compute a sensitivity index on inversion results, illustrating how the data influence the model and constraining models interpretation. Geometry and location of ERT profiles on the Puy de Dôme volcano allow to compute 3D inversion models of the electrical resistivity distribution with a new inversion code. This code uses tetrahedrons to discretize the 3D model and uses also a conventional Gauss-Newton inversion scheme combined to an Occam regularisation to process the data. It allows to take into account all the data information and prevents the construction of 3D artefacts present in conventional 2D inversion results. Inversion results show a strong electrical resistivity heterogeneity of the entire dome. Underlying volcanic edifices are clearly identified below the lava dome. Generally speaking, the flanks of the volcano show high resistivity values, and the summit part is more conductive but also very heterogeneous.

The tectono-thermal evolution of the Waterbury dome, western Connecticut, based on U-Pb and 40Ar/39Ar ages

USGS Publications Warehouse

Dietsch, Craig; Kunk, Michael J.; Aleinikoff, John; Sutter, John F.

2010-01-01

Level 3 nappes were emplaced over the Waterbury dome along an Acadian décollement synchronous with the formation of a D3 thrust duplex in the dome. The décollement truncates the Ky + Kfs-in (migmatite) isograd in the dome core and a St-in isograd in level 3 nappes, indicating that peak metamorphic conditions in the dome core and nappe cover rocks formed in different places at different times. Metamorphic overgrowths on zircon from the felsic orthogneiss in the Waterbury dome have an age of 387 ± 5 Ma. Rocks of all levels and the décollement are folded by D4 folds that have a strongly developed, regional crenulation cleavage and D5 folds. The Waterbury dome was formed by thrust duplexing followed by fold interference during the Acadian orogeny. The 40Ar/39Ar ages of amphibole, muscovite, biotite, and K-feldspar from above and below the décollement are ca. 378 Ma, 355 Ma, 360 Ma (above) and 340 (below), and 288 Ma, respectively. Any kilometer-scale vertical movements between dome and nappe rocks were over by ca. 378 Ma. Core and cover rocks of the Waterbury dome record synchronous, post-Acadian cooling.

Environmental assessment: Richton Dome Site, Mississippi

DOE Office of Scientific and Technical Information (OSTI.GOV)

none,

1986-05-01

In February 1983, the US Department of Energy (DOE) identified the Richton Dome site in Mississippi as one of the nine potentially acceptable sites for a mined geologic repository for spent nuclear fuel and high-level radioactive waste. To determine their suitability, the Richton Dome site and the eight other potentially acceptable sites have been evaluated in accordance with the DOE's General Guidelines for the Recommendation of Sites for the Nuclear Waste Repositories. These evaluations were reported in draft environmental assessments (EAs), which were issued for public review and comment. After considering the comments received on the draft EAs, the DOEmore » prepared the final EAs. The site is in the Gulf interior region, which is one of five distinct geohydrologic settings considered for the first repository. This setting contains two other potentially acceptable sites--the Cypress Creek Dome site in Mississippi and the Vacherie Dome site in Louisiana. Although the Cypress Creek Dome and the Vacherie Dome sites are suitable for site characterization, the DOE has concluded that the Richton Dome site is the preferred site in the Gulf interior region. On the basis of the evaluations reported in this EA, the DOE has found that the Richton Dome site is not disqualified under the guidelines.« less

Precocious development of lectin (Ulex europaeus agglutinin I) receptors in dome epithelium of gut-associated lymphoid tissues.

PubMed

Roy, M J

1987-06-01

Dome epithelium (DE), the tissue covering lymphoid domes of gut-associated lymphoid tissues, was examined in both adult and neonatal rabbit appendix or sacculus rotundus to determine if dome epithelial cells matured earlier than epithelial cells covering adjacent villi. The localization of well-differentiated epithelial cells in rabbit gut-associated lymphoid tissues (GALT) was accomplished histochemically by use of molecular probes: fluorescein isothiocyanate or horseradish peroxidase conjugates of Ulex europaeus agglutinin I (UEA), a lectin specific for terminal L-fucose molecules on certain glycoconjugates. The villus epithelial cells of newborn and 2-, 5-, or 10-day-old rabbits did not bind UEA, but between the twelfth and fifteenth days of postnatal life, UEA receptors were expressed by well-differentiated villus epithelial cells. In contrast to villus epithelium, DE in appendix and sacculus rotundus of neonatal rabbits expressed UEA receptors two days after birth, a feature that distinguished the DE of neonatal GALT for the next two weeks. In adult rabbits, UEA receptors were associated with dome epithelial cells extending from the mouths of glandular crypts to the upper domes; in contrast to the domes, UEA receptors were only present on well-differentiated epithelial cells at the villus tips. Results suggested that in neonatal rabbits most dome epithelial cells developed UEA receptors shortly after birth, reflecting precocious development of DE as compared to villus epithelium. In adult rabbit dome epithelium UEA receptors appeared on dome epithelial cells as they left the glandular crypts, representing accelerated epithelial maturation.

Dome growth and destruction during the 1989-1990 eruption of redoubt volcano

USGS Publications Warehouse

Miller, T.P.

1994-01-01

Much of the six-month-long 1989-1990 eruption of Redoubt Volcano consisted of a dome-growth and -destructive phase in which 14 short-lived viscous silicic andesite domes were emplaced and 13 subsequently destroyed. The life span of an individual dome ranged from 3 to 21 days and volumes are estimated at 1 ?? 106 to 30 ?? 106 m3. Magma supply rates to the vent area averaged about 5 ?? 105 m3 / day for most of the dome-building phase and ranged from a high of 2.2 ?? 106 m3 per day initially to a low of 1.8 ?? 105 m3 per day at the waning stages of the eruption. The total volume of all domes is estimated to be about 90 ?? 106 m3 and may represent as much as 60-70% of the volume for the entire eruption. The site of 1989-1990 dome emplacement, like that in 1966, was on the margin of a north-facing amphitheatre-like summit crater. The domes were confined on the east and west by steep cliffs of pre-eruption cone-building volcanic rocks and thus were constrained to grow vertically. Rapid upward growth in a precarious site caused each dome to spread preferentially to the north, resulting in eventual gravitational collapse. As long as the present conduit remains active at Redoubt Volcano, any dome formed in a new eruption will be confined to a narrow steeply-sloping gorge, leading to rapid vertical growth and a tendency to collapse gravitationally. Repetitive cycles of dome formation and failure similar to those seen in 1989-1990 are probably the norm and must be considered in future hazard analyses of Redoubt Volcano. ?? 1994.

Transdomes: Emplacement of Migmatite Domes in Oblique Tectonic Settings

NASA Astrophysics Data System (ADS)

Teyssier, C. P.; Rey, P. F.; Whitney, D. L.; Mondy, L. S.; Roger, F.

2014-12-01

Many migmatite domes are emplaced within wrench corridors in which a combination of strike-slip and extensional detachment zones (pull-apart, extensional relay, or transfer zones) focus deep-crust exhumation. The Montagne Noire dome (France, Variscan Massif Central) exemplifies wrench-related dome formation and displays the following structural, metamorphic, and geochronologic characteristics of a 'transdome': the dome is elongate in the direction of extension; foliation outlines a double dome separated by a high-strain zone; lineation is shallowly plunging with a fairly uniform trend that parallels the strike of the high-strain zone; subdomes contain recumbent structures overprinted by upright folds that affected upward by flat shear zones associated with detachment tectonics; domes display a large syn-deformation metamorphic gradient from core (upper amphibolite facies migmatite) to margin (down to greenschist facies mylonite); some rocks in the dome core experienced isothermal decompression revealed by disequilibrium reaction textures, particularly in mafic rocks (including eclogite); and results of U-Pb geochrononology indicate a narrow range of metamorphic crystallization from core to mantling schist spanning ~10 Myr. 3D numerical modeling of transdomes show that the dome solicits a larger source region of partially molten lower crust compared to 2D models; this flowing crust creates a double-dome architecture as in 2D models but there are differences in the predicted thermal history and flow paths. In a transtension setting, flow lines converge at depth (radial-centripetal flow) toward the zone of extension and diverge at shallow levels in a more uniform direction that is imposed by upper crust motion and deformation. This evolution produces a characteristic pattern of strain history, progressive fabric overprint, and P-T paths that are comparable to observed dome rocks.

The Discovery Dome: A Tool for Increasing Student Engagement

NASA Astrophysics Data System (ADS)

Brevik, Corinne

2015-04-01

The Discovery Dome is a portable full-dome theater that plays professionally-created science films. Developed by the Houston Museum of Natural Science and Rice University, this inflatable planetarium offers a state-of-the-art visual learning experience that can address many different fields of science for any grade level. It surrounds students with roaring dinosaurs, fascinating planets, and explosive storms - all immersive, engaging, and realistic. Dickinson State University has chosen to utilize its Discovery Dome to address Earth Science education at two levels. University courses across the science disciplines can use the Discovery Dome as part of their curriculum. The digital shows immerse the students in various topics ranging from astronomy to geology to weather and climate. The dome has proven to be a valuable tool for introducing new material to students as well as for reinforcing concepts previously covered in lectures or laboratory settings. The Discovery Dome also serves as an amazing science public-outreach tool. University students are trained to run the dome, and they travel with it to schools and libraries around the region. During the 2013-14 school year, our Discovery Dome visited over 30 locations. Many of the schools visited are in rural settings which offer students few opportunities to experience state-of-the-art science technology. The school kids are extremely excited when the Discovery Dome visits their community, and they will talk about the experience for many weeks. Traveling with the dome is also very valuable for the university students who get involved in the program. They become very familiar with the science content, and they gain experience working with teachers as well as the general public. They get to share their love of science, and they get to help inspire a new generation of scientists.

Robotic Manufacturing of 5.5 Meter Cryogenic Fuel Tank Dome Assemblies for the NASA Ares I Rocket

NASA Technical Reports Server (NTRS)

Jones, Ronald E.

2012-01-01

The Ares I rocket is the first launch vehicle scheduled for manufacture under the National Aeronautic and Space Administration's (NASA's) Constellation program. A series of full-scale Ares I development articles have been constructed on the Robotic Weld Tool at the NASA George C. Marshall Space Flight Center in Huntsville, Alabama. The Robotic Weld Tool is a 100 ton, 7-axis, robotic manufacturing system capable of machining and friction stir welding large-scale space hardware. This presentation will focus on the friction stir welding of 5.5m diameter cryogenic fuel tank components; specifically, the liquid hydrogen forward dome (LH2 MDA), the common bulkhead manufacturing development articles (CBMDA) and the thermal protection system demonstration dome (TPS Dome). The LH2 MDA was the first full-scale, flight-like Ares I hardware produced under the Constellation Program. It is a 5.5m diameter elliptical dome assembly consisting of eight gore panels, a y-ring stiffener and a manhole fitting. All components are made from aluminumlithium alloy 2195. Conventional and self-reacting friction stir welding was used on this article. An overview of the manufacturing processes will be discussed. The LH2 MDA is the first known fully friction stir welded dome ever produced. The completion of four Common Bulkhead Manufacturing Development Articles (CBMDA) and the TPS Dome will also be highlighted. Each CBMDA and the TPS Dome consists of a 5.5m diameter spun-formed dome friction stir welded to a y-ring stiffener. The domes and y-rings are made of aluminum 2014 and 2219 respectively. The TPS Dome has an additional aluminum alloy 2195 barrel section welded to the y-ring. Manufacturing solutions will be discussed including "fixtureless" welding with self reacting friction stir welding.

Emplacement of Volcanic Domes on Venus and Europa

NASA Technical Reports Server (NTRS)

Quick, Lynnae C.; Glaze, Lori S.; Baloga, Steve M.

2015-01-01

Placing firmer constraints on the emplacement timescales of visible volcanic features is essential to obtaining a better understanding of the resurfacing history of Venus. Fig. 1 shows a Magellan radar image and topography for a putative venusian lava dome. 175 such domes have been identified, having diameters that range from 19 - 94 km, and estimated thicknesses as great as 4 km [1-2]. These domes are thought to be volcanic in origin [3], having formed by the flow of a viscous fluid (i.e., lava) onto the surface. Among the unanswered questions surrounding the formation of Venus steep-sided domes are their emplacement duration, composition, and the rheology of the lava. Rheologically speaking, maintenance of extremely thick, 1-4 km flows necessitates higher viscosity lavas, while the domes' smooth upper surfaces imply the presence of lower viscosity lavas [2-3]. Further, numerous quantitative issues, such as the nature and duration of lava supply, how long the conduit remained open and capable of supplying lava, the volumetric flow rate, and the role of rigid crust in influencing flow and final morphology all have implications for subsurface magma ascent and local surface stress conditions. The surface of Jupiter's icy moon Europa exhibits many putative cryovolcanic constructs [5-7], and previous workers have suggested that domical positive relief features imaged by the Galileo spacecraft may be volcanic in origin [5,7-8] (Fig. 2). Though often smaller than Venus domes, if emplaced as a viscous fluid, formation mechanisms for europan domes may be similar to those of venusian domes [7]. Models for the emplacement of venusian lava domes (e.g. [9-10]) have been previously applied to the formation of putative cryolava domes on Europa [7].

Changes in lava effusion rate, explosion characteristics and degassing revealed by time-series photogrammetry and feature tracking velocimetry of Santiaguito lava dome

NASA Astrophysics Data System (ADS)

Andrews, B. J.; Grocke, S.; Benage, M.

2016-12-01

The Santiaguito dome complex, Guatemala, provides a unique opportunity to observe an active lava dome with an array of DSLR and video cameras from the safety of Santa Maria volcano, a vantage point 2500 m away from and 1000 m above the dome. Radio triggered DSLR cameras can collect synchronized images at rates up to 10 frames/minute. Single-camera datasets describe lava dome surface motions and application of Feature-Tracking-Velocimetry (FTV) to the image sequences measures apparent lava flow surface velocities (as projected onto the camera-imaging plane). Multi-camera datasets describe the lava dome surface topography and 3D velocity field; this 4D photogrammetric approach yields georeferenced point clouds and DEMs with specific points or features tracked through time. HD video cameras document explosions and characterize those events as comparatively gas-rich or ash-rich. Comparison of observations collected during January and November 2012 and January 2016 reveals changes in the effusion rate and explosion characteristics at the active Santiaguito dome that suggest a change in shallow degassing behavior. The 2012 lava dome had numerous incandescent regions and surface velocities of 3 m/hr along the southern part of the dome summit where the dome fed a lava flow. The 2012 dome also showed a remarkably periodic (26±6 minute) pattern of inflation and deflation interpreted to reflect gas accumulation and release, with some releases occurring explosively. Video observations show that the explosion plumes were generally ash-poor. In contrast, the January 2016 dome exhibited very limited incandescence, and had reduced surface velocities of <1 m/hr. Explosions occurred infrequently, but were generally longer duration ( e.g. 90-120 s compared to 30 s) and more ash-rich than those in 2012. We suggest that the reduced lava effusion rate in 2016 produced a net increase in the gas accumulation capacity of the shallow magma, and thus larger, less-frequent explosions. These findings indicate that gas permeability may be proportional to magma ascent and strain rate in dome-forming eruptions.

Protective Effects of Trehalose on the Corneal Epithelial Cells

PubMed Central

Aragona, Pasquale; Colosi, Pietro; Colosi, Francesca; Pisani, Antonina; Puzzolo, Domenico; Micali, Antonio

2014-01-01

Purpose. Aim of the present work was to evaluate the effects of the trehalose on the corneal epithelium undergoing alcohol delamination. Methods. Twelve patients undergoing laser subepithelial keratomileusis (LASEK) were consecutively included in the study. The right eyes were pretreated with 3% trehalose eye drops, whilst left eyes were used as control. Epithelial specimens were processed for cells vitality assessment, apoptosis, and light and transmission electron microscopy; a morphometric analysis was performed in both groups. Results. In both trehalose-untreated eyes (TUE) and trehalose-treated eyes (TTE), the percentage of vital cells was similar and no apoptotic cells were observed. In TUE, the corneal epithelium showed superficial cells with reduced microfolds, wing cells with vesicles and dilated intercellular spaces, and dark basal cells with vesicles and wide clefts. In TTE, superficial and wing cells were better preserved, and basal cells were generally clear with intracytoplasmatic vesicles. The morphometric analysis showed statistically significant differences between the two groups: the TTE epithelial height was higher, the basal cells showed larger area and clearer cytoplasm. The distribution of desmosomes and hemidesmosomes was significantly different between the groups. Conclusions. Trehalose administration better preserved morphological and morphometric features of alcohol-treated corneal epithelium, when compared to controls. PMID:25045743

Protective effects of trehalose on the corneal epithelial cells.

PubMed

Aragona, Pasquale; Colosi, Pietro; Rania, Laura; Colosi, Francesca; Pisani, Antonina; Puzzolo, Domenico; Micali, Antonio

2014-01-01

Aim of the present work was to evaluate the effects of the trehalose on the corneal epithelium undergoing alcohol delamination. Twelve patients undergoing laser subepithelial keratomileusis (LASEK) were consecutively included in the study. The right eyes were pretreated with 3% trehalose eye drops, whilst left eyes were used as control. Epithelial specimens were processed for cells vitality assessment, apoptosis, and light and transmission electron microscopy; a morphometric analysis was performed in both groups. In both trehalose-untreated eyes (TUE) and trehalose-treated eyes (TTE), the percentage of vital cells was similar and no apoptotic cells were observed. In TUE, the corneal epithelium showed superficial cells with reduced microfolds, wing cells with vesicles and dilated intercellular spaces, and dark basal cells with vesicles and wide clefts. In TTE, superficial and wing cells were better preserved, and basal cells were generally clear with intracytoplasmatic vesicles. The morphometric analysis showed statistically significant differences between the two groups: the TTE epithelial height was higher, the basal cells showed larger area and clearer cytoplasm. The distribution of desmosomes and hemidesmosomes was significantly different between the groups. Trehalose administration better preserved morphological and morphometric features of alcohol-treated corneal epithelium, when compared to controls.

Computational modeling of lava domes using particle dynamics to investigate the effect of conduit flow mechanics on flow patterns

NASA Astrophysics Data System (ADS)

Husain, Taha Murtuza

Large (1--4 x 106 m3) to major (> 4 x 106 m3) dome collapses for andesitic lava domes such as Soufriere Hills Volcano, Montserrat are observed for elevated magma discharge rates (6--13 m3/s). The gas rich magma pulses lead to pressure build up in the lava dome that result in structural failure of the over steepened canyon-like walls which may lead to rockfall or pyroclastic flow. This indicates that dome collapse intimately related to magma extrusion rate. Variation in magma extrusion rate for open-system magma chambers is observed to follow alternating periods of high and low activity. Periodic behavior of magma exhibits a rich diversity in the nature of its eruptive history due to variation in magma chamber size, total crystal content, linear crystal growth rate and magma replenishment rate. Distinguished patterns of growth were observed at different magma flow rates ranging from endogenous to exogenous dome growth for magma with varying strengths. Determining the key parameters that control the transition in flow pattern of the magma during its lava dome building eruption is the main focus. This dissertation examines the mechanical effects on the morphology of the evolving lava dome on the extrusion of magma from a central vent using a 2D particle dynamics model. The particle dynamics model is coupled with a conduit flow model that incorporates the kinetics of crystallization and rheological stiffening to investigate important mechanisms during lava dome building eruptions. Chapter I of this dissertation explores lava dome growth and failure mechanics using a two-dimensional particle-dynamics model. The model follows the evolution of fractured lava, with solidification driven by degassing induced crystallization of magma. The particle-dynamics model emulates the natural development of dome growth and rearrangement of the lava dome which is difficult in mesh-based analyses due to mesh entanglement effects. The deformable talus evolves naturally as a frictional carapace that caps a ductile magma core. Extrusion rate and magma rheology together with crystallization temperature and volatile content govern the distribution of strength in the composite structure. This new model is calibrated against existing observational models of lava dome growth. Chapter II of this dissertation explores the effects of a spectrum of different rheological regimes, on eruptive style and morphologic evolution of lava domes, using a two-dimensional (2D) particle-dynamics model for a spreading viscoplastic (Bingham) fluid. We assume that the ductile magma core of a 2-D synthetic lava dome develops finite yield strength, and that deformable frictional talus evolves from a carapace that caps the magma core. Our new model is calibrated against an existing analytical model for a spreading viscoplastic lava dome and is further compared against observational data of lava dome growth. Chapter III of this dissertation explores different lava-dome styles by developing a two-dimensional particle-dynamics model. These growth patterns range from endogenous lava dome growth comprising expansion of a ductile dome core to the exogenous extrusion of a degassed lava plug resulting in generation of a lava spine. We couple conduit flow dynamics with surface growth of the evolving lava dome, fueled by an open-system magma chamber undergoing continuous replenishment. The conduit flow model accounts for the variation in rheology of ascending magma that results from degassing-induced crystallization. Chapter IV of this dissertation explores the Variation in the extruding lava flow patterns range from endogenous dome growth with a ductile core to the exogenous extrusion of a degassed lava plug that results in the generation of a spine. The variations are a manifestation of the changes in the magma rheology which is governed by magma composition and rate of decompression of the ascending magma. We simulate using a two-dimensional particle-dynamics model, the cyclic behavior of lava dome growth with endogenous growth at high discharge rates followed by exogenous extrusion of rheologically stiffened lava due to degassing induced crystallization at low discharge rates. We couple conduit flow dynamics with surface growth of the evolving lava dome which is fueled by an overpressured reservoir undergoing constant replenishment. The periodic behavior between magma chamber pressure and discharge rate is reproduced as a result of the temporal and spatial change in magma viscosity controlled by crystallization kinetics. Dimensionless numbers are used to map the flow behaviors with the changing extrusion regime. A dimensionless plot identifying the flow transition region during the growth cycle of an evolving lava dome in its lava dome eruptive period is presented. The plot provides a the threshold value of a dimensionless strength parameter (pi 2 < 3.31 x 10-4) below which the transition in flow pattern occurs from endogenously evolving lava dome with a ductile core to the development of a shear lobe for short or long lived periodic episode of the extrusion of magma. (Abstract shortened by UMI.).

Geomechanical Model Calibration Using Field Measurements for a Petroleum Reserve

NASA Astrophysics Data System (ADS)

Park, Byoung Yoon; Sobolik, Steven R.; Herrick, Courtney G.

2018-03-01

A finite element numerical analysis model has been constructed that consists of a mesh that effectively captures the geometries of Bayou Choctaw (BC) Strategic Petroleum Reserve (SPR) site and multimechanism deformation (M-D) salt constitutive model using the daily data of actual wellhead pressure and oil-brine interface location. The salt creep rate is not uniform in the salt dome, and the creep test data for BC salt are limited. Therefore, the model calibration is necessary to simulate the geomechanical behavior of the salt dome. The cavern volumetric closures of SPR caverns calculated from CAVEMAN are used as the field baseline measurement. The structure factor, A 2, and transient strain limit factor, K 0, in the M-D constitutive model are used for the calibration. The value of A 2, obtained experimentally from BC salt, and the value of K 0, obtained from Waste Isolation Pilot Plant salt, are used for the baseline values. To adjust the magnitude of A 2 and K 0, multiplication factors A 2 F and K 0 F are defined, respectively. The A 2 F and K 0 F values of the salt dome and salt drawdown skins surrounding each SPR cavern have been determined through a number of back analyses. The cavern volumetric closures calculated from this model correspond to the predictions from CAVEMAN for six SPR caverns. Therefore, this model is able to predict behaviors of the salt dome, caverns, caprock, and interbed layers. The geotechnical concerns associated with the BC site from this analysis will be explained in a follow-up paper.

Geomechanical Model Calibration Using Field Measurements for a Petroleum Reserve

DOE PAGES

Park, Byoung Yoon; Sobolik, Steven R.; Herrick, Courtney G.

2018-01-19

A finite element numerical analysis model has been constructed that consists of a mesh that effectively captures the geometries of Bayou Choctaw (BC) Strategic Petroleum Reserve (SPR) site and multimechanism deformation (M-D) salt constitutive model using the daily data of actual wellhead pressure and oil–brine interface location. The salt creep rate is not uniform in the salt dome, and the creep test data for BC salt are limited. Therefore, the model calibration is necessary to simulate the geomechanical behavior of the salt dome. The cavern volumetric closures of SPR caverns calculated from CAVEMAN are used as the field baseline measurement.more » The structure factor, A 2, and transient strain limit factor, K o, in the M-D constitutive model are used for the calibration. The value of A 2, obtained experimentally from BC salt, and the value of K o, obtained from Waste Isolation Pilot Plant salt, are used for the baseline values. To adjust the magnitude of A 2 and K0, multiplication factors A 2 F and K o F are defined, respectively. The A 2 F and K0F values of the salt dome and salt drawdown skins surrounding each SPR cavern have been determined through a number of back analyses. The cavern volumetric closures calculated from this model correspond to the predictions from CAVEMAN for six SPR caverns. Therefore, this model is able to predict behaviors of the salt dome, caverns, caprock, and interbed layers. In conclusion, the geotechnical concerns associated with the BC site from this analysis will be explained in a follow-up paper.« less

Geomechanical Model Calibration Using Field Measurements for a Petroleum Reserve

DOE Office of Scientific and Technical Information (OSTI.GOV)

Park, Byoung Yoon; Sobolik, Steven R.; Herrick, Courtney G.

A finite element numerical analysis model has been constructed that consists of a mesh that effectively captures the geometries of Bayou Choctaw (BC) Strategic Petroleum Reserve (SPR) site and multimechanism deformation (M-D) salt constitutive model using the daily data of actual wellhead pressure and oil–brine interface location. The salt creep rate is not uniform in the salt dome, and the creep test data for BC salt are limited. Therefore, the model calibration is necessary to simulate the geomechanical behavior of the salt dome. The cavern volumetric closures of SPR caverns calculated from CAVEMAN are used as the field baseline measurement.more » The structure factor, A 2, and transient strain limit factor, K o, in the M-D constitutive model are used for the calibration. The value of A 2, obtained experimentally from BC salt, and the value of K o, obtained from Waste Isolation Pilot Plant salt, are used for the baseline values. To adjust the magnitude of A 2 and K0, multiplication factors A 2 F and K o F are defined, respectively. The A 2 F and K0F values of the salt dome and salt drawdown skins surrounding each SPR cavern have been determined through a number of back analyses. The cavern volumetric closures calculated from this model correspond to the predictions from CAVEMAN for six SPR caverns. Therefore, this model is able to predict behaviors of the salt dome, caverns, caprock, and interbed layers. In conclusion, the geotechnical concerns associated with the BC site from this analysis will be explained in a follow-up paper.« less

NST: Thermal Modeling for a Large Aperture Solar Telescope

NASA Astrophysics Data System (ADS)

Coulter, Roy

2011-05-01

Late in the 1990s the Dutch Open Telescope demonstrated that internal seeing in open, large aperture solar telescopes can be controlled by flushing air across the primary mirror and other telescope structures exposed to sunlight. In that system natural wind provides a uniform air temperature throughout the imaging volume, while efficiently sweeping heated air away from the optics and mechanical structure. Big Bear Solar Observatory's New Solar Telescope (NST) was designed to realize that same performance in an enclosed system by using both natural wind through the dome and forced air circulation around the primary mirror to provide the uniform air temperatures required within the telescope volume. The NST is housed in a conventional, ventilated dome with a circular opening, in place of the standard dome slit, that allows sunlight to fall only on an aperture stop and the primary mirror. The primary mirror is housed deep inside a cylindrical cell with only minimal openings in the side at the level of the mirror. To date, the forced air and cooling systems designed for the NST primary mirror have not been implemented, yet the telescope regularly produces solar images indicative of the absence of mirror seeing. Computational Fluid Dynamics (CFD) analysis of the NST primary mirror system along with measurements of air flows within the dome, around the telescope structure, and internal to the mirror cell are used to explain the origin of this seemingly incongruent result. The CFD analysis is also extended to hypothetical systems of various scales. We will discuss the results of these investigations.

Lujiatun Psittacosaurids: Understanding Individual and Taphonomic Variation Using 3D Geometric Morphometrics

PubMed Central

Hedrick, Brandon P.; Dodson, Peter

2013-01-01

Psittacosaurus is one of the most abundant and speciose genera in the Dinosauria, with fifteen named species. The genus is geographically and temporally widespread with large sample sizes of several of the nominal species allowing detailed analysis of intra- and interspecific variation. We present a reanalysis of three separate, coeval species within the Psittacosauridae; P. lujiatunensis, P. major, and Hongshanosaurus houi from the Lujiatun beds of the Yixian Formation, northeastern China, using three-dimensional geometric morphometrics on a sample set of thirty skulls in combination with a reevaluation of the proposed character states for each species. Using these complementary methods, we show that individual and taphonomic variation are the joint causes of a large range of variation among the skulls when they are plotted in a morphospace. Our results demonstrate that there is only one species of Psittacosaurus within the Lujiatun beds and that the three nominal species represent different taphomorphotypes of P. lujiatunensis. The wide range of geometric morphometric variation in a single species of Psittacosaurus implies that the range of variation found in other dinosaurian groups may also be related to taphonomic distortion rather than interspecific variation. As the morphospace is driven primarily by variation resulting from taphonomic distortion, this study demonstrates that the geometric morphometric approach can only be used with great caution to delineate interspecific variation in Psittacosaurus and likely other dinosaur groups without a complementary evaluation of character states. This study presents the first application of 3D geometric morphometrics to the dinosaurian morphospace and the first attempt to quantify taphonomic variation in dinosaur skulls. PMID:23950887

3D Analysis of Human Embryos and Fetuses Using Digitized Datasets From the Kyoto Collection.

PubMed

Takakuwa, Tetsuya

2018-06-01

Three-dimensional (3D) analysis of the human embryonic and early-fetal period has been performed using digitized datasets obtained from the Kyoto Collection, in which the digital datasets play a primary role in research. Datasets include magnetic resonance imaging (MRI) acquired with 1.5 T, 2.35 T, and 7 T magnet systems, phase-contrast X-ray computed tomography (CT), and digitized histological serial sections. Large, high-resolution datasets covering a broad range of developmental periods obtained with various methods of acquisition are key elements for the studies. The digital data have gross merits that enabled us to develop various analysis. Digital data analysis accelerated the speed of morphological observations using precise and improved methods by providing a suitable plane for a morphometric analysis from staged human embryos. Morphometric data are useful for quantitatively evaluating and demonstrating the features of development and for screening abnormal samples, which may be suggestive in the pathogenesis of congenital malformations. Morphometric data are also valuable for comparing sonographic data in a process known as "sonoembryology." The 3D coordinates of anatomical landmarks may be useful tools for analyzing the positional change of interesting landmarks and their relationships during development. Several dynamic events could be explained by differential growth using 3D coordinates. Moreover, 3D coordinates can be utilized in mathematical analysis as well as statistical analysis. The 3D analysis in our study may serve to provide accurate morphologic data, including the dynamics of embryonic structures related to developmental stages, which is required for insights into the dynamic and complex processes occurring during organogenesis. Anat Rec, 301:960-969, 2018. © 2018 Wiley Periodicals, Inc. © 2018 Wiley Periodicals, Inc.

Automated morphometry provides accurate and reproducible virtual staging of liver fibrosis in chronic hepatitis C

PubMed Central

Calès, Paul; Chaigneau, Julien; Hunault, Gilles; Michalak, Sophie; Cavaro-Menard, Christine; Fasquel, Jean-Baptiste; Bertrais, Sandrine; Rousselet, Marie-Christine

2015-01-01

Background: Liver fibrosis staging provides prognostic value, although hampered by observer variability. We used digital analysis to develop diagnostic morphometric scores for significant fibrosis, cirrhosis and fibrosis staging in chronic hepatitis C. Materials and Methods: We automated the measurement of 44 classical and new morphometric descriptors. The reference was histological METAVIR fibrosis (F) staging (F0 to F4) on liver biopsies. The derivation population included 416 patients and liver biopsies ≥20 mm-length. Two validation population included 438 patients. Results: In the derivation population, the area under the receiver operating characteristic (AUROC) for clinically significant fibrosis (F stage ≥2) of a logistic score combining 5 new descriptors (stellar fibrosis area, edge linearity, bridge thickness, bridge number, nodularity) was 0.957. The AUROC for cirrhosis of 6 new descriptors (edge linearity, nodularity, portal stellar fibrosis area, portal distance, granularity, fragmentation) was 0.994. Predicted METAVIR F staging combining 8 morphometric descriptors agreed well with METAVIR F staging by pathologists: κ = 0.868. Morphometric score of clinically significant fibrosis had a higher correlation with porto-septal fibrosis area (rs = 0.835) than METAVIR F staging (rs = 0.756, P < 0.001) and the same correlations with fibrosis biomarkers, e.g., serum hyaluronate: rs = 0.484 versus rs = 0.476 for METAVIR F (P = 0.862). In the validation population, the AUROCs of clinically significant fibrosis and cirrhosis scores were, respectively: 0.893 and 0.993 in 153 patients (biopsy < 20 mm); 0.955 and 0.994 in 285 patients (biopsy ≥ 20 mm). The three morphometric diagnoses agreed with consensus expert reference as well as or better than diagnoses by first-line pathologists in 285 patients, respectively: significant fibrosis: 0.733 versus 0.733 (κ), cirrhosis: 0.900 versus 0.827, METAVIR F: 0.881 versus 0.865. Conclusion: The new automated morphometric scores provide reproducible and accurate diagnoses of fibrosis stages via “virtual expert pathologist.” PMID:26110088

Dome, Sweet Dome--Geodesic Structures Teach Math, Science, and Technology Principles

ERIC Educational Resources Information Center

Shackelford, Ray; Fitzgerald, Michael

2007-01-01

Today, geodesic domes are found on playgrounds, homes, over radar installations, storage facilities, at Disney's Epcot Center, and at World's Fairs. The inventor of the design, Buckminster Fuller, thought that geodesic domes could be used to cover large areas and even designed one to cover all of New York's Manhattan Island. This article details…

Venusian pancake domes: Insights from terrestrial voluminous silicic lavas and thermal modeling

NASA Technical Reports Server (NTRS)

Manley, Curtis R.

1993-01-01

The so-called 'pancake' domes, and several other volcanoes on Venus, appear to represent large extrusions of silicic lava. Similar voluminous rhyolite lava flows, often associated with mantle plumes, are known on Earth. Venus' high ambient temperature, and insulation by the dome's brecciated carapace, both act to prolong cooling of a dome's interior, allowing for episodic lava input over an extended period of time. Field relations and aspect ratios of terrestrial voluminous rhyolite lavas imply continuous, non-episodic growth, reflecting tapping of a large volume of dry, anatectic silicic magma. Petrogenetically, the venusian domes may be analogous to chains of small domes on Earth, which represent 'leakage' of evolved material from magma bodies fractionating from much more mafic liquids.

Insights into Corona Formation through Statistical Analyses

NASA Technical Reports Server (NTRS)

Glaze, L. S.; Stofan, E. R.; Smrekar, S. E.; Baloga, S. M.

2002-01-01

Statistical analysis of an expanded database of coronae on Venus indicates that the populations of Type 1 (with fracture annuli) and 2 (without fracture annuli) corona diameters are statistically indistinguishable, and therefore we have no basis for assuming different formation mechanisms. Analysis of the topography and diameters of coronae shows that coronae that are depressions, rimmed depressions, and domes tend to be significantly smaller than those that are plateaus, rimmed plateaus, or domes with surrounding rims. This is consistent with the model of Smrekar and Stofan and inconsistent with predictions of the spreading drop model of Koch and Manga. The diameter range for domes, the initial stage of corona formation, provides a broad constraint on the buoyancy of corona-forming plumes. Coronae are only slightly more likely to be topographically raised than depressions, with Type 1 coronae most frequently occurring as rimmed depressions and Type 2 coronae most frequently occuring with flat interiors and raised rims. Most Type 1 coronae are located along chasmata systems or fracture belts, while Type 2 coronas are found predominantly as isolated features in the plains. Coronae at hotspot rises tend to be significantly larger than coronae in other settings, consistent with a hotter upper mantle at hotspot rises and their active state.

Sequential dome-collapse nuées ardentes analyzed from broadband seismic data, Merapi Volcano, Indonesia

USGS Publications Warehouse

Brodscholl, A.; Kirbani, S.B.; Voight, B.

2000-01-01

The broadband data were evaluated using the assumption that avalanches with the same source areas and descent paths exhibit a linear relation between source volume and recorded seismic-amplitude envelope area. A result of the analysis is the determination of the volume of selected individual events. From the field surveys, the total volume of the collapsed dome lava is 2.6 Mm3. Discounting the volumetric influence of rockfalls, the average size of the 44 nuées ardentes is therefore about 60,000 m3. The largest collapse event at 10:54 is estimated to involve 260,000 m3, based on an analysis of the seismicity. The remaining 23 phase I events averaged 60,000 m3, with the total volume of all phase I events accounting for 63% of the unstable dome. The 20 phase II events comprised 37% of the total volume and averaged 47,000 m3. The methods described here can be put to practical use in real-time monitoring situations. Broadband data were essential in this study primarily because of the wide dynamic range.

Petrographic Analysis and Geochemical Source Correlation of Pigeon Peak, Sutter Buttes, CA

NASA Astrophysics Data System (ADS)

Novotny, N. M.; Hausback, B. P.

2013-12-01

The Sutter Buttes are a volcanic complex located in the center of the Great Valley north of Sacramento. They are comprised of numerous inter-intruding andesite and rhyolite lava domes of varying compositions surrounded by a shallow rampart of associated tephras. The Pigeon Peak block-and-ash flow sequence is located in the rampart and made up of a porphyritic Biotite bearing Hornblende Andesite. The andesite blocks demonstrate a high degree of propylization in hornblende crystals, highly zoned plagioclase, trace olivine, and display a red to gray color gradation. DAR is an andesite dome located less than one mile from Pigeon Peak. Of the 15 to 25 andesite lava domes within four miles from Pigeon Peak, only DAR displays trace olivine, red to grey color stratification, low biotite content, and propylitized hornblende. These characteristic similarities suggest that DAR may be the source for Pigeon Peak. My investigation used microprobe analysis of the DAR and Pigeon Peak feldspar crystals to identify the magmatic history of the magma body before emplacement. Correlation of the anorthite zoning within the feldspars from both locations support my hypothesis that DAR is the source of the Pigeon Peak block-and-ash flow.

Designing, Modeling, Constructing, and Testing a Flat Panel Speaker and Sound Diffuser for a Simulator

NASA Technical Reports Server (NTRS)

Dillon, Christina

2013-01-01

The goal of this project was to design, model, build, and test a flat panel speaker and frame for a spherical dome structure being made into a simulator. The simulator will be a test bed for evaluating an immersive environment for human interfaces. This project focused on the loud speakers and a sound diffuser for the dome. The rest of the team worked on an Ambisonics 3D sound system, video projection system, and multi-direction treadmill to create the most realistic scene possible. The main programs utilized in this project, were Pro-E and COMSOL. Pro-E was used for creating detailed figures for the fabrication of a frame that held a flat panel loud speaker. The loud speaker was made from a thin sheet of Plexiglas and 4 acoustic exciters. COMSOL, a multiphysics finite analysis simulator, was used to model and evaluate all stages of the loud speaker, frame, and sound diffuser. Acoustical testing measurements were utilized to create polar plots from the working prototype which were then compared to the COMSOL simulations to select the optimal design for the dome. The final goal of the project was to install the flat panel loud speaker design in addition to a sound diffuser on to the wall of the dome. After running tests in COMSOL on various speaker configurations, including a warped Plexiglas version, the optimal speaker design included a flat piece of Plexiglas with a rounded frame to match the curvature of the dome. Eight of these loud speakers will be mounted into an inch and a half of high performance acoustic insulation, or Thinsulate, that will cover the inside of the dome. The following technical paper discusses these projects and explains the engineering processes used, knowledge gained, and the projected future goals of this project

Glomerular anionic site distribution in nonproteinuric rats. A computer-assisted morphometric analysis.

PubMed

Pilia, P A; Swain, R P; Williams, A V; Loadholt, C B; Ainsworth, S K

1985-12-01

The cationic ultrastructural tracer polyethyleneimine (PEI: pI approximately equal to 11.0), binds electrophysically to uniformly spaced discrete electron-dense anionic sites present in the laminae rarae of the rat glomerular basement membrane (GBM), mesangial reflections of the GBM, Bowman's capsule, and tubular basement membranes when administered intravenously. Computer-assisted morphometric analysis of glomerular anionic sites reveals that the maximum concentration of stainable lamina rara externa (lre) sites (21/10,000 A GBM) occurs 60 minutes after PEI injection with a site-site interspacing of 460 A. Lamina rara interna (lri) sites similarly demonstrate a maximum concentration (20/10,000 A GBM) at 60 minutes with a periodicity of 497 A. The concentration and distribution of anionic sites within the lri was irregular in pattern and markedly decreased in number, while the lre possesses an electrical field that is highly regular at all time intervals analyzed (15, 30, 60, 120, 180, 240, and 300 minutes). Immersion and perfusion of renal tissue with PEI reveals additional heavy staining of the epithelial and endothelial cell sialoprotein coatings. PEI appears to bind to glomerular anionic sites reversibly: ie, between 60 and 180 minutes the concentration of stained sites decreases. At 300 minutes, the interspacing once again approaches the 60-minute concentration. This suggests a dynamic turnover or dissociation followed by a reassociation of glomerular negatively charged PEI binding sites. In contrast, morphometric analysis of anionic sites stained with lysozyme and protamine sulfate reveals interspacings of 642 A and 585 A, respectively; in addition, these tracers produce major glomerular ultrastructural alterations and induce transient proteinuria. PEI does not induce proteinuria in rats, nor does it produce glomerular morphologic alterations when ten times the tracer dosage is administered intravenously. These findings indicate that the choice of ultrastructural charge tracer, the method of administering the tracer, and the time selected for analysis of tissue after administration of tracer significantly influences results. Morphometric analysis of the distribution of glomerular anionic sites in nonproteinuric rats provides a method of evaluating quantitative alterations of the glomerular charge barrier in renal disease models.

Comparison of corneal endothelial image analysis by Konan SP8000 noncontact and Bio-Optics Bambi systems.

PubMed

Benetz, B A; Diaconu, E; Bowlin, S J; Oak, S S; Laing, R A; Lass, J H

1999-01-01

Compare corneal endothelial image analysis by Konan SP8000 and Bio-Optics Bambi image-analysis systems. Corneal endothelial images from 98 individuals (191 eyes), ranging in age from 4 to 87 years, with a normal slit-lamp examination and no history of ocular trauma, intraocular surgery, or intraocular inflammation were obtained by the Konan SP8000 noncontact specular microscope. One observer analyzed these images by using the Konan system and a second observer by using the Bio-Optics Bambi system. Three methods of analyses were used: a fixed-frame method to obtain cell density (for both Konan and Bio-Optics Bambi) and a "dot" (Konan) or "corners" (Bio-Optics Bambi) method to determine morphometric parameters. The cell density determined by the Konan fixed-frame method was significantly higher (157 cells/mm2) than the Bio-Optics Bambi fixed-frame method determination (p<0.0001). However, the difference in cell density, although still statistically significant, was smaller and reversed comparing the Konan fixed-frame method with both Konan dot and Bio-Optics Bambi comers method (-74 cells/mm2, p<0.0001; -55 cells/mm2, p<0.0001, respectively). Small but statistically significant morphometric analyses differences between Konan and Bio-Optics Bambi were seen: cell density, +19 cells/mm2 (p = 0.03); cell area, -3.0 microm2 (p = 0.008); and coefficient of variation, +1.0 (p = 0.003). There was no statistically significant difference between these two methods in the percentage of six-sided cells detected (p = 0.55). Cell densities measured by the Konan fixed-frame method were comparable with Konan and Bio-Optics Bambi's morphometric analysis, but not with the Bio-Optics Bambi fixed-frame method. The two morphometric analyses were comparable with minimal or no differences for the parameters that were studied. The Konan SP8000 endothelial image-analysis system may be useful for large-scale clinical trials determining cell loss; its noncontact system has many clinical benefits (including patient comfort, safety, ease of use, and short procedure time) and provides reliable cell-density calculations.

Cryovolcanic emplacement of domes on Europa

NASA Astrophysics Data System (ADS)

Quick, Lynnae C.; Glaze, Lori S.; Baloga, Stephen M.

2017-03-01

Here we explore the hypothesis that certain domes on Europa may have been produced by the extrusion of viscous cryolavas. A new mathematical method for the emplacement and relaxation of viscous lava domes is presented and applied to putative cryovolcanic domes on Europa. A similarity solution approach is applied to the governing equation for fluid flow in a cylindrical geometry, and dome relaxation is explored assuming a volume of cryolava has been rapidly emplaced onto the surface. Nonphysical singularities inherent in previous models for dome relaxation have been eliminated, and cryolava cooling is represented by a time-variable viscosity. We find that at the onset of relaxation, bulk kinematic viscosities may lie in the range between 103 and 106 m2/s, while the actual fluid lava viscosity may be much lower. Plausible relaxation times to form the domes, which are linked to bulk cryolava rheology, are found to range from 3.6 days to 7.5 years. We find that cooling of the cryolava, while dominated by conduction through an icy skin, should not prevent fluids from advancing and relaxing to form domes within the timescales considered. Determining the range of emplacement conditions for putative cryolava domes will shed light on Europa's resurfacing history. In addition, the rheologies and compositions of erupted cryolavas have implications for subsurface cryomagma ascent and local surface stress conditions on Europa.

Cryovolcanic Emplacement of Domes on Europa

NASA Technical Reports Server (NTRS)

Quick, Lynnae C.; Glaze, Lori S.; Baloga, Stephen M.

2016-01-01

Here we explore the hypothesis that certain domes on Europa may have been produced by the extrusion of viscous cryolavas. A new mathematical method for the emplacement and relaxation of viscous lava domes is presented and applied to putative cryovolcanic domes on Europa. A similarity solution approach is applied to the governing equation for fluid flow in a cylindrical geometry, and dome relaxation is explored assuming a volume of cryolava has been rapidly emplaced onto the surface. Nonphysical sin- gularities inherent in previous models for dome relaxation have been eliminated, and cryolava cooling is represented by a time-variable viscosity. We find that at the onset of relaxation, bulk kinematic viscosities may lie in the range between 10(exp 3) and 10(exp 6) sq m/s, while the actual fluid lava viscosity may be much lower. Plausible relaxation times to form the domes, which are linked to bulk cryolava rheology, are found to range from 3.6 days to 7.5 years. We find that cooling of the cryolava, while dominated by conduction through an icy skin, should not prevent fluids from advancing and relaxing to form domes within the timescales considered. Determining the range of emplacement conditions for putative cryolava domes will shed light on Europa's resurfacing history. In addition, the rheologies and compositions of erupted cryolavas have implications for subsurface cryomagma ascent and local surface stress conditions on Europa.

4. TURNOUT AND RETAINING WALL AT BASE OF TURTLEBACK DOME. ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

4. TURNOUT AND RETAINING WALL AT BASE OF TURTLEBACK DOME. FACING EAST AT VIEW OF YOSEMITE VALLEY; EL CAPITAN ON LEFT, HALF DOME AT CENTER AND SENTINEL DOME AT LEFT REAR. POST AT LOWER LEFT MARKED 'W3' IS MARKER FOR SELF GUIDED TOUR TO PARK. - Wawona Road, Between South Entrance & Yosemite Valley, Yosemite Village, Mariposa County, CA

Steady states and linear stability analysis of precipitation pattern formation at geothermal hot springs.

PubMed

Chan, Pak Yuen; Goldenfeld, Nigel

2007-10-01

A dynamical theory of geophysical precipitation pattern formation is presented and applied to irreversible calcium carbonate (travertine) deposition. Specific systems studied here are the terraces and domes observed at geothermal hot springs, such as those at Yellowstone National Park, and speleothems, particularly stalactites and stalagmites. The theory couples the precipitation front dynamics with shallow water flow, including corrections for turbulent drag and curvature effects. In the absence of capillarity and with a laminar flow profile, the theory predicts a one-parameter family of steady state solutions to the moving boundary problem describing the precipitation front. These shapes match the measured shapes near the vent at the top of observed travertine domes well. Closer to the base of the dome, the solutions deviate from observations and circular symmetry is broken by a fluting pattern, which we show is associated with capillary forces causing thin film break-up. We relate our model to that recently proposed for stalactite growth, and calculate the linear stability spectrum of both travertine domes and stalactites. Lastly, we apply the theory to the problem of precipitation pattern formation arising from turbulent flow down an inclined plane and identify a linear instability that underlies scale-invariant travertine terrace formation at geothermal hot springs.

Steady states and linear stability analysis of precipitation pattern formation at geothermal hot springs

NASA Astrophysics Data System (ADS)

Chan, Pak Yuen; Goldenfeld, Nigel

2007-10-01

A dynamical theory of geophysical precipitation pattern formation is presented and applied to irreversible calcium carbonate (travertine) deposition. Specific systems studied here are the terraces and domes observed at geothermal hot springs, such as those at Yellowstone National Park, and speleothems, particularly stalactites and stalagmites. The theory couples the precipitation front dynamics with shallow water flow, including corrections for turbulent drag and curvature effects. In the absence of capillarity and with a laminar flow profile, the theory predicts a one-parameter family of steady state solutions to the moving boundary problem describing the precipitation front. These shapes match the measured shapes near the vent at the top of observed travertine domes well. Closer to the base of the dome, the solutions deviate from observations and circular symmetry is broken by a fluting pattern, which we show is associated with capillary forces causing thin film break-up. We relate our model to that recently proposed for stalactite growth, and calculate the linear stability spectrum of both travertine domes and stalactites. Lastly, we apply the theory to the problem of precipitation pattern formation arising from turbulent flow down an inclined plane and identify a linear instability that underlies scale-invariant travertine terrace formation at geothermal hot springs.

Atmospheric scintillation at Dome C, Antarctica: implications for photometry and astrometry

NASA Astrophysics Data System (ADS)

Kenyon, S.; Lawrence, J.; Ashley, M. C. B.; Storey, J. W. V.; Tokovinin, A.; Fossat, E.

2006-08-01

Night-time turbulence profiles of the atmosphere above Dome C, Antarctica, were measured during 2004, using a MASS instrument. We compare this data with turbulence profiles above Cerro Tololo and Cerro Pachon, also measured with a MASS, and find, with the exception of the owest layer, that Dome C has significantly less turbulence. In addition, the integrated at turbulence 16 km above Dome C is always less than the median values at the two Chilean sites. Using average wind speed profiles, we assess the photometric noise produced by scintillation, and the atmospheric contribution to the error budget in narrow angle differential astrometry. In comparison with the two mid-latitude sites in Chile, Dome C offers a potential gain of about 3.6 in both photometric precision (for long integrations) and narrow-angle astrometry precision. Although the data from Dome C cover a fairly limited time frame, they lend strong support to expectations that Dome C will offer significant advantages for photometric and astrometric studies.

Computer-assisted sperm morphometry fluorescence-based analysis has potential to determine progeny sex.

PubMed

Santolaria, Pilar; Pauciullo, Alfredo; Silvestre, Miguel A; Vicente-Fiel, Sandra; Villanova, Leyre; Pinton, Alain; Viruel, Juan; Sales, Ester; Yániz, Jesús L

2016-01-01

This study was designed to determine the ability of computer-assisted sperm morphometry analysis (CASA-Morph) with fluorescence to discriminate between spermatozoa carrying different sex chromosomes from the nuclear morphometrics generated and different statistical procedures in the bovine species. The study was divided into two experiments. The first was to study the morphometric differences between X- and Y-chromosome-bearing spermatozoa (SX and SY, respectively). Spermatozoa from eight bulls were processed to assess simultaneously the sex chromosome by FISH and sperm morphometry by fluorescence-based CASA-Morph. SX cells were larger than SY cells on average (P < 0.001) although with important differences between bulls. A simultaneous evaluation of all the measured features by discriminant analysis revealed that nuclear area and average fluorescence intensity were the variables selected by stepwise discriminant function analysis as the best discriminators between SX and SY. In the second experiment, the sperm nuclear morphometric results from CASA-Morph in nonsexed (mixed SX and SY) and sexed (SX) semen samples from four bulls were compared. FISH allowed a successful classification of spermatozoa according to their sex chromosome content. X-sexed spermatozoa displayed a larger size and fluorescence intensity than nonsexed spermatozoa (P < 0.05). We conclude that the CASA-Morph fluorescence-based method has the potential to find differences between X- and Y-chromosome-bearing spermatozoa in bovine species although more studies are needed to increase the precision of sex determination by this technique.

A virtual reconstruction and comparative analysis of the KNM-ER 42700 cranium.

PubMed

Bauer, Catherine C; Harvati, Katerina

2015-01-01

The taxonomic attribution of the 1.55 million year old young adult fossil calvaria KNM-ER 42700   from Ileret, Kenya, is subject to ongoing controversy. It has been attributed to H. erectus based on comparative description and linear measurements. However, 3-D geometric morphometric analysis found that this specimen fell outside the range of variation of H. erectus in its cranial shape, which was intermediate between H. erectus and modern humans. One problem is that analyses so far were conducted on the original specimen, which shows slight post-mortem distortion. Here we use a surface scan of a high resolution cast of KNM-ER 42700 to virtually reconstruct the calvaria and conduct a new 3D geometric morphometric analysis of both its original and its reconstructed shape. Our comparative sample included several specimens of H. erectus (s.l., including the subadult KNM-WT 15000), H. habilis, H. heidelbergenis (s.l.) and H. neanderthalensis, as well as early and Upper Paleolithic H. sapiens. Our principal component analysis results showed that, like the original specimen, our virtual reconstruction of KNM-ER 42700 is also intermediate in shape between fossil Homo and modern humans. Taphonomic distortion, therefore, appears to not have been a major factor affecting previous 3-D geometric morphometric analyses. The intermediate shape of KNM-ER 42700 might instead be related to the young developmental age of the specimen. Further work on reconstructing the original specimen or based on computed tomorgraphic scans is needed to confirm these results.

Overshooting top behavior of three tornado-producing thunderstorms

NASA Technical Reports Server (NTRS)

Umenhofer, T. A.

1975-01-01

The behavior of overshooting tops and jumping cirrus observed in three tornado-producing thunderstorms during the 1974 Learjet Cloud-Truth experiment is discussed. An investigation of temporal changes in the heights of overshooting domes (conglomerations of overshooting tops with diameters less than 1 km) reveals several distinctive features associated with tornadic events. There is a gradual decrease in dome height prior to tornado touchdown. Minimum dome activity occurred 5 min after, 5.5 min before, and at approximately the same time as the tornadic event in the storms observed. In all cases, dramatic dome growth at a rate of 17 to 23 m/sec immediately followed the occurrence of the minimum dome heights. There is evidence that tornado production is insensitive to the pre-touchdown maximum dome heights between 1 and 3 km.

Venus small volcano classification and description

NASA Technical Reports Server (NTRS)

Aubele, J. C.

1993-01-01

The high resolution and global coverage of the Magellan radar image data set allows detailed study of the smallest volcanoes on the planet. A modified classification scheme for volcanoes less than 20 km in diameter is shown and described. It is based on observations of all members of the 556 significant clusters or fields of small volcanoes located and described by this author during data collection for the Magellan Volcanic and Magmatic Feature Catalog. This global study of approximately 10 exp 4 volcanoes provides new information for refining small volcano classification based on individual characteristics. Total number of these volcanoes was estimated to be 10 exp 5 to 10 exp 6 planetwide based on pre-Magellan analysis of Venera 15/16, and during preparation of the global catalog, small volcanoes were identified individually or in clusters in every C1-MIDR mosaic of the Magellan data set. Basal diameter (based on 1000 measured edifices) generally ranges from 2 to 12 km with a mode of 34 km, and follows an exponential distribution similar to the size frequency distribution of seamounts as measured from GLORIA sonar images. This is a typical distribution for most size-limited natural phenomena unlike impact craters which follow a power law distribution and continue to infinitely increase in number with decreasing size. Using an exponential distribution calculated from measured small volcanoes selected globally at random, we can calculate total number possible given a minimum size. The paucity of edifice diameters less than 2 km may be due to inability to identify very small volcanic edifices in this data set; however, summit pits are recognizable at smaller diameters, and 2 km may represent a significant minimum diameter related to style of volcanic eruption. Guest, et al, discussed four general types of small volcanic edifices on Venus: (1) small lava shields; (2) small volcanic cones; (3) small volcanic domes; and (4) scalloped margin domes ('ticks'). Steep-sided domes or 'pancake domes', larger than 20 km in diameter, were included with the small volcanic domes. For the purposes of this study, only volcanic edifices less than 20 km in diameter are discussed. This forms a convenient cutoff since most of the steep-sided domes ('pancake domes') and scalloped margin domes ('ticks') are 20 to 100 km in diameter, are much less numerous globally than are the smaller diameter volcanic edifices (2 to 3 orders of magnitude lower in total global number), and do not commonly occur in large clusters or fields of large numbers of edifices.

Eruptive mechanism at Volcán de Colima: Interpreting transitions between styles

NASA Astrophysics Data System (ADS)

Varley, N.; James, M. R.; Hutchison, W.; Arámbula, R.; Reyes, G.

2013-05-01

In January 2013 eruptions resumed at Volcán de Colima, the previous activity having ceased in June 2011. This period represented the quietest the volcano has been since before the previous episode commenced in 1998. The new eruptive episode is showing differences compared to the 1998-2011 period, which are presenting a challenge to interpret. Lower gases fluxes coupled with lower fumaroles temperatures are consistent with the decreasing trend of volatile-contents but the two larger Vulcanian eruptions in January produced pyroclastic density currents with a greater degree of fragmentation than previous events. A dome has been growing within the newly formed crater within the previous dome. The 1998-2011 eruption included five periods of effusive activity, with little variation in composition. Domes grew with effusion rates covering more than 2 orders of magnitude. Both explosive and effusive activity was centred at multiple locations within the summit crater. The SO2 flux showed a general declining trend throughout this period and 2005 included the largest pyroclastic flows witnessed since the last Plinian eruption in 1913. Swarms of small amplitude long period events were detected prior to each larger eruption, these have been again witnessed in 2013. The characteristics of the swarms is being compared, the generation of events being related to brittle fracturing along the conduit margin. The episode terminated in June 2011 with an explosion which removed the upper portion of the most recent and extended period of dome growth, which was at a very slow rate from January 2007. Automated 3D computer vision reconstruction techniques (structure-from-motion and multi-view stereo, SfM-MVS) have permitted the estimation of dome volumes from 1 m resolution digital elevation models. A small decrease in volume (0.4×105 m3) was detected prior to the explosion, which was related to the formation of steps in the dome surface, related to localized zones of weakness. For the explosion, the region of greatest volume loss was observed to be not coincident with the assumed location of the conduit, suggesting and that heterogeneity within the dome was important during the June explosion. Analysis of thermal images taken during flights has permitted the detailed modelling of the dome emplacement processes. The onset of rockfalls on the W side once it reached the crater rim provoked a change in emplacement style from endogenic to exogenic. Monitoring the activity during the recent eruption has produced a wealth of data making it an excellent case study for modelling transitions between different regimes and the generating mechanism for Vulcanian explosions.

MICROCOMPUTED TOMOGRAPHIC, MORPHOMETRIC, AND HISTOPATHOLOGIC ASSESSMENT OF CONGENITAL BONE MALFORMATIONS IN TWO NEOTROPICAL VIPERIDS.

PubMed

de Carvalho, Marcelo Pires Nogueira; Sant'Anna, Sávio Stefanini; Grego, Kathleen Fernandes; de Campos Fonseca-Pinto, Ana Carolina Brandão; Lorigados, Carla Aparecida Batista; Queiroz-Hazarbassanov, Nicolle Gilda Teixeira; Catão-Dias, José Luiz

2017-10-01

Congenital malformations have been reported in all classes of vertebrates and may be a determinant of life span and survival. In reptiles, the incidence of congenital malformations can be associated with genetic and environmental causes, including pollution. The characterization of pathological processes involved in the development of congenital malformations of bone in snakes is rare in the literature, but is of great relevance in the field of reptile conservation and environmental health. We describe congenital bone lesions in 50 newborn jararaca (Bothrops jararaca) and 26 South American rattlesnakes (Crotalus durissus terrificus) born from wild-caught pregnant females in Southeastern Brazil. Lesions were evaluated by morphometric quantitative analysis, x-ray microtomography, and histopathologic descriptive analysis. Morphometric analysis showed that jararaca presented more severe axial lesions (kyphosis, scoliosis, and kyphoscoliosis) than rattlesnakes. Female rattlesnakes presented more severe axial lesions than did males. In rattlesnakes, spinal deformities were more frequently diagnosed in the caudal segment of the body. We present x-ray microtomographic assessments and images of malformed snakes (n=9) and characterized novel malformations, such as the agenesis of frontal, parietal, and supraoccipital bones in a jararaca specimen. Histopathologic findings included vertebral body fusion, myositis, coagulation necrosis, and disorganization of periaxial muscle fibers. The new methods and results presented in this study will be useful and informative for future research in pathology, teratology, embryology, and ecotoxicology in snakes.

Morphometric study of third-instar larvae from five morphotypes of the Anastrepha fraterculus cryptic species complex (Diptera, Tephritidae)

PubMed Central

Canal, Nelson A.; Hernández-Ortiz, Vicente; Salas, Juan O. Tigrero; Selivon, Denise

2015-01-01

Abstract The occurrence of cryptic species among economically important fruit flies strongly affects the development of management tactics for these pests. Tools for studying cryptic species not only facilitate evolutionary and systematic studies, but they also provide support for fruit fly management and quarantine activities. Previous studies have shown that the South American fruit fly, Anastrepha fraterculus, is a complex of cryptic species, but few studies have been performed on the morphology of its immature stages. An analysis of mandible shape and linear morphometric variability was applied to third-instar larvae of five morphotypes of the Anastrepha fraterculus complex: Mexican, Andean, Ecuadorian, Peruvian and Brazilian-1. Outline geometric morphometry was used to study the mouth hook shape and linear morphometry analysis was performed using 24 linear measurements of the body, cephalopharyngeal skeleton, mouth hook and hypopharyngeal sclerite. Different morphotypes were grouped accurately using canonical discriminant analyses of both the geometric and linear morphometry. The shape of the mandible differed among the morphotypes, and the anterior spiracle length, number of tubules of the anterior spiracle, length and height of the mouth hook and length of the cephalopharyngeal skeleton were the most significant variables in the linear morphometric analysis. Third-instar larvae provide useful characters for studies of cryptic species in the Anastrepha fraterculus complex. PMID:26798253

Insights into subglacial eruptions based on geomorphometry: Broad scale analysis of subglacial edifices in Iceland

NASA Astrophysics Data System (ADS)

Pedersen, Gro; Grosse, Pablo

2014-05-01

The two main types of subglacial volcanic edifices, tuyas and tindars, have classicaly been known for their distinct morphometric characteristics. Tuyas are roughly equidimensional, steep-sided, flat topped mountains, while tindars are elongate, linear, steep sided, serrated ridges. In particular, the passage zone is morphometrically diagnostic, with a break in slope marking the transition from steep scree flanks to a low sloping lava cap [e.g. 1]. The passage zone thereby records the englacial water level coeval with delta formation and thereby provides important paleoenvironmental parameters regarding ice thickness, paleo-ice surface and the eruption environment. This study utilizes these morphometric characteristics to make a broad scale assessment of Icelandic subglacial edifices in the neovolcanic zone based on the TK-50 digital elevation model (20m/pixel) from the company Loftmyndir ehf. The edifice boundaries are delimited by concave breaks in slope around their bases and the passage zones are extracted as convex breaks in slope. This extraction is performed through object-based image analysis of slope and profile curvature maps with the eCognition program [2]. The MORVOLC code [3] is then used to calculate several morphometric parameters for each edifice: volume, edifice height, passage zone height, slope, base area, base width, ellipticity and irregularity. Analysis of the morphometric parameters allows grouping of subglacial edifices by to volume, with a continuum of landforms ranging from small tindars (group 1) to large tuyas (group 3), with an intermediate complex group of edifices (group 2). The plan shape indexes (ellipticity and irregularity) and the strike of main elongation show a first order correlation with the 3 classes and groups. Furthermore, correlations of passage zone heights, volumes and information regarding englacial lake stability allows us to investigate several aspects of tuya formation, including(1) spatial distribution of tuya sizes in rift and plume dominated volcanic systems, (2) estimation of paleo-ice surface height based on passage zone elevation, and (3) correlation between eruption size, approximate paleo-ice surface height and meltwater drainage. This study shows how a new semi-automated geomorphometric analysis of subglacial volcanic morphologies can provide information on the eruption environment. Furthermore, the technique can be used for submarine and planetary volcanic environments given a sufficiently accurate topographic model, providing a consistent approach to compare volcanic edifices in different environments. [1] Jones (1969) Quarterly Journal of the Geological Society 124, 197-211. [2] Benz et al. (2004) ISPRS Journal of photogrammetry & remote sensing 58, 239-258. [3] Grosse et al. (2012) Geomorphology 136, 114-131.

Rebuilding Mount St. Helens

USGS Publications Warehouse

Schilling, Steve P.; Ramsey, David W.; Messerich, James A.; Thompson, Ren A.

2006-01-01

On May 18, 1980, Mount St. Helens, Washington exploded in a spectacular and devastating eruption that shocked the world. The eruption, one of the most powerful in the history of the United States, removed 2.7 cubic kilometers of rock from the volcano's edifice, the bulk of which had been constructed by nearly 4,000 years of lava-dome-building eruptions. In seconds, the mountain's summit elevation was lowered from 2,950 meters to 2,549 meters, leaving a north-facing, horseshoe-shaped crater over 2 kilometers wide. Following the 1980 eruption, Mount St. Helens remained active. A large lava dome began episodically extruding in the center of the volcano's empty crater. This dome-building eruption lasted until 1986 and added about 80 million cubic meters of rock to the volcano. During the two decades following the May 18, 1980 eruption, Crater Glacier formed tongues of ice around the east and west sides of the lava dome in the deeply shaded niche between the lava dome and the south crater wall. Long the most active volcano in the Cascade Range with a complex 300,000-year history, Mount St. Helens erupted again in the fall of 2004 as a new period of dome building began within the 1980 crater. Between October 2004 and February 2006, about 80 million cubic meters of dacite lava erupted immediately south of the 1980-86 lava dome. The erupting lava separated the glacier into two parts, first squeezing the east arm of the glacier against the east crater wall and then causing equally spectacular crevassing and broad uplift of the glacier's west arm. Vertical aerial photographs document dome growth and glacier deformation. These photographs enabled photogrammetric construction of a series of high-resolution digital elevation models (DEMs) showing changes from October 4, 2004 to February 9, 2006. From the DEMs, Geographic Information Systems (GIS) applications were used to estimate extruded volumes and growth rates of the new lava dome. The DEMs were also used to quantify dome height variations, size of the magma conduit opening, and the mechanics of dome emplacement. Previous lava-dome-building eruptions at the volcano have persisted intermittently for years to decades. Over time, such events constructed much of the cone-shaped mountain seen prior to the May 18, 1980 eruption. Someday, episodic dome growth may eventually rebuild Mount St. Helens to its pre-1980 form.

Microfracture development and foam collapse during lava dome growth

NASA Astrophysics Data System (ADS)

Ashwell, P.; Kendrick, J. E.; Lavallee, Y.; kennedy, B.; Hess, K.; Cole, J. W.; Dingwell, D. B.

2012-12-01

The ability of a volcano to degas effectively is regulated by the collapse of the foam during lava dome growth. As a lava dome extrudes and cools, it will begin to collapse under its own weight, leading to the closure of bubbles and the eventual blockage of the permeable foam network. A reduction in the lavas permeability hinders gas movement and increases internal bubble pressure, which may eventually lead to failure of the bubble walls, and ultimately to explosive fragmentation of the dome. However, the behaviour of lava dome material under compression is poorly understood. Here we present the results of low-load, uniaxial, high temperature (850oC) compression experiments on glassy, rhyolitic dome material from Ngongotaha (~200ka, following collapse of Rotorua Caldera) and Tarawera (1314AD, from dome collapse generated block and ash flow) domes in New Zealand. The development of textures and microstructures was tracked using neutron computed tomography at incremental stages of strain. Porosity and permeability measurements, using pycnometry and gas permeability, before and after each experiment quantified the evolution of the permeable bubble network. Our results show that uniaxial compression of vesicular lava leads to a systematic reduction of porosity on a timescale comparable to volcanic eruptions (hours - days). The closure of bubbles naturally decreases permeability parallel and perpendicular to the applied load, and at high strains fractures begin to initiate in phenocrysts and propagate vertically into the glass. These microfractures result in localised increases in permeability. Crystallinity and initial vesicularity of each sample affects the rate of bubble collapse and the evolution of permeability. The most highly compressed samples (60%) show textures similar to samples collected from the centre of Tarawera Dome, thought to have suffered from collapse shortly after dome emplacement. However, structures and porosities in the deformed Ngongotaha samples differ from the natural collapsed dome material. The interior of Ngongotaha Dome shows complex deformed flow banding, indicating that shearing during emplacement was a major component during collapse of the permeable foam. Understanding the development of the porous permeable network during lava dome growth is key to predicting the behaviour of an erupting volcano, and the assessing the likelihood of pressure build-up leading to a catastrophic explosive eruption.

Surveillance of Space Concept Demonstrator. Presentation of One Sensor: CASTOR-V

DTIC Science & Technology

2007-04-01

30ºC to minimize the significant dark count (noise) gradient, and that the highest binning mode that will not incur resolution loss must be selected...38 5.1.4 Dome issue 3: Shutter malfunctioning...Dome motor and its controller used to rotate the observatory dome of CASTOR-V10 Figure 8. Dome shutter and wind screen motors and the controller

Blue Mountain and The Gas Rocks: Rear-Arc Dome Clusters on the Alaska Peninsula

USGS Publications Warehouse

Hildreth, Wes; Fierstein, Judy; Calvert, Andrew T.

2007-01-01

Behind the single-file chain of stratovolcanoes on the Alaska Peninsula, independent rear-arc vents for mafic magmas are uncommon, and for silicic magmas rarer still. We report here the characteristics, compositions, and ages of two andesite-dacite dome clusters and of several nearby basaltic units, all near Becharof Lake and 15 to 20 km behind the volcanic front. Blue Mountain consists of 13 domes (58-68 weight percent SiO2) and The Gas Rocks of three domes (62-64.5 weight percent SiO2) and a mafic cone (52 weight percent SiO2). All 16 domes are amphibole-biotite-plagioclase felsite, and nearly all are phenocryst rich and quartz bearing. Although the two dome clusters are lithologically and chemically similar and only 25 km apart, they differ strikingly in age. The main central dome of Blue Mountain yields an 40Ar/39Ar age of 632?7 ka, and two of the Gas Rocks domes ages of 25.7?1.4 and 23.3?1.2 ka. Both clusters were severely eroded by glaciation; surviving volumes of Blue Mountain domes total ~1 km3, and of the Gas Rocks domes 0.035 km3. Three basaltic vents lie close to The Gas Rocks, another lies just south of Blue Mountain, and a fifth is near the north shore of Becharof Lake. A basaltic andesite vent 6 km southeast of The Gas Rocks appears to be a flank vent of the arc-front center Mount Peulik. The basalt of Ukinrek Maars has been called transitionally alkalic, but all the other basaltic rocks are subalkaline. CO2-rich gas emissions near the eponymous Gas Rocks domes are not related to the 25-ka dacite dome cluster but, rather, to intracrustal degassing of intrusive basalt, one batch of which erupted 3 km away in 1977. The felsic and mafic vents all lie along or near the Bruin Bay Fault where it intersects a broad transverse structural zone marked by topographic, volcanologic, and geophysical discontinuities.

Sex determination from the frontal bone: a geometric morphometric study.

PubMed

Perlaza, Néstor A

2014-09-01

Sex estimation in human skeletal remains when using the cranium through traditional methods is a fundamental pillar in human identification; however, it may be possible to incur in a margin of error due because of the state of preservation in incomplete or fragmented remains. The aim of this investigation was sex estimation through the geometric morphometric analysis of the frontal bone. The sample employed 60 lateral radiographs of adult subjects of both sexes (30 males and 30 females), aged between 18 and 40 years, with mean age for males of 28 ± 4 and 30 ± 6 years for females. Thin-plate splines evidenced strong expansion of the glabellar region in males and contraction in females. No significant differences were found between sexes with respect to size. The findings suggest differences in shape and size in the glabellar region, besides reaffirming the use of geometric morphometrics as a quantitative method in sex estimation. © 2014 American Academy of Forensic Sciences.

Scaling mimesis: Morphometric and ecomorphological similarities in three sympatric plant-mimetic fish of the family Carangidae (Teleostei)

PubMed Central

de Queiroz, Alexya Cunha; Vallinoto, Marcelo; Sakai, Yoichi; Giarrizzo, Tommaso

2018-01-01

The mimetic juveniles of a number of carangid fish species resemble plant parts floating near the water surface, such as leaves, seeds and other plant debris. The present study is the first to verify the morphological similarities and ecomorphological relationships between three carangids (Oligoplites saurus, Oligoplites palometa and Trachinotus falcatus) and their associated plant models. Behavioral observations were conducted in the estuary of Curuçá River, in northeastern Pará (Brazil) between August 2015 and July 2016. Individual fishes and associated floating objects (models) were sampled for comparative analysis using both geometric and morphometric approaches. While the mimetic fish and their models retain their own distinct, intrinsic morphological features, a high degree of morphological similarity was found between each fish species and its model. The morphometric analyses revealed a general tendency of isometric development in all three fish species, probably related to their pelagic habitats, during all ontogenetic stages. PMID:29558476

Morphometric Variation on the Cypress Aphid Cinara cupressi (Buckton) (Hemiptera: Aphididae) Associated to Urban Trees.

PubMed

Ruiz, C; Lanfranco, D; Carrillo, R; Parra, L

2014-06-01

Cinara cupressi (Buckton) is an important aphid pest of the Cupressaceae family, originally reported in Chile in 2003. Since then, it has spread over 4,000 km, contributing to conservation issues, mostly associated with native and urban trees of the Cupressaceae. In the present work, the morphometric variation of C. cupressi was examined to determine if the species present in Chile corresponds to a specific entity, and to identify variations among specimens from different localities in the study area. Colonies were collected from urban trees from northern, central, and southern Chile. Morphometric data for 14 characters in aphids from 63 localities in all the distribution ranges were measured and analyzed by multivariate analysis. Results showed that the species present in Chile corresponds to C. cupressi like a single specific entity, showing no morphological variation across the regions sampled. Our data will be discussed within the context of correct taxonomic identification for the implementation of effective biological control strategies.

Longitudinal Biases in the Seychelles Dome Simulated by 34 Ocean-Atmosphere Coupled General Circulation Models

NASA Astrophysics Data System (ADS)

Nagura, M.; Sasaki, W.; Tozuka, T.; Luo, J.; Behera, S. K.; Yamagata, T.

2012-12-01

The upwelling dome of the southern tropical Indian Ocean is examined by using simulated results from 34 ocean-atmosphere coupled general circulation models (CGCMs) including those from the phase five of the Coupled Model Intercomparison Project (CMIP5). Among the current set of the 34 CGCMs, 12 models erroneously produce the upwelling dome in the eastern half of the basin while the observed Seychelles Dome is located in the southwestern tropical Indian Ocean (Figure 1). The annual mean Ekman pumping velocity is almost zero in the southern off-equatorial region in these models. This is in contrast with the observations that show Ekman upwelling as the cause of the Seychelles Dome. In the models that produce the dome in the eastern basin, the easterly biases are prominent along the equator in boreal summer and fall that cause shallow thermocline biases along the Java and Sumatra coasts via Kelvin wave dynamics and result in a spurious upwelling dome there. In addition, these models tend to overestimate (underestimate) the magnitude of annual (semiannual) cycle of thermocline depth variability in the dome region, which is another consequence of the easterly wind biases in boreal summer-fall. Compared to the CMIP3 models (Yokoi et al. 2009), the CMIP5 models are even worse in simulating the dome longitudes and magnitudes of annual and semiannual cycles of thermocline depth variability in the dome region. Considering the increasing need to understand regional impacts of climate modes, these results may give serious caveats to interpretation of model results and help in further model developments.; Figure 1: The longitudes of the shallowest annual-mean D20 in 5°S-12°S. The open and filled circles are for the observations and the CGCMs, respectively.

Formation of dome and basin structures: Results from scaled experiments using non-linear rock analogues

NASA Astrophysics Data System (ADS)

Zulauf, J.; Zulauf, G.; Zanella, F.

2016-09-01

Dome and basin folds are structures with circular or slightly elongate outcrop patterns, which can form during single- and polyphase deformation in various tectonic settings. We used power-law viscous rock analogues to simulate single-phase dome-and-basin folding of rocks undergoing dislocation creep. The viscosity ratio between a single competent layer and incompetent matrix was 5, and the stress exponent of both materials was 7. The samples underwent layer-parallel shortening under bulk pure constriction. Increasing initial layer thickness resulted in a decrease in the number of domes and basins and an increase in amplitude, A, arc-length, L, wavelength, λ, and layer thickness, Hf. Samples deformed incrementally show progressive development of domes and basins until a strain of eY=Z = -30% is attained. During the dome-and-basin formation the layer thickened permanently, while A, L, and λ increased. A dominant wavelength was not attained. The normalized amplitude (A/λ) increased almost linearly reaching a maximum of 0.12 at eY=Z = -30%. During the last increment of shortening (eY=Z = -30 to -40%) the domes and basins did not further grow, but were overprinted by a second generation of non-cylindrical folds. Most of the geometrical parameters of the previously formed domes and basins behaved stable or decreased during this phase. The normalized arc-length (L/Hf) of domes and basins is significantly higher than that of 2D cylindrical folds. For this reason, the normalized arc length can probably be used to identify domes and basins in the field, even if these structures are not fully exposed in 3D.

Analysis of the Effects of Thermal Environment on Optical Systems for Navigation Guidance and Control in Supersonic Aircraft Based on Empirical Equations

PubMed Central

Cheng, Xuemin; Yang, Yikang; Hao, Qun

2016-01-01

The thermal environment is an important factor in the design of optical systems. This study investigated the thermal analysis technology of optical systems for navigation guidance and control in supersonic aircraft by developing empirical equations for the front temperature gradient and rear thermal diffusion distance, and for basic factors such as flying parameters and the structure of the optical system. Finite element analysis (FEA) was used to study the relationship between flying and front dome parameters and the system temperature field. Systematic deduction was then conducted based on the effects of the temperature field on the physical geometry and ray tracing performance of the front dome and rear optical lenses, by deriving the relational expressions between the system temperature field and the spot size and positioning precision of the rear optical lens. The optical systems used for navigation guidance and control in supersonic aircraft when the flight speed is in the range of 1–5 Ma were analysed using the derived equations. Using this new method it was possible to control the precision within 10% when considering the light spot received by the four-quadrant detector, and computation time was reduced compared with the traditional method of separately analysing the temperature field of the front dome and rear optical lens using FEA. Thus, the method can effectively increase the efficiency of parameter analysis and computation in an airborne optical system, facilitating the systematic, effective and integrated thermal analysis of airborne optical systems for navigation guidance and control. PMID:27763515

Analysis of the Effects of Thermal Environment on Optical Systems for Navigation Guidance and Control in Supersonic Aircraft Based on Empirical Equations.

PubMed

Cheng, Xuemin; Yang, Yikang; Hao, Qun

2016-10-17

The thermal environment is an important factor in the design of optical systems. This study investigated the thermal analysis technology of optical systems for navigation guidance and control in supersonic aircraft by developing empirical equations for the front temperature gradient and rear thermal diffusion distance, and for basic factors such as flying parameters and the structure of the optical system. Finite element analysis (FEA) was used to study the relationship between flying and front dome parameters and the system temperature field. Systematic deduction was then conducted based on the effects of the temperature field on the physical geometry and ray tracing performance of the front dome and rear optical lenses, by deriving the relational expressions between the system temperature field and the spot size and positioning precision of the rear optical lens. The optical systems used for navigation guidance and control in supersonic aircraft when the flight speed is in the range of 1-5 Ma were analysed using the derived equations. Using this new method it was possible to control the precision within 10% when considering the light spot received by the four-quadrant detector, and computation time was reduced compared with the traditional method of separately analysing the temperature field of the front dome and rear optical lens using FEA. Thus, the method can effectively increase the efficiency of parameter analysis and computation in an airborne optical system, facilitating the systematic, effective and integrated thermal analysis of airborne optical systems for navigation guidance and control.

Morphometric analysis of cisplatin-induced neurite outgrowth in N1E-115 neuroblastoma cells.

PubMed

Konings, P N; Philipsen, R L; van den Broek, J H; Ruigt, G S

1994-08-29

Cisplatin, a widely used cytostatic drug for the control of a variety of neoplastic tumors, unexpectedly induced neurite outgrowth in N1E-115 neuroblastoma cells and this phenomenon was studied further in detail with morphometric analysis. As expected, cisplatin dose-dependently reduced cell number. At the same time, however, cisplatin affected the morphology of the neuroblastoma cells that changed from small rounded cell bodies into large flat cell bodies with neurites. The neurite length/cell as a function of cisplatin concentration showed a bell-shaped curve. The maximal effect (1200% of control) on neurite length/cell was observed at 1 microgram/ml cisplatin. In conclusion, cisplatin induced cellular differentiation in N1E-115 neuroblastoma cells at and just above threshold doses for cytostatic activity.

Choice matters: incipient speciation in Gyrodactylus corydori (Monogenoidea: Gyrodactylidae).

PubMed

Bueno-Silva, Marlus; Boeger, Walter A; Pie, Marcio R

2011-05-01

We investigated how Gyrodactylus corydoriBueno-Silva and Boeger, 2009 exploits two sympatric host species, Corydoras paleatus (Jenyns, 1842) and Corydoras ehrhardti Steindachner, 1910. Specimens of G. corydori were collected from the Piraquara and Miringuava Rivers, State of Paraná, Brazil, between 2005 and 2006. A total of 167 parasites was measured from both host species. Nine morphometric features of the haptoral sclerites were measured and analyzed by discriminant analysis, cluster analysis and multivariate analysis of variance. A fragment of the mitochondrial cytochrome oxidase I gene (COI) (∼740 bp) and the rDNA internal transcribed spacers (ITS) (∼1200 bp) of G. corydori were sequenced. Bayesian and parsimony analyses of COI recognized two genetically structured clades of G. corydori, which corresponded closely with the two species of Corydoras. Twenty-eight haplotypes were detected (18 were exclusive to C. ehrhardti and seven were exclusive to C. paleatus). The same general pattern between parasites and host species was observed in the morphometric analyses. Nevertheless, poor correlation of genetic and morphometric variation strongly supports the plastic nature of the morphological variation of haptoral sclerites. The existence of two clades with limited gene flow would suggest that G. corydori already represents two cryptic species. However, the morphometric and molecular data showed that there is insufficient evidence to support two valid species. The low COI (0.1-6.2%) and ITS (0.09-3.5%) divergence within G. corydori suggest a recent separation of the lineages between distinct host species (less than 1 million years). As the hypothesis of secondary contact of the parasite demographic history was rejected, our results point to the possibility of sympatric incipient ongoing speciation of G. corydori to form distinct parasite lineages adapted to C. ehrhardti and C. paleatus. This may be a common event within the Gyrodactylidae, adding a yet unreported mode of adaptive speciation that helps to understand its rate of diversification. Copyright © 2011 Australian Society for Parasitology Inc. Published by Elsevier Ltd. All rights reserved.

Analysis of the variation in low-level laser energy density on the crushed sciatic nerves of rats: a morphological, quantitative, and morphometric study.

PubMed

Ziago, Eduardo Keiske Mastuda; Fazan, Valéria Paula Sassoli; Iyomasa, Mamie Mizusaki; Sousa, Luiz Gustavo; Yamauchi, Paula Yumi; da Silva, Eunice Aparecida; Borie, Eduardo; Fuentes, Ramón; Dias, Fernando José

2017-02-01

The objective of this study was to evaluate three energy densities of low-level laser therapy (LLLT, GaAlAs, 780 nm, 40 mW, 0.04 cm 2 ) for the treatment of lesions to peripheral nerves using the sciatic nerve of rats injured via crushing model (15 kgf, 5.2 MPa). Thirty Wistar rats (♂, 200-250 g) were divided into five groups (n = 6): C-control, not injured, and irradiated; L0-injured nerve without irradiation; L4-injured nerve irradiated with LLLT 4 J/cm 2 (0.16 J); L10-injured nerve irradiated with LLLT 10 J/cm 2 (0.4 J); and L50-injured nerve irradiated with LLLT 50 J/cm 2 (2 J). The animals were sacrificed 2 weeks after the injury via perfusion with glutaraldehyde (2.5%, 0.1 M sodium cacodylate buffer). The nerve tissue was embedded in historesin, cut (3 μm), mounted on slides, and stained (Sudan black and neutral red). The morphological and quantitative analysis (myelin and blood capillary densities) and morphometric parameters (maximum and minimum diameters of nerve fibers, axon diameter, G-ratio, myelin sheath thickness) were assessed using the ImageJ software. ANOVA (parametric) or Kruskal-Wallis (nonparametric) tests were used for the statistical analysis. Groups L0, L4, L10, and L50 exhibited diminished values of all the quantitative and morphometric parameters in comparison to the control group. The morphological, quantitative, and morphometric data revealed improvement after injury in groups L4, L10, and L50 (irradiated groups) compared to the injured-only group (L0); the best results, in general, were observed for the L10 group after 15 days of nerve injury.

Seismicity associated with dome growth and collapse at the Soufriere Hills Volcano, Montserrat

USGS Publications Warehouse

Miller, A.D.; Stewart, R.C.; White, R.A.; Luckett, R.; Baptie, B.J.; Aspinall, W.P.; Latchman, J.L.; Lynch, L.L.; Voight, B.

1998-01-01

Varied seismicity has accompanied growth and collapse of the lava dome of the Soufriere Hills Volcano, Montserrat. Earthquakes have been classified as either volcano-tectonic, long-period or hybrid, and daily variations in the numbers of events have mapped changes in the style of eruption. Repetitive hybrid earthquakes were common during the first months of dome growth. In July 1996 the style of seismicity changed and regular short-lived hybrid earthquake swarms became common. This change was probably caused by an increase in the magma flux. Earthquake swarms have preceded almost all major dome collapses, and have accompanied cyclical deformation, thought to be due to a built-up of pressure in the upper conduit which is later released by magma moving into the dome.Varied seismicity has accompanied growth and collapse of the lava dome of the Soufriere Hills Volcano, Montserrat. Earthquakes have been classified as either volcano-tectonic, long-period or hybrid, and daily variations in the numbers of events have mapped changes in the style of eruption. Repetitive hybrid earthquakes were common during the first months of dome growth. In July 1996 the style of seismicity changed and regular, short-lived hybrid earthquake swarms became common. This change was probably caused by an increase in the magma flux. Earthquake swarms have preceded almost all major dome collapses, and have accompanied cyclical deformation, thought to be due to a build-up of pressure in the upper conduit which is later released by magma moving into the dome.

Morphodynamics of dome dunes under unimodal wind regimes

NASA Astrophysics Data System (ADS)

Gao, Xin; Narteau, Clement; Rozier, Olivier

2017-04-01

Dome dunes are isolated sand piles with a rounded shape and no slip face. They are not only incipient or disappearing dunes, they can also reach a giant size and form dome-dune fields. Nevertheless, unlike other types of dunes, they have not been the subject of intense research, certainly because they result from complex multidirectional wind regimes. Here we analyze the morphodynamics of dome dunes under unimodal wind regimes. From numerical modeling using a normal distribution of sand flux orientation, we show that the transition from barchan to dome dunes occur when the standard deviation is larger than 40°. As confirmed by sand flux roses of dome-dune fields in arid deserts on Earth, it corresponds to RDP/DP-value of 0.8 (RDP/DP is the ratio between the resultant drift potential and the drift potential). Both in the field and in the numerical model, the transition from barchan to dome-dunes can also be captured from the coefficient of variation of the planar dune shape. Not surprisingly, smaller dome dunes are faster than larger ones. However, the dependence of dune migration rate on the RDP-value changes according to the presence or absence of slip faces because of the speed-up effect. Transient finger dunes may develop in dome-dune fields, but they rapidly break-up into smaller bodies. This shows that, contrary to bidirectional wind regimes, a large dispersion of sand flux orientation is not efficient in building longitudinal dunes.

Procrustes-based geometric morphometrics on MRI images: An example of inter-operator bias in 3D landmarks and its impact on big datasets.

PubMed

Daboul, Amro; Ivanovska, Tatyana; Bülow, Robin; Biffar, Reiner; Cardini, Andrea

2018-01-01

Using 3D anatomical landmarks from adult human head MRIs, we assessed the magnitude of inter-operator differences in Procrustes-based geometric morphometric analyses. An in depth analysis of both absolute and relative error was performed in a subsample of individuals with replicated digitization by three different operators. The effect of inter-operator differences was also explored in a large sample of more than 900 individuals. Although absolute error was not unusual for MRI measurements, including bone landmarks, shape was particularly affected by differences among operators, with up to more than 30% of sample variation accounted for by this type of error. The magnitude of the bias was such that it dominated the main pattern of bone and total (all landmarks included) shape variation, largely surpassing the effect of sex differences between hundreds of men and women. In contrast, however, we found higher reproducibility in soft-tissue nasal landmarks, despite relatively larger errors in estimates of nasal size. Our study exemplifies the assessment of measurement error using geometric morphometrics on landmarks from MRIs and stresses the importance of relating it to total sample variance within the specific methodological framework being used. In summary, precise landmarks may not necessarily imply negligible errors, especially in shape data; indeed, size and shape may be differentially impacted by measurement error and different types of landmarks may have relatively larger or smaller errors. Importantly, and consistently with other recent studies using geometric morphometrics on digital images (which, however, were not specific to MRI data), this study showed that inter-operator biases can be a major source of error in the analysis of large samples, as those that are becoming increasingly common in the 'era of big data'.

Procrustes-based geometric morphometrics on MRI images: An example of inter-operator bias in 3D landmarks and its impact on big datasets

PubMed Central

Ivanovska, Tatyana; Bülow, Robin; Biffar, Reiner; Cardini, Andrea

2018-01-01

Using 3D anatomical landmarks from adult human head MRIs, we assessed the magnitude of inter-operator differences in Procrustes-based geometric morphometric analyses. An in depth analysis of both absolute and relative error was performed in a subsample of individuals with replicated digitization by three different operators. The effect of inter-operator differences was also explored in a large sample of more than 900 individuals. Although absolute error was not unusual for MRI measurements, including bone landmarks, shape was particularly affected by differences among operators, with up to more than 30% of sample variation accounted for by this type of error. The magnitude of the bias was such that it dominated the main pattern of bone and total (all landmarks included) shape variation, largely surpassing the effect of sex differences between hundreds of men and women. In contrast, however, we found higher reproducibility in soft-tissue nasal landmarks, despite relatively larger errors in estimates of nasal size. Our study exemplifies the assessment of measurement error using geometric morphometrics on landmarks from MRIs and stresses the importance of relating it to total sample variance within the specific methodological framework being used. In summary, precise landmarks may not necessarily imply negligible errors, especially in shape data; indeed, size and shape may be differentially impacted by measurement error and different types of landmarks may have relatively larger or smaller errors. Importantly, and consistently with other recent studies using geometric morphometrics on digital images (which, however, were not specific to MRI data), this study showed that inter-operator biases can be a major source of error in the analysis of large samples, as those that are becoming increasingly common in the 'era of big data'. PMID:29787586

High prevalence of morphometric vertebral deformities in patients with inflammatory bowel disease.

PubMed

Heijckmann, Anna Caroline; Huijberts, Maya S P; Schoon, Erik J; Geusens, Piet; de Vries, Jolanda; Menheere, Paul P C A; van der Veer, Eveline; Wolffenbuttel, Bruce H R; Stockbrugger, Reinhold W; Dumitrescu, Bianca; Nieuwenhuijzen Kruseman, Arie C

2008-08-01

Earlier studies have documented that the prevalence of decreased bone mineral density (BMD) is elevated in patients with inflammatory bowel disease. The objective of this study was to investigate the prevalence of vertebral deformities in inflammatory bowel disease patients and their relation with BMD and bone turnover. One hundred and nine patients with Crohn's disease (CD) and 72 with ulcerative colitis (UC) (age 44.5+/-14.2 years) were studied. BMD of the hip (by dual X-ray absorptiometry) was measured and a lateral single energy densitometry of the spine for assessment of vertebral deformities was performed. Serum markers of bone resorption (carboxy-terminal cross-linked telopeptide of type I collagen) and formation (procollagen type I amino-terminal propeptide) were measured, and determinants of prevalent vertebral deformities were assessed using logistic regression analysis. Vertebral deformities were found in 25% of both CD and UC patients. Comparing patients with and without vertebral deformities, no significant difference was found between Z-scores and T-scores of BMD, or levels of serum carboxy-terminal cross-linked telopeptide of type I collagen and serum procollagen type I amino-terminal propeptide. Using logistic regression analysis the only determinant of any morphometric vertebral deformity was sex. The presence of multiple vertebral deformities was associated with older age and glucocorticoid use. The prevalence of morphometric vertebral deformities is high in CD and UC. Male sex, but neither disease activity, bone turnover markers, clinical risk factors, nor BMD predicted their presence. The determinants for having more than one vertebral deformity were age and glucocorticoid use. This implies that in addition to screening for low BMD, morphometric assessment of vertebral deformities is warranted in CD and UC.

Dome Degradation Characterization of Wide-Field-of-View Nonscanner Aboard ERBE and Its Reprocessing

NASA Technical Reports Server (NTRS)

Shrestha, Alok K.; Kato, Seiji; Wong, Takmeng; Su, Wenying; Stackhouse, Paul W., Jr.; Rose, Fred; Miller, Walter F.; Bush, Kathryn; Rutan, David A.; Minnis, Patrick;

The role of frictional contact of constituent blocks on the stability of masonry domes.

PubMed

Beatini, Valentina; Royer-Carfagni, Gianni; Tasora, Alessandro

2018-01-01

The observation of old construction works confirms that masonry domes can withstand tensile hoop stresses, at least up to a certain level. Here, such tensile resistance, rather than a priori assumed as a property of the bulk material, is attributed to the contact forces that are developed at the interfaces between interlocked blocks under normal pressure, specified by Coulomb's friction law. According to this rationale, the aspect ratio of the blocks, as well as the bond pattern, becomes of fundamental importance. To investigate the complex assembly of blocks, supposed rigid, we present a non-smooth contact dynamic analysis, implemented in a custom software based on the Project Chrono C++ framework and complemented with parametric-design interfaces for pre- and post-processing complex geometries. Through this advanced tool, we investigate the role of frictional forces resisting hoop stresses in the stability of domes, either circular or oval, under static and dynamic loading, focusing, in particular, on the structural role played by the underlying drum and the surmounting tiburium .

Unfinished business: the rebirth of the ALPO Lunar Dome Survey

NASA Astrophysics Data System (ADS)

Huddleston, Marvin W.

2004-05-01

The ALPO board of directors approved the revival of the Lunar Dome Survey during their annual board meeting in the summer of 2003. The initial LDS program was conceived by Harry Jamieson in the early 1960's and headed by him when the British Astronomical Assn. (BAA) was invited to join the program, which they did. The joint effort between the ALPO and BAA lunar sections lasted for approximately 14 years, ending officially around 1976 due to a decline in interest. The program was again revived in 1987 under the direction of Jim Phillips and lasted until the mid-1990's. All told, this program has been one of the longest running programs in the history of the Lunar Section of ALPO. The revived program will concentrate on cleaning up the existing catalog, classification and confirmation of the objects contained therein, and analysis of the database created in the process. It is hoped that, as in the past, much of the newly revived Lunar Dome Survey will be an international effort.

Eemian and penultimate transition reflected in the chemical ice core record from Dome C

NASA Astrophysics Data System (ADS)

Bigler, M.; Lambert, F.; Stauffer, B.; Röthlisberger, R.; Wolff, E. W.

2003-04-01

Within the scope of the European Project for Ice Coring in Antarctica (EPICA) chemical analyses have been done along the Dome C ice core. Among other substances, Ca2+, dust, Na+, NH_4{}+, NO_3{}- and electrolytical melt water conductivity have been measured at 1 cm resolution with the Bern Continuous Flow Analysis (CFA) system. Here we present new data from the Eemian and the preceding transition covering an age interval from approximately 180 kyr to 110 kyr before present. This sequence is compared with the Holocene and the last transition, mainly with emphasis on terrestrial and marine tracers. Concentration levels for the two periods compare quite well, but the general shape differs considerably. The changes in dust input to Dome C seemed to have been much more abrupt during the penultimate transition than during the last transition (18 to 15 kyr BP). This may reflect different conditions and/or processes in the dust source region.

Real-Time Measurements of Aft Dome Insulation Erosion on Space Shuttle Reusable Solid Rocket Motor

NASA Technical Reports Server (NTRS)

McWhorter, Bruce; Ewing, Mark; Albrechtsen, Kevin; Noble, Todd; Longaker, Matt

2004-01-01

Real-time erosion of aft dome internal insulation was measured with internal instrumentation on a static test of a lengthened version of the Space Shuffle Reusable Solid Rocket Motor (RSRM). This effort marks the first time that real-time aft dome insulation erosion (Le., erosion due to the combined effects of thermochemical ablation and mechanical abrasion) was measured in this kind of large motor static test [designated as Engineering Test Motor number 3 (ETM3)I. This paper presents data plots of the erosion depth versus time. The data indicates general erosion versus time behavior that is in contrast to what would be expected from earlier analyses. Engineers have long known that the thermal environment in the aft dome is severe and that the resulting aft dome insulation erosion is significant. Models of aft dome erosion involve a two-step process of computational fluid dynamics (CFD) modeling and material ablation modeling. This modeling effort is complex. The time- dependent effects are difficult to verify with only prefire and postfire insulation measurements. Nozzle vectoring, slag accumulation, and changing boundary conditions will affect the time dependence of aft dome erosion. Further study of this data and continued measurements on future motors will increase our understanding of the aft dome flow and erosion environment.

Object-based classification of global undersea topography and geomorphological features from the SRTM30_PLUS data

NASA Astrophysics Data System (ADS)

Dekavalla, Maria; Argialas, Demetre

2017-07-01

The analysis of undersea topography and geomorphological features provides necessary information to related disciplines and many applications. The development of an automated knowledge-based classification approach of undersea topography and geomorphological features is challenging due to their multi-scale nature. The aim of the study is to develop and evaluate an automated knowledge-based OBIA approach to: i) decompose the global undersea topography to multi-scale regions of distinct morphometric properties, and ii) assign the derived regions to characteristic geomorphological features. First, the global undersea topography was decomposed through the SRTM30_PLUS bathymetry data to the so-called morphometric objects of discrete morphometric properties and spatial scales defined by data-driven methods (local variance graphs and nested means) and multi-scale analysis. The derived morphometric objects were combined with additional relative topographic position information computed with a self-adaptive pattern recognition method (geomorphons), and auxiliary data and were assigned to characteristic undersea geomorphological feature classes through a knowledge base, developed from standard definitions. The decomposition of the SRTM30_PLUS data to morphometric objects was considered successful for the requirements of maximizing intra-object and inter-object heterogeneity, based on the near zero values of the Moran's I and the low values of the weighted variance index. The knowledge-based classification approach was tested for its transferability in six case studies of various tectonic settings and achieved the efficient extraction of 11 undersea geomorphological feature classes. The classification results for the six case studies were compared with the digital global seafloor geomorphic features map (GSFM). The 11 undersea feature classes and their producer's accuracies in respect to the GSFM relevant areas were Basin (95%), Continental Shelf (94.9%), Trough (88.4%), Plateau (78.9%), Continental Slope (76.4%), Trench (71.2%), Abyssal Hill (62.9%), Abyssal Plain (62.4%), Ridge (49.8%), Seamount (48.8%) and Continental Rise (25.4%). The knowledge-based OBIA classification approach was considered transferable since the percentages of spatial and thematic agreement between the most of the classified undersea feature classes and the GSFM exhibited low deviations across the six case studies.

Analysis on spectra of hydroacoustic field in sonar cavity of the sandwich elastic wall structure

NASA Astrophysics Data System (ADS)

Xuetao, W.; Rui, H.; Weike, W.

2017-09-01

In this paper, the characteristics of the mechanical self - noise in sonar array cavity are studied by using the elastic flatbed - filled rectangular cavity parameterization model. Firstly, the analytic derivation of the vibration differential equation of the single layer, sandwich elastic wall plate structure and internal fluid coupling is carried out, and the modal method is used to solve it. Finally, the spectral characteristics of the acoustic field of rectangular cavity of different elastic wallboard materials are simulated and analyzed, which provides a theoretical reference for the prediction and control of sonar mechanical self-noise. In this paper, the sandwich board as control inside the dome background noise of a potential means were discussed, the dome background noise of qualitative prediction analysis and control has important theoretical significance.

Linear versus geometric morphometric approaches for the analysis of head shape dimorphism in lizards.

PubMed

Fabre, Anne-Claire; Cornette, Raphäel; Huyghe, Katleen; Andrade, Denis V; Herrel, Anthony

2014-09-01

Differences between the sexes may arise because of differences in reproductive strategy, with females investing more in traits related to reproductive output and males investing more in traits related to resource holding capacity and territory defence. Sexual dimorphism is widespread in lizards and in many species males and females also differ in head shape. Males typically have bigger heads than females resulting in intersexual differences in bite force. Whereas most studies documenting differences in head dimensions between sexes use linear dimensions, the use of geometric morphometrics has been advocated as more appropriate to characterize such differences. This method may allow the characterization of local shape differences that may have functional consequences, and provides unbiased indicators of shape. Here, we explore whether the two approaches provide similar results in an analyses of head shape in Tupinambis merianae. The Argentine black and white tegu differs dramatically in body size, head size, and bite force between the sexes. However, whether the intersexual differences in bite force are simply the result of differences in head size or whether more subtle modifications (e.g., in muscle insertion areas) are involved remains currently unknown. Based on the crania and mandibles of 19 lizards with known bite force, we show intersexual differences in the shape of the cranium and mandible using both linear and geometric morphometric approaches. Although both types of analyses showed generally similar results for the mandible, this was not the case for the cranium. Geometric morphometric approaches provided better insights into the underlying functional relationships between the cranium and the jaw musculature, as illustrated by shape differences in muscle insertion areas not detected using linear morphometric data. © 2014 Wiley Periodicals, Inc.

Effects of Temperature, Photoperiod, and Rainfall on Morphometric Variation of Diaphorina citri (Hemiptera: Liviidae).

PubMed

Paris, Thomson M; Allan, Sandra A; Hall, David G; Hentz, Matthew G; Croxton, Scott D; Ainpudi, Niharika; Stansly, Philip A

2017-02-01

Phenotypic plasticity provides a mechanism by which an organism can adapt to new or changing environments. Earlier studies have demonstrated the variability of Diaphorina citri Kuwayama (Asian citrus psyllid) population dynamics, but no analysis of morphological changes induced by seasonal or artificial laboratory-induced conditions has yet been documented. Such morphometric variation has been found to correspond in dispersal capabilities in several insect taxa. In this study, the effects of temperature and photoperiod on morphometric variation of D. citri were examined through laboratory rearing of psyllids under controlled temperatures (20 °C, 28 °C, and 30 °C) and under a short photoperiod of 10.5:13.5 (L:D) h and a long photoperiod of 16:8 (L:D) h. Diaphorina citri were field-collected monthly from three citrus groves in Fort Pierce, Gainesville, and Immokalee, FL, to evaluate potential field-associated environmental effects. Both traditional and geometric morphometric data were used to analyze the correlation between environmental and morphometric variation. A strong correlation was found between temperature and shape change, with larger and broader wings at colder temperatures in the laboratory. Short day length resulted in shorter and narrower wings as well. From the field, temperature, rainfall, and photoperiod were moderately associated with shape parameters. Adult D. citri with blue/green abdomens collected in the laboratory and field studies were larger in size and shape than those with brown/gray abdomens. Published by Oxford University Press on behalf of Entomological Society of America 2016. This work is written by US Government employees and is in the public domain in the US.

Morphometric traits capture the climatically driven species turnover of 10 spruce taxa across China.

PubMed

Li, He; Wang, GuoHong; Zhang, Yun; Zhang, WeiKang

2016-02-01

This study explored the relative roles of climate and phylogenetic background in driving morphometric trait variation in 10 spruce taxa in China. The study further addressed the hypothesis that these variations are consistent with species turnover on climatic gradients. Nine morphometric traits of leaves, seed cones, and seeds for the 10 studied spruce taxa were measured at 504 sites. These data were analyzed in combination with species DNA sequences from NCBI GenBank. We detected the effects of phylogeny and climate through trait-variation-based K statistics and phylogenetic eigenvector regression (PVR) analyses. Multivariate analyses were performed to detect trait variation along climatic gradients with species replacement. The estimated K-values for the nine studied morphometric traits ranged from 0.19 to 0.68, and the studied environmental variables explained 39-83% of the total trait variation. Trait variation tended to be determined largely by a temperature gradient varying from wet-cool climates to dry-warm summers and, additionally, by a moisture gradient. As the climate became wetter and cooler, spruce species tended to be replaced by other spruces with smaller needle leaves and seeds but larger cones and seed scales. A regression analysis showed that spruce species tended to be successively replaced by other species, along the gradient, although the trends observed within species were not necessarily consistent with the overall trend. The climatically driven replacement of the spruces in question could be well indicated by the between-species variation in morphometric traits that carry lower phylogenetic signal. Between-species variation in these traits is driven primarily by climatic factors. These species demonstrate a narrower ecological amplitude in temperature but wider ranges on the moisture gradient.

Aneurysms of the anterior and posterior cerebral circulation: comparison of the morphometric features.

PubMed

Tykocki, Tomasz; Kostkiewicz, Bogusław

2014-09-01

Intracranial aneurysms (IAs) located in the posterior circulation are considered to have higher annual bleed rates than those in the anterior circulation. The aim of the study was to compare the morphometric factors differentiating between IAs located in the anterior and posterior cerebral circulation. A total number of 254 IAs diagnosed between 2009 and 2012 were retrospectively analyzed. All patients qualified for diagnostic, three-dimensional rotational angiography. IAs were assigned to either the anterior or posterior cerebral circulation subsets for the analysis. Means were compared with a t-test. The univariate and stepwise logistic regression analyses were used to determine the predictors of morphometric differences between the groups. For the defined predictors, ROC (receiver-operating characteristic) curves and interactive dot diagrams were calculated with the cutoff values of the morphometric factors. The number of anterior cerebral circulation IAs was 179 (70.5 %); 141 (55.5 %) aneurysms were ruptured. Significant differences between anterior and posterior circulation IAs were found for: the parent artery size (5.08 ± 1.8 mm vs. 3.95 ± 1.5 mm; p < 0.05), size ratio (2.22 ± 0.9 vs. 3.19 ± 1.8; p < 0.045) and aspect ratio (AR) (1.91 ± 0.8 vs. 2.75 ± 1.8; p = 0.02). Predicting factors differentiating anterior and posterior circulation IAs were: the AR (OR = 2.20; 95 % CI 1.80-270; Is 270 correct or should it be 2.70 and parent artery size (OR = 0.44; 95 % CI 0.38-0.54). The cutoff point in the ROC curve was 2.185 for the AR and 4.89 mm for parent artery size. Aspect ratio and parent artery size were found to be predictive morphometric factors in differentiating between anterior and posterior cerebral IAs.

Evaluation of pre-implantation kidney biopsies: comparison of Banff criteria to a morphometric approach.

PubMed

Lopes, José António; Moreso, Francesc; Riera, Luis; Carrera, Marta; Ibernon, Meritxell; Fulladosa, Xavier; Grinyó, Josep Maria; Serón, Daniel

2005-04-01

Donor glomerulosclerosis, interstitial fibrosis, and fibrous intimal thickening correlate with graft outcome. We evaluate chronic lesions in donor biopsies according to Banff criteria and with a morphometric technique to ascertain their predictive value on graft outcome. We evaluated 77 cadaveric donor biopsies according to Banff criteria. Glomerulosclerosis was expressed as the percentage of global sclerotic glomeruli. The following morphometric parameters were obtained: cortical interstitial volume fraction (Vvint/c), cortical glomerular volume fraction (Vvglom/c), mean glomerular volume (Vg), mean and maximal intimal arterial volume fraction (Vvintima/art), and Vvintima/art of the largest artery. We evaluated the correlation of histologic lesions with delayed graft function, 3 months' glomerular filtration rate (GFR), and death-censored graft survival. Multivariate logistic regression showed that delayed graft function was associated with cv score [relative risk (RR) 4.2 and 95% CI 1.1 to 16.0) and glomerulosclerosis (RR 1.06 and 95% CI 1.01 to 1.13). Stepwise regression showed that Vvint/c and glomerulosclerosis were independent predictors of 3 months' GFR (R= 0.62, P= 0.0001). Repeated analysis not considering morphometric parameters showed that glomerulosclerosis, cv score and ci score were independent predictors of 3 months' GFR (R= 0.64, P= 0.0001). A donor chronic damage score was generated considering glomerulosclerosis, cv score and ci score. This score after adjusting for clinical variables was associated with 3 months' GFR (R= 0.71, P < 0.0001) and death-censored graft survival (RR 2.2 and 95% CI 1.3 to 3.7). Combined evaluation of donor glomerulosclerosis, chronic vascular and interstitial damage according to Banff criteria allows a precise prediction of graft outcome. Morphometric evaluation of donor biopsies does not improve the predictive value of semiquantitative grading.

Censoring distances based on labeled cortical distance maps in cortical morphometry.

PubMed

Ceyhan, Elvan; Nishino, Tomoyuki; Alexopolous, Dimitrios; Todd, Richard D; Botteron, Kelly N; Miller, Michael I; Ratnanather, J Tilak

2013-01-01

It has been demonstrated that shape differences in cortical structures may be manifested in neuropsychiatric disorders. Such morphometric differences can be measured by labeled cortical distance mapping (LCDM) which characterizes the morphometry of the laminar cortical mantle of cortical structures. LCDM data consist of signed/labeled distances of gray matter (GM) voxels with respect to GM/white matter (WM) surface. Volumes and other summary measures for each subject and the pooled distances can help determine the morphometric differences between diagnostic groups, however they do not reveal all the morphometric information contained in LCDM distances. To extract more information from LCDM data, censoring of the pooled distances is introduced for each diagnostic group where the range of LCDM distances is partitioned at a fixed increment size; and at each censoring step, the distances not exceeding the censoring distance are kept. Censored LCDM distances inherit the advantages of the pooled distances but also provide information about the location of morphometric differences which cannot be obtained from the pooled distances. However, at each step, the censored distances aggregate, which might confound the results. The influence of data aggregation is investigated with an extensive Monte Carlo simulation analysis and it is demonstrated that this influence is negligible. As an illustrative example, GM of ventral medial prefrontal cortices (VMPFCs) of subjects with major depressive disorder (MDD), subjects at high risk (HR) of MDD, and healthy control (Ctrl) subjects are used. A significant reduction in laminar thickness of the VMPFC in MDD and HR subjects is observed compared to Ctrl subjects. Moreover, the GM LCDM distances (i.e., locations with respect to the GM/WM surface) for which these differences start to occur are determined. The methodology is also applicable to LCDM-based morphometric measures of other cortical structures affected by disease.

Morphometricity as a measure of the neuroanatomical signature of a trait.

PubMed

Sabuncu, Mert R; Ge, Tian; Holmes, Avram J; Smoller, Jordan W; Buckner, Randy L; Fischl, Bruce

2016-09-27

Complex physiological and behavioral traits, including neurological and psychiatric disorders, often associate with distributed anatomical variation. This paper introduces a global metric, called morphometricity, as a measure of the anatomical signature of different traits. Morphometricity is defined as the proportion of phenotypic variation that can be explained by macroscopic brain morphology. We estimate morphometricity via a linear mixed-effects model that uses an anatomical similarity matrix computed based on measurements derived from structural brain MRI scans. We examined over 3,800 unique MRI scans from nine large-scale studies to estimate the morphometricity of a range of phenotypes, including clinical diagnoses such as Alzheimer's disease, and nonclinical traits such as measures of cognition. Our results demonstrate that morphometricity can provide novel insights about the neuroanatomical correlates of a diverse set of traits, revealing associations that might not be detectable through traditional statistical techniques.

Morphometricity as a measure of the neuroanatomical signature of a trait

PubMed Central

Sabuncu, Mert R.; Ge, Tian; Holmes, Avram J.; Smoller, Jordan W.; Buckner, Randy L.; Fischl, Bruce

2016-01-01

Complex physiological and behavioral traits, including neurological and psychiatric disorders, often associate with distributed anatomical variation. This paper introduces a global metric, called morphometricity, as a measure of the anatomical signature of different traits. Morphometricity is defined as the proportion of phenotypic variation that can be explained by macroscopic brain morphology. We estimate morphometricity via a linear mixed-effects model that uses an anatomical similarity matrix computed based on measurements derived from structural brain MRI scans. We examined over 3,800 unique MRI scans from nine large-scale studies to estimate the morphometricity of a range of phenotypes, including clinical diagnoses such as Alzheimer’s disease, and nonclinical traits such as measures of cognition. Our results demonstrate that morphometricity can provide novel insights about the neuroanatomical correlates of a diverse set of traits, revealing associations that might not be detectable through traditional statistical techniques. PMID:27613854

Eruption and Degassing Processes in a Supervolcanic System: The Volatile Record Preserved in Melt Inclusions from the 3.49Ma Tara Ignimbrite in the Central Andes

NASA Astrophysics Data System (ADS)

Grocke, S.; de Silva, S. L.; Schmitt, A. K.; Wallace, P. J.

2010-12-01

Analysis of H2O and CO2 in quartz and sanidine-hosted melt inclusions from one of the youngest supervolcanic eruptions in the Altiplano Puna Volcanic Complex (APVC) in the Central Andes provides information on crystallization depths and eruption and degassing processes. At least 740 km3 of high-K, metaluminous, rhyodacite to rhyolite magma erupted from the Guacha Caldera in southwest Bolivia, producing three phases of the 3.49 Ma Tara Ignimbrite: a Plinian fall-deposit, an extensive ignimbrite, and several post-caldera domes. Infrared spectroscopic analyses of quartz-hosted melt inclusions from Tara Plinian pumice have H2O contents of ~4.5 wt % and variable CO2 contents (110-300 ppm), corresponding to vapor saturation pressures up to 180 MPa. In contrast, sanidine-hosted melt inclusions from the Plinian-fall deposit contain bubbles, lower water contents (1.4-2.2 wt %) and lower CO2 (87-143 ppm). These vesiculated melt inclusions and low volatile contents suggest that the sanidine crystals leaked on their ascent to the surface and therefore do not record accurate pre-eruptive melt volatile contents. In contrast, quartz-hosted melt inclusions from post-caldera dome samples contain lower H2O contents of 2.5-3.5 wt % (average 2.9 wt %) and no detectable CO2, corresponding to vapor saturation pressures of 50-90 MPa. These data indicate that the preeruptive plinian stage Tara magma was vapor saturated at the time of melt inclusion entrapment and stored between 5-6 km, while those from the post-caldera domes were trapped at 2-3 km. Differences in CO2 between Plinian and dome melt inclusions require that the post-caldera dome quartzes represent a different generation of crystals that grew as the magma slowly rose and progressively degassed at 2-3 km. During this shallow crystallization, the magma evolved further and eventually fed the post-caldera domes, one of which is a high-Si rhyolite. Consistent with this interpretation, melt inclusions from post-caldera dome samples contain lower OH/H2Om that indicate slower cooling rates compared to Plinian samples. The volatile record from pre and post-caldera deposits therefore reflects an eruptive history that was strongly influenced by volatile evolution within the Tara magma.

Lithospheric Structure Beneath the Hangay Dome, Central Mongolia

NASA Astrophysics Data System (ADS)

Stachnik, J. C.; Meltzer, A.; Souza, S.; Munkhuu, U.; Tsaagan, B.; Russo, R. M.

2014-12-01

The Mongolian Plateau is a broad regional uplift positioned between the Siberian Craton to the north and the far northern edge of the India-Asia collision to the south. Within this intracontinental setting of high topography, the Hangay Dome in central Mongolia reaches elevations of 4 km and contains intermittent basaltic magmatism over the last 30 Ma. The relationship between high topography, magmatism, and geodynamic processes remains largely unsolved although processes ranging from lithospheric delamination to mantle plume effects have been proposed. A temporary array of seismic stations was deployed around the Hangay Dome to determine lithospheric structure. Preliminary results are shown from receiver function analysis, ambient noise tomography, and teleseismic P-wave tomography. Crustal thickness measurements from H-k stacking of receiver functions range from 42 km to 57 km across the array, with thicker crust beneath the highest topography. The bulk crustal Vp/Vs ratio ranges from 1.71 to 1.9 with a median value for the array of 1.77, perhaps indicating a variable crustal composition with some regions having a more mafic crust. The stacked receiver functions are also combined with ambient noise phase velocity dispersion measurements in a joint inversion for shear velocity profiles at each station which reveals crustal thickness estimates consistent with the H-k stacks while also determining the shear velocity step at the Moho. Teleseismic P-wave travel time residuals ranging between +/-1 second are inverted for a 3D P-wave velocity model using finite-frequency kernels. Notable features include 1) a low velocity anomaly (-3%) in the upper 200 km beneath the eastern part of the Hangay Dome near the Orkhon River Valley, , 2) a steeply dipping low velocity anomaly to the north of the Hangay Dome, perhaps related to the nearby Baikal Rift, and 3) generally higher velocities in the upper 200 km surrounding the high topography. To first order, the high topography of the Hangay Dome appears to be largely supported by thickened crust. However, lower P-wave velocities in the upper mantle beneath the dome are observed. The relative contributions of crustal thickness and upper mantle structure for support of topography and their relationship to magmatism will be determined with further refinement of the models.

Distributions of cranial pathologies provide evidence for head-butting in dome-headed dinosaurs (Pachycephalosauridae).

PubMed

Peterson, Joseph E; Dischler, Collin; Longrich, Nicholas R

2013-01-01

Pachycephalosaurids are small, herbivorous dinosaurs with domed skulls formed by massive thickening of the cranial roof. The function of the dome has been a focus of debate: the dome has variously been interpreted as the product of sexual selection, as an adaptation for species recognition, or as a weapon employed in intraspecific combat, where it was used in butting matches as in extant ungulates. This last hypothesis is supported by the recent identification of cranial pathologies in pachycephalosaurids, which appear to represent infections resulting from trauma. However, the frequency and distribution of pathologies have not been studied in a systematic fashion. Here, we show that pachycephalosaurids are characterized by a remarkably high incidence of cranial injury, where 22% of specimens have lesions on the dome. Frequency of injury shows no significant difference between different genera, but flat-headed morphs (here interpreted as juveniles or females) lack lesions. Mapping of injuries onto a digitial pachycephalosaurid skull shows that although lesions are distributed across the dome, they cluster near the apex, which is consistent with the hypothesis that the dome functioned for intraspecific butting matches.

Seismic experiments on Showa-Shinzan lava dome using firework shots

NASA Astrophysics Data System (ADS)

Miyamachi, Hiroki; Watanabe, Hidefumi; Moriya, Takeo; Okada, Hiromu

1987-11-01

Seismic experiments were conducted on Showa-Shinzan, a parasitic lava dome of volcano Usu, Hokkaido, which was formed during 1943 1945 activity. Since we found that firework shots fired on the ground can effectively produce seismic waves, we placed many seismometers on and around the dome during the summer festivals in 1984 and 1985. The internal structure had been previously studied using a prospecting technique employing dynamite blasts in 1954. The measured interval velocity across the dome in 1984 ranges 1.8 2.2 km/s drastically low compared to the results (3.0 4.0 km/s) in 1954; in addition, the velocity is 0.3 0.5 km/s higher than that in the surrounding area. The variation of the observed first arrival amplitudes can be explained by geometrical spreading in the high velocity lava dome. These observations show a marked change in the internal physical state of the dome corresponding to a drop in the measured highest temperature at fumaroles on the dome from 800°C in 1947 to 310°C in 1986.

Dome growth at Mount Cleveland, Aleutian Arc, quantified by time-series TerraSAR-X imagery

USGS Publications Warehouse

Wang, Teng; Poland, Michael; Lu, Zhong

2016-01-01

Synthetic aperture radar imagery is widely used to study surface deformation induced by volcanic activity; however, it is rarely applied to quantify the evolution of lava domes, which is important for understanding hazards and magmatic system characteristics. We studied dome formation associated with eruptive activity at Mount Cleveland, Aleutian Volcanic Arc, in 2011–2012 using TerraSAR-X imagery. Interferometry and offset tracking show no consistent deformation and only motion of the crater rim, suggesting that ascending magma may pass through a preexisting conduit system without causing appreciable surface deformation. Amplitude imagery has proven useful for quantifying rates of vertical and areal growth of the lava dome within the crater from formation to removal by explosive activity to rebirth. We expect that this approach can be applied at other volcanoes that host growing lava domes and where hazards are highly dependent on dome geometry and growth rates.

Research on conformal dome of Karman-curve shape

NASA Astrophysics Data System (ADS)

Zhang, Yunqiang; Chang, Jun; Niu, Yajun

2018-01-01

Because the conformal optical technology can obviously improve the aerodynamic performance of the infrared guidance missile, it has been studied deeply in recent years. By comparing the performance of the missiles with conformal dome and conventional missiles, the advantages of the conformal optical technology are demonstrated in the maneuverability and stealth of the missile. At present, the study of conformal optical systems focuses on ellipsoid or quadratic curve types. But in actual use, the dome using these curves is not the best choice. In this paper, the influence of different shape of the dome on aerodynamic performance, aerodynamic heating, internal space volume and other properties is discussed. The result shows infrared optical system with conformal dome of Karman-curve shape has a good application prospect, is the future direction of development. Finally, the difficult problems of conformal dome of Karman-curve shape are discussed.

Baseline design and requirements for the LSST rotating enclosure (dome)

NASA Astrophysics Data System (ADS)

Neill, D. R.; DeVries, J.; Hileman, E.; Sebag, J.; Gressler, W.; Wiecha, O.; Andrew, J.; Schoening, W.

2014-07-01

The Large Synoptic Survey Telescope (LSST) is a large (8.4 meter) wide-field (3.5 degree) survey telescope, which will be located on the Cerro Pachón summit in Chile. As a result of the wide field of view, its optical system is unusually susceptible to stray light; consequently besides protecting the telescope from the environment the rotating enclosure (Dome) also provides indispensible light baffling. All dome vents are covered with light baffles which simultaneously provide both essential dome flushing and stray light attenuation. The wind screen also (and primarily) functions as a light screen providing only a minimum clear aperture. Since the dome must operate continuously, and the drives produce significant heat, they are located on the fixed lower enclosure to facilitate glycol water cooling. To accommodate day time thermal control, a duct system channels cooling air provided by the facility when the dome is in its parked position.

Sensitivity of storage field performance to geologic and cavern design parameters in salt domes.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Ehgartner, Brian L.; Park, Byoung Yoon

2009-03-01

A sensitivity study was performed utilizing a three dimensional finite element model to assess allowable cavern field sizes for strategic petroleum reserve salt domes. A potential exists for tensile fracturing and dilatancy damage to salt that can compromise the integrity of a cavern field in situations where high extraction ratios exist. The effects of salt creep rate, depth of salt dome top, dome size, caprock thickness, elastic moduli of caprock and surrounding rock, lateral stress ratio of surrounding rock, cavern size, depth of cavern, and number of caverns are examined numerically. As a result, a correlation table between the parametersmore » and the impact on the performance of storage field was established. In general, slower salt creep rates, deeper depth of salt dome top, larger elastic moduli of caprock and surrounding rock, and a smaller radius of cavern are better for structural performance of the salt dome.« less

Characteristics and mode of emplacement of gneiss domes and plutonic domes in central-eastern Pyrenees

NASA Astrophysics Data System (ADS)

Soula, Jean-Claude

Gneiss domes and plutonic granitoid domes make up almost 50% of the pre-Hercynian terrains in the Central and Eastern Pyrenees. From a structural study of the shape and internal structure of the domes and of their relationships with the enclosing rocks, it can be shown that both types of domes were emplaced diapirically during the major regional deformation phase and the peak of regional metamorphism. The study also shows that the internal structure, the overall shape and general behaviour relative to the host rocks are similar for plutonic domes and for gneiss domes. This appears to be in good agreement with H. Ramberg's (1967, Gravity Deformation and the Earth's Crust. Academic Press, London; 1970, Model studies in relation to intrusion of plutonic bodies. In: Mechanisms of Igneous Intrusion (edited by Newall, G. & Rast, N.) Geol. J. Spec. Issue2, 261-286.) model studies showing that dome or mushroom-like structures, similar to those observed, develop when there is a small viscosity ratio between the rising body and its enclosing medium. This implies a high crystal content for the granitoid magma. This crystal content has been estimated by (i) calculating the viscosity and density in natural conditions from petrological data for the magma considered as a suspension, using the model and program of J. P. Carron et al. (1978 Bull Soc. géol. Fr.20, 739-744.); (ii) using the recent results of experimental deformation of partially melted granites of I. van der Molen & M. S. Paterson (1979, Contr. Miner. Petrol.70, 299-318.) and (ii) comparing the preceding results with the data obtained by deformation experiments on rocks similar to those enclosing the domes. The minimum crystal content for the development of a dome-like structure has been, thus, estimated to about 70%, i.e. a value very close to that estimated by van der Molen & Paterson (1979) to be the critical value separating the granular framework flow from suspension-like behaviour. The effect of small variations in the viscosity of the rising body are then simulated by centrifuge experiments. These small variations appear to exert a strong control on the shape and rate of rise of the domes. They are thought to be sufficient to account for the variations in shape and structure and the level of emplacement of the different types of gneissic and plutonic domes. Finally, more complex experiments, with models built in order to simulate as closely as possible the natural structural evolution of the region as deduced from petrological and structural data, are reported. Their implications for the regional interpretation of the relationships between gneissic and plutonic domes is then discussed.

Quantitative analysis of histopathological findings using image processing software.

PubMed

Horai, Yasushi; Kakimoto, Tetsuhiro; Takemoto, Kana; Tanaka, Masaharu

2017-10-01

In evaluating pathological changes in drug efficacy and toxicity studies, morphometric analysis can be quite robust. In this experiment, we examined whether morphometric changes of major pathological findings in various tissue specimens stained with hematoxylin and eosin could be recognized and quantified using image processing software. Using Tissue Studio, hypertrophy of hepatocytes and adrenocortical cells could be quantified based on the method of a previous report, but the regions of red pulp, white pulp, and marginal zones in the spleen could not be recognized when using one setting condition. Using Image-Pro Plus, lipid-derived vacuoles in the liver and mucin-derived vacuoles in the intestinal mucosa could be quantified using two criteria (area and/or roundness). Vacuoles derived from phospholipid could not be quantified when small lipid deposition coexisted in the liver and adrenal cortex. Mononuclear inflammatory cell infiltration in the liver could be quantified to some extent, except for specimens with many clustered infiltrating cells. Adipocyte size and the mean linear intercept could be quantified easily and efficiently using morphological processing and the macro tool equipped in Image-Pro Plus. These methodologies are expected to form a base system that can recognize morphometric features and analyze quantitatively pathological findings through the use of information technology.

Controls on drainage divide migration in the northern Sierras Pampeanas assessed through morphometric indicators

NASA Astrophysics Data System (ADS)

Seagren, E. G.; Schoenbohm, L. M.

2017-12-01

Drainage reorganization, primarily through progressive divide migration leading to discrete stream captures, is increasingly recognized as a common phenomenon during mountain-building events. This drainage rearrangement reflects complex interactions between tectonics, climate, and lithology, and can fundamentally change erosion and sedimentation patterns; therefore, determining the spatial extent and potential controls of divide migration is vital to understanding the topographic evolution of orogenic landscapes. Both geomorphic and morphometric evidence can be used to identify such drainage reorganization. The northern Sierras Pampeanas is an ideal location in which to study divide migration as limited glaciation and low out-of-channel erosion rates preserve evidence of reorganization. Additionally, several ranges in the region, such as Sierra de las Planchadas, exhibit geomorphic evidence of drainage rearrangement, including wind gaps and hairpin turns. Using ArcGIS, LSDTopoTools, and TopoToolbox, we conducted a systematic analysis of the spatial distribution of three morphometric indicators of divide migration: χ, Mx, and local headwater relief. Local `hotspots' undergoing drainage divide migration were identified using spatial autocorrelation and clustering methods - Gi* and Moran's I. Using spatial regression analysis, we assessed the potential controls of lithology, modern TRMM precipitation rates, and tectonics over divide migration. Preliminary results suggest broad westward migration of main drainage divides, following both the orographic precipitation gradient and regional slope.

Automation process for morphometric analysis of volumetric CT data from pulmonary vasculature in rats.

PubMed

Shingrani, Rahul; Krenz, Gary; Molthen, Robert

2010-01-01

With advances in medical imaging scanners, it has become commonplace to generate large multidimensional datasets. These datasets require tools for a rapid, thorough analysis. To address this need, we have developed an automated algorithm for morphometric analysis incorporating A Visualization Workshop computational and image processing libraries for three-dimensional segmentation, vascular tree generation and structural hierarchical ordering with a two-stage numeric optimization procedure for estimating vessel diameters. We combine this new technique with our mathematical models of pulmonary vascular morphology to quantify structural and functional attributes of lung arterial trees. Our physiological studies require repeated measurements of vascular structure to determine differences in vessel biomechanical properties between animal models of pulmonary disease. Automation provides many advantages including significantly improved speed and minimized operator interaction and biasing. The results are validated by comparison with previously published rat pulmonary arterial micro-CT data analysis techniques, in which vessels were manually mapped and measured using intense operator intervention. Published by Elsevier Ireland Ltd.

[Differentiation by geometric morphometrics among 11 Anopheles (Nyssorhynchus) in Colombia].

PubMed

Calle, David Alonso; Quiñones, Martha Lucía; Erazo, Holmes Francisco; Jaramillo, Nicolás

2008-09-01

The correct identification of the Anopheles species of the subgenus Nyssorhynchus is important because this subgenus includes the main malaria vectors in Colombia. This information is necessary for focusing a malaria control program. Geometric morphometrics were used to evaluate morphometric variation of 11 species of subgenus Nyssorhynchus present in Colombia and to distinguish females of each species. Materials and methods. The specimens were obtained from series and family broods from females collected with protected human hosts as attractants. The field collected specimens and their progeny were identified at each of the associated stages by conventional keys. For some species, wild females were used. Landmarks were selected on wings from digital pictures from 336 individuals, and digitized with coordinates. The coordinate matrix was processed by generalized Procrustes analysis which generated size and shape variables, free of non-biological variation. Size and shape variables were analyzed by univariate and multivariate statistics. The subdivision of subgenus Nyssorhynchus in sections is not correlated with wing shape. Discriminant analyses correctly classified 97% of females in the section Albimanus and 86% in the section Argyritarsis. In addition, these methodologies allowed the correct identification of 3 sympatric species from Putumayo which have been difficult to identify in the adult female stage. The geometric morphometrics were demonstrated to be a very useful tool as an adjunct to taxonomy of females the use of this method is recommended in studies of the subgenus Nyssorhynchus in Colombia.

Morphometric variability within the axial zone of the southern Juan de Fuca Ridge: Interpretation from Sea MARC II, Sea MARC I, and deep-sea photography

USGS Publications Warehouse

Kappel, Ellen S.; Normark, William R.

1987-01-01

The morphometric characteristics of the axial regions of oceanic spreading centers are determined by (1) the type of volcanic flows, (2) the relation between primary volcanic relief (on a scale of a few meters to tens of meters) and degree of sediment cover, and (3) the extent of surficial expression and timing of tectonic disruption of the young oceanic crust. Even within a single, continuous, linear spreading-ridge segment with relatively uniform axial valley dimensions over a distance of 50 or more kilometers, such as along the southern Juan de Fuca Ridge, the changes in morphometric characteristics along axis within the youngest crust indicate distinct variation in tectonic and volcanic activity over short distances within short time periods. An integrated analysis of Sea MARC I, Sea MARC II, and photographic data for the southernmost continuous segment of the Juan de Fuca Ridge shows that generalizations about tectonic and volcanic processes at spreading ridges must consider both the temporal scale of processes as well as the physical scales of observations if predictive models are to be successful. Comparison of the morphometric expression within the major hydrothermal vent area and the rest of the southernmost ridge segment suggests that the mapped distribution of hydrothermal vents may reflect the extent of survey effort rather than uniqueness of geologic setting.

Taxonomic Approach to the Tachinid Flies Dinera carinifrons (Fallén) (Diptera: Tachinidae) and Dinera fuscata Zhang and Shima using Molecular and Morphometric Data

PubMed Central

Lutovinovas, Erikas; Malenovský, Igor; Tóthová, Andrea; Ziegler, Joachim; Vaňhara, Jaromír

2013-01-01

Molecular phylogenetic and traditional morphometric methods were applied to examine six Palaearctic taxa of the taxonomically difficult tachinid fly genus Dinera Robineau-Desvoidy (Diptera: Tachinidae), with particular reference to D. carinifrons (Fallén) and D. fuscata Zhang and Shima. Results of a phylogenetic analysis based on the mitochondrial markers 12S and 16S rDNA and multivariate statistical analyses of 19 morphometric characters were used to delimit both species. A lectotype was designated for D. carinifrons to stabilize the nomenclature in the group. Dinera carinifrons has a transpalaearctic distribution and is present in Central Europe, especially in high altitudes of the Alps. It differs from the similar and closely related D. fuscata in that it has a slightly larger body size, a dense greyish microtrichosity on the body, and different head proportions. Dinera fuscata, as delimited here, is widespread in the Palaearctic region, including Europe. Slight differences in both molecular and morphometric characters were found between western (Europe and Iran) and eastern (China and Japan) populations of D. fuscata, which are interpreted as an intraspecific variation. Differential diagnosis between D. carinifrons and D. fuscata is provided in the form of a revised portion of the determination key to the Palaearctic Dinera by Zhang and Shima (2006). PMID:24787238

DNA barcoding and wing morphometrics to distinguish three Aedes vectors in Thailand.

PubMed

Sumruayphol, Suchada; Apiwathnasorn, Chamnarn; Ruangsittichai, Jiraporn; Sriwichai, Patchara; Attrapadung, Siriluck; Samung, Yudthana; Dujardin, Jean-Pierre

2016-07-01

Aedes aegypti (Diptera: Culicidae) (L.), Ae. albopictus (Skuse), and Ae. scutellaris (Walker) are important mosquito vectors of dengue and chikungunya viruses. They are morphologically similar and sympatric in some parts of their distribution; therefore, there is a risk of incorrect morphological identification. Any confusion could have a negative impact on epidemiological studies or control strategies. Therefore, we explored two modern tools to supplement current morphological identification: DNA barcoding and geometric morphometric analyses. Field larvae were reared to adults and carefully classified based on morphological traits. The genetic analysis was based on the 658bp each of 30COI sequences. Some Culex spp., Mansonia bonneae, were included as outgroups, and inclusion of a few other Aedes spp. facilitated phylogenetic inference of the relationship between Ae. albopictus and Ae. scutellaris. The two species were separated by an average interspecific divergence of 0.123 (0.119-0.127). Morphometric examination included landmark- (392 specimens) and outline-based (317 specimens) techniques. The shape of the wing showed different discriminating power based on sex and digitizing technique. This is the first time that Ae. scutellaris and Ae. albopictus have been compared using these two techniques. We confirm that these morphologically close species are valid, and that geometric morphometrics can considerably increase the reliability of morphological identification. Copyright © 2016 Elsevier B.V. All rights reserved.

Monolithic Domes.

ERIC Educational Resources Information Center

Lanham, Carol

2002-01-01

Describes how the energy savings, low cost, and near-absolute protection from tornadoes provided by monolithic domes is starting to appeal to school districts for athletic and other facilities, including the Italy (Texas) Independent School District. Provides an overview of monolithic dome construction. (EV)

Influence of extrusion rate and magma rheology on the growth of lava domes: Insights from particle-dynamics modeling

NASA Astrophysics Data System (ADS)

Husain, Taha; Elsworth, Derek; Voight, Barry; Mattioli, Glen; Jansma, Pamela

2014-09-01

Lava domes are structures that grow by the extrusion of viscous silicic or intermediate composition magma from a central volcanic conduit. Repeated cycles of growth are punctuated by collapse, as the structure becomes oversized for the strength of the composite magma that rheologically stiffens and strengthens at its surface. Here we explore lava dome growth and failure mechanics using a two-dimensional particle-dynamics model. The model follows the evolution of fractured lava, with solidification driven by degassing induced crystallization of magma. The particle-dynamics model emulates the natural development of dome growth and rearrangement of the lava dome which is difficult in mesh-based analyses due to mesh entanglement effects. The deformable talus evolves naturally as a frictional carapace that caps a ductile magma core. Extrusion rate and magma rheology together with crystallization temperature and volatile content govern the distribution of strength in the composite structure. This new model is calibrated against existing observational models of lava dome growth. Results show that the shape and extent of the ductile core and the overall structure of the lava dome are strongly controlled by the infusion rate. The effects of extrusion rate on magma rheology are sensitive to material stiffness, which in turn is a function of volatile content and crystallinity. Material stiffness and material strength are key model parameters which govern magma rheology and subsequently the morphological character of the lava dome and in turn stability. Degassing induced crystallization causes material stiffening and enhances material strength reflected in non-Newtonian magma behavior. The increase in stiffness and strength of the injected magma causes a transition in the style of dome growth, from endogenous expansion of a ductile core, to stiffer and stronger intruding material capable of punching through the overlying material and resulting in the development of a spine or possibly inducing dome collapse. Simulation results mimic development of a megaspine upon the influx of fresh magma which leads to the re-direction of magma flow, creating a new shear zone and the switching of dome growth from one side to the other. Our model shows similar dome growth dynamics as observed at Soufriere Hills Volcano, Montserrat, indicating a strong correlation between extrusion rate and its subsequent effect on mechanical properties and variations in magma rheology.

Gas-controlled seafloor doming on Opouawe Bank, offshore New Zealand

NASA Astrophysics Data System (ADS)

Koch, Stephanie; Berndt, Christian; Bialas, Joerg; Haeckel, Matthias; Crutchley, Gareth; Papenberg, Cord; Klaeschen, Dirk; Greinert, Jens

2015-04-01

The process of gas accumulation and subsequent sediment doming appears to be a precursory process in the development of methane seep sites on Opouawe Bank and might be a common characteristic for gas seeps in general. Seabed domes appear as unimpressive topographic highs with diameters ranging from 10-1000 m and exhibit small vertical displacements and layer thickness in comparison to their width. The dome-like uplift of the sediments results from an increase in pore pressure caused by gas accumulation in near-seabed sediments. In this context sediment doming is widely discussed to be a precursor of pockmark formation. Our results suggest that by breaching of domed seafloor sediments a new seep site can develop and contrary to ongoing discussion does not necessarily lead to the formation of pockmarks. There are clear differences in individual gas migration structures that indicate a progression through different evolutionary stages, which range from channeled gas flow and associated seismic blanking, to gas trapping beneath relatively low-permeability horizons, and finally overpressure accumulation and doming. We present high resolution sub-bottom profiler (Parasound) and 2D multichannel seismic data from Opouawe Bank, an accretionary ridge at the Hikurangi Margin, offshore New Zealand's North Island. Beneath this bank, methane migrates along stratigraphic pathways from a maximum source depth of 1500-2100 mbsf (meter below seafloor) towards active cold seeps at the seafloor. We show that, in the shallow sediment of the upper 100 mbsf, this primary migration mechanism changes into a process of gas accumulation leading to sediment doming. Modeling the height of the gas column necessary to create different dome geometries, shows that doming due to gas accumulation is feasible and consistent with field observations. The well-stratified, sub-horizontal strata that exist beneath Opouawe Bank provide favorable conditions for this type of seep development because shallow sub-vertical gas migration is forced to traverse sedimentary layering in the absence of faults that might otherwise have provided more efficient gas migration pathways. Thus, gas has to generate its own migration pathways through the progressive process of doming and breaking through the strata. The data from offshore New Zealand document that shallow sediment doming does not have to be associated with seafloor pockmarks and that models in which fluid migration through soft sediments necessarily culminates in pockmark formations are not applicable everywhere.

Morphology and identification of the final instar nymphs of three cicadas (Hemiptera, Cicadidae) in Guanzhong Plain, China based on comparative morphometrics.

PubMed

Hou, Zehai; Li, Qinglong; Wei, Cong

2014-01-01

The present investigation provides comparative morphometrics of the final instar nymphs of three dominant cicada species, i.e., Cryptotympana atrata (Fabricius), Meimuna mongolica (Distant) and Platypleura kaempferi (Fabricius), in Guanzhong Plain, China. Particularly, characters on the antennae, legs, and apex of abdomen of both males and females of these three species were investigated and analyzed. In addition, the numbers of hind tibial spines of the final instar nymphs of 21 representatives of Cicadoidea were compared. The results provide useful characteristics for nymph identification of related species and for further taxonomic and phylogenetic analysis of Cicadoidea.

Morphology and identification of the final instar nymphs of three cicadas (Hemiptera, Cicadidae) in Guanzhong Plain, China based on comparative morphometrics

PubMed Central

Hou, Zehai; Li, Qinglong; Wei, Cong

2014-01-01

Abstract The present investigation provides comparative morphometrics of the final instar nymphs of three dominant cicada species, i.e., Cryptotympana atrata (Fabricius), Meimuna mongolica (Distant) and Platypleura kaempferi (Fabricius), in Guanzhong Plain, China. Particularly, characters on the antennae, legs, and apex of abdomen of both males and females of these three species were investigated and analyzed. In addition, the numbers of hind tibial spines of the final instar nymphs of 21 representatives of Cicadoidea were compared. The results provide useful characteristics for nymph identification of related species and for further taxonomic and phylogenetic analysis of Cicadoidea. PMID:25147447

A Planetarium Inside Your Office: Virtual Reality in the Dome Production Pipeline

NASA Astrophysics Data System (ADS)

Summers, Frank

2018-01-01

Producing astronomy visualization sequences for a planetarium without ready access to a dome is a distorted geometric challenge. Fortunately, one can now use virtual reality (VR) to simulate a dome environment without ever leaving one's office chair. The VR dome experience has proven to be a more than suitable pre-visualization method that requires only modest amounts of processing beyond the standard production pipeline. It also provides a crucial testbed for identifying, testing, and fixing the visual constraints and artifacts that arise in a spherical presentation environment. Topics adreesed here will include rendering, geometric projection, movie encoding, software playback, and hardware setup for a virtual dome using VR headsets.

A desktop system of virtual morphometric globes for Mars and the Moon

NASA Astrophysics Data System (ADS)

Florinsky, I. V.; Filippov, S. V.

2017-03-01

Global morphometric models can be useful for earth and planetary studies. Virtual globes - programs implementing interactive three-dimensional (3D) models of planets - are increasingly used in geo- and planetary sciences. We describe the development of a desktop system of virtual morphometric globes for Mars and the Moon. As the initial data, we used 15'-gridded global digital elevation models (DEMs) extracted from the Mars Orbiter Laser Altimeter (MOLA) and the Lunar Orbiter Laser Altimeter (LOLA) gridded archives. For two celestial bodies, we derived global digital models of several morphometric attributes, such as horizontal curvature, vertical curvature, minimal curvature, maximal curvature, and catchment area. To develop the system, we used Blender, the free open-source software for 3D modeling and visualization. First, a 3D sphere model was generated. Second, the global morphometric maps were imposed to the sphere surface as textures. Finally, the real-time 3D graphics Blender engine was used to implement rotation and zooming of the globes. The testing of the developed system demonstrated its good performance. Morphometric globes clearly represent peculiarities of planetary topography, according to the physical and mathematical sense of a particular morphometric variable.

An assessment of hydrothermal alteration in the Santiaguito lava dome complex, Guatemala: implications for dome collapse hazards

USGS Publications Warehouse

Ball, Jessica L.; Calder, Eliza S.; Hubbard, Bernard E.; Bernstein, Marc L.

2013-01-01

A combination of field mapping, geochemistry, and remote sensing methods has been employed to determine the extent of hydrothermal alteration and assess the potential for failure at the Santiaguito lava dome complex, Guatemala. The 90-year-old complex of four lava domes has only experienced relatively small and infrequent dome collapses in the past, which were associated with lava extrusion. However, existing evidence of an active hydrothermal system coupled with intense seasonal precipitation also presents ideal conditions for instability related to weakened clay-rich edifice rocks. Mapping of the Santiaguito dome complex identified structural features related to dome growth dynamics, potential areas of weakness related to erosion, and locations of fumarole fields. X-ray diffraction and backscattered electron images taken with scanning electron microscopy of dacite and ash samples collected from around fumaroles revealed only minor clay films, and little evidence of alteration. Mineral mapping using ASTER and Hyperion satellite images, however, suggest low-temperature (<150 °C) silicic alteration on erosional surfaces of the domes, but not the type of pervasive acid-sulfate alteration implicated in collapses of other altered edifices. To evaluate the possibility of internal alteration, we re-examined existing aqueous geochemical data from dome-fed hot springs. The data indicate significant water–rock interaction, but the Na–Mg–K geoindicator suggests only a short water residence time, and δ18O/δD ratios show only minor shifts from the meteoric water line with little precipitation of secondary (alteration) minerals. Based on available data, hydrothermal alteration on the dome complex appears to be restricted to surficial deposits of hydrous silica, but the study has highlighted, importantly, that the 1902 eruption crater headwall of Santa María does show more advanced argillic alteration. We also cannot rule out the possibility of advanced alteration within the dome complex interior that is not accessible to the methods used here. It may therefore be prudent to employ geophysical methods to make further assessments in the future.

Deformation sequence of Baltimore gneiss domes, USA, assessed from porphyroblast Foliation Intersection Axes

NASA Astrophysics Data System (ADS)

Yeh, Meng-Wan

2007-05-01

The NE-SW trending gneiss domes around Baltimore, Maryland, USA, have been cited as classic examples of mantled gneiss domes formed by diapiric rise of migmatitic gneisses [Eskola, P., 1949. The problem of mantled gneiss domes. Quarterly Journal of Geological Society of London 104/416, 461-476]. However, 3-D analysis of porphyroblast-matrix foliation relations and porphyroblast inclusion trail geometries suggests that they are the result of interference between multiple refolding of an early-formed nappe. A succession of six FIA (Foliation Intersection Axes) sets, based upon relative timing of inclusion texture in garnet and staurolite porphyroblasts, revealed 6 superposed deformation phases. The successions of inclusion trail asymmetries, formed around these FIAs, document the geometry of deformation associated with folding and fabric development during discrete episodes of bulk shortening. Exclusive top to NW shear asymmetries of curvature were recorded by inclusion trails associated with the vertical collapsing event within the oldest FIA set (NE-SW trend). This strongly indicates a large NE-SW-striking, NW-verging nappe had formed early during this deformation sequence. This nappe was later folded into NE-SW-trending up-right folds by coaxial shortening indicated by an almost equal proportion of both inclusion trail asymmetries documented by the second N-S-trending FIA set. These folds were then amplified by later deformation, as the following FIA sets showed an almost equal proportion of both inclusion trail asymmetries.

Seasonal variations in the major chemical species of snow at the South East Dome in Greenland

NASA Astrophysics Data System (ADS)

Oyabu, Ikumi; Matoba, Sumito; Yamasaki, Tetsuhide; Kadota, Moe; Iizuka, Yoshinori

2016-03-01

We analyze snow-pit samples collected in May 2015 at the South East Dome (SE Dome) on the Greenland ice sheet. The analysis includes high-resolution records of δD and δ18O, as well as the major ions, CH3SO3-, Cl-, NO3-, SO42-, Na+, NH4+, K+, Ma2+, and Ca2+. We find that the 3.55-m snow pit recorded temperature and aerosol proxies back to summer or autumn of 2014. This indicates a higher accumulation rate than those at other major drilling sites in Greenland. Due to this high accumulation rate, ion concentrations except Na+ are lower than those typical of the central Greenland ice sheet. Concerning seasonal variability, the Na+, Cl-, Ca2+, Mg2+, and NO3- vary similarly to other sites in Greenland, with the Na+ and Cl- peaking in winter to early spring, Ca2+ peaking in spring, Mg2+ peaking in winter to spring, and NO3- towards a peak in summer while showing smaller peaks in winter to spring. The NH4+ increased in spring, and SO42- increased in autumn to winter at SE Dome. On the other hand, the seasonal trend in the Cl-/Na+ ratio differs from those in the inland region. As we did not fully recover one seasonal cycle, some seasonal peaks may have been missed.

Effects of early activator treatment in patients with class II malocclusion evaluated by thin-plate spline analysis.

PubMed

Lux, C J; Rübel, J; Starke, J; Conradt, C; Stellzig, P A; Komposch, P G

2001-04-01

The aim of the present longitudinal cephalometric study was to evaluate the dentofacial shape changes induced by activator treatment between 9.5 and 11.5 years in male Class II patients. For a rigorous morphometric analysis, a thin-plate spline analysis was performed to assess and visualize dental and skeletal craniofacial changes. Twenty male patients with a skeletal Class II malrelationship and increased overjet who had been treated at the University of Heidelberg with a modified Andresen-Häupl-type activator were compared with a control group of 15 untreated male subjects of the Belfast Growth Study. The shape changes for each group were visualized on thin-plate splines with one spline comprising all 13 landmarks to show all the craniofacial shape changes, including skeletal and dento-alveolar reactions, and a second spline based on 7 landmarks to visualize only the skeletal changes. In the activator group, the grid deformation of the total spline pointed to a strong activator-induced reduction of the overjet that was caused both by a tipping of the incisors and by a moderation of sagittal discrepancies, particularly a slight advancement of the mandible. In contrast with this, in the control group, only slight localized shape changes could be detected. Both in the 7- and 13-landmark configurations, the shape changes between the groups differed significantly at P < .001. In the present study, the morphometric approach of thin-plate spline analysis turned out to be a useful morphometric supplement to conventional cephalometrics because the complex patterns of shape change could be suggestively visualized.

Cleaner for Solar-Collector Covers

NASA Technical Reports Server (NTRS)

Frickland, P. O.; Cleland, E. L.

1983-01-01

Simple self-contained cleaning system proposed for solar collectors or solar-collector protective domes. Perforated transparent plastic cap attached to top of protective dome in heliostat solar-energy collection system distributes cleaning fluid over surface of dome without blocking significant fraction of solar radiation.

Himalayan gneiss dome formation in the middle crust and exhumation by normal faulting: New geochronology of Gianbul dome, northwestern India

USGS Publications Warehouse

Horton, Forrest; Lee, Jeffrey; Hacker, Bradley; Bowman-Kamaha'o, Meilani; Cosca, Michael A.

2015-01-01

A general lack of consensus about the origin of Himalayan gneiss domes hinders accurate thermomechanical modeling of the orogen. To test whether doming resulted from tectonic contraction (e.g., thrust duplex formation, antiformal bending above a thrust ramp, etc.), channel flow, or via the buoyant rise of anatectic melts, this study investigates the depth and timing of doming processes for Gianbul dome in the western Himalaya. The dome is composed of Greater Himalayan Sequence migmatite, Paleozoic orthogneiss, and metasedimentary rock cut by multiple generations of leucogranite dikes. These rocks record a major penetrative D2 deformational event characterized by a domed foliation and associated NE-SW–trending stretching lineation, and they are flanked by the top-down-to-the-SW (normal-sense) Khanjar shear zone and the top-down-to-the-NE (normal sense) Zanskar shear zone (the western equivalent of the South Tibetan detachment system). Monazite U/Th-Pb geochronology records (1) Paleozoic emplacement of the Kade orthogneiss and associated granite dikes; (2) prograde Barrovian metamorphism from 37 to 33 Ma; (3) doming driven by upper-crustal extension and positive buoyancy of decompression melts between 26 and 22 Ma; and (4) the injection of anatectic melts into the upper levels of the dome—neutralizing the effects of melt buoyancy and potentially adding strength to the host rock—by ca. 22.6 Ma on the southwestern flank and ca. 21 Ma on the northeastern flank. As shown by a northeastward decrease in 40Ar/39Ar muscovite dates from 22.4 to 20.2 Ma, ductile normal-sense displacement within the Zanskar shear zone ended by ca. 22 Ma, after which the Gianbul dome was exhumed as part of a rigid footwall block below the brittle Zanskar normal fault, tilting an estimated 5°–10°SW into its present orientation.

Quantitative morphometric analysis for the tectonic characterisation of northern Tunisia.

NASA Astrophysics Data System (ADS)

Camafort, Miquel; Pérez-Peña, José Vicente; Booth-Rea, Guillermo; Ranero, César R.; Gràcia, Eulàlia; Azañón, José Miguel; Melki, Fetheddine; Ouadday, Mohamed

2016-04-01

Northern Tunisia is characterized by low deformation rates and low to moderate seismicity. Although instrumental seismicity reaches maximum magnitudes of Mw 5.5, some historical earthquakes have occurred with catastrophic consequences in this region. Aiming to improve our knowledge of active tectonics in Tunisia, we carried out both a quantitative morphometric analysis and field study in the north-western region. We applied different morphometric tools, like river profiles, knickpoint analysis, hypsometric curves and integrals and drainage pattern anomalies in order to differentiate between zones with high or low recent tectonic activity. This analysis helps identifying uplift and subsidence zones, which we relate to fault activity. Several active faults in a sparse distribution were identified. A selected sector was studied with a field campaign to test the results obtained with the quantitative analysis. During the fieldwork we identified geological evidence of recent activity and a considerable seismogenic potential along El Alia-Teboursouk (ETF) and Dkhila (DF) faults. The ETF fault could be responsible of one of the most devastating historical earthquakes in northern Tunisia that destroyed Utique in 412 A.D. Geological evidence include fluvial terraces folded by faults, striated and cracked pebbles, clastic dikes, sand volcanoes, coseismic cracks, etc. Although not reflected in the instrumental seismicity, our results support an important seismic hazard, evidenced by the several active tectonic structures identified and the two seismogenic faults described. After obtaining the current active tectonic framework of Tunisia we discuss our results within the western Mediterranean trying to contribute to the understanding of the western Mediterranean tectonic context. With our results, we suggest that the main reason explaining the sparse and scarce seismicity of the area in contrast with the adjacent parts of the Nubia-Eurasia boundary is due to its extended continental platform and its lack of proto-oceanic crust northward.

Correlation of tumor-infiltrating lymphocytes to histopathological features and molecular phenotypes in canine mammary carcinoma: A morphologic and immunohistochemical morphometric study.

PubMed

Kim, Jong-Hyuk; Chon, Seung-Ki; Im, Keum-Soon; Kim, Na-Hyun; Sur, Jung-Hyang

2013-04-01

Abundant lymphocyte infiltration is frequently found in canine malignant mammary tumors, but the pathological features and immunophenotypes associated with the infiltration remain to be elucidated. The aim of the present study was to evaluate the relationship between lymphocyte infiltration, histopathological features, and molecular phenotype in canine mammary carcinoma (MC). The study was done with archived formalin-fixed, paraffin-embedded samples (n = 47) by histologic and immunohistochemical methods. The degree of lymphocyte infiltration was evaluated by morphologic analysis, and the T- and B-cell populations as well as the T/B-cell ratio were evaluated by morphometric analysis; results were compared with the histologic features and molecular phenotypes. The degree of lymphocyte infiltration was significantly higher in MCs with lymphatic invasion than in those without lymphatic invasion (P < 0.0001) and in tumors of high histologic grade compared with those of lower histologic grade (P = 0.045). Morphometric analysis showed a larger amount of T-cells and B-cells in MCs with a higher histologic grade and lymphatic invasion, but the T/B ratio did not change. Lymphocyte infiltration was not associated with histologic type or molecular phenotype, as assessed from the immunohistochemical expression of epidermal growth factor receptor 2, estrogen receptor, cytokeratin 14, and p63. Since intense lymphocyte infiltration was associated with aggressive histologic features, lymphocytes may be important for tumor aggressiveness and greater malignant behavior in the tumor microenvironment.

Phenotypic variation in dorsal fin morphology of coastal bottlenose dolphins (Tursiops truncatus) off Mexico

PubMed Central

Rocha-Olivares, Axayácatl; Morteo, Rodrigo; Weller, David W.

2017-01-01

Geographic variation in external morphology is thought to reflect an interplay between genotype and the environment. Morphological variation has been well-described for a number of cetacean species, including the bottlenose dolphin (Tursiops truncatus). In this study we analyzed dorsal fin morphometric variation in coastal bottlenose dolphins to search for geographic patterns at different spatial scales. A total of 533 dorsal fin images from 19 available photo-identification catalogs across the three Mexican oceanic regions (Pacific Ocean n = 6, Gulf of California n = 6 and, Gulf of Mexico n = 7) were used in the analysis. Eleven fin shape measurements were analyzed to evaluate fin polymorphism through multivariate tests. Principal Component Analysis on log-transformed standardized ratios explained 94% of the variance. Canonical Discriminant Function Analysis on factor scores showed separation among most study areas (p < 0.05) with exception of the Gulf of Mexico where a strong morphometric cline was found. Possible explanations for the observed differences are related to environmental, biological and evolutionary processes. Shape distinction between dorsal fins from the Pacific and those from the Gulf of California were consistent with previously reported differences in skull morphometrics and genetics. Although the functional advantages of dorsal fin shape remains to be assessed, it is not unlikely that over a wide range of environments, fin shape may represent a trade-off among thermoregulatory capacity, hydrodynamic performance and the swimming/hunting behavior of the species. PMID:28626607

Geometric morphometric footprint analysis of young women

PubMed Central

2013-01-01

Background Most published attempts to quantify footprint shape are based on a small number of measurements. We applied geometric morphometric methods to study shape variation of the complete footprint outline in a sample of 83 adult women. Methods The outline of the footprint, including the toes, was represented by a comprehensive set of 85 landmarks and semilandmarks. Shape coordinates were computed by Generalized Procrustes Analysis. Results The first four principal components represented the major axes of variation in foot morphology: low-arched versus high-arched feet, long and narrow versus short and wide feet, the relative length of the hallux, and the relative length of the forefoot. These shape features varied across the measured individuals without any distinct clusters or discrete types of footprint shape. A high body mass index (BMI) was associated with wide and flat feet, and a high frequency of wearing high-heeled shoes was associated with a larger forefoot area of the footprint and a relatively long hallux. Larger feet had an increased length-to-width ratio of the footprint, a lower-arched foot, and longer toes relative to the remaining foot. Footprint shape differed on average between left and right feet, and the variability of footprint asymmetry increased with BMI. Conclusions Foot shape is affected by lifestyle factors even in a sample of young women (median age 23 years). Geometric morphometrics proved to be a powerful tool for the detailed analysis of footprint shape that is applicable in various scientific disciplines, including forensics, orthopedics, and footwear design. PMID:23886074

BMI and WHR Are Reflected in Female Facial Shape and Texture: A Geometric Morphometric Image Analysis.

PubMed

Mayer, Christine; Windhager, Sonja; Schaefer, Katrin; Mitteroecker, Philipp

2017-01-01

Facial markers of body composition are frequently studied in evolutionary psychology and are important in computational and forensic face recognition. We assessed the association of body mass index (BMI) and waist-to-hip ratio (WHR) with facial shape and texture (color pattern) in a sample of young Middle European women by a combination of geometric morphometrics and image analysis. Faces of women with high BMI had a wider and rounder facial outline relative to the size of the eyes and lips, and relatively lower eyebrows. Furthermore, women with high BMI had a brighter and more reddish skin color than women with lower BMI. The same facial features were associated with WHR, even though BMI and WHR were only moderately correlated. Yet BMI was better predictable than WHR from facial attributes. After leave-one-out cross-validation, we were able to predict 25% of variation in BMI and 10% of variation in WHR by facial shape. Facial texture predicted only about 3-10% of variation in BMI and WHR. This indicates that facial shape primarily reflects total fat proportion, rather than the distribution of fat within the body. The association of reddish facial texture in high-BMI women may be mediated by increased blood pressure and superficial blood flow as well as diet. Our study elucidates how geometric morphometric image analysis serves to quantify the effect of biological factors such as BMI and WHR to facial shape and color, which in turn contributes to social perception.

Bat Species Comparisons Based on External Morphology: A Test of Traditional versus Geometric Morphometric Approaches

PubMed Central

Schmieder, Daniela A.; Benítez, Hugo A.; Borissov, Ivailo M.; Fruciano, Carmelo

2015-01-01

External morphology is commonly used to identify bats as well as to investigate flight and foraging behavior, typically relying on simple length and area measures or ratios. However, geometric morphometrics is increasingly used in the biological sciences to analyse variation in shape and discriminate among species and populations. Here we compare the ability of traditional versus geometric morphometric methods in discriminating between closely related bat species – in this case European horseshoe bats (Rhinolophidae, Chiroptera) – based on morphology of the wing, body and tail. In addition to comparing morphometric methods, we used geometric morphometrics to detect interspecies differences as shape changes. Geometric morphometrics yielded improved species discrimination relative to traditional methods. The predicted shape for the variation along the between group principal components revealed that the largest differences between species lay in the extent to which the wing reaches in the direction of the head. This strong trend in interspecific shape variation is associated with size, which we interpret as an evolutionary allometry pattern. PMID:25965335

46 CFR 153.256 - Trunks, domes, and openings of cargo tanks.

Code of Federal Regulations, 2011 CFR

2011-10-01

... Equipment Cargo Tanks § 153.256 Trunks, domes, and openings of cargo tanks. (a) The hatch of a cargo tank... uppermost part of the tank, extending above the weatherdeck; (2) Its hatch at the top of the trunk or dome...

46 CFR 153.256 - Trunks, domes, and openings of cargo tanks.

Code of Federal Regulations, 2010 CFR

2010-10-01

... Equipment Cargo Tanks § 153.256 Trunks, domes, and openings of cargo tanks. (a) The hatch of a cargo tank... uppermost part of the tank, extending above the weatherdeck; (2) Its hatch at the top of the trunk or dome...

46 CFR 153.256 - Trunks, domes, and openings of cargo tanks.

Code of Federal Regulations, 2012 CFR

2012-10-01

... Equipment Cargo Tanks § 153.256 Trunks, domes, and openings of cargo tanks. (a) The hatch of a cargo tank... uppermost part of the tank, extending above the weatherdeck; (2) Its hatch at the top of the trunk or dome...

46 CFR 153.256 - Trunks, domes, and openings of cargo tanks.

Code of Federal Regulations, 2013 CFR

2013-10-01

... Equipment Cargo Tanks § 153.256 Trunks, domes, and openings of cargo tanks. (a) The hatch of a cargo tank... uppermost part of the tank, extending above the weatherdeck; (2) Its hatch at the top of the trunk or dome...

46 CFR 153.256 - Trunks, domes, and openings of cargo tanks.

Code of Federal Regulations, 2014 CFR

2014-10-01

... Equipment Cargo Tanks § 153.256 Trunks, domes, and openings of cargo tanks. (a) The hatch of a cargo tank... uppermost part of the tank, extending above the weatherdeck; (2) Its hatch at the top of the trunk or dome...

Astronaut Alan Bean doing acrobatics in OWS dome area

NASA Technical Reports Server (NTRS)

1973-01-01

Astronaut Alan L. Bean, Skylab 3 commander, doing acrobatics in the dome area of the Orbital Workshop (OWS) on the space station cluster in Earth orbit. The dome area is about 22 feet in diameter and 19 feet from top to bottom.

How To Improve Work In Planetarium?

NASA Astrophysics Data System (ADS)

Pavicic, G.

2009-09-01

Planetariums can provide an immersive environment for scientific education, virtual reality, and entertainment (Shaw 1998). Digital projection into domes, called "full dome projection", can be a technically challenging and expensive exercise, particularly for installation with a modest budget. Here we present an alternative full dome digital projection system, which consists of a single projector and a spherical mirror that scatter the light onto the dome surface. This approach offers many advantages over the fisheye lens alternatives, and results in a similar quality for just a fraction of costs.

The geology and mechanics of formation of the Fort Rock Dome, Yavapai County, Arizona

USGS Publications Warehouse

Fuis, Gary S.

1996-01-01

The Fort Rock Dome, a craterlike structure in northern Arizona, is the erosional product of a circular domal uplift associated with a Precambrian shear zone exposed within the crater and with Tertiary volcanism. A section of Precambrian to Quaternary rocks is described, and two Tertiary units, the Crater Pasture Formation and the Fort Rock Creek Rhyodacite, are named. A mathematical model of the doming process is developed that is consistent with the history of the Fort Rock Dome.

Temporal evolution of magma flow and degassing conditions during dome growth, insights from 2D numerical modeling

NASA Astrophysics Data System (ADS)

Chevalier, Laure; Collombet, Marielle; Pinel, Virginie

2017-03-01

Understanding magma degassing evolution during an eruption is essential to improving forecasting of effusive/explosive regime transitions at andesitic volcanoes. Lava domes frequently form during effusive phases, inducing a pressure increase both within the conduit and within the surrounding rocks. To quantify the influence of dome height on magma flow and degassing, we couple magma and gas flow in a 2D numerical model. The deformation induced by magma flow evolution is also quantified. From realistic initial magma flow conditions in effusive regime (Collombet, 2009), we apply increasing pressure at the conduit top as the dome grows. Since volatile solubility increases with pressure, dome growth is then associated with an increase in magma dissolved water content at a given depth, which corresponds with a decrease in magma porosity and permeability. Magma flow evolution is associated with ground deflation of a few μrad in the near field. However this signal is not detectable as it is hidden by dome subsidence (a few mrad). A Darcy flow model is used to study the impact of pressure and permeability conditions on gas flow in the conduit and surrounding rock. We show that dome permeability has almost no influence on magma degassing. However, increasing pressure in the surrounding rock, due to dome loading, as well as decreasing magma permeability in the conduit limit permeable gas loss at the conduit walls, thus causing gas pressurization in the upper conduit by a few tens of MPa. Decreasing magma permeability and increasing gas pressure increase the likelihood of magma explosivity and hazard in the case of a rapid decompression due to dome collapse.

Talar dome detection and its geometric approximation in CT: Sphere, cylinder or bi-truncated cone?

PubMed

Huang, Junbin; Liu, He; Wang, Defeng; Griffith, James F; Shi, Lin

2017-04-01

The purpose of our study is to give a relatively objective definition of talar dome and its shape approximations to sphere (SPH), cylinder (CLD) and bi-truncated cone (BTC). The "talar dome" is well-defined with the improved Dijkstra's algorithm, considering the Euclidean distance and surface curvature. The geometric similarity between talar dome and ideal shapes, namely SPH, CLD and BTC, is quantified. 50 unilateral CT datasets from 50 subjects with no pathological morphometry of tali were included in the experiments and statistical analyses were carried out based on the approximation error. The similarity between talar dome and BTC was more prominent, with smaller mean, standard deviation, maximum and median of the approximation error (0.36±0.07mm, 0.32±0.06mm, 2.24±0.47mm and 0.28±0.06mm) compare with fitting to SPH and CLD. In addition, there were significant differences between the fitting error of each pair of models in terms of the 4 measurements (p-values<0.05). The linear regression analyses demonstrated high correlation between CLD and BTC approximations (R 2 =0.55 for median, R 2 >0.7 for others). Color maps representing fitting error indicated that fitting error mainly occurred on the marginal regions of talar dome for SPH and CLD fittings, while that of BTC was small for the whole talar dome. The successful restoration of ankle functions in displacement surgery highly depends on the comprehensive understanding of the talus. The talar dome surface could be well-defined in a computational way and compared to SPH and CLD, the talar dome reflects outstanding similarity with BTC. Copyright © 2016 Elsevier Ltd. All rights reserved.

Technologies for precision manufacture of current and future windows and domes

NASA Astrophysics Data System (ADS)

Hallock, Bob; Shorey, Aric

2009-05-01

The final finish and characterization of windows and domes presents a number of challenges in achieving desired precision with acceptable cost and schedule. This becomes more difficult with advanced materials and as window and dome shapes and requirements become more complex, including acute angle corners, transmitted wavefront specifications, aspheric geometries and trending toward conformal surfaces. Magnetorheological Finishing (MRF®) and Magnetorheological Jet (MR Jet®), along with metrology provided by Sub-aperture Stitching Interferometry (SSI®) have several unique attributes that provide them advantages in enhancing fabrication of current and next generation windows and domes. The advantages that MRF brings to the precision finishing of a wide range of shapes such as flats, spheres (including hemispheres), cylinders, aspheres and even freeform optics, has been well documented. Recent advancements include the ability to finish freeform shapes up to 2-meters in size as well as progress in finishing challenging IR materials. Due to its shear-based removal mechanism in contrast to the pressure-based process of other techniques, edges are not typically rolled, in particular on parts with acute angle corners. MR Jet provides additional benefits, particularly in the finishing of the inside of steep concave domes and other irregular shapes. The ability of MR Jet to correct the figure of conformal domes deterministically and to high precision has been demonstrated. Combining these technologies with metrology techniques, such as SSI provides a solution for finishing current and future windows and domes in a reliable, deterministic and cost-effective way. The ability to use the SSI to characterize a range of shapes such as domes and aspheres, as well as progress in using MRF and MR Jet for finishing conventional and conformal windows and domes with increasing size and complexity of design will be presented.

Three-dimensional representations of salt-dome margins at four active strategic petroleum reserve sites.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Rautman, Christopher Arthur; Stein, Joshua S.

2003-01-01

Existing paper-based site characterization models of salt domes at the four active U.S. Strategic Petroleum Reserve sites have been converted to digital format and visualized using modern computer software. The four sites are the Bayou Choctaw dome in Iberville Parish, Louisiana; the Big Hill dome in Jefferson County, Texas; the Bryan Mound dome in Brazoria County, Texas; and the West Hackberry dome in Cameron Parish, Louisiana. A new modeling algorithm has been developed to overcome limitations of many standard geological modeling software packages in order to deal with structurally overhanging salt margins that are typical of many salt domes. Thismore » algorithm, and the implementing computer program, make use of the existing interpretive modeling conducted manually using professional geological judgement and presented in two dimensions in the original site characterization reports as structure contour maps on the top of salt. The algorithm makes use of concepts of finite-element meshes of general engineering usage. Although the specific implementation of the algorithm described in this report and the resulting output files are tailored to the modeling and visualization software used to construct the figures contained herein, the algorithm itself is generic and other implementations and output formats are possible. The graphical visualizations of the salt domes at the four Strategic Petroleum Reserve sites are believed to be major improvements over the previously available two-dimensional representations of the domes via conventional geologic drawings (cross sections and contour maps). Additionally, the numerical mesh files produced by this modeling activity are available for import into and display by other software routines. The mesh data are not explicitly tabulated in this report; however an electronic version in simple ASCII format is included on a PC-based compact disk.« less

Assessment of Effectiveness of Geologic Isolation Systems: REFERENCE SITE INITIAL ASSESSMENT FOR A SALT DOME REPOSITORY

DOE Office of Scientific and Technical Information (OSTI.GOV)

Harwell, M. A.; Brandstetter, A.; Benson, G. L.

1982-06-01

As a methodology demonstration for the Office of Nuclear Waste Isolation (ONWI), the Assessment of Effectiveness of Geologic Isolation Systems (AEGIS) Program conducted an initial reference site analysis of the long-term effectiveness of a salt dome repository. The Hainesville Salt Dome in Texas was chosen to be representative of the Gulf Coast interior salt domes; however, the Hainesville Site has been eliminated as a possible nuclear waste repository site. The data used for this exercise are not adequate for an actual assessment, nor have all the parametric analyses been made that would adequately characterize the response of the geosystem surroundingmore » the repository. Additionally, because this was the first exercise of the complete AEGIS and WASTE Rock Interaction Technology (WRIT) methodology, this report provides the initial opportunity for the methodology, specifically applied to a site, to be reviewed by the community outside the AEGIS. The scenario evaluation, as a part of the methodology demonstration, involved consideration of a large variety of potentially disruptive phenomena, which alone or in concert could lead to a breach in a salt dome repository and to a subsequent transport of the radionuclides to the environment. Without waste- and repository-induced effects, no plausible natural geologic events or processes which would compromise the repository integrity could be envisioned over the one-million-year time frame after closure. Near-field (waste- and repository-induced) effects were excluded from consideration in this analysis, but they can be added in future analyses when that methodology development is more complete. The potential for consequential human intrusion into salt domes within a million-year time frame led to the consideration of a solution mining intrusion scenario. The AEGIS staff developed a specific human intrusion scenario at 100 years and 1000 years post-closure, which is one of a whole suite of possible scenarios. This scenario resulted in the delivery of radionuclidecontaminated brine to the surface, where a portion was diverted to culinary salt for direct ingestion by the existing population. Consequence analyses indicated calculated human doses that would be highly deleterious. Additional analyses indicated that doses well above background would occur from such a scenario t even if it occurred a million years into the future. The way to preclude such an intrusion is for continued control over the repository sitet either through direct institutional control or through the effective passive transfer of information. A secondary aspect of the specific human intrusion scenario involved a breach through the side of the salt dome t through which radionuclides migrated via the ground-water system to the accessible environment. This provided a demonstration of the geotransport methodology that AEGIS can use in actual site evaluations, as well as the WRIT program's capabilities with respect to defining the source term and retardation rates of the radionuclides in the repository. This reference site analysis was initially published as a Working Document in December 1979. That version was distributed for a formal peer review by individuals and organizations not involved in its development. The present report represents a revisiont based in part on the responses received from the external reviewers. Summaries of the comments from the reviewers and responses to these comments by the AEGIS staff are presented. The exercise of the AEGIS methodology was sUGcessful in demonstrating the methodologyt and thus t in providing a basis for substantive peer review, in terms of further development of the AEGIS site-applications capability and in terms of providing insight into the potential for consequential human intrusion into a salt dome repository.« less

Assessment of Effectiveness of Geologic Isolation Systems: REFERENCE SITE INITIAL ASSESSMENT FOR A SALT DOME REPOSITORY

DOE Office of Scientific and Technical Information (OSTI.GOV)

Harwell, M. A.; Brandstetter, A.; Benson, G. L.

1982-06-01

As a methodology demonstration for the Office of Nuclear Waste Isolation (ONWI), the Assessment of Effectiveness of Geologic Isolation Systems (AEGIS) Program conducted an initial reference site analysis of the long-term effectiveness of a salt dome repository. The Hainesville Salt Dome in Texas was chosen to be representative of the Gulf Coast interior salt domes; however, the Hainesville Site has been eliminated as a possible nuclear waste repository site. The data used for this exercise are not adequate for an actual assessment, nor have all the parametric analyses been made that would adequately characterize the response of the geosystem surroundingmore » the repository. Additionally, because this was the first exercise of the complete AEGIS and WASTE Rock Interaction Technology (WRIT) methodology, this report provides the initial opportunity for the methodology, specifically applied to a site, to be reviewed by the community outside the AEGIS. The scenario evaluation, as a part of the methodology demonstration, involved consideration of a large variety of potentially disruptive phenomena, which alone or in concert could lead to a breach in a salt dome repository and to a subsequent transport of the radionuclides to the environment. Without waste- and repository-induced effects, no plausible natural geologic events or processes which would compromise the repository integrity could be envisioned over the one-million-year time frame after closure. Near-field (waste- and repository-induced) effects were excluded from consideration in this analysis, but they can be added in future analyses when that methodology development is more complete. The potential for consequential human intrusion into salt domes within a million-year time frame led to the consideration of a solution mining intrusion scenario. The AEGIS staff developed a specific human intrusion scenario at 100 years and 1000 years post-closure, which is one of a whole suite of possible scenarios. This scenario resulted in the delivery of radionuclidecontaminated brine to the surface, where a portion was diverted to culinary salt for direct ingestion by the existing population. Consequence analyses indicated calculated human doses that would be highly deleterious. Additional analyses indicated that doses well above background would occur from such a scenario t even if it occurred a million years into the future. The way to preclude such an intrusion is for continued control over the repository sitet either through direct institutional control or through the effective passive transfer of information. A secondary aspect of the specific human intrusion scenario involved a breach through the side of the salt dome t through which radionuclides migrated via the ground-water system to the accessible environment. This provided a demonstration of the geotransport methodology that AEGIS can use in actual site evaluations, as well as the WRIT program's capabilities with respect to defining the source term and retardation rates of the radionuclides in the repository. This reference site analysis was initially published as a Working Document in December 1979. That version was distributed for a formal peer review by individuals and organizations not involved in its development. The present report represents a revisiont based in part on the responses received from the external reviewers. Summaries of the comments from the reviewers and responses to these comments by the AEGIS staff are presented. The exercise of the AEGIS methodology was successful in demonstrating the methodologyt and thus t in providing a basis for substantive peer review, in terms of further development of the AEGIS site-applications capability and in terms of providing insight into the potential for consequential human intrusion into a salt dome repository.« less

Airborne tracking sunphotometer apparatus and system

NASA Technical Reports Server (NTRS)

Matsumoto, Yutaka (Inventor); Mina, Cesar (Inventor); Russell, Philip B. (Inventor); Vanark, William B. (Inventor)

1987-01-01

An airborne tracking Sun photometer apparatus has a rotatable dome. An azimuth drive motor is connected to rotate the dome. The dome has an equatorial slot. A cylindrical housing is pivotally mounted inside the dome at the equatorial slot. A photometer is mounted in the housing to move in the equatorial slot as the housing pivots. The photometer has an end facing from the slot with an optical flat transparent window. An elevation drive motor is connected to pivot the cylindrical housing. The rotatable dome is mounted in the bulkhead of an aircraft to extend from the interior of the aircraft. A Sun sensor causes the photometer to track the Sun automatically. Alternatively, the photometer may be oriented manually or by computer.

Base of fresh ground water, northern Louisiana Salt-Dome Basin and vicinity, northern Louisiana and southern Arkansas

USGS Publications Warehouse

Ryals, G.N.

1980-01-01

The National Waste Terminal Storage Program is an effort by the U.S. Department of Energy to locate and develop sites for disposal or storage of commercially produced radioactive wastes. As part of this program, salt domes in the northern Louisiana salt-dome basin are being studied to determine their suitability as repositories. Part of the U.S. Geological Survey 's participation in the program has been to describe the regional geohydrology of the northern Louisiana salt-dome basin. A map based on a compilation of published data and the interpretation of electrical logs shows the altitude of the base of freshwater in aquifers in the northern Louisiana salt-dome basin. (USGS)

Rheology of Lava Flows on Europa and the Emergence of Cryovolcanic Domes

NASA Technical Reports Server (NTRS)

Quick, Lynnae C.; Glaze, Lori S.; Baloga, Steve M.

2015-01-01

There is ample evidence that Europa is currently geologically active. Crater counts suggest that the surface is no more than 90 Myr old, and cryovolcanism may have played a role in resurfacing the satellite in recent geological times. Europa's surface exhibits many putative cryovolcanic features, and previous investigations have suggested that a number of domes imaged by the Galileo spacecraft may be volcanic in origin. Consequently, several Europa domes have been modeled as viscous effusions of cryolava. However, previous models for the formation of silicic domes on the terrestrial planets contain fundamental shortcomings. Many of these shortcomings have been alleviated in our new modeling approach, which warrants a re-assessment of the possibility of cryovolcanic domes on Europa.

Atmospheric Scintillation at Dome C, Antarctica: Implications for Photometryand Astrometry

NASA Astrophysics Data System (ADS)

Kenyon, S. L.; Lawrence, J. S.; Ashley, M. C. B.; Storey, J. W. V.; Tokovinin, A.; Fossat, E.

2006-06-01

We present low-resolution turbulence profiles of the atmosphere above Dome C, Antarctica, measured with the MASS instrument during 25 nights in 2004 March-May. Except for the lowest layer, Dome C has significantly less turbulence than Cerro Tololo and Cerro Pachón. In particular, the integrated turbulence at 16 km is always less than the median values at the two Chilean sites. From these profiles we evaluate the photometric noise produced by scintillation, and the atmospheric contribution to the error budget in narrow-angle differential astrometry. In comparison with the two midlatitude sites in Chile, Dome C offers a potential gain of about 3.6 in both photometric precision (for long integrations) and narrow-angle astrometry precision. These gain estimates are preliminary, being computed with average wind-speed profiles, but the validity of our approach is confirmed by independent data. Although the data from Dome C cover a fairly limited time frame, they lend strong support to expectations that Dome C will offer significant advantages for photometric and astrometric studies.

Applications of Cosmic Ray Muon Radiography

NASA Astrophysics Data System (ADS)

Guardincerri, E.; Durham, J. M.; Morris, C. L.; Rowe, C. A.; Poulson, D. C.; Bacon, J. D.; Plaud-Ramos, K.; Morley, D. J.

2015-12-01

The Dome of Santa Maria del Fiore, Florence Cathedral, was built between 1420 and 1436 by architect Filippo Brunelleschi and it is now cracking under its own weight. Engineering efforts are underway to model the dome's structure and reinforce it against further deterioration. According to some scholars, Brunelleschi might have built reinforcement structures into the dome itself; however, the only confirmed known subsurface reinforcement is a chain of iron and stone around the dome's base. Tomography with cosmic ray muons is a non-destructive imaging method that can be used to image the interior of the wall and therefore ascertain the layout and status of any iron substructure in the dome. We will show the results from a muon tomography measurement of iron hidden in a mockup of the dome's wall performed at Los Alamos National Lab in 2015. The sensitivity of this technique, and the status of this project will be also discussed. At last, we will show results on muon attenuation radiography of larger shallow targets.

Geohydrology of the northern Louisiana salt-dome basin pertinent to the storage of radioactive wastes; a progress report

USGS Publications Warehouse

Hosman, R.L.

1978-01-01

Salt domes in northern Louisiana are being considered as possible storage sites for nuclear wastes. The domes are in an area that received regional sedimentation through early Tertiary (Eocene) time with lesser amounts of Quaternary deposits. The Cretaceous-Tertiary accumulation is a few thousand feet thick; the major sands are regional aquifers that extend far beyond the boundaries of the salt-dome basin. Because of multiple aquifers, structural deformation, and variations in the hydraulic characteristics of cap rock, the ground-water hydrology around a salt dome may be highly complex. The Sparta Sand is the most productive and heavily used regional aquifer. It is either penetrated by or overlies most of the domes. A fluid entering the Sparta flow system would move toward one of the pumping centers, all at or near municipalities that pump from the Sparta. Movement could be toward surface drainage where local geologic and hydrologic conditions permit leakage to the surface or to a surficial aquifer. (Woodard-USGS)

Basis for the Induction of Tissue-Level Phase-2 Reentry as a Repolarization Disorder in the Brugada Syndrome

PubMed Central

Bueno-Orovio, Alfonso; Cherry, Elizabeth M.; Evans, Steven J.; Fenton, Flavio H.

2015-01-01

Aims. Human action potentials in the Brugada syndrome have been characterized by delayed or even complete loss of dome formation, especially in the right ventricular epicardial layers. Such a repolarization pattern is believed to trigger phase-2 reentry (P2R); however, little is known about the conditions necessary for its initiation. This study aims to determine the specific mechanisms that facilitate P2R induction in Brugada-affected cardiac tissue in humans. Methods. Ionic models for Brugada syndrome in human epicardial cells were developed and used to study the induction of P2R in cables, sheets, and a three-dimensional model of the right ventricular free wall. Results. In one-dimensional cables, P2R can be induced by adjoining lost-dome and delayed-dome regions, as mediated by tissue excitability and transmembrane voltage profiles, and reduced coupling facilitates its induction. In two and three dimensions, sustained reentry can arise when three regions (delayed-dome, lost-dome, and normal epicardium) are present. Conclusions. Not only does P2R induction by Brugada syndrome require regions of action potential with delayed-dome and lost-dome, but in order to generate a sustained reentry from a triggered waveback multiple factors are necessary, including heterogeneity in action potential distribution, tissue coupling, direction of stimulation, the shape of the late plateau, the duration of lost-dome action potentials, and recovery of tissue excitability, which is predominantly modulated by tissue coupling. PMID:26583094

Evaluating links between deformation, topography and surface temperature at volcanic domes: Results from a multi-sensor study at Volcán de Colima, Mexico

NASA Astrophysics Data System (ADS)

Salzer, Jacqueline T.; Milillo, Pietro; Varley, Nick; Perissin, Daniele; Pantaleo, Michele; Walter, Thomas R.

2017-12-01

Dome building activity is common at many volcanoes and due to the gravitational instability, a dome represents one of the most hazardous volcanic phenomena. Shallow volcanic processes as well as rheological and structural changes of the dome affecting the fluid transport have been linked to transitions in eruptive activity. Also, hydrothermal alteration may affect the structural integrity of the dome, increasing the potential for collapse. However, mapping the deformation and details of fluid escape at the summit of steep sloped volcanoes and integrating these with other types of data is challenging due to difficult access and poor coverage. Here we present for the first time the near-vertical and near-horizontal surface deformation field of a quiescent summit dome and the relationships with degassing and topographic patterns. Our results are derived from high resolution satellite radar interferometry (InSAR) time series based on a year of TerraSAR-X SpotLight acquisitions and Structure from Motion (SfM) processing of overflight infrared data at Volcán de Colima, Mexico. The identified deformation is dominated by localized heterogeneous subsidence of the summit dome exceeding rates of 15 cm/yr, and strongly decreasing over the year 2012, up to the renewal of explosive and extrusive activity in early 2013. We tentatively attribute the deformation to the degassing, cooling and contraction of the dome and shallow conduit material. We also find that the results strongly differ depending on the chosen InSAR time series method, which potentially overprints the true physical complexities of small scale, shallow deformation processes. The combined interpretation of the deformation and infrared data reveals a complex spatial relationship between the degassing pathways and the deformation. While we observe no deformation across the crater rim fumaroles, discontinuities in the deformation field are more commonly observed around the dome rim fumaroles and occasionally on the dome upper surface. We propose that the deformation pattern is also linked to processes controlling the fumarole formation and distribution (topography, permeability and volcanic activity), and the lack of direct relationships may be explained by how the influence of these processes varies across the volcanic summit. The presented work provides a new approach for safely monitoring the activity and stability of internal dome structures, as well as for constraining and validating models of dome degassing pathways and densification processes.

A taxonomy review of Oreoderus Burmeister, 1842 from China with a geometric morphometric evaluation (Coleoptera, Scarabaeidae, Valgini)

PubMed Central

Li, Sha; Ricchiardi, Enrico; Bai, Ming; Yang, Xingke

2016-01-01

Abstract The species of the genus Oreoderus are morphologically similar, and can be challenging to distinguish without dissecting the male genitalia. In this study, the Oreoderus species from China are reviewed. Three new species of Oreoderus are described: Oreoderus dasystibialis Li & Yang, sp. n., Oreoderus brevitarsus Li & Yang, sp. n. and Oreoderus oblongus Li & Yang, sp. n. A key of the male Oreoderus and a distribution map are provided. Oreoderus coomani Paulian, 1961 was found as a new record in China. The first description of the female of Oreoderus arrowi Ricchiardi, 2001 is provided. Oreoderus humeralis Gestro, 1891, Oreoderus quadricarinatus Arrow, 1944, Oreoderus crassipes Arrow, 1944, and Oreoderus momeitensis Arrow, 1910 are excluded from the Chinese fauna. Furthermore, we utilize geometric morphometric approaches (GM) to analyze the shape variation of four characters (pronotum, elytra, protibia and aedeagus) in Oreoderus. The morphological variations of Oreoderus and the taxonomic value of each character are discussed. The combined analysis of geometric morphometrics and comparative morphology support recognition of the three new species. PMID:26865816

Statistical Analysis of Organ Morphometric Parameters and Weights in South Iranian Adult Autopsies.

PubMed

Gholamzadeh, Saeid; Zarenezhad, Mohammad; Montazeri, Mahmoud; Zareikordshooli, Marzieh; Sadeghi, Ghazaleh; Malekpour, Abdorrasoul; Hoseni, Sanaz; Bahrani, Mohammadreza; Hajatmand, Razieh

2017-05-01

Organ weight is one important indicator to discern normal from abnormal condition in forensic pathology as well as in clinical medicine. The present study aimed to investigate morphometric parameters and organ weights of southern Iranian adults, which can be fundamental sources to be compared to abnormal cases.Morphometric parameters and weights of 6 organs (heart, liver, kidney, spleen, appendix, and brain), which were harvested from 501 southern Iranian adults (385 males and 116 females) during ordinary postmortem examination, were measured.All the organs were heavier in males than in females. Heart, brain, spleen, and right kidney were significantly heavier in males compared to females, but no significant difference was observed between the 2 sexes regarding the weights of the rest of the organs. Moreover, brain and heart became heavier as one got older and most organs were heavier in middle-aged individuals compared to other age groups. Furthermore, various types of correlations were observed between different organs' weights and body parameters.These results can be useful anatomical data for autopsy investigations, clinical practices, and research in southern Iran.

Crustal and upper mantle structure of the Hangay Dome, central Mongolia

NASA Astrophysics Data System (ADS)

Stachnik, J. C.; Meltzer, A.; Tsaagan, B.; Munkhuu, U.; Russo, R.; Souza, S.; Martin, P.

2013-12-01

The origin and support of high topography within continental interiors away from active tectonic margins remains a fundamental question in the dynamics and deformation of continents. The Hangay Dome in central Mongolia is one such region that is a broad regional uplift with average elevation of about 2 km, sitting between two large strike-slip faults, the Bulnay Fault to the north and the Gobi-Altay Fault to the south. Both of these faults are seismically active and have experienced M8+ earthquakes as recently as 1957. This portion of the Mongolian Plateau is approximately 300 km south of the Baikal Rift and located at the northern margin of the diffuse-deformation field in Central Asia, adjacent to the Siberian Craton. From previous research, the dynamic support of the Hangay Dome has been attributed to both crustal thickening and low density upper mantle material. However, seismic data leading to these interpretations have been limited to global tomographic models and sparse regional sampling of the wave field leaving the question unresolved. To address this major question in plate tectonic theory, in June 2012 a temporary IRIS/PASSCAL/University of Florida array of 72 seismic stations was deployed around the Hangay Dome to determine lithospheric structure in the region. Preliminary results from the first of two years of data are shown from receiver function analysis, ambient noise surface wave tomography, and teleseismic travel time residual analysis. Using teleseismic waveform records from over 300 earthquakes above M5.5 between 30 and 90 degrees epicentral distance, crustal thickness measurements from H-k stacking of receiver functions range from 42 km to 57 km across the array, with thicker crust beneath the highest topography. At each station the bulk crustal Vp/Vs ratio is also determined with median value for the array of 1.77, perhaps indicating a more mafic composition crust in the region.Teleseismic P-wave travel time residuals generally diminish from south to north across the array consistent with thinning crust, however the depth resolution and magnitude of seismic wavespeed anomalies will be further explored with three-dimensional finite-frequency tomography. Constraints on crustal shear wave velocity from ambient noise surface wave tomography complement both the receiver function analysis and teleseismic tomography. Initial inversions of phase velocity dispersion curves in the central Hangay indicate an average crustal Vs of 3.6 km/s within the Hangay Dome, which translates to an average Vp of 6.4 km/s using Vp/Vs of 1.77. Further refinement of current analysis and an additional year of recording will reveal the first high resolution lithospheric scale model in the region.

Morphometric and molecular differentiation between quetzal subspecies of Pharomachrus mocinno (Trogoniformes: Trogonidae).

PubMed

Solórzano, Sofía; Oyama, Ken

2010-03-01

The resplendent Quetzal (Pharomachrus mocinno) is an endemic Mesoamerican bird species of conservation concern. Within this species, the subspecies P. m. costaricensis and P. m. mocinno, have been recognized by apparent morphometric differences; however, presently there is no sufficient data for confirmation. We analyzed eight morphometric attributes of the body from 41 quetzals: body length, tarsus and cord wing, as well as the length, wide and depth of the bill, body weight; and in the case of the males, the length of the long upper-tail cover feathers. We used multivariate analyses to discriminate morphometric differences between subspecies and contrasted each morphometric attribute between and within subspecies with paired non-parametric Wilcoxon test. In order to review the intraspecific taxonomic status of this bird, we added phylogenetic analysis, and genetic divergence and differentiation based on nucleotide variations in four sequences of mtDNA. The nucleotide variation was estimated in control region, subunit NDH6, and tRNAGlu and tRNAPhe in 26 quetzals from eight localities distributed in five countries. We estimated the genetic divergence and differentiation between subspecies according to a mutation-drift equilibrium model. We obtained the best mutation nucleotide model following the procedure implemented in model test program. We constructed the phylogenetic relationships between subspecies by maximum parsimony and maximum likelihood using PAUP, as well as with Bayesian statistics. The multivariate analyses showed two different morphometric groups, and individuals clustered according to the subspecies that they belong. The paired comparisons between subspecies showed strong differences in most of the attributes analyzed. Along the four mtDNA sequences, we identified 32 nucleotide positions that have a particular nucleotide according to the quetzals subspecies. The genetic divergence and the differentiation was strong and markedly showed two groups within P. mocinno that corresponded to the quetzals subspecies. The model selected for our data was TVM+G. The three phylogenetic methods here used recovered two clear monophyletic clades corresponding to each subspecies, and evidenced a significant and true partition of P. mocinno species into two different genetic, morphometric and ecologic groups. Additionally, according to our calculations, the gene flow between subspecies is interrupted at least from three million years ago. Thus we propose that P. mocinno be divided in two independent species: P. mocinno (Northern species, from Mexico to Nicaragua) and in P. costaricensis (Southern species, Costa Rica and Panama). This new taxonomic classification of the quetzal subspecies allows us to get well conservation achievements because the evaluation about the kind and magnitude of the threats could be more precise.

Experimental and petrological constraints on long-term magma dynamics and post-climactic eruptions at the Cerro Galán caldera system, NW Argentina

NASA Astrophysics Data System (ADS)

Grocke, Stephanie B.; Andrews, Benjamin J.; de Silva, Shanaka L.

2017-11-01

Cerro Galán in NW Argentina records > 3.5 Myr of magmatic evolution of a major resurgent caldera complex. Beginning at 5.72 Ma, nine rhyodacitic ignimbrites (68-71 wt% SiO2) with a combined minimum volume of > 1200 km3 (Dense Rock Equivalent; DRE) have been erupted. The youngest of those ignimbrites is the eponymous, geochemically homogenous, caldera-forming 2.08 ± 0.02 Ma Cerro Galán Ignimbrite (CGI; > 630 km3 DRE). Following this climactic supereruption, structural and magmatic resurgence led to the formation of a resurgent dome and post-climactic lava domes and their associated pyroclastic deposits. A clear transition from amphibole to sanidine-bearing magmas occurred during the evolution of Cerro Galán and is inferred to represent a shallowing of the magma system. We test this hypothesis here using experimental phase equilibria. We conducted a series of phase equilibria experiments on the post-climactic dome lithologies under H2O-saturated conditions using cold seal Waspaloy pressure vessels with an intrinsic log fO2 of NNO + 1 ± 0.5 across a temperature-pressure range of 750-900 °C and 50-200 MPa (PH2O = Ptotal), respectively. Petrologic and geochemical analysis of the post-climactic lithologies shows that the natural phase assemblage (plagioclase + quartz + biotite + sanidine + Fe-Ti oxides ± apatite ± zircon) is stable at < 50 MPa (PH2O) and 805-815 °C. Applying experimental results to the CGI pumice, which has the same phenocryst phase assemblage and modal abundance, whole rock and phenocryst chemistry, and overlapping temperature and fO2 as the post-climactic deposits, suggests that these pre-eruptive conditions (PH2O < 50 MPa) are relevant for the magmas that sourced the climactic CGI supereruption as well. Amphibole in the early Cerro Galán ignimbrites (Toconquis Group; 5.72-4.51 Ma, and the Cueva Negra Ignimbrite, 3.77 ± 0.08 Ma) records crystallization across a range of pressures (500 to 200 ± 60 MPa). In the interval between the eruption of the Cueva Negra ignimbrite and the CGI (2.08 ± 0.02 Ma) the complex magma system shallowed and stalled at low pressures (< 100 MPa), resulting in a more simple magma reservoir configuration represented by a large-volume, geochemically homogenous magma body. The shallowing of the Cerro Galán magma system during this time explains the marked transition from amphibole to sanidine-bearing magmas and seems to characterize many large silicic caldera-forming magma systems that erupt over million year timescales to generate long-lived volcanic complexes. The post-climactic history of Cerro Galán is informed through a detailed investigation of the textural differences among the post-climactic dome lithologies, and a comparison of those textures with previously published decompression experiments. These suggest that the highly vesiculated, pumiceous clasts with rare microlites represent magma stored within the core of the lava dome that decompressed relatively rapidly (0.003-0.0003 MPa s-1) and evolved via closed system degassing. Resulting over-pressure of the dome may have triggered superficial explosion. In contrast, dense clasts with abundant crystalline silica precipitates represent more typical dome-forming magmas that decompressed more slowly (< 0.00005 MPa s-1), evolved via open system degassing, and form the outer carapace of a lava dome. Integrating decompression histories with results from new phase equilibria experiments suggests that during post-climactic volcanic activity at Cerro Galán, remnant CGI dome-forming magmas ascended from the shallow magma reservoir (< 4 km) to motivate resurgent uplift and erupt as lava domes either explosively as vesiculated clasts or effusively as dense clasts that make up the outer structure of lava domes.

Development of in-structure design spectra for dome mounted equipment on underground waste storage tanks at the Hanford Site

DOE Office of Scientific and Technical Information (OSTI.GOV)

Julyk, L.J.

1995-09-01

In-structure response spectra for dome mounted equipment on underground waste storage tanks at the Hanford Site are developed on the basis of recent soil-structure-interaction analyses. Recommended design spectra are provided for various locations on the tank dome.

The SOAR Telescope Project Southern Observatory for Astronomical Research (SOAR)

DTIC Science & Technology

2003-03-21

completed SOAR dome and facility. 2. Dome The preliminary design of the dome was handled by M3 (US). A Brazilian firm, Equatorial Sistemas led the...for the Gemini Telescope during construction, now Project Manager at the National Solar Observatory • Robert Shelton, Provost of the University on

Unique dome design for the SOAR telescope project

NASA Astrophysics Data System (ADS)

Teran, Jose U.; Porter, David S.; Hileman, Edward A.; Neff, Daniel H.

2000-08-01

The SOAR telescope dome is a 20 meter diameter 5/8 spherical structure built on a rotating steel frame with an over the top nesting shutter and covered with a fiberglass panel system. The insulated fiberglass panel system can be self- supporting and is typically used for radomes on ground based tracking systems. The enclosed observing area is ventilated using a down draft ventilation system. The rotating steel frame is comprised of a ring beam and dual arch girders to provide support to the panel system sections and guide the shutter. The dual door shutter incorporates a unique differential drive system that reduces the complexity of the control system. The dome, shutter and windscreen `track' the telescope for maximum wind protection. The dome rotates on sixteen fixed compliant bogie assemblies. The dome is designed for assembly in sections off the facility and lifted into place for minimal impact on assembly of other telescope systems. The expected cost of the complete dome; including structure, drives, and controls is under 1.7 million. The details covered in this paper are the initial trade-offs and rationale required by SOAR to define the dome, the detailed design performed by M3 Engineering and Technology, and the choices made during the design.

Tephra layers in the Siple Dome and Taylor Dome ice cores, Antarctica: Sources and correlations

NASA Astrophysics Data System (ADS)

Dunbar, Nelia W.; Zielinski, Gregory A.; Voisins, Daniel T.

2003-08-01

Volcanic ash, or tephra layers, are found in the Taylor Dome, Siple Dome A, and Siple Dome B ice cores. Significant shard concentrations are found at a number of depths in all three cores. Electron and ion microprobe analyses indicate that the geochemical composition of most layers is basaltic, basanitic, or trachytic, and the geochemical signatures of the layers suggest derivation from the Pleiades volcanic center, Mt. Melbourne volcano, or small mafic centers, probably in the Royal Society Range area. Presence of tephra layers suggests an episode of previously unrecognized Antarctic volcanic activity between 1776 and 1805 A.D., from at least two volcanic centers. A strong geochemical correlation (D = 3.49 and 3.97 with a value of 4 considered identical) is observed between tephra layers at depth of 79.2 m in the Taylor Dome ice core, and layers between 97.2 and 97.7 m depth in the Siple B core. This correlation, and the highly accurate depth-age scale of the Siple B core suggest that the age of this horizon in the Taylor Dome ice core presented by [1998a, 2000] should be revised downward, to the younger age of 675 ± 25 years before 1995. This revised chronology is consistent with vertical strain measurements presented by [2003].

Morphological and morphometric analysis of scutella of six species and two subspecies of Triatoma (Hemiptera: Reduviidae) in Mexico.

PubMed

Rivas, Nancy; Sánchez-Cordero, Víctor; Camacho, Alejandro D; Córdoba-Aguilar, Alejandro; Alejandre-Aguilar, Ricardo

2017-12-01

Morphological characters can be used to distinguish the vast majority of triatomine species, but the existence of high levels of phenotypic plasticity and recently diverged species can lead to erroneous determinations. To approach this problem, we analyzed the male and female morphologies of the scutella of Triatoma barberi, T. dimidiata, T. lecticularia, T. mexicana, T. recurva, T. rubida, and two sub-species, T. protracta protracta and T. protracta nahuatlae. Scutellum samples were observed by scanning electron microscopy and subjected to morphological analysis and morphometric investigation using a canonical discriminant analysis. The results revealed differences primarily in central depression shape, posterior process, and vestiture. We observed clear dimension-based differences in scutellum morphometry in all the taxa under study, providing sound evidence for species and subspecies differentiation. On the other hand, there is no difference between sexes in T. lecticularia, T. protracta protracta, and T. protracta nahuatlae. Our methodology can be implemented to differentiate species of the genus Triatoma. © 2017 The Society for Vector Ecology.

Optimized Heart Sampling and Systematic Evaluation of Cardiac Therapies in Mouse Models of Ischemic Injury: Assessment of Cardiac Remodeling and Semi-Automated Quantification of Myocardial Infarct Size.

PubMed

Valente, Mariana; Araújo, Ana; Esteves, Tiago; Laundos, Tiago L; Freire, Ana G; Quelhas, Pedro; Pinto-do-Ó, Perpétua; Nascimento, Diana S

2015-12-02

Cardiac therapies are commonly tested preclinically in small-animal models of myocardial infarction. Following functional evaluation, post-mortem histological analysis is essential to assess morphological and molecular alterations underlying the effectiveness of treatment. However, non-methodical and inadequate sampling of the left ventricle often leads to misinterpretations and variability, making direct study comparisons unreliable. Protocols are provided for representative sampling of the ischemic mouse heart followed by morphometric analysis of the left ventricle. Extending the use of this sampling to other types of in situ analysis is also illustrated through the assessment of neovascularization and cellular engraftment in a cell-based therapy setting. This is of interest to the general cardiovascular research community as it details methods for standardization and simplification of histo-morphometric evaluation of emergent heart therapies. © 2015 by John Wiley & Sons, Inc. Copyright © 2015 John Wiley & Sons, Inc.

Police witness identification images: a geometric morphometric analysis.

PubMed

Hayes, Susan; Tullberg, Cameron

2012-11-01

Research into witness identification images typically occurs within the laboratory and involves subjective likeness and recognizability judgments. This study analyzed whether actual witness identification images systematically alter the facial shapes of the suspects described. The shape analysis tool, geometric morphometrics, was applied to 46 homologous facial landmarks displayed on 50 witness identification images and their corresponding arrest photographs, using principal component analysis and multivariate regressions. The results indicate that compared with arrest photographs, witness identification images systematically depict suspects with lowered and medially located eyebrows (p = <0.000001). This was found to occur independently of the Police Artist, and did not occur with composites produced under laboratory conditions. There are several possible explanations for this finding, including any, or all, of the following: The suspect was frowning at the time of the incident, the witness had negative feelings toward the suspect, this is an effect of unfamiliar face processing, the suspect displayed fear at the time of their arrest photograph. © 2012 American Academy of Forensic Sciences.

Puma (Puma concolor) epididymal sperm morphometry

PubMed Central

Cucho, Hernán; Alarcón, Virgilio; Ordóñez, César; Ampuero, Enrique; Meza, Aydee; Soler, Carles

2016-01-01

The Andean puma (Puma concolor) has not been widely studied, particularly in reference to its semen characteristics. The aim of the present study was to define the morphometry of puma sperm heads and classify their subpopulations by cluster analysis. Samples were recovered postmortem from two epididymides from one animal and prepared for morphological observation after staining with the Hemacolor kit. Morphometric data were obtained from 581 spermatozoa using a CASA-Morph system, rendering 13 morphometric parameters. The principal component (PC) analysis was performed followed by cluster analysis for the establishment of subpopulations. Two PC components were obtained, the first related to size and the second to shape. Three subpopulations were observed, corresponding to elongated and intermediate-size sperm heads and acrosomes, to large heads with large acrosomes, and to small heads with short acrosomes. In conclusion, puma spermatozoa showed no uniform sperm morphology but three clear subpopulations. These results should be used for future work in the establishment of an adequate germplasm bank of this species. PMID:27678466

Puma (Puma concolor) epididymal sperm morphometry.

PubMed

Cucho, Hernán; Alarcón, Virgilio; Ordóñez, César; Ampuero, Enrique; Meza, Aydee; Soler, Carles

2016-01-01

The Andean puma (Puma concolor) has not been widely studied, particularly in reference to its semen characteristics. The aim of the present study was to define the morphometry of puma sperm heads and classify their subpopulations by cluster analysis. Samples were recovered postmortem from two epididymides from one animal and prepared for morphological observation after staining with the Hemacolor kit. Morphometric data were obtained from 581 spermatozoa using a CASA-Morph system, rendering 13 morphometric parameters. The principal component (PC) analysis was performed followed by cluster analysis for the establishment of subpopulations. Two PC components were obtained, the first related to size and the second to shape. Three subpopulations were observed, corresponding to elongated and intermediate-size sperm heads and acrosomes, to large heads with large acrosomes, and to small heads with short acrosomes. In conclusion, puma spermatozoa showed no uniform sperm morphology but three clear subpopulations. These results should be used for future work in the establishment of an adequate germplasm bank of this species.

landforms evolution in collisional-dominated settings: the case of Northern Sicily (Central Mediterranean)

NASA Astrophysics Data System (ADS)

Nigro, Fabrizio; Renda, Pietro; Favara, Rocco

2010-05-01

In the young mountain chains underwent to emersion, the different crustal blocks which compose the belt may be subjected to differentiate tilting during uplift. The tilting process may be revealed both by the stratal pattern of the syn-uplifting deposits or deduced by the function altitude/area ratio. The prevailing of the uplift rate with respect to the tilting rate (and vice versa) result from the shape of this function. So, in young mountains the hypsometric analysis may results a useful tool for decipher how the crustal blocks are underwent to uplift. An integrate analysis based on stratigraphy, structural and morphometric data represents the correctly approach for characterise the landform evolution in regions underwent to active tectonics. In the aim to evaluate the recent tectonic history from topography in regions underwent to active deformations, by deducing the effect of tectonisms on landforms, the definition of the boundary conditions (regarding the crustal deformation) is fundamental for morphometric analysis. In fact, the morphologic style and the morphometric pattern in tectonically active settings are closely related to the dominance of rock masses exceeding for uplift (or failure for subsidence) with respect to the exogenous erosional processes. Collisional geodynamic processes induce crustal growth for faulting and folding. In this earth's sectors, the uplift of crustal blocks is a very common effect of compressional deformation. It reflects for example fold amplification and thrusting, but it is a very common process also in settings dominated by crustal thinning, where the viscoelastic properties of the lithosphere induce tilting and localised uplift of normal-faulted crustal blocks. The uplift rate is rarely uniform for wide areas within the orogens on the passive margins, but it changes from adjacent crustal blocks as the effect of space-variation of kinematics conditions or density. It also may change within a single block, as the effect of tilting, which induces synchronously mass elevation and subsidence. Not considering sea-level fluctuations and the climatic-lithologic parameters, the 2D distribution of uplift rate influences the landmass evolution in time. The tendency of rock masses to equilibrium resulting from concurrent tectonic building and denudation forces defines the geomorphic cycle. This evolution is checked by different stages, each characterised by a well-recognisable morphometric patterns. The dominance of uplift or erosion and concurrent block tilting induce characteristic a landform evolution tendency, which may be evaluated with the morphometric analysis. A lot of morphometric functions describe the equilibrium stage of landmasses, providing useful tools for deciphering how tectonics acts in typology (e.g. inducing uplift uniformly or with crustal block tilting) and resulting effects on landforms (magnitude of uplift rate vs tilting rate). We aim to contribute in the description of landforms evolution in Sicily (Central Mediterranean) under different morphoevolutive settings, where may prevails uplift, tilting or erosion, each characterised by different morphometric trends. The present-day elevation of Pliocene to upper Pleistocene deposits suggests that Northen Sicily underwent neotectonic uplift. The recent non-uniform uplift of Northern Sicily coastal sector is suggested by the different elevation of the Pliocene-Upper Pleistocene marine deposits. The maximum uplift rate characterise the NE Sicily and the minimum the NW Sicily. The overall westwards decreasing trend of uplift is in places broken in the sectors where are located a lot of morphostructures. Localised uplift rates higher than the adjacent coastal plains are suggested by the present-day elevation of the beachshore deposits of Tyrrhenian age. Northern Sicily may be divided into a lot of crustal blocks, underwent to different tilting and uplift rates. Accentuate tilting and uplift results from transtensional active faulting of the already emplaced chain units, as also suggested by seismicity and the focal plane solutions of recent strong earthquakes.

Malignant Brenner tumor. A histologic, morphometrical, immunohistochemical, and ultrastructural study.

PubMed

Seldenrijk, C A; Willig, A P; Baak, J P; Kühnel, R; Rao, B R; Burger, C W; van der Harten, J J; Dijkhuizen, G H; Meijer, C J

1986-08-01

The histologic, morphometric, immunohistochemical, and ultrastructural study of a malignant Brenner tumor in a postmenopausal women presenting with vaginal bleeding is described. A comparison with transitional cell carcinomas is made, and the use of morphometry in grading the urothelial-like epithelium in malignant Brenner tumors is suggested. High preoperative urinary estrogen, low serum luteinizing hormone (LH) and follicle-stimulating hormone (FSH) levels and histologically confirmed atypical endometrial hyperplasia suggested a hyperestrogenism. The reduction in urinary estrogen and the increase in serum LH and FSH after tumor removal and the presence of aromatase activity detected in tumor microsomes confirmed that the tumor was synthesizing estrogen. Estrogen receptors were undetectable both by biochemical and histochemical analysis in the tumor.

Morphometric comparisons of Diaphorina citri (Hemiptera: Liviidae) populations from Iran, USA and Pakistan

PubMed Central

Lashkari, Mohammadreza; Hentz, Matthew G.

2015-01-01

The Asian citrus psyllid (ACP), Diaphorina citri Kuwayama (Hemiptera: Liviidae), vector of citrus greening disease pathogen, Huanglongbing (HLB), is considered the most serious pest of citrus in the world. Prior molecular based studies have hypothesized a link between the D. citri in Iran and the USA (Florida). The purpose of this study was to collect morphometric data from D. citri populations from Iran (mtCOI haplotype-1), Florida (mtCOI haplotype-1), and Pakistan (mtCOI haplotype-6), to determine whether different mtCOI haplotypes have a relationship to a specific morphometric variation. 240 samples from 6 ACP populations (Iran—Jiroft, Chabahar; Florida—Ft. Pierce, Palm Beach Gardens, Port St. Lucie; and Pakistan—Punjab) were collected for comparison. Measurements of 20 morphological characters were selected, measured and analysed using ANOVA and MANOVA. The results indicate differences among the 6 ACP populations (Wilks’ lambda = 0.0376, F = 7.29, P < 0.0001). The body length (BL), circumanal ring length (CL), antenna length (AL), forewing length (WL) and Rs vein length of forewing (RL) were the most important characters separating the populations. The cluster analysis showed that the Iran and Florida populations are distinct from each other but separate from the Pakistan population. Thus, three subgroups can be morphologically discriminated within D. citri species in this study, (1) Iran, (2) USA (Florida) and (3) Pakistan population. Morphometric comparisons provided further resolution to the mtCOI haplotypes and distinguished the Florida and Iranian populations. PMID:26038715

Morphometric comparisons of Diaphorina citri (Hemiptera: Liviidae) populations from Iran, USA and Pakistan.

PubMed

Lashkari, Mohammadreza; Hentz, Matthew G; Boykin, Laura M

2015-01-01

The Asian citrus psyllid (ACP), Diaphorina citri Kuwayama (Hemiptera: Liviidae), vector of citrus greening disease pathogen, Huanglongbing (HLB), is considered the most serious pest of citrus in the world. Prior molecular based studies have hypothesized a link between the D. citri in Iran and the USA (Florida). The purpose of this study was to collect morphometric data from D. citri populations from Iran (mtCOI haplotype-1), Florida (mtCOI haplotype-1), and Pakistan (mtCOI haplotype-6), to determine whether different mtCOI haplotypes have a relationship to a specific morphometric variation. 240 samples from 6 ACP populations (Iran-Jiroft, Chabahar; Florida-Ft. Pierce, Palm Beach Gardens, Port St. Lucie; and Pakistan-Punjab) were collected for comparison. Measurements of 20 morphological characters were selected, measured and analysed using ANOVA and MANOVA. The results indicate differences among the 6 ACP populations (Wilks' lambda = 0.0376, F = 7.29, P < 0.0001). The body length (BL), circumanal ring length (CL), antenna length (AL), forewing length (WL) and Rs vein length of forewing (RL) were the most important characters separating the populations. The cluster analysis showed that the Iran and Florida populations are distinct from each other but separate from the Pakistan population. Thus, three subgroups can be morphologically discriminated within D. citri species in this study, (1) Iran, (2) USA (Florida) and (3) Pakistan population. Morphometric comparisons provided further resolution to the mtCOI haplotypes and distinguished the Florida and Iranian populations.

Subregional Shape Alterations in the Amygdala in Patients with Panic Disorder.

PubMed

Yoon, Sujung; Kim, Jieun E; Kim, Geon Ha; Kang, Hee Jin; Kim, Bori R; Jeon, Saerom; Im, Jooyeon Jamie; Hyun, Heejung; Moon, Sohyeon; Lim, Soo Mee; Lyoo, In Kyoon

2016-01-01

The amygdala has been known to play a pivotal role in mediating fear-related responses including panic attacks. Given the functionally distinct role of the amygdalar subregions, morphometric measurements of the amygdala may point to the pathophysiological mechanisms underlying panic disorder. The current study aimed to determine the global and local morphometric alterations of the amygdala related to panic disorder. Volumetric and surface-based morphometric approach to high-resolution three-dimensional T1-weighted images was used to examine the structural variations of the amygdala, with respect to extent and location, in 23 patients with panic disorder and 31 matched healthy individuals. There were no significant differences in bilateral amygdalar volumes between patients with panic disorder and healthy individuals despite a trend-level right amygdalar volume reduction related to panic disorder (right, β = -0.23, p = 0.09, Cohen's d = 0.51; left, β = -0.18, p = 0.19, Cohen's d = 0.45). Amygdalar subregions were localized into three groups including the superficial, centromedial, and laterobasal groups based on the cytoarchitectonically defined probability map. Surface-based morphometric analysis revealed shape alterations in the laterobasal and centromedial groups of the right amygdala in patients with panic disorder (false discovery rate corrected p < 0.05). The current findings suggest that subregion-specific shape alterations in the right amygdala may be involved in the development and maintenance of panic disorder, which may be attributed to the cause or effects of amygdalar hyperactivation.

Subregional Shape Alterations in the Amygdala in Patients with Panic Disorder

PubMed Central

Kim, Geon Ha; Kang, Hee Jin; Kim, Bori R.; Jeon, Saerom; Im, Jooyeon Jamie; Hyun, Heejung; Moon, Sohyeon; Lim, Soo Mee; Lyoo, In Kyoon

2016-01-01

Background The amygdala has been known to play a pivotal role in mediating fear-related responses including panic attacks. Given the functionally distinct role of the amygdalar subregions, morphometric measurements of the amygdala may point to the pathophysiological mechanisms underlying panic disorder. The current study aimed to determine the global and local morphometric alterations of the amygdala related to panic disorder. Methods Volumetric and surface-based morphometric approach to high-resolution three-dimensional T1-weighted images was used to examine the structural variations of the amygdala, with respect to extent and location, in 23 patients with panic disorder and 31 matched healthy individuals. Results There were no significant differences in bilateral amygdalar volumes between patients with panic disorder and healthy individuals despite a trend-level right amygdalar volume reduction related to panic disorder (right, β = -0.23, p = 0.09, Cohen's d = 0.51; left, β = -0.18, p = 0.19, Cohen's d = 0.45). Amygdalar subregions were localized into three groups including the superficial, centromedial, and laterobasal groups based on the cytoarchitectonically defined probability map. Surface-based morphometric analysis revealed shape alterations in the laterobasal and centromedial groups of the right amygdala in patients with panic disorder (false discovery rate corrected p < 0.05). Conclusions The current findings suggest that subregion-specific shape alterations in the right amygdala may be involved in the development and maintenance of panic disorder, which may be attributed to the cause or effects of amygdalar hyperactivation. PMID:27336300

Liver transplantation in man: morphometric analysis of the parenchymal alterations following cold ischaemia and warm ischaemia/reperfusion

PubMed Central

VIZZOTTO, LAURA; VERTEMATI, MAURIZIO; DEGNA, CARLO TOMMASINI; ASENI, PAOLO

2001-01-01

Ischaemia and reperfusion phases represent critical events during liver transplantation. The purpose of this study was to describe morphological alterations of both vascular and parenchymal compartments after ischaemia and reperfusion and to evaluate the possible relationship between morphometric parameters and biochemical/clinical data. Three needle biopsies were drawn from 20 patients who underwent orthotopic liver transplantation. The first biopsy was taken before flushing with preservation solution, and the second and the third to evaluate respectively the effects of cold ischaemia and of warm ischaemia/reperfusion. Biopsies were examined by an image analyser and morphometric parameters related to the liver parenchyma were evaluated. At the second biopsy we observed a decrease of the endothelium volume fraction while the same parameter referred to the sinusoidal lumen achieved a peak value. The hepatocytes showed a lower surface parenchymal/vascular sides ratio. This parameter was reversed at the end of the reperfusion phase; furthermore the third biopsy revealed endothelial swelling and a decreased volume fraction of the sinusoidal lumen. The results quantify the damage to the sinusoidal bed which, as already known, is one of the main targets of cold ischaemia; warm ischaemia and reperfusion accentuate endothelial damage. The end of transplantation is characterised by damage chiefly to parenchymal cells. Hepatocytes show a rearrangement of their surface sides, probably related to the alterations of the sinusoidal bed. In addition, the fluctuations of morphometric parameters during ischaemia/reperfusion correlate positively with biochemical data and clinical course of the patients. PMID:11430699

Nuclear morphometry in histological specimens of canine prostate cancer: Correlation with histological subtypes, Gleason score, methods of collection and survival time.

PubMed

Di Donato, Guido; Laufer-Amorim, Renée; Palmieri, Chiara

2017-10-01

Ten normal prostates, 22 benign prostatic hyperplasia (BPH) and 29 prostate cancer (PC) were morphometrically analyzed with regard to mean nuclear area (MNA), mean nuclear perimeter (MNP), mean nuclear diameter (MND), coefficient of variation of the nuclear area (NACV), mean nuclear diameter maximum (MDx), mean nuclear diameter minimum (MDm), mean nuclear form ellipse (MNFe) and form factor (FF). The relationship between nuclear morphometric parameters and histological type, Gleason score, methods of sample collection, presence of metastases and survival time of canine PC were also investigated. Overall, nuclei from neoplastic cells were larger, with greater variation in nuclear size and shape compared to normal and hyperplastic cells. Significant differences were found between more (small acinar/ductal) and less (cribriform, solid) differentiated PCs with regard to FF (p<0.05). MNA, MNP, MND, MDx, and MDm were significantly correlated with the Gleason score of PC (p<0.05). MNA, MNP, MDx and MNFe may also have important prognostic implications in canine prostatic cancer since negatively correlated with the survival time. Biopsy specimens contained nuclei that were smaller and more irregular in comparison to those in prostatectomy and necropsy specimens and therefore factors associated with tissue sampling and processing may influence the overall morphometric evaluation. The results indicate that nuclear morphometric analysis in combination with Gleason score can help in canine prostate cancer grading, thus contributing to the establishment of a more precise prognosis and patient's management. Copyright © 2017 Elsevier Ltd. All rights reserved.

Understanding the mechanical coupling between magma emplacement and the resulting deformation: the example of saucer-shaped sills

NASA Astrophysics Data System (ADS)

Galland, O.; Neumann, E. R.; Planke, S.

2009-12-01

The mechanical coupling between magma intrusions and the surrounding rocks plays a major role in the emplacement of volcanic plumbing systems. The deformation associated with magma emplacement has been widely studied, such as caldera inflation/deflation, volcano deformation during dike intrusion, and doming above laccoliths. However, the feedback processes, i.e. the effect of deformation resulting from intruding magma on the propagation of the intrusion itself, have rarely been studied. Saucer-shaped sills are adequate geological objects to understand such processes. Indeed, observation show that saucer-shaped sills are often associated with dome-like structures affecting the overlying sediments. In addition, there is a clear geometrical relation between the sills and the domes: the dome diameters are almost identical to those of saucers, and the tips of the inclined sheets of saucers are superimposed on the edges of the domes. In this presentation, we report on experimental investigations of the emplacement mechanisms of saucer-shaped sills and associated deformation. The model materials were (1) cohesive fine-grained silica flour, representing brittle crust, and (2) molten low-viscosity oil, representing magma. A weak layer located at the top of the injection inlet simulates strata. The main variable parameter is injection depth. During experiments, the surface of the model is digitalized through a structured light technique based on the moiré projection principle. Such a tool provides topographic maps of the surface of the model and allows a periodic (every 1.5 s) monitoring of the model topography. When the model magma starts intruding, a symmetrical dome rises above the inlet. Subsequently, the dome inflates and widens, and then evolves to a plateau-like feature, with nearly flat upper surface and steep sides. At the end of the experiments, the intruding liquid erupts at the edge of the plateau. The intrusions formed in the experiments are saucer-shaped sills, with flat inner sills, steep inclined sheets and flatter outer sills. Like in nature, there are clear relations between the intrusions geometries and the domes: (1) the inclined sheet formed underneath the edge of the plateau, and the oil erupts at its outermost edge; (2) the diameter of the sill is similar to that of the dome. In addition, the diameter of the sills and the domes increased with increasing injection depth. Our results suggest that the evolution of the deforming surface reflects the evolution of the intrusion, i.e. the first doming phase corresponds to the emplacement of a horizontal basal sill, and the dome-to-plateau transition corresponds to the transition from a basal sill to an inclined sheet. Conversely, the correlation between the dome and intrusion width and emplacement depth suggests that the development of the doming exerts a feedback on the sill propagation and controls the formation of the inclined sheets. Thus, our study shows that a good understanding of the coupling between magma emplacement and the associated deformation has major implications for the understanding of magma transport in volcanic systems.

Prognostic significance of morphometric parameters of nucleoli and nuclei of invasive ductal breast carcinomas.

PubMed

Karpińska-Kaczmarczyk, Katarzyna; Kram, Andrzej; Kaczmarczyk, Mariusz; Domagała, Wenancjusz

2009-01-01

The aim of this study was to evaluate associations between seven morphometric parameters of the nucleoli and nuclei of methyl green and pyronin Y (MG-PY) stained tumour cells of invasive ductal breast carcinoma with relapse-free survival (RFS) and overall survival (OS) time. Histological sections from 150 invasive ductal breast cancers were stained with MG-PY and the following parameters were evaluated by computer image analysis: the nucleolar area, long to short nucleolar axis ratio, nucleolar shape parameter assessing the degree of nucleolar roundness, long to short nuclear axis ratio, number of nucleoli in the nucleus and the percentage of the nuclear cross-section surface area occupied by the nucleoli. A statistically significant association between a nucleolar shape polymorphism and the number of nucleoli in the nuclei of tumour cells and the RFS but not OS was found in the entire group of patients as well as patients with axillary lymph node metastases. A higher polymorphism of nucleolar shape and a higher number of nucleoli in the nuclei of breast cancer cells were associated with decreased relapse-free survival (p < 0.05). The remaining morphometric parameters showed no statistically significant association with RFS or OS. The results indicate that morphometry of nucleoli in MG-PY stained histological sections can be useful in the analysis of associations between nucleolar parameters and prognosis of patients with invasive breast cancer.

Two Algorithms for High-throughput and Multi-parametric Quantification of Drosophila Neuromuscular Junction Morphology.

PubMed

Castells-Nobau, Anna; Nijhof, Bonnie; Eidhof, Ilse; Wolf, Louis; Scheffer-de Gooyert, Jolanda M; Monedero, Ignacio; Torroja, Laura; van der Laak, Jeroen A W M; Schenck, Annette

2017-05-03

Synaptic morphology is tightly related to synaptic efficacy, and in many cases morphological synapse defects ultimately lead to synaptic malfunction. The Drosophila larval neuromuscular junction (NMJ), a well-established model for glutamatergic synapses, has been extensively studied for decades. Identification of mutations causing NMJ morphological defects revealed a repertoire of genes that regulate synapse development and function. Many of these were identified in large-scale studies that focused on qualitative approaches to detect morphological abnormalities of the Drosophila NMJ. A drawback of qualitative analyses is that many subtle players contributing to NMJ morphology likely remain unnoticed. Whereas quantitative analyses are required to detect the subtler morphological differences, such analyses are not yet commonly performed because they are laborious. This protocol describes in detail two image analysis algorithms "Drosophila NMJ Morphometrics" and "Drosophila NMJ Bouton Morphometrics", available as Fiji-compatible macros, for quantitative, accurate and objective morphometric analysis of the Drosophila NMJ. This methodology is developed to analyze NMJ terminals immunolabeled with the commonly used markers Dlg-1 and Brp. Additionally, its wider application to other markers such as Hrp, Csp and Syt is presented in this protocol. The macros are able to assess nine morphological NMJ features: NMJ area, NMJ perimeter, number of boutons, NMJ length, NMJ longest branch length, number of islands, number of branches, number of branching points and number of active zones in the NMJ terminal.

Morphometrical differences between resectable and non-resectable pancreatic cancer: a fractal analysis.

PubMed

Vasilescu, Catalin; Giza, Dana Elena; Petrisor, Petre; Dobrescu, Radu; Popescu, Irinel; Herlea, Vlad

2012-01-01

Pancreatic cancer is a highly aggressive cancer with a rising incidence and poor prognosis despite active surgical treatment. Candidates for surgical resection should be carefully selected. In order to avoid unnecessary laparotomy it is useful to identify reliable factors that may predict resectability. Nuclear morphometry and fractal dimension of pancreatic nuclear features could provide important preoperative information in assessing pancreas resectability. Sixty-one patients diagnosed with pancreatic cancer were enrolled in this retrospective study between 2003 and 2005. Patients were divided into two groups: one resectable cancer group and one with non-resectable pancreatic cancer. Morphometric parameters measured were: nuclear area, length of minor axis and length of major axis. Nuclear shape and chromatin distribution of the pancreatic tumor cells were both estimated using fractal dimension. Morphometric measurements have shown significant differences between the nuclear area of the resectable group and the non-resectable group (61.9 ± 19.8µm vs. 42.2 ± 15.6µm). Fractal dimension of the nuclear outlines and chromatin distribution was found to have a higher value in the non-resectable group (p<0.05). Objective measurements should be performed to improve risk assessment and therapeutic decisions in pancreatic cancer. Nuclear morphometry of the pancreatic nuclear features can provide important pre-operative information in resectability assessment. The fractal dimension of the nuclear shape and chromatin distribution may be considered a new promising adjunctive tool for conventional pathological analysis.

Geology of the Ugashik-Mount Peulik Volcanic Center, Alaska

USGS Publications Warehouse

Miller, Thomas P.

2004-01-01

The Ugashik-Mount Peulik volcanic center, 550 km southwest of Anchorage on the Alaska Peninsula, consists of the late Quaternary 5-km-wide Ugashik caldera and the stratovolcano Mount Peulik built on the north flank of Ugashik. The center has been the site of explosive volcanism including a caldera-forming eruption and post-caldera dome-destructive activity. Mount Peulik has been formed entirely in Holocene time and erupted in 1814 and 1845. A large lava dome occupies the summit crater, which is breached to the west. A smaller dome is perched high on the southeast flank of the cone. Pyroclastic-flow deposits form aprons below both domes. One or more sector-collapse events occurred early in the formation of Mount Peulik volcano resulting in a large area of debris-avalanche deposits on the volcano's northwest flank. The Ugashik-Mount Peulik center is a calcalkaline suite of basalt, andesite, dacite, and rhyolite, ranging in SiO2 content from 51 to 72 percent. The Ugashik-Mount Peulik magmas appear to be co-genetic in a broad sense and their compositional variation has probably resulted from a combination of fractional crystallization and magma-mixing. The most likely scenario for a future eruption is that one or more of the summit domes on Mount Peulik are destroyed as new magma rises to the surface. Debris avalanches and pyroclastic flows may then move down the west and, less likely, east flanks of the volcano for distances of 10 km or more. A new lava dome or series of domes would be expected to form either during or within some few years after the explosive disruption of the previous dome. This cycle of dome disruption, pyroclastic flow generation, and new dome formation could be repeated several times in a single eruption. The volcano poses little direct threat to human population as the area is sparsely populated. The most serious hazard is the effect of airborne volcanic ash on aircraft since Mount Peulik sits astride heavily traveled air routes connecting the U.S. and Europe to Asia. Activity of the type described could produce eruption columns to heights of 15 km and result in significant amounts of ash 250-300 km downwind.

Influence of conduit flow mechanics on magma rheology and the growth style of lava domes

NASA Astrophysics Data System (ADS)

Husain, Taha; Elsworth, Derek; Voight, Barry; Mattioli, Glen; Jansma, Pamela

2018-06-01

We develop a 2-D particle-mechanics model to explore different lava-dome growth styles. These range from endogenous lava dome growth comprising expansion of a ductile dome core to the exogenous extrusion of a degassed lava plug resulting in generation of a lava spine. We couple conduit flow dynamics with surface growth of the evolving lava dome, fuelled by an open-system magma chamber undergoing continuous replenishment. The conduit flow model accounts for the variation in rheology of ascending magma that results from degassing-induced crystallization. A period of reduced effusive flow rates promote enhanced degassing-induced crystallization. A degassed lava plug extrudes exogenously for magmas with crystal contents (ϕ) of 78 per cent, yield strength >1.62 MPa, and at flow rates of <0.5 m3 s-1, while endogenous dome growth is predicted at higher flow rates (Qout > 3 m3 s-1) for magma with lower relative yield strengths (<1 MPa). At moderately high flow rates (Qout = 4 m3 s-1), the extrusion of magma with lower crystal content (62 per cent) and low interparticulate yield strength (0.6 MPa) results in the development of endogenous shear lobes. Our simulations model the periodic extrusion history at Mount St. Helens (1980-1983). Endogenous growth initiates in the simulated lava dome with the extrusion of low yield strength magma (ϕ = 0.63 and τp = 0.76 MPa) after the crystallized viscous plug (ϕ = 0.87 and τp = 3 MPa) at the conduit exit is forced out by the high discharge rate pulse (2 < Qout < 12 m3 s-1). The size of the endogenous viscous plug and the occurrence of exogenous growth depend on magma yield strength and the magma chamber volume, which control the periodicity of the effusion. Our simulations generate dome morphologies similar to those observed at Mount St Helens, and demonstrate the degree to which domes can sag and spread during and following extrusion pulses. This process, which has been observed at Mount St. Helens and other locations, largely reflects gravitational loading of dome with a viscous core, with retardation by yield strength and talus friction.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Cooper, W. James; Albertson, R Craig; Jacob, Rick E.

Here we present a re-description of Abudefduf luridus and reassign it to the genus Similiparma. We supplement traditional diagnoses and descriptions of this species with quantitative anatomical data collected from a family-wide geometric morphometric analysis of head morphology (44 species representing all 30 damselfish genera) and data from cranial micro-CT scans of fishes in the genus Similiparma. The use of geometric morphometric analyses (and other methods of shape analysis) permits detailed comparisons between the morphology of specific taxa and the anatomical diversity that has arisen in an entire lineage. This provides a particularly useful supplement to traditional description methods andmore » we recommend the use of such techniques by systematists. Similiparma and its close relatives constitute a branch of the damselfish phylogenetic tree that predominantly inhabits rocky reefs in the Atlantic and Eastern Pacific, as opposed to the more commonly studied damselfishes that constitute a large portion of the ichthyofauna on all coral-reef communities.« less

Blood platelets: computerized morphometry applied on optical images

NASA Astrophysics Data System (ADS)

Korobova, Farida V.; Ivanova, Tatyana V.; Gusev, Alexander A.; Shmarov, Dmitry A.; Kozinets, Gennady I.

2000-11-01

The new technology of computerized morphometric image analysis of platelets on blood smears was developed. In a basis of the device is included analysis of cytophotometric and morphometric parameters of platelets. Geometrical and optical parameters of platelets on 35 donors, platelet concentrates and 15 patients with haemorrhagic thrombocythaemia were investigated, average meanings for the area, diameter, its logarithms and optical density of platelets in norm were received. Distribution of the areas, diameters and optical densities of platelets of patients with haemorrhagic thrombocythaemia differed from those at the healthy people. After a course of treatment these meanings came nearer to normal. The important characteristics of platelets in platelet concentrates after three days of storage were in limits of normal meanings, but differed from those in whole blood platelets. Obtained data allow to enter the quantitative standards into investigation of platelets of the healthy people and at various alteration of thrombocytopoieses.

Left Atrial trajectory impairment in Hypertrophic Cardiomyopathy disclosed by Geometric Morphometrics and Parallel Transport

NASA Astrophysics Data System (ADS)

Piras, Paolo; Torromeo, Concetta; Re, Federica; Evangelista, Antonietta; Gabriele, Stefano; Esposito, Giuseppe; Nardinocchi, Paola; Teresi, Luciano; Madeo, Andrea; Chialastri, Claudia; Schiariti, Michele; Varano, Valerio; Uguccioni, Massimo; Puddu, Paolo E.

2016-10-01

The analysis of full Left Atrium (LA) deformation and whole LA deformational trajectory in time has been poorly investigated and, to the best of our knowledge, seldom discussed in patients with Hypertrophic Cardiomyopathy. Therefore, we considered 22 patients with Hypertrophic Cardiomyopathy (HCM) and 46 healthy subjects, investigated them by three-dimensional Speckle Tracking Echocardiography, and studied the derived landmark clouds via Geometric Morphometrics with Parallel Transport. Trajectory shape and trajectory size were different in Controls versus HCM and their classification powers had high AUC (Area Under the Receiving Operator Characteristic Curve) and accuracy. The two trajectories were much different at the transition between LA conduit and booster pump functions. Full shape and deformation analyses with trajectory analysis enabled a straightforward perception of pathophysiological consequences of HCM condition on LA functioning. It might be worthwhile to apply these techniques to look for novel pathophysiological approaches that may better define atrio-ventricular interaction.

Predictive variables for the biological behaviour of basal cell carcinoma of the face: relevance of morphometry of the nuclei.

PubMed

Appel, T; Bierhoff, E; Appel, K; von Lindern, J-J; Bergé, S; Niederhagen, B

2003-06-01

We did a morphometric analysis of 130 histological sections of basal cell carcinoma (BCC) of the face to find out whether morphometric variables in the structure of the nuclei of BCC cells could serve as predictors of the biological behaviour. We considered the following variables: maximum and minimum diameters, perimeter, nuclear area and five form factors that characterise and quantify the shape of a structure (axis ratio, shape factor, nuclear contour index, nuclear roundness and circumference ratio). We did a statistical analysis of primary and recurring tumours and four histology-based groups (multifocal superficial BCCs, nodular BCCs, sclerosing BCCs and miscellaneous forms) using a two-sided t test for independent samples. Multifocal superficial BCCs showed significantly smaller values for the directly measured variables (maximum and minimum diameters, perimeter and nuclear area). Morphometry could not distinguish between primary and recurring tumours.

Hot vacuum creep forming of scale shuttle external tank dome caps

NASA Technical Reports Server (NTRS)

Thomas, A. O.

1974-01-01

The feasibility of forming shuttle external tank dome caps by hot vacuum creep was investigated for a sub-scale configuration. Aluminum 2219-T37 at an elevated temperature equivalent to the artificial aging time and temperature was used to produce the T87 condition while achieving MIL-HBK -5 properties of 2219-T87 aluminum alloy material. A feasibility analysis was conducted in two phases: the design and build of a sub-scale hot vacuum creep forming (HVCF) die and the forming evaluation of various cap configurations. The contour was constant in all evaluations. This configuration was found to be too severe for the limited forming force available by HVCF.

Using satellite imagery to identify and analyze tumuli on Earth and Mars

NASA Astrophysics Data System (ADS)

Diniega, Serina; Sangha, Simran; Browne, Brandon

2018-01-01

Tumuli are small, dome-like features that form when magmatic pressures build within a subsurface lava pathway, causing the overlying crust to bulge upwards. As the appearance of these features has been linked to lava flow structure (e.g., underlying lava flow tubes) and conditions, there is interest in identifying such features in satellite images so they can be used to expand our understanding of lava flows within regions difficult to access (such as on other planets). Here, we define a methodology for identifying (and measuring) tumuli within satellite imagery, and validate it by comparing our results with fieldwork results of terrestrial tumuli reported in the literature and with independent measurements we made within Amboy Field, CA. In addition, we present aggregated results from the application of our methodology to satellite images of six terrestrial fields and seven martian fields (with >2100 tumuli identified, per planet). Comparisons of tumuli morphometrics on Earth and Mars yield similarities in size and overall shape, which were surprising given the many differences in the environmental and planetary conditions within which these features have formed. Given our measurements, we identify constraints for tumulus formation models and drivers that would yield similar shapes and sizes on two different planets. Furthermore, we test a published hypothesis regarding the number of tumuli that form per a square kilometer, and find it unlikely that a diagnostic "tumuli density" value exists.

Cybersickness Following Repeated Exposure to DOME and HMD Virtual Environments

NASA Technical Reports Server (NTRS)

Taylor, Laura C.; Harm, Deborah L.; Kennedy, Robert S.; Reschke, Millard F.; Loftin, R. Bowen

2011-01-01

Virtual environments (VE) offer unique training opportunities, including training astronauts to preadapt them to the novel sensory conditions of microgravity. However, one unresolved issue with VE use is the occurrence of cybersickness during and following exposure to VE systems. Most individuals adapt and become less ill with repeated interaction with VEs. The goal of this investigation was to compare motion sickness symptoms (MSS) produced by dome and head-mounted (HMD) displays and to examine the effects of repeated exposures on MSS. Sixty-one subjects participated in the study. Three experimental sessions were performed each separated by one day. The subjects performed a navigation and pick and place task in either a dome or HMD VE. MSS were measured using a Simulator Sickness Questionnaire before, immediately after, and at 1, 2, 4 and 6 hours following exposure to the VEs. MSS data were normalized by calculating the natural log of each score and an analysis of variance was performed. We observed significant main effects for day and time and a significant day by time interaction for total sickness and for each of the subscales, nausea, oculomotor and disorientation. However, there was no significant main effect for device. In conclusion, subjects reported a large increase in MSS immediately following exposure to both the HMD and dome, followed by a rapid recovery across time. Sickness severity also decreased over days, which suggests that subjects become dual-adapted over time making VE training a viable pre-flight countermeasure for space motion sickness.

76 FR 66618 - Airworthiness Directives; Eurocopter France (Eurocopter) Model EC225LP Helicopters

Federal Register 2010, 2011, 2012, 2013, 2014

2011-10-27

... tightening torque of the screws which secure the assembly. Since then, Eurocopter has developed a.... EASB 05A005 specifies checking the dome fairing support for a crack and readjusting the tightening torque of the dome fairing-to-dome fairing support attachment screws. If a crack is found, the EASB...

A new look at the Lake Superior biomass size spectrum

USGS Publications Warehouse

Yurista, Peder M.; Yule, Daniel L.; Balge, Matt; VanAlstine, Jon D.; Thompson, Jo A.; Gamble, Allison E.; Hrabik, Thomas R.; Kelly, John R.; Stockwell, Jason D.; Vinson, Mark

2014-01-01

We synthesized data from multiple sampling programs and years to describe the Lake Superior pelagic biomass size structure. Data consisted of Coulter counts for phytoplankton, optical plankton counts for zooplankton, and acoustic surveys for pelagic prey fish. The size spectrum was stable across two time periods separated by 5 years. The primary scaling or overall slope of the normalized biomass size spectra for the combined years was −1.113, consistent with a previous estimate for Lake Superior (−1.10). Periodic dome structures within the overall biomass size structure were fit to polynomial regressions based on the observed sub-domes within the classical taxonomic positions (algae, zooplankton, and fish). This interpretation of periodic dome delineation was aligned more closely with predator–prey size relationships that exist within the zooplankton (herbivorous, predacious) and fish (planktivorous, piscivorous) taxonomic positions. Domes were spaced approximately every 3.78 log10 units along the axis and with a decreasing peak magnitude of −4.1 log10 units. The relative position of the algal and herbivorous zooplankton domes predicted well the subsequent biomass domes for larger predatory zooplankton and planktivorous prey fish.

Explosive activity associated with the growth of volcanic domes

USGS Publications Warehouse

Newhall, C.G.; Melson, W.G.

1983-01-01

Domes offer unique opportunities to measure or infer the characteristics of magmas that, at domes and elsewhere, control explosive activity. A review of explosive activity associated with historical dome growth shows that: 1. (1) explosive activity has occurred in close association with nearly all historical dome growth; 2. (2) whole-rock SiO2 content, a crude but widely reported indicator of magma viscosity, shows no systematic relationship to the timing and character of explosions; 3. (3) the average rate of dome growth, a crude indicator of the rate of supply of magma and volatiles to the near-surface enviornment, shows no systematic relationship to the timing or character of explosions; and 4. (4) new studies at Arenal and Mount St. Helens suggest that water content is the dominant control on explosions from water-rich magmas, whereas the crystal content and composition of the interstitial melt (and hence magma viscosity) are equally or more important controls on explosions from water-poor magmas. New efforts should be made to improve current, rather limited techniques for monitoring pre-eruption volatile content and magma viscosity, and thus the explosive potential of magmas. ?? 1983.

Pre-HEAT: submillimeter site testing and astronomical spectra from Dome A, Antarctica

NASA Astrophysics Data System (ADS)

Kulesa, C. A.; Walker, C. K.; Schein, M.; Golish, D.; Tothill, N.; Siegel, P.; Weinreb, S.; Jones, G.; Bardin, J.; Jacobs, K.; Martin, C. L.; Storey, J.; Ashley, M.; Lawrence, J.; Luong-Van, D.; Everett, J.; Wang, L.; Feng, L.; Zhu, Z.; Yan, J.; Yang, J.; Zhang, X.-G.; Cui, X.; Yuan, X.; Hu, J.; Xu, Z.; Jiang, Z.; Yang, H.; Li, Y.; Sun, B.; Qin, W.; Shang, Z.

2008-07-01

Pre-HEAT is a 20 cm aperture submillimeter-wave telescope with a 660 GHz (450 micron) Schottky diode heterodyne receiver and digital FFT spectrometer for the Plateau Observatory (PLATO) developed by the University of New South Wales. In January 2008 it was deployed to Dome A, the summit of the Antarctic plateau, as part of a scientific traverse led by the Polar Research Institute of China and the Chinese Academy of Sciences. Dome A may be one of the best sites in the world for ground based Terahertz astronomy, based on the exceptionally cold, dry and stable conditions which prevail there. Pre-HEAT is measuring the 450 micron sky opacity at Dome A and mapping the Galactic Plane in the 13CO J=6-5 line, constituting the first submillimeter measurements from Dome A. It is field-testing many of the key technologies for its namesake -- a successor mission called HEAT: the High Elevation Antarctic Terahertz telescope. Exciting prospects for submillimeter astronomy from Dome A and the status of Pre-HEAT will be presented.

The thermal environment of the fiber glass dome for the new solar telescope at Big Bear Solar Observatory

NASA Astrophysics Data System (ADS)

Verdoni, A. P.; Denker, C.; Varsik, J. R.; Shumko, S.; Nenow, J.; Coulter, R.

2007-09-01

The New Solar Telescope (NST) is a 1.6-meter off-axis Gregory-type telescope with an equatorial mount and an open optical support structure. To mitigate the temperature fluctuations along the exposed optical path, the effects of local/dome-related seeing have to be minimized. To accomplish this, NST will be housed in a 5/8-sphere fiberglass dome that is outfitted with 14 active vents evenly spaced around its perimeter. The 14 vents house louvers that open and close independently of one another to regulate and direct the passage of air through the dome. In January 2006, 16 thermal probes were installed throughout the dome and the temperature distribution was measured. The measurements confirmed the existence of a strong thermal gradient on the order of 5° Celsius inside the dome. In December 2006, a second set of temperature measurements were made using different louver configurations. In this study, we present the results of these measurements along with their integration into the thermal control system (ThCS) and the overall telescope control system (TCS).

Forces and dynamics in epithelial domes of controlled size and shape

NASA Astrophysics Data System (ADS)

Latorre-Ibars, Ernest; Casares, Laura; Gomez-Gonzalez, Manuel; Uroz, Marina; Arroyo, Marino; Trepat, Xavier

Mechanobiology of epithelia plays a central role in morphogenesis, wound healing, and tumor progression. Its current understanding relies on mechanical measurements on flat epithelial layers. However, most epithelia in vivo exhibit a curved 3D shape enclosing a pressurized lumen. Using soft micropatterned substrates we produce massive parallel arrays of epithelial domes with controlled size and basal shape. We measure epithelial traction, tension, and luminal pressure in epithelial domes. The local stress tensor on the freestanding epithelial membrane is then mapped by combining measured luminal pressure and local curvature. We show that tension and cell shape are highly anisotropic and vary along the meridional position of the domes. Finally, we establish constitutive relations between shape, tension, and pressure during perturbations of the contractile machinery, osmotic shocks, and spontaneous fluctuations of dome volume. Our findings contradict a description of the epithelium as a fluid capillary surface. Cells in the dome are unable to relax into a uniform and isotropic tensional state through sub- and supra-cellular rearrangements. Mapping epithelial shape, tension, and pressure will enable quantitative studies of mechanobiology in 3D epithelia of controlled size and shape.

[A study on the mechanical behaviors of abutment teeth with various coping designs under overdenture].

PubMed

Vang, M S; Cho, J H

1990-04-01

An overdenture is a complete denture supported by both soft tissue and a few remaining natural teeth. The purpose of this study was to analyze the stress distribution of the teeth and supporting structures when various type of coping under overdenture was applied. The analysis was conducted by using the finite element method and changing the condition such as the direction of the load, the shape of coping on the abutment: The model included overdenture copings, abutment tooth and supporting structures. The results of analysis were as follows: 1. The short dome coping showed well distribution of stress. 2. The dome shaped design produced higher stress distribution than square and inclined plane design. 3. As the height of copings on the abutment was increased, the displacements increased. 4. The magnitude and direction of the abutment displacements were influenced by the direction of load application.

Hyperthyroidism with dome-and-dart T wave: A case report: A care-compliant article.

PubMed

Lai, Ping; Yuan, Jing-Ling; Xue, Jin-Hua; Qiu, Yue-Qun

2017-02-01

Dome-and-dart T waves (or bifid T waves) are a rare phenomenon in the surface electrocardiogram. These wave forms are mainly observed in patients with congenital heart disease such as atrial septal defect and ventricular septal defect. And hyperthyroidism who presented with an electrocardiogram that had dome-and-dart T waves in a precordial lead is never been reported. The patient presented with continuous tachycardia, palpitations, chest tightness, and headache for 4 days, and aggravated for 1 day. Hyperthyroidism. Methimazole. All symptoms were alleviated. Dome-and-dart or bifid T waves have been reported in the conventional 12-lead electrocardiograms in some patients with congenital heart disease. The case illustrated here, to the best of our knowledge, dome-and-dart or bifid T waves may associate with hyperthyroidism patients.

Hyperthyroidism with dome-and-dart T wave: A case report

PubMed Central

Lai, Ping; Yuan, Jing-ling; Xue, Jin-hua; Qiu, Yue-qun

2017-01-01

Abstract Rationale: Dome-and-dart T waves (or bifid T waves) are a rare phenomenon in the surface electrocardiogram. These wave forms are mainly observed in patients with congenital heart disease such as atrial septal defect and ventricular septal defect. And hyperthyroidism who presented with an electrocardiogram that had dome-and-dart T waves in a precordial lead is never been reported. Patient concerns: The patient presented with continuous tachycardia, palpitations, chest tightness, and headache for 4 days, and aggravated for 1 day. Diagnoses: Hyperthyroidism. Interventions: Methimazole. Outcomes: All symptoms were alleviated. Lessons: Dome-and-dart or bifid T waves have been reported in the conventional 12-lead electrocardiograms in some patients with congenital heart disease. The case illustrated here, to the best of our knowledge, dome-and-dart or bifid T waves may associate with hyperthyroidism patients. PMID:28178156

Water-quality data for aquifers, streams, and lakes in the vicinity of Keechi, Mount Sylvan, Oakwood, and Palestine salt domes, northeast Texas salt-dome basin

DOE Office of Scientific and Technical Information (OSTI.GOV)

Carr, J.E.; Halasz, S.J.; Liscum, F.

1980-11-01

This report contains water-quality data for aquifers, streams, and lakes in the vicinity of Keechi, Mount Sylvan, Oakwood, and Palestine Salt Domes in the northeast Texas salt-dome basin. Water-quality data were compiled for aquifers in the Wilcox Group, the Carrizo Sand, and the Queen City Sand. The data include analyses for dissolved solids, pH, temperature, hardness, calcium, magnesium, sodium, bicarbonate, chloride, and sulfate. Water-quality and streamflow data were obtained from 63 surface-water sites in the vicinity of the domes. These data include water discharge, specific conductance, pH, water temperature, and dissolved oxygen. Samples were collected at selected sites for analysismore » of principal and selected minor dissolved constituents.« less

On the Theory of Accumulation of Hydrocarbons in a Dome Used to Eliminate a Technogenic Spill at the Bottom of the Ocean

NASA Astrophysics Data System (ADS)

Gimaltdinov, I. K.; Kil'dibaeva, S. R.

2018-01-01

Consideration is given to the operation of a dome separator installed at the bottom of the World Ocean and intended to eliminate the effects of technogenic spill of hydrocarbons. It is assumed that oil and gas (methane) escape from the damaged well on the ocean floor. Under the conditions of stable existence of a hydrate, a hydration sheath is formed on the surface of methane bubbles. To collect the entering hydrocarbons, a dome from a soft polyurethane shell is installed above the spill site, inside which the hydrocarbons are accumulated. In the regime of steady-state operation of the dome, provision is made for pumping out of hydrocarbons for transportation and further utilization. In the work, temperature fields of the hydrocarbon layers accumulated in the dome are investigated.

Large Spun Formed Friction-Stir Welded Tank Domes for Liquid Propellant Tanks Made from AA2195: A Technology Demonstration for the Next Generation of Heavy Lift Launchers

NASA Technical Reports Server (NTRS)

Stachulla, M.; Pernpeinter, R.; Brewster J.; Curreri, P.; Hoffman, E.

2010-01-01

Improving structural efficiency while reducing manufacturing costs are key objectives when making future heavy-lift launchers more performing and cost efficient. The main enabling technologies are the application of advanced high performance materials as well as cost effective manufacture processes. This paper presents the status and main results of a joint industrial research & development effort to demonstrate TRL 6 of a novel manufacturing process for large liquid propellant tanks for launcher applications. Using high strength aluminium-lithium alloy combined with the spin forming manufacturing technique, this development aims at thinner wall thickness and weight savings up to 25% as well as a significant reduction in manufacturing effort. In this program, the concave spin forming process is used to manufacture tank domes from a single flat plate. Applied to aluminium alloy, this process allows reaching the highest possible material strength status T8, eliminating numerous welding steps which are typically necessary to assemble tank domes from 3D-curved panels. To minimize raw material costs for large diameter tank domes for launchers, the dome blank has been composed from standard plates welded together prior to spin forming by friction stir welding. After welding, the dome blank is contoured in order to meet the required wall thickness distribution. For achieving a material state of T8, also in the welding seams, the applied spin forming process allows the required cold stretching of the 3D-curved dome, with a subsequent ageing in a furnace. This combined manufacturing process has been demonstrated up to TRL 6 for tank domes with a 5.4 m diameter. In this paper, the manufacturing process as well as test results are presented. Plans are shown how this process could be applied to future heavy-lift launch vehicles developments, also for larger dome diameters.

DOMe: A deduplication optimization method for the NewSQL database backups

PubMed Central

Wang, Longxiang; Zhu, Zhengdong; Zhang, Xingjun; Wang, Yinfeng

2017-01-01

Reducing duplicated data of database backups is an important application scenario for data deduplication technology. NewSQL is an emerging database system and is now being used more and more widely. NewSQL systems need to improve data reliability by periodically backing up in-memory data, resulting in a lot of duplicated data. The traditional deduplication method is not optimized for the NewSQL server system and cannot take full advantage of hardware resources to optimize deduplication performance. A recent research pointed out that the future NewSQL server will have thousands of CPU cores, large DRAM and huge NVRAM. Therefore, how to utilize these hardware resources to optimize the performance of data deduplication is an important issue. To solve this problem, we propose a deduplication optimization method (DOMe) for NewSQL system backup. To take advantage of the large number of CPU cores in the NewSQL server to optimize deduplication performance, DOMe parallelizes the deduplication method based on the fork-join framework. The fingerprint index, which is the key data structure in the deduplication process, is implemented as pure in-memory hash table, which makes full use of the large DRAM in NewSQL system, eliminating the performance bottleneck problem of fingerprint index existing in traditional deduplication method. The H-store is used as a typical NewSQL database system to implement DOMe method. DOMe is experimentally analyzed by two representative backup data. The experimental results show that: 1) DOMe can reduce the duplicated NewSQL backup data. 2) DOMe significantly improves deduplication performance by parallelizing CDC algorithms. In the case of the theoretical speedup ratio of the server is 20.8, the speedup ratio of DOMe can achieve up to 18; 3) DOMe improved the deduplication throughput by 1.5 times through the pure in-memory index optimization method. PMID:29049307

Seasonal trophic structure of the Scotia Sea pelagic ecosystem considered through biomass spectra and stable isotope analysis

NASA Astrophysics Data System (ADS)

Tarling, G. A.; Stowasser, G.; Ward, P.; Poulton, A. J.; Zhou, M.; Venables, H. J.; McGill, R. A. R.; Murphy, E. J.

2012-01-01

The biomass size structure of pelagic communities provides a system level perspective that can be instructive when considering trophic interactions. Such perspectives can become even more powerful when combined with taxonomic information and stable isotope analysis. Here we apply these approaches to the pelagic community of the Scotia Sea (Southern Ocean) and consider the structure and development of trophic interactions over different years and seasons. Samples were collected from three open-ocean cruises during the austral spring 2006, summer 2008 and autumn 2009. Three main sampling techniques were employed: sampling bottles for microplankton (0-50 m), vertically hauled fine meshed nets for mesozooplankton (0-400 m) and coarse-meshed trawls for macrozooplankton and nekton (0-1000 m). All samples were identified to the lowest practicable taxonomic level and their abundance, individual body weight and biomass (in terms of carbon) estimated. Slopes of normalised biomass spectrum versus size showed a significant but not substantial difference between cruises and were between -1.09 and -1.06. These slopes were shallower than expected for a community at equilibrium and indicated that there was an accumulation of biomass in the larger size classes (10 1-10 5 mg C ind -1). A secondary structure of biomass domes was also apparent, with the domes being 2.5-3 log 10 intervals apart in spring and summer and 2 log 10 intervals apart in autumn. The recruitment of copepod-consuming macrozooplankton, Euphausia triacantha and Themisto gaudichaudii into an additional biomass dome was responsible for the decrease in the inter-dome interval in autumn. Predator to prey mass ratios estimated from stable isotope analysis reached a minimum in autumn while the estimated trophic level of myctophid fish was highest in that season. This reflected greater amounts of internal recycling and increased numbers of trophic levels in autumn compared to earlier times of the year. The accumulation of biomass in larger size classes throughout the year in the Scotia Sea may reflect the prevalence of species that store energy and have multiyear life-cycles.

Geomorphometric variability of "monogenetic" volcanic cones: Evidence from Mauna Kea, Lanzarote and experimental cones

NASA Astrophysics Data System (ADS)

Kervyn, M.; Ernst, G. G. J.; Carracedo, J.-C.; Jacobs, P.

2012-01-01

Volcanic cones are the most common volcanic constructs on Earth. Their shape can be quantified using two morphometric ratios: the crater/cone base ratio (W cr/W co) and the cone height/width ratio (H co/W co). The average values for these ratios obtained over entire cone fields have been explained by the repose angle of loose granular material (i.e. scoria) controlling cone slopes. The observed variability in these ratios between individual cones has been attributed to the effect of erosional processes or contrasting eruptive conditions on cone morphometry. Using a GIS-based approach, high spatial resolution Digital Elevation Models and airphotos, two new geomorphometry datasets for cone fields at Mauna Kea (Hawaii, USA) and Lanzarote (Canary Islands, Spain) are extracted and analyzed here. The key observation in these datasets is the great variability in morphometric ratios, even for simple-shape and well-preserved cones. Simple analog experiments are presented to analyze factors influencing the morphometric ratios. The formation of a crater is simulated within an analog cone (i.e. a sand pile) by opening a drainage conduit at the cone base. Results from experiments show that variability in the morphometric ratios can be attributed to variations in the width, height and horizontal offset of the drainage point relative to the cone symmetry axis, to the dip of the underlying slope or to the influence of a small proportion of fine cohesive material. GIS analysis and analog experiments, together with specific examples of cones documented in the field, suggest that the morphometric ratios for well-preserved volcanic cones are controlled by a combination of 1) the intrinsic cone material properties, 2) time-dependent eruption conditions, 3) the local setting, and 4) the method used to estimate the cone height. Implications for interpreting cone morphometry solely as either an age or as an eruption condition indicator are highlighted.

Pixel-Level Deep Segmentation: Artificial Intelligence Quantifies Muscle on Computed Tomography for Body Morphometric Analysis.

PubMed

Lee, Hyunkwang; Troschel, Fabian M; Tajmir, Shahein; Fuchs, Georg; Mario, Julia; Fintelmann, Florian J; Do, Synho

2017-08-01

Pretreatment risk stratification is key for personalized medicine. While many physicians rely on an "eyeball test" to assess whether patients will tolerate major surgery or chemotherapy, "eyeballing" is inherently subjective and difficult to quantify. The concept of morphometric age derived from cross-sectional imaging has been found to correlate well with outcomes such as length of stay, morbidity, and mortality. However, the determination of the morphometric age is time intensive and requires highly trained experts. In this study, we propose a fully automated deep learning system for the segmentation of skeletal muscle cross-sectional area (CSA) on an axial computed tomography image taken at the third lumbar vertebra. We utilized a fully automated deep segmentation model derived from an extended implementation of a fully convolutional network with weight initialization of an ImageNet pre-trained model, followed by post processing to eliminate intramuscular fat for a more accurate analysis. This experiment was conducted by varying window level (WL), window width (WW), and bit resolutions in order to better understand the effects of the parameters on the model performance. Our best model, fine-tuned on 250 training images and ground truth labels, achieves 0.93 ± 0.02 Dice similarity coefficient (DSC) and 3.68 ± 2.29% difference between predicted and ground truth muscle CSA on 150 held-out test cases. Ultimately, the fully automated segmentation system can be embedded into the clinical environment to accelerate the quantification of muscle and expanded to volume analysis of 3D datasets.

BMI and WHR Are Reflected in Female Facial Shape and Texture: A Geometric Morphometric Image Analysis

PubMed Central

Mayer, Christine; Windhager, Sonja; Schaefer, Katrin; Mitteroecker, Philipp

2017-01-01

Facial markers of body composition are frequently studied in evolutionary psychology and are important in computational and forensic face recognition. We assessed the association of body mass index (BMI) and waist-to-hip ratio (WHR) with facial shape and texture (color pattern) in a sample of young Middle European women by a combination of geometric morphometrics and image analysis. Faces of women with high BMI had a wider and rounder facial outline relative to the size of the eyes and lips, and relatively lower eyebrows. Furthermore, women with high BMI had a brighter and more reddish skin color than women with lower BMI. The same facial features were associated with WHR, even though BMI and WHR were only moderately correlated. Yet BMI was better predictable than WHR from facial attributes. After leave-one-out cross-validation, we were able to predict 25% of variation in BMI and 10% of variation in WHR by facial shape. Facial texture predicted only about 3–10% of variation in BMI and WHR. This indicates that facial shape primarily reflects total fat proportion, rather than the distribution of fat within the body. The association of reddish facial texture in high-BMI women may be mediated by increased blood pressure and superficial blood flow as well as diet. Our study elucidates how geometric morphometric image analysis serves to quantify the effect of biological factors such as BMI and WHR to facial shape and color, which in turn contributes to social perception. PMID:28052103

Long Term Analysis of Deformations in Salt Mines: Kłodawa Salt Mine Case Study, Central Poland

NASA Astrophysics Data System (ADS)

Cała, Marek; Tajduś, Antoni; Andrusikiewicz, Wacław; Kowalski, Michał; Kolano, Malwina; Stopkowicz, Agnieszka; Cyran, Katarzyna; Jakóbczyk, Joanna

2017-09-01

Located in central Poland, the Kłodawa salt dome is 26 km long and about 2 km wide. Exploitation of the dome started in 1956, currently rock salt extraction is carried out in 7 mining fields and the 12 mining levels at the depth from 322 to 625 meters below sea level (m.b.s.l.). It is planned to maintain the mining activity till 2052 and extend rock salt extraction to deeper levels. The dome is characterised by complex geological structure resulted from halokinetic and tectonic processes. Projection of the 3D numerical analysis took into account the following factors: mine working distribution within the Kłodawa mine (about 1000 rooms, 350 km of galleries), complex geological structure of the salt dome, complicated structure and geometry of mine workings and distinction in rocks mechanical properties e.g. rock salt and anhydrite. Analysis of past mine workings deformation and prediction of future rock mass behaviour was divided into four stages: building of the 3D model (state of mine workings in year 2014), model extension of the future mine workings planned for extraction in years 2015-2052, the 3D model calibration and stability analysis of all mine workings. The 3D numerical model of Kłodawa salt mine included extracted and planned mine workings in 7 mining fields and 14 mining levels (about 2000 mine workings). The dimensions of the model were 4200 m × 4700 m × 1200 m what was simulated by 33 million elements. The 3D model was calibrated on the grounds of convergence measurements and laboratory tests. Stability assessment of mine workings was based on analysis of the strength/stress ratio and vertical stress. The strength/stress ratio analysis enabled to indicate endangered area in mine workings and can be defined as the factor of safety. Mine workings in state close to collapse are indicated by the strength/stress ratio equals 1. Analysis of the vertical stress in mine workings produced the estimation of current state of stress in comparison to initial (pre-mining) conditions. The long-term deformation analysis of the Kłodawa salt mine for year 2014 revealed that stability conditions were fulfilled. Local disturbances indicated in the numerical analysis were connected with high chambers included in the mining field no 1 and complex geological structure in the vicinity of mine workings located in the mining fields no 2 and 3. Moreover, numerical simulations that projected the future extraction progress (till year 2052) showed positive performance. Local weakness zones in the mining field no 7 are associated with occurrence of carnallite layers and intensive mining which are planned in the mining field no 6 at the end of rock salt extraction.

A history of semi-active laser dome and window materials

NASA Astrophysics Data System (ADS)

Sullivan, Roger M.

2014-05-01

Semi-Active Laser (SAL) guidance systems were developed starting in the mid-1960's and today form an important class of precision guided weapons. The laser wavelengths generally fall in the short wave infrared region of the spectrum. Relative to passive, image based, infrared seekers the optical demands placed on the domes or windows of SAL seekers is very modest, allowing the use of low cost, easily manufactured materials, such as polycarbonate. This paper will examine the transition of SAL window and dome science and technology from the laboratory to battlefield, with special emphasis on the story of polycarbonate domes.

Merapi 2010 eruption—Chronology and extrusion rates monitored with satellite radar and used in eruption forecasting

USGS Publications Warehouse

Pallister, John S.; Schneider, David; Griswold, Julia P.; Keeler, Ronald H.; Burton, William C.; Noyles, Christopher; Newhall, Christopher G.; Ratdomopurbo, Antonius

2013-01-01

Despite dense cloud cover, satellite-borne commercial Synthetic Aperture Radar (SAR) enabled frequent monitoring of Merapi volcano's 2010 eruption. Near-real-time interpretation of images derived from the amplitude of the SAR signals and timely delivery of these interpretations to those responsible for warnings, allowed satellite remote sensing for the first time to play an equal role with in situ seismic, geodetic and gas monitoring in guiding life-saving decisions during a major volcanic crisis. Our remotely sensed data provide an observational chronology for the main phase of the 2010 eruption, which lasted 12 days (26 October–7 November, 2010). Unlike the prolonged low-rate and relatively low explosivity dome-forming and collapse eruptions of recent decades at Merapi, the eruption began with an explosive eruption that produced a new summit crater on 26 October and was accompanied by an ash column and pyroclastic flows that extended 8 km down the flanks. This initial explosive event was followed by smaller explosive eruptions on 29 October–1 November, then by a period of rapid dome growth on 1–4 November, which produced a summit lava dome with a volume of ~ 5 × 106 m3. A paroxysmal VEI 4 magmatic eruption (with ash column to 17 km altitude) destroyed this dome, greatly enlarged the new summit crater and produced extensive pyroclastic flows (to ~ 16 km radial distance in the Gendol drainage) and surges during the night of 4–5 November. The paroxysmal eruption was followed by a period of jetting of gas and tephra and by a second short period (12 h) of rapid dome growth on 6 November. The eruption ended with low-level ash and steam emissions that buried the 6 November dome with tephra and continued at low levels until seismicity decreased to background levels by about 23 November. Our near-real-time commercial SAR documented the explosive events on 26 October and 4–5 November and high rates of dome growth (> 25 m3 s− 1). An event tree analysis for the previous 2006 Merapi eruption indicated that for lava dome extrusion rates > 1.2 m3 s− 1, the probability of a large (1872-scale) eruption was ~ 10%. Consequently, the order-of-magnitude greater rates in 2010, along with the explosive start of the eruption on 26 October, the large volume of lava accumulating at the summit by 4 November, and the rapid and large increases in seismic energy release, deformation and gas emissions were the basis for warnings of an unusually large eruption by the Indonesian Geological Agency's Center for Volcanology and Geologic Hazard Mitigation (CVGHM) and their Volcano Research and Technology Development Center (BPPTK) in Yogyakarta — warnings that saved thousands of lives.

Geometric Morphometrics on Gene Expression Patterns Within Phenotypes: A Case Example on Limb Development

PubMed Central

Martínez-Abadías, Neus; Mateu, Roger; Niksic, Martina; Russo, Lucia; Sharpe, James

2016-01-01

How the genotype translates into the phenotype through development is critical to fully understand the evolution of phenotypes. We propose a novel approach to directly assess how changes in gene expression patterns are associated with changes in morphology using the limb as a case example. Our method combines molecular biology techniques, such as whole-mount in situ hybridization, with image and shape analysis, extending the use of Geometric Morphometrics to the analysis of nonanatomical shapes, such as gene expression domains. Elliptical Fourier and Procrustes-based semilandmark analyses were used to analyze the variation and covariation patterns of the limb bud shape with the expression patterns of two relevant genes for limb morphogenesis, Hoxa11 and Hoxa13. We devised a multiple thresholding method to semiautomatically segment gene domains at several expression levels in large samples of limb buds from C57Bl6 mouse embryos between 10 and 12 postfertilization days. Besides providing an accurate phenotyping tool to quantify the spatiotemporal dynamics of gene expression patterns within developing structures, our morphometric analyses revealed high, non-random, and gene-specific variation undergoing canalization during limb development. Our results demonstrate that Hoxa11 and Hoxa13, despite being paralogs with analogous functions in limb patterning, show clearly distinct dynamic patterns, both in shape and size, and are associated differently with the limb bud shape. The correspondence between our results and already well-established molecular processes underlying limb development confirms that this morphometric approach is a powerful tool to extract features of development regulating morphogenesis. Such multilevel analyses are promising in systems where not so much molecular information is available and will advance our understanding of the genotype–phenotype map. In systematics, this knowledge will increase our ability to infer how evolution modified a common developmental pattern to generate a wide diversity of morphologies, as in the vertebrate limb. PMID:26377442

Leaf Morphology, Taxonomy and Geometric Morphometrics: A Simplified Protocol for Beginners

PubMed Central

Viscosi, Vincenzo; Cardini, Andrea

2011-01-01

Taxonomy relies greatly on morphology to discriminate groups. Computerized geometric morphometric methods for quantitative shape analysis measure, test and visualize differences in form in a highly effective, reproducible, accurate and statistically powerful way. Plant leaves are commonly used in taxonomic analyses and are particularly suitable to landmark based geometric morphometrics. However, botanists do not yet seem to have taken advantage of this set of methods in their studies as much as zoologists have done. Using free software and an example dataset from two geographical populations of sessile oak leaves, we describe in detailed but simple terms how to: a) compute size and shape variables using Procrustes methods; b) test measurement error and the main levels of variation (population and trees) using a hierachical design; c) estimate the accuracy of group discrimination; d) repeat this estimate after controlling for the effect of size differences on shape (i.e., allometry). Measurement error was completely negligible; individual variation in leaf morphology was large and differences between trees were generally bigger than within trees; differences between the two geographic populations were small in both size and shape; despite a weak allometric trend, controlling for the effect of size on shape slighly increased discrimination accuracy. Procrustes based methods for the analysis of landmarks were highly efficient in measuring the hierarchical structure of differences in leaves and in revealing very small-scale variation. In taxonomy and many other fields of botany and biology, the application of geometric morphometrics contributes to increase scientific rigour in the description of important aspects of the phenotypic dimension of biodiversity. Easy to follow but detailed step by step example studies can promote a more extensive use of these numerical methods, as they provide an introduction to the discipline which, for many biologists, is less intimidating than the often inaccessible specialistic literature. PMID:21991324

Nerve growth factor induced changes in the Golgi apparatus of PC-12 rat pheochromocytoma cells as studied by ligand endocytosis, cytochemical and morphometric methods.

PubMed

Hickey, W F; Stieber, A; Hogue-Angeletti, R; Gonatas, J; GOnatas, N K

1983-10-01

Cells of the PC-12 rat pheochromocytoma cell line respond to nerve growth factor (NGF) by sprouting neurites and biochemically differentiating into sympathetic ganglion-like cells. NGF-stimulated ('differentiated') and unstimulated ('undifferentiated') cells were studied by cytochemical techniques for the localization of the enzymes acid phosphatase (ACPase) and thiamine pyrophosphatase (TPPase), and by a morphometric analysis of the distribution of endocytosed wheat-germ agglutinin labelled with horseradish peroxidase (WGA-HRP). Both cytochemical stains showed the enzymes to be distributed in lysosomes and certain cisternae of the Golgi apparatus in both NGF stimulated and unstimulated cells. ACPase was not confined to GERL (Golgi-endoplasmic reticulum-lysosome) as in certain other cells. The morphometric studies demonstrated that the reaction product of the internalized WGA-HRP occupied 4.7% of the cytoplasmic area in unstimulated cells and 4.5% in NGF-stimulated ones. Despite this similarity, the distribution of the WGA-HRP among the studied intracellular compartments in these two cell groups varied. In the NGF-stimulated cells 3.3% of the WGA-HRP reaction product was found in the innermost Golgi cisterna(e) while in unstimulated cells only 0.3% was seen in this compartment. Similarly, 4.3% of the WGA-HRP stain was found in small vesicles at the 'trans' aspect of the Golgi apparatus in stimulated cells, when only 0.3% of the stain occupied this compartment in 'undifferentiated' cells. The morphometric analysis also revealed that when the PC-12 cells were stimulated with NGF, the Golgi apparatus increased in area by approximately 70%. These findings are consistent with the hypothesis that NGF induced differentiation of PC-12 cells is coupled with enhanced endocytosis of WGA and probably of its 'receptor' to the innermost Golgi cisterna(e) and the closely associated vesicles.

A comparison between semi-spheroid- and dome-shaped quantum dots coupled to wetting layer

DOE Office of Scientific and Technical Information (OSTI.GOV)

Shahzadeh, Mohammadreza; Sabaeian, Mohammad, E-mail: Sabaeian@scu.ac.ir

2014-06-15

During the epitaxial growth method, self-assembled semi-spheroid-shaped quantum dots (QDs) are formed on the wetting layer (WL). However for sake of simplicity, researchers sometimes assume semi-spheroid-shaped QDs to be dome-shaped (hemisphere). In this work, a detailed and comprehensive study on the difference between electronic and transition properties of dome- and semi-spheroid-shaped quantum dots is presented. We will explain why the P-to-S intersubband transition behaves the way it does. The calculated results for intersubband P-to-S transition properties of quantum dots show two different trends for dome-shaped and semi-spheroid-shaped quantum dots. The results are interpreted using the probability of finding electron insidemore » the dome/spheroid region, with emphasis on the effects of wetting layer. It is shown that dome-shaped and semi-spheroid-shaped quantum dots feature different electronic and transition properties, arising from the difference in lateral dimensions between dome- and semi-spheroid-shaped QDs. Moreover, an analogy is presented between the bound S-states in the quantum dots and a simple 3D quantum mechanical particle in a box, and effective sizes are calculated. The results of this work will benefit researchers to present more realistic models of coupled QD/WL systems and explain their properties more precisely.« less

Improvement of Insulin Secretion and Pancreatic β-cell Function in Streptozotocin-induced Diabetic Rats Treated with Aloe vera Extract

PubMed Central

Noor, Ayesha; Gunasekaran, S.; Vijayalakshmi, M. A.

2017-01-01

Background: Diabetes mellitus is a metabolic disorder characterized by chronic hyperglycemia. Plant extracts and their products are being used as an alternative system of medicine for the treatment of diabetes. Aloe vera has been traditionally used to treat several diseases and it exhibits antioxidant, anti-inflammatory, and wound-healing effects. Streptozotocin (STZ)-induced Wistar diabetic rats were used in this study to understand the potential protective effect of A. vera extract on the pancreatic islets. Objective: The aim of the present study was to evaluate the A. vera extract on improvement of insulin secretion and pancreatic β-cell function by morphometric analysis of pancreatic islets in STZ-induced diabetic Wistar rats. Materials and Methods: After acclimatization, male Wistar rats, maintained as per the Committee for the Purpose of Control and Supervision of Experiments on Animals guidelines, were randomly divided into four groups of six rats each. Fasting plasma glucose and insulin levels were assessed. The effect of A. vera extract in STZ-induced diabetic rats on the pancreatic islets by morphometric analysis was evaluated. Results: Oral administration of A. vera extract (300 mg/kg) daily to diabetic rats for 3 weeks showed restoration of blood glucose levels to normal levels with a concomitant increase in insulin levels upon feeding with A. vera extract in STZ-induced diabetic rats. Morphometric analysis of pancreatic sections revealed quantitative and qualitative gain in terms of number, diameter, volume, and area of the pancreatic islets of diabetic rats treated with A. vera extract when compared to the untreated diabetic rats. Conclusion: A. vera extract exerts antidiabetic effects by improving insulin secretion and pancreatic β-cell function by restoring pancreatic islet mass in STZ-induced diabetic Wistar rats. SUMMARY Fasting plasma glucose (FPG) and insulin levels were restored to normal levels in diabetic rats treated with Aloe vera extractIslets of pancreas were qualitatively and quantitatively restored to normalcy leading to restoration of FPG and insulin levels of diabetic rats treated with Aloe vera extractMorphometric analysis of pancreatic sections revealed quantitative and qualitative gain in terms of number, diameter, volume, and area of the pancreatic islets of diabetic rats treated with Aloe vera extract when compared to the untreated diabetic rats. Abbreviations Used: A. vera, FPG: Fasting plasma glucose, STZ: Streptozotocin, BW: Body weight PMID:29333050

Assessment of the impact of the scanner-related factors on brain morphometry analysis with Brainvisa

PubMed Central

2011-01-01

Background Brain morphometry is extensively used in cross-sectional studies. However, the difference in the estimated values of the morphometric measures between patients and healthy subjects may be small and hence overshadowed by the scanner-related variability, especially with multicentre and longitudinal studies. It is important therefore to investigate the variability and reliability of morphometric measurements between different scanners and different sessions of the same scanner. Methods We assessed the variability and reliability for the grey matter, white matter, cerebrospinal fluid and cerebral hemisphere volumes as well as the global sulcal index, sulcal surface and mean geodesic depth using Brainvisa. We used datasets obtained across multiple MR scanners at 1.5 T and 3 T from the same groups of 13 and 11 healthy volunteers, respectively. For each morphometric measure, we conducted ANOVA analysis and verified whether the estimated values were significantly different across different scanners or different sessions of the same scanner. The between-centre and between-visit reliabilities were estimated from their contribution to the total variance, using a random-effects ANOVA model. To estimate the main processes responsible for low reliability, the results of brain segmentation were compared to those obtained using FAST within FSL. Results In a considerable number of cases, the main effects of both centre and visit factors were found to be significant. Moreover, both between-centre and between-visit reliabilities ranged from poor to excellent for most morphometric measures. A comparison between segmentation using Brainvisa and FAST revealed that FAST improved the reliabilities for most cases, suggesting that morphometry could benefit from improving the bias correction. However, the results were still significantly different across different scanners or different visits. Conclusions Our results confirm that for morphometry analysis with the current version of Brainvisa using data from multicentre or longitudinal studies, the scanner-related variability must be taken into account and where possible should be corrected for. We also suggest providing some flexibility to Brainvisa for a step-by-step analysis of the robustness of this package in terms of reproducibility of the results by allowing the bias corrected images to be imported from other packages and bias correction step be skipped, for example. PMID:22189342

Morphological and clinical risk factors for posterior communicating artery aneurysm rupture.

PubMed

Matsukawa, Hidetoshi; Fujii, Motoharu; Akaike, Gensuke; Uemura, Akihiro; Takahashi, Osamu; Niimi, Yasunari; Shinoda, Masaki

2014-01-01

Recent studies have shown that posterior circulation aneurysms, specifically posterior communicating artery (PCoA) aneurysms, are more likely to rupture than other aneurysms. To date, few studies have investigated the factors contributing to PCoA aneurysm rupture. The authors aimed to identify morphological and clinical characteristics predisposing to PCoA aneurysm rupture. The authors retrospectively reviewed 134 consecutive patients with PCoA aneurysms managed at their facility between July 2003 and December 2012. The authors divided patients into groups of those with aneurysmal rupture (n = 39) and without aneurysmal rupture (n = 95) and compared morphological and clinical characteristics. Morphological characteristics were mainly evaluated by 3D CT angiography and included diameter of arteries (anterior cerebral artery, middle cerebral artery, and internal carotid artery), size of the aneurysm, dome-to-neck ratio, neck direction of the aneurysmal dome around the PCoA (medial, lateral, superior, inferior, and posterior), aneurysm bleb formation, whether the PCoA was fetal type, and the existence of other intracranial unruptured aneurysm(s). Patients with ruptured PCoA aneurysms were significantly younger (a higher proportion were < 60 years of age) and a significantly higher proportion of patients with ruptured PCoA aneurysms showed a lateral direction of the aneurysmal dome around the PCoA, had bleb formation, and the aneurysm was > 7 mm in diameter and/or the dome-to-neck ratio was > 2.0. Multivariate logistic regression analysis showed age < 60 years (OR 4.3, p = 0.011), history of hypertension (OR 5.1, p = 0.008), lateral direction of the aneurysmal dome around the PCoA (OR 6.7, p = 0.0001), and bleb formation (OR 11, p < 0.0001) to be significantly associated with PCoA aneurysm rupture. The present results demonstrated that lateral projection of a PCoA aneurysm may be related to rupture.

Multispectral Observations of Explosive Gas Emissions from Santiaguito, Guatemala

NASA Astrophysics Data System (ADS)

Carn, S. A.; Watson, M.; Thomas, H.; Rodriguez, L. A.; Campion, R.; Prata, F. J.

2016-12-01

Santiaguito volcano, Guatemala, has been persistently active for decades, producing frequent explosions from its actively growing lava dome. Repeated release of volcanic gases contains information about conduit processes during the cyclical explosions at Santiaguito, but the composition of the gas phase and the amount of volatiles released in each explosion remains poorly constrained. In addition to its persistent activity, Santiaguito offers an exceptional opportunity to investigate lava dome degassing processes since the upper surface of the active lava dome can be viewed from the summit of neighboring Santa Maria. In January 2016 we conducted multi-spectral observations of Santiaguito's explosive eruption plumes and passive degassing from multiple perspectives as part of the first NSF-sponsored `Workshop on Volcanoes' instrument deployment. Gas measurements included open-path Fourier-Transform infrared (OP-FTIR) spectroscopy from the Santa Maria summit, coincident with ultraviolet (UV) and infrared (IR) camera and UV Differential Optical Absorption Spectroscopy (DOAS) from the El Mirador site below Santiaguito's active Caliente lava dome. Using the OP-FTIR in passive mode with the Caliente lava dome as the source of IR radiation, we were able to collect IR spectra at high temporal resolution prior to and during two explosions of Santiaguito on 7-8 January, with volcanic SO2 and H2O emissions detected. UV and IR camera data provide constraints on the total SO2 burden in the emissions (and potentially the volcanic ash burden), which coupled with the FTIR gas ratios provides new constraints on the mass and composition of volatiles driving explosions at Santiaguito. All gas measurements indicate significant volatile release during explosions with limited degassing during repose periods. In this presentation we will present ongoing analysis of the unique Santiaguito gas dataset including estimation of the total volatile mass released in explosions and an intercomparison of SO2 amounts recorded by the UV and IR instruments.

The research of conformal optical design

NASA Astrophysics Data System (ADS)

Li, Lin; Li, Yan; Huang, Yi-fan; Du, Bao-lin

2009-07-01

Conformal optical domes are characterized as having external more elongated optical surfaces that are optimized to minimize drag, increased missile velocity and extended operational range. The outer surface of the conformal domes typically deviate greatly from spherical surface descriptions, so the inherent asymmetry of conformal surfaces leads to variations in the aberration content presented to the optical sensor as it is gimbaled across the field of regard, which degrades the sensor's ability to properly image targets of interest and then undermine the overall system performance. Consequently, the aerodynamic advantages of conformal domes cannot be realized in practical systems unless the dynamic aberration correction techniques are developed to restore adequate optical imaging capabilities. Up to now, many optical correction solutions have been researched in conformal optical design, including static aberrations corrections and dynamic aberrations corrections. There are three parts in this paper. Firstly, the combination of static and dynamic aberration correction is introduced. A system for correcting optical aberration created by a conformal dome has an outer surface and an inner surface. The optimization of the inner surface is regard as the static aberration correction; moreover, a deformable mirror is placed at the position of the secondary mirror in the two-mirror all reflective imaging system, which is the dynamic aberration correction. Secondly, the using of appropriate surface types is very important in conformal dome design. Better performing optical systems can result from surface types with adequate degrees of freedom to describe the proper corrector shape. Two surface types and the methods of using them are described, including Zernike polynomial surfaces used in correct elements and user-defined surfaces used in deformable mirror (DM). Finally, the Adaptive optics (AO) correction is presented. In order to correct the dynamical residual aberration in conformal optical design, the SPGD optimization algorithm is operated at each zoom position to calculate the optimized surface shape of the MEMS DM. The communication between MATLAB and Code V established via ActiveX technique is applied in simulation analysis.

Paleaostress/strain study and its implications for the geodynamic history of the Jabal Akhdar Dome (Oman)

NASA Astrophysics Data System (ADS)

Scharf, Andreas; Amrouch, Khalid; Mattern, Frank

2016-04-01

Field observations, including oolite-, styolite, fracture analyses combined with laboratory measurements using calcite twin analysis show a ductile-to-brittle multiple-phase deformation history of the Arabian carbonate platform, ranging from Late Cretaceous to Neogene times. The Arabian carbonate platform, belonging to a passive continental margin since the Late Permian, was the site of the obduction of Tethyan oceanic lithosphere (Semail Ophiolite) during the Late Cretaceous, caused by the northward drift of Africa (Hanna, 1995). After or during the obduction, large parts of the entire nape pile composed of the Arabian platform and the Hawasina/Semail nappes, where folded and exhumed. This led to the exhumation of the Jabal Akhdar Dome. Our oolite samples from the Jabal Akhdar Dome and from below the ophiolite thrust reveal the strain ellipsoid related to the obduction. This strain ellipsoid shows components of pure and simple shear. In the latter case the longest axes of the strain ellipsoid are parallelly oriented to the direction of obduction (NE to SW), which is in good agreement with the direction of obduction as depicted by Hacker et al. (1996) for the study area. The pure-shear component (flattening) is interpreted to be a result of the overburden of the up to 7 km thick oceanic lithosphere. The oolites that are located approximately 200 m below the ophiolite thrust contact provide evidence for ductile deformation during the Late Cretaceous. These results are compared with strain and stress tensors obtained from styolites, calcite twins and fracture analyses, derived from the uppermost part of the Arabian platform of the Jabal Akhdar Dome. Our results show a complex and detailed structural deformation of the post-obduction history of the Jabal Akhdar Dome, including its folding and exhumation. Hanna, S. (1995) Field guide to the Geology of Oman. Ruwi (Historical Association of Oman. 178 pp. Hacker, B.R., Mosenfelder, J.L. & Gnos, E. (1996) Rapid emplacement of the Oman ophiolite: Thermal and geochronological constraints. Tectonics, 15(6), 1230-1247.

Heterotopic Prostate at Autopsy- An Unusual Mass at the Dome of the Urinary Bladder.

PubMed

Munde, Shital; Fernandes, Gwendolyn; Phadnis, Priyanka

2017-09-01

Heterotopic prostate in the dome of the urinary bladder is extremely rare and difficult to diagnose. It is often mistaken for neoplastic masses and histopathological examination is warranted for diagnosis. We report an autopsy case of an ectopic prostate at the dome of the bladder which mimicked a neoplasm on gross pathology.

The Mairan domes: silicic volcanic constructs on the Moon

USGS Publications Warehouse

Glotch, Timothy D.; Hagerty, Justin J.; Lucey, Paul G.; Hawke, B. Ray; Giguere, Thomas A.; Arnold, Jessica A.; Williams, Jean-Pierre; Jolliff, Bradley L.; Paige, David A.

2011-01-01

The Mairan domes are four features located in northern Oceanus Procellarum at ∼312.3E, 41.4N on the Moon. High resolution visible imagery, visible-to-mid-IR spectra, and Lunar Prospector Th abundance data all indicate that these four domes have a composition that is consistent with derivation from a Si-rich, highly evolved magma.

Intracratonic exhumation and uplift: Insight from low-temperature thermochronology and geomorphic analysis of the Ozark Plateau, Missouri

NASA Astrophysics Data System (ADS)

DeLucia, M. S.; Marshak, S.; Guenthner, W.; Anders, A. M.; Thomson, S. N.

2016-12-01

The Ozark Plateau is an uplift in the cratonic platform of Midcontinent United States. In the northeast corner of the plateau (the St. Francois Mountains), Precambrian basement of 1.47 Ga granite and rhyolite crops out. These rocks are overlain, at the Great Unconformity, by Paleozoic strata, defining the map pattern of the Ozark Dome. Strata thicken substantially eastward into the Illinois Basin, so that there is over 7 km of structural relief across the boundary between the Illinois Basin and the Ozark Dome at the level of the Great Unconformity. Multiple unconformities in the Paleozoic section indicates that the crest of the Ozark Dome was at or above sea level several times during the Paleozoic. Key questions about the Plateau remain. For example: (1) Did the 1.47 Ga basement remain at upper-crustal depths since its formation, or was it buried deeply and later exhumed? (2) Has the plateau remained high since the Paleozoic or has it undergone post-Paleozoic uplift? Results from new zircon (U-Th)/He thermochronology indicate that the 1.47 Ga granites were exhumed significantly in the Neoproterozoic (about 750Ma), after the Rodinia supercontinent assembly. Fission-track dates (Brown, 2005) and (U-Th)/He apatite dates (Flowers and Kelley, 2011; Zhang et al., 2012; and new results) hint that some post-Paleozoic exhumation has occurred. Analysis of a high-resolution DEM of the Ozark Plateau supports this proposal; bedrock-incising streams occur throughout the plateau (locally producing incised meanders), and strath terraces can be identified. The rate of uplift, however, must be relatively slow, for drainages do not display knick points, and drainage networks display mature profiles. Given these constraints, we propose that the lithospheric architecture that distinguished the Ozark Dome from the Illinois Basin became established in the Neoproterozoic, and that the Ozark Plateau has been maintained isostatically by subsequent slow exhumation.

Near-surface gas mapping studies of salt geologic features at Weeks Island and other sites

DOE Office of Scientific and Technical Information (OSTI.GOV)

Molecke, M.A.; Carney, K.R.; Autin, W.J.

1996-10-01

Field sampling and rapid gas analysis techniques were used to survey near-surface soil gases for geotechnical diagnostic purposes at the Weeks Island Strategic Petroleum Reserve (SPR) site and other salt dome locations in southern Louisiana. This report presents the complete data, results and interpretations obtained during 1995. Weeks Island 1994 gas survey results are also briefly summarized; this earlier study did not find a definitive correlation between sinkhole No. 1 and soil gases. During 1995, several hundred soil gas samples were obtained and analyzed in the field by gas chromatography, for profiling low concentrations and gas anomalies at ppm tomore » percent levels. The target gases included hydrogen, methane, ethane and ethylene. To supplement the field data, additional gas samples were collected at various site locations for laboratory analysis of target gases at ppb levels. Gases in the near-surface soil originate predominantly from the oil, from petrogenic sources within the salt, or from surface microbial activity. Surveys were conducted across two Weeks Island sinkholes, several mapped anomalous zones in the salt, and over the SPR repository site and its perimeter. Samples were also taken at other south Louisiana salt dome locations for comparative purposes. Notable results from these studies are that elevated levels of hydrogen and methane (1) were positively associated with anomalous gassy or shear zones in the salt dome(s) and (2) are also associated with suspected salt fracture (dilatant) zones over the edges of the SPR repository. Significantly elevated areas of hydrogen, methane, plus some ethane, were found over anomalous shear zones in the salt, particularly in a location over high pressure gas pockets in the salt, identified in the mine prior to SPR operations. Limited stable isotope ratio analyses, SIRA, were also conducted and determined that methane samples were of petrogenic origin, not biogenic.« less

A New Perspective on Mount St. Helens - Dramatic Landform Change and Associated Hazards at the Most Active Volcano in the Cascade Range

USGS Publications Warehouse

Ramsey, David W.; Driedger, Carolyn L.; Schilling, Steve P.

2008-01-01

Mount St. Helens has erupted more frequently than any other volcano in the Cascade Range during the past 4,000 years. The volcano has exhibited a variety of eruption styles?explosive eruptions of pumice and ash, slow but continuous extrusions of viscous lava, and eruptions of fluid lava. Evidence of the volcano?s older eruptions is recorded in the rocks that build and the deposits that flank the mountain. Eruptions at Mount St. Helens over the past three decades serve as reminders of the powerful geologic forces that are reshaping the landscape of the Pacific Northwest. On May 18, 1980, a massive landslide and catastrophic explosive eruption tore away 2.7 cubic kilometers of the mountain and opened a gaping, north-facing crater. Lahars flowed more than 120 kilometers downstream, destroying bridges, roads, and buildings. Ash from the eruption fell as far away as western South Dakota. Reconstruction of the volcano began almost immediately. Between 1980 and 1986, 80 million cubic meters of viscous lava extruded episodically onto the crater floor, sometimes accompanied by minor explosions and small lahars. A lava dome grew to a height of 267 meters, taller than the highest buildings in the nearby city of Portland, Oregon. Crater Glacier formed in the deeply shaded niche between the 1980-86 lava dome and the south crater wall. Its tongues of ice flowed around the east and west sides of the dome. Between 1989 and 1991, multiple explosions of steam and ash rocked the volcano, possibly a result of infiltrating rainfall being heated in the still-hot interior of the dome and underlying crater floor. In September 2004, rising magma caused earthquake swarms and deformation of the crater floor and glacier, which indicated that Mount St. Helens might erupt again soon. On October 1, 2004, a steam and ash explosion signaled the beginning of a new phase of eruptive activity at the volcano. On October 11, hot rock reached the surface and began building a new lava dome immediately south of the 1980-86 lava dome. The erupting lava cleaved Crater Glacier in half and bulldozed it aside, causing thickening, crevassing, and rapid northward advance of the glacier?s east and west arms. Intermittent steam and ash explosions, some generating plumes that rose up to 11 kilometers, preceded and accompanied extrusion of the new lava dome, but ceased by early 2005. As the new dome grew, a series of large fins or spines of hot lava rose, some more than 100 meters high, and then crumbled producing sometimes spectacular rock falls. The largest of these rock falls generated dust or steam plumes that rose high above the crater rim. By February 2006, the new dome had grown to a volume similar to that of the 1980-86 lava dome; and by July 2007, the new dome had grown to a volume of 93 million cubic meters, exceeding the volume of the 1980-86 lava dome. The height of the new dome also exceeded that of the 1980-86 lava dome, and at its highest point (before collapse in 2005) reached to within 2 meters of the lowest point on the south crater rim. At this height, the new dome was taller than the Empire State Building in New York City. The new lava dome initially grew very quickly, at rates of 2 to 3 cubic meters (one small dump truck load) per second. If it had continued to grow at these rates for about 100 years, it would have replaced the volume of rock removed from the volcano during the May 18, 1980, eruption. However, the lava extrusion rate slowed throughout the eruption, and, by July 2007, it was oozing at a rate of 0.1 cubic meters per second. At that rate, it would take over 700 years to replace the volume of rock lost in 1980. Lava dome extrusion has continued into early 2008.

Venus steep-sided domes: Relationships between geological associations and possible petrogenetic models

NASA Technical Reports Server (NTRS)

Pavri, B.; Head, James W., III

1992-01-01

Venus domes are characterized by steep sides, a circular shape, and a relatively flat summit area. In addition, they are orders of magnitude larger in volume and have a lower height/diameter ratio than terrestrial silicic lava domes. The morphology of the domes is consistent with formation by lava with a high apparent viscosity. Twenty percent of the domes are located in or near tessera (highly deformed highlands), while most other (62 percent) are located in and near coronae (circular deformational features thought to represent local mantle upwelling). These geological associations provide evidence for mechanisms of petrogenesis and several of these models are found to be plausible: remelting of basaltic or evolved crust, differentiation of basaltic melts, and volatile enhancement and eruption of basaltic foams. Hess and Head have shown that the full range of magma compositions existing on the Earth is plausible under various environmental conditions on Venus. Most of the Venera and Vego lander compostional data are consistent with tholeiitic basalt; however, evidence for evolved magmas was provided by Venera 8 data consistent with a quartz monzonite composition. Pieters et al. have examined the color of the Venus surface from Venera lander images and interpret the surface there to be oxidized. Preliminary modeling of dome growth has provided some interpretations of lava rheology. Viscosity values obtained from these models range from 10(exp 14) - 10(exp 17) pa*s, and the yield strength has been calculated to be between 10(exp 4) and 10(exp 6) Pa, consistent with terrestrial silicic rocks. The apparent high viscosity of the dome lavas suggests that the domes have a silicic composition or must augment their viscosity with increased visicularity or crystal content. Sixty-two percent of the Venus domes are associated with coronae, circular features that have been proposed as sites of mantle upwelling, and 20 percent of the domes are located near tessera, relatively high areas of complex deformed terrain. We have investigated several models that are consistent with these geologic associations. The first case involves the differentiation of basalt in a magma reservoir in the crust, perhaps produced by partial melting within a mantle plume. The second case is melting at the base of thickened basaltic crust, and the final case is volatile exsolution and enhancement within a basaltic magma reservoir. The association of domes with tessera might be explained by crustal remelting, while the association with coronae may be consistent with chemical differentiation of a magma reservoir or the exsolution and concentration of volatiles in the reservoir before eruption.

Arthroscopic Talar Dome Access Using a Standard Versus Wire-Based Traction Method for Ankle Joint Distraction.

PubMed

Barg, Alexej; Saltzman, Charles L; Beals, Timothy C; Bachus, Kent N; Blankenhorn, Brad D; Nickisch, Florian

2016-07-01

To evaluate the accessibility of the talar dome through anterior and posterior portals for ankle arthroscopy with the standard noninvasive distraction versus wire-based longitudinal distraction using a tensioned wire placed transversely through the calcaneal tuberosity. Seven matched pairs of thigh-to-foot specimens underwent ankle arthroscopy with 1 of 2 methods of distraction: a standard noninvasive strapping technique or a calcaneal tuberosity wire-based technique. The order of the arthroscopic approach and use of a distraction method was randomly determined. The areas accessed from both 2-portal anterior and 2-portal posterior approaches were determined by using a molded translucent grid. The mean talar surface accessible by anterior ankle arthroscopy was comparable with noninvasive versus calcaneal wire distraction with 57.8% ± 17.2% (range, 32.9% to 75.7%) versus 61.5% ± 15.2% (range, 38.5% to 79.1%) of the talar dome, respectively (P = .590). The use of calcaneal wire distraction significantly improved posterior talar dome accessibility compared with noninvasive distraction, with 56.4% ± 20.0% (range, 14.4% to 78.0%) versus 39.8% ± 14.9% (range, 20.0% to 57.6%) of the talar dome, respectively (P = .031). Under the conditions studied, our cadaveric model showed equivalent talar dome access with 2-portal anterior arthroscopy of calcaneal wire-based distraction versus noninvasive strap distraction, but improved access for 2-portal posterior arthroscopy with calcaneal wire-based distraction versus noninvasive strap distraction. The posterior 40% of the talar dome is difficult to access via anterior ankle arthroscopy. Posterior calcaneal tuberosity wire-based longitudinal distraction improved arthroscopic access to the centro-posterior talar dome with a posterior arthroscopic approach. Published by Elsevier Inc.

Characterising volcanic cycles at Soufriere Hills Volcano, Montserrat: Time series analysis of multi-parameter satellite data

NASA Astrophysics Data System (ADS)

Flower, Verity J. B.; Carn, Simon A.

2015-10-01

The identification of cyclic volcanic activity can elucidate underlying eruption dynamics and aid volcanic hazard mitigation. Whilst satellite datasets are often analysed individually, here we exploit the multi-platform NASA A-Train satellite constellation to cross-correlate cyclical signals identified using complementary measurement techniques at Soufriere Hills Volcano (SHV), Montserrat. In this paper we present a Multi-taper (MTM) Fast Fourier Transform (FFT) analysis of coincident SO2 and thermal infrared (TIR) satellite measurements at SHV facilitating the identification of cyclical volcanic behaviour. These measurements were collected by the Ozone Monitoring Instrument (OMI) and Moderate Resolution Imaging Spectroradiometer (MODIS) (respectively) in the A-Train. We identify a correlating cycle in both the OMI and MODIS data (54-58 days), with this multi-week feature attributable to episodes of dome growth. The 50 day cycles were also identified in ground-based SO2 data at SHV, confirming the validity of our analysis and further corroborating the presence of this cycle at the volcano. In addition a 12 day cycle was identified in the OMI data, previously attributed to variable lava effusion rates on shorter timescales. OMI data also display a one week (7-8 days) cycle attributable to cyclical variations in viewing angle resulting from the orbital characteristics of the Aura satellite. Longer period cycles possibly relating to magma intrusion were identified in the OMI record (102-, 121-, and 159 days); in addition to a 238-day cycle identified in the MODIS data corresponding to periodic destabilisation of the lava dome. Through the analysis of reconstructions generated from cycles identified in the OMI and MODIS data, periods of unrest were identified, including the major dome collapse of 20th May 2006 and significant explosive event of 3rd January 2009. Our analysis confirms the potential for identification of cyclical volcanic activity through combined analysis of satellite data, which would be of particular value at poorly monitored volcanic systems.

Instant snapshot of the internal structure of Unzen lava dome, Japan with airborne muography

PubMed Central

Tanaka, Hiroyuki K. M.

2016-01-01

An emerging elementary particle imaging technique called muography has increasingly been used to resolve the internal structures of volcanoes with a spatial resolution of less than 100 m. However, land-based muography requires several days at least to acquire satisfactory image contrast and thus, it has not been a practical tool to diagnose the erupting volcano in a real time manner. To address this issue, airborne muography was implemented for the first time, targeting Heisei-Shinzan lava dome of Unzen volcano, Japan. Obtained in 2.5 hours, the resultant image clearly showed the density contrast inside the dome, which is essential information to predict the magnitude of the dome collapse. Since airborne muography is not restricted by topographic conditions for apparatus placements, we anticipate that the technique is applicable to creating images of this type of lava dome evolution from various angles in real time. PMID:28008978

Catalog of Mount St. Helens 2004-2007 Dome Samples with Major- and Trace-Element Chemistry

USGS Publications Warehouse

Thornber, Carl R.; Pallister, John S.; Rowe, Michael C.; McConnell, Siobhan; Herriott, Trystan M.; Eckberg, Alison; Stokes, Winston C.; Cornelius, Diane Johnson; Conrey, Richard M.; Hannah, Tammy; Taggart, Joseph E.; Adams, Monique; Lamothe, Paul J.; Budahn, James R.; Knaack, Charles M.

2008-01-01

Sampling and analysis of eruptive products at Mount St. Helens is an integral part of volcano monitoring efforts conducted by the U.S. Geological Survey?s Cascades Volcano Observatory (CVO). The objective of our eruption sampling program is to enable petrological assessments of pre-eruptive magmatic conditions, critical for ascertaining mechanisms for eruption triggering and forecasting potential changes in eruption behavior. This report provides a catalog of near-vent lithic debris and new dome-lava collected during 34 intra-crater sampling forays throughout the October 2004 to October 2007 (2004?7) eruptive interval at Mount St. Helens. In addition, we present comprehensive bulk-rock geochemistry for a time-series of representative (2004?7) eruption products. This data, along with that in a companion report on Mount St. Helens 2004 to 2006 tephra by Rowe and others (2008), are presented in support of the contents of the U.S. Geological Survey Professional Paper 1750 (Sherrod and others, eds., 2008). Readers are referred to appropriate chapters in USGS Professional Paper 1750 for detailed narratives of eruptive activity during this time period and for interpretations of sample characteristics and geochemical data. The suite of rock samples related to the 2004?7 eruption of Mount St. Helens and presented in this catalog are archived at the David A. Johnson Cascades Volcano Observatory, Vancouver, Wash. The Mount St. Helens 2004?7 Dome Sample Catalogue with major- and trace-element geochemistry is tabulated in 3 worksheets of the accompanying Microsoft Excel file, of2008-1130.xls. Table 1 provides location and sampling information. Table 2 presents sample descriptions. In table 3, bulk-rock major and trace-element geochemistry is listed for 44 eruption-related samples with intra-laboratory replicate analyses of 19 dacite lava samples. A brief overview of the collection methods and lithology of dome samples is given below as an aid to deciphering the dome sample catalog. This is followed by an explanation of the categories of sample information (column headers) in Tables 1 and 2. A summary of the analytical methods used to obtain the geochemical data in this report introduces the presentation of major- and trace-element geochemistry of 2004?7 Mount St. Helens dome samples in table 3. Intra-laboratory results for the USGS AGV-2 standard are presented (tables 4 and 5), which demonstrate the compatibility of chemical data from different sources.

Characteristics and petrology of the effusive-explosive activity of Colima volcano, in the years 2015-2017

NASA Astrophysics Data System (ADS)

Suarez-Plascencia, C.; Nuñez-Cornu, F. J.; Arreola-Ochoa, L. C.; Suarez, G. B. V.; Carrillo-Gonzalez, D. A.

2017-12-01

The Colima volcano, during the years 2015-2017, presented an important effusive and explosive activity, which began in January 2015 with the growth of a dome that was destroyed by explosions, forming pyroclastic flows reaching distances of up to 2 km by the north and south flanks of the volcano. In May a new dome was extruded, forming three thick lava flows along the northern and southern slopes; the extruded volume was approximately 6 million cubic meters, with a rate in 52 days of 1.3 m3/sec. On July 11 merapi flows were formed it flowed through by the ravines of Montegrande and San Antonio, on the south and southwest flank, reaching distances of 10.4 km. The following days the activity had decreased substantially, leaving a crater of 60 m of depth and 270 m of diameter. In February 2016, a small dome occupied the central part of the main crater, and it was until September that an episode of volcanic tremor began, that was associated with its rapid growth, which in 48 hours filled the crater and formed a lava flow that descended by the south slope. By October 2, 2.3 million m3 of lava were extruded, which caused a deflation of the dome. In October 7, the volcano emitted a great amount of gases and steam of water that formed an acid rain that affected forests and crops of the south and southwest slope, causing losses by 1 million dollars. In November, a series of explosions occurred that destroyed two thirds of the dome. In January 2017, the explosive activity increased and again destroyed the dome. Five events were recorded that reached between 3 km and 4 km of height on the top of the volcano, the dispersion of the ash generally went to the northeast, reaching distances of up to 200 km. Currently the volcano is sustaining reduced seismic and fumarole activity. In 2005, 2015 and 2017, the geochemical analysis of major elements such as SiO2 from the ash emitted by the volcano showed an increase from 54.51% to 60.05% and 60.24%, respectively, which was associated with the increase in volcanic explosions, affecting and causing damages to the economic activities and the localities and settlements in its valleys and piedmont.

Analysis of cortical bone porosity using synchrotron radiation microtomography to evaluate the effects of chemotherapy

NASA Astrophysics Data System (ADS)

Alessio, R.; Nogueira, L. P.; Salata, C.; Mantuano, A.; Almeida, A. P.; Braz, D.; de Almeida, C. E.; Tromba, G.; Barroso, R. C.

2015-11-01

Microporosities play important biologic and mechanical roles on health. One of the side effects caused by some chemotherapy drugs is the induction of amenorrhea, temporary or not, in premenopausal women, with a consequent decrease in estrogen production, which can lead to cortical bone changes. In the present work, the femur diaphysis of rats treated with chemotherapy drugs were evaluated by 3D morphometric parameters using synchrotron radiation microtomography. Control animals were also evaluated for comparison. The 3D tomographic images were obtained at the SYRMEP (SYnchrotron Radiation for MEdical Physics) beamline at the ELETTRA Synchrotron Laboratory in Trieste, Italy. Results showed significant differences in morphometric parameters measured from the 3D images of femur diaphysis of rats.

Morphometric and histological analysis of the lungs of Syrian golden hamsters.

PubMed Central

Kennedy, A R; Desrosiers, A; Terzaghi, M; Little, J B

1978-01-01

Hamster lung morphometry and histology have been studied in an attempt to determine differences between hamster and human lungs which may have relevance for lung carcinogenesis studies. Morphometric measurements were made on fresh lungs, lung casts, and histological sections. Cell type and frequency measurements were determined from frozen, paraffin, 1 micron plastic (glycol methacrylate) and electron microscopic sections. A standard terminology for hamster lung histology is established, and differences between hamster and human lung morphometry and histology are discussed. Images Fig. 2 Fig. 3 Fig. 4 Fig. 8 Fig. 9 Fig. 10 Fig. 11 Fig. 12 Fig. 13 Fig. 14 Fig. 15 Fig. 16 Fig. 17 Fig. 18 Fig. 19 Fig. 20 Fig. 21 Fig. 22 PMID:640957

Redescription of Nemachilichthys rueppelli, a senior synonym of N. shimogensis (Teleostei: Nemacheilidae).

PubMed

Keskar, Ashwini; Kumkar, Pradeep; Katwate, Unmesh; Ali, Anvar; Raghavan, Rajeev; Dahanukar, Neelesh

2015-12-23

The hill-stream loach genus Nemachilichthys, an endemic of the Western Ghats of India, comprises two nominal species, N. rueppelli and N. shimogensis. The validity of the latter has been questioned by several authors. Here we show that there is only a marginal raw mitochondrial genetic distance (0.5% in cytochrome oxidase subunit I and 1.2% in cytochrome b) between topotypic specimens of the two nominal species. Further, although population-level morphometric variations appear in a multivariate morphometric analysis, the two nominal species are morphologically similar, with apparently no significant characters separating them. We therefore consider N. shimogensis to be a junior synonym of N. rueppelli and redescribe the latter, providing further details on population variation and distribution.

Morphometrics of Daucus (Apiaceae): A counterpart to a phylogenomic study

USDA-ARS?s Scientific Manuscript database

Molecular phylogenetics of genome-scale data sets (phylogenomics) often produces phylogenetic trees with unprecedented resolution. A companion phylogenomics analysis of Daucus (carrots) using 94 conserved nuclear orthologs supported many of the traditional species but showed unexpected results that ...

A Nonlinear Theory of Bending and Buckling of Thin Elastic Shallow Spherical Shells

NASA Technical Reports Server (NTRS)

Kaplan, A; Fung, Y C

1954-01-01

The problem of the finite displacement and buckling, of a shallow spherical dome is investigated both theoretically and experimentally. Experimental results seem to indicate that the classical criterion of buckling is applicable to very shallow spherical domes for which the theoretical calculation was made. A transition to energy criterion for higher domes is also indicated.

Heterotopic Prostate at Autopsy- An Unusual Mass at the Dome of the Urinary Bladder

PubMed Central

Munde, Shital; Phadnis, Priyanka

2017-01-01

Heterotopic prostate in the dome of the urinary bladder is extremely rare and difficult to diagnose. It is often mistaken for neoplastic masses and histopathological examination is warranted for diagnosis. We report an autopsy case of an ectopic prostate at the dome of the bladder which mimicked a neoplasm on gross pathology. PMID:29207717

Ferroelectric Fluid Flow Control Valve

NASA Technical Reports Server (NTRS)

Jalink, Antony, Jr. (Inventor); Hellbaum, Richard F. (Inventor); Rohrbach, Wayne W. (Inventor)

1999-01-01

An active valve is controlled and driven by external electrical actuation of a ferroelectric actuator to provide for improved passage of the fluid during certain time periods and to provide positive closure of the valve during other time periods. The valve provides improved passage in the direction of flow and positive closure in the direction against the flow. The actuator is a dome shaped internally prestressed ferroelectric actuator having a curvature, said dome shaped actuator having a rim and an apex. and a dome height measured from a plane through said rim said apex that varies with an electric voltage applied between an inside and an outside surface of said dome shaped actuator.

Autonomous Dome for a Robotic Telescope

NASA Astrophysics Data System (ADS)

Kumar, A.; Sengupta, A.; Ganesh, S.

2016-12-01

The Physical Research Laboratory operates a 50 cm robotic observatory at Mount Abu (Rajsthan, India). This Automated Telescope for Variability Studies (ATVS) makes use of the Remote Telescope System 2 (RTS2) for autonomous operations. The observatory uses a 3.5 m dome from Sirius Observatories. We have developed electronics using Arduino electronic circuit boards with home grown logic and software to control the dome operations. We are in the process of completing the drivers to link our Arduino based dome controller with RTS2. This document is a short description of the various phases of the development and their integration to achieve the required objective.

Structure and evolution of an active resurgent dome evidenced by geophysical investigations: The Yenkahe dome-Yasur volcano system (Siwi caldera, Vanuatu)

NASA Astrophysics Data System (ADS)

Brothelande, E.; Lénat, J.-F.; Chaput, M.; Gailler, L.; Finizola, A.; Dumont, S.; Peltier, A.; Bachèlery, P.; Barde-Cabusson, S.; Byrdina, S.; Menny, P.; Colonge, J.; Douillet, G. A.; Letort, J.; Letourneur, L.; Merle, O.; Di Gangi, F.; Nakedau, D.; Garaebiti, E.

2016-08-01

In this contribution, we focus on one of the most active resurgences on Earth, that of the Yenkahe dome in the Siwi caldera (Tanna Island, Vanuatu), which is associated with the persistently active Yasur volcano. Gravity and magnetic surveys have been carried out over the past few years in the area, as well as electrical methods including electrical resistivity tomography (ERT), time domain electro-magnetics (TDEM) and self-potential (SP). These investigations were completed by thermometry, CO2 soil gas measurements, field observations and sampling. This multi-method approach allows geological structures within the caldera to be identified, as well as associated hydrothermal features. The global structure of the caldera is deduced from gravity data, which shows the caldera rim as a high density structure. Large lava fields, emplaced before and after the onset of resurgence, are evidenced by combined gravity, magnetic and resistivity signals. In the middle of the caldera, the Yenkahe dome apparently results from a combination of volcanic and tectonic events, showing that lava extrusion and resurgence have been operating simultaneously or alternately during the Siwi caldera post-collapse history. There is a clear distinction between the western and eastern parts of the dome. The western part is older and records the growth of an initial volcanic cone and the formation of a small caldera. This small caldera (paleo-Yasur caldera), partially filled with lava flows, is the present-day focus of volcanic activity and associated fluid circulation and alteration. The eastern part of the dome is presumably younger, and is characterized by intense, extensive hydrothermal alteration and activity. Its northern part is covered by lava flow piles and exhibits a shallow hydrothermal zone in ERT. The southern part has hydrothermal alteration and activity extending at least down to the base of the resurgent dome. This part of the dome is built up of low cohesion rock and is thus potentially prone to gravitational landslides. Lastly, while self-potential and temperature data suggest that widespread hydrothermal circulation occurs throughout almost all of the caldera, and possibly beyond, the most active parts of this hydrothermal system are associated with the dome. The presence of this active hydrothermal system is the clearest indicator that these methods can provide of a potential shallow magmatic body underneath the dome.

A novel scheme for abnormal cell detection in Pap smear images

NASA Astrophysics Data System (ADS)

Zhao, Tong; Wachman, Elliot S.; Farkas, Daniel L.

2004-07-01

Finding malignant cells in Pap smear images is a "needle in a haystack"-type problem, tedious, labor-intensive and error-prone. It is therefore desirable to have an automatic screening tool in order that human experts can concentrate on the evaluation of the more difficult cases. Most research on automatic cervical screening tries to extract morphometric and texture features at the cell level, in accordance with the NIH "The Bethesda System" rules. Due to variances in image quality and features, such as brightness, magnification and focus, morphometric and texture analysis is insufficient to provide robust cervical cancer detection. Using a microscopic spectral imaging system, we have produced a set of multispectral Pap smear images with wavelengths from 400 nm to 690 nm, containing both spectral signatures and spatial attributes. We describe a novel scheme that combines spatial information (including texture and morphometric features) with spectral information to significantly improve abnormal cell detection. Three kinds of wavelet features, orthogonal, bi-orthogonal and non-orthogonal, are carefully chosen to optimize recognition performance. Multispectral feature sets are then extracted in the wavelet domain. Using a Back-Propagation Neural Network classifier that greatly decreases the influence of spurious events, we obtain a classification error rate of 5%. Cell morphometric features, such as area and shape, are then used to eliminate most remaining small artifacts. We report initial results from 149 cells from 40 separate image sets, in which only one abnormal cell was missed (TPR = 97.6%) and one normal cell was falsely classified as cancerous (FPR = 1%).

Geometric morphometrics as a tool for improving the comparative study of behavioural postures

NASA Astrophysics Data System (ADS)

Fureix, Carole; Hausberger, Martine; Seneque, Emilie; Morisset, Stéphane; Baylac, Michel; Cornette, Raphaël; Biquand, Véronique; Deleporte, Pierre

2011-07-01

Describing postures has always been a central concern when studying behaviour. However, attempts to compare postures objectively at phylogenetical, populational, inter- or intra-individual levels generally either rely upon a few key elements or remain highly subjective. Here, we propose a novel approach, based on well-established geometric morphometrics, to describe and to analyse postures globally (i.e. considering the animal's body posture in its entirety rather than focusing only on a few salient elements, such as head or tail position). Geometric morphometrics is concerned with describing and comparing variation and changes in the form (size and shape) of organisms using the coordinates of a series of homologous landmarks (i.e. positioned in relation to skeletal or muscular cues that are the same for different species for every variety of form and function and that have derived from a common ancestor, i.e. they have a common evolutionary ancestry, e.g. neck, wings, flipper/hand). We applied this approach to horses, using global postures (1) to characterise behaviours that correspond to different arousal levels, (2) to test potential impact of environmental changes on postures. Our application of geometric morphometrics to horse postures showed that this method can be used to characterise behavioural categories, to evaluate the impact of environmental factors (here human actions) and to compare individuals and groups. Beyond its application to horses, this promising approach could be applied to all questions involving the analysis of postures (evolution of displays, expression of emotions, stress and welfare, behavioural repertoires…) and could lead to a whole new line of research.

Prediction of soil attributes through interpolators in a deglaciated environment with complex landforms

NASA Astrophysics Data System (ADS)

Schünemann, Adriano Luis; Inácio Fernandes Filho, Elpídio; Rocha Francelino, Marcio; Rodrigues Santos, Gérson; Thomazini, Andre; Batista Pereira, Antônio; Gonçalves Reynaud Schaefer, Carlos Ernesto

2017-04-01

The knowledge of environmental variables values, in non-sampled sites from a minimum data set can be accessed through interpolation technique. Kriging and the classifier Random Forest algorithm are examples of predictors with this aim. The objective of this work was to compare methods of soil attributes spatialization in a recent deglaciated environment with complex landforms. Prediction of the selected soil attributes (potassium, calcium and magnesium) from ice-free areas were tested by using morphometric covariables, and geostatistical models without these covariables. For this, 106 soil samples were collected at 0-10 cm depth in Keller Peninsula, King George Island, Maritime Antarctica. Soil chemical analysis was performed by the gravimetric method, determining values of potassium, calcium and magnesium for each sampled point. Digital terrain models (DTMs) were obtained by using Terrestrial Laser Scanner. DTMs were generated from a cloud of points with spatial resolutions of 1, 5, 10, 20 and 30 m. Hence, 40 morphometric covariates were generated. Simple Kriging was performed using the R package software. The same data set coupled with morphometric covariates, was used to predict values of the studied attributes in non-sampled sites through Random Forest interpolator. Little differences were observed on the DTMs generated by Simple kriging and Random Forest interpolators. Also, DTMs with better spatial resolution did not improved the quality of soil attributes prediction. Results revealed that Simple Kriging can be used as interpolator when morphometric covariates are not available, with little impact regarding quality. It is necessary to go further in soil chemical attributes prediction techniques, especially in periglacial areas with complex landforms.

MORFOMETRYKA—A NEW WAY OF ESTABLISHING MORPHOLOGICAL CLASSIFICATION OF GALAXIES

DOE Office of Scientific and Technical Information (OSTI.GOV)

Ferrari, F.; Carvalho, R. R. de; Trevisan, M., E-mail: fabricio@ferrari.pro.br

We present an extended morphometric system to automatically classify galaxies from astronomical images. The new system includes the original and modified versions of the CASGM coefficients (Concentration C{sub 1}, Asymmetry A{sub 3}, and Smoothness S{sub 3}), and the new parameters entropy, H, and spirality σ{sub ψ}. The new parameters A{sub 3}, S{sub 3}, and H are better to discriminate galaxy classes than A{sub 1}, S{sub 1}, and G, respectively. The new parameter σ{sub ψ} captures the amount of non-radial pattern on the image and is almost linearly dependent on T-type. Using a sample of spiral and elliptical galaxies from themore » Galaxy Zoo project as a training set, we employed the Linear Discriminant Analysis (LDA) technique to classify EFIGI (Baillard et al. 4458 galaxies), Nair and Abraham (14,123 galaxies), and SDSS Legacy (779,235 galaxies) samples. The cross-validation test shows that we can achieve an accuracy of more than 90% with our classification scheme. Therefore, we are able to define a plane in the morphometric parameter space that separates the elliptical and spiral classes with a mismatch between classes smaller than 10%. We use the distance to this plane as a morphometric index (M{sub i}) and we show that it follows the human based T-type index very closely. We calculate morphometric index M{sub i} for ∼780k galaxies from SDSS Legacy Survey–DR7. We discuss how M{sub i} correlates with stellar population parameters obtained using the spectra available from SDSS–DR7.« less

Cryovolcanic History of Ceres from Topography

NASA Astrophysics Data System (ADS)

Sori, M. M.; Sizemore, H. G.; Byrne, S.; Bramson, A. M.; Bland, M. T.; Stein, N. T.; Russell, C. T.; Raymond, C. A.

2018-06-01

We use image analysis and flow modeling of domes on Ceres to argue that they are cryovolcanic in origin. Results imply an average cryovolcanic rate of 10000 m^3/yr, orders of magnitude lower than rates of basaltic volcanism on terrestrial planets.

Potassium alum and aluminum sulfate micro-inclusions in polar ice from Dome Fuji, East Antarctica

NASA Astrophysics Data System (ADS)

Ohno, Hiroshi; Iizuka, Yoshinori; Horikawa, Shinichiro; Sakurai, Toshimitsu; Hondoh, Takeo; Motoyama, Hideaki

2014-03-01

Water-soluble trace constituents affect the physicochemical properties of polar ice. Their structural distribution provides important insights into the formation history of ice and inclusions. We report the first finding of KAl(SO4)2·12H2O (potassium alum) and Al2(SO4)3·nH2O (aluminum sulfate) micro-inclusions in the Dome Fuji ice core, East Antartica, using a micro-Raman technique. Eutectic temperatures of these water-soluble species determined using thermal analysis were -0.4 °C for potassium alum and -8.0 °C for aluminum sulfate. Although the formation process of the aluminum-bearing sulfates remains unclear, the occurrence of these salts largely depends on ice depth.

Reconnaissance and deep-drill site selection on Taylor Dome, Antarctica

NASA Technical Reports Server (NTRS)

Grootes, Pieter M.; Waddington, Edwin D.

1993-01-01

Taylor Dome is a small ice dome near the head of Taylor Valley, Southern Victoria Land. The location of the dome, just west of the Transantarctic Mountains, is expected to make the composition of the accumulating snow sensitive to changes in the extent of the Ross Ice Shelf. Thus, it is linked to the discharge of the West Antarctic Ice Sheet but protected against direct influences of glacial-interglacial sea-level rise. The record of past climatic and environmental changes in the ice provides a valuable complement to the radiocarbon-dated proxy record of climate derived from perched deltas, strandlines, and moraines that have been obtained in the nearby Dry Valleys. We carried out a reconnaissance of the Taylor Dome area over the past two field seasons to determine the most favorable location to obtain a deep core to bedrock. A stake network has been established with an 80-km line roughly along the crest of Taylor Dome, and 40-km lines parallel to it and offset by 10 km. These lines have been surveyed 1990/91, and the positions of 9 grid points have been determined with geoceivers. A higher density stake network was placed and surveyed around the most likely drill area in the second year. Ground-based radar soundings in both years provided details on bedrock topography and internal layering of the ice in the drill area. An airborne radar survey in January 1992, completed the radar coverage of the Taylor Dome field area.

A Cascade of Wnt, Eda, and Shh Signaling Is Essential for Touch Dome Merkel Cell Development.

PubMed

Xiao, Ying; Thoresen, Daniel T; Miao, Lingling; Williams, Jonathan S; Wang, Chaochen; Atit, Radhika P; Wong, Sunny Y; Brownell, Isaac

2016-07-01

The Sonic hedgehog (Shh) signaling pathway regulates developmental, homeostatic, and repair processes throughout the body. In the skin, touch domes develop in tandem with primary hair follicles and contain sensory Merkel cells. The developmental signaling requirements for touch dome specification are largely unknown. We found dermal Wnt signaling and subsequent epidermal Eda/Edar signaling promoted Merkel cell morphogenesis by inducing Shh expression in early follicles. Lineage-specific gene deletions revealed intraepithelial Shh signaling was necessary for Merkel cell specification. Additionally, a Shh signaling agonist was sufficient to rescue Merkel cell differentiation in Edar-deficient skin. Moreover, Merkel cells formed in Fgf20 mutant skin where primary hair formation was defective but Shh production was preserved. Although developmentally associated with hair follicles, fate mapping demonstrated Merkel cells primarily originated outside the hair follicle lineage. These findings suggest that touch dome development requires Wnt-dependent mesenchymal signals to establish reciprocal signaling within the developing ectoderm, including Eda signaling to primary hair placodes and ultimately Shh signaling from primary follicles to extrafollicular Merkel cell progenitors. Shh signaling often demonstrates pleiotropic effects within a structure over time. In postnatal skin, Shh is known to regulate the self-renewal, but not the differentiation, of touch dome stem cells. Our findings relate the varied effects of Shh in the touch dome to the ligand source, with locally produced Shh acting as a morphogen essential for lineage specification during development and neural Shh regulating postnatal touch dome stem cell maintenance.

Geological evolution of the Afro-Arabian dome

NASA Astrophysics Data System (ADS)

Almond, D. C.

1986-12-01

The Afro-Arabian dome includes the elevated continental regions enclosing the Red Sea, Gulf of Aden, and the Ethiopian rift system, and extends northwards as far as Jordan. It is more than an order of magnitude larger than other African uplifts. Both the structures and the igneous rocks of the dome appear to be products of the superimposition of two, perhaps three, semi-independent generating systems, initiated at different times but all still active. A strain pattern dominated by NW-trending basins and rifts first became established early in the Cretaceous. By the end of the Oligocene, much of the extensional strain had been taken up along the Red Sea and Gulf of Aden axes, which subsequently developed into an ocean. Palaeogene "trap" volcanism of mildly alkaline to transitional character was related to this horizontal extension rather than to doming. Further west, the East Sahara swell has a history of intermittent alkaline volcanicity which began in the Mesozoic and was independent of magmatism in the Afro-Arabian dome. Volcanicity specifically related to doming began in the Miocene along a N-S zone of uplift extending from Ethiopia to Syria. This elongated swell forms the northern termination of the East African system of domes and rifts, characterized by episodic vertical uplift but very little extension. Superimposition of epeirogenic uplift upon structures formed by horizontal extension took place in the Neogene. Volcanicity related to vertical tectonics is mildly alkaline in character, whereas transitional and tholeiitic magmas are found along the spreading axes.

Mid-Frequency Sonar Interactions with Beaked Whales

DTIC Science & Technology

2011-06-30

Beaked Whale, was not completed. However, several other goals were achieved, including synthesis of a morphometric model of a beaked whale. This and work...induced acoustic fields inside beaked whales and other marine mammals. Another high-level goal was to acquire new high-resolution morphometric and...range 1-10 kHz; collecting high-resolution morphometric data through computerized tomography (CT) scans on marine mammal specimens, and constructing

Characterization and Biomimcry of Avian Nanostructured Tissues

DTIC Science & Technology

2016-01-19

keratin cortex (Maia et al. 2011) at the outer edge of barbs from TEM images. Geometric morphometrics of barb shape Digitized images of the barb thin...morphological measurements (all P > 0.05; Figure 4C; Table S2). Gloss and Barb Geometric Morphometrics Matte and glossy barbs differed significantly in...barbs and lack of multiple, clear anatomically homologous features, traditional landmark based morphometric techniques (Bookstein, 1982) would be

Morphometric differences and fluctuating asymmetry in Melipona subnitida Ducke 1910 (Hymenoptera: Apidae) in different types of housing.

PubMed

Lima, C B S; Nunes, L A; Carvalho, C A L; Ribeiro, M F; Souza, B A; Silva, C S B

2016-01-01

A geometric morphometrics approach was applied to evaluate differences in forewing patterns of the Jandaira bee (Melipona subnitida Ducke). For this, we studied the presence of fluctuating asymmetry (FA) in forewing shape and size of colonies kept in either rational hive boxes or natural tree trunks. We detected significant FA for wing size as well as wing shape independent of the type of housing (rational box or tree trunks), indicating the overall presence of stress during the development of the studied specimens. FA was also significant (p < 0.01) between rational boxes, possibly related to the use of various models of rational boxes used for keeping stingless bees. In addition, a Principal Component Analysis indicated morphometric variation between bee colonies kept in either rational hive boxes or in tree trunks, that may be related to the different origins of the bees: tree trunk colonies were relocated natural colonies while rational box colonies originated from multiplying other colonies. We conclude that adequate measures should be taken to reduce the amount of stress during bee handling by using standard models of rational boxes that cause the least disruption.

Morphometric comparison of Icelandic lava shield volcanoes versus selected Venusian edifices

NASA Technical Reports Server (NTRS)

Garvin, James B.; Williams, Richard S., Jr.

1993-01-01

Shield volcanoes are common landforms on the silicate planets of the inner Solar System, and a wide variety have recently been documented on Venus by means of Magellan observations. In this report, we emphasize our recently completed morphometric analysis of three representative Icelandic lava shields: the classic Skjaldbreidur edifice, the low-reflief Lambahraun feature, and the monogenetic Sandfellshaed shield, as the basis for comparison with representative venusian edifices (greater than 60 km in diameter). Our detailed morphometric measurements of a representative and well-studied set of Icelandic volcanoes permits us to make comparisons with our measurements of a reasonable subset of shield-like edifices on Venus on the basis of Magellan global radar altimetry. Our study has been restricted to venusian features larger than approximately 60 km in basal diameter, on the basis of the minimum intrinsic spatial resolution (8 km) of the Magellan radar altimetry data. Finally, in order to examine the implications of landform scaling from terrestrial simple and composite shields to larger venusian varieties, we have considered the morphometry of the subaerial component of Mauna Loa, a type-locality for a composite shield edifice on Earth.

[Morphometry of pulmonary tissue: From manual to high throughput automation].

PubMed

Sallon, C; Soulet, D; Tremblay, Y

2017-12-01

Weibel's research has shown that any alteration of the pulmonary structure has effects on function. This demonstration required a quantitative analysis of lung structures called morphometry. This is possible thanks to stereology, a set of methods based on principles of geometry and statistics. His work has helped to better understand the morphological harmony of the lung, which is essential for its proper functioning. An imbalance leads to pathophysiology such as chronic obstructive pulmonary disease in adults and bronchopulmonary dysplasia in neonates. It is by studying this imbalance that new therapeutic approaches can be developed. These advances are achievable only through morphometric analytical methods, which are increasingly precise and focused, in particular thanks to the high-throughput automation of these methods. This review makes a comparison between an automated method that we developed in the laboratory and semi-manual methods of morphometric analyzes. The automation of morphometric measurements is a fundamental asset in the study of pulmonary pathophysiology because it is an assurance of robustness, reproducibility and speed. This tool will thus contribute significantly to the acceleration of the race for the development of new drugs. Copyright © 2017 SPLF. Published by Elsevier Masson SAS. All rights reserved.

Light, shadows and surface characteristics: the multispectral Portable Light Dome

NASA Astrophysics Data System (ADS)

Watteeuw, Lieve; Hameeuw, Hendrik; Vandermeulen, Bruno; Van der Perre, Athena; Boschloos, Vanessa; Delvaux, Luc; Proesmans, Marc; Van Bos, Marina; Van Gool, Luc

2016-11-01

A multispectral, multidirectional, portable and dome-shaped acquisition system is developed within the framework of the research projects RICH (KU Leuven) and EES (RMAH, Brussels) in collaboration with the ESAT-VISICS research group (KU Leuven). The multispectral Portable Light Dome (MS PLD) consists of a hemispherical structure, an overhead camera and LEDs emitting in five parts of the electromagnetic spectrum regularly covering the dome's inside surface. With the associated software solution, virtual relighting and enhancements can be applied in a real-time, interactive manner. The system extracts genuine 3D and shading information based on a photometric stereo algorithm. This innovative approach allows for instantaneous alternations between the computations in the infrared, red, green, blue and ultraviolet spectra. The MS PLD system has been tested for research ranging from medieval manuscript illuminations to ancient Egyptian artefacts. Preliminary results have shown that it documents and measures the 3D surface structure of objects, re-visualises underdrawings, faded pigments and inscriptions, and examines the MS results in combination with the actual relief characteristics of the physical object. Newly developed features are reflection maps and histograms, analytic visualisations of the reflection properties of all separate LEDs or selected areas. In its capacity as imaging technology, the system acts as a tool for the analysis of surface materials (e.g. identification of blue pigments, gold and metallic surfaces). Besides offering support in answering questions of attribution and monitoring changes and decay of materials, the PLD also contributes to the identification of materials, all essential factors when making decisions in the conservation protocol.

A genetic analysis of an important hydrophobic interaction at the P22 tailspike protein N-terminal domain.

PubMed

Williams, Jeremie; Venkatesan, Karthikeya; Ayariga, Joseph Atia; Jackson, Doba; Wu, Hongzhuan; Villafane, Robert

2018-06-01

P22 bacteriophage has been studied extensively and has served as a model for many important processes such as in vivo protein folding, protein aggregation and protein-protein interactions. The trimeric tailspike protein (TSP) serves as the receptor-binding protein for the P22 bacteriophage to the bacterial host. The homotrimeric P22 tail consists of three chains of 666aa in which the first 108aa form a trimeric dome-like structure which is called the N-terminal domain (NTD) and is responsible for attachment of the tailspike protein to the rest of the phage particle structure in the phage assembly pathway. Knowledge of this interaction requires information on what amino acids are interacting in the interface and how the NTD structure is maintained. The first 23aa form the "stem peptide" which originates at the dome top and terminates at the dome bottom. It contains a hydrophobic valine patch (V8-V9-V10) located within the dome structure. It is hypothesized that the interaction between the hydrophobic valine patch located on stem peptide and the adjacent polypeptide is critical for the interchain interaction which should be important for the stability of the P22 TSP NTD itself. To test this hypothesis, each amino acid in the valine residues is substituted by an acid, a basic, and a hydrophobic amino acid. The results of such substitutions are presented as well as associated studies. The data strongly suggest that the valine patch is of critical importance in the hydrophobic interaction between stem peptide valine patch and an adjacent chain.

Effusive silicic volcanism in the Paraná Magmatic Province, South Brazil: Evidence for locally-fed lava flows and domes from detailed field work

NASA Astrophysics Data System (ADS)

Polo, L. A.; Janasi, V. A.; Giordano, D.; Lima, E. F.; Cañon-Tapia, E.; Roverato, M.

2018-04-01

Lava flows and dome complexes of silicic composition were identified in the Lower Cretaceous Paraná Magmatic Province (PMP) at Rio Grande do Sul state, southern Brazil. Detailed mapping and image analysis reveals significant volumes of effusive deposits aligned according to main lineaments, likely representing the fissural systems that fed the three Palmas-type silicic units. Different structures indicative of effusive emplacement (lava domes, lobated flows, sheet flows and autobreccias) are very common in the study area, and are probably also more abundant than previously thought in whole PMP silicic magmatism. In fact, effusive deposits seem predominant in the three distinct silicic units identified in the area, since no remnants of pyroclastic components have been identified. The vitreous dacites that make up the upper flows of the basaltic andesite to dacite Barros Cassal sequence are clearly effusive, as indicated by their occurrence as thin sheet flows. The much thicker early Caxias do Sul dacites occur mostly as lava flow lobes and pancake-like, of low to moderate viscosity, and lava domes. The younger, high SiO2 Santa Maria rhyolite unit shows unequivocal examples of effusive deposits at its lower portion, as lobated flows formed by vesicle-rich obsidian. In spite of higher viscosities relative to the previous units ( 106 Pa·s), it is probable that the very low H2O contents 1 wt% of these rhyolite melts, associated with high discharge rates, resulted in an effusive nature in most to this unit.

Development of Semi-Empirical Damping Equation for Baffled Tank with Oblate Spheroidal Dome

NASA Technical Reports Server (NTRS)

Yang, H. Q.; West, Jeff; Brodnick, Jacob; Eberhart, Chad

2016-01-01

Propellant slosh is a potential source of disturbance that can significantly impact the stability of space vehicles. The slosh dynamics are typically represented by a mechanical model of a spring-mass-damper. This mechanical model is then included in the equation of motion of the entire vehicle for Guidance, Navigation and Control analysis. The typical parameters required by the mechanical model include natural frequency of the slosh, slosh mass, slosh mass center location, and the critical damping ratio. A fundamental study has been undertaken at NASA MSFC to understand the fluid damping physics from a ring baffle in the barrel section of a propellant tank. An asymptotic damping equation and CFD blended equation have been derived by NASA MSFC team to complement the popularly used Miles equation at different flow regimes. The new development has found success in providing a nonlinear damping model for the Space Launch System. The purpose of this study is to further extend the semi-empirical damping equations into the oblate spheroidal dome section of the propellant tanks. First, previous experimental data from the spherical baffled tank are collected and analyzed. Several methods of taking the dome curvature effect, including a generalized Miles equation, area projection method, and equalized fill height method, are assessed. CFD simulation is used to shed light on the interaction of vorticity around the baffle with the locally curved wall and liquid-gas interface. The final damping equation will be validated by a recent subscale test with an oblate spheroidal dome conducted at NASA MSFC.

Geomechanical Simulation of Bayou Choctaw Strategic Petroleum Reserve - Model Calibration.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Park, Byoung

2017-02-01

A finite element numerical analysis model has been constructed that consists of a realistic mesh capturing the geometries of Bayou Choctaw (BC) Strategic Petroleum Reserve (SPR) site and multi - mechanism deformation ( M - D ) salt constitutive model using the daily data of actual wellhead pressure and oil - brine interface. The salt creep rate is not uniform in the salt dome, and the creep test data for BC salt is limited. Therefore, the model calibration is necessary to simulate the geomechanical behavior of the salt dome. The cavern volumetric closures of SPR caverns calculated from CAVEMAN aremore » used for the field baseline measurement. The structure factor, A 2 , and transient strain limit factor, K 0 , in the M - D constitutive model are used for the calibration. The A 2 value obtained experimentally from the BC salt and K 0 value of Waste Isolation Pilot Plant (WIPP) salt are used for the baseline values. T o adjust the magnitude of A 2 and K 0 , multiplication factors A2F and K0F are defined, respectively. The A2F and K0F values of the salt dome and salt drawdown skins surrounding each SPR cavern have been determined through a number of back fitting analyses. The cavern volumetric closures calculated from this model correspond to the predictions from CAVEMAN for six SPR caverns. Therefore, this model is able to predict past and future geomechanical behaviors of the salt dome, caverns, caprock , and interbed layers. The geological concerns issued in the BC site will be explained from this model in a follow - up report .« less

Experimental Evaluation of a New Tubular Coronary Stent (V-Flexª).

PubMed

Shun; Wang; Zhou; Verbeken; Ping; Szilard; Yanming; Jianhua; De Scheerder IK

1998-11-01

The safety, efficacy, angiographic and histological effects of a new 316 L, SS seamless stainless steel tubular stent (V-Flexª, Global Therapeutics, Broomfield, Colorado) was evaluated in a porcine coronary and peripheral artery model. Implantation in the right coronary artery was successful in all 16 pigs. Eight pigs were angiographically controlled after 6 weeks and then sacrificed for morphometric analysis. All stented coronary vessels were widely patent at this moment and morphometric analysis showed only a mild fibromuscular neointimal hyperplasia resulting in a neointimal hyperplasia of 1.15 +/- 0.38 mm2. The remaining 8 pigs were controlled and sacrificed at 12 weeks. At that time, all stented vessels were patent and neointimal hyperplasia was 1.22 +/- 0.34 mm2. Comparison with the Palmaz-Schatzª coronary stent (Cordis, Miami, Florida) in a porcine peripheral artery model demonstrated significantly less neointimal hyperplasia at 6 weeks (1.11 +/- 0.73 vs. 2.40 +/- 0.36, p = 0.001) and at 12 weeks (1.53 +/- 0.42 vs. 2.47 +/- 0.63, p = 0.003) for the V-Flex stent. In conclusion, V-Flex coronary stent implantation in a porcine coronary and peripheral arteries results in a high procedural success rate without subacute thrombotic occlusions, despite no further anticoagulation nor antiplatelet therapy. Six and 12 week histopathological and morphometric evaluation demonstrated only a mild fibromuscular neointimal hyperplasia. Comparison with the Palmaz-Schatz coronary stent in a peripheral artery model showed significantly less neointimal hyperplasia in the V-Flex stent.

Ocular linguatuliasis in Ecuador: case report and morphometric study of the larva of Linguatula serrata.

PubMed

Lazo, R F; Hidalgo, E; Lazo, J E; Bermeo, A; Llaguno, M; Murillo, J; Teixeira, V P

1999-03-01

Linguatula serrata is a pentastomid, a cosmopolitan parasite belonging to the Phylum Pentastomida. Humans may act as an intermediate or accidental definitive host of this parasite, manifesting the nasopharyngeal or visceral form, with the latter having been described more frequently. The occurrence of ocular linguatuliasis is extremely rare, but it has been reported in the United States and Israel. The objective of the present paper was to report the first case of ocular linguatuliasis in Ecuador and to extend the morphologic study of L. serrata by morphometric analysis. The patient studied was a 34-year old woman from Guayaquil, Ecuador who complained of ocular pain with conjunctivitis and visual difficulties of two-months duration. Biomicroscopic examination revealed a mobile body in the anterior chamber of the eye. The mobile body was surgically removed. The specimen was fixed in alcohol, cleared using the technique of Loos, stained with acetic carmine, and mounted on balsam between a slide and a coverslip. It was observed with stereoscopic and common light microscopes in combination with an automatic system for image analysis and processing. The morphologic and morphometric characteristics corresponded to the third-instar larval form of L. serrata. To our knowledge, ocular linguatuliasis has not been previously described in South America, with this being the first report for Ecuador and South America. The present study shows that computer morphometry can adequately contribute both to the morphologic study and to the systematic classification of Pentastomids, and L. serrata in particular.

Arabidopsis phenotyping through Geometric Morphometrics.

PubMed

Manacorda, Carlos A; Asurmendi, Sebastian

2018-06-18

Recently, much technical progress was achieved in the field of plant phenotyping. High-throughput platforms and the development of improved algorithms for rosette image segmentation make it now possible to extract shape and size parameters for genetic, physiological and environmental studies on a large scale. The development of low-cost phenotyping platforms and freeware resources make it possible to widely expand phenotypic analysis tools for Arabidopsis. However, objective descriptors of shape parameters that could be used independently of platform and segmentation software used are still lacking and shape descriptions still rely on ad hoc or even sometimes contradictory descriptors, which could make comparisons difficult and perhaps inaccurate. Modern geometric morphometrics is a family of methods in quantitative biology proposed to be the main source of data and analytical tools in the emerging field of phenomics studies. Based on the location of landmarks (corresponding points) over imaged specimens and by combining geometry, multivariate analysis and powerful statistical techniques, these tools offer the possibility to reproducibly and accurately account for shape variations amongst groups and measure them in shape distance units. Here, a particular scheme of landmarks placement on Arabidopsis rosette images is proposed to study shape variation in the case of viral infection processes. Shape differences between controls and infected plants are quantified throughout the infectious process and visualized. Quantitative comparisons between two unrelated ssRNA+ viruses are shown and reproducibility issues are assessed. Combined with the newest automated platforms and plant segmentation procedures, geometric morphometric tools could boost phenotypic features extraction and processing in an objective, reproducible manner.

Origins of Central Pits and Domes on Ceres: Dawn Mapping Constraints and Ganymede Comparisons

NASA Astrophysics Data System (ADS)

Schenk, P.; Hiesinger, H.; Platz, T.; Bowling, T.; Schmidt, B.; Sizemore, H.

2017-09-01

The bright faculae (spots) on Ceres are the most provocative features on this small planetary body and in Occator crater are associated with a prominent fractured dome and pit complex. This feature is analogous to those observed on large icy moon Ganymede and is potentially related to hydrothermal venting of carbonate-rich fluids followed by doming of the pit floor.

Boeing CST-100 Starliner Processing

NASA Image and Video Library

2018-04-26

Boeing’s CST-100 Starliner Orbital Flight Test vehicle will fly the first test flight to space on an uncrewed mission to the International Space Station. Here you see the spacecraft’s upper dome undergoing the final preparations before the upper and lower dome are mated for a pressure test, and then the two domes will move on to be populated with avionics, life support and other critical hardware.

Crowning the Cathedral of Florence: Brunelleschi Builds His Dome. A Unit of Study for Grades 7-10.

ERIC Educational Resources Information Center

Symcox, Linda

This unit focuses on a dramatic moment in the Renaissance from about 1420 when Filippo Brunelleschi single handedly created, defined, and engineered a new architecture by building the great dome of the cathedral of Santa Maria del Fiore in Florence. The dome became the symbol of Florence's grandeur during the Renaissance, and a model for great…

Structural response of nuclear containment shield buildings with unanticipated construction openings

NASA Astrophysics Data System (ADS)

Mac Namara, Sinead Caitriona

As Nuclear Power Plants age many require steam generator replacement. There is a nickel alloy in the steam generator tubes that is susceptible to stress cracking and although these cracks can be sealed the generator becomes uneconomical without 10%-15% of the tubes. The steam generator in a typical nuclear power plant is housed in the containment structure next to the reactor. The equipment hatch is not big enough to facilitate steam generator replacement, thus construction openings in the dome of the containment structure are required. To date the structural consequences of construction openings in the dome have not been examined. This thesis examines the effects of such openings. The prototype concrete dome is made up of a 2 ft thick dome atop 3 ft thick and 170 ft high cylindrical walls (radius 65.5 ft) with a tension ring 15 ft high and 8 ft thick in between. The dome of the building is cast in two layers; a lower 9 inch layer that serves as the formwork for an upper 15 inch layer. The weight of the dome is carried in axial compression along the hoops and meridians of the dome. The first finite element model uses shell elements and considers two limiting load cases; where the two layers act as one, and where the lower layer carries the weight of both. The openings interrupt the hoops and meridians and the weight of the dome must be redistributed around the openings. Without openings, the stresses due to dead load in the structure are very low when compared to the material strength. The impact of the openings is increased compression stresses near the opening. The maximum stresses are approximately four times larger than in the original structure. These results are confirmed by the second model which is made from layers of solid elements. This model shows a significant difference between the compression on the top surface of the dome, in the affected areas, and that on the bottom surface, leading to shear stresses. These shear stresses are largest around the opening but are not large enough to cause delamination.

Modélisation magnétotellurique de la structure géologique profonde de l’unité granulitique de l’In Ouzzal (Hoggar occidental)

NASA Astrophysics Data System (ADS)

Bouzid, Abderrezak; Akacem, Nouredine; Hamoudi, Mohamed; Ouzegane, Khadidja; Abtout, Abdeslam; Kienast, Jean-Robert

2008-11-01

Magnetotelluric modeling of the deep geologic structure of In Ouzzal Granulitic Unit (western Hoggar). The In Ouzzal Granulitic Unit (IOGU) or In Ouzzal Terrane (IOT) is an Archaean block belonging to the Hoggar terrane mosaic. It has been reworked during the Eburnean and is characterized by ultrahigh temperature metamorphism of the structures, which are likely to be old dome and basin structures. The aim of this study, based on a survey of 12 magnetotelluric (MT) soundings, was to characterize the IOGU deep lateral boundaries and to see if it is possible to reconstruct some of these old dome and basin structures after their transformation by metamorphism and deformation. MT data analysis and modeling show that IOGU boundaries extend downwards, at least down to the crust's basement, and may represent suture zones. Inside the terrane, the MT observations do not allow separation between dome and basin structures, because these features are severely stretched. However, the main MT transverse response feature is a deeply rooted great accident, which may be interpreted as a major fault that separates IOGU into two compartments.

NEW Planetarium Programs for Polar Informal Science Education

NASA Astrophysics Data System (ADS)

Sumners, C.; Schloss, A. L.; Reiff, P.

2007-12-01

The modern planetarium is an immersive full-dome theater that can take audiences to Polar Regions in the past, present, or future and can simulate dynamic polar events. With the goal of public engagement and education, we are producing two programs: Night of the Titanic and Ice Worlds. Night of the Titanic uses a famous tragedy to uncover the science that could have saved the ship and the changing conditions in the North Atlantic over the last century. This program also fosters discussion about how humans evaluate data and make critical decisions related to the changing condition of polar ice. Ice Worlds uses comparative planetology themes to present Earth in the context of all ice worlds in the solar system, thus providing a broader perspective for analysis of changes in Earth's Polar Regions. Both programs rely on themes of high public interest to drive attendance and engagement. Both programs are being developed for the large dome theater or planetarium market and for portable Discovery Domes, which can reach urban and rural audiences throughout the world. This paper focuses on techniques for presentation of rigorous science content in a context that will engage the general public as well as school groups over a wide age range.

Santa Maria Volcano, Guatemala

NASA Technical Reports Server (NTRS)

2002-01-01

The eruption of Santa Maria volcano in 1902 was one of the largest eruptions of the 20th century, forming a large crater on the mountain's southwest flank. Since 1922, a lava-dome complex, Santiaguito, has been forming in the 1902 crater. Growth of the dome has produced pyroclastic flows as recently as the 2001-they can be identified in this image. The city of Quezaltenango (approximately 90,000 people in 1989) sits below the 3772 m summit. The volcano is considered dangerous because of the possibility of a dome collapse such as one that occurred in 1929, which killed about 5000 people. A second hazard results from the flow of volcanic debris into rivers south of Santiaguito, which can lead to catastrophic flooding and mud flows. More information on this volcano can be found at web sites maintained by the Smithsonian Institution, Volcano World, and Michigan Tech University. ISS004-ESC-7999 was taken 17 February 2002 from the International Space Station using a digital camera. The image is provided by the Earth Sciences and Image Analysis Laboratory at Johnson Space Center. Searching and viewing of additional images taken by astronauts and cosmonauts is available at the NASA-JSC Gateway to