Early evolution of transversally thermalized partons

NASA Astrophysics Data System (ADS)

Bialas, Andrzej; Chojnacki, Mikolaj; Florkowski, Wojciech

2008-03-01

The idea that the parton system created in relativistic heavy-ion collisions (i) emerges in a state with transverse momenta close to thermodynamic equilibrium and (ii) its evolution at early times is dominated by the 2-dimensional (transverse) hydrodynamics of the ideal fluid is investigated. It is argued that this mechanism may help to solve the problem of early equilibration.

Near-IR spectral evolution of dusty starburst galaxies

NASA Astrophysics Data System (ADS)

Lançon, Ariane; Rocca-Volmerange, Brigitte

1996-11-01

underlying population amounts ≥ 15% even through a 5 arcsec aperture. The model leads to a limit on the direct absorption of Lyman continuum photons by dust situated inside the ionised areas, which in turn, with standard gas-to-dust ratios, translates into small characteristic sizes for the individual coexisting H II regions of the massive starburst area (clusters containing ˜ 102 ionising stars). We show that room is left for IMFs extending to 120 M⊙, rather than truncated at ˜ 60 M⊙ as most conservative studies conclude. High internal velocity dispersions (≥ 20 km s-1) are then needed for the H II regions. An original feature of this work is to base the analysis of near-infrared spectral galaxy observations on a large wavelength range, using models constructed with spectral stellar data observed with the same instrument. However a broader use of this spectral evolution model on other spectral or photometric data samples is possible if the spectral resolution of the model is adapted to observations or if colours are derived from the energy distributions. Catherine J. Cesarsky

Young Binaries and Early Stellar Evolution

NASA Astrophysics Data System (ADS)

Brandner, Wolfgang

1996-07-01

of 14 spatially resolved PMS binaries (separations 0.''6 to 1.prime'7) located in the above mentioned T associations both photometric and spectroscopic information has been analyzed. All binaries (originally unresolved) were identified as PMS stars based on their strong Hα emission and their association with dark clouds. Using the spectral A index, which measures the strength of the CaH band at 697.5nm relative to the nearby continuum as a luminosity class indicator, I showed that the classical T Tauri stars in the sample tend to be close to luminosity class V. Eight out of the 14 pairs could be placed on an H--R diagram. When comparing with theoretical PMS evolutionary tracks the individual components of all pairs appear to be coeval within the observational errors. This result is similar to Hartigan et al. (1994) who found two thirds of the wider pairs with separations from 400 AU to 6000 AU to be coeval. However, unlike Hartigan et al.'s finding for the wider pairs, I find no non-coeval pairs. One of the presumed binaries in our sample (ESO Hα 281) turned out to be a likely chance projection with the ``primary'' showing neither Hα emission nor Li absorption. Finally, using adaptive optics at the ESO 3.6m telescope, diffraction-limited JHK images of the region around the Herbig AeBe star NX Pup were obtained. The close companion (sep. 0.''128) to NX Pup -- originally discovered by HST -- was clearly resolved and its JHK magnitudes were determined. A third object at a separation of 7.''0 from NX Pup was identified as a classical T Tauri star so that NX Pup may in fact form a hierarchical triple system. I discuss the evolutionary status of these stars and derive estimates for their spectral types, luminosities, masses, and ages. My conclusions are that binarity is established very early in stellar evolution, that the orbital parameters of wide binaries (a >= 120AU) remain virtually unchanged during their PMS evolution, and that the components of the wide binaries

Origin and early evolution of photosynthesis

NASA Technical Reports Server (NTRS)

Blankenship, R. E.

1992-01-01

Photosynthesis was well-established on the earth at least 3.5 thousand million years ago, and it is widely believed that these ancient organisms had similar metabolic capabilities to modern cyanobacteria. This requires that development of two photosystems and the oxygen evolution capability occurred very early in the earth's history, and that a presumed phase of evolution involving non-oxygen evolving photosynthetic organisms took place even earlier. The evolutionary relationships of the reaction center complexes found in all the classes of currently existing organisms have been analyzed using sequence analysis and biophysical measurements. The results indicate that all reaction centers fall into two basic groups, those with pheophytin and a pair of quinones as early acceptors, and those with iron sulfur clusters as early acceptors. No simple linear branching evolutionary scheme can account for the distribution patterns of reaction centers in existing photosynthetic organisms, and lateral transfer of genetic information is considered as a likely possibility. Possible scenarios for the development of primitive reaction centers into the heterodimeric protein structures found in existing reaction centers and for the development of organisms with two linked photosystems are presented.

The evolution of early vertebrate photoreceptors.

PubMed

Collin, Shaun P; Davies, Wayne L; Hart, Nathan S; Hunt, David M

2009-10-12

Meeting the challenge of sampling an ancient aquatic landscape by the early vertebrates was crucial to their survival and would establish a retinal bauplan to be used by all subsequent vertebrate descendents. Image-forming eyes were under tremendous selection pressure and the ability to identify suitable prey and detect potential predators was thought to be one of the major drivers of speciation in the Early Cambrian. Based on the fossil record, we know that hagfishes, lampreys, holocephalans, elasmobranchs and lungfishes occupy critical stages in vertebrate evolution, having remained relatively unchanged over hundreds of millions of years. Now using extant representatives of these 'living fossils', we are able to piece together the evolution of vertebrate photoreception. While photoreception in hagfishes appears to be based on light detection and controlling circadian rhythms, rather than image formation, the photoreceptors of lampreys fall into five distinct classes and represent a critical stage in the dichotomy of rods and cones. At least four types of retinal cones sample the visual environment in lampreys mediating photopic (and potentially colour) vision, a sampling strategy retained by lungfishes, some modern teleosts, reptiles and birds. Trichromacy is retained in cartilaginous fishes (at least in batoids and holocephalans), where it is predicted that true scotopic (dim light) vision evolved in the common ancestor of all living gnathostomes. The capacity to discriminate colour and balance the tradeoff between resolution and sensitivity in the early vertebrates was an important driver of eye evolution, where many of the ocular features evolved were retained as vertebrates progressed on to land.

The early thermal evolution of Mars

NASA Astrophysics Data System (ADS)

Bhatia, G. K.; Sahijpal, S.

2016-01-01

Hf-W isotopic systematics of Martian meteorites have provided evidence for the early accretion and rapid core formation of Mars. We present the results of numerical simulations performed to study the early thermal evolution and planetary scale differentiation of Mars. The simulations are confined to the initial 50 Myr (Ma) of the formation of solar system. The accretion energy produced during the growth of Mars and the decay energy due to the short-lived radio-nuclides 26Al, 60Fe, and the long-lived nuclides, 40K, 235U, 238U, and 232Th are incorporated as the heat sources for the thermal evolution of Mars. During the core-mantle differentiation of Mars, the molten metallic blobs were numerically moved using Stoke's law toward the center with descent velocity that depends on the local acceleration due to gravity. Apart from the accretion and the radioactive heat energies, the gravitational energy produced during the differentiation of Mars and the associated heat transfer is also parametrically incorporated in the present work to make an assessment of its contribution to the early thermal evolution of Mars. We conclude that the accretion energy alone cannot produce widespread melting and differentiation of Mars even with an efficient consumption of the accretion energy. This makes 26Al the prime source for the heating and planetary scale differentiation of Mars. We demonstrate a rapid accretion and core-mantle differentiation of Mars within the initial ~1.5 Myr. This is consistent with the chronological records of Martian meteorites.

Temporal evolution of ion spectral structures during a geomagnetic storm: Observations and modeling

NASA Astrophysics Data System (ADS)

Ferradas, C.; Zhang, J.; Spence, H. E.; Kistler, L. M.; Larsen, B.; Reeves, G. D.; Skoug, R. M.; Funsten, H. O.

2016-12-01

During the last decades several missions have recorded the presence of dynamic spectral features of energetic ions in the inner magnetosphere. We present a case study of the temporal evolution of H+, He+, and O+ spectral structures throughout the geomagnetic storm of 2 October 2013. We use data from the Helium, Oxygen, Proton, and Electron (HOPE) mass spectrometer onboard Van Allen Probe A to analyze the spectral structures in the energy range of 1- 50 keV. We find that the characteristics of the ion structures follow a cyclic pattern, the observed features changing dramatically as the storm starts and then returning to its initial pre-storm state. Quiet, pre-storm times are characterized by multiple and often complex flux structures at narrow energy bands. During the storm main phase, the observed features become simple, with no nose structures or only one nose structure present in the energy-time spectrograms. As the inner magnetosphere recovers from the storm, more complex structures appear once again. Additionally, the heavy ion spectral features are generally more complex than the H+ features, with multiple noses being observed more often in the heavy ion spectra. We use a model of ion drift and losses due to charge exchange to understand the formation of the spectral features and their species dependence.

Early Precambrian crustal evolution of south India

NASA Technical Reports Server (NTRS)

Srinivasan, R.

1986-01-01

The Early Precambrian sequence in Karnataka, South India provides evidences for a distinct trend of evolution which differs from trends exhibited in many other Early Precambrian regions of the world. The supracrustal rock associations preserved in greenstone belts and as inclusions in gneisses and granulites suggest the evolution of the terrain from a stable to a mobile regime. The stable regime is represented by (1) layered ultramafic-mafic complexes, (2) orthoquartzite-basalt-rhyodacite-iron formation, and (30 ortho-quartzite-carbonate-Mn-Fe formation. The mobile regime, which can be shown on sedimentological grounds to have succeeded the stable regime, witnessed the accumulation of a greywacke-pillow basalt-dacite-rhyolite-iron formation association. Detrital sediments of the stable zone accumulated dominantly in fluvial environment and the associated volcanics are ubaerial. The volcanics of the stable regime are tholeiites derived from a zirconium and LREE-enriched sources. The greywackes of the mobile regime are turbidities, and the volcanic rocks possess continental margin (island-arc or back-arc) affinity; they show a LREE depleted to slightly LREE-enriched pattern. The evolution from a stable to a mobile regime is in contrast to the trend seen in most other regions of the world, where an early dominantly volcanic association of a mobile regime gives way upward in the sequence to sediments characteristic of a stable regime.

Nonthermal X-ray Spectral Flattening toward Low Energies in Early Impulsive Flares

NASA Technical Reports Server (NTRS)

Holman, Gordon D.

2007-01-01

The determination of the low-energy cutoff to nonthermal electron distributions is critical to the calculation of the nonthermal energy in solar flares. The most direct evidence for low-energy cutoffs is flattening of the power-law, nontherma1 X-ray spectra at low energies. However, because of the plasma preheating often seen in flares, the thermal emissions at low energies may hide such spectral flattening of the nonthermal component. We select a category of flares, which we call "early impulsive flares", in which the > 25 keV hard X-ray (HXR) flux increase is delayed by less than 30 s after the flux increase at lower energies. Thus, the plasma preheating in these flares is minimal, so the nonthermal spectrum can be determined to lower energies than in flares with significant preheating. Out of a sample of 33 early impulsive flares observed by the Ramaty High Energy Solar Spectroscopy Imager (RHESSI), 9 showed spectral flattening toward low energies. In these events, the break energy of the double power-law fit to the HXR spectra lies in the range of 10-50 keV, significantly lower than the value we have seen for other flares that do not show such early impulsive emissions. In particular, it correlates with the HXR flux. After correcting the spatially-integrated spectra for albedo from isotropically emitted X-rays and using RHESSI imaging spectroscopy to exclude the extended albedo halo, we find that albedo associated with isotropic or nearly isotropic electrons can only account for the spectral flattening in 3 flares near Sun center. The spectral flattening in the remaining 6 flares is found to be consistent with the existence of a low-energy cutoff in the electron spectrum, falling in the range of 15-50 keV, which also correlates with the HXR flux.

Early evolution without a tree of life.

PubMed

Martin, William F

2011-06-30

Life is a chemical reaction. Three major transitions in early evolution are considered without recourse to a tree of life. The origin of prokaryotes required a steady supply of energy and electrons, probably in the form of molecular hydrogen stemming from serpentinization. Microbial genome evolution is not a treelike process because of lateral gene transfer and the endosymbiotic origins of organelles. The lack of true intermediates in the prokaryote-to-eukaryote transition has a bioenergetic cause.

MEVTV study: Early tectonic evolution of Mars: Crustal dichotomy to Valles Marineris

NASA Technical Reports Server (NTRS)

Frey, Herbert V.; Schultz, Richard A.

1990-01-01

Several fundamental problems were addressed in the early impact, tectonic, and volcanic evolution of the martian lithosphere: (1) origin and evolution of the fundamental crustal dichotomy, including development of the highland/lowland transition zone; (2) growth and evolution of the Valles Marineris; and (3) nature and role of major resurfacing events in early martian history. The results in these areas are briefly summarized.

Visible Near-infrared Spectral Evolution of Irradiated Mixed Ices and Application to Kuiper Belt Objects and Jupiter Trojans

NASA Astrophysics Data System (ADS)

Poston, Michael J.; Mahjoub, Ahmed; Ehlmann, Bethany L.; Blacksberg, Jordana; Brown, Michael E.; Carlson, Robert W.; Eiler, John M.; Hand, Kevin P.; Hodyss, Robert; Wong, Ian

2018-04-01

Understanding the history of Kuiper Belt Objects and Jupiter Trojans will help to constrain models of solar system formation and dynamical evolution. Laboratory simulations of a possible thermal and irradiation history of these bodies were conducted on ice mixtures while monitoring their spectral properties. These simulations tested the hypothesis that the presence or absence of sulfur explains the two distinct visible near-infrared spectral groups observed in each population and that Trojans and KBOs share a common formation location. Mixed ices consisting of water, methanol, and ammonia, in mixtures both with and without hydrogen sulfide, were deposited and irradiated with 10 keV electrons. Deposition and initial irradiation were performed at 50 K to simulate formation at 20 au in the early solar system, then heated to Trojan-like temperatures and irradiated further. Finally, irradiation was concluded and resulting samples were observed during heating to room temperature. Results indicated that the presence of sulfur resulted in steeper spectral slopes. Heating through the 140–200 K range decreased the slopes and total reflectance for both mixtures. In addition, absorption features at 410, 620, and 900 nm appeared under irradiation, but only in the H2S-containing mixture. These features were lost with heating once irradiation was concluded. While the results reported here are consistent with the hypothesis, additional work is needed to address uncertainties and to simulate conditions not included in the present work.

HAZMAT. I. The evolution of far-UV and near-UV emission from early M stars

DOE Office of Scientific and Technical Information (OSTI.GOV)

Shkolnik, Evgenya L.; Barman, Travis S., E-mail: shkolnik@lowell.edu, E-mail: barman@lpl.arizona.edu

2014-10-01

The spectral energy distribution, variability, and evolution of the high-energy radiation from an M dwarf planet host is crucial in understanding the planet's atmospheric evolution and habitability and in interpreting the planet's spectrum. The star's extreme-UV (EUV), far-UV (FUV), and near-UV (NUV) emission can chemically modify, ionize, and erode the atmosphere over time. This makes determining the lifetime exposure of such planets to stellar UV radiation critical for both the evolution of a planet's atmosphere and our potential to characterize it. Using the early M star members of nearby young moving groups, which sample critical ages in planet formation andmore » evolution, we measure the evolution of the GALEX NUV and FUV flux as a function of age. The median UV flux remains at a 'saturated' level for a few hundred million years, analogous to that observed for X-ray emission. By the age of the Hyades Cluster (650 Myr), we measure a drop in UV flux by a factor of 2-3 followed by a steep drop from old (several Gyrs) field stars. This decline in activity beyond 300 Myr follows roughly t {sup –1}. Despite this clear evolution, there remains a wide range, of 1-2 orders of magnitude, in observed emission levels at every age. These UV data supply the much-needed constraints to M dwarf upper-atmosphere models, which will provide empirically motivated EUV predictions and more accurate age-dependent UV spectra as inputs to planetary photochemical models.« less

The nucleosynthetic origins and chemical evolution of phosphorus in the early universe

NASA Astrophysics Data System (ADS)

Frebel, Anna

2013-10-01

Relatively little is known about the chemical evolution of the element phosphorus, despite its relatively large abundance in the Sun and its importance for biological life. The goal of this archive proposal is to establish the chemical evolution trend of phosphorus, extending our knowledge from solar metallicity to stars with less than 1/1000th the solar metallicity.Previous studies have used weak near-infrared P I lines to establish phosphorus abundance trends from -1.0 < [Fe/H] < 0. We have identified a strong P I doublet in the UV at 2136 Angstroms, which is present in the spectra of 22 stars available in the HST archives. Our study will {1} improve on the limited observations of the abundance trend at high metallicity and extend it to metallicities lower by 2 dex and {2} determine whether [P/Fe] flattens out towards lower metallicities {like the alpha-elements Mg, Si, Ca, and Ti} or whether it continues to increase {like Co and Zn}. Our results will provide the first tight constraints on the nucleosynthesis of phosphorus and its production sites in the early Universe.We request one semester of funding to support a graduate student to lead the spectral analysis work, one month of summer salary, and miscellaneous travel and publication costs.

Spatiotemporal Evolution of Hanle and Zeeman Synthetic Polarization in a Chromospheric Spectral Line

DOE Office of Scientific and Technical Information (OSTI.GOV)

Carlin, E. S.; Bianda, M., E-mail: escarlin@irsol.es

Due to the quick evolution of the solar chromosphere, its magnetic field cannot be inferred reliably without accounting for the temporal variations of its polarized light. This has been broadly overlooked in the modeling and interpretation of the polarization, due to technical problems (e.g., lack of temporal resolution or of time-dependent MHD solar models) and/or because many polarization measurements can apparently be explained without dynamics. Here, we show that the temporal evolution is critical for explaining the spectral-line scattering polarization because of its sensitivity to rapidly varying physical quantities and the possibility of signal cancellations and attenuation during extended timemore » integration. For studying the combined effect of time-varying magnetic fields and kinematics, we solved the 1.5D non-LTE problem of the second kind in time-dependent 3D R-MHD solar models and synthesized the Hanle and Zeeman polarization in forward scattering for the chromospheric λ 4227 line. We find that the quiet-Sun polarization amplitudes depend on the periodicity and spectral coherence of the signal enhancements produced by kinematics, but that substantially larger linear polarization signals should exist all over the solar disk for short integration times. The spectral morphology of the polarization is discussed as a combination of Hanle, Zeeman, partial redistribution and dynamic effects. We give physical references for observations by degrading and characterizing our slit time series in different spatiotemporal resolutions. The implications of our results for the interpretation of the second solar spectrum and for the investigation of the solar atmospheric heatings are discussed.« less

The Origin and Early Evolution of Membrane Proteins

NASA Technical Reports Server (NTRS)

Pohorille, Andrew; Schweighofter, Karl; Wilson, Michael A.

2006-01-01

The origin and early evolution of membrane proteins, and in particular ion channels, are considered from the point of view that the transmembrane segments of membrane proteins are structurally quite simple and do not require specific sequences to fold. We argue that the transport of solute species, especially ions, required an early evolution of efficient transport mechanisms, and that the emergence of simple ion channels was protobiologically plausible. We also argue that, despite their simple structure, such channels could possess properties that, at the first sight, appear to require markedly larger complexity. These properties can be subtly modulated by local modifications to the sequence rather than global changes in molecular architecture. In order to address the evolution and development of ion channels, we focus on identifying those protein domains that are commonly associated with ion channel proteins and are conserved throughout the three main domains of life (Eukarya, Prokarya, and Archaea). We discuss the potassium-sodium-calcium superfamily of voltage-gated ion channels, mechanosensitive channels, porins, and ABC-transporters and argue that these families of membrane channels have sufficiently universal architectures that they can readily adapt to the diverse functional demands arising during evolution.

Spectral evolution with doping of an antiferromagnetic Mott state

NASA Astrophysics Data System (ADS)

Wu, Huan-Kuang; Lee, Ting-Kuo

2017-01-01

Since the discovery of half-filled cuprate to be a Mott insulator, the excitation spectra above the chemical potential for the unoccupied states has attracted much research attention. There were many theoretical works using different numerical techniques to study this problem, but many have reached different conclusions. One of the reasons is the lack of very detailed high-resolution experimental results for the theories to be compared with. Recently, the scanning tunneling spectroscopy [P. Cai et al., Nat. Phys. 12, 1047 (2016), 10.1038/nphys3840; C. Ye et al., Nat. Commun. 4, 1365 (2013), 10.1038/ncomms2369] on lightly doped Mott insulator with an antiferromagnetic order found the presence of in-gap states with energy of order half an eV above the chemical potential. The measured spectral properties with doping are not quite consistent with earlier theoretical works. Although the experiment has disorder and localization effect, but for the energy scale we will study here, a model without disorder is sufficed to illustrate the underlying physics. We perform a diagonalization method on top of the variational Monte Carlo calculation to study the evolution of antiferromagnetic Mott state with doped hole concentration in the Hubbard model. Our results found in-gap states that behave similarly with ones reported by STS. These in-gap states acquire a substantial amount of dynamical spectral weight transferred from the upper Hubbard band. The in-gap states move toward chemical potential with increasing spectral weight as doping increases. Our result also provides information about the energy scale of these in-gap states in relation with the Coulomb coupling strength U .

SPECTRAL EVOLUTION OF ANOMALOUS COSMIC RAYS AT VOYAGER 1 BEYOND THE TERMINATION SHOCK

DOE Office of Scientific and Technical Information (OSTI.GOV)

Senanayake, U. K.; Florinski, V.; Cummings, A. C.

When the Voyager 1 spacecraft crossed the termination shock (TS) on 2004 December 16, the energy spectra of anomalous cosmic rays (ACRs) could not have been produced by steady-state diffusive shock acceleration. However, over the next few years, in the declining phase of the solar cycle, the spectra began to evolve into the expected power-law profile. Observations at the shock led to a broad range of alternative theories for ACR acceleration. In spite of that, in this work we show that the observations could be explained by assuming ACRs are accelerated at the TS. In this paper, we propose thatmore » the solar cycle had an important effect on the unrolling of the spectra in the heliosheath. To investigate the spectral evolution of ACRs, a magnetohydrodynamic background model with stationary solar-wind inner boundary conditions was used to model the transport of helium and oxygen ions. We used a backward-in-time stochastic integration technique where phase-space trajectories are integrated until the so-called “injection energy” is reached. Our simulation results were compared with Voyager 1 observations using three different diffusion models. It is shown that the spectral evolution of ACRs in the heliosheath at Voyager 1 could be explained by an increase in the source strength and an enhancement in diffusion as a result of a decrease of the turbulent correlation length in the declining phase of the solar cycle. At the same time, drift effects seem to have had a smaller effect on the evolution of the spectra.« less

Early evolution without a tree of life

PubMed Central

2011-01-01

Life is a chemical reaction. Three major transitions in early evolution are considered without recourse to a tree of life. The origin of prokaryotes required a steady supply of energy and electrons, probably in the form of molecular hydrogen stemming from serpentinization. Microbial genome evolution is not a treelike process because of lateral gene transfer and the endosymbiotic origins of organelles. The lack of true intermediates in the prokaryote-to-eukaryote transition has a bioenergetic cause. This article was reviewed by Dan Graur, W. Ford Doolittle, Eugene V. Koonin and Christophe Malaterre. PMID:21714942

What Can Spectral Properties of Martian Surface and Snc Can Tell Us about the Martian Crust Composition and Evolution

NASA Astrophysics Data System (ADS)

Ody, A.; Poulet, F.; Baratoux, D.; Quantin, C.; Bibring, J. P.

2014-12-01

While the study of Martian meteorites can provide detailed information about the crust and mantle composition and evolution, remote-sensing observations, through the merging of compositional and geological data, allow highlighting planetary-scale trends of the Martian crustal evolution [1,2]. Recently, the analysis of the global distribution of mafic minerals [3] has put new constraints on the Martian crust formation and evolution. One of the major results is a past global event of olivine-bearing fissural volcanism that has filled craters and low depressions in the southern highlands and a large part of the Northern plains during the late Noachian/early Hesperian. Petrologic models show that this sudden increase of the olivine content at the Noachian-Hesperian boundary could be the result of a rapid thickening of the lithosphere at the end of the Noachian era [4]. A recent study based on the OMEGA/MEx data has shown that the spectral properties of the shergottites are similar to those of some Noachian and Hesperian terrains [5]. To contrary, the Nakhla spectral properties are very different from those of the observable surface and could be representative of Amazonian terrains buried under dust. These results are best explained with an old age of the shergottites [6] and with the present understanding of the evolution of magma composition at a planetary scale [7]. On the other hand, if shergottites are young [8], the similarities between the shergottites and ancient terrains implies that exceptional conditions of melting with respect to the ambient mantle (e.g., hot spots or water-rich mantle source) were responsible for the formation of these samples [9]. References: [1] McSween et al., 2009, Science, 324. [2] Ehlmann & Edwards 2014, AREPS, vol. 42. [3] Ody et al., 2013, JGR,117,E00J14. [4] Ody et al., 2014, 8th Inter. Conf. on Mars,#1190. [5] Ody et al., 2013, 44th LPSC, #1719. [6] Bouvier et al., 2009, EPSL, 280. [7] Baratoux et al., 2013, JGR, 118. [8] Nyquist

A Bivariate Chebyshev Spectral Collocation Quasilinearization Method for Nonlinear Evolution Parabolic Equations

PubMed Central

Motsa, S. S.; Magagula, V. M.; Sibanda, P.

2014-01-01

This paper presents a new method for solving higher order nonlinear evolution partial differential equations (NPDEs). The method combines quasilinearisation, the Chebyshev spectral collocation method, and bivariate Lagrange interpolation. In this paper, we use the method to solve several nonlinear evolution equations, such as the modified KdV-Burgers equation, highly nonlinear modified KdV equation, Fisher's equation, Burgers-Fisher equation, Burgers-Huxley equation, and the Fitzhugh-Nagumo equation. The results are compared with known exact analytical solutions from literature to confirm accuracy, convergence, and effectiveness of the method. There is congruence between the numerical results and the exact solutions to a high order of accuracy. Tables were generated to present the order of accuracy of the method; convergence graphs to verify convergence of the method and error graphs are presented to show the excellent agreement between the results from this study and the known results from literature. PMID:25254252

A bivariate Chebyshev spectral collocation quasilinearization method for nonlinear evolution parabolic equations.

PubMed

Motsa, S S; Magagula, V M; Sibanda, P

2014-01-01

This paper presents a new method for solving higher order nonlinear evolution partial differential equations (NPDEs). The method combines quasilinearisation, the Chebyshev spectral collocation method, and bivariate Lagrange interpolation. In this paper, we use the method to solve several nonlinear evolution equations, such as the modified KdV-Burgers equation, highly nonlinear modified KdV equation, Fisher's equation, Burgers-Fisher equation, Burgers-Huxley equation, and the Fitzhugh-Nagumo equation. The results are compared with known exact analytical solutions from literature to confirm accuracy, convergence, and effectiveness of the method. There is congruence between the numerical results and the exact solutions to a high order of accuracy. Tables were generated to present the order of accuracy of the method; convergence graphs to verify convergence of the method and error graphs are presented to show the excellent agreement between the results from this study and the known results from literature.

Connections Between Jet Formation and Multiwavelength Spectral Evolution in Black Hole Transients

NASA Technical Reports Server (NTRS)

Kakemci, Emrah; Chun, Yoon-Young; Dincer, Tolga; Buxton, Michelle; Tomsick, John A.; Corbel, Stephane; Kaaret, Philip

2011-01-01

Multiwavelength observations are the key to understand conditions of jet formation in Galactic black hole transient (GBHT) systems. By studying radio and optical-infrared evolution of such systems during outburst decays, the compact jet formation can be traced. Comparing this with X-ray spectral and timing evolution we can obtain physical and geometrical conditions for jet formation, and study the contribution of jets to X-ray emission. In this work, first X-ray evolution - jet relation for XTE J1752-223 will be discussed. This source had very good coverage in X-rays, optical, infrared and radio. A long exposure with INTEGRAL also allowed us to study gamma-ray behavior after the jet turns on. We will also show results from the analysis of data from GX 339-4 in the hard state with SUZAKU at low flux levels. The fits to iron line fluorescence emission show that the inner disk radius increases by a factor of greater than 27 with respect to radii in bright states. This result, along with other disk radius measurements in the hard state will be discussed within the context of conditions for launching and sustaining jets.

A Long Decay of X-Ray Flux and Spectral Evolution in the Supersoft Active Galactic Nucleus GSN 069

NASA Astrophysics Data System (ADS)

Shu, X. W.; Wang, S. S.; Dou, L. M.; Jiang, N.; Wang, J. X.; Wang, T. G.

2018-04-01

GSN 069 is an optically identified very low-mass active galactic nuclei (AGN) that shows supersoft X-ray emission. The source is known to exhibit a huge X-ray outburst, with flux increased by more than a factor of ∼240 compared to the quiescence state. We report its long-term evolution in the X-ray flux and spectral variations over a timescale of ∼decade, using both new and archival X-ray observations from the XMM-Newton and Swift. The new Swift observations detected the source in its lowest level of X-ray activity since the outburst, a factor of ∼4 lower in the 0.2–2 keV flux than that obtained with the XMM-Newton observations nearly eight years ago. Combining with the historical X-ray measurements, we find that the X-ray flux is decreasing slowly. There seemed to be spectral softening associated with the drop of X-ray flux. In addition, we find evidence for the presence of a weak, variable, hard X-ray component, in addition to the dominant thermal blackbody emission reported before. The long decay of X-ray flux and spectral evolution, as well as the supersoft X-ray spectra, suggest that the source could be a tidal disruption event (TDE), though a highly variable AGN cannot be fully ruled out. Further continued X-ray monitoring would be required to test the TDE interpretation, by better determining the flux evolution in the decay phase.

A new hypothesis of dinosaur relationships and early dinosaur evolution.

PubMed

Baron, Matthew G; Norman, David B; Barrett, Paul M

2017-03-22

For 130 years, dinosaurs have been divided into two distinct clades-Ornithischia and Saurischia. Here we present a hypothesis for the phylogenetic relationships of the major dinosaurian groups that challenges the current consensus concerning early dinosaur evolution and highlights problematic aspects of current cladistic definitions. Our study has found a sister-group relationship between Ornithischia and Theropoda (united in the new clade Ornithoscelida), with Sauropodomorpha and Herrerasauridae (as the redefined Saurischia) forming its monophyletic outgroup. This new tree topology requires redefinition and rediagnosis of Dinosauria and the subsidiary dinosaurian clades. In addition, it forces re-evaluations of early dinosaur cladogenesis and character evolution, suggests that hypercarnivory was acquired independently in herrerasaurids and theropods, and offers an explanation for many of the anatomical features previously regarded as notable convergences between theropods and early ornithischians.

Early School-Leaving in Spain: Evolution, Intensity and Determinants

ERIC Educational Resources Information Center

Fernandez-Macias, Enrique; Anton, Jose-Ignacio; Brana, Francisco-Javier; De Bustillo, Rafael Munoz

2013-01-01

Spain has one of the highest levels of early school leaving and educational failure of the European Union. The purpose of this paper is to analyse the anatomy of early school leaving in Spain and its characteristics. In order to do so, in the first part we discuss the measurement problems related with this concept and the evolution of drop-out…

Spectral evolution of active galactic nuclei: A unified description of the X-ray and gamma

NASA Technical Reports Server (NTRS)

Leiter, D.; Boldt, E.

1982-01-01

A model for spectral evolution is presented whereby active galactic nuclei (AGN) of the type observed individually emerge from an earlier stage at z approx = 4 in which they are the thermal X-ray sources responsible for most of the cosmic X-ray background (CXB). The conjecture is pursued that these precursor objects are initially supermassive Schwarzschild black holes with accretion disks radiating near the Eddington luminosity limit. It is noted that after approx. 10 to the 8th power years these central black holes are spun-up to a canonical Kerr equilibrium state (A/M = 0.998; Thorne 1974) and shown how they then can lead to spectral evolution involving non-thermal emission extending to gamma rays, at the expense of reduced thermal disk radiation. That major portion of the CXB remaining after the contribution of usual AGN are considered, while a superposition of AGN sources at z 1 can account for the gamma ray background. Extensive X-ray measurements carried out with the HEAO 1 and 2 missions as well as gamma ray and optical data are shown to compare favorably with principal features of this model.

ACCRETION FLOW DYNAMICS OF MAXI J1659-152 FROM THE SPECTRAL EVOLUTION STUDY OF ITS 2010 OUTBURST USING THE TCAF SOLUTION

DOE Office of Scientific and Technical Information (OSTI.GOV)

Debnath, Dipak; Molla, Aslam Ali; Chakrabarti, Sandip K.

2015-04-20

Transient black hole candidates are interesting objects to study in X-rays as these sources show rapid evolutions in their spectral and temporal properties. In this paper, we study the spectral properties of the Galactic transient X-ray binary MAXI J1659-152 during its very first outburst after discovery with the archival data of RXTE Proportional Counter Array instruments. We make a detailed study of the evolution of accretion flow dynamics during its 2010 outburst through spectral analysis using the Chakrabarti–Titarchuk two-component advective flow (TCAF) model as an additive table model in XSPEC. Accretion flow parameters (Keplerian disk and sub-Keplerian halo rates, shockmore » location, and shock strength) are extracted from our spectral fits with TCAF. We studied variations of these fit parameters during the entire outburst as it passed through three spectral classes: hard, hard-intermediate, and soft-intermediate. We compared our TCAF fitted results with standard combined disk blackbody (DBB) and power-law (PL) model fitted results and found that variations of disk rate with DBB flux and halo rate with PL flux are generally similar in nature. There appears to be an absence of the soft state, unlike what is seen in other similar sources.« less

Hubble Space Telescope studies of low-redshift Type Ia supernovae: evolution with redshift and ultraviolet spectral trends

NASA Astrophysics Data System (ADS)

Maguire, K.; Sullivan, M.; Ellis, R. S.; Nugent, P. E.; Howell, D. A.; Gal-Yam, A.; Cooke, J.; Mazzali, P.; Pan, Y.-C.; Dilday, B.; Thomas, R. C.; Arcavi, I.; Ben-Ami, S.; Bersier, D.; Bianco, F. B.; Fulton, B. J.; Hook, I.; Horesh, A.; Hsiao, E.; James, P. A.; Podsiadlowski, P.; Walker, E. S.; Yaron, O.; Kasliwal, M. M.; Laher, R. R.; Law, N. M.; Ofek, E. O.; Poznanski, D.; Surace, J.

2012-11-01

We present an analysis of the maximum light, near-ultraviolet (NUV; 2900 < λ < 5500 Å) spectra of 32 low-redshift (0.001 < z < 0.08) Type Ia supernovae (SNe Ia), obtained with the Hubble Space Telescope (HST) using the Space Telescope Imaging Spectrograph. We combine this spectroscopic sample with high-quality gri light curves obtained with robotic telescopes to measure SN Ia photometric parameters, such as stretch (light-curve width), optical colour and brightness (Hubble residual). By comparing our new data to a comparable sample of SNe Ia at intermediate redshift (0.4 < z < 0.9), we detect modest spectral evolution (3σ), in the sense that our mean low-redshift NUV spectrum has a depressed flux compared to its intermediate-redshift counterpart. We also see a strongly increased dispersion about the mean with decreasing wavelength, confirming the results of earlier surveys. We show that these trends are consistent with changes in metallicity as predicted by contemporary SN Ia spectral models. We also examine the properties of various NUV spectral diagnostics in the individual SN spectra. We find a general correlation between SN stretch and the velocity (or position) of many NUV spectral features. In particular, we observe that higher stretch SNe have larger Ca II H&K velocities, which also correlate with host galaxy stellar mass. This latter trend is probably driven by the well-established correlation between stretch and host galaxy stellar mass. We find no significant trends between UV spectral features and optical colour. Mean spectra constructed according to whether the SN has a positive or negative Hubble residual show very little difference at NUV wavelengths, indicating that the NUV evolution and variation we identify does not directly correlate with Hubble diagram residuals. Our work confirms and strengthens earlier conclusions regarding the complex behaviour of SNe Ia in the NUV spectral region, but suggests the correlations we find are more useful in

On the origin and early evolution of biological catalysis and other studies on chemical evolution

NASA Technical Reports Server (NTRS)

Oro, J.; Lazcano, A.

1991-01-01

One of the lines of research in molecular evolution which we have developed for the past three years is related to the experimental and theoretical study of the origin and early evolution of biological catalysis. In an attempt to understand the nature of the first peptidic catalysts and coenzymes, we have achieved the non-enzymatic synthesis of the coenzymes ADPG, GDPG, and CDP-ethanolamine, under conditions considered to have been prevalent on the primitive Earth. We have also accomplished the prebiotic synthesis of histidine, as well as histidyl-histidine, and we have measured the enhancing effects of this catalytic dipeptide on the dephosphorylation of deoxyribonucleotide monophosphates, the hydrolysis of oligo A, and the oligomerization 2', 3' cAMP. We reviewed and further developed the hypothesis that RNA preceded double stranded DNA molecules as a reservoir of cellular genetic information. This led us to undertake the study of extant RNA polymerases in an attempt to discover vestigial sequences preserved from early Archean times. In addition, we continued our studies of on the chemical evolution of organic compounds in the solar system and beyond.

Temporal Evolution of Ion Spectral Structures During a Geomagnetic Storm: Observations and Modeling

NASA Astrophysics Data System (ADS)

Ferradas, C. P.; Zhang, J.-C.; Spence, H. E.; Kistler, L. M.; Larsen, B. A.; Reeves, G. D.; Skoug, R. M.; Funsten, H. O.

2018-01-01

Using the Van Allen Probes/Helium, Oxygen, Proton, and Electron mass spectrometer, we perform a case study of the temporal evolution of ion spectral structures observed in the energy range of 1 to 50 keV throughout the geomagnetic storm of 2 October 2013. The ion spectral features are observed near the inner edge of the plasma sheet and are signatures of fresh transport from the plasma sheet into the inner magnetosphere. We find that the characteristics of the ion structures are determined by the intensity of the convection electric field. Prior to the beginning of the storm, the plasma sheet inner edge exhibits narrow nose spectral structures that vary little in energy across L values. Ion access to the inner magnetosphere during these times is limited to the nose energy bands. As convection is enhanced and large amounts of plasma are injected from the plasma sheet during the main phase of the storm, ion access occurs at a wide energy range, as no nose structures are observed. As the magnetosphere recovers from the storm, single noses and then multiple noses are observed once again. We use a model of ion drift and losses due to charge exchange to simulate the ion spectra and gain insight into the main observed features.

Archean komatiite volcanism controlled by the evolution of early continents.

PubMed

Mole, David R; Fiorentini, Marco L; Thebaud, Nicolas; Cassidy, Kevin F; McCuaig, T Campbell; Kirkland, Christopher L; Romano, Sandra S; Doublier, Michael P; Belousova, Elena A; Barnes, Stephen J; Miller, John

2014-07-15

The generation and evolution of Earth's continental crust has played a fundamental role in the development of the planet. Its formation modified the composition of the mantle, contributed to the establishment of the atmosphere, and led to the creation of ecological niches important for early life. Here we show that in the Archean, the formation and stabilization of continents also controlled the location, geochemistry, and volcanology of the hottest preserved lavas on Earth: komatiites. These magmas typically represent 50-30% partial melting of the mantle and subsequently record important information on the thermal and chemical evolution of the Archean-Proterozoic Earth. As a result, it is vital to constrain and understand the processes that govern their localization and emplacement. Here, we combined Lu-Hf isotopes and U-Pb geochronology to map the four-dimensional evolution of the Yilgarn Craton, Western Australia, and reveal the progressive development of an Archean microcontinent. Our results show that in the early Earth, relatively small crustal blocks, analogous to modern microplates, progressively amalgamated to form larger continental masses, and eventually the first cratons. This cratonization process drove the hottest and most voluminous komatiite eruptions to the edge of established continental blocks. The dynamic evolution of the early continents thus directly influenced the addition of deep mantle material to the Archean crust, oceans, and atmosphere, while also providing a fundamental control on the distribution of major magmatic ore deposits.

Archean komatiite volcanism controlled by the evolution of early continents

PubMed Central

Mole, David R.; Fiorentini, Marco L.; Thebaud, Nicolas; Cassidy, Kevin F.; McCuaig, T. Campbell; Kirkland, Christopher L.; Romano, Sandra S.; Doublier, Michael P.; Belousova, Elena A.; Barnes, Stephen J.; Miller, John

2014-01-01

The generation and evolution of Earth’s continental crust has played a fundamental role in the development of the planet. Its formation modified the composition of the mantle, contributed to the establishment of the atmosphere, and led to the creation of ecological niches important for early life. Here we show that in the Archean, the formation and stabilization of continents also controlled the location, geochemistry, and volcanology of the hottest preserved lavas on Earth: komatiites. These magmas typically represent 50–30% partial melting of the mantle and subsequently record important information on the thermal and chemical evolution of the Archean–Proterozoic Earth. As a result, it is vital to constrain and understand the processes that govern their localization and emplacement. Here, we combined Lu-Hf isotopes and U-Pb geochronology to map the four-dimensional evolution of the Yilgarn Craton, Western Australia, and reveal the progressive development of an Archean microcontinent. Our results show that in the early Earth, relatively small crustal blocks, analogous to modern microplates, progressively amalgamated to form larger continental masses, and eventually the first cratons. This cratonization process drove the hottest and most voluminous komatiite eruptions to the edge of established continental blocks. The dynamic evolution of the early continents thus directly influenced the addition of deep mantle material to the Archean crust, oceans, and atmosphere, while also providing a fundamental control on the distribution of major magmatic ore deposits. PMID:24958873

Swift captures the spectrally evolving prompt emission of GRB070616

NASA Astrophysics Data System (ADS)

Starling, R. L. C.; O'Brien, P. T.; Willingale, R.; Page, K. L.; Osborne, J. P.; de Pasquale, M.; Nakagawa, Y. E.; Kuin, N. P. M.; Onda, K.; Norris, J. P.; Ukwatta, T. N.; Kodaka, N.; Burrows, D. N.; Kennea, J. A.; Page, M. J.; Perri, M.; Markwardt, C. B.

2008-02-01

The origins of gamma-ray burst (GRB) prompt emission are currently not well understood and in this context long, well-observed events are particularly important to study. We present the case of GRB070616, analysing the exceptionally long-duration multipeaked prompt emission, and later afterglow, captured by all the instruments on-board Swift and by Suzaku Wide-Band All-Sky Monitor (WAM). The high-energy light curve remained generally flat for several hundred seconds before going into a steep decline. Spectral evolution from hard to soft is clearly taking place throughout the prompt emission, beginning at 285s after the trigger and extending to 1200s. We track the movement of the spectral peak energy, whilst observing a softening of the low-energy spectral slope. The steep decline in flux may be caused by a combination of this strong spectral evolution and the curvature effect. We investigate origins for the spectral evolution, ruling out a superposition of two power laws and considering instead an additional component dominant during the late prompt emission. We also discuss origins for the early optical emission and the physics of the afterglow. The case of GRB070616 clearly demonstrates that both broad-band coverage and good time resolution are crucial to pin down the origins of the complex prompt emission in GRBs. This paper is dedicated to the memory of Dr Francesca Tamburelli who died during its production. Francesca played a fundamental role within the team which is in charge of the development of the Swift X-Ray Telescope (XRT) data analysis software at the Italian Space Agency's Science Data Centre in Frascati. She is sadly missed. E-mail: rlcs1@star.le.ac.uk

Fossil evidence for the early ant evolution

NASA Astrophysics Data System (ADS)

Perrichot, Vincent; Lacau, Sébastien; Néraudeau, Didier; Nel, André

2008-02-01

Ants are one of the most studied insects in the world; and the literature devoted to their origin and evolution, systematics, ecology, or interactions with plants, fungi and other organisms is prolific. However, no consensus yet exists on the age estimate of the first Formicidae or on the origin of their eusociality. We review the fossil and biogeographical record of all known Cretaceous ants. We discuss the possible origin of the Formicidae with emphasis on the most primitive subfamily Sphecomyrminae according to its distribution and the Early Cretaceous palaeogeography. And we review the evidence of true castes and eusociality of the early ants regarding their morphological features and their manner of preservation in amber. The mid-Cretaceous amber forest from south-western France where some of the oldest known ants lived, corresponded to a moist tropical forest close to the shore with a dominance of gymnosperm trees but where angiosperms (flowering plants) were already diversified. This palaeoenvironmental reconstruction supports an initial radiation of ants in forest ground litter coincident with the rise of angiosperms, as recently proposed as an ecological explanation for their origin and successful evolution.

Multiplicity in Early Stellar Evolution

NASA Astrophysics Data System (ADS)

Reipurth, B.; Clarke, C. J.; Boss, A. P.; Goodwin, S. P.; Rodríguez, L. F.; Stassun, K. G.; Tokovinin, A.; Zinnecker, H.

Observations from optical to centimeter wavelengths have demonstrated that multiple systems of two or more bodies is the norm at all stellar evolutionary stages. Multiple systems are widely agreed to result from the collapse and fragmentation of cloud cores, despite the inhibiting influence of magnetic fields. Surveys of class 0 protostars with millimeter interferometers have revealed a very high multiplicity frequency of about 2/3, even though there are observational difficulties in resolving close protobinaries, thus supporting the possibility that all stars could be born in multiple systems. Near-infrared adaptive optics observations of class I protostars show a lower binary frequency relative to the class 0 phase, a declining trend that continues through the class II/III stages to the field population. This loss of companions is a natural consequence of dynamical interplay in small multiple systems, leading to ejection of members. We discuss observational consequences of this dynamical evolution, and its influence on circumstellar disks, and we review the evolution of circumbinary disks and their role in defining binary mass ratios. Special attention is paid to eclipsing PMS binaries, which allow for observational tests of evolutionary models of early stellar evolution. Many stars are born in clusters and small groups, and we discuss how interactions in dense stellar environments can significantly alter the distribution of binary separations through dissolution of wider binaries. The binaries and multiples we find in the field are the survivors of these internal and external destructive processes, and we provide a detailed overview of the multiplicity statistics of the field, which form a boundary condition for all models of binary evolution. Finally, we discuss various formation mechanisms for massive binaries, and the properties of massive trapezia.

Early evolution of Tubulogenerina during the Paleogene of Europe

USGS Publications Warehouse

Gibson, T.G.; Barbin, V.; Poignant, A.; Sztrakos, K.

1991-01-01

The early evolution of Tubulogenerina took place in Europe where eight species occur in lower Eocene to uppermost Oligocene or lower Miocene strata. Species diversity within Tubulogenerina dropped significantly in the early Oligocne; only a single species persisted from the late Eocene, and it became extinct before the end of the early Oligocene. Morphologic changes during the European phylogeny of Tubulogenerina include (1) the development of costate and more complex tubulopore ornamentation, and (2) the change from a single elongated apertural slit with a single toothplate to multiple apertures and toothplates. Three new Tubulogenerina species are described. -from Authors

Spectral properties of the temporal evolution of brain network structure.

PubMed

Wang, Rong; Zhang, Zhen-Zhen; Ma, Jun; Yang, Yong; Lin, Pan; Wu, Ying

2015-12-01

The temporal evolution properties of the brain network are crucial for complex brain processes. In this paper, we investigate the differences in the dynamic brain network during resting and visual stimulation states in a task-positive subnetwork, task-negative subnetwork, and whole-brain network. The dynamic brain network is first constructed from human functional magnetic resonance imaging data based on the sliding window method, and then the eigenvalues corresponding to the network are calculated. We use eigenvalue analysis to analyze the global properties of eigenvalues and the random matrix theory (RMT) method to measure the local properties. For global properties, the shifting of the eigenvalue distribution and the decrease in the largest eigenvalue are linked to visual stimulation in all networks. For local properties, the short-range correlation in eigenvalues as measured by the nearest neighbor spacing distribution is not always sensitive to visual stimulation. However, the long-range correlation in eigenvalues as evaluated by spectral rigidity and number variance not only predicts the universal behavior of the dynamic brain network but also suggests non-consistent changes in different networks. These results demonstrate that the dynamic brain network is more random for the task-positive subnetwork and whole-brain network under visual stimulation but is more regular for the task-negative subnetwork. Our findings provide deeper insight into the importance of spectral properties in the functional brain network, especially the incomparable role of RMT in revealing the intrinsic properties of complex systems.

Spectral properties of the temporal evolution of brain network structure

NASA Astrophysics Data System (ADS)

Wang, Rong; Zhang, Zhen-Zhen; Ma, Jun; Yang, Yong; Lin, Pan; Wu, Ying

2015-12-01

The temporal evolution properties of the brain network are crucial for complex brain processes. In this paper, we investigate the differences in the dynamic brain network during resting and visual stimulation states in a task-positive subnetwork, task-negative subnetwork, and whole-brain network. The dynamic brain network is first constructed from human functional magnetic resonance imaging data based on the sliding window method, and then the eigenvalues corresponding to the network are calculated. We use eigenvalue analysis to analyze the global properties of eigenvalues and the random matrix theory (RMT) method to measure the local properties. For global properties, the shifting of the eigenvalue distribution and the decrease in the largest eigenvalue are linked to visual stimulation in all networks. For local properties, the short-range correlation in eigenvalues as measured by the nearest neighbor spacing distribution is not always sensitive to visual stimulation. However, the long-range correlation in eigenvalues as evaluated by spectral rigidity and number variance not only predicts the universal behavior of the dynamic brain network but also suggests non-consistent changes in different networks. These results demonstrate that the dynamic brain network is more random for the task-positive subnetwork and whole-brain network under visual stimulation but is more regular for the task-negative subnetwork. Our findings provide deeper insight into the importance of spectral properties in the functional brain network, especially the incomparable role of RMT in revealing the intrinsic properties of complex systems.

Temporal evolution of ion spectral structures during a geomagnetic storm: Observations and modeling

DOE Office of Scientific and Technical Information (OSTI.GOV)

Ferradas Alva, Cristian Pablo; Zhang, J.-C.; Spence, H. E.

Using the Van Allen Probes/Helium, Oxygen, Proton, and Electron (HOPE) mass spectrometer, we perform a case study of the temporal evolution of ion spectral structures observed in the energy range of 1- ~50 keV throughout the geomagnetic storm of 2 October 2013. The ion spectral features are observed near the inner edge of the plasma sheet and are signatures of fresh transport from the plasma sheet into the inner magnetosphere. We find that the characteristics of the ion structures are determined by the intensity of the convection electric field. Prior to the beginning of the storm, the plasma sheet innermore » edge exhibits narrow nose spectral structures that vary little in energy across L values. Ion access to the inner magnetosphere during these times is limited to the nose energy bands. As convection is enhanced and large amounts of plasma are injected from the plasma sheet during the main phase of the storm, ion access occurs at a wide energy range, as no nose structures are observed. Here, as the magnetosphere recovers from the storm, single noses and then multiple noses are observed once again. Lastly, we use a model of ion drift and losses due to charge exchange to simulate the ion spectra and gain insight into the main observed features.« less

Temporal evolution of ion spectral structures during a geomagnetic storm: Observations and modeling

DOE PAGES

Ferradas Alva, Cristian Pablo; Zhang, J.-C.; Spence, H. E.; ...

2017-12-13

Using the Van Allen Probes/Helium, Oxygen, Proton, and Electron (HOPE) mass spectrometer, we perform a case study of the temporal evolution of ion spectral structures observed in the energy range of 1- ~50 keV throughout the geomagnetic storm of 2 October 2013. The ion spectral features are observed near the inner edge of the plasma sheet and are signatures of fresh transport from the plasma sheet into the inner magnetosphere. We find that the characteristics of the ion structures are determined by the intensity of the convection electric field. Prior to the beginning of the storm, the plasma sheet innermore » edge exhibits narrow nose spectral structures that vary little in energy across L values. Ion access to the inner magnetosphere during these times is limited to the nose energy bands. As convection is enhanced and large amounts of plasma are injected from the plasma sheet during the main phase of the storm, ion access occurs at a wide energy range, as no nose structures are observed. Here, as the magnetosphere recovers from the storm, single noses and then multiple noses are observed once again. Lastly, we use a model of ion drift and losses due to charge exchange to simulate the ion spectra and gain insight into the main observed features.« less

S cones: Evolution, retinal distribution, development, and spectral sensitivity.

PubMed

Hunt, David M; Peichl, Leo

2014-03-01

S cones expressing the short wavelength-sensitive type 1 (SWS1) class of visual pigment generally form only a minority type of cone photoreceptor within the vertebrate duplex retina. Hence, their primary role is in color vision, not in high acuity vision. In mammals, S cones may be present as a constant fraction of the cones across the retina, may be restricted to certain regions of the retina or may form a gradient across the retina, and in some species, there is coexpression of SWS1 and the long wavelength-sensitive (LWS) class of pigment in many cones. During retinal development, SWS1 opsin expression generally precedes that of LWS opsin, and evidence from genetic studies indicates that the S cone pathway may be the default pathway for cone development. With the notable exception of the cartilaginous fishes, where S cones appear to be absent, they are present in representative species from all other vertebrate classes. S cone loss is not, however, uncommon; they are absent from most aquatic mammals and from some but not all nocturnal terrestrial species. The peak spectral sensitivity of S cones depends on the spectral characteristics of the pigment present. Evidence from the study of agnathans and teleost fishes indicates that the ancestral vertebrate SWS1 pigment was ultraviolet (UV) sensitive with a peak around 360 nm, but this has shifted into the violet region of the spectrum (>380 nm) on many separate occasions during vertebrate evolution. In all cases, the shift was generated by just one or a few replacements in tuning-relevant residues. Only in the avian lineage has tuning moved in the opposite direction, with the reinvention of UV-sensitive pigments.

Open Listening: Creative Evolution in Early Childhood Settings

ERIC Educational Resources Information Center

Davies, Bronwyn

2011-01-01

This article sketches out a philosophy and practice of open listening, linking open listening to Bergson's (1998) concept of creative evolution. I draw on examples of small children at play from a variety of sources, including Reggio-Emilia-inspired preschools in Sweden. The article offers a challenge to early childhood educators to listen and to…

Vestibular evidence for the evolution of aquatic behaviour in early cetaceans.

PubMed

Spoor, F; Bajpai, S; Hussain, S T; Kumar, K; Thewissen, J G M

2002-05-09

Early cetaceans evolved from terrestrial quadrupeds to obligate swimmers, a change that is traditionally studied by functional analysis of the postcranial skeleton. Here we assess the evolution of cetacean locomotor behaviour from an independent perspective by looking at the semicircular canal system, one of the main sense organs involved in neural control of locomotion. Extant cetaceans are found to be unique in that their canal arc size, corrected for body mass, is approximately three times smaller than in other mammals. This reduces the sensitivity of the canal system, most plausibly to match the fast body rotations that characterize cetacean behaviour. Eocene fossils show that the new sensory regime, incompatible with terrestrial competence, developed quickly and early in cetacean evolution, as soon as the taxa are associated with marine environments. Dedicated agile swimming of cetaceans thus appeared to have originated as a rapid and fundamental shift in locomotion rather than as the gradual transition suggested by postcranial evidence. We hypothesize that the unparalleled modification of the semicircular canal system represented a key 'point of no return' event in early cetacean evolution, leading to full independence from life on land.

Early dynamical evolution of substructured stellar clusters

NASA Astrophysics Data System (ADS)

Dorval, Julien; Boily, Christian

2015-08-01

It is now widely accepted that stellar clusters form with a high level of substructure (Kuhn et al. 2014, Bate 2009), inherited from the molecular cloud and the star formation process. Evidence from observations and simulations also indicate the stars in such young clusters form a subvirial system (Kirk et al. 2007, Maschberger et al. 2010). The subsequent dynamical evolution can cause important mass loss, ejecting a large part of the birth population in the field. It can also imprint the stellar population and still be inferred from observations of evolved clusters. Nbody simulations allow a better understanding of these early twists and turns, given realistic initial conditions. Nowadays, substructured, clumpy young clusters are usually obtained through pseudo-fractal growth (Goodwin et al. 2004) and velocity inheritance. Such models are visually realistics and are very useful, they are however somewhat artificial in their velocity distribution. I introduce a new way to create clumpy initial conditions through a "Hubble expansion" which naturally produces self consistent clumps, velocity-wise. A velocity distribution analysis shows the new method produces realistic models, consistent with the dynamical state of the newly created cores in hydrodynamic simulation of cluster formation (Klessen & Burkert 2000). I use these initial conditions to investigate the dynamical evolution of young subvirial clusters, up to 80000 stars. I find an overall soft evolution, with hierarchical merging leading to a high level of mass segregation. I investigate the influence of the mass function on the fate of the cluster, specifically on the amount of mass loss induced by the early violent relaxation. Using a new binary detection algorithm, I also find a strong processing of the native binary population.

Human evolution. Evolution of early Homo: an integrated biological perspective.

PubMed

Antón, Susan C; Potts, Richard; Aiello, Leslie C

2014-07-04

Integration of evidence over the past decade has revised understandings about the major adaptations underlying the origin and early evolution of the genus Homo. Many features associated with Homo sapiens, including our large linear bodies, elongated hind limbs, large energy-expensive brains, reduced sexual dimorphism, increased carnivory, and unique life history traits, were once thought to have evolved near the origin of the genus in response to heightened aridity and open habitats in Africa. However, recent analyses of fossil, archaeological, and environmental data indicate that such traits did not arise as a single package. Instead, some arose substantially earlier and some later than previously thought. From ~2.5 to 1.5 million years ago, three lineages of early Homo evolved in a context of habitat instability and fragmentation on seasonal, intergenerational, and evolutionary time scales. These contexts gave a selective advantage to traits, such as dietary flexibility and larger body size, that facilitated survival in shifting environments. Copyright © 2014, American Association for the Advancement of Science.

Enhanced transcription and translation in clay hydrogel and implications for early life evolution

PubMed Central

Yang, Dayong; Peng, Songming; Hartman, Mark R.; Gupton-Campolongo, Tiffany; Rice, Edward J.; Chang, Anna Kathryn; Gu, Zi; Lu, G. Q. (Max); Luo, Dan

2013-01-01

In most contemporary life forms, the confinement of cell membranes provides localized concentration and protection for biomolecules, leading to efficient biochemical reactions. Similarly, confinement may have also played an important role for prebiotic compartmentalization in early life evolution when the cell membrane had not yet formed. It remains an open question how biochemical reactions developed without the confinement of cell membranes. Here we mimic the confinement function of cells by creating a hydrogel made from geological clay minerals, which provides an efficient confinement environment for biomolecules. We also show that nucleic acids were concentrated in the clay hydrogel and were protected against nuclease, and that transcription and translation reactions were consistently enhanced. Taken together, our results support the importance of localized concentration and protection of biomolecules in early life evolution, and also implicate a clay hydrogel environment for biochemical reactions during early life evolution. PMID:24196527

MEVTV Workshop on Early Tectonic and Volcanic Evolution of Mars

NASA Technical Reports Server (NTRS)

Frey, H. (Editor)

1988-01-01

Although not ignored, the problems of the early tectonic and volcanic evolution of Mars have generally received less attention than those later in the evolution of the planet. Specifically, much attention was devoted to the evolution of the Tharsis region of Mars and to the planet itself at the time following the establishment of this major tectonic and volcanic province. By contrast, little attention was directed at fundamental questions, such as the conditions that led to the development of Tharsis and the cause of the basic fundamental dichotomy of the Martian crust. It was to address these and related questions of the earliest evolution of Mars that a workshop was organized under the auspices of the Mars: Evolution of Volcanism, Tectonism, and Volatiles (MEVTV) Program. Four sessions were held: crustal dichotomy; crustal differentiation/volcanism; Tharsis, Elysium, and Valles Marineris; and ridges and fault tectonics.

Spectral decomposition of asteroid Itokawa based on principal component analysis

NASA Astrophysics Data System (ADS)

Koga, Sumire C.; Sugita, Seiji; Kamata, Shunichi; Ishiguro, Masateru; Hiroi, Takahiro; Tatsumi, Eri; Sasaki, Sho

2018-01-01

The heliocentric stratification of asteroid spectral types may hold important information on the early evolution of the Solar System. Asteroid spectral taxonomy is based largely on principal component analysis. However, how the surface properties of asteroids, such as the composition and age, are projected in the principal-component (PC) space is not understood well. We decompose multi-band disk-resolved visible spectra of the Itokawa surface with principal component analysis (PCA) in comparison with main-belt asteroids. The obtained distribution of Itokawa spectra projected in the PC space of main-belt asteroids follows a linear trend linking the Q-type and S-type regions and is consistent with the results of space-weathering experiments on ordinary chondrites and olivine, suggesting that this trend may be a space-weathering-induced spectral evolution track for S-type asteroids. Comparison with space-weathering experiments also yield a short average surface age (< a few million years) for Itokawa, consistent with the cosmic-ray-exposure time of returned samples from Itokawa. The Itokawa PC score distribution exhibits asymmetry along the evolution track, strongly suggesting that space weathering has begun saturated on this young asteroid. The freshest spectrum found on Itokawa exhibits a clear sign for space weathering, indicating again that space weathering occurs very rapidly on this body. We also conducted PCA on Itokawa spectra alone and compared the results with space-weathering experiments. The obtained results indicate that the first principal component of Itokawa surface spectra is consistent with spectral change due to space weathering and that the spatial variation in the degree of space weathering is very large (a factor of three in surface age), which would strongly suggest the presence of strong regional/local resurfacing process(es) on this small asteroid.

Early dynamical evolution of young substructured clusters

NASA Astrophysics Data System (ADS)

Dorval, Julien; Boily, Christian

2017-03-01

Stellar clusters form with a high level of substructure, inherited from the molecular cloud and the star formation process. Evidence from observations and simulations also indicate the stars in such young clusters form a subvirial system. The subsequent dynamical evolution can cause important mass loss, ejecting a large part of the birth population in the field. It can also imprint the stellar population and still be inferred from observations of evolved clusters. Nbody simulations allow a better understanding of these early twists and turns, given realistic initial conditions. Nowadays, substructured, clumpy young clusters are usually obtained through pseudo-fractal growth and velocity inheritance. We introduce a new way to create clumpy initial conditions through a ''Hubble expansion'' which naturally produces self consistent clumps, velocity-wise. In depth analysis of the resulting clumps shows consistency with hydrodynamical simulations of young star clusters. We use these initial conditions to investigate the dynamical evolution of young subvirial clusters. We find the collapse to be soft, with hierarchical merging leading to a high level of mass segregation. The subsequent evolution is less pronounced than the equilibrium achieved from a cold collapse formation scenario.

Early evolution of the extraordinary Nova Delphini 2013 (V339 Del)

NASA Astrophysics Data System (ADS)

Skopal, A.; Drechsel, H.; Tarasova, T.; Kato, T.; Fujii, M.; Teyssier, F.; Garde, O.; Guarro, J.; Edlin, J.; Buil, C.; Antao, D.; Terry, J.-N.; Lemoult, T.; Charbonnel, S.; Bohlsen, T.; Favaro, A.; Graham, K.

2014-09-01

Aims: We determine the temporal evolution of the luminosity (LWD), radius (RWD) and effective temperature (Teff) of the white dwarf (WD) pseudophotosphere of V339 Del from its discovery to around day 40. Another main objective was studying the ionization structure of the ejecta. Methods: These aims were achieved by modelling the optical/near-IR spectral energy distribution (SED) using low-resolution spectroscopy (3500-9200 Å), UBVRCIC and JHKLM photometry. Important insights in the physical conditions of the ejecta were gained from an analysis of the evolution of the Hα and Raman-scattered 6825 Å O vi line using medium-resolution spectroscopy (R ~ 10 000). Results: During the fireball stage (Aug. 14.8-19.9, 2013), Teff was in the range of 6000-12 000 K, RWD was expanding non-uniformly in time from ~66 to ~300 (d/ 3 kpc) R⊙, and LWD was super-Eddington, but not constant. Its maximum of ~9 × 1038 (d/ 3 kpc)2 erg s-1 occurred around Aug. 16.0, at the maximum of Teff, half a day before the visual maximum. After the fireball stage, a large emission measure of 1.0-2.0 × 1062 (d/ 3 kpc)2 cm-3 constrained the lower limit of LWD to be well above the super-Eddington value. The mass of the ionized region was a few × 10-4 M⊙, and the mass-loss rate was decreasing from ~5.7 (Aug. 22) to ~0.71 × 10-4 M⊙ yr-1 (Sept. 20). The evolution of the Hα line and mainly the transient emergence of the Raman-scattered O vi 1032 Å line suggested a biconical ionization structure of the ejecta with a disk-like H i region persisting around the WD until its total ionization, around day 40. On Sept. 20 (day 35), the model SED indicated a dust emission component in the spectrum. The dust was located beyond the H i zone, where it was shielded from the hard, ≳105 K, radiation of the burning WD at that time. Conclusions: Our extensive spectroscopic observations of the classical nova V339 Del allowed us to map its evolution from the very early phase after its explosion. It is evident

Pulse Shape Evolution, HER X-1

NASA Technical Reports Server (NTRS)

VanParadijs, Johannes A.

1998-01-01

This study focuses on the pulse shape evolution and spectral properties of the X-ray binary Her X-1 with regard to the well known 35-day cycle of Her X-1. A follow-up set of RXTE observations has been conducted in RXTE AO-2 phase and the two observation sets are being analyzed together. We presented results of early analysis of pulse shape evolution in "Proceedings of the Fourth Compton Symposium." More advanced analysis was presented at the HEAD meeting in November, 1997 in Estes Park, Colorado. A related study of the 35-day cycle using RXTE/ASM data, which laid out the overall picture within which the more detailed PCA observations could be placed has also been conducted. The results of this study have been published in The Astrophysical Journal, vol. 510, 974. A pair of papers on the detailed pulse evolution and the spectral/color evolution are currently being prepared for publication. Some of the significant results of this study have been a confirmation of the detailed pulse profile changes at the end of the Main High state in Her X-1 first observed by GINGA, observations of the pulse evolution in several Short High states which agree with the pulse evolution pattern predicted using a disk occultation model in the PhD Thesis of Scott 1993, observation of a systematic lengthening of the eclipse egress during the Main High state of the 35-day phase and observation of a new type of extended eclipse ingress during which pulsations cease to observed during the Short High state.

Conference on Early Mars: Geologic and Hydrologic Evolution, Physical and Chemical Environments, and the Implications for Life

NASA Technical Reports Server (NTRS)

Clifford, S. M. (Editor); Treiman, A. H. (Editor); Newsom, H. E. (Editor); Farmer, J. D. (Editor)

1997-01-01

Topics considered include: Geology alteration and life in an extreme environment; developing a chemical code to identify magnetic biominerals; effect of impacts on early Martin geologic evolution; spectroscopic identification of minerals in Hematite-bearing soils and sediments; exopaleontology and the search for a Fossil record on Mars; geochemical evolution of the crust of Mars; geological evolution of the early earth;solar-wind-induced erosion of the Mars atmosphere. Also included geological evolution of the crust of Mars.

Modeling the early evolution of Vesta

NASA Astrophysics Data System (ADS)

Weisfeiler, Marie; Turcotte, Donald L.; Kellogg, Louise H.

2017-05-01

The early evolution of the asteroid Vesta has been extensively studied because of the availability of relevant data, especially important new studies of HED meteorites which originated from Vesta and the Dawn mission to Vesta in 2011-2012. These studies have concluded that an early melting episode led to the differentiation of Vesta into crust, mantle, and core. This melting episode is attributed to the decay of 26Al, which has a half-life of 7.17 × 105 yr. This heating produced a global magma ocean. Surface cooling of this magma ocean will produce a solid crust. In this paper, we propose a convective heat-transfer mechanism that effectively cools the asteroid when the degree of melting reaches about 50%. We propose that a cool solid surface crust, which is gravitationally unstable, will founder into the solid-liquid mix beneath and will very effectively transfer heat that prevents further melting of the interior. In this paper, we quantify this process. If Vesta had a very early formation, melting would commence at an age of about 1,30,000 yr, and solidification would occur at an age of about 10 Myr. If Vesta formed with a time delay greater than about 2 Myr, no melting would have occurred. An important result of our model is that the early melting episode is restricted to the first 10 Myr. This result is in good agreement with the radiometric ages of the HED meteorites.

Early Stages of the Evolution of Life: a Cybernetic Approach

NASA Astrophysics Data System (ADS)

Melkikh, Alexey V.; Seleznev, Vladimir D.

2008-08-01

Early stages of the evolution of life are considered in terms of control theory. A model is proposed for the transport of substances in a protocell possessing the property of robustness with regard to changes in the environmental concentration of a substance.

Early stages of the evolution of life: a cybernetic approach.

PubMed

Melkikh, Alexey V; Seleznev, Vladimir D

2008-08-01

Early stages of the evolution of life are considered in terms of control theory. A model is proposed for the transport of substances in a protocell possessing the property of robustness with regard to changes in the environmental concentration of a substance.

Long Term Temporal and Spectral Evolution of Point Sources in Nearby Elliptical Galaxies

NASA Astrophysics Data System (ADS)

Durmus, D.; Guver, T.; Hudaverdi, M.; Sert, H.; Balman, Solen

2016-06-01

We present the results of an archival study of all the point sources detected in the lines of sight of the elliptical galaxies NGC 4472, NGC 4552, NGC 4649, M32, Maffei 1, NGC 3379, IC 1101, M87, NGC 4477, NGC 4621, and NGC 5128, with both the Chandra and XMM-Newton observatories. Specifically, we studied the temporal and spectral evolution of these point sources over the course of the observations of the galaxies, mostly covering the 2000 - 2015 period. In this poster we present the first results of this study, which allows us to further constrain the X-ray source population in nearby elliptical galaxies and also better understand the nature of individual point sources.

Early Microbial Evolution: The Age of Anaerobes

PubMed Central

Martin, William F.; Sousa, Filipa L.

2016-01-01

In this article, the term “early microbial evolution” refers to the phase of biological history from the emergence of life to the diversification of the first microbial lineages. In the modern era (since we knew about archaea), three debates have emerged on the subject that deserve discussion: (1) thermophilic origins versus mesophilic origins, (2) autotrophic origins versus heterotrophic origins, and (3) how do eukaryotes figure into early evolution. Here, we revisit those debates from the standpoint of newer data. We also consider the perhaps more pressing issue that molecular phylogenies need to recover anaerobic lineages at the base of prokaryotic trees, because O2 is a product of biological evolution; hence, the first microbes had to be anaerobes. If molecular phylogenies do not recover anaerobes basal, something is wrong. Among the anaerobes, hydrogen-dependent autotrophs—acetogens and methanogens—look like good candidates for the ancestral state of physiology in the bacteria and archaea, respectively. New trees tend to indicate that eukaryote cytosolic ribosomes branch within their archaeal homologs, not as sisters to them and, furthermore tend to root archaea within the methanogens. These are major changes in the tree of life, and open up new avenues of thought. Geochemical methane synthesis occurs as a spontaneous, abiotic exergonic reaction at hydrothermal vents. The overall similarity between that reaction and biological methanogenesis fits well with the concept of a methanogenic root for archaea and an autotrophic origin of microbial physiology. PMID:26684184

The Supercritical Pile GRB Model: The Prompt to Afterglow Evolution

NASA Technical Reports Server (NTRS)

Mastichiadis, A.; Kazanas, D.

2009-01-01

The "Supercritical Pile" is a very economical GRB model that provides for the efficient conversion of the energy stored in the protons of a Relativistic Blast Wave (RBW) into radiation and at the same time produces - in the prompt GRB phase, even in the absence of any particle acceleration - a spectral peak at energy approx. 1 MeV. We extend this model to include the evolution of the RBW Lorentz factor Gamma and thus follow its spectral and temporal features into the early GRB afterglow stage. One of the novel features of the present treatment is the inclusion of the feedback of the GRB produced radiation on the evolution of Gamma with radius. This feedback and the presence of kinematic and dynamic thresholds in the model can be the sources of rich time evolution which we have began to explore. In particular. one can this may obtain afterglow light curves with steep decays followed by the more conventional flatter afterglow slopes, while at the same time preserving the desirable features of the model, i.e. the well defined relativistic electron source and radiative processes that produce the proper peak in the (nu)F(sub nu), spectra. In this note we present the results of a specific set of parameters of this model with emphasis on the multiwavelength prompt emission and transition to the early afterglow.

WINGS-SPE. III. Equivalent width measurements, spectral properties, and evolution of local cluster galaxies

NASA Astrophysics Data System (ADS)

Fritz, J.; Poggianti, B. M.; Cava, A.; Moretti, A.; Varela, J.; Bettoni, D.; Couch, W. J.; D'Onofrio D'Onofrio, M.; Dressler, A.; Fasano, G.; Kjærgaard, P.; Marziani, P.; Moles, M.; Omizzolo, A.

2014-06-01

Context. Cluster galaxies are the ideal sites to look at when studying the influence of the environment on the various aspects of the evolution of galaxies, such as the changes in their stellar content and morphological transformations. In the framework of wings, the WIde-field Nearby Galaxy-cluster Survey, we have obtained optical spectra for ~6000 galaxies selected in fields centred on 48 local (0.04 < z < 0.07) X-ray selected clusters to tackle these issues. Aims: By classifying the spectra based on given spectral lines, we investigate the frequency of the various spectral types as a function of both the clusters' properties and the galaxies' characteristics. In this way, using the same classification criteria adopted for studies at higher redshift, we can consistently compare the properties of the local cluster population to those of their more distant counterparts. Methods: We describe a method that we have developed to automatically measure the equivalent width of spectral lines in a robust way, even in spectra with a non optimal signal-to-noise ratio. This way, we can derive a spectral classification reflecting the stellar content, based on the presence and strength of the [Oii] and Hδ lines. Results: After a quality check, we are able to measure 4381 of the ~6000 originally observed spectra in the fields of 48 clusters, of which 2744 are spectroscopically confirmed cluster members. The spectral classification is then analysed as a function of galaxies' luminosity, stellar mass, morphology, local density, and host cluster's global properties and compared to higher redshift samples (MORPHS and EDisCS). The vast majority of galaxies in the local clusters population are passive objects, being also the most luminous and massive. At a magnitude limit of MV < -18, galaxies in a post-starburst phase represent only ~11% of the cluster population, and this fraction is reduced to ~5% at MV < -19.5, which compares to the 18% at the same magnitude limit for high

Evolution of early embryogenesis in rhabditid nematodes

PubMed Central

Brauchle, Michael; Kiontke, Karin; MacMenamin, Philip; Fitch, David H. A.; Piano, Fabio

2009-01-01

The cell biological events that guide early embryonic development occur with great precision within species but can be quite diverse across species. How these cellular processes evolve and which molecular components underlie evolutionary changes is poorly understood. To begin to address these questions, we systematically investigated early embryogenesis, from the one- to the four-cell embryo, in 34 nematode species related to C. elegans. We found 40 cell-biological characters that captured the phenotypic differences between these species. By tracing the evolutionary changes on a molecular phylogeny, we found that these characters evolved multiple times and independently of one another. Strikingly, all these phenotypes are mimicked by single-gene RNAi experiments in C. elegans. We use these comparisons to hypothesize the molecular mechanisms underlying the evolutionary changes. For example, we predict that a cell polarity module was altered during the evolution of the Protorhabditis group and show that PAR-1, a kinase localized asymmetrically in C. elegans early embryos, is symmetrically localized in the one-cell stage of Protorhabditis group species. Our genome-wide approach identifies candidate molecules—and thereby modules—associated with evolutionary changes in cell-biological phenotypes. PMID:19643102

Early time evolution of a chemically produced electron depletion

NASA Technical Reports Server (NTRS)

Scales, W. A.; Bernhardt, P. A.; Ganguli, G.

1995-01-01

The early time evolution of an ionospheric electron depletion produced by a radially expanding electron attachment chemical release is studied with a two-dimensional simulation model. The model includes electron attachment chemistry, incorporates fluid electrons, particle ions and neutrals, and considers the evolution in a plane perpendicular to the geomagnetic field for a low beta plasma. Timescales considered are of the order of or less than the cyclotron period of the negative ions that result as a by-product of the electron attacment reaction. This corresponds to time periods of tenths of seconds during recent experiemts. Simulation results show that a highly sheared azimuthal electron flow velocity develops in the radially expanding depletion boundary. This sheared electron flow velocity and the steep density gradients in the boundary give rise to small-scale irregulatities in the form of electron density cavities and spikes. The nonlinear evolution of these irregularities results in trapping and ultimately turbulent heating of the negative ions.

Lithosphere-Atmosphere coupling: Spectral element modeling of the evolution of acoustic waves in the atmosphere from an underground source.

NASA Astrophysics Data System (ADS)

Averbuch, Gil; Price, Colin

2015-04-01

Lithosphere-Atmosphere coupling: Spectral element modeling of the evolution of acoustic waves in the atmosphere from an underground source. G. Averbuch, C. Price Department of Geosciences, Tel Aviv University, Israel Infrasound is one of the four Comprehensive Nuclear-Test Ban Treaty technologies for monitoring nuclear explosions. This technology measures the acoustic waves generated by the explosions followed by their propagation through the atmosphere. There are also natural phenomena that can act as an infrasound sources like sprites, volcanic eruptions and earthquakes. The infrasound waves generated from theses phenomena can also be detected by the infrasound arrays. In order to study the behavior of these waves, i.e. the physics of wave propagation in the atmosphere, their evolution and their trajectories, numerical methods are required. This presentation will deal with the evolution of acoustic waves generated by underground sources (earthquakes and underground explosions). A 2D Spectral elements formulation for lithosphere-atmosphere coupling will be presented. The formulation includes the elastic wave equation for the seismic waves and the momentum, mass and state equations for the acoustic waves in a moving stratified atmosphere. The coupling of the two media is made by boundary conditions that ensures the continuity of traction and velocity (displacement) in the normal component to the interface. This work has several objectives. The first is to study the evolution of acoustic waves in the atmosphere from an underground source. The second is to derive transmission coefficients for the energy flux with respect to the seismic magnitude and earth density. The third will be the generation of seismic waves from acoustic waves in the atmosphere. Is it possible?

Fragile Spectral and Temporal Auditory Processing in Adolescents with Autism Spectrum Disorder and Early Language Delay

ERIC Educational Resources Information Center

Boets, Bart; Verhoeven, Judith; Wouters, Jan; Steyaert, Jean

2015-01-01

We investigated low-level auditory spectral and temporal processing in adolescents with autism spectrum disorder (ASD) and early language delay compared to matched typically developing controls. Auditory measures were designed to target right versus left auditory cortex processing (i.e. frequency discrimination and slow amplitude modulation (AM)…

Inflaton and metric fluctuations in the early universe from a 5D vacuum state

NASA Astrophysics Data System (ADS)

Membiela, Agustin; Bellini, Mauricio

2006-04-01

In this Letter we complete a previously introduced formalism to study the gauge-invariant metric fluctuations from a noncompact Kaluza Klein theory of gravity, to study the evolution of the early universe. The evolution of both, metric and inflaton field fluctuations are reciprocally related. We obtain that <δρ>/ρ depends on the coupling of Φ with δφ and the spectral index of its spectrum is 0.9483

Spectral-domain optical coherence tomography of roth spots.

PubMed

Giovinazzo, Jerome; Mrejen, Sarah; Freund, K Bailey

2013-01-01

To describe the retinal findings of subacute bacterial endocarditis, their evolution after treatment, and analysis with spectral-domain optical coherence tomography. Retrospective chart review. A 21-year-old man presented with the sudden onset of a central scotoma in his left eye because of a sub-internal limiting membrane hemorrhage overlying the left fovea. When examined 2 weeks later, Roth spots were noted in his right eye. The patient was immediately referred to his internist and diagnosed with subacute bacterial endocarditis with cultures positive for Streptococcus viridans. He subsequently underwent aortic valve replacement surgery after 4 weeks of intravenous antibiotic therapy. When examined 4 weeks after valve replacement surgery, there was regression of the Roth spots. The present case demonstrates the importance of a funduscopic examination in the early diagnosis and management of subacute bacterial endocarditis. The analysis of Roth spots with spectral-domain optical coherence tomography suggested that they were septic emboli.

The early evolution of feathers: fossil evidence from Cretaceous amber of France

PubMed Central

Perrichot, Vincent; Marion, Loïc; Néraudeau, Didier; Vullo, Romain; Tafforeau, Paul

2008-01-01

The developmental stages of feathers are of major importance in the evolution of body covering and the origin of avian flight. Until now, there were significant gaps in knowledge of early morphologies in theoretical stages of feathers as well as in palaeontological material. Here we report fossil evidence of an intermediate and critical stage in the incremental evolution of feathers which has been predicted by developmental theories but hitherto undocumented by evidence from both the recent and the fossil records. Seven feathers have been found in an Early Cretaceous (Late Albian, ca 100 Myr) amber of western France, which display a flattened shaft composed by the still distinct and incompletely fused bases of the barbs forming two irregular vanes. Considering their remarkably primitive features, and since recent discoveries have yielded feathers of modern type in some derived theropod dinosaurs, the Albian feathers from France might have been derived either from an early bird or from a non-avian dinosaur. PMID:18285280

The Formation and Early Evolution of Embedded Massive Star Clusters

NASA Astrophysics Data System (ADS)

Barnes, Peter

We propose to combine Spitzer, WISE, Herschel, and other archival spacecraft data with an existing ground- and space-based mm-wave to near-IR survey of molecular clouds over a large portion of the Milky Way, in order to systematically study the formation and early evolution of massive stars and star clusters, and provide new observational calibrations for a theoretical paradigm of this key astrophysical problem. Central Objectives: The Galactic Census of High- and Medium-mass Protostars (CHaMP) is a large, unbiased, uniform, and panchromatic survey of massive star and cluster formation and early evolution, covering 20°x6° of the Galactic Plane. Its uniqueness lies in the comprehensive molecular spectroscopy of 303 massive dense clumps, which have also been included in several archival spacecraft surveys. Our objective is a systematic demographic analysis of massive star and cluster formation, one which has not been possible without knowledge of our CHaMP cloud sample, including all clouds with embedded clusters as well as those that have not yet formed massive stars. For proto-clusters deeply embedded within dense molecular clouds, analysis of these space-based data will: 1. Yield a complete census of Young Stellar Objects in each cluster. 2. Allow systematic measurements of embedded cluster properties: spectral energy distributions, luminosity functions, protostellar and disk fractions, and how these vary with cluster mass, age, and density. Combined with other, similarly complete and unbiased infrared and mm data, CHaMP's goals include: 3. A detailed comparison of the embedded stellar populations with their natal dense gas to derive extinction maps, star formation efficiencies and feedback effects, and the kinematics, physics, and chemistry of the gas in and around the clusters. 4. Tying the demographics, age spreads, and timescales of the clusters, based on pre-Main Sequence evolution, to that of the dense gas clumps and Giant Molecular Clouds. 5. A

Spectral lags in different episodes of gamma-ray bursts

NASA Astrophysics Data System (ADS)

Jia, LanWei; Yi, TingFeng; Liang, EnWei

2013-08-01

A systematical analysis of the spectral lags in different episodes within a gamma-ray burst (GRB) for the BATSE GRB sample is given. The identified episodes are usually a single pulse with mixing of small fluctuations. The spectral lags were calculated for lightcurves in the 25-55 keV and 110-320 keV bands. No universal spectral lag evolution feature in different episodes within a GRB were found for most GRBs. Among 362 bright GRBs that have at least three well-identified episodes, 19 of them show long-to-short lag and 19 of them show short-to-long lag in successive episodes. The other 324 GRBs have no clear evolution trend. Defining the specified lag with the ratio of the spectral lag to the episode duration in 110-320 keV band, no prominent case of specified lag was found showing clear evolution features. The results suggest that the observed spectral lag may contribute to the dynamics and/or the radiation physics of a given emission episode.

The Origin and Early Evolution of Membrane Proteins

NASA Technical Reports Server (NTRS)

Pohorille, Andrew; Schweighofer, Karl; Wilson, Michael A.

2005-01-01

Membrane proteins mediate functions that are essential to all cells. These functions include transport of ions, nutrients and waste products across cell walls, capture of energy and its transduction into the form usable in chemical reactions, transmission of environmental signals to the interior of the cell, cellular growth and cell volume regulation. In the absence of membrane proteins, ancestors of cell (protocells), would have had only very limited capabilities to communicate with their environment. Thus, it is not surprising that membrane proteins are quite common even in simplest prokaryotic cells. Considering that contemporary membrane channels are large and complex, both structurally and functionally, a question arises how their presumably much simpler ancestors could have emerged, perform functions and diversify in early protobiological evolution. Remarkably, despite their overall complexity, structural motifs in membrane proteins are quite simple, with a-helices being most common. This suggests that these proteins might have evolved from simple building blocks. To explain how these blocks could have organized into functional structures, we performed large-scale, accurate computer simulations of folding peptides at a water-membrane interface, their insertion into the membrane, self-assembly into higher-order structures and function. The results of these simulations, combined with analysis of structural and functional experimental data led to the first integrated view of the origin and early evolution of membrane proteins.

Robust regression and posterior predictive simulation increase power to detect early bursts of trait evolution.

PubMed

Slater, Graham J; Pennell, Matthew W

2014-05-01

A central prediction of much theory on adaptive radiations is that traits should evolve rapidly during the early stages of a clade's history and subsequently slowdown in rate as niches become saturated--a so-called "Early Burst." Although a common pattern in the fossil record, evidence for early bursts of trait evolution in phylogenetic comparative data has been equivocal at best. We show here that this may not necessarily be due to the absence of this pattern in nature. Rather, commonly used methods to infer its presence perform poorly when when the strength of the burst--the rate at which phenotypic evolution declines--is small, and when some morphological convergence is present within the clade. We present two modifications to existing comparative methods that allow greater power to detect early bursts in simulated datasets. First, we develop posterior predictive simulation approaches and show that they outperform maximum likelihood approaches at identifying early bursts at moderate strength. Second, we use a robust regression procedure that allows for the identification and down-weighting of convergent taxa, leading to moderate increases in method performance. We demonstrate the utility and power of these approach by investigating the evolution of body size in cetaceans. Model fitting using maximum likelihood is equivocal with regards the mode of cetacean body size evolution. However, posterior predictive simulation combined with a robust node height test return low support for Brownian motion or rate shift models, but not the early burst model. While the jury is still out on whether early bursts are actually common in nature, our approach will hopefully facilitate more robust testing of this hypothesis. We advocate the adoption of similar posterior predictive approaches to improve the fit and to assess the adequacy of macroevolutionary models in general.

THE SPECTRAL EVOLUTION OF CONVECTIVE MIXING WHITE DWARFS, THE NON-DA GAP, AND WHITE DWARF COSMOCHRONOLOGY

DOE Office of Scientific and Technical Information (OSTI.GOV)

Chen, Eugene Y.; Hansen, Brad M. S., E-mail: eyc@mail.utexas.edu, E-mail: hansen@astro.ucla.edu

The spectral distribution of field white dwarfs shows a feature called the 'non-DA gap'. As defined by Bergeron et al., this is a temperature range (5100-6100 K) where relatively few non-DA stars are found, even though such stars are abundant on either side of the gap. It is usually viewed as an indication that a significant fraction of white dwarfs switch their atmospheric compositions back and forth between hydrogen-rich and helium-rich as they cool. In this Letter, we present a Monte Carlo model of the Galactic disk white dwarf population, based on the spectral evolution model of Chen and Hansen.more » We find that the non-DA gap emerges naturally, even though our model only allows white dwarf atmospheres to evolve monotonically from hydrogen-rich to helium-rich through convective mixing. We conclude by discussing the effects of convective mixing on the white dwarf luminosity function and the use thereof for Cosmochronology.« less

A New Basal Sauropod Dinosaur from the Middle Jurassic of Niger and the Early Evolution of Sauropoda

PubMed Central

Remes, Kristian; Ortega, Francisco; Fierro, Ignacio; Joger, Ulrich; Kosma, Ralf; Marín Ferrer, José Manuel; Ide, Oumarou Amadou; Maga, Abdoulaye

2009-01-01

Background The early evolution of sauropod dinosaurs is poorly understood because of a highly incomplete fossil record. New discoveries of Early and Middle Jurassic sauropods have a great potential to lead to a better understanding of early sauropod evolution and to reevaluate the patterns of sauropod diversification. Principal Findings A new sauropod from the Middle Jurassic of Niger, Spinophorosaurus nigerensis n. gen. et sp., is the most complete basal sauropod currently known. The taxon shares many anatomical characters with Middle Jurassic East Asian sauropods, while it is strongly dissimilar to Lower and Middle Jurassic South American and Indian forms. A possible explanation for this pattern is a separation of Laurasian and South Gondwanan Middle Jurassic sauropod faunas by geographic barriers. Integration of phylogenetic analyses and paleogeographic data reveals congruence between early sauropod evolution and hypotheses about Jurassic paleoclimate and phytogeography. Conclusions Spinophorosaurus demonstrates that many putatively derived characters of Middle Jurassic East Asian sauropods are plesiomorphic for eusauropods, while South Gondwanan eusauropods may represent a specialized line. The anatomy of Spinophorosaurus indicates that key innovations in Jurassic sauropod evolution might have taken place in North Africa, an area close to the equator with summer-wet climate at that time. Jurassic climatic zones and phytogeography possibly controlled early sauropod diversification. PMID:19756139

Early animal evolution: emerging views from comparative biology and geology

NASA Technical Reports Server (NTRS)

Knoll, A. H.; Carroll, S. B.

1999-01-01

The Cambrian appearance of fossils representing diverse phyla has long inspired hypotheses about possible genetic or environmental catalysts of early animal evolution. Only recently, however, have data begun to emerge that can resolve the sequence of genetic and morphological innovations, environmental events, and ecological interactions that collectively shaped Cambrian evolution. Assembly of the modern genetic tool kit for development and the initial divergence of major animal clades occurred during the Proterozoic Eon. Crown group morphologies diversified in the Cambrian through changes in the genetic regulatory networks that organize animal ontogeny. Cambrian radiation may have been triggered by environmental perturbation near the Proterozoic-Cambrian boundary and subsequently amplified by ecological interactions within reorganized ecosystems.

Early evolution of vertebrate photoreception: lessons from lampreys and lungfishes.

PubMed

Collin, Shaun P

2009-03-01

Lampreys (Agnatha) and lungfish (Dipnoi) are representatives of the earliest and the intermediate stages in vertebrate evolution, respectively, and survived in the Cambrian (approximately 540 mA, lampreys) and Devonian (approximately 400 mA, lungfishes) Periods. The unique phylogenetic position of these two groups presents us with an exciting opportunity to understand life in ancient times and to begin to trace the evolution of vision and photoreception in vertebrates. Using a multidisciplinary approach employing anatomical and molecular techniques, the evolution of photoreception is explored in these extant, living fossils to predict the environmental lighting conditions to which our vertebrate ancestors were exposed. Contrary to expectations, the retinae of the southern hemisphere lamprey (Geotria australis Gray, 1851) and the Australian lungfish (Neoceratodus forsteri Krefft, 1870) are far from "primitive," each possessing five types of photoreceptors, many with spectral filters for tuning the light. Detailed ultrastructural analysis reveals that all five receptor types in G. australis are cone-like, whereas N. forsteri possesses four cone types and a single type of rod. Each receptor type also contains a different visual pigment (opsin gene); that is, LWS, SWS1, SWS2, RhA and RhB in G. australis and LWS, SWS1, SWS2, Rh1 and Rh2 in N. forsteri, all of which are expressed within the retina and are sensitive to different parts of the electromagnetic spectrum, providing the potential for pentachromatic and tetrachromatic color vision, respectively. © 2009 ISZS, Blackwell Publishing and IOZ/CAS.

Molecular clocks and the early evolution of metazoan nervous systems.

PubMed

Wray, Gregory A

2015-12-19

The timing of early animal evolution remains poorly resolved, yet remains critical for understanding nervous system evolution. Methods for estimating divergence times from sequence data have improved considerably, providing a more refined understanding of key divergences. The best molecular estimates point to the origin of metazoans and bilaterians tens to hundreds of millions of years earlier than their first appearances in the fossil record. Both the molecular and fossil records are compatible, however, with the possibility of tiny, unskeletonized, low energy budget animals during the Proterozoic that had planktonic, benthic, or meiofaunal lifestyles. Such animals would likely have had relatively simple nervous systems equipped primarily to detect food, avoid inhospitable environments and locate mates. The appearance of the first macropredators during the Cambrian would have changed the selective landscape dramatically, likely driving the evolution of complex sense organs, sophisticated sensory processing systems, and diverse effector systems involved in capturing prey and avoiding predation. © 2015 The Author(s).

Could Martian Strawberries Be? -- Prebiotic Chemical Evolution on an Early Wet Mars

NASA Astrophysics Data System (ADS)

Lerman, L.

2005-03-01

The universality of chemical physics dictates the ubiquity of bubbles, aerosols, and droplets on planets with water and simple amphiphiles. Their ability to functionally support prebiotic chemical evolution seems critical: on the early Earth and Mars, and quite likely for Titan and Europa.

Contributions of Planetary Science to Studies of Early Biosphere Evolution

NASA Technical Reports Server (NTRS)

Farmer, Jack D.; Chang, Sherwood (Technical Monitor)

1995-01-01

The history of impact cratering on the Moon, and extrapolations of crater chronologies to the inner planets, suggests that the late accretionary history of the Earth overlapped with other crucial events in the its history, including the origin of terrestrial life. This evidence, acquired from studies of other planetary bodies in the inner solar system, has profoundly affected how we view the early history of the Earth and evolution of the biosphere. Pre-biotic chemical evolution and the origin of life would have been delayed by the probable existence of a global magma ocean until -4.2 Ga. The early crust was largely destroyed by recycling, thus accounting for the sparse Archean record on Earth. Once life had developed, large impacts may have extinguished it several times before it finally gained a foothold. Potentially sterilizing impacts could have occurred as late as 3.7 Ga. At the very least, large impacts would have forced the biosphere through major environmental "bottlenecks" thereby canalizing its subsequent evolution. One legacy of these early events may be the structure of the present RNA-tree which indicates that extreme thermophiles are primitive within the Archaea, and may be the last common ancestors of life. By 3.5 Ga, marine sedimentary sequences contain unequivocal microbial fossils that attest to the presence of a terrestrial biosphere. The diversity of microbial forms present in these earliest fossil assemblages implies a preceding interval of evolution during which major evolutionary advances (e.g. photosynthesis) could have taken place. Evidence cited above places the origin of life within the interval 3.5 and 4.2 Ga, a period of 700 Ma. Thus, it appears that terrestrial life not only evolved rapidly, but perhaps more than once. This expands the possibilities that life may have also developed elsewhere. Of the other planets in our solar system, Mars holds the greatest chance of having developed life. But, the present surface of Mars is hostile

Chandra Early Type Galaxy Atals

NASA Astrophysics Data System (ADS)

Kim, Dong-Woo; Anderson, Craig; Burke, Douglas J.; Fabbiano, Giuseppina; Fruscione, Antonella; Lauer, Jennifer; McCollough, Michael; Morgan, Douglas; Mossman, Amy; O'Sullivan, Ewan; Paggi, Alessandro; Vrtilek, Saeqa Dil; Trinchieri, Ginevra

2017-08-01

The hot gas in early type galaxies (ETGs) plays a crucial role in understanding their formation and evolution. As the hot gas is often extended to the outskirts beyond the optical size, the large scale structural features identified by Chandra (including jets, cavities, cold fronts, filaments and tails) point to key evolutionary mechanisms, e.g., AGN feedback, merging history, accretion, stripping and star formation and its quenching. We have systematically analyzed the archival Chandra data of ~100 ETGs to study the hot ISM. We produce the uniformly derived data products with spatially resolved spectral information and will make them accessible via a public web site. With 2D spectral infomation, we further discuss gas morphology, scaling relations, X-ray based mass profiles and their implications related to various physical mechanisms (e.g., stellar and AGN feedback).

Early-late life trade-offs and the evolution of ageing in the wild.

PubMed

Lemaître, Jean-François; Berger, Vérane; Bonenfant, Christophe; Douhard, Mathieu; Gamelon, Marlène; Plard, Floriane; Gaillard, Jean-Michel

2015-05-07

Empirical evidence for declines in fitness components (survival and reproductive performance) with age has recently accumulated in wild populations, highlighting that the process of senescence is nearly ubiquitous in the living world. Senescence patterns are highly variable among species and current evolutionary theories of ageing propose that such variation can be accounted for by differences in allocation to growth and reproduction during early life. Here, we compiled 26 studies of free-ranging vertebrate populations that explicitly tested for a trade-off between performance in early and late life. Our review brings overall support for the presence of early-late life trade-offs, suggesting that the limitation of available resources leads individuals to trade somatic maintenance later in life for high allocation to reproduction early in life. We discuss our results in the light of two closely related theories of ageing-the disposable soma and the antagonistic pleiotropy theories-and propose that the principle of energy allocation roots the ageing process in the evolution of life-history strategies. Finally, we outline research topics that should be investigated in future studies, including the importance of natal environmental conditions in the study of trade-offs between early- and late-life performance and the evolution of sex-differences in ageing patterns. © 2015 The Author(s) Published by the Royal Society. All rights reserved.

The Dramatic Size and Kinematic Evolution of Massive Early-type Galaxies

NASA Astrophysics Data System (ADS)

Lapi, A.; Pantoni, L.; Zanisi, L.; Shi, J.; Mancuso, C.; Massardi, M.; Shankar, F.; Bressan, A.; Danese, L.

2018-04-01

We aim to provide a holistic view on the typical size and kinematic evolution of massive early-type galaxies (ETGs) that encompasses their high-z star-forming progenitors, their high-z quiescent counterparts, and their configurations in the local Universe. Our investigation covers the main processes playing a relevant role in the cosmic evolution of ETGs. Specifically, their early fast evolution comprises biased collapse of the low angular momentum gaseous baryons located in the inner regions of the host dark matter halo; cooling, fragmentation, and infall of the gas down to the radius set by the centrifugal barrier; further rapid compaction via clump/gas migration toward the galaxy center, where strong heavily dust-enshrouded star formation takes place and most of the stellar mass is accumulated; and ejection of substantial gas amount from the inner regions by feedback processes, which causes a dramatic puffing-up of the stellar component. In the late slow evolution, passive aging of stellar populations and mass additions by dry merger events occur. We describe these processes relying on prescriptions inspired by basic physical arguments and by numerical simulations to derive new analytical estimates of the relevant sizes, timescales, and kinematic properties for individual galaxies along their evolution. Then we obtain quantitative results as a function of galaxy mass and redshift, and compare them to recent observational constraints on half-light size R e , on the ratio v/σ between rotation velocity and velocity dispersion (for gas and stars) and on the specific angular momentum j ⋆ of the stellar component; we find good consistency with the available multiband data in average values and dispersion, both for local ETGs and for their z ∼ 1–2 star-forming and quiescent progenitors. The outcomes of our analysis can provide hints to gauge sub-grid recipes implemented in simulations, to tune numerical experiments focused on specific processes, and to plan

Origin and evolution of the atmospheres of early Venus, Earth and Mars

NASA Astrophysics Data System (ADS)

Lammer, Helmut; Zerkle, Aubrey L.; Gebauer, Stefanie; Tosi, Nicola; Noack, Lena; Scherf, Manuel; Pilat-Lohinger, Elke; Güdel, Manuel; Grenfell, John Lee; Godolt, Mareike; Nikolaou, Athanasia

2018-05-01

We review the origin and evolution of the atmospheres of Earth, Venus and Mars from the time when their accreting bodies were released from the protoplanetary disk a few million years after the origin of the Sun. If the accreting planetary cores reached masses ≥ 0.5 M_Earth before the gas in the disk disappeared, primordial atmospheres consisting mainly of H_2 form around the young planetary body, contrary to late-stage planet formation, where terrestrial planets accrete material after the nebula phase of the disk. The differences between these two scenarios are explored by investigating non-radiogenic atmospheric noble gas isotope anomalies observed on the three terrestrial planets. The role of the young Sun's more efficient EUV radiation and of the plasma environment into the escape of early atmospheres is also addressed. We discuss the catastrophic outgassing of volatiles and the formation and cooling of steam atmospheres after the solidification of magma oceans and we describe the geochemical evidence for additional delivery of volatile-rich chondritic materials during the main stages of terrestrial planet formation. The evolution scenario of early Earth is then compared with the atmospheric evolution of planets where no active plate tectonics emerged like on Venus and Mars. We look at the diversity between early Earth, Venus and Mars, which is found to be related to their differing geochemical, geodynamical and geophysical conditions, including plate tectonics, crust and mantle oxidation processes and their involvement in degassing processes of secondary N_2 atmospheres. The buildup of atmospheric N_2, O_2, and the role of greenhouse gases such as CO_2 and CH_4 to counter the Faint Young Sun Paradox (FYSP), when the earliest life forms on Earth originated until the Great Oxidation Event ≈ 2.3 Gyr ago, are addressed. This review concludes with a discussion on the implications of understanding Earth's geophysical and related atmospheric evolution in relation

Symbiosis in cell evolution: Life and its environment on the early earth

NASA Technical Reports Server (NTRS)

Margulis, L.

1981-01-01

The book treats cell evolution from the viewpoint of the serial endosymbiosis theory of the origin of organelles. Following a brief outline of the symbiotic theory, which holds that eukaryotes evolved by the association of free-living bacteria with a host prokaryote, the diversity of life is considered, and five kingdoms of organisms are distinguished: the prokaryotic Monera and the eukaryotic Protoctista, Animalia, Fungi and Plantae. Symbiotic and traditional direct filiation theories of cell evolution are compared. Recent observations of cell structure and biochemistry are reviewed in relation to early cell evolution, with attention given to the geological context for the origin of eukaryotic cells, the origin of major bacterial anaerobic pathways, the relationship between aerobic metabolism and atmospheric oxygen, criteria for distinguishing symbiotic organelles from those that originated by differentiation, and the major classes of eukaryotic organelles: mitochondria, cilia, microtubules, the mitotic and meiotic apparatuses, and pastids. Cell evolution during the Phanerozoic is also discussed with emphasis on the effects of life on the biosphere

Light Curve and Spectral Evolution of Type IIb Supernovae

NASA Astrophysics Data System (ADS)

Gangopadhyay, Anjasha; Misra, Kuntal; Pastorello, Andrea; Sahu, Devendra Kumar; Singh, Mridweeka; Dastidar, raya; Anapuma, Gadiyara Chakrapani; Kumar, Brijesh; Pandey, Shashi Bhushan

2018-04-01

Stripped-Envelope Supernovae constitute the sub-class of core-collapse supernovae that strip off their outer hydrogen envelope due to high stellar winds or due to interaction with a binary companion where mass transfer occurs as a result of Roche lobe overflow. We present here the photometric and spectroscopic analysis of a member of this class : SN 2015as classified as a type IIb supernova. Light curve features are similar to those of SN 2011fu while spectroscopic features are quite similar to those of SN 2008ax and SN 2011dh. Early epoch spectra have been modelled with SYN++ which indicates a photospheric velocity of 8500 km sec-1 and temperature of 6500K. Spectroscopic lines show transitioning from H to He features confirming it to be a type IIb supernova. Prominent oxygen and calcium emission features are indicative of the asymmetry of the ejecta. We also estimate the signal to noise ratio of the 3.6m telescope data. This telescope is located at ARIES, Devasthal, Nainital at an altitude of 2450m. We also show the comparison plots of spectra taken with a 2m and 4m class telescopes to enlighten the importance of spectral features displayed by bigger diameter telescopes.

Spectral State Evolution of 4U 1820-30: the Stability of the Spectral Index of Comptonization Tail

NASA Technical Reports Server (NTRS)

Titarchuk, Lev G.; Seifina, Elena; Frontera, Filippo

2013-01-01

We analyze the X-ray spectra and their timing properties of the compact Xray binary 4U 1820-30. We establish spectral transitions in this source seen with BeppoSAX and the Rossi X-ray Timing Explorer (RXTE). During the RXTE observations (1996 - 2009), the source were approximately approximately 75% of its time in the soft state making the lower banana and upper banana transitions combined with long-term low-high state transitions. We reveal that all of the X-ray spectra of 4U 1820-30 are fit by a composition of a thermal (blackbody) component, a Comptonization component (COMPTB) and a Gaussian-line component. Thus using this spectral analysis we find that the photon power-law index Gamma of the Comptonization component is almost unchangeable (Gamma approximately 2) while the electron temperature kTe changes from 2.9 to 21 keV during these spectral events. We also establish that for these spectral events the normalization of COMPTB component (which is proportional to mass accretion rate ?M) increases by factor 8 when kTe decreases from 21 keV to 2.9 keV. Before this index stability effect was also found analyzing X-ray data for Z-source GX 340+0 and for atolls, 4U 1728-34, GX 3+1. Thus, we can suggest that this spectral stability property is a spectral signature of an accreting neutron star source. On the other hand in a black hole binary G monotonically increases with ?Mand ultimately its value saturates at large ?M.

Time-dependent spectral renormalization method

NASA Astrophysics Data System (ADS)

Cole, Justin T.; Musslimani, Ziad H.

2017-11-01

The spectral renormalization method was introduced by Ablowitz and Musslimani (2005) as an effective way to numerically compute (time-independent) bound states for certain nonlinear boundary value problems. In this paper, we extend those ideas to the time domain and introduce a time-dependent spectral renormalization method as a numerical means to simulate linear and nonlinear evolution equations. The essence of the method is to convert the underlying evolution equation from its partial or ordinary differential form (using Duhamel's principle) into an integral equation. The solution sought is then viewed as a fixed point in both space and time. The resulting integral equation is then numerically solved using a simple renormalized fixed-point iteration method. Convergence is achieved by introducing a time-dependent renormalization factor which is numerically computed from the physical properties of the governing evolution equation. The proposed method has the ability to incorporate physics into the simulations in the form of conservation laws or dissipation rates. This novel scheme is implemented on benchmark evolution equations: the classical nonlinear Schrödinger (NLS), integrable PT symmetric nonlocal NLS and the viscous Burgers' equations, each of which being a prototypical example of a conservative and dissipative dynamical system. Numerical implementation and algorithm performance are also discussed.

Evolution and ecology of retinal photoreception in early vertebrates.

PubMed

Collin, Shaun P

2010-01-01

Visual ecology or the relationship between the visual system of an animal and its environment has proven to be a crucial research field for establishing general concepts of adaptation, specialization and evolution. The visual neuroscientist is indeed confronted with a plethora of different visual characteristics, each seemingly optimised for each species' ecological niche, but often without a clear understanding of the evolutionary constraints at play. However, before we are able to fully understand the influence(s) of ecology and phylogeny on visual system design in vertebrates, it is first necessary to understand the basic bauplan of key representatives of each taxa. This review examines photoreception in hagfishes, lampreys, cartilaginous fishes and lungfishes with an eye to their ecology using a range of neurobiological methods including anatomy, microspectrophotometry and molecular genetics. These early vertebrates represent critical stages in evolution and surprisingly possess a level of visual complexity that is almost unrivalled in other vertebrates. 2010 S. Karger AG, Basel.

The early evolution of eukaryotes - A geological perspective

NASA Technical Reports Server (NTRS)

Knoll, Andrew H.

1992-01-01

This paper examines the goodness of fit between patterns of biological and environmental history implied by molecular phylogenies of eukaryotic organisms and the geological records of early eukaryote evolution. It was found that Precambrian geological records show evidence that episodic increases in biological diversity roughly coincided with episodic environmental changes and by sharp increases in atmospheric oxygen concentrations which significantly changed the earth surface environments. Although the goodness of fit among physical and biological changes is gratifyingly high, the records of these changes do not always coincide in time. The additional information in these fields that is needed for complete integration of geological and phylogenic records is suggested.

Late stages of accumulation and early evolution of the planets

NASA Technical Reports Server (NTRS)

Vityazev, Andrey V.; Perchernikova, G. V.

1991-01-01

Recently developed solutions of problems are discussed that were traditionally considered fundamental in classical solar system cosmogony: determination of planetary orbit distribution patterns, values for mean eccentricity and orbital inclinations of the planets, and rotation periods and rotation axis inclinations of the planets. Two important cosmochemical aspects of accumulation are examined: the time scale for gas loss from the terrestrial planet zone, and the composition of the planets in terms of isotope data. It was concluded that the early beginning of planet differentiation is a function of the heating of protoplanets during collisions with large (thousands of kilometers) bodies. Energetics, heat mass transfer processes, and characteristic time scales of these processes at the early stages of planet evolution are considered.

Black hole evolution by spectral methods

NASA Astrophysics Data System (ADS)

Kidder, Lawrence E.; Scheel, Mark A.; Teukolsky, Saul A.; Carlson, Eric D.; Cook, Gregory B.

2000-10-01

Current methods of evolving a spacetime containing one or more black holes are plagued by instabilities that prohibit long-term evolution. Some of these instabilities may be due to the numerical method used, traditionally finite differencing. In this paper, we explore the use of a pseudospectral collocation (PSC) method for the evolution of a spherically symmetric black hole spacetime in one dimension using a hyperbolic formulation of Einstein's equations. We demonstrate that our PSC method is able to evolve a spherically symmetric black hole spacetime forever without enforcing constraints, even if we add dynamics via a Klein-Gordon scalar field. We find that, in contrast with finite-differencing methods, black hole excision is a trivial operation using PSC applied to a hyperbolic formulation of Einstein's equations. We discuss the extension of this method to three spatial dimensions.

Iterative filtering decomposition based on local spectral evolution kernel

PubMed Central

Wang, Yang; Wei, Guo-Wei; Yang, Siyang

2011-01-01

The synthesizing information, achieving understanding, and deriving insight from increasingly massive, time-varying, noisy and possibly conflicting data sets are some of most challenging tasks in the present information age. Traditional technologies, such as Fourier transform and wavelet multi-resolution analysis, are inadequate to handle all of the above-mentioned tasks. The empirical model decomposition (EMD) has emerged as a new powerful tool for resolving many challenging problems in data processing and analysis. Recently, an iterative filtering decomposition (IFD) has been introduced to address the stability and efficiency problems of the EMD. Another data analysis technique is the local spectral evolution kernel (LSEK), which provides a near prefect low pass filter with desirable time-frequency localizations. The present work utilizes the LSEK to further stabilize the IFD, and offers an efficient, flexible and robust scheme for information extraction, complexity reduction, and signal and image understanding. The performance of the present LSEK based IFD is intensively validated over a wide range of data processing tasks, including mode decomposition, analysis of time-varying data, information extraction from nonlinear dynamic systems, etc. The utility, robustness and usefulness of the proposed LESK based IFD are demonstrated via a large number of applications, such as the analysis of stock market data, the decomposition of ocean wave magnitudes, the understanding of physiologic signals and information recovery from noisy images. The performance of the proposed method is compared with that of existing methods in the literature. Our results indicate that the LSEK based IFD improves both the efficiency and the stability of conventional EMD algorithms. PMID:22350559

The origin and early evolution of life on earth

NASA Technical Reports Server (NTRS)

Oro, J.; Miller, Stanley L.; Lazcano, Antonio

1990-01-01

Results of the studies that have provided insights into the cosmic and primitive earth environments are reviewed with emphasis on those environments in which life is thought to have originated. The evidence bearing on the antiquity of life on the earth and the prebiotic significance of organic compounds found in interstellar clouds and in primitive solar-system bodies such as comets, dark asteroids, and carbonaceous chondrites are assessed. The environmental models of the Hadean and early Archean earth are discussed, as well as the prebiotic formation of organic monomers and polymers essential to life. The processes that may have led to the appearance in the Archean of the first cells are considered, and possible effects of these processes on the early steps of biological evolution are analyzed. The significance of these results to the study of the distribution of life in the universe is evaluated.

A continued role for signaling functions in the early evolution of feathers.

PubMed

Ruxton, Graeme D; Persons Iv, W Scott; Currie, Philip J

2017-03-01

Persons and Currie (2015) argued against either flight, thermoregulation, or signaling as a functional benefit driving the earliest evolution of feathers; rather, they favored simple feathers having an initial tactile sensory function, which changed to a thermoregulatory function as density increased. Here, we explore the relative merits of early simple feathers that may have originated as tactile sensors progressing instead toward a signaling, rather than (or in addition to) a thermoregulatory function. We suggest that signaling could act in concert with a sensory function more naturally than could thermoregulation. As such, the dismissal of a possible signaling function and the presumption that an initial sensory function led directly to a thermoregulatory function (implicit in the title "bristles before down") are premature. © 2017 The Author(s). Evolution © 2017 The Society for the Study of Evolution.

Early Pleistocene third metacarpal from Kenya and the evolution of modern human-like hand morphology

PubMed Central

Ward, Carol V.; Tocheri, Matthew W.; Plavcan, J. Michael; Brown, Francis H.; Manthi, Fredrick Kyalo

2014-01-01

Despite discoveries of relatively complete hands from two early hominin species (Ardipithecus ramidus and Australopithecus sediba) and partial hands from another (Australopithecus afarensis), fundamental questions remain about the evolution of human-like hand anatomy and function. These questions are driven by the paucity of hand fossils in the hominin fossil record between 800,000 and 1.8 My old, a time interval well documented for the emergence and subsequent proliferation of Acheulian technology (shaped bifacial stone tools). Modern and Middle to Late Pleistocene humans share a suite of derived features in the thumb, wrist, and radial carpometacarpal joints that is noticeably absent in early hominins. Here we show that one of the most distinctive features of this suite in the Middle Pleistocene to recent human hand, the third metacarpal styloid process, was present ∼1.42 Mya in an East African hominin from Kaitio, West Turkana, Kenya. This fossil thus provides the earliest unambiguous evidence for the evolution of a key shared derived characteristic of modern human and Neandertal hand morphology and suggests that the distinctive complex of radial carpometacarpal joint features in the human hand arose early in the evolution of the genus Homo and probably in Homo erectus sensu lato. PMID:24344276

THE EVOLUTION OF EARLY- AND LATE-TYPE GALAXIES IN THE COSMIC EVOLUTION SURVEY UP TO z {approx} 1.2

DOE Office of Scientific and Technical Information (OSTI.GOV)

Pannella, Maurilio; Gabasch, Armin; Drory, Niv

2009-08-10

The Cosmic Evolution Survey (COSMOS) allows for the first time a highly significant census of environments and structures up to redshift 1, as well as a full morphological description of the galaxy population. In this paper we present a study aimed to constrain the evolution, in the redshift range 0.2 < z < 1.2, of the mass content of different morphological types and its dependence on the environmental density. We use a deep multicolor catalog, covering an area of {approx}0.7 deg{sup 2} inside the COSMOS field, with accurate photometric redshifts (i {approx}< 26.5 and {delta}z/(z {sub spec} + 1) {approx}more » 0.035). We estimate galaxy stellar masses by fitting the multicolor photometry to a grid of composite stellar population models. We quantitatively describe the galaxy morphology by fitting point-spread function convolved Sersic profiles to the galaxy surface brightness distributions down to F814 = 24 mag for a sample of 41,300 objects. We confirm an evolution of the morphological mix with redshift: the higher the redshift the more disk-dominated galaxies become important. We find that the morphological mix is a function of the local comoving density: the morphology density relation extends up to the highest redshift explored. The stellar mass function of disk-dominated galaxies is consistent with being constant with redshift. Conversely, the stellar mass function of bulge-dominated systems shows a decline in normalization with redshift. Such different behaviors of late-types and early-types stellar mass functions naturally set the redshift evolution of the transition mass. We find a population of relatively massive, early-type galaxies, having high specific star formation rate (SSFR) and blue colors which live preferentially in low-density environments. The bulk of massive (>7 x 10{sup 10} M {sub sun}) early-type galaxies have similar characteristic ages, colors, and SSFRs independently of the environment they belong to, with those hosting the oldest stars

Spectral Imaging of Portolan Charts

NASA Astrophysics Data System (ADS)

France, Fenella G.; Wilson, Meghan A.; Ghez, Anita

2018-05-01

Spectral imaging of Portolan Charts, early nautical charts, provided extensive new information about their construction and creation. The origins of the portolan chart style have been a continual source of perplexity to numerous generations of cartographic historians. The spectral imaging system utilized incorporates a 50 megapixel mono-chrome camera with light emitting diode (LED) illumination panels that cover the range from 365 nm to 1050 nm to capture visible and non-visible information. There is little known about how portolan charts evolved, and what influenced their creation. These early nautical charts began as working navigational tools of medieval mariners, initially made in the 1300s in Italy, Portugal and Spain; however the origin and development of the portolan chart remained shrouded in mystery. Questions about these early navigational charts included whether colorants were commensurate with the time period and geographical location, and if different, did that give insight into trade routes, or possible later additions to the charts? For example; spectral data showed the red pigment on both the 1320 portolan chart and the 1565 Galapagos Islands matched vermillion, an opaque red pigment used since antiquity. The construction of these charts was also of great interest. Spectral imaging with a range of illumination modes revealed the presence of a "hidden circle" often referred to in relation to their construction. This paper will present in-depth analysis of how spectral imaging of the Portolans revealed similarities and differences, new hidden information and shed new light on construction and composition.

The early evolution of Jean Piaget's clinical method.

PubMed

Mayer, Susan Jean

2005-11-01

This article analyzes the early evolution of Jean Piaget's renowned "clinical method" in order to investigate the method's strikingly original and generative character. Throughout his 1st decade in the field, Piaget frequently discussed and justified the many different approaches to data collection he used. Analysis of his methodological progression during this period reveals that Piaget's determination to access the genuine convictions of children eventually led him to combine 3 distinct traditions in which he had been trained-naturalistic observation, psychometrics, and the psychiatric clinical examination. It was in this amalgam, first evident in his 4th text, that Piaget discovered the clinical dynamic that would drive the classic experiments for which he is most well known.

Tracer evolution in winds generated by a global spectral mechanistic model

NASA Technical Reports Server (NTRS)

Nielsen, J. E.; Rood, Richard B.; Couglass, Anne R.; Cerniglia, Mark C.; Allen, Dale J.; Rosenfield, Joan E.

1994-01-01

The lower boundary of a spectral mechanistic model is prescribed with 100 hPa geopotentials, and its performance during a November 1989 through March 1990 integration is compared with National Meteorological Center observations. Although the stratopause temperatures quickly become biased near the pole in both hemispheres, the model develops a residual mean circulation which shows significant descent over the winter pole and ascent in the tropics and over the summer pole at pressures less than 10 hPa. The daily correspondence of observed to modeled features in the upper stratosphere and mesosphere degrades after one month. However, the long-term variability qualitatively follows the observations. The results of off-line transport experiments are also described. A passive tracer is instantaneously injected into the flow over the poles and evolves in a manner which is consistent with the residual mean circulation. It demonstrates a significant cross-equatorial flux in the mesosphere near solstice, and air which originates in the southern hemisphere polar mesosphere can be found descending deep into the nothern polar stratosphere at the end of the integration. Nitrous oxide is also transported, and its ability to act as a dynamical tracer is evaluated by comparison to the evolution of the passive tracer.

Recent Structural Evolution of Early-Type Galaxies: Size Growth from z = 1 to z = 0

NASA Astrophysics Data System (ADS)

van der Wel, Arjen; Holden, Bradford P.; Zirm, Andrew W.; Franx, Marijn; Rettura, Alessandro; Illingworth, Garth D.; Ford, Holland C.

2008-11-01

Strong size and internal density evolution of early-type galaxies between z ~ 2 and the present has been reported by several authors. Here we analyze samples of nearby and distant (z ~ 1) galaxies with dynamically measured masses in order to confirm the previous, model-dependent results and constrain the uncertainties that may play a role. Velocity dispersion (σ) measurements are taken from the literature for 50 morphologically selected 0.8 < z < 1.2 field and cluster early-type galaxies with typical masses Mdyn = 2 × 1011 M⊙. Sizes (Reff) are determined with Advanced Camera for Surveys imaging. We compare the distant sample with a large sample of nearby (0.04 < z < 0.08) early-type galaxies extracted from the Sloan Digital Sky Survey for which we determine sizes, masses, and densities in a consistent manner, using simulations to quantify systematic differences between the size measurements of nearby and distant galaxies. We find a highly significant difference between the σ - Reff distributions of the nearby and distant samples, regardless of sample selection effects. The implied evolution in Reff at fixed mass between z = 1 and the present is a factor of 1.97 +/- 0.15. This is in qualitative agreement with semianalytic models; however, the observed evolution is much faster than the predicted evolution. Our results reinforce and are quantitatively consistent with previous, photometric studies that found size evolution of up to a factor of 5 since z ~ 2. A combination of structural evolution of individual galaxies through the accretion of companions and the continuous formation of early-type galaxies through increasingly gas-poor mergers is one plausible explanation of the observations. Based on observations with the Hubble Space Telescope, obtained at the Space Telescope Science Institute, which is operated by AURA, Inc., under NASA contract NAS5-26555, and observations made with the Spitzer Space Telescope, which is operated by the Jet Propulsion Laboratory

Spinal cord evolution in early Homo.

PubMed

Meyer, Marc R; Haeusler, Martin

2015-11-01

The discovery at Nariokotome of the Homo erectus skeleton KNM-WT 15000, with a narrow spinal canal, seemed to show that this relatively large-brained hominin retained the primitive spinal cord size of African apes and that brain size expansion preceded postcranial neurological evolution. Here we compare the size and shape of the KNM-WT 15000 spinal canal with modern and fossil taxa including H. erectus from Dmanisi, Homo antecessor, the European middle Pleistocene hominins from Sima de los Huesos, and Pan troglodytes. In terms of shape and absolute and relative size of the spinal canal, we find all of the Dmanisi and most of the vertebrae of KNM-WT 15000 are within the human range of variation except for the C7, T2, and T3 of KNM-WT 15000, which are constricted, suggesting spinal stenosis. While additional fossils might definitively indicate whether H. erectus had evolved a human-like enlarged spinal canal, the evidence from the Dmanisi spinal canal and the unaffected levels of KNM-WT 15000 show that unlike Australopithecus, H. erectus had a spinal canal size and shape equivalent to that of modern humans. Subadult status is unlikely to affect our results, as spinal canal growth is complete in both individuals. We contest the notion that vertebrae yield information about respiratory control or language evolution, but suggest that, like H. antecessor and European middle Pleistocene hominins from Sima de los Huesos, early Homo possessed a postcranial neurological endowment roughly commensurate to modern humans, with implications for neurological, structural, and vascular improvements over Pan and Australopithecus. Copyright © 2015 Elsevier Ltd. All rights reserved.

Clades reach highest morphological disparity early in their evolution

PubMed Central

Hughes, Martin; Gerber, Sylvain; Wills, Matthew Albion

2013-01-01

There are few putative macroevolutionary trends or rules that withstand scrutiny. Here, we test and verify the purported tendency for animal clades to reach their maximum morphological variety relatively early in their evolutionary histories (early high disparity). We present a meta-analysis of 98 metazoan clades radiating throughout the Phanerozoic. The disparity profiles of groups through time are summarized in terms of their center of gravity (CG), with values above and below 0.50 indicating top- and bottom-heaviness, respectively. Clades that terminate at one of the “big five” mass extinction events tend to have truncated trajectories, with a significantly top-heavy CG distribution overall. The remaining 63 clades show the opposite tendency, with a significantly bottom-heavy mean CG (relatively early high disparity). Resampling tests are used to identify groups with a CG significantly above or below 0.50; clades not terminating at a mass extinction are three times more likely to be significantly bottom-heavy than top-heavy. Overall, there is no clear temporal trend in disparity profile shapes from the Cambrian to the Recent, and early high disparity is the predominant pattern throughout the Phanerozoic. Our results do not allow us to distinguish between ecological and developmental explanations for this phenomenon. To the extent that ecology has a role, however, the paucity of bottom-heavy clades radiating in the immediate wake of mass extinctions suggests that early high disparity more probably results from the evolution of key apomorphies at the base of clades rather than from physical drivers or catastrophic ecospace clearing. PMID:23884651

The oldest known primate skeleton and early haplorhine evolution.

PubMed

Ni, Xijun; Gebo, Daniel L; Dagosto, Marian; Meng, Jin; Tafforeau, Paul; Flynn, John J; Beard, K Christopher

2013-06-06

Reconstructing the earliest phases of primate evolution has been impeded by gaps in the fossil record, so that disagreements persist regarding the palaeobiology and phylogenetic relationships of the earliest primates. Here we report the discovery of a nearly complete and partly articulated skeleton of a primitive haplorhine primate from the early Eocene of China, about 55 million years ago, the oldest fossil primate of this quality ever recovered. Coupled with detailed morphological examination using propagation phase contrast X-ray synchrotron microtomography, our phylogenetic analysis based on total available evidence indicates that this fossil is the most basal known member of the tarsiiform clade. In addition to providing further support for an early dichotomy between the strepsirrhine and haplorhine clades, this new primate further constrains the age of divergence between tarsiiforms and anthropoids. It also strengthens the hypothesis that the earliest primates were probably diurnal, arboreal and primarily insectivorous mammals the size of modern pygmy mouse lemurs.

Spectral mapping tools from the earth sciences applied to spectral microscopy data.

PubMed

Harris, A Thomas

2006-08-01

Spectral imaging, originating from the field of earth remote sensing, is a powerful tool that is being increasingly used in a wide variety of applications for material identification. Several workers have used techniques like linear spectral unmixing (LSU) to discriminate materials in images derived from spectral microscopy. However, many spectral analysis algorithms rely on assumptions that are often violated in microscopy applications. This study explores algorithms originally developed as improvements on early earth imaging techniques that can be easily translated for use with spectral microscopy. To best demonstrate the application of earth remote sensing spectral analysis tools to spectral microscopy data, earth imaging software was used to analyze data acquired with a Leica confocal microscope with mechanical spectral scanning. For this study, spectral training signatures (often referred to as endmembers) were selected with the ENVI (ITT Visual Information Solutions, Boulder, CO) "spectral hourglass" processing flow, a series of tools that use the spectrally over-determined nature of hyperspectral data to find the most spectrally pure (or spectrally unique) pixels within the data set. This set of endmember signatures was then used in the full range of mapping algorithms available in ENVI to determine locations, and in some cases subpixel abundances of endmembers. Mapping and abundance images showed a broad agreement between the spectral analysis algorithms, supported through visual assessment of output classification images and through statistical analysis of the distribution of pixels within each endmember class. The powerful spectral analysis algorithms available in COTS software, the result of decades of research in earth imaging, are easily translated to new sources of spectral data. Although the scale between earth imagery and spectral microscopy is radically different, the problem is the same: mapping material locations and abundances based on unique

Asymptotic stability of spectral-based PDF modeling for homogeneous turbulent flows

NASA Astrophysics Data System (ADS)

Campos, Alejandro; Duraisamy, Karthik; Iaccarino, Gianluca

2015-11-01

Engineering models of turbulence, based on one-point statistics, neglect spectral information inherent in a turbulence field. It is well known, however, that the evolution of turbulence is dictated by a complex interplay between the spectral modes of velocity. For example, for homogeneous turbulence, the pressure-rate-of-strain depends on the integrated energy spectrum weighted by components of the wave vectors. The Interacting Particle Representation Model (IPRM) (Kassinos & Reynolds, 1996) and the Velocity/Wave-Vector PDF model (Van Slooten & Pope, 1997) emulate spectral information in an attempt to improve the modeling of turbulence. We investigate the evolution and asymptotic stability of the IPRM using three different approaches. The first approach considers the Lagrangian evolution of individual realizations (idealized as particles) of the stochastic process defined by the IPRM. The second solves Lagrangian evolution equations for clusters of realizations conditional on a given wave vector. The third evolves the solution of the Eulerian conditional PDF corresponding to the aforementioned clusters. This last method avoids issues related to discrete particle noise and slow convergence associated with Lagrangian particle-based simulations.

Microbes, Mineral Evolution, and the Rise of Microcontinents-Origin and Coevolution of Life with Early Earth.

PubMed

Grosch, Eugene G; Hazen, Robert M

2015-10-01

Earth is the most mineralogically diverse planet in our solar system, the direct consequence of a coevolving geosphere and biosphere. We consider the possibility that a microbial biosphere originated and thrived in the early Hadean-Archean Earth subseafloor environment, with fundamental consequences for the complex evolution and habitability of our planet. In this hypothesis paper, we explore possible venues for the origin of life and the direct consequences of microbially mediated, low-temperature hydrothermal alteration of the early oceanic lithosphere. We hypothesize that subsurface fluid-rock-microbe interactions resulted in more efficient hydration of the early oceanic crust, which in turn promoted bulk melting to produce the first evolved fragments of felsic crust. These evolved magmas most likely included sialic or tonalitic sheets, felsic volcaniclastics, and minor rhyolitic intrusions emplaced in an Iceland-type extensional setting as the earliest microcontinents. With the further development of proto-tectonic processes, these buoyant felsic crustal fragments formed the nucleus of intra-oceanic tonalite-trondhjemite-granitoid (TTG) island arcs. Thus microbes, by facilitating extensive hydrothermal alteration of the earliest oceanic crust through bioalteration, promoted mineral diversification and may have been early architects of surface environments and microcontinents on young Earth. We explore how the possible onset of subseafloor fluid-rock-microbe interactions on early Earth accelerated metavolcanic clay mineral formation, crustal melting, and subsequent metamorphic mineral evolution. We also consider environmental factors supporting this earliest step in geosphere-biosphere coevolution and the implications for habitability and mineral evolution on other rocky planets, such as Mars.

The evolution of early-type galaxies in nearby clusters: breaking the age-metallicity degeneracy with Spitzer IRS Blue Peak-Up Imaging

NASA Astrophysics Data System (ADS)

Bressan, Alessandro; Buson, Lucio; Clemens, Marcel; Danese, Luigi; Granato, Gian Luigi; Panuzzo, Pasquale; Rampazzo, Roberto; Silva, Laura; Valdes, Jose Ramon

2005-06-01

We have shown with Cycle 1 observations that Spitzer has the capability of disentangling age and metallicity in old stellar populations. By looking to the broad emission feature left by dust enshrouded asymptotic giant branch stars above 9.7 microns, Spitzer IRS can provide direct evidence that the colour- magnitude relation of Virgo ellipticals is mainly driven by metallicity. However, with the IRS spectrograph we can only probe the bright tail of the colour-magnitude relation, and only in the nearest cluster. We propose to use IRS Blue Peak-Up, the only Spitzer band that looks directly in the core of that spectral feature, to reach fainter galaxies. We will perform a thorough investigation of early type galaxies along the colour-magnitude relation in Virgo and in Coma clusters. These observations, when coupled with already existing IRAC and Optical-NIR observations, will allow a) an unbiased census of the stellar populations in cluster early type galaxies; b) an estimate of the AGB material recycled into the ISM in these systems; c) a direct check of the universality of the colour- magnitude relation on a wide range of magnitudes; d) a spatial study of the stellar populations within the galaxies, e.g. investigating differences between bulge and disk populations within S0; e) the most secure reference frame with which to compare the evolution of early type galaxies in other environments (groups and field).

Sequential Bottlenecks Drive Viral Evolution in Early Acute Hepatitis C Virus Infection

PubMed Central

McElroy, Kerensa; Gaudieri, Silvana; Pham, Son T.; Chopra, Abha; Cameron, Barbara; Maher, Lisa; Dore, Gregory J.; White, Peter A.; Lloyd, Andrew R.

2011-01-01

Hepatitis C is a pandemic human RNA virus, which commonly causes chronic infection and liver disease. The characterization of viral populations that successfully initiate infection, and also those that drive progression to chronicity is instrumental for understanding pathogenesis and vaccine design. A comprehensive and longitudinal analysis of the viral population was conducted in four subjects followed from very early acute infection to resolution of disease outcome. By means of next generation sequencing (NGS) and standard cloning/Sanger sequencing, genetic diversity and viral variants were quantified over the course of the infection at frequencies as low as 0.1%. Phylogenetic analysis of reassembled viral variants revealed acute infection was dominated by two sequential bottleneck events, irrespective of subsequent chronicity or clearance. The first bottleneck was associated with transmission, with one to two viral variants successfully establishing infection. The second occurred approximately 100 days post-infection, and was characterized by a decline in viral diversity. In the two subjects who developed chronic infection, this second bottleneck was followed by the emergence of a new viral population, which evolved from the founder variants via a selective sweep with fixation in a small number of mutated sites. The diversity at sites with non-synonymous mutation was higher in predicted cytotoxic T cell epitopes, suggesting immune-driven evolution. These results provide the first detailed analysis of early within-host evolution of HCV, indicating strong selective forces limit viral evolution in the acute phase of infection. PMID:21912520

A Study of Pulse Shape Evolution and X-Ray Reprocessing in Her X-1

NASA Technical Reports Server (NTRS)

Cushman, Paula P.

1998-01-01

This study focused on the pulse shape evolution and spectral properties of the X-ray binary Her X-1 with regard to the well known 35-day cycle of Her X-1. A follow-up set of RXTE observations has been conducted in RXTE AO-2 phase and the two observation sets are being analyzed together. We presented results of early analysis of pulse shape evolution in "Proceedings of the Fourth Compton Symposium". More advanced analysis was presented at the HEAD meeting in November, 1997 in Estes Park, Colorado. A related study of the 35-day cycle using RXTE/ASM data, which laid out the overall picture within which the more detailed PCA observations could be placed has also been conducted. The results of this study have been published. A pair of papers on the detailed pulse evolution and the spectral/color evolution are currently being prepared for publication. Some of the significant results of this study have been a confirmation of the detailed pulse profile changes at the end of the Main High state in HerX-1 first observed by GINGA, observations of the pulse evolution in several Short High states which agree with the pulse evolution pattern predicted using a disk occultation model, observation of a systematic lengthening of the eclipse egress during the Main High state of the 35-day phase and observation of a new type of extended eclipse ingress during which pulsations cease to observed during the Short High state.

Spatio-temporally resolved spectral measurements of laser-produced plasma and semiautomated spectral measurement-control and analysis software

NASA Astrophysics Data System (ADS)

Cao, S. Q.; Su, M. G.; Min, Q.; Sun, D. X.; O'Sullivan, G.; Dong, C. Z.

2018-02-01

A spatio-temporally resolved spectral measurement system of highly charged ions from laser-produced plasmas is presented. Corresponding semiautomated computer software for measurement control and spectral analysis has been written to achieve the best synchronicity possible among the instruments. This avoids the tedious comparative processes between experimental and theoretical results. To demonstrate the capabilities of this system, a series of spatio-temporally resolved experiments of laser-produced Al plasmas have been performed and applied to benchmark the software. The system is a useful tool for studying the spectral structures of highly charged ions and for evaluating the spatio-temporal evolution of laser-produced plasmas.

Temporal variations in early developmental decisions: an engine of forebrain evolution.

PubMed

Bielen, H; Pal, S; Tole, S; Houart, C

2017-02-01

Tight control of developmental timing is pivotal to many major processes in developmental biology, such as patterning, fate specification, cell cycle dynamics, cell migration and connectivity. Temporal change in these ontogenetic sequences is known as heterochrony, a major force in the evolution of body plans and organogenesis. In the last 5 years, studies in fish and rodents indicate that heterochrony in signaling during early development generates diversity in forebrain size and complexity. Here, we summarize these findings and propose that, additionally to spatio-temporal tuning of neurogenesis, temporal and quantitative modulation of signaling events drive pivotal changes in shape, size and complexity of the forebrain across evolution, participating to the generation of diversity in animal behavior and emergence of cognition. Copyright © 2017 Elsevier Ltd. All rights reserved.

SPECTRAL STATE EVOLUTION OF 4U 1820-30: THE STABILITY OF THE SPECTRAL INDEX OF THE COMPTONIZATION TAIL

DOE Office of Scientific and Technical Information (OSTI.GOV)

Titarchuk, Lev; Frontera, Filippo; Seifina, Elena, E-mail: titarchuk@fe.infn.it, E-mail: lev@milkyway.gsfc.nasa.gov, E-mail: frontera@fe.infn.it, E-mail: seif@sai.msu.ru

We analyze the X-ray spectra and their timing properties of the compact X-ray binary 4U 1820-30. We establish spectral transitions in this source seen with BeppoSAX and the Rossi X-ray Timing Explorer (RXTE). During the RXTE observations (1996-2009), the source was in the soft state approximately {approx}75% of the time making the lower banana and upper banana transitions combined with long-term low-high state transitions. We reveal that all of the X-ray spectra of 4U 1820-30 are fit by a combination of a thermal (Blackbody) component, a Comptonization component (COMPTB), and a Gaussian-line component. Thus, using this spectral analysis, we findmore » that the photon power-law index {Gamma} of the Comptonization component is almost unchangeable ({Gamma} {approx} 2), while the electron temperature kT{sub e} changes from 2.9 to 21 keV during these spectral events. We also establish that for these spectral events the normalization of the COMPTB component (which is proportional to the mass accretion rate M-dot ) increases by a factor of eight when kT{sub e} decreases from 21 keV to 2.9 keV. Previously, this index stability effect was also found analyzing X-ray data for the Z-source GX 340+0 and for the atolls 4U 1728-34 and GX 3+1. Thus, we can suggest that this spectral stability property is a spectral signature of an accreting neutron star source. On the other hand, in a black hole binary {Gamma} monotonically increases with M-dot and ultimately its value saturates at large M-dot .« less

Root evolution at the base of the lycophyte clade: insights from an Early Devonian lycophyte

PubMed Central

Matsunaga, Kelly K. S.; Tomescu, Alexandru M. F.

2016-01-01

Background and Aims The evolution of complex rooting systems during the Devonian had significant impacts on global terrestrial ecosystems and the evolution of plant body plans. However, detailed understanding of the pathways of root evolution and the architecture of early rooting systems is currently lacking. We describe the architecture and resolve the structural homology of the rooting system of an Early Devonian basal lycophyte. Insights gained from these fossils are used to address lycophyte root evolution and homology. Methods Plant fossils are preserved as carbonaceous compressions at Cottonwood Canyon (Wyoming), in the Lochkovian–Pragian (∼411 Ma; Early Devonian) Beartooth Butte Formation. We analysed 177 rock specimens and documented morphology, cuticular anatomy and structural relationships, as well as stratigraphic position and taphonomic conditions. Key Results The rooting system of the Cottonwood Canyon lycophyte is composed of modified stems that bear fine, dichotomously branching lateral roots. These modified stems, referred to as root-bearing axes, are produced at branching points of the above-ground shoot system. Root-bearing axes preserved in growth position exhibit evidence of positive gravitropism, whereas the lateral roots extend horizontally. Consistent recurrence of these features in successive populations of the plant preserved in situ demonstrates that they represent constitutive structural traits and not opportunistic responses of a flexible developmental programme. Conclusions This is the oldest direct evidence for a rooting system preserved in growth position. These rooting systems, which can be traced to a parent plant, include some of the earliest roots known to date and demonstrate that substantial plant–substrate interactions were under way by Early Devonian time. The morphological relationships between stems, root-bearing axes and roots corroborate evidence that positive gravitropism and root identity were evolutionarily

Root evolution at the base of the lycophyte clade: insights from an Early Devonian lycophyte.

PubMed

Matsunaga, Kelly K S; Tomescu, Alexandru M F

2016-04-01

The evolution of complex rooting systems during the Devonian had significant impacts on global terrestrial ecosystems and the evolution of plant body plans. However, detailed understanding of the pathways of root evolution and the architecture of early rooting systems is currently lacking. We describe the architecture and resolve the structural homology of the rooting system of an Early Devonian basal lycophyte. Insights gained from these fossils are used to address lycophyte root evolution and homology. Plant fossils are preserved as carbonaceous compressions at Cottonwood Canyon (Wyoming), in the Lochkovian-Pragian (∼411 Ma; Early Devonian) Beartooth Butte Formation. We analysed 177 rock specimens and documented morphology, cuticular anatomy and structural relationships, as well as stratigraphic position and taphonomic conditions. The rooting system of the Cottonwood Canyon lycophyte is composed of modified stems that bear fine, dichotomously branching lateral roots. These modified stems, referred to as root-bearing axes, are produced at branching points of the above-ground shoot system. Root-bearing axes preserved in growth position exhibit evidence of positive gravitropism, whereas the lateral roots extend horizontally. Consistent recurrence of these features in successive populations of the plant preserved in situ demonstrates that they represent constitutive structural traits and not opportunistic responses of a flexible developmental programme. This is the oldest direct evidence for a rooting system preserved in growth position. These rooting systems, which can be traced to a parent plant, include some of the earliest roots known to date and demonstrate that substantial plant-substrate interactions were under way by Early Devonian time. The morphological relationships between stems, root-bearing axes and roots corroborate evidence that positive gravitropism and root identity were evolutionarily uncoupled in lycophytes, and challenge the hypothesis that

Hydrogen, metals, bifurcating electrons, and proton gradients: the early evolution of biological energy conservation.

PubMed

Martin, William F

2012-03-09

Life is a persistent, self-specified set of far from equilibrium chemical reactions. In modern microbes, core carbon and energy metabolism are what keep cells alive. In very early chemical evolution, the forerunners of carbon and energy metabolism were the processes of generating reduced carbon compounds from CO(2) and the mechanisms of harnessing energy as compounds capable of doing some chemical work. The process of serpentinization at alkaline hydrothermal vents holds promise as a model for the origin of early reducing power, because Fe(2+) in the Earth's crust reduces water to H(2) and inorganic carbon to methane. The overall geochemical process of serpentinization is similar to the biochemical process of methanogenesis, and methanogenesis is similar to acetogenesis in that both physiologies allow energy conservation from the reduction of CO(2) with electrons from H(2). Electron bifurcation is a newly recognized cytosolic process that anaerobes use generate low potential electrons, it plays an important role in some forms of methanogenesis and, via speculation, possibly in acetogenesis. Electron bifurcation likely figures into the early evolution of biological energy conservation. Copyright © 2011. Published by Elsevier B.V.

The TIM Barrel Architecture Facilitated the Early Evolution of Protein-Mediated Metabolism.

PubMed

Goldman, Aaron David; Beatty, Joshua T; Landweber, Laura F

2016-01-01

The triosephosphate isomerase (TIM) barrel protein fold is a structurally repetitive architecture that is present in approximately 10% of all enzymes. It is generally assumed that this ubiquity in modern proteomes reflects an essential historical role in early protein-mediated metabolism. Here, we provide quantitative and comparative analyses to support several hypotheses about the early importance of the TIM barrel architecture. An information theoretical analysis of protein structures supports the hypothesis that the TIM barrel architecture could arise more easily by duplication and recombination compared to other mixed α/β structures. We show that TIM barrel enzymes corresponding to the most taxonomically broad superfamilies also have the broadest range of functions, often aided by metal and nucleotide-derived cofactors that are thought to reflect an earlier stage of metabolic evolution. By comparison to other putatively ancient protein architectures, we find that the functional diversity of TIM barrel proteins cannot be explained simply by their antiquity. Instead, the breadth of TIM barrel functions can be explained, in part, by the incorporation of a broad range of cofactors, a trend that does not appear to be shared by proteins in general. These results support the hypothesis that the simple and functionally general TIM barrel architecture may have arisen early in the evolution of protein biosynthesis and provided an ideal scaffold to facilitate the metabolic transition from ribozymes, peptides, and geochemical catalysts to modern protein enzymes.

The Supercritical Pile GRB Model: The Prompt to Afterglow Evolution

NASA Technical Reports Server (NTRS)

Kazanas, Demosthenes

2008-01-01

The 'Supercritical Pile' is a very economical gamma ray burst (GRB) model that provides for the efficient conversion of the energy stored in the protons of a Relativistic Blast Wave (RBW) into radiation and at the same time produces - in the prompt GRB phase, even in the absence of any particle acceleration - a spectral peak at an energy sim 1 MeV. We extend this model to include also the evolution of the RBW Lorentz factor Gamma and thus follow the spectral and temporal features of this model into the early GRB afterglow stage. One of the novel features of the present treatment is the inclusion of the feedback of the GRB produced radiation on the evolution of Gamma with radius. This feedback and the presence of kinematic and dynamic thresholds in the model can be the sources of rich time evolution which we have begun to explore. In particular, one can this way obtain afterglow light curves with steep decays followed by the more conventional flatter afterglow slopes, while at the same time preserving the desirable features of the model, i.e. the well defined relativistic electron source and radiative processes that produce the proper peak in the nu F spectra. Furthermore, the existence of a kinematic threshold in this model provides for a operational distinction of the prompt and afterglow GRB stages; in fact, the afterglow stage sets in when the RBW Lorentz factor cannot anymore fulfill the kinematic condition for pair formation in the photon - proton pair production reactions that constitute the fundamental process for the dissipation of the blast wave kinetic energy. We present the results of a specific set of parameters of this model with emphasis on the multiwavelength prompt emission and transition to the early afterglow.

The Atmospheres of the Terrestrial Planets:Clues to the Origins and Early Evolution of Venus, Earth, and Mars

NASA Technical Reports Server (NTRS)

Baines, Kevin H.; Atreya, Sushil K.; Bullock, Mark A.; Grinspoon, David H,; Mahaffy, Paul; Russell, Christopher T.; Schubert, Gerald; Zahnle, Kevin

2015-01-01

We review the current state of knowledge of the origin and early evolution of the three largest terrestrial planets - Venus, Earth, and Mars - setting the stage for the chapters on comparative climatological processes to follow. We summarize current models of planetary formation, as revealed by studies of solid materials from Earth and meteorites from Mars. For Venus, we emphasize the known differences and similarities in planetary bulk properties and composition with Earth and Mars, focusing on key properties indicative of planetary formation and early evolution, particularly of the atmospheres of all three planets. We review the need for future in situ measurements for improving our understanding of the origin and evolution of the atmospheres of our planetary neighbors and Earth, and suggest the accuracies required of such new in situ data. Finally, we discuss the role new measurements of Mars and Venus have in understanding the state and evolution of planets found in the habitable zones of other stars.

Time-resolved spectral analysis of Radachlorin luminescence in water

NASA Astrophysics Data System (ADS)

Belik, V. P.; Gadzhiev, I. M.; Semenova, I. V.; Vasyutinskii, O. S.

2017-05-01

We report results of spectral- and time-resolved study of Radachlorin photosensitizer luminescence in water in the spectral range of 950-1350nm and for determination of the photosensitizer triplet state and the singlet oxygen lifetimes responsible for singlet oxygen generation and degradation. At any wavelength within the explored spectral range the luminescence decay contained two major contributions: a fast decay at the ns time scale and a slow evolution at the μs time scale. The fast decay was attributed to electric dipole fluorescence transitions in photosensitizer molecules and the slow evolution to intercombination phosphorescence transitions in singlet oxygen and photosensitizer molecules. Relatively high-amplitude ns peak observed at all wavelengths suggests that singlet oxygen monitoring with spectral isolation methods alone, without additional temporal resolution can be controversial. In the applied experimental conditions the total phosphorescence signal at any wavelength contained a contribution from the photosensitizer triplet state decay, while at 1274nm the singlet oxygen phosphorescence dominated. The results obtained can be used for optimization of the methods of singlet oxygen monitoring and imaging.

Dynamics of modulated beams in spectral domain

DOE PAGES

Yampolsky, Nikolai A.

2017-07-16

General formalism for describing dynamics of modulated beams along linear beamlines is developed. We describe modulated beams with spectral distribution function which represents Fourier transform of the conventional beam distribution function in the 6-dimensional phase space. The introduced spectral distribution function is localized in some region of the spectral domain for nearly monochromatic modulations. It can be characterized with a small number of typical parameters such as the lowest order moments of the spectral distribution. We study evolution of the modulated beams in linear beamlines and find that characteristic spectral parameters transform linearly. The developed approach significantly simplifies analysis ofmore » various schemes proposed for seeding X-ray free electron lasers. We use this approach to study several recently proposed schemes and find the bandwidth of the output bunching in each case.« less

Crustal evolution of the early earth: The role of major impacts

NASA Technical Reports Server (NTRS)

Frey, H.

1979-01-01

The role of major impact basins (such as those which formed on the moon before 4 billion years ago) is examined to determine the effects of such impacts on the early crustal evolution of the earth. Specifically addressed is the fundamental problem of what is the origin of the earth's fundamental crustal dichotomy of low density continental and high density oceanic crust and its relationship to the superficially similar highlands/maria crustal dichotomies of the moon, Mercury and Mars.

Endocranial morphology of Palaeocene Plesiadapis tricuspidens and evolution of the early primate brain.

PubMed

Orliac, Maeva J; Ladevèze, Sandrine; Gingerich, Philip D; Lebrun, Renaud; Smith, Thierry

2014-04-22

Expansion of the brain is a key feature of primate evolution. The fossil record, although incomplete, allows a partial reconstruction of changes in primate brain size and morphology through time. Palaeogene plesiadapoids, closest relatives of Euprimates (or crown-group primates), are crucial for understanding early evolution of the primate brain. However, brain morphology of this group remains poorly documented, and major questions remain regarding the initial phase of euprimate brain evolution. Micro-CT investigation of the endocranial morphology of Plesiadapis tricuspidens from the Late Palaeocene of Europe--the most complete plesiadapoid cranium known--shows that plesiadapoids retained a very small and simple brain. Plesiadapis has midbrain exposure, and minimal encephalization and neocorticalization, making it comparable with that of stem rodents and lagomorphs. However, Plesiadapis shares a domed neocortex and downwardly shifted olfactory-bulb axis with Euprimates. If accepted phylogenetic relationships are correct, then this implies that the euprimate brain underwent drastic reorganization during the Palaeocene, and some changes in brain structure preceded brain size increase and neocortex expansion during evolution of the primate brain.

Early post-metamorphic, Carboniferous blastoid reveals the evolution and development of the digestive system in echinoderms.

PubMed

Rahman, Imran A; Waters, Johnny A; Sumrall, Colin D; Astolfo, Alberto

2015-10-01

Inferring the development of the earliest echinoderms is critical to uncovering the evolutionary assembly of the phylum-level body plan but has long proven problematic because early ontogenetic stages are rarely preserved as fossils. Here, we use synchrotron tomography to describe a new early post-metamorphic blastoid echinoderm from the Carboniferous (approx. 323 Ma) of China. The resulting three-dimensional reconstruction reveals a U-shaped tubular structure in the fossil interior, which is interpreted as the digestive tract. Comparisons with the developing gut of modern crinoids demonstrate that crinoids are an imperfect analogue for many extinct groups. Furthermore, consideration of our findings in a phylogenetic context allows us to reconstruct the evolution and development of the digestive system in echinoderms more broadly; there was a transition from a straight to a simple curved gut early in the phylum's evolution, but additional loops and coils of the digestive tract (as seen in crinoids) were not acquired until much later. © 2015 The Author(s).

The origin and early evolution of life on Earth.

PubMed

Oró, J; Miller, S L; Lazcano, A

1990-01-01

We do not have a detailed knowledge of the processes that led to the appearance of life on Earth. In this review we bring together some of the most important results that have provided insights into the cosmic and primitive Earth environments, particularly those environments in which life is thought to have originated. To do so, we first discuss the evidence bearing on the antiquity of life on our planet and the prebiotic significance of organic compounds found in interstellar clouds and in primitive solar system bodies such as comets, dark asteroids, and carbonaceous chondrites. This is followed by a discussion on the environmental models of the Hadean and early Archean Earth, as well as on the prebiotic formation of organic monomers and polymers essential to life. We then consider the processes that may have led to the appearance in the Archean of the first cells, and how these processes may have affected the early steps of biological evolution. Finally, the significance of these results to the study of the distribution of life in the Universe is discussed.

A construction of standardized near infrared hyper-spectral teeth database: a first step in the development of reliable diagnostic tool for quantification and early detection of caries

NASA Astrophysics Data System (ADS)

Bürmen, Miran; Usenik, Peter; Fidler, Aleš; Pernuš, Franjo; Likar, Boštjan

2011-03-01

Dental caries is a disease characterized by demineralization of enamel crystals leading to the penetration of bacteria into the dentin and pulp. If left untreated, the disease can lead to pain, infection and tooth loss. Early detection of enamel demineralization resulting in increased enamel porosity, commonly known as white spots, is a difficult diagnostic task. Several papers reported on near infrared (NIR) spectroscopy to be a potentially useful noninvasive spectroscopic technique for early detection of caries lesions. However, the conducted studies were mostly qualitative and did not include the critical assessment of the spectral variability of the sound and carious dental tissues and influence of the water content. Such assessment is essential for development and validation of reliable qualitative and especially quantitative diagnostic tools based on NIR spectroscopy. In order to characterize the described spectral variability, a standardized diffuse reflectance hyper-spectral database was constructed by imaging 12 extracted human teeth with natural lesions of various degrees in the spectral range from 900 to 1700 nm with spectral resolution of 10 nm. Additionally, all the teeth were imaged by digital color camera. The influence of water content on the acquired spectra was characterized by monitoring the teeth during the drying process. The images were assessed by an expert, thereby obtaining the gold standard. By analyzing the acquired spectra we were able to accurately model the spectral variability of the sound dental tissues and identify the advantages and limitations of NIR hyper-spectral imaging.

Large-Scale Impact Cratering and Early Earth Evolution

NASA Technical Reports Server (NTRS)

Grieve, R. A. F.; Cintala, M. J.

1997-01-01

The surface of the Moon attests to the importance of large-scale impact in its early crustal evolution. Previous models of the effects of a massive bombardment on terrestrial crustal evolution have relied on analogies with the Moon, with allowances for the presence of water and a thinner lithosphere. It is now apparent that strict lunar-terrestrial analogies are incorrect because of the "differential scaling" of crater dimensions and melt volumes with event size and planetary gravity. Impact melt volumes and "ancient cavity dimensions for specific impacts were modeled according to previous procedures. In the terrestrial case, the melt volume (V(sub m)) exceeds that of the transient cavity (V(sub tc)) at diameters > or = 400 km. This condition is reached on the Moon only with transient cavity diameters > or = 3000 km, equivalent to whole Moon melting. The melt volumes in these large impact events are minimum estimates, since, at these sizes, the higher temperature of the target rocks at depth will increase melt production. Using the modification-scaling relation of Croft, a transient cavity diameter of about 400 km in the terrestrial environment corresponds to an expected final impact "basin" diameter of about 900 km. Such a "basin" would be comparable in dimensions to the lunar basin Orientale. This 900-km "basin" on the early Earth, however, would not have had the appearance of Orientale. It would have been essentially a melt pool, and, morphologically, would have had more in common with the palimpsests structures on Callisto and Ganymede. With the terrestrial equivalents to the large multiring basins of the Moon being manifested as muted palimpsest-like structures filled with impact melt, it is unlikely they played a role in establishing the freeboard on the early Earth. The composition of the massive impact melt sheets (> 10 (exp 7) cu km) produced in "basin-forming" events on the early Earth would have most likely ranged from basaltic to more mafic for the

Early Fault Diagnosis of Bearings Using an Improved Spectral Kurtosis by Maximum Correlated Kurtosis Deconvolution

PubMed Central

Jia, Feng; Lei, Yaguo; Shan, Hongkai; Lin, Jing

2015-01-01

The early fault characteristics of rolling element bearings carried by vibration signals are quite weak because the signals are generally masked by heavy background noise. To extract the weak fault characteristics of bearings from the signals, an improved spectral kurtosis (SK) method is proposed based on maximum correlated kurtosis deconvolution (MCKD). The proposed method combines the ability of MCKD in indicating the periodic fault transients and the ability of SK in locating these transients in the frequency domain. A simulation signal overwhelmed by heavy noise is used to demonstrate the effectiveness of the proposed method. The results show that MCKD is beneficial to clarify the periodic impulse components of the bearing signals, and the method is able to detect the resonant frequency band of the signal and extract its fault characteristic frequency. Through analyzing actual vibration signals collected from wind turbines and hot strip rolling mills, we confirm that by using the proposed method, it is possible to extract fault characteristics and diagnose early faults of rolling element bearings. Based on the comparisons with the SK method, it is verified that the proposed method is more suitable to diagnose early faults of rolling element bearings. PMID:26610501

Body size and premolar evolution in the early-middle eocene euprimates of Wyoming.

PubMed

Jones, Katrina E; Rose, Kenneth D; Perry, Jonathan M G

2014-01-01

The earliest euprimates to arrive in North America were larger-bodied notharctids and smaller-bodied omomyids. Through the Eocene, notharctids generally continued to increase in body size, whereas omomyids generally radiated within small- and increasingly mid-sized niches in the middle Eocene. This study examines the influence of changing body size and diet on the evolution of the lower fourth premolar in Eocene euprimates. The P4 displays considerable morphological variability in these taxa. Despite the fact that most studies of primate dental morphology have focused on the molars, P4 can also provide important paleoecological insights. We analyzed the P4 from 177 euprimate specimens, representing 35 species (11 notharctids and 24 omomyids), in three time bins of approximately equal duration: early Wasatchian, late Wasatchian, and Bridgerian. Two-dimensional surface landmarks were collected from lingual photographs, capturing important variation in cusp position and tooth shape. Disparity metrics were calculated and compared for the three time bins. In the early Eocene, notharctids have a more molarized P4 than omomyids. During the Bridgerian, expanding body size range of omomyids was accompanied by a significant increase in P4 disparity and convergent evolution of the semimolariform condition in the largest omomyines. P4 morphology relates to diet in early euprimates, although patterns vary between families. Copyright © 2013 Wiley Periodicals, Inc.

Sensitivity of visual evoked potentials and spectral domain optical coherence tomography in early relapsing remitting multiple sclerosis.

PubMed

Behbehani, Raed; Ahmed, Samar; Al-Hashel, Jasem; Rousseff, Rossen T; Alroughani, Raed

2017-02-01

Visual evoked potentials and spectral-domain optical coherence tomography are common ancillary studies that assess the visual pathways from a functional and structural aspect, respectively. To compare prevalence of abnormalities of Visual evoked potentials (VEP) and spectral-domain optical coherence tomography (SDOCT) in patients with relapsing remitting multiple sclerosis (RRMS). A cross-sectional study of 100 eyes with disease duration of less than 5 years since the diagnosis. Correlation between retinal nerve fiber layer and ganglion-cell/inner plexiform layer with pattern-reversal visual evoked potentials amplitude and latency and contrast sensitivity was performed. The prevalence of abnormalities in pattern-reversal visual VEP was 56% while that of SOCT was 48% in all eyes. There was significant negative correlations between the average RNFL (r=-0.34, p=0.001) and GCIPL (r=-0.39, p<0.001) with VEP latency. In eyes with prior optic neuritis, a significant negative correlation was seen between average RNFL (r=-0.33, p=0.037) and GCIPL (r=-0.40, p=0.010) with VEP latency. We have found higher prevalence of VEP abnormalities than SCOCT in early relapsing-remitting multiple sclerosis. This suggests that VEP has a higher sensitivity for detecting lesions of the visual pathway in patients with early RRMS. Copyright © 2016 Elsevier B.V. All rights reserved.

Hypermagnetic helicity evolution in early universe: leptogenesis and hypermagnetic diffusion

DOE Office of Scientific and Technical Information (OSTI.GOV)

Semikoz, V.B.; Smirnov, A.Yu.; Sokoloff, D.D., E-mail: semikoz@yandex.ru, E-mail: smirnoff.alexandr@gmail.com, E-mail: sokoloff.dd@gmail.com

2013-10-01

We study hypermagnetic helicity and lepton asymmetry evolution in plasma of the early Universe before the electroweak phase transition (EWPT) accounting for chirality flip processes via inverse Higgs decays and sphaleron transitions which violate the left lepton number and wash out the baryon asymmetry of the Universe (BAU). In the scenario where the right electron asymmetry supports the BAU alone through the conservation law B/3−L{sub eR} = const at temperatures T > T{sub RL} ≅ 10 TeV the following universe cooling leads to the production of a non-zero left lepton (electrons and neutrinos) asymmetry. This is due to the Higgsmore » decays becoming more faster when entering the equilibrium at T = T{sub RL} with the universe expansion, Γ{sub RL} ∼ T > H ∼ T{sup 2}, resulting in the parallel evolution of both the right and the left electron asymmetries at T < T{sub RL} through the corresponding Abelian anomalies in SM in the presence of a seed hypermagnetic field. The hypermagnetic helicity evolution proceeds in a self-consistent way with the lepton asymmetry growth. The role of sphaleron transitions decreasing the left lepton number turns out to be negligible in given scenario. The hypermagnetic helicity can be a supply for the magnetic one in Higgs phase assuming a strong seed hypermagnetic field in symmetric phase.« less

Early bursts of body size and shape evolution are rare in comparative data.

PubMed

Harmon, Luke J; Losos, Jonathan B; Jonathan Davies, T; Gillespie, Rosemary G; Gittleman, John L; Bryan Jennings, W; Kozak, Kenneth H; McPeek, Mark A; Moreno-Roark, Franck; Near, Thomas J; Purvis, Andy; Ricklefs, Robert E; Schluter, Dolph; Schulte Ii, James A; Seehausen, Ole; Sidlauskas, Brian L; Torres-Carvajal, Omar; Weir, Jason T; Mooers, Arne Ø

2010-08-01

George Gaylord Simpson famously postulated that much of life's diversity originated as adaptive radiations-more or less simultaneous divergences of numerous lines from a single ancestral adaptive type. However, identifying adaptive radiations has proven difficult due to a lack of broad-scale comparative datasets. Here, we use phylogenetic comparative data on body size and shape in a diversity of animal clades to test a key model of adaptive radiation, in which initially rapid morphological evolution is followed by relative stasis. We compared the fit of this model to both single selective peak and random walk models. We found little support for the early-burst model of adaptive radiation, whereas both other models, particularly that of selective peaks, were commonly supported. In addition, we found that the net rate of morphological evolution varied inversely with clade age. The youngest clades appear to evolve most rapidly because long-term change typically does not attain the amount of divergence predicted from rates measured over short time scales. Across our entire analysis, the dominant pattern was one of constraints shaping evolution continually through time rather than rapid evolution followed by stasis. We suggest that the classical model of adaptive radiation, where morphological evolution is initially rapid and slows through time, may be rare in comparative data.

Coupling of thermal evolution and despinning of early Iapetus

NASA Astrophysics Data System (ADS)

Robuchon, G.; Choblet, G.; Tobie, G.; Čadek, O.; Sotin, C.; Grasset, O.

2010-06-01

and 15 ppb, initial spin rates smaller than 8.5 h are required. For smaller values of [ 26Al], the body is too cold and viscous to acquire a significant flattening even if a rotation period close to the body disruption limit is considered. Even with a thin lithosphere during the early stage, our simulations show that Iapetus never reaches the equilibrium figure for a hydrostatic body due to the non-zero rigidity of the lithosphere. The 35 km value of the flattening is the result of the partial relaxation of an ancient larger flattening ranging between 45 and 80 km, depending on the evolution of the lithosphere thickness mainly controlled by the radiogenic content. A thin lithosphere is consistent with an early building of the equatorial ridge. The lithosphere thickening due to interior cooling can explain the preservation of the ridge throughout the remaining evolution of Iapetus.

The early Miocene balaenid Morenocetus parvus from Patagonia (Argentina) and the evolution of right whales

PubMed Central

Cozzuol, Mario A.; Fitzgerald, Erich M.G.

2017-01-01

Balaenidae (right and bowhead whales) are a key group in understanding baleen whale evolution, because they are the oldest surviving lineage of crown Mysticeti, with a fossil record that dates back ∼20 million years. However, this record is mostly Pliocene and younger, with most of the Miocene history of the clade remaining practically unknown. The earliest recognized balaenid is the early Miocene Morenocetus parvus Cabrera, 1926 from Argentina. M. parvus was originally briefly described from two incomplete crania, a mandible and some cervical vertebrae collected from the lower Miocene Gaiman Formation of Patagonia. Since then it has not been revised, thus remaining a frequently cited yet enigmatic fossil cetacean with great potential for shedding light on the early history of crown Mysticeti. Here we provide a detailed morphological description of this taxon and revisit its phylogenetic position. The phylogenetic analysis recovered the middle Miocene Peripolocetus as the earliest diverging balaenid, and Morenocetus as the sister taxon of all other balaenids. The analysis of cranial and periotic morphology of Morenocetus suggest that some of the specialized morphological traits of modern balaenids were acquired by the early Miocene and have remained essentially unchanged up to the present. Throughout balaenid evolution, morphological changes in skull arching and ventral displacement of the orbits appear to be coupled and functionally linked to mitigating a reduction of the field of vision. The body length of Morenocetus and other extinct balaenids was estimated and the evolution of body size in Balaenidae was reconstructed. Optimization of body length on our phylogeny of Balaenidae suggests that the primitive condition was a relatively small body length represented by Morenocetus, and that gigantism has been acquired independently at least twice (in Balaena mysticetus and Eubalaena spp.), with the earliest occurrence of this trait in the late Miocene–early

Early cellular evolution.

NASA Technical Reports Server (NTRS)

Margulis, L.

1972-01-01

Study of the evolutionary developments that occurred subsequent to the origin of ancestral cells. Microbial physiology and ecology are potential sharp tools for shaping concepts of microbial evolution. Some popular unjustified assumptions are discussed. It is considered that certain principles derived mainly from the advances of molecular biology can be used to order the natural groups (genera) of extant prokaryotes and their patterns phylogenetically.

Origin and Evolution of The Early- Silurian Land Vascular Plants: Evidence From Biomarkers

NASA Astrophysics Data System (ADS)

Jin, R.

2016-12-01

Origin and early evolution of land vascular plants, is one of the most intriguing hotspots in the life science research. During the 1970s and 1980s,Pinnatiramosus qianensis was found in early-Silurian strata in guizhou of south China.43 years have passed. But so far, the biological characteristics and belonging of the age of this unique plant have been debated again and again, up in the air.Biomarkers have a good stability in the process of organic evolution, no more or less changed, so they have a special `function of mark'. While biomarkers can provide information about organic matter of hydrocarbon source rock (the source), the period of deposition and burial (diagenesis) environmental conditions, and many other aspects of information.This paper obtained the sedimentary environment, source of organic matter input and other relevant information, through extracting and analyzing biomarkers of the 26 samples in the late Ordovician to early Silurian strata in NorthGuizhou areas. According to the results, Pr/Ph of late Ordovician Meitan Fm-early Silurian Hanjiadian Fm is high.It manifests more pristane, characterized by reductive environment. At the bottom of the Hanjiadian Fm, Pr/Ph has a volatility.Some huge environmental changes may have taken place in the corresponding period. N-alkanes do not have parity advantage or has even carbon advantage slightly.The peak carbon is mainly in low carbon number.(C21 + C22)/(C28 + C29) is high.Aquatic organisms is a major source of organic matter during this period,C21-/C22+ is low.This may be caused by the relatively serious loss of light hydrocarbon during the separation of components. In the Hanjiadian Fm,information of C29/C27 sterane ratios and oleanane index showed a trend of rising at the same time, indicating that during this period, there was a gradual increase input in the number of higher plants.The stable carbon isotope of saturated hydrocarbon and aromatic hydrocarbon in the Hanjiadian Fm also gradually become

Present-day cosmic abundances. A comprehensive study of nearby early B-type stars and implications for stellar and Galactic evolution and interstellar dust models

NASA Astrophysics Data System (ADS)

Nieva, M.-F.; Przybilla, N.

2012-03-01

identified as double-lined, indicating the presence of an early/mid B-type companion. Conclusions: A present-day cosmic abundance standard is established from a sample of 29 early B-type stars, indicating abundance fluctuations of less than 10% around the mean. Our results (i) resolve the long-standing discrepancy between a chemical homogeneous gas-phase ISM and a chemically inhomogeneous young stellar component out to several hundred parsec from the Sun, (ii) facilitate the amount of heavy elements locked up in the interstellar dust to be constrained precisely - the results imply that carbonaceous dust is largely destroyed inside the Orion H ii region, unlike the silicates, and that graphite is only a minority species in interstellar dust -, (iii) show that the mixing of CNO-burning products in the course of massive star evolution follows tightly the predicted nuclear path, (iv) provide reliable present-day reference points for anchoring Galactic chemical evolution models to observation, and (v) imply that the Sun has migrated outwards from the inner Galactic disk over its lifetime from a birthplace at a distance around 5-6 kpc from the Galactic Centre; a cancellation of the effects of Galactic chemical evolution and abundance gradients leads to the similarity of solar and present-day cosmic abundances in the solar neighbourhood, with a telltaling signature of the Sun's origin left in the C/O ratio. Based on observations collected at the Centro Astronómico Hispano Alemán (CAHA) at Calar Alto, operated jointly by the Max- Planck Institut für Astronomie and the Instituto de Astrofísica de Andalucía (CSIC), proposals H2001-2.2-011 and H2005-2.2-016. Based on observations collected at the European Southern Observatory, Chile, ESO 074.B-0455(A). Based on spectral data retrieved from the ELODIE archive at Observatoire de Haute-Provence (OHP).Tables 5 and 6 are also available in electronic form at the CDS via anonymous ftp to cdsarc.u-strasbg.fr (130.79.128.5) or via http

Early Evolution of Earth's Geochemical Cycle and Biosphere: Implications for Mars Exobiology

NASA Technical Reports Server (NTRS)

DesMarais, David J.; Chang, Sherwood (Technical Monitor)

1997-01-01

Carbon (C) has played multiple key roles for life and its environment. C has formed organics, greenhouse gases, aquatic pH buffers, redox buffers, and magmatic constituents affecting plutonism and volcanism. These roles interacted across a network of reservoirs and processes known as the biogeochemical C cycle. Changes in the cycle over geologic time were driven by increasing solar luminosity, declining planetary heat flow, and continental and biological evolution. The early Archean C cycle was dominated by hydrothermal alteration of crustal rocks and by thermal emanations of CO2 and reduced species (eg., H2, Fe(2+) and sulfides). Bioorganic synthesis was achieved by nonphotosynthetic CO2-fixing bacteria (chemoautotrophs) and, possibly, bacteria (organotrophs) utilizing any available nonbiological organic C. Responding both to abundant solar energy and to a longterm decline in thermal sources of chemical energy and reducing power, the blaspheme first developed anoxygenic photosynthesis, then, ultimately, oxygenic photosynthesis. O2-photosynthesis played a central role in transforming the ancient environment and blaspheme to the modem world. The geochemical C cycles of early Earth and Mars were quite similar. The principal differences between the modem C cycles of these planets arose during the later evolution of their heat flows, crusts, atmospheres and, perhaps, their blasphemes.

Chemical Evolution and the Formation of Dwarf Galaxies in the Early Universe

NASA Astrophysics Data System (ADS)

Cote, Benoit; JINA-CEE, NuGrid, ChETEC

2018-06-01

Stellar abundances in local dwarf galaxies offer a unique window into the nature and nucleosynthesis of the first stars. They also contain clues regarding how galaxies formed and assembled in the early stages of the universe. In this talk, I will present our effort to connect nuclear astrophysics with the field of galaxy formation in order to define what can be learned about galaxy evolution using stellar abundances. In particular, I will describe the current state of our numerical chemical evolution pipeline which accounts for the mass assembly history of galaxies, present how we use high-redshift cosmological hydrodynamic simulations to calibrate our models and to learn about the formation of dwarf galaxies, and address the challenge of identifying the dominant r-process site(s) using stellar abundances.

When should we expect early bursts of trait evolution in comparative data? Predictions from an evolutionary food web model.

PubMed

Ingram, T; Harmon, L J; Shurin, J B

2012-09-01

Conceptual models of adaptive radiation predict that competitive interactions among species will result in an early burst of speciation and trait evolution followed by a slowdown in diversification rates. Empirical studies often show early accumulation of lineages in phylogenetic trees, but usually fail to detect early bursts of phenotypic evolution. We use an evolutionary simulation model to assemble food webs through adaptive radiation, and examine patterns in the resulting phylogenetic trees and species' traits (body size and trophic position). We find that when foraging trade-offs result in food webs where all species occupy integer trophic levels, lineage diversity and trait disparity are concentrated early in the tree, consistent with the early burst model. In contrast, in food webs in which many omnivorous species feed at multiple trophic levels, high levels of turnover of species' identities and traits tend to eliminate the early burst signal. These results suggest testable predictions about how the niche structure of ecological communities may be reflected by macroevolutionary patterns. © 2012 The Authors. Journal of Evolutionary Biology © 2012 European Society For Evolutionary Biology.

Spectral Cauchy Characteristic Extraction: Gravitational Waves and Gauge Free News

NASA Astrophysics Data System (ADS)

Handmer, Casey; Szilagyi, Bela; Winicour, Jeff

2015-04-01

We present a fast, accurate spectral algorithm for the characteristic evolution of the full non-linear vacuum Einstein field equations in the Bondi framework. Developed within the Spectral Einstein Code (SpEC), we demonstrate how spectral Cauchy characteristic extraction produces gravitational News without confounding gauge effects. We explain several numerical innovations and demonstrate speed, stability, accuracy, exponential convergence, and consistency with existing methods. We highlight its capability to deliver physical insights in the study of black hole binaries.

Fitting Analysis using Differential evolution Optimization (FADO):. Spectral population synthesis through genetic optimization under self-consistency boundary conditions

NASA Astrophysics Data System (ADS)

Gomes, J. M.; Papaderos, P.

2017-07-01

The goal of population spectral synthesis (pss; also referred to as inverse, semi-empirical evolutionary- or fossil record approach) is to decipher from the spectrum of a galaxy the mass, age and metallicity of its constituent stellar populations. This technique, which is the reverse of but complementary to evolutionary synthesis, has been established as fundamental tool in extragalactic research. It has been extensively applied to large spectroscopic data sets, notably the SDSS, leading to important insights into the galaxy assembly history. However, despite significant improvements over the past decade, all current pss codes suffer from two major deficiencies that inhibit us from gaining sharp insights into the star-formation history (SFH) of galaxies and potentially introduce substantial biases in studies of their physical properties (e.g., stellar mass, mass-weighted stellar age and specific star formation rate). These are I) the neglect of nebular emission in spectral fits, consequently; II) the lack of a mechanism that ensures consistency between the best-fitting SFH and the observed nebular emission characteristics of a star-forming (SF) galaxy (e.g., hydrogen Balmer-line luminosities and equivalent widths-EWs, shape of the continuum in the region around the Balmer and Paschen jump). In this article, we present fado (Fitting Analysis using Differential evolution Optimization) - a conceptually novel, publicly available pss tool with the distinctive capability of permitting identification of the SFH that reproduces the observed nebular characteristics of a SF galaxy. This so-far unique self-consistency concept allows us to significantly alleviate degeneracies in current spectral synthesis, thereby opening a new avenue to the exploration of the assembly history of galaxies. The innovative character of fado is further augmented by its mathematical foundation: fado is the first pss code employing genetic differential evolution optimization. This, in conjunction

Spectral Indices of Faint Radio Sources

NASA Astrophysics Data System (ADS)

Gim, Hansung B.; Hales, Christopher A.; Momjian, Emmanuel; Yun, Min Su

2015-01-01

The significant improvement in bandwidth and the resultant sensitivity offered by the Karl G. Jansky Very Large Array (VLA) allows us to explore the faint radio source population. Through the study of the radio continuum we can explore the spectral indices of these radio sources. Robust radio spectral indices are needed for accurate k-corrections, for example in the study of the radio - far-infrared (FIR) correlation. We present an analysis of measuring spectral indices using two different approaches. In the first, we use the standard wideband imaging algorithm in the data reduction package CASA. In the second, we use a traditional approach of imaging narrower bandwidths to derive the spectral indices. For these, we simulated data to match the observing parameter space of the CHILES Con Pol survey (Hales et al. 2014). We investigate the accuracy and precision of spectral index measurements as a function of signal-to noise, and explore the requirements to reliably probe possible evolution of the radio-FIR correlation in CHILES Con Pol.

Molecular spectral imaging system for quantitative immunohistochemical analysis of early diabetic retinopathy.

PubMed

Li, Qingli; Zhang, Jingfa; Wang, Yiting; Xu, Guoteng

2009-12-01

A molecular spectral imaging system has been developed based on microscopy and spectral imaging technology. The system is capable of acquiring molecular spectral images from 400 nm to 800 nm with 2 nm wavelength increments. The basic principles, instrumental systems, and system calibration method as well as its applications for the calculation of the stain-uptake by tissues are introduced. As a case study, the system is used for determining the pathogenesis of diabetic retinopathy and evaluating the therapeutic effects of erythropoietin. Some molecular spectral images of retinal sections of normal, diabetic, and treated rats were collected and analyzed. The typical transmittance curves of positive spots stained for albumin and advanced glycation end products are retrieved from molecular spectral data with the spectral response calibration algorithm. To explore and evaluate the protective effect of erythropoietin (EPO) on retinal albumin leakage of streptozotocin-induced diabetic rats, an algorithm based on Beer-Lambert's law is presented. The algorithm can assess the uptake by histologic retinal sections of stains used in quantitative pathology to label albumin leakage and advanced glycation end products formation. Experimental results show that the system is helpful for the ophthalmologist to reveal the pathogenesis of diabetic retinopathy and explore the protective effect of erythropoietin on retinal cells of diabetic rats. It also highlights the potential of molecular spectral imaging technology to provide more effective and reliable diagnostic criteria in pathology.

A Burst of miRNA Innovation in the Early Evolution of Butterflies and Moths

PubMed Central

Quah, Shan; Hui, Jerome H.L.; Holland, Peter W.H.

2015-01-01

MicroRNAs (miRNAs) are involved in posttranscriptional regulation of gene expression. Because several miRNAs are known to affect the stability or translation of developmental regulatory genes, the origin of novel miRNAs may have contributed to the evolution of developmental processes and morphology. Lepidoptera (butterflies and moths) is a species-rich clade with a well-established phylogeny and abundant genomic resources, thereby representing an ideal system in which to study miRNA evolution. We sequenced small RNA libraries from developmental stages of two divergent lepidopterans, Cameraria ohridella (Horse chestnut Leafminer) and Pararge aegeria (Speckled Wood butterfly), discovering 90 and 81 conserved miRNAs, respectively, and many species-specific miRNA sequences. Mapping miRNAs onto the lepidopteran phylogeny reveals rapid miRNA turnover and an episode of miRNA fixation early in lepidopteran evolution, implying that miRNA acquisition accompanied the early radiation of the Lepidoptera. One lepidopteran-specific miRNA gene, miR-2768, is located within an intron of the homeobox gene invected, involved in insect segmental and wing patterning. We identified cubitus interruptus (ci) as a likely direct target of miR-2768, and validated this suppression using a luciferase assay system. We propose a model by which miR-2768 modulates expression of ci in the segmentation pathway and in patterning of lepidopteran wing primordia. PMID:25576364

Composition and Spectral Evolution of Energetic Ions at Voyager 1 in the Vicinity of the Solar Wind Termination Boundary

NASA Astrophysics Data System (ADS)

Hill, M. E.; Krimigis, S. M.; Hamilton, D. C.; Decker, R. B.; Roelof, E. C.

2003-12-01

For a six-month period beginning in mid-2002, measurements from the Low Energy Charged Particle (LECP) instrument aboard Voyager 1 (V1) indicate that the spacecraft was in a region having a low, subsonic solar wind speed. Before and after this period of interest (POI), the observations indicate higher, supersonic solar wind speeds. During the POI there was a low-energy particle enhancement showing intensity increases up to two orders of magnitude over the preceding period, with a composition that is poor in C, and for which the relative intensities of He and O are consistent with anomalous cosmic ray (ACR) composition. Consistency with ACR composition is determined based on ``species scaling'' arguments associated with transport effects. However, since the ACR peak for H is obscured by galactic cosmic rays, the relative H composition is uncertain and may diverge from ACR levels at higher energies per nucleon or may indeed differ from ACR-like composition. We have argued that these and other observations offer evidence that V1 crossed the termination shock (TS), resided downstream of the TS in the heliosheath for about six months, and then re-crossed the TS (which has a variable position), thus reentering the region of supersonic solar wind plasma early in 2003. To investigate this event further, we are undertaking analysis on time scales shorter than the entire six-month period, including the investigation of energy spectra using higher temporal resolution. The noted difference between the expected idealized TS spectrum and that which we observe is reduced when shorter time intervals are examined. There are also possible spectral features indicative of the transport of a very local ACR-like population from the TS to V1 in the upstream region just before and after the POI. Using the LECP instrument, which affords the lowest energy particle measurements from V1, we will pursue the ion composition by considering, e.g., the species scaling in light of the possible

Ancestral Ca2+ Signaling Machinery in Early Animal and Fungal Evolution

PubMed Central

Cai, Xinjiang; Clapham, David E.

2012-01-01

Animals and fungi diverged from a common unicellular ancestor of Opisthokonta, yet they exhibit significant differences in their components of Ca2+ signaling pathways. Many Ca2+ signaling molecules appear to be either animal-specific or fungal-specific, which is generally believed to result from lineage-specific adaptations to distinct physiological requirements. Here, by analyzing the genomic data from several close relatives of animals and fungi, we demonstrate that many components of animal and fungal Ca2+ signaling machineries are present in the apusozoan protist Thecamonas trahens, which belongs to the putative unicellular sister group to Opisthokonta. We also identify the conserved portion of Ca2+ signaling molecules in early evolution of animals and fungi following their divergence. Furthermore, our results reveal the lineage-specific expansion of Ca2+ channels and transporters in the unicellular ancestors of animals and in basal fungi. These findings provide novel insights into the evolution and regulation of Ca2+ signaling critical for animal and fungal biology. PMID:21680871

Undecidability of the spectral gap.

PubMed

Cubitt, Toby S; Perez-Garcia, David; Wolf, Michael M

2015-12-10

The spectral gap--the energy difference between the ground state and first excited state of a system--is central to quantum many-body physics. Many challenging open problems, such as the Haldane conjecture, the question of the existence of gapped topological spin liquid phases, and the Yang-Mills gap conjecture, concern spectral gaps. These and other problems are particular cases of the general spectral gap problem: given the Hamiltonian of a quantum many-body system, is it gapped or gapless? Here we prove that this is an undecidable problem. Specifically, we construct families of quantum spin systems on a two-dimensional lattice with translationally invariant, nearest-neighbour interactions, for which the spectral gap problem is undecidable. This result extends to undecidability of other low-energy properties, such as the existence of algebraically decaying ground-state correlations. The proof combines Hamiltonian complexity techniques with aperiodic tilings, to construct a Hamiltonian whose ground state encodes the evolution of a quantum phase-estimation algorithm followed by a universal Turing machine. The spectral gap depends on the outcome of the corresponding 'halting problem'. Our result implies that there exists no algorithm to determine whether an arbitrary model is gapped or gapless, and that there exist models for which the presence or absence of a spectral gap is independent of the axioms of mathematics.

Time evolution of the spectral break in the high-energy extra component of GRB 090926A

NASA Astrophysics Data System (ADS)

Yassine, M.; Piron, F.; Mochkovitch, R.; Daigne, F.

2017-10-01

Aims: The prompt light curve of the long GRB 090926A reveals a short pulse 10 s after the beginning of the burst emission, which has been observed by the Fermi observatory from the keV to the GeV energy domain. During this bright spike, the high-energy emission from GRB 090926A underwent a sudden hardening above 10 MeV in the form of an additional power-law component exhibiting a spectral attenuation at a few hundreds of MeV. This high-energy break has been previously interpreted in terms of gamma-ray opacity to pair creation and has been used to estimate the bulk Lorentz factor of the outflow. In this article, we report on a new time-resolved analysis of the GRB 090926A broadband spectrum during its prompt phase and on its interpretation in the framework of prompt emission models. Methods: We characterized the emission from GRB 090926A at the highest energies with Pass 8 data from the Fermi Large Area Telescope (LAT), which offer a greater sensitivity than any data set used in previous studies of this burst, particularly in the 30-100 MeV energy band. Then, we combined the LAT data with the Fermi Gamma-ray Burst Monitor (GBM) in joint spectral fits to characterize the time evolution of the broadband spectrum from keV to GeV energies. We paid careful attention to the systematic effects that arise from the uncertainties on the LAT response. Finally, we performed a temporal analysis of the light curves and we computed the variability timescales from keV to GeV energies during and after the bright spike. Results: Our analysis confirms and better constrains the spectral break, which has been previously reported during the bright spike. Furthermore, it reveals that the spectral attenuation persists at later times with an increase of the break characteristic energy up to the GeV domain until the end of the prompt phase. We discuss these results in terms of keV-MeV synchroton radiation of electrons accelerated during the dissipation of the jet energy and inverse Compton

Efficient solution of the Wigner-Liouville equation using a spectral decomposition of the force field

NASA Astrophysics Data System (ADS)

Van de Put, Maarten L.; Sorée, Bart; Magnus, Wim

2017-12-01

The Wigner-Liouville equation is reformulated using a spectral decomposition of the classical force field instead of the potential energy. The latter is shown to simplify the Wigner-Liouville kernel both conceptually and numerically as the spectral force Wigner-Liouville equation avoids the numerical evaluation of the highly oscillatory Wigner kernel which is nonlocal in both position and momentum. The quantum mechanical evolution is instead governed by a term local in space and non-local in momentum, where the non-locality in momentum has only a limited range. An interpretation of the time evolution in terms of two processes is presented; a classical evolution under the influence of the averaged driving field, and a probability-preserving quantum-mechanical generation and annihilation term. Using the inherent stability and reduced complexity, a direct deterministic numerical implementation using Chebyshev and Fourier pseudo-spectral methods is detailed. For the purpose of illustration, we present results for the time-evolution of a one-dimensional resonant tunneling diode driven out of equilibrium.

Long-Term Spectral and Timing Behavior of the Black Hole Candidate XTE J1908+094

NASA Technical Reports Server (NTRS)

Gogus, Ersin; Finger, Mark H.; Kouveliotou, Chryssa; Woods, Peter M.; Patel, Sandeep K.; Ruppen, Michael; Swank, Jean H.; Markwardt, Craig B.; VanDerKlis, Michiel

2004-01-01

We present the long-term X-ray light curves and detailed spectral and timing analyses of XTE J1908+094 using the Rossi X-Ray Timing Explorer Proportional Counter Array observations covering two outbursts in 2002 and early 2003. At the onset of the first outburst, the source was found in a spectrally low/hard state lasting for approx.40 days, followed by a 3 day long transition to the high/soft state. The source flux (in 2- 10 keV) reached approx.100 mcrab on 2002 April 6, then decayed rapidly. In power spectra, we detect strong band-limited noise and varying low- frequency quasi-periodic oscillations that evolved from approx.0.5 to approx.5 Hz during the initial low/hard state of the source. We find that the second outburst closely resembled the spectral evolution of the first. The X-ray transient s overall outburst characteristics led us to classify XTE J1908+094 as a black hole candidate. Here we also derive precise X-ray position of the source using Chandra observations that were performed during the decay phase of the first outburst and following the second outburst.

Pristine Survey : High-Resolution Spectral Analyses of New Metal-poor Stars

NASA Astrophysics Data System (ADS)

Venn, Kim; Starkenburg, Else; Martin, Nicolas; Kielty, Collin; Youakim, Kris; Arnetsen, Anke

2018-06-01

The Pristine survey (Starkenburg et al. 2017) is a new and very successful metal-poor star survey. Combining high-quality narrow-band CaHK CFHT/MegaCam photometry with existing broadband photometry from SDSS, then very metal-poor stars have been found as confirmed from low-resolution spectroscopy (Youakim et al. 2017). Furthermore, we have extended this survey towards the Galactic bulge in a pilot program to test the capabilities in the highly crowded and (inhomogeneously) extincted bulge (Arentsen et al. 2018). High resolution spectral follow-up analyses have been initiated at the CFHT with Espadons (V<15) and the Gemini/GRACES long optical fibre that also feeds the Espadons spectrograph (15early and/or rapid Galactic chemical evolution or changes in the IMF, e.g., carbon enrichment, high [alpha/Fe] ratios vs alpha-challenged stars, and details in the neutron capture element ratios. While these early studies are being carried out using classical model atmospheres and synthetic spectral fitting (Venn et al. 2017, 2018), we are also exploring the use of a neural network for the fast, efficient, and precise determination of these stellar parameters and chemical abundances (e.g., StarNet, Fabbro et al. 2018).

The minimal kinome of Giardia lamblia illuminates early kinase evolution and unique parasite biology

PubMed Central

2011-01-01

Background The major human intestinal pathogen Giardia lamblia is a very early branching eukaryote with a minimal genome of broad evolutionary and biological interest. Results To explore early kinase evolution and regulation of Giardia biology, we cataloged the kinomes of three sequenced strains. Comparison with published kinomes and those of the excavates Trichomonas vaginalis and Leishmania major shows that Giardia's 80 core kinases constitute the smallest known core kinome of any eukaryote that can be grown in pure culture, reflecting both its early origin and secondary gene loss. Kinase losses in DNA repair, mitochondrial function, transcription, splicing, and stress response reflect this reduced genome, while the presence of other kinases helps define the kinome of the last common eukaryotic ancestor. Immunofluorescence analysis shows abundant phospho-staining in trophozoites, with phosphotyrosine abundant in the nuclei and phosphothreonine and phosphoserine in distinct cytoskeletal organelles. The Nek kinase family has been massively expanded, accounting for 198 of the 278 protein kinases in Giardia. Most Neks are catalytically inactive, have very divergent sequences and undergo extensive duplication and loss between strains. Many Neks are highly induced during development. We localized four catalytically active Neks to distinct parts of the cytoskeleton and one inactive Nek to the cytoplasm. Conclusions The reduced kinome of Giardia sheds new light on early kinase evolution, and its highly divergent sequences add to the definition of individual kinase families as well as offering specific drug targets. Giardia's massive Nek expansion may reflect its distinctive lifestyle, biphasic life cycle and complex cytoskeleton. PMID:21787419

Spectral distortions of the cosmic microwave background

NASA Technical Reports Server (NTRS)

Adams, Fred C.; Mcdowell, Jonathan C.; Freese, Katherine; Levin, Janna

1989-01-01

Recent experiments indicate that the spectrum of the cosmic microwave background deviates from a pure blackbody; here, spectral distortions produced by cosmic dust are considered. The main result is that cosmic dust in conjunction with an injected radiation field (perhaps produced by an early generation of very massive stars) can explain the observed spectral distortions without violating existing cosmological constraints. In addition, it is shown that Compton y-distortions can also explain the observed spectral shape, but the energetic requirements are more severe.

Bar Evolution and Bar Properties from Disc Galaxies in the Early Universe

NASA Astrophysics Data System (ADS)

Hutchinson-Smith, Tenley; Simmons, Brooke

2017-01-01

Bars in disc galaxies indicate a large collection of stars in a specific configuration of orbits that give the galaxy center a rectangular looking feature. Astronomers have discovered that these bars affect the distribution of matter in galaxies, and are also related to galaxy stellar mass and star formation history. Little is known about the specifics of how bars evolve and drive the evolution of their host galaxies because only a handful of bars have been studied in detail so far. I have examined a sample of 8,221 barred galaxies from the early universe to identify and examine correlations with galaxy properties. The data comes from Galaxy Zoo, an online citizen science project that allows anyone to classify and measure detailed properties of galaxies. I present results including the fraction of galaxies in the sample that have bars, and the variation of galaxy properties with bar length, including galaxy color and stellar mass. I also compare these results to barred galaxies in the local universe. I will discuss the implications of these results in the context of galaxy evolution overall, including the effect of dark matter on bars and galaxy evolution.

Early-state damage detection, characterization, and evolution using high-resolution computed tomography

NASA Astrophysics Data System (ADS)

Grandin, Robert John

Safely using materials in high performance applications requires adequately understanding the mechanisms which control the nucleation and evolution of damage. Most of a material's operational life is spent in a state with noncritical damage, and, for example in metals only a small portion of its life falls within the classical Paris Law regime of crack growth. Developing proper structural health and prognosis models requires understanding the behavior of damage in these early stages within the material's life, and this early-stage damage occurs on length scales at which the material may be considered "granular'' in the sense that the discrete regions which comprise the whole are large enough to require special consideration. Material performance depends upon the characteristics of the granules themselves as well as the interfaces between granules. As a result, properly studying early-stage damage in complex, granular materials requires a means to characterize changes in the granules and interfaces. The granular-scale can range from tenths of microns in ceramics, to single microns in fiber-reinforced composites, to tens of millimeters in concrete. The difficulty of direct-study is often overcome by exhaustive testing of macro-scale damage caused by gross material loads and abuse. Such testing, for example optical or electron microscopy, destructive and further, is costly when used to study the evolution of damage within a material and often limits the study to a few snapshots. New developments in high-resolution computed tomography (HRCT) provide the necessary spatial resolution to directly image the granule length-scale of many materials. Successful application of HRCT with fiber-reinforced composites, however, requires extending the HRCT performance beyond current limits. This dissertation will discuss improvements made in the field of CT reconstruction which enable resolutions to be pushed to the point of being able to image the fiber-scale damage structures and

NGEE Arctic Canopy Spectral Reflectance, Barrow, Alaska, 2014-2016

DOE Office of Scientific and Technical Information (OSTI.GOV)

Shawn Serbin; Wil Lieberman-Cribbin; Kim Ely

Measurements of full-spectrum (i.e. 350-2500nm) canopy spectral reflectance of Arctic plant species within the BEO, Barrow, Alaska. Spectra were collected using an Spectra Vista Corporation (SVC) HR-2014i and Spectral Evolution (SE) PSR+ instrument mounted on a tripod or monopod together with a Spectralon white plate to calibrate each measurement under variable illumination conditions. Data were collected in Barrow, Alaska during the 2014 to 2016 period.

Constraining Galaxy Evolution With Hubble's Next Generation Spectral Library

NASA Astrophysics Data System (ADS)

Heap, S.; Lindler, D. J.

2009-03-01

We present Hubble's Next Generation Spectral Library, a library of UV-optical spectra (0.2-1.0 μ) of 378 stars. We show that the mid-UV spectrum can be used to constrain the ages and metallicities of high-redshift galaxies presently being observed with large, ground-based telescopes.

Phylogenetic ctDNA analysis depicts early stage lung cancer evolution

PubMed Central

Abbosh, Christopher; Birkbak, Nicolai J.; Wilson, Gareth A.; Jamal-Hanjani, Mariam; Constantin, Tudor; Salari, Raheleh; Le Quesne, John; Moore, David A; Veeriah, Selvaraju; Rosenthal, Rachel; Marafioti, Teresa; Kirkizlar, Eser; Watkins, Thomas B K; McGranahan, Nicholas; Ward, Sophia; Martinson, Luke; Riley, Joan; Fraioli, Francesco; Al Bakir, Maise; Grönroos, Eva; Zambrana, Francisco; Endozo, Raymondo; Bi, Wenya Linda; Fennessy, Fiona M.; Sponer, Nicole; Johnson, Diana; Laycock, Joanne; Shafi, Seema; Czyzewska-Khan, Justyna; Rowan, Andrew; Chambers, Tim; Matthews, Nik; Turajlic, Samra; Hiley, Crispin; Lee, Siow Ming; Forster, Martin D.; Ahmad, Tanya; Falzon, Mary; Borg, Elaine; Lawrence, David; Hayward, Martin; Kolvekar, Shyam; Panagiotopoulos, Nikolaos; Janes, Sam M; Thakrar, Ricky; Ahmed, Asia; Blackhall, Fiona; Summers, Yvonne; Hafez, Dina; Naik, Ashwini; Ganguly, Apratim; Kareht, Stephanie; Shah, Rajesh; Joseph, Leena; Quinn, Anne Marie; Crosbie, Phil; Naidu, Babu; Middleton, Gary; Langman, Gerald; Trotter, Simon; Nicolson, Marianne; Remmen, Hardy; Kerr, Keith; Chetty, Mahendran; Gomersall, Lesley; Fennell, Dean; Nakas, Apostolos; Rathinam, Sridhar; Anand, Girija; Khan, Sajid; Russell, Peter; Ezhil, Veni; Ismail, Babikir; Irvin-sellers, Melanie; Prakash, Vineet; Lester, Jason; Kornaszewska, Malgorzata; Attanoos, Richard; Adams, Haydn; Davies, Helen; Oukrif, Dahmane; Akarca, Ayse U; Hartley, John A; Lowe, Helen L; Lock, Sara; Iles, Natasha; Bell, Harriet; Ngai, Yenting; Elgar, Greg; Szallasi, Zoltan; Schwarz, Roland F; Herrero, Javier; Stewart, Aengus; Quezada, Sergio A; Peggs, Karl S.; Van Loo, Peter; Dive, Caroline; Lin, Jimmy; Rabinowitz, Matthew; Aerts, Hugo JWL; Hackshaw, Allan; Shaw, Jacqui A; Zimmermann, Bernhard G.; Swanton, Charles

2017-01-01

Summary The early detection of relapse following primary surgery for non-small cell lung cancer and the characterization of emerging subclones seeding metastatic sites might offer new therapeutic approaches to limit tumor recurrence. The potential to non-invasively track tumor evolutionary dynamics in ctDNA of early-stage lung cancer is not established. Here we conduct a tumour-specific phylogenetic approach to ctDNA profiling in the first 100 TRACERx (TRAcking non-small cell lung Cancer Evolution through therapy (Rx)) study participants, including one patient co-recruited to the PEACE (Posthumous Evaluation of Advanced Cancer Environment) post-mortem study. We identify independent predictors of ctDNA release and perform tumor volume limit of detection analyses. Through blinded profiling of post-operative plasma, we observe evidence of adjuvant chemotherapy resistance and identify patients destined to experience recurrence of their lung cancer. Finally, we show that phylogenetic ctDNA profiling tracks the subclonal nature of lung cancer relapse and metastases, providing a new approach for ctDNA driven therapeutic studies PMID:28445469

Phylogenetic ctDNA analysis depicts early-stage lung cancer evolution.

PubMed

Abbosh, Christopher; Birkbak, Nicolai J; Wilson, Gareth A; Jamal-Hanjani, Mariam; Constantin, Tudor; Salari, Raheleh; Le Quesne, John; Moore, David A; Veeriah, Selvaraju; Rosenthal, Rachel; Marafioti, Teresa; Kirkizlar, Eser; Watkins, Thomas B K; McGranahan, Nicholas; Ward, Sophia; Martinson, Luke; Riley, Joan; Fraioli, Francesco; Al Bakir, Maise; Grönroos, Eva; Zambrana, Francisco; Endozo, Raymondo; Bi, Wenya Linda; Fennessy, Fiona M; Sponer, Nicole; Johnson, Diana; Laycock, Joanne; Shafi, Seema; Czyzewska-Khan, Justyna; Rowan, Andrew; Chambers, Tim; Matthews, Nik; Turajlic, Samra; Hiley, Crispin; Lee, Siow Ming; Forster, Martin D; Ahmad, Tanya; Falzon, Mary; Borg, Elaine; Lawrence, David; Hayward, Martin; Kolvekar, Shyam; Panagiotopoulos, Nikolaos; Janes, Sam M; Thakrar, Ricky; Ahmed, Asia; Blackhall, Fiona; Summers, Yvonne; Hafez, Dina; Naik, Ashwini; Ganguly, Apratim; Kareht, Stephanie; Shah, Rajesh; Joseph, Leena; Marie Quinn, Anne; Crosbie, Phil A; Naidu, Babu; Middleton, Gary; Langman, Gerald; Trotter, Simon; Nicolson, Marianne; Remmen, Hardy; Kerr, Keith; Chetty, Mahendran; Gomersall, Lesley; Fennell, Dean A; Nakas, Apostolos; Rathinam, Sridhar; Anand, Girija; Khan, Sajid; Russell, Peter; Ezhil, Veni; Ismail, Babikir; Irvin-Sellers, Melanie; Prakash, Vineet; Lester, Jason F; Kornaszewska, Malgorzata; Attanoos, Richard; Adams, Haydn; Davies, Helen; Oukrif, Dahmane; Akarca, Ayse U; Hartley, John A; Lowe, Helen L; Lock, Sara; Iles, Natasha; Bell, Harriet; Ngai, Yenting; Elgar, Greg; Szallasi, Zoltan; Schwarz, Roland F; Herrero, Javier; Stewart, Aengus; Quezada, Sergio A; Peggs, Karl S; Van Loo, Peter; Dive, Caroline; Lin, C Jimmy; Rabinowitz, Matthew; Aerts, Hugo J W L; Hackshaw, Allan; Shaw, Jacqui A; Zimmermann, Bernhard G; Swanton, Charles

2017-04-26

The early detection of relapse following primary surgery for non-small-cell lung cancer and the characterization of emerging subclones, which seed metastatic sites, might offer new therapeutic approaches for limiting tumour recurrence. The ability to track the evolutionary dynamics of early-stage lung cancer non-invasively in circulating tumour DNA (ctDNA) has not yet been demonstrated. Here we use a tumour-specific phylogenetic approach to profile the ctDNA of the first 100 TRACERx (Tracking Non-Small-Cell Lung Cancer Evolution Through Therapy (Rx)) study participants, including one patient who was also recruited to the PEACE (Posthumous Evaluation of Advanced Cancer Environment) post-mortem study. We identify independent predictors of ctDNA release and analyse the tumour-volume detection limit. Through blinded profiling of postoperative plasma, we observe evidence of adjuvant chemotherapy resistance and identify patients who are very likely to experience recurrence of their lung cancer. Finally, we show that phylogenetic ctDNA profiling tracks the subclonal nature of lung cancer relapse and metastasis, providing a new approach for ctDNA-driven therapeutic studies.

Chloroplast Genome Evolution in Early Diverged Leptosporangiate Ferns

PubMed Central

Kim, Hyoung Tae; Chung, Myong Gi; Kim, Ki-Joong

2014-01-01

In this study, the chloroplast (cp) genome sequences from three early diverged leptosporangiate ferns were completed and analyzed in order to understand the evolution of the genome of the fern lineages. The complete cp genome sequence of Osmunda cinnamomea (Osmundales) was 142,812 base pairs (bp). The cp genome structure was similar to that of eusporangiate ferns. The gene/intron losses that frequently occurred in the cp genome of leptosporangiate ferns were not found in the cp genome of O. cinnamomea. In addition, putative RNA editing sites in the cp genome were rare in O. cinnamomea, even though the sites were frequently predicted to be present in leptosporangiate ferns. The complete cp genome sequence of Diplopterygium glaucum (Gleicheniales) was 151,007 bp and has a 9.7 kb inversion between the trnL-CAA and trnV-GCA genes when compared to O. cinnamomea. Several repeated sequences were detected around the inversion break points. The complete cp genome sequence of Lygodium japonicum (Schizaeales) was 157,142 bp and a deletion of the rpoC1 intron was detected. This intron loss was shared by all of the studied species of the genus Lygodium. The GC contents and the effective numbers of co-dons (ENCs) in ferns varied significantly when compared to seed plants. The ENC values of the early diverged leptosporangiate ferns showed intermediate levels between eusporangiate and core leptosporangiate ferns. However, our phylogenetic tree based on all of the cp gene sequences clearly indicated that the cp genome similarity between O. cinnamomea (Osmundales) and eusporangiate ferns are symplesiomorphies, rather than synapomorphies. Therefore, our data is in agreement with the view that Osmundales is a distinct early diverged lineage in the leptosporangiate ferns. PMID:24823358

Chloroplast genome evolution in early diverged leptosporangiate ferns.

PubMed

Kim, Hyoung Tae; Chung, Myong Gi; Kim, Ki-Joong

2014-05-01

In this study, the chloroplast (cp) genome sequences from three early diverged leptosporangiate ferns were completed and analyzed in order to understand the evolution of the genome of the fern lineages. The complete cp genome sequence of Osmunda cinnamomea (Osmundales) was 142,812 base pairs (bp). The cp genome structure was similar to that of eusporangiate ferns. The gene/intron losses that frequently occurred in the cp genome of leptosporangiate ferns were not found in the cp genome of O. cinnamomea. In addition, putative RNA editing sites in the cp genome were rare in O. cinnamomea, even though the sites were frequently predicted to be present in leptosporangiate ferns. The complete cp genome sequence of Diplopterygium glaucum (Gleicheniales) was 151,007 bp and has a 9.7 kb inversion between the trnL-CAA and trnVGCA genes when compared to O. cinnamomea. Several repeated sequences were detected around the inversion break points. The complete cp genome sequence of Lygodium japonicum (Schizaeales) was 157,142 bp and a deletion of the rpoC1 intron was detected. This intron loss was shared by all of the studied species of the genus Lygodium. The GC contents and the effective numbers of codons (ENCs) in ferns varied significantly when compared to seed plants. The ENC values of the early diverged leptosporangiate ferns showed intermediate levels between eusporangiate and core leptosporangiate ferns. However, our phylogenetic tree based on all of the cp gene sequences clearly indicated that the cp genome similarity between O. cinnamomea (Osmundales) and eusporangiate ferns are symplesiomorphies, rather than synapomorphies. Therefore, our data is in agreement with the view that Osmundales is a distinct early diverged lineage in the leptosporangiate ferns.

The emergence and early evolution of biological carbon-fixation.

PubMed

Braakman, Rogier; Smith, Eric

2012-01-01

The fixation of CO₂ into living matter sustains all life on Earth, and embeds the biosphere within geochemistry. The six known chemical pathways used by extant organisms for this function are recognized to have overlaps, but their evolution is incompletely understood. Here we reconstruct the complete early evolutionary history of biological carbon-fixation, relating all modern pathways to a single ancestral form. We find that innovations in carbon-fixation were the foundation for most major early divergences in the tree of life. These findings are based on a novel method that fully integrates metabolic and phylogenetic constraints. Comparing gene-profiles across the metabolic cores of deep-branching organisms and requiring that they are capable of synthesizing all their biomass components leads to the surprising conclusion that the most common form for deep-branching autotrophic carbon-fixation combines two disconnected sub-networks, each supplying carbon to distinct biomass components. One of these is a linear folate-based pathway of CO₂ reduction previously only recognized as a fixation route in the complete Wood-Ljungdahl pathway, but which more generally may exclude the final step of synthesizing acetyl-CoA. Using metabolic constraints we then reconstruct a "phylometabolic" tree with a high degree of parsimony that traces the evolution of complete carbon-fixation pathways, and has a clear structure down to the root. This tree requires few instances of lateral gene transfer or convergence, and instead suggests a simple evolutionary dynamic in which all divergences have primary environmental causes. Energy optimization and oxygen toxicity are the two strongest forces of selection. The root of this tree combines the reductive citric acid cycle and the Wood-Ljungdahl pathway into a single connected network. This linked network lacks the selective optimization of modern fixation pathways but its redundancy leads to a more robust topology, making it more

Automated spectral classification and the GAIA project

NASA Technical Reports Server (NTRS)

Lasala, Jerry; Kurtz, Michael J.

1995-01-01

Two dimensional spectral types for each of the stars observed in the global astrometric interferometer for astrophysics (GAIA) mission would provide additional information for the galactic structure and stellar evolution studies, as well as helping in the identification of unusual objects and populations. The classification of the large quantity generated spectra requires that automated techniques are implemented. Approaches for the automatic classification are reviewed, and a metric-distance method is discussed. In tests, the metric-distance method produced spectral types with mean errors comparable to those of human classifiers working at similar resolution. Data and equipment requirements for an automated classification survey, are discussed. A program of auxiliary observations is proposed to yield spectral types and radial velocities for the GAIA-observed stars.

Firework Model: Time Dependent Spectral Evolution of GRB

NASA Astrophysics Data System (ADS)

Barbiellini, Guido; Longo, Francesco; Ghirlanda, G.; Celotti, A.; Bosnjak, Z.

2004-09-01

The energetics of the long duration GRB phenomenon is compared with models of a rotating BH in a strong magnetic field generated by an accreting torus. The GRB energy emission is attributed to magnetic field vacuum breakdown that gives origin to a e +/- fireball. Its subsequent evolution is hypothesized in analogy with the in-flight decay of an elementary particle. An anisotropy in the fireball propagation is thus naturally produced. The recent discovery in some GRB of an initial phase characterized by a thermal spectrum could be interpreted as the photon emission of the fireball photosphere when it becomes transparent. In particular, the temporal evolution of the emission can be explained as the effect of a radiative deceleration of the out-moving ejecta.

Fossil scales illuminate the early evolution of lepidopterans and structural colors

PubMed Central

Zhang, Qingqing; Starkey, Timothy A.; McNamara, Maria E.; Jarzembowski, Edmund A.; Kelly, Richard; Ren, Xiaoyin; Chen, Jun; Zhang, Haichun

2018-01-01

Lepidopteran scales exhibit remarkably complex ultrastructures, many of which produce structural colors that are the basis for diverse communication strategies. Little is known, however, about the early evolution of lepidopteran scales and their photonic structures. We report scale architectures from Jurassic Lepidoptera from the United Kingdom, Germany, Kazakhstan, and China and from Tarachoptera (a stem group of Amphiesmenoptera) from mid-Cretaceous Burmese amber. The Jurassic lepidopterans exhibit a type 1 bilayer scale vestiture: an upper layer of large fused cover scales and a lower layer of small fused ground scales. This scale arrangement, plus preserved herringbone ornamentation on the cover scale surface, is almost identical to those of some extant Micropterigidae. Critically, the fossil scale ultrastructures have periodicities measuring from 140 to 2000 nm and are therefore capable of scattering visible light, providing the earliest evidence of structural colors in the insect fossil record. Optical modeling confirms that diffraction-related scattering mechanisms dominate the photonic properties of the fossil cover scales, which would have displayed broadband metallic hues as in numerous extant Micropterigidae. The fossil tarachopteran scales exhibit a unique suite of characteristics, including small size, elongate-spatulate shape, ridged ornamentation, and irregular arrangement, providing novel insight into the early evolution of lepidopteran scales. Combined, our results provide the earliest evidence for structural coloration in fossil lepidopterans and support the hypothesis that fused wing scales and the type 1 bilayer covering are groundplan features of the group. Wing scales likely had deep origins in earlier amphiesmenopteran lineages before the appearance of the Lepidoptera. PMID:29651455

Fossil scales illuminate the early evolution of lepidopterans and structural colors.

PubMed

Zhang, Qingqing; Mey, Wolfram; Ansorge, Jörg; Starkey, Timothy A; McDonald, Luke T; McNamara, Maria E; Jarzembowski, Edmund A; Wichard, Wilfried; Kelly, Richard; Ren, Xiaoyin; Chen, Jun; Zhang, Haichun; Wang, Bo

2018-04-01

Lepidopteran scales exhibit remarkably complex ultrastructures, many of which produce structural colors that are the basis for diverse communication strategies. Little is known, however, about the early evolution of lepidopteran scales and their photonic structures. We report scale architectures from Jurassic Lepidoptera from the United Kingdom, Germany, Kazakhstan, and China and from Tarachoptera (a stem group of Amphiesmenoptera) from mid-Cretaceous Burmese amber. The Jurassic lepidopterans exhibit a type 1 bilayer scale vestiture: an upper layer of large fused cover scales and a lower layer of small fused ground scales. This scale arrangement, plus preserved herringbone ornamentation on the cover scale surface, is almost identical to those of some extant Micropterigidae. Critically, the fossil scale ultrastructures have periodicities measuring from 140 to 2000 nm and are therefore capable of scattering visible light, providing the earliest evidence of structural colors in the insect fossil record. Optical modeling confirms that diffraction-related scattering mechanisms dominate the photonic properties of the fossil cover scales, which would have displayed broadband metallic hues as in numerous extant Micropterigidae. The fossil tarachopteran scales exhibit a unique suite of characteristics, including small size, elongate-spatulate shape, ridged ornamentation, and irregular arrangement, providing novel insight into the early evolution of lepidopteran scales. Combined, our results provide the earliest evidence for structural coloration in fossil lepidopterans and support the hypothesis that fused wing scales and the type 1 bilayer covering are groundplan features of the group. Wing scales likely had deep origins in earlier amphiesmenopteran lineages before the appearance of the Lepidoptera.

Early evolution of the venom system in lizards and snakes.

PubMed

Fry, Bryan G; Vidal, Nicolas; Norman, Janette A; Vonk, Freek J; Scheib, Holger; Ramjan, S F Ryan; Kuruppu, Sanjaya; Fung, Kim; Hedges, S Blair; Richardson, Michael K; Hodgson, Wayne C; Ignjatovic, Vera; Summerhayes, Robyn; Kochva, Elazar

2006-02-02

Among extant reptiles only two lineages are known to have evolved venom delivery systems, the advanced snakes and helodermatid lizards (Gila Monster and Beaded Lizard). Evolution of the venom system is thought to underlie the impressive radiation of the advanced snakes (2,500 of 3,000 snake species). In contrast, the lizard venom system is thought to be restricted to just two species and to have evolved independently from the snake venom system. Here we report the presence of venom toxins in two additional lizard lineages (Monitor Lizards and Iguania) and show that all lineages possessing toxin-secreting oral glands form a clade, demonstrating a single early origin of the venom system in lizards and snakes. Construction of gland complementary-DNA libraries and phylogenetic analysis of transcripts revealed that nine toxin types are shared between lizards and snakes. Toxinological analyses of venom components from the Lace Monitor Varanus varius showed potent effects on blood pressure and clotting ability, bioactivities associated with a rapid loss of consciousness and extensive bleeding in prey. The iguanian lizard Pogona barbata retains characteristics of the ancestral venom system, namely serial, lobular non-compound venom-secreting glands on both the upper and lower jaws, whereas the advanced snakes and anguimorph lizards (including Monitor Lizards, Gila Monster and Beaded Lizard) have more derived venom systems characterized by the loss of the mandibular (lower) or maxillary (upper) glands. Demonstration that the snakes, iguanians and anguimorphs form a single clade provides overwhelming support for a single, early origin of the venom system in lizards and snakes. These results provide new insights into the evolution of the venom system in squamate reptiles and open new avenues for biomedical research and drug design using hitherto unexplored venom proteins.

Spectral Analysis of the O(He)-Type Central Stars of the Planetary Nebulae K 1-27 and LoTr 4

NASA Technical Reports Server (NTRS)

Reindl, N.; Ringat, E.; Rauch, T.; Werner, K.; Kruk, J. W.

2011-01-01

The four known O(He) stars are the only amongst the hottest post-AGB stars whose atmospheres are composed of almost pure helium. Thus, their evolution deviates from the hydrogen-defiCient post-AGB evolutionary sequence of carbon-dominated stars like e.g. PG 1159 stars. The origin of the O(He) stars is still not explained. They might be either post-early AGB stars or the progeny of R Coronae Borealis stars. We present preliminary results of a non-LTE spectral analysis based on FUSE and HST/COS observations.

Evolution of domain walls in the early universe. Ph.D. Thesis - Chicago Univ.

NASA Technical Reports Server (NTRS)

Kawano, Lawrence

1989-01-01

The evolution of domain walls in the early universe is studied via 2-D computer simulation. The walls are initially configured on a triangular lattice and then released from the lattice, their evolution driven by wall curvature and by the universal expansion. The walls attain an average velocity of about 0.3c and their surface area per volume (as measured in comoving coordinates) goes down with a slope of -1 with respect to conformal time, regardless of whether the universe is matter or radiation dominated. The additional influence of vacuum pressure causes the energy density to fall away from this slope and steepen, thus allowing a situation in which domain walls can constitute a significant portion of the energy density of the universe without provoking an unacceptably large perturbation upon the microwave background.

Major transitions in the evolution of early land plants: a bryological perspective

PubMed Central

Ligrone, Roberto; Duckett, Jeffrey G.; Renzaglia, Karen S.

2012-01-01

Background Molecular phylogeny has resolved the liverworts as the earliest-divergent clade of land plants and mosses as the sister group to hornworts plus tracheophytes, with alternative topologies resolving the hornworts as sister to mosses plus tracheophytes less well supported. The tracheophytes plus fossil plants putatively lacking lignified vascular tissue form the polysporangiophyte clade. Scope This paper reviews phylogenetic, developmental, anatomical, genetic and paleontological data with the aim of reconstructing the succession of events that shaped major land plant lineages. Conclusions Fundamental land plant characters primarily evolved in the bryophyte grade, and hence the key to a better understanding of the early evolution of land plants is in bryophytes. The last common ancestor of land plants was probably a leafless axial gametophyte bearing simple unisporangiate sporophytes. Water-conducting tissue, if present, was restricted to the gametophyte and presumably consisted of perforate cells similar to those in the early-divergent bryophytes Haplomitrium and Takakia. Stomata were a sporophyte innovation with the possible ancestral functions of producing a transpiration-driven flow of water and solutes from the parental gametophyte and facilitating spore separation before release. Stomata in mosses, hornworts and polysporangiophytes are viewed as homologous, and hence these three lineages are collectively referred to as the ‘stomatophytes’. An indeterminate sporophyte body (the sporophyte shoot) developing from an apical meristem was the key innovation in polysporangiophytes. Poikilohydry is the ancestral condition in land plants; homoiohydry evolved in the sporophyte of polysporangiophytes. Fungal symbiotic associations ancestral to modern arbuscular mycorrhizas evolved in the gametophytic generation before the separation of major present-living lineages. Hydroids are imperforate water-conducting cells specific to advanced mosses. Xylem vascular

Leaf evolution in early-diverging ferns: insights from a new fern-like plant from the Late Devonian of China

PubMed Central

Wang, De-Ming; Xu, Hong-He; Xue, Jin-Zhuang; Wang, Qi; Liu, Le

2015-01-01

Background and Aims With the exception of angiosperms, the main euphyllophyte lineages (i.e. ferns sensu lato, progymnosperms and gymnosperms) had evolved laminate leaves by the Late Devonian. The evolution of laminate leaves, however, remains unclear for early-diverging ferns, largely represented by fern-like plants. This study presents a novel fern-like taxon with pinnules, which provides new insights into the early evolution of laminate leaves in early-diverging ferns. Methods Macrofossil specimens were collected from the Upper Devonian (Famennian) Wutong Formation of Anhui and Jiangsu Provinces, South China. A standard degagement technique was employed to uncover compressed plant portions within the rock matrix. Key Results A new fern-like taxon, Shougangia bella gen. et sp. nov., is described and represents an early-diverging fern with highly derived features. It has a partially creeping stem with adventitious roots only on one side, upright primary and secondary branches arranged in helices, tertiary branches borne alternately or (sub)oppositely, laminate and usually lobed leaves with divergent veins, and complex fertile organs terminating tertiary branches and possessing multiple divisions and numerous terminal sporangia. Conclusions Shougangia bella provides unequivocal fossil evidence for laminate leaves in early-diverging ferns. It suggests that fern-like plants, along with other euphyllophyte lineages, had independently evolved megaphylls by the Late Devonian, possibly in response to a significant decline in atmospheric CO2 concentration. Among fern-like plants, planate ultimate appendages are homologous with laminate pinnules, and in the evolution of megaphylls, fertile organs tend to become complex. PMID:25979918

Evolution of CO2 and H2O on Mars: A cold Early History?

NASA Technical Reports Server (NTRS)

Niles, P. B.; Michalski, J.

2011-01-01

The martian climate has long been thought to have evolved substantially through history from a warm and wet period to the current cold and dry conditions on the martian surface. This view has been challenged based primarily on evidence that the early Sun had a substantially reduced luminosity and that a greenhouse atmosphere would be difficult to sustain on Mars for long periods of time. In addition, the evidence for a warm, wet period of martian history is far from conclusive with many of the salient features capable of being explained by an early cold climate. An important test of the warm, wet early Mars hypothesis is the abundance of carbonates in the crust [1]. Recent high precision isotopic measurements of the martian atmosphere and discoveries of carbonates on the martian surface provide new constraints on the evolution of the martian atmosphere. This work seeks to apply these constraints to test the feasibility of the cold early scenario

The early ultraviolet, optical, and radio evolution of the soft X-ray transient GRO J0422+32

NASA Technical Reports Server (NTRS)

Shrader, C. R.; Wagner, R. Mark; Hjellming, R. M.; Han, X. H.; Starrfield, S. G.

1994-01-01

We have monitored the evolution of the transient X-ray source GRO J0422+32 from approximately 2 weeks postdiscovery into its early decline phase at ultraviolet, optical, and radio wavelengths. Optical and ultraviolet spectra exhibit numerous, but relatively weak, high-excitation emission lines such as those arising from He II, N III, N V, and C IV superposed on an intrinsically blue continuum. High-resolution optical spectroscopy reveals line profiles which are double peaked, and in the case of the higher order Balmer lines, superposed on a broad absorption profile. The early outburst optical-ultraviolet continuum energy distribution is well represented by a two power-law fit with a break at approximately equal 4000 A. Radio observations with the Very Large Array (VLA) reveal a flat-spectrum source, slowly increasing in intensity at the earliest epochs observed, followed by an approximate power-law decay light curve with an index of -1. Light curves for each wavelength domain are presented and discussed. Notable are the multiple secondary outbursts seen in the optical more than 1 year postdiscovery, and spectral changes associated with secondary rises seen in the radio and UV. We find that the ultraviolet and optical characteristics of GRO J0422+32 as well as its radio evolution, are similar to other recent well-observed soft X-ray transients (also called X-ray novae) such as Cen X-4, A0620-00 (V616 Mon), and Nova Muscae 1991 (GS 1124-683), suggesting that GRO J0422+32 is also a member of that subclass of low-mass X-ray binaries. We present definitive astrometric determination of the source position, and place an upper limit of R approximately equals 20 from our analysis of the Palomar Observatory Sky Survey (POSS). Additionally, we derive distinct values for color excess from analysis of the optical (E(B-V) = 0.23) and ultraviolet (E(B-V) = 0.4) data, suggesting an intrinsic magnitude of 19-19.5 for the progenitor if it is mid-K dwarf. This leads to a likely range

Study of Four Young TeV Pulsar Wind Nebulae with a Spectral Evolution Model

NASA Astrophysics Data System (ADS)

Tanaka, Shuta J.; Takahara, Fumio

2011-11-01

We study four young pulsar wind nebulae (PWNe) detected in TeV γ-rays, G21.5-0.9, G54.1+0.3, Kes 75, and G0.9+0.1, using the spectral evolution model developed and applied to the Crab Nebula in our previous work. We model the evolution of the magnetic field and the particle distribution function inside a uniformly expanding PWN considering a time-dependent injection from the pulsar and radiative and adiabatic losses. Considering uncertainties in the interstellar radiation field (ISRF) and their distance, we study two cases for each PWN. Because TeV PWNe have a large TeV γ-ray to X-ray flux ratio, the magnetic energy of the PWNe accounts for only a small fraction of the total energy injected (typically a few × 10-3). The γ-ray emission is dominated by inverse Compton scattering off the infrared photons of the ISRF. A broken power-law distribution function for the injected particles reproduces the observed spectrum well, except for G0.9+0.1. For G0.9+0.1, we do not need a low-energy counterpart because adiabatic losses alone are enough to reproduce the radio observations. High-energy power-law indices at injection are similar (2.5-2.6), while low-energy power-law indices range from 1.0 to 1.6. The lower limit of the particle injection rate indicates that the pair multiplicity is larger than 104. The corresponding upper limit of the bulk Lorentz factor of the pulsar winds is close to the break energy of the broken power-law injection, except for Kes 75. The initial rotational energy and the magnetic energy of the pulsars seem anticorrelated, although the statistics are poor.

Question 7: Comparative Genomics and Early Cell Evolution: A Cautionary Methodological Note

NASA Astrophysics Data System (ADS)

Islas, Sara; Hernández-Morales, Ricardo; Lazcano, Antonio

2007-10-01

Inventories of the gene content of the last common ancestor (LCA), i.e., the cenancestor, include sequences that may have undergone horizontal transfer events, as well as sequences that have originated in different pre-cenancestral epochs. However, the universal distribution of highly conserved genes involved in RNA metabolism provide insights into early stages of cell evolution during which RNA played a much more conspicuous biological role, and is consistent with the hypothesis that extant living systems were preceded by an RNA/protein world. Insights into the traits of primitive entities from which the LCA evolved may be derived from the analysis of paralogous gene families, including those formed by sequences that resulted from internal elongation events. Three major types of paralogous gene families can be recognized. The importance of this grouping for understanding the traits of early cells is discussed.

The Moon as a recorder of organic evolution in the early solar system: a lunar regolith analog study.

PubMed

Matthewman, Richard; Court, Richard W; Crawford, Ian A; Jones, Adrian P; Joy, Katherine H; Sephton, Mark A

2015-02-01

The organic record of Earth older than ∼3.8 Ga has been effectively erased. Some insight is provided to us by meteorites as well as remote and direct observations of asteroids and comets left over from the formation of the Solar System. These primitive objects provide a record of early chemical evolution and a sample of material that has been delivered to Earth's surface throughout the past 4.5 billion years. Yet an effective chronicle of organic evolution on all Solar System objects, including that on planetary surfaces, is more difficult to find. Fortunately, early Earth would not have been the only recipient of organic matter-containing objects in the early Solar System. For example, a recently proposed model suggests the possibility that volatiles, including organic material, remain archived in buried paleoregolith deposits intercalated with lava flows on the Moon. Where asteroids and comets allow the study of processes before planet formation, the lunar record could extend that chronicle to early biological evolution on the planets. In this study, we use selected free and polymeric organic materials to assess the hypothesis that organic matter can survive the effects of heating in the lunar regolith by overlying lava flows. Results indicate that the presence of lunar regolith simulant appears to promote polymerization and, therefore, preservation of organic matter. Once polymerized, the mineral-hosted newly formed organic network is relatively protected from further thermal degradation. Our findings reveal the thermal conditions under which preservation of organic matter on the Moon is viable.

Spectral models for early time SN 2011fe observations

NASA Astrophysics Data System (ADS)

Baron, E.; Hoeflich, P.; Friesen, Brian; Sullivan, M.; Hsiao, E.; Ellis, R. S.; Gal-Yam, A.; Howell, D. A.; Nugent, P. E.; Dominguez, I.; Krisciunas, K.; Phillips, M. M.; Suntzeff, N.; Wang, L.; Thomas, R. C.

2015-12-01

We use observed UV through near-IR spectra to examine whether SN 2011fe can be understood in the framework of Branch-normal Type Ia supernovae (SNe Ia) and to examine its individual peculiarities. As a benchmark, we use a delayed-detonation model with a progenitor metallicity of Z⊙/20. We study the sensitivity of features to variations in progenitor metallicity, the outer density profile, and the distribution of radioactive nickel. The effect of metallicity variations in the progenitor have a relatively small effect on the synthetic spectra. We also find that the abundance stratification of SN 2011fe resembles closely that of a delayed-detonation model with a transition density that has been fit to other Branch-normal SNe Ia. At early times, the model photosphere is formed in material with velocities that are too high, indicating that the photosphere recedes too slowly or that SN 2011fe has a lower specific energy in the outer ≈0.1 M⊙ than does the model. We discuss several explanations for the discrepancies. Finally, we examine variations in both the spectral energy distribution and in the colours due to variations in the progenitor metallicity, which suggests that colours are only weak indicators for the progenitor metallicity, in the particular explosion model that we have studied. We do find that the flux in the U band is significantly higher at maximum light in the solar metallicity model than in the lower metallicity model and the lower metallicity model much better matches the observed spectrum.

Spectral models for early time SN 2011fe observations

DOE PAGES

Baron, E.; Hoeflich, P.; Friesen, Brian; ...

2015-10-13

We use observed UV through near-IR spectra to examine whether SN 2011fe can be understood in the framework of Branch-normal Type Ia supernovae (SNe Ia) and to examine its individual peculiarities. As a benchmark, we use a delayed-detonationmodel with a progenitormetallicity of Z ⊙/20. We study the sensitivity of features to variations in progenitor metallicity, the outer density profile, and the distribution of radioactive nickel. The effect of metallicity variations in the progenitor have a relatively small effect on the synthetic spectra. We also find that the abundance stratification of SN 2011fe resembles closely that of a delayed-detonation model withmore » a transition density that has been fit to other Branch-normal SNe Ia. At early times, the model photosphere is formed in material with velocities that are too high, indicating that the photosphere recedes too slowly or that SN 2011fe has a lower specific energy in the outer ≈0.1 M ⊙ than does the model. We discuss several explanations for the discrepancies. Lastly, we examine variations in both the spectral energy distribution and in the colours due to variations in the progenitor metallicity, which suggests that colours are only weak indicators for the progenitor metallicity, in the particular explosion model that we have studied. Here we do find that the flux in the U band is significantly higher at maximum light in the solar metallicity model than in the lower metallicity model and the lower metallicity model much better matches the observed spectrum.« less

Ecological variation in South American geophagine cichlids arose during an early burst of adaptive morphological and functional evolution

PubMed Central

Arbour, Jessica Hilary; López-Fernández, Hernán

2013-01-01

Diversity and disparity are unequally distributed both phylogenetically and geographically. This uneven distribution may be owing to differences in diversification rates between clades resulting from processes such as adaptive radiation. We examined the rate and distribution of evolution in feeding biomechanics in the extremely diverse and continentally distributed South American geophagine cichlids. Evolutionary patterns in multivariate functional morphospace were examined using a phylomorphospace approach, disparity-through-time analyses and by comparing Brownian motion (BM) and adaptive peak evolutionary models using maximum likelihood. The most species-rich and functionally disparate clade (CAS) expanded more efficiently in morphospace and evolved more rapidly compared with both BM expectations and its sister clade (GGD). Members of the CAS clade also exhibited an early burst in functional evolution that corresponds to the development of modern ecological roles and may have been related to the colonization of a novel adaptive peak characterized by fast oral jaw mechanics. Furthermore, reduced ecological opportunity following this early burst may have restricted functional evolution in the GGD clade, which is less species-rich and more ecologically specialized. Patterns of evolution in ecologically important functional traits are consistent with a pattern of adaptive radiation within the most diverse clade of Geophagini. PMID:23740780

Novel scenarios of early animal evolution--is it time to rewrite textbooks?

PubMed

Dohrmann, Martin; Wörheide, Gert

2013-09-01

Understanding how important phenotypic, developmental, and genomic features of animals originated and evolved is essential for many fields of biological research, but such understanding depends on robust hypotheses about the phylogenetic interrelationships of the higher taxa to which the studied species belong. Molecular approaches to phylogenetics have proven able to revolutionize our knowledge of organismal evolution. However, with respect to the deepest splits in the metazoan Tree of Life-the relationships between Bilateria and the four non-bilaterian phyla (Porifera, Placozoa, Ctenophora, and Cnidaria)-no consensus has been reached yet, since a number of different, often contradictory, hypotheses with sometimes spectacular implications have been proposed in recent years. Here, we review the recent literature on the topic and contrast it with more classical perceptions based on analyses of morphological characters. We conclude that the time is not yet ripe to rewrite zoological textbooks and advocate a conservative approach when it comes to developing scenarios of the early evolution of animals.

Shining in the dark: the spectral evolution of the first black holes

NASA Astrophysics Data System (ADS)

Pacucci, Fabio; Ferrara, Andrea; Volonteri, Marta; Dubus, Guillaume

2015-12-01

Massive black hole (MBH) seeds at redshift z ≳ 10 are now thought to be key ingredients to explain the presence of the supermassive (109-10 M⊙) black holes in place <1 Gyr after the big bang. Once formed, massive seeds grow and emit copious amounts of radiation by accreting the left-over halo gas; their spectrum can then provide crucial information on their evolution. By combining radiation-hydrodynamic and spectral synthesis codes, we simulate the time-evolving spectrum emerging from the host halo of a MBH seed with initial mass 105 M⊙, assuming both standard Eddington-limited accretion, or slim accretion discs, appropriate for super-Eddington flows. The emission occurs predominantly in the observed infrared-submm (1-1000 μm) and X-ray (0.1-100 keV) bands. Such signal should be easily detectable by JWSTaround ˜ 1 μm up to z ˜ 25, and by ATHENA (between 0.1 and 10 keV, up to z ˜ 15). Ultra-deep X-ray surveys like the Chandra Deep Field South could have already detected these systems up to z ˜ 15. Based on this, we provide an upper limit for the z ≳ 6 MBH mass density of ρ• ≲ 2.5 × 102 M⊙ Mpc-3 assuming standard Eddington-limited accretion. If accretion occurs in the slim disc mode the limits are much weaker, ρ• ≲ 7.6 × 103 M⊙ Mpc-3 in the most constraining case.

Origin and early evolution of photosynthetic eukaryotes in freshwater environments: reinterpreting proterozoic paleobiology and biogeochemical processes in light of trait evolution.

PubMed

Blank, Carrine E

2013-12-01

Phylogenetic analyses were performed on concatenated data sets of 31 genes and 11,789 unambiguously alignable characters from 37 cyanobacterial and 35 chloroplast genomes. The plastid lineage emerged somewhat early in the cyanobacterial tree, at a time when Cyanobacteria were likely unicellular and restricted to freshwater ecosystems. Using relaxed molecular clocks and 22 age constraints spanning cyanobacterial and eukaryote nodes, the common ancestor to the photosynthetic eukaryotes was predicted to have also inhabited freshwater environments around the time that oxygen appeared in the atmosphere (2.0-2.3 Ga). Early diversifications within each of the three major plastid clades were also inferred to have occurred in freshwater environments, through the late Paleoproterozoic and into the middle Mesoproterozoic. The colonization of marine environments by photosynthetic eukaryotes may not have occurred until after the middle Mesoproterozoic (1.2-1.5 Ga). The evolutionary hypotheses proposed here predict that early photosynthetic eukaryotes may have never experienced the widespread anoxia or euxinia suggested to have characterized marine environments in the Paleoproterozoic to early Mesoproterozoic. It also proposes that earliest acritarchs (1.5-1.7 Ga) may have been produced by freshwater taxa. This study highlights how the early evolution of habitat preference in photosynthetic eukaryotes, along with Cyanobacteria, could have contributed to changing biogeochemical conditions on the early Earth. © 2013 Phycological Society of America.

Leaf evolution in early-diverging ferns: insights from a new fern-like plant from the Late Devonian of China.

PubMed

Wang, De-Ming; Xu, Hong-He; Xue, Jin-Zhuang; Wang, Qi; Liu, Le

2015-06-01

With the exception of angiosperms, the main euphyllophyte lineages (i.e. ferns sensu lato, progymnosperms and gymnosperms) had evolved laminate leaves by the Late Devonian. The evolution of laminate leaves, however, remains unclear for early-diverging ferns, largely represented by fern-like plants. This study presents a novel fern-like taxon with pinnules, which provides new insights into the early evolution of laminate leaves in early-diverging ferns. Macrofossil specimens were collected from the Upper Devonian (Famennian) Wutong Formation of Anhui and Jiangsu Provinces, South China. A standard degagement technique was employed to uncover compressed plant portions within the rock matrix. A new fern-like taxon, SHOUGANGIA BELLA GEN ET SP NOV: , is described and represents an early-diverging fern with highly derived features. It has a partially creeping stem with adventitious roots only on one side, upright primary and secondary branches arranged in helices, tertiary branches borne alternately or (sub)oppositely, laminate and usually lobed leaves with divergent veins, and complex fertile organs terminating tertiary branches and possessing multiple divisions and numerous terminal sporangia. Shougangia bella provides unequivocal fossil evidence for laminate leaves in early-diverging ferns. It suggests that fern-like plants, along with other euphyllophyte lineages, had independently evolved megaphylls by the Late Devonian, possibly in response to a significant decline in atmospheric CO2 concentration. Among fern-like plants, planate ultimate appendages are homologous with laminate pinnules, and in the evolution of megaphylls, fertile organs tend to become complex. © The Author 2015. Published by Oxford University Press on behalf of the Annals of Botany Company. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

Extracting attosecond delays from spectrally overlapping interferograms

NASA Astrophysics Data System (ADS)

Jordan, Inga; Wörner, Hans Jakob

2018-02-01

Attosecond interferometry is becoming an increasingly popular technique for measuring the dynamics of photoionization in real time. Whereas early measurements focused on atomic systems with very simple photoelectron spectra, the technique is now being applied to more complex systems including isolated molecules and solids. The increase in complexity translates into an augmented spectral congestion, unavoidably resulting in spectral overlap in attosecond interferograms. Here, we discuss currently used methods for phase retrieval and introduce two new approaches for determining attosecond photoemission delays from spectrally overlapping photoelectron spectra. We show that the previously used technique, consisting in the spectral integration of the areas of interest, does in general not provide reliable results. Our methods resolve this problem, thereby opening the technique of attosecond interferometry to complex systems and fully exploiting its specific advantages in terms of spectral resolution compared to attosecond streaking.

Merger-driven evolution of the effective stellar initial mass function of massive early-type galaxies

NASA Astrophysics Data System (ADS)

Sonnenfeld, Alessandro; Nipoti, Carlo; Treu, Tommaso

2017-02-01

The stellar initial mass function (IMF) of early-type galaxies is the combination of the IMF of the stellar population formed in situ and that of accreted stellar populations. Using as an observable the effective IMF αIMF, defined as the ratio between the true stellar mass of a galaxy and the stellar mass inferred assuming a Salpeter IMF, we present a theoretical model for its evolution as a result of dry mergers. We use a simple dry-merger evolution model, based on cosmological N-body simulations, together with empirically motivated prescriptions for the IMF to make predictions on how the effective IMF of massive early-type galaxies changes from z = 2 to z = 0. We find that the IMF normalization of individual galaxies becomes lighter with time. At fixed velocity dispersion, αIMF is predicted to be constant with redshift. Current dynamical constraints on the evolution of the IMF are in slight tension with this prediction, even though systematic uncertainties, including the effect of radial gradients in the IMF, prevent a conclusive statement. The correlation of αIMF with stellar mass becomes shallower with time, while the correlation between αIMF and velocity dispersion is mostly preserved by dry mergers. We also find that dry mergers can mix the dependence of the IMF on stellar mass and velocity dispersion, making it challenging to infer, from z = 0 observations of global galactic properties, what is the quantity that is originally coupled with the IMF.

Lunge feeding in early marine reptiles and fast evolution of marine tetrapod feeding guilds.

PubMed

Motani, Ryosuke; Chen, Xiao-hong; Jiang, Da-yong; Cheng, Long; Tintori, Andrea; Rieppel, Olivier

2015-03-10

Traditional wisdom holds that biotic recovery from the end-Permian extinction was slow and gradual, and was not complete until the Middle Triassic. Here, we report that the evolution of marine predator feeding guilds, and their trophic structure, proceeded faster. Marine reptile lineages with unique feeding adaptations emerged during the Early Triassic (about 248 million years ago), including the enigmatic Hupehsuchus that possessed an unusually slender mandible. A new specimen of this genus reveals a well-preserved palate and mandible, which suggest that it was a rare lunge feeder as also occurs in rorqual whales and pelicans. The diversity of feeding strategies among Triassic marine tetrapods reached their peak in the Early Triassic, soon after their first appearance in the fossil record. The diet of these early marine tetrapods most likely included soft-bodied animals that are not preserved as fossils. Early marine tetrapods most likely introduced a new trophic mechanism to redistribute nutrients to the top 10 m of the sea, where the primary productivity is highest. Therefore, a simple recovery to a Permian-like trophic structure does not explain the biotic changes seen after the Early Triassic.

Lunge feeding in early marine reptiles and fast evolution of marine tetrapod feeding guilds

PubMed Central

Motani, Ryosuke; Chen, Xiao-hong; Jiang, Da-yong; Cheng, Long; Tintori, Andrea; Rieppel, Olivier

2015-01-01

Traditional wisdom holds that biotic recovery from the end-Permian extinction was slow and gradual, and was not complete until the Middle Triassic. Here, we report that the evolution of marine predator feeding guilds, and their trophic structure, proceeded faster. Marine reptile lineages with unique feeding adaptations emerged during the Early Triassic (about 248 million years ago), including the enigmatic Hupehsuchus that possessed an unusually slender mandible. A new specimen of this genus reveals a well-preserved palate and mandible, which suggest that it was a rare lunge feeder as also occurs in rorqual whales and pelicans. The diversity of feeding strategies among Triassic marine tetrapods reached their peak in the Early Triassic, soon after their first appearance in the fossil record. The diet of these early marine tetrapods most likely included soft-bodied animals that are not preserved as fossils. Early marine tetrapods most likely introduced a new trophic mechanism to redistribute nutrients to the top 10 m of the sea, where the primary productivity is highest. Therefore, a simple recovery to a Permian-like trophic structure does not explain the biotic changes seen after the Early Triassic. PMID:25754468

Spectral identification of abiotic O2 buildup from early runaways and rarefied atmospheres

NASA Astrophysics Data System (ADS)

Schwieterman, Edward; Meadows, Victoria; Domagal-Goldman, Shawn; Arney, Giada; Robinson, Tyler D.; Luger, Rodrigo; Barnes, Rory

2016-01-01

The spectral detection of oxygen (O2) in a planetary atmosphere has been considered a robust signature of life because O2 is highly reactive on planets with Earth-like redox buffers and because significant continuous abiotic sources were thought to be implausible. However, recent work has revealed the possibility that significant O2 may build-up in terrestrial atmospheres through (1) photochemical channels or (2) through the escape of hydrogen. We focus on the latter category here. Significant amounts of abiotic O2 could remain in the atmospheres of planets in the habitable zones of late type stars, where an early runaway greenhouse and massive hydrogen escape during the pre-main-sequence phase could have irreversibly oxidized the crust and mantle (Luger & Barnes 2015). Additionally, it has been hypothesized that O2 could accumulate in the atmospheres of planets with sufficiently low abundances of non-condensable gases such as N2 where water would not be cold trapped in the troposphere, leading to H-escape from UV photolysis in a wet stratosphere (Wordsworth & Pierrehumbert 2014). We self-consistently model the climate, photochemistry, and spectra of both rarefied and post-runaway, high-O2 atmospheres. Because an early runaway might not have lasted long enough for the entire water inventory to escape, we explore both completely desiccated scenarios and cases where a surface ocean remains. We find "habitable" surface conditions for a wide variety of oxygen abundances, atmospheric masses, and CO2 mixing ratios. If O2 builds up from massive or sustained H escape, the O2 abundance should be very high, and could be spectrally indicated by the presence of O2-O2 (O4) collisionally-induced absorption (CIA) features. We generate synthetic direct-imaging and transit transmission spectra of these atmospheres and calculate the strength of the UV/Visible and NIR O4 features. We find that while both the UV/Visible and NIR O4 features are strong in the radiance spectra of very

The Moon as a Recorder of Organic Evolution in the Early Solar System: A Lunar Regolith Analog Study

PubMed Central

Court, Richard W.; Crawford, Ian A.; Jones, Adrian P.; Joy, Katherine H.; Sephton, Mark A.

2015-01-01

Abstract The organic record of Earth older than ∼3.8 Ga has been effectively erased. Some insight is provided to us by meteorites as well as remote and direct observations of asteroids and comets left over from the formation of the Solar System. These primitive objects provide a record of early chemical evolution and a sample of material that has been delivered to Earth's surface throughout the past 4.5 billion years. Yet an effective chronicle of organic evolution on all Solar System objects, including that on planetary surfaces, is more difficult to find. Fortunately, early Earth would not have been the only recipient of organic matter–containing objects in the early Solar System. For example, a recently proposed model suggests the possibility that volatiles, including organic material, remain archived in buried paleoregolith deposits intercalated with lava flows on the Moon. Where asteroids and comets allow the study of processes before planet formation, the lunar record could extend that chronicle to early biological evolution on the planets. In this study, we use selected free and polymeric organic materials to assess the hypothesis that organic matter can survive the effects of heating in the lunar regolith by overlying lava flows. Results indicate that the presence of lunar regolith simulant appears to promote polymerization and, therefore, preservation of organic matter. Once polymerized, the mineral-hosted newly formed organic network is relatively protected from further thermal degradation. Our findings reveal the thermal conditions under which preservation of organic matter on the Moon is viable. Key Words: Moon—Regolith—Organic preservation—Biomarkers. Astrobiology 15, 154–168. PMID:25615648

Early chemo-dynamical evolution of dwarf galaxies deduced from enrichment of r-process elements

NASA Astrophysics Data System (ADS)

Hirai, Yutaka; Ishimaru, Yuhri; Saitoh, Takayuki R.; Fujii, Michiko S.; Hidaka, Jun; Kajino, Toshitaka

2017-04-01

The abundance of elements synthesized by the rapid neutron-capture process (r-process elements) of extremely metal-poor (EMP) stars in the Local Group galaxies gives us clues to clarify the early evolutionary history of the Milky Way halo. The Local Group dwarf galaxies would have similarly evolved with building blocks of the Milky Way halo. However, how the chemo-dynamical evolution of the building blocks affects the abundance of r-process elements is not yet clear. In this paper, we perform a series of simulations using dwarf galaxy models with various dynamical times and total mass, which determine star formation histories. We find that galaxies with dynamical times longer than 100 Myr have star formation rates less than 10-3 M⊙ yr-1 and slowly enrich metals in their early phase. These galaxies can explain the observed large scatters of r-process abundance in EMP stars in the Milky Way halo regardless of their total mass. On the other hand, the first neutron star merger appears at a higher metallicity in galaxies with a dynamical time shorter than typical neutron star merger times. The scatters of r-process elements mainly come from the inhomogeneity of the metals in the interstellar medium whereas the scatters of α-elements are mostly due to the difference in the yield of each supernova. Our results demonstrate that the future observations of r-process elements in EMP stars will be able to constrain the early chemo-dynamical evolution of the Local Group galaxies.

Early to Middle Jurassic tectonic evolution of the Bogda Mountains, Northwest China: Evidence from sedimentology and detrital zircon geochronology

NASA Astrophysics Data System (ADS)

Ji, Hongjie; Tao, Huifei; Wang, Qi; Qiu, Zhen; Ma, Dongxu; Qiu, Junli; Liao, Peng

2018-03-01

The Bogda Mountains, as an important intracontinental orogenic belt, are situated in the southern part of the Central Asian Orogenic Belt (CAOB), and are a key area for understanding the Mesozoic evolution of the CAOB. However, the tectonic evolution of the Bogda Mountains remains controversial during the Mesozoic Era, especially the Early to Middle Jurassic Periods. The successive Lower to Middle Jurassic strata are well preserved and exposed along the northern flank of the Western Bogda Mountains and record the uplift processes of the Bogda Mountains. In this study, we analysed sedimentary facies combined with detrital zircon U-Pb geochronology at five sections of Lower to Middle Jurassic strata to detect the tectonic evolution and changes of provenance in the Bogda area. During Early to Middle Jurassic times, the fluvial, deltaic and lacustrine environments dominated in the western section of the Bogda area. The existence of Early Triassic peak age indicates that the Bogda Mountains did not experience uplift during the period of early Badaowan Formation deposition. The Early Triassic to Late Permian granitoid plutons and Carboniferous volcanic rocks from the Barkol and Santanghu areas were the main provenances. The significant change in the U-Pb age spectrum implies that the Eastern Bogda Mountains initiated uplift in the period of late Badaowan Formation deposition, and the Eastern Junggar Basin and the Turpan-Hami Basin were partially partitioned. The Eastern Bogda Mountains gradually became the major provenance. From the period of early Sangonghe to early Toutunhe Formations deposition, the provenance of the sediments and basin-range frame were similar to that of late Badaowan. However, the Eastern Bogda Mountains suffered intermittent uplift three times, and successive denudation. The uplifts respectively happened in early Sangonghe, late Sangonghe to early Xishanyao, and late Xishanyao to early Toutunhe. During the deposition stage of Toutunhe Formation, a

The Moon Mineralogy (M3) Imaging Spectrometer: Early Assessment of the Spectral, Radiometric, Spatial and Uniformity Properties

NASA Technical Reports Server (NTRS)

Green, Robert O.; Pieters, C. M.; Boardman, J.; Barr, D.; Bruce, C.; Bousman, J.; Chatterjee, A.; Eastwood, M.; Essandoh, V.; Geier, S.;

Fuxianhuiid ventral nerve cord and early nervous system evolution in Panarthropoda.

PubMed

Yang, Jie; Ortega-Hernández, Javier; Butterfield, Nicholas J; Liu, Yu; Boyan, George S; Hou, Jin-Bo; Lan, Tian; Zhang, Xi-Guang

2016-03-15

Panarthropods are typified by disparate grades of neurological organization reflecting a complex evolutionary history. The fossil record offers a unique opportunity to reconstruct early character evolution of the nervous system via exceptional preservation in extinct representatives. Here we describe the neurological architecture of the ventral nerve cord (VNC) in the upper-stem group euarthropod Chengjiangocaris kunmingensis from the early Cambrian Xiaoshiba Lagerstätte (South China). The VNC of C. kunmingensis comprises a homonymous series of condensed ganglia that extend throughout the body, each associated with a pair of biramous limbs. Submillimetric preservation reveals numerous segmental and intersegmental nerve roots emerging from both sides of the VNC, which correspond topologically to the peripheral nerves of extant Priapulida and Onychophora. The fuxianhuiid VNC indicates that ancestral neurological features of Ecdysozoa persisted into derived members of stem-group Euarthropoda but were later lost in crown-group representatives. These findings illuminate the VNC ground pattern in Panarthropoda and suggest the independent secondary loss of cycloneuralian-like neurological characters in Tardigrada and Euarthropoda.

Fuxianhuiid ventral nerve cord and early nervous system evolution in Panarthropoda

PubMed Central

Yang, Jie; Ortega-Hernández, Javier; Butterfield, Nicholas J.; Liu, Yu; Boyan, George S.; Hou, Jin-bo; Lan, Tian; Zhang, Xi-guang

2016-01-01

Panarthropods are typified by disparate grades of neurological organization reflecting a complex evolutionary history. The fossil record offers a unique opportunity to reconstruct early character evolution of the nervous system via exceptional preservation in extinct representatives. Here we describe the neurological architecture of the ventral nerve cord (VNC) in the upper-stem group euarthropod Chengjiangocaris kunmingensis from the early Cambrian Xiaoshiba Lagerstätte (South China). The VNC of C. kunmingensis comprises a homonymous series of condensed ganglia that extend throughout the body, each associated with a pair of biramous limbs. Submillimetric preservation reveals numerous segmental and intersegmental nerve roots emerging from both sides of the VNC, which correspond topologically to the peripheral nerves of extant Priapulida and Onychophora. The fuxianhuiid VNC indicates that ancestral neurological features of Ecdysozoa persisted into derived members of stem-group Euarthropoda but were later lost in crown-group representatives. These findings illuminate the VNC ground pattern in Panarthropoda and suggest the independent secondary loss of cycloneuralian-like neurological characters in Tardigrada and Euarthropoda. PMID:26933218

A bizarre new toothed mysticete (Cetacea) from Australia and the early evolution of baleen whales.

PubMed

Fitzgerald, Erich M G

2006-12-07

Extant baleen whales (Cetacea, Mysticeti) are all large filter-feeding marine mammals that lack teeth as adults, instead possessing baleen, and feed on small marine animals in bulk. The early evolution of these superlative mammals, and their unique feeding method, has hitherto remained enigmatic. Here, I report a new toothed mysticete from the Late Oligocene of Australia that is more archaic than any previously described. Unlike all other mysticetes, this new whale was small, had enormous eyes and lacked derived adaptations for bulk filter-feeding. Several morphological features suggest that this mysticete was a macrophagous predator, being convergent on some Mesozoic marine reptiles and the extant leopard seal (Hydrurga leptonyx). It thus refutes the notions that all stem mysticetes were filter-feeders, and that the origins and initial radiation of mysticetes was linked to the evolution of filter-feeding. Mysticetes evidently radiated into a variety of disparate forms and feeding ecologies before the evolution of baleen or filter-feeding. The phylogenetic context of the new whale indicates that basal mysticetes were macrophagous predators that did not employ filter-feeding or echolocation, and that the evolution of characters associated with bulk filter-feeding was gradual.

A bizarre new toothed mysticete (Cetacea) from Australia and the early evolution of baleen whales

PubMed Central

Fitzgerald, Erich M.G

2006-01-01

Extant baleen whales (Cetacea, Mysticeti) are all large filter-feeding marine mammals that lack teeth as adults, instead possessing baleen, and feed on small marine animals in bulk. The early evolution of these superlative mammals, and their unique feeding method, has hitherto remained enigmatic. Here, I report a new toothed mysticete from the Late Oligocene of Australia that is more archaic than any previously described. Unlike all other mysticetes, this new whale was small, had enormous eyes and lacked derived adaptations for bulk filter-feeding. Several morphological features suggest that this mysticete was a macrophagous predator, being convergent on some Mesozoic marine reptiles and the extant leopard seal (Hydrurga leptonyx). It thus refutes the notions that all stem mysticetes were filter-feeders, and that the origins and initial radiation of mysticetes was linked to the evolution of filter-feeding. Mysticetes evidently radiated into a variety of disparate forms and feeding ecologies before the evolution of baleen or filter-feeding. The phylogenetic context of the new whale indicates that basal mysticetes were macrophagous predators that did not employ filter-feeding or echolocation, and that the evolution of characters associated with bulk filter-feeding was gradual. PMID:17015308

The Ca II V/R ratio and mass loss. [stellar spectral emission lines

NASA Technical Reports Server (NTRS)

Stencel, R. E.

1978-01-01

High-dispersion coude spectrograms of 181 MK standards of types early F through late M, including luminosity classes Ia, Ib, II, and III, are analyzed. It is shown that the brightness ratio of the V and R self-reversed emission peaks (denoted V/R) in the center of the Ca II K line is correlated with spectral type as well as with certain other spectral-type and luminosity-sensitive parameters, including indicators of mass loss and the H-K wing emission lines. The observations indicate that V/R varies smoothly from less than unity in late K and M giants to greater than unity for G giants. This trend appears to be true for bright giants as well but not necessarily for supergiants and seems to hold for the average V/R for a given star, although short-term variations in V/R occur. It is suggested that the V/R values, which can be interpreted in terms of atmospheric motions, may indirectly relate to effects of evolutionary changes in stellar structure and that V/R among late-type stars could be useful as an indicator of both chromospheric activity and the state of stellar evolution.

Transformation and diversification in early mammal evolution.

PubMed

Luo, Zhe-Xi

2007-12-13

Evolution of the earliest mammals shows successive episodes of diversification. Lineage-splitting in Mesozoic mammals is coupled with many independent evolutionary experiments and ecological specializations. Classic scenarios of mammalian morphological evolution tend to posit an orderly acquisition of key evolutionary innovations leading to adaptive diversification, but newly discovered fossils show that evolution of such key characters as the middle ear and the tribosphenic teeth is far more labile among Mesozoic mammals. Successive diversifications of Mesozoic mammal groups multiplied the opportunities for many dead-end lineages to iteratively evolve developmental homoplasies and convergent ecological specializations, parallel to those in modern mammal groups.

The Evolution of REM Sleep Behavior Disorder in Early Parkinson Disease

PubMed Central

Sixel-Döring, Friederike; Zimmermann, Johannes; Wegener, Andrea; Mollenhauer, Brit; Trenkwalder, Claudia

2016-01-01

Study Objectives: To investigate the development of REM sleep behavior disorder (RBD) and REM sleep behavioral events (RBE) not yet fulfilling diagnostic criteria for RBD as markers for neurodegeneration in a cohort of Parkinson disease (PD) patients between their de novo baseline assessment and two-year follow-up in comparison to healthy controls (HC). Methods: Clinically confirmed PD patients and HC with video-supported polysomnography (vPSG) data at baseline were re-investigated after two years. Diagnostic scoring for RBE and RBD was performed in both groups and related to baseline findings. Results: One hundred thirteen PD patients and 102 healthy controls (HC) were included in the study. Within two years, the overall occurrence of behaviors during REM sleep in PD patients increased from 50% to 63% (P = 0.02). RBD increased from 25% to 43% (P < 0.001). Eleven of 29 (38%) RBE positive PD patients and 10/56 (18%) patients with normal REM sleep at baseline converted to RBD. In HC, the occurrence of any REM behavior increased from 17% to 20% (n.s.). RBD increased from 2% to 4% (n.s.). One of 15 (7%) RBE positive HC and 1/85 (1%) HC with normal REM at baseline converted to RBD. Conclusions: RBD increased significantly in PD patients from the de novo state to two-year follow-up. We propose RBE being named “prodromal RBD” as it may follow a continuous evolution in PD possibly similar to the spreading of Lewy bodies in PD patients. RBD itself was shown as a robust and stable marker of early PD. Citation: Sixel-Döring F, Zimmermann J, Wegener A, Mollenhauer B, Trenkwalder C. The evolution of REM sleep behavior disorder in early Parkinson disease. SLEEP 2016;39(9):1737–1742. PMID:27306265

Revalidation of the genus Chiloguembelitria Hofker: Implications for the evolution of early Danian planktonic foraminifera

NASA Astrophysics Data System (ADS)

Arenillas, Ignacio; Arz, José A.; Gilabert, Vicente

2017-10-01

Guembelitria is the only planktonic foraminiferal genus whose survival from the mass extinction event of the Cretaceous/Paleogene (K/Pg) boundary has been clearly proven. The evolution of Guembelitria after the K/Pg boundary led to the appearance of two guembelitriid lineages in the early Danian: one biserial, represented by Woodringina and culminating in Chiloguembelina, and the other trochospiral, represented by Trochoguembelitria and culminating in Globoconusa. We have re-examined the genus Chiloguembelitria, another guembelitriid descended from Guembelitria and whose taxonomic validity had been questioned, it being considered a junior synonym of the latter. Nevertheless, Chiloguembelitria differs from Guembelitria mainly in the wall texture (pustulate to rugose vs. pore-mounded) and the position of the aperture (umbilical-extraumbilical to extraumbilical vs. umbilical). Chiloguembelitria shares its wall texture with Trochoguembelitria and some of the earliest specimens of Woodringina, suggesting that it played an important role in the evolution of early Danian guembelitriids, as it seems to be the most immediate ancestor of both trochospiral and biserial lineages. Morphological and morphostatistical analyses of Chiloguembelitria discriminate at least five species: Chg. danica, Chg. irregularis, and three new species: Chg. hofkeri, Chg. trilobata and Chg. biseriata.

S-154 in the Large Magellanic Cloud - Spectral evolution from a luminous Fe II variable to a symbiotic-like star

NASA Technical Reports Server (NTRS)

Remillard, R. A.; Rosenthal, E.; Tuohy, I. R.; Schwartz, D. A.; Buckley, D. A. H.; Brissenden, R. J. V.

1992-01-01

The evolution of the emission-line Star S-154, between February and December 1988, from a low-excitation 'Fe II star' into a high-excitation state that resembles symbiotic stars, is traced. It is inferred that the spectral type of central stars do not always dominate the physical conditions in the circumstellar material and thereby determine the nebular classification. The membership of S-154 in the LMC was confirmed with a radial velocity measurement of +274 km/s. The historical light curve (1880-1990) obtained from 346 photograph plates of the Harvard Plate Library exhibits about 4 mag of variations, with an MB range of -6 to -2. No evidence was found for coherent modulations that would represent the orbital period of a symbiotic binary.

Estimation of spectral kurtosis

NASA Astrophysics Data System (ADS)

Sutawanir

2017-03-01

Rolling bearings are the most important elements in rotating machinery. Bearing frequently fall out of service for various reasons: heavy loads, unsuitable lubrications, ineffective sealing. Bearing faults may cause a decrease in performance. Analysis of bearing vibration signals has attracted attention in the field of monitoring and fault diagnosis. Bearing vibration signals give rich information for early detection of bearing failures. Spectral kurtosis, SK, is a parameter in frequency domain indicating how the impulsiveness of a signal varies with frequency. Faults in rolling bearings give rise to a series of short impulse responses as the rolling elements strike faults, SK potentially useful for determining frequency bands dominated by bearing fault signals. SK can provide a measure of the distance of the analyzed bearings from a healthy one. SK provides additional information given by the power spectral density (psd). This paper aims to explore the estimation of spectral kurtosis using short time Fourier transform known as spectrogram. The estimation of SK is similar to the estimation of psd. The estimation falls in model-free estimation and plug-in estimator. Some numerical studies using simulations are discussed to support the methodology. Spectral kurtosis of some stationary signals are analytically obtained and used in simulation study. Kurtosis of time domain has been a popular tool for detecting non-normality. Spectral kurtosis is an extension of kurtosis in frequency domain. The relationship between time domain and frequency domain analysis is establish through power spectrum-autocovariance Fourier transform. Fourier transform is the main tool for estimation in frequency domain. The power spectral density is estimated through periodogram. In this paper, the short time Fourier transform of the spectral kurtosis is reviewed, a bearing fault (inner ring and outer ring) is simulated. The bearing response, power spectrum, and spectral kurtosis are plotted to

Spectral-Temporal Modulated Ripple Discrimination by Children With Cochlear Implants.

PubMed

Landsberger, David M; Padilla, Monica; Martinez, Amy S; Eisenberg, Laurie S

A postlingually implanted adult typically develops hearing with an intact auditory system, followed by periods of deafness (or near deafness) and adaptation to the implant. For an early implanted child whose brain is highly plastic, the auditory system matures with consistent input from a cochlear implant. It is likely that the auditory system of early implanted cochlear implant users is fundamentally different than postlingually implanted adults. The purpose of this study is to compare the basic psychophysical capabilities and limitations of these two populations on a spectral resolution task to determine potential effects of early deprivation and plasticity. Performance on a spectral resolution task (Spectral-temporally Modulated Ripple Test [SMRT]) was measured for 20 bilaterally implanted, prelingually deafened children (between 5 and 13 years of age) and 20 hearing children within the same age range. Additionally, 15 bilaterally implanted, postlingually deafened adults, and 10 hearing adults were tested on the same task. Cochlear implant users (adults and children) were tested bilaterally, and with each ear alone. Hearing listeners (adults and children) were tested with the unprocessed SMRT and with a vocoded version that simulates an 8-channel cochlear implant. For children with normal hearing, a positive correlation was found between age and SMRT score for both the unprocessed and vocoded versions. Older hearing children performed similarly to hearing adults in both the unprocessed and vocoded test conditions. However, for children with cochlear implants, no significant relationship was found between SMRT score and chronological age, age at implantation, or years of implant experience. Performance by children with cochlear implants was poorer than performance by cochlear implanted adults. It was also found that children implanted sequentially tended to have better scores with the first implant compared with the second implant. This difference was not

Early-type Galaxy Spin Evolution in the Horizon-AGN Simulation

NASA Astrophysics Data System (ADS)

Choi, Hoseung; Yi, Sukyoung K.; Dubois, Yohan; Kimm, Taysun; Devriendt, Julien. E. G.; Pichon, Christophe

2018-04-01

Using the Horizon-AGN simulation data, we study the relative role of mergers and environmental effects in shaping the spin of early-type galaxies (ETGs) after z ≃ 1. We follow the spin evolution of 10,037 color-selected ETGs more massive than {10}10 {M}ȯ that are divided into four groups: cluster centrals (3%), cluster satellites (33%), group centrals (5%), and field ETGs (59%). We find a strong mass dependence of the slow rotator fraction, f SR, and the mean spin of massive ETGs. Although we do not find a clear environmental dependence of f SR, a weak trend is seen in the mean value of the spin parameter driven by the satellite ETGs as they gradually lose their spin as their environment becomes denser. Galaxy mergers appear to be the main cause of total spin changes in 94% of the central ETGs of halos with {M}vir}> {10}12.5 {M}ȯ , but only 22% of satellite and field ETGs. We find that non-merger-induced tidal perturbations better correlate with the galaxy spin down in satellite ETGs than in mergers. Given that the majority of ETGs are not central in dense environments, we conclude that non-merger tidal perturbation effects played a key role in the spin evolution of ETGs observed in the local (z < 1) universe.

Intensity noise reduction of a high-power nonlinear femtosecond fiber amplifier based on spectral-breathing self-similar parabolic pulse evolution

NASA Astrophysics Data System (ADS)

Wang, Sijia; Liu, Bowen; Song, Youjian; Hu, Minglie

2016-04-01

We report on a simple passive scheme to reduce the intensity noise of high-power nonlinear fiber amplifiers by use of the spectral-breathing parabolic evolution of the pulse amplification with an optimized negative initial chirp. In this way, the influences of amplified spontaneous emission (ASE) on the amplifier intensity noise can be efficiently suppressed, owing to the lower overall pulse chirp, shorter spectral broadening distance, as well as the asymptotic attractive nature of self-similar pulse amplification. Systematic characterizations of the relative intensity noise (RIN) of a free-running nonlinear Yb-doped fiber amplifier are performed over a series of initial pulse parameters. Experiments show that the measured amplifier RIN increases respect to the decreased input pulse energy, due to the increased amount of ASE noise. For pulse amplification with a proper negative initial chirp, the increase of RIN is found to be smaller than with a positive initial chirp, confirming the ASE noise tolerance of the proposed spectral-breathing parabolic amplification scheme. At the maximum output average power of 27W (25-dB amplification gain), the incorporation of an optimum negative initial chirp (-0.84 chirp parameter) leads to a considerable amplifier root-mean-square (rms) RIN reduction of ~20.5% (integrated from 10 Hz to 10 MHz Fourier frequency). The minimum amplifier rms RIN of 0.025% (integrated from 1 kHz to 5 MHz Fourier frequency) is obtained along with the transform-limited compressed pulse duration of 55fs. To our knowledge, the demonstrated intensity noise performance is the lowest RIN level measured from highpower free-running femtosecond fiber amplifiers.

GRO J1655-40: Early Stages of the 2005 Outburst

NASA Technical Reports Server (NTRS)

Shaposhnikov, N.; Swank, Jean; Shrader, C. R.; Rupen, M.; Beckmann, V.; Markwardt, C. B.; Smith, D. A.

2007-01-01

The black-hole X-ray binary transient GRO J1655-40 underwent an outburst beginning in early 2005. We present the results of our multi-wavelength observational campaign to study the early outburst spectral and temporal evolution, which combines data from X-ray (RXTE, INTEGRAL), radio (VLA) and optical (ROTSE, SMARTS) instruments. During the reported period the source left quiescence and went through four major accreting black hole states: low-hard, hard intermediate, soft intermediate and high-soft. We investigated dipping behavior in the RXTE band and compare our results to the 1996-1997 case, when the source was predominantly in the high-soft state, finding significant differences. We consider the evolution of the low frequency quasi-periodic oscillations and find that the frequency strongly correlates with the spectral characteristics, before shutting off prior to the transition to the high-soft state. We model the broad-band high-energy spectrum in the context of empirical models, as well as more physically motivated thermal and bulk-motion Comptonization and Compton reflection models. RXTE and INTEGRAL data together support a statistically significant high energy cut-off in the energy spectrum at approximately equal to 100 - 200 keV during the low-hard state. The RXTE data alone also show it very significantly during the transition, but cannot see one in the high-soft state spectra. We consider radio, optical and X-ray connections in the context of possible synchrotron and synchrotron self-Compton origins of X-ray emission in low-hard and intermediate states. In this outburst of GRO J1655-40, the radio flux does not rise strongly with the X-ray flux.

High-frequency spectral ultrasound imaging (SUSI) visualizes early post-traumatic heterotopic ossification (HO) in a mouse model.

PubMed

Ranganathan, Kavitha; Hong, Xiaowei; Cholok, David; Habbouche, Joe; Priest, Caitlin; Breuler, Christopher; Chung, Michael; Li, John; Kaura, Arminder; Hsieh, Hsiao Hsin Sung; Butts, Jonathan; Ucer, Serra; Schwartz, Ean; Buchman, Steven R; Stegemann, Jan P; Deng, Cheri X; Levi, Benjamin

2018-04-01

Early treatment of heterotopic ossification (HO) is currently limited by delayed diagnosis due to limited visualization at early time points. In this study, we validate the use of spectral ultrasound imaging (SUSI) in an animal model to detect HO as early as one week after burn tenotomy. Concurrent SUSI, micro CT, and histology at 1, 2, 4, and 9weeks post-injury were used to follow the progression of HO after an Achilles tenotomy and 30% total body surface area burn (n=3-5 limbs per time point). To compare the use of SUSI in different types of injury models, mice (n=5 per group) underwent either burn/tenotomy or skin incision injury and were imaged using a 55MHz probe on VisualSonics VEVO 770 system at one week post injury to evaluate the ability of SUSI to distinguish between edema and HO. Average acoustic concentration (AAC) and average scatterer diameter (ASD) were calculated for each ultrasound image frame. Micro CT was used to calculate the total volume of HO. Histology was used to confirm bone formation. Using SUSI, HO was visualized as early as 1week after injury. HO was visualized earliest by 4weeks after injury by micro CT. The average acoustic concentration of HO was 33% more than that of the control limb (n=5). Spectroscopic foci of HO present at 1week that persisted throughout all time points correlated with the HO present at 9weeks on micro CT imaging. SUSI visualizes HO as early as one week after injury in an animal model. SUSI represents a new imaging modality with promise for early diagnosis of HO. Copyright © 2018 Elsevier Inc. All rights reserved.

The evolution of early cellular systems viewed through the lens of biological interactions.

PubMed

Poole, Anthony M; Lundin, Daniel; Rytkönen, Kalle T

2015-01-01

The minimal cell concept represents a pragmatic approach to the question of how few genes are required to run a cell. This is a helpful way to build a parts-list, and has been more successful than attempts to deduce a minimal gene set for life by inferring the gene repertoire of the last universal common ancestor, as few genes trace back to this hypothetical ancestral state. However, the study of minimal cellular systems is the study of biological outliers where, by practical necessity, coevolutionary interactions are minimized or ignored. In this paper, we consider the biological context from which minimal genomes have been removed. For instance, some of the most reduced genomes are from endosymbionts and are the result of coevolutionary interactions with a host; few such organisms are "free-living." As few, if any, biological systems exist in complete isolation, we expect that, as with modern life, early biological systems were part of an ecosystem, replete with organismal interactions. We favor refocusing discussions of the evolution of cellular systems on processes rather than gene counts. We therefore draw a distinction between a pragmatic minimal cell (an interesting engineering problem), a distributed genome (a system resulting from an evolutionary transition involving more than one cell) and the looser coevolutionary interactions that are ubiquitous in ecosystems. Finally, we consider the distributed genome and coevolutionary interactions between genomic entities in the context of early evolution.

A model for the evolution of the Earth's mantle structure since the Early Paleozoic

NASA Astrophysics Data System (ADS)

Zhang, Nan; Zhong, Shijie; Leng, Wei; Li, Zheng-Xiang

2010-06-01

Seismic tomography studies indicate that the Earth's mantle structure is characterized by African and Pacific seismically slow velocity anomalies (i.e., superplumes) and circum-Pacific seismically fast anomalies (i.e., a globally spherical harmonic degree 2 structure). However, the cause for and time evolution of the African and Pacific superplumes and the degree 2 mantle structure remain poorly understood with two competing proposals. First, the African and Pacific superplumes have remained largely unchanged for at least the last 300 Myr and possibly much longer. Second, the African superplume is formed sometime after the formation of Pangea (i.e., at 330 Ma) and the mantle in the African hemisphere is predominated by cold downwelling structures before and during the assembly of Pangea, while the Pacific superplume has been stable for the Pangea supercontinent cycle (i.e., globally a degree 1 structure before the Pangea formation). Here, we construct a proxy model of plate motions for the African hemisphere for the last 450 Myr since the Early Paleozoic using the paleogeographic reconstruction of continents constrained by paleomagnetic and geological observations. Coupled with assumed oceanic plate motions for the Pacific hemisphere, this proxy model for the plate motion history is used as time-dependent surface boundary condition in three-dimensional spherical models of thermochemical mantle convection to study the evolution of mantle structure, particularly the African mantle structure, since the Early Paleozoic. Our model calculations reproduce well the present-day mantle structure including the African and Pacific superplumes and generally support the second proposal with a dynamic cause for the superplume structure. Our results suggest that while the mantle in the African hemisphere before the assembly of Pangea is predominated by the cold downwelling structure resulting from plate convergence between Gondwana and Laurussia, it is unlikely that the bulk of

Early evolution of the angiosperm clade Asteraceae in the Cretaceous of Antarctica.

PubMed

Barreda, Viviana D; Palazzesi, Luis; Tellería, Maria C; Olivero, Eduardo B; Raine, J Ian; Forest, Félix

2015-09-01

The Asteraceae (sunflowers and daisies) are the most diverse family of flowering plants. Despite their prominent role in extant terrestrial ecosystems, the early evolutionary history of this family remains poorly understood. Here we report the discovery of a number of fossil pollen grains preserved in dinosaur-bearing deposits from the Late Cretaceous of Antarctica that drastically pushes back the timing of assumed origin of the family. Reliably dated to ∼76-66 Mya, these specimens are about 20 million years older than previously known records for the Asteraceae. Using a phylogenetic approach, we interpreted these fossil specimens as members of an extinct early diverging clade of the family, associated with subfamily Barnadesioideae. Based on a molecular phylogenetic tree calibrated using fossils, including the ones reported here, we estimated that the most recent common ancestor of the family lived at least 80 Mya in Gondwana, well before the thermal and biogeographical isolation of Antarctica. Most of the early diverging lineages of the family originated in a narrow time interval after the K/P boundary, 60-50 Mya, coinciding with a pronounced climatic warming during the Late Paleocene and Early Eocene, and the scene of a dramatic rise in flowering plant diversity. Our age estimates reduce earlier discrepancies between the age of the fossil record and previous molecular estimates for the origin of the family, bearing important implications in the evolution of flowering plants in general.

Early evolution of the angiosperm clade Asteraceae in the Cretaceous of Antarctica

PubMed Central

Barreda, Viviana D.; Palazzesi, Luis; Tellería, Maria C.; Olivero, Eduardo B.; Raine, J. Ian; Forest, Félix

2015-01-01

The Asteraceae (sunflowers and daisies) are the most diverse family of flowering plants. Despite their prominent role in extant terrestrial ecosystems, the early evolutionary history of this family remains poorly understood. Here we report the discovery of a number of fossil pollen grains preserved in dinosaur-bearing deposits from the Late Cretaceous of Antarctica that drastically pushes back the timing of assumed origin of the family. Reliably dated to ∼76–66 Mya, these specimens are about 20 million years older than previously known records for the Asteraceae. Using a phylogenetic approach, we interpreted these fossil specimens as members of an extinct early diverging clade of the family, associated with subfamily Barnadesioideae. Based on a molecular phylogenetic tree calibrated using fossils, including the ones reported here, we estimated that the most recent common ancestor of the family lived at least 80 Mya in Gondwana, well before the thermal and biogeographical isolation of Antarctica. Most of the early diverging lineages of the family originated in a narrow time interval after the K/P boundary, 60–50 Mya, coinciding with a pronounced climatic warming during the Late Paleocene and Early Eocene, and the scene of a dramatic rise in flowering plant diversity. Our age estimates reduce earlier discrepancies between the age of the fossil record and previous molecular estimates for the origin of the family, bearing important implications in the evolution of flowering plants in general. PMID:26261324

Metabolic Mapping of Breast Cancer with Multiphoton Spectral and Lifetime Imaging

DTIC Science & Technology

2007-03-01

spectral and lifetime characterization of NADH may be used to reveal metabolic changes in vivo and has potential to be used as an early diagnostic...combined spectral lifetime imaging modality will help for 5 characterization of breast cancer cells from cell culture based models to a relevant in... spectral and lifetime system and integrated into a multiphoton fluorescence excitation microscopy system 7 • Calibrated and characterized this

Space Station evolution

NASA Technical Reports Server (NTRS)

Black, David C.

1987-01-01

The Space Station that will be launched and made operational in the early 1990s should be viewed as a beginning, a facility that will evolve with the passing of time to better meet the needs and requirements of a diverse set of users. Evolution takes several forms, ranging from simple growth through addition of infrastructure elements to upgrading of system capability through inclusion of advanced technologies. Much of the early considerations of Space Station evolution focused on physical growth. However, a series of recent workshops have revealed that the more likely mode of Space Station evolution will not be through growth but rather through a process known as 'branching'.

Compressive Spectral Method for the Simulation of the Nonlinear Gravity Waves

PubMed Central

Bayındır, Cihan

2016-01-01

In this paper an approach for decreasing the computational effort required for the spectral simulations of the fully nonlinear ocean waves is introduced. The proposed approach utilizes the compressive sampling algorithm and depends on the idea of using a smaller number of spectral components compared to the classical spectral method. After performing the time integration with a smaller number of spectral components and using the compressive sampling technique, it is shown that the ocean wave field can be reconstructed with a significantly better efficiency compared to the classical spectral method. For the sparse ocean wave model in the frequency domain the fully nonlinear ocean waves with Jonswap spectrum is considered. By implementation of a high-order spectral method it is shown that the proposed methodology can simulate the linear and the fully nonlinear ocean waves with negligible difference in the accuracy and with a great efficiency by reducing the computation time significantly especially for large time evolutions. PMID:26911357

Sibling cooperation in earwig families provides insights into the early evolution of social life.

PubMed

Falk, Joachim; Wong, Janine W Y; Kölliker, Mathias; Meunier, Joël

2014-04-01

The evolutionary transition from solitary to social life is driven by direct and indirect fitness benefits of social interactions. Understanding the conditions promoting the early evolution of social life therefore requires identification of these benefits in nonderived social systems, such as animal families where offspring are mobile and able to disperse and will survive independently. Family life is well known to provide benefits to offspring through parental care, but research on sibling interactions generally focused on fitness costs to offspring due to competitive behaviors. Here we show experimentally that sibling interactions also reflect cooperative behaviors in the form of food sharing in nonderived families of the European earwig, Forficula auricularia. Food ingested by individual offspring was transferred to their siblings through mouth-to-anus contacts and active allo-coprophagy. These transfers occurred in both the presence and the absence of the tending mothers, even though the direct contact with the mothers limited sibling food sharing. Neither food deprivation or relatedness influenced the total amount of transferred food, but relatedness affected frass release and the behavioral mechanisms mediating food sharing. Related offspring obtained food predominately through allo-coprophagy, whereas unrelated offspring obtained food through mouth-to-anus contacts. Overall, this study emphasizes that sibling cooperation may be a key process promoting the early evolution of social life.

Molecular Evolution of Aminoacyl tRNA Synthetase Proteins in the Early History of Life

NASA Astrophysics Data System (ADS)

Fournier, Gregory P.; Andam, Cheryl P.; Alm, Eric J.; Gogarten, J. Peter

2011-12-01

Aminoacyl-tRNA synthetases (aaRS) consist of several families of functionally conserved proteins essential for translation and protein synthesis. Like nearly all components of the translation machinery, most aaRS families are universally distributed across cellular life, being inherited from the time of the Last Universal Common Ancestor (LUCA). However, unlike the rest of the translation machinery, aaRS have undergone numerous ancient horizontal gene transfers, with several independent events detected between domains, and some possibly involving lineages diverging before the time of LUCA. These transfers reveal the complexity of molecular evolution at this early time, and the chimeric nature of genomes within cells that gave rise to the major domains. Additionally, given the role of these protein families in defining the amino acids used for protein synthesis, sequence reconstruction of their pre-LUCA ancestors can reveal the evolutionary processes at work in the origin of the genetic code. In particular, sequence reconstructions of the paralog ancestors of isoleucyl- and valyl- RS provide strong empirical evidence that at least for this divergence, the genetic code did not co-evolve with the aaRSs; rather, both amino acids were already part of the genetic code before their cognate aaRSs diverged from their common ancestor. The implications of this observation for the early evolution of RNA-directed protein biosynthesis are discussed.

Wind growth and wave breaking in higher-order spectral phase resolved wave models

NASA Astrophysics Data System (ADS)

Leighton, R.; Walker, D. T.

2016-02-01

Wind growth and wave breaking are a integral parts of the wave evolution. Higher-OrderSpectral models (HoS) describing the non-linear evolution require empirical models for these effects. In particular, the assimilation of phase-resolved remotesensing data will require the prediction and modeling of wave breaking events.The HoS formulation used in this effort is based on fully nonlinear model of O. Nwogu (2009). The model for wave growth due to wind is based on the early normal and tangential stress model of Munk (1947). The model for wave breaking contains two parts. The first part initiates the breaking events based on the local wave geometry and the second part is a model for the pressure field, which acting against the surface normal velocity extracts energy from the wave. The models are tuned to balance the wind energy input with the breaking wave losses and to be similarfield observations of breaking wave coverage. The initial wave field, based on a Pierson-Moskowitz spectrum for 10 meter wind speed of 5-15 m/s, defined over a region of up to approximate 2.5 km on a side with the simulation running for several hundreds of peak wave periods. Results will be presented describing the evolution of the wave field.Sponsored by Office of Naval Research, Code 322

IMF and [Na/Fe] abundance ratios from optical and NIR spectral features in early-type galaxies

NASA Astrophysics Data System (ADS)

La Barbera, F.; Vazdekis, A.; Ferreras, I.; Pasquali, A.; Allende Prieto, C.; Röck, B.; Aguado, D. S.; Peletier, R. F.

2017-01-01

We present a joint analysis of the four most prominent sodium-sensitive features (Na D, Na I λ8190Å, Na I λ1.14 μm, and Na I λ2.21 μm), in the optical and near-infrared spectral ranges, of two nearby, massive (σ ˜ 300 km s-1), early-type galaxies (named XSG1 and XSG2). Our analysis relies on deep Very Large Telescope/X-Shooter long-slit spectra, along with newly developed stellar population models, allowing for [Na/Fe] variations, up to ˜1.2 dex, over a wide range of age, total metallicity, and initial mass function (IMF) slope. The new models show that the response of the Na-dependent spectral indices to [Na/Fe] is stronger when the IMF is bottom heavier. For the first time, we are able to match all four Na features in the central regions of massive early-type galaxies finding an overabundance of [Na/Fe] in the range 0.5-0.7 dex and a bottom-heavy IMF. Therefore, individual abundance variations cannot be fully responsible for the trends of gravity-sensitive indices, strengthening the case towards a non-universal IMF. Given current limitations of theoretical atmosphere models, our [Na/Fe] estimates should be taken as upper limits. For XSG1, where line strengths are measured out to ˜0.8 Re, the radial trend of [Na/Fe] is similar to [α/Fe] and [C/Fe], being constant out to ˜0.5 Re, and decreasing by ˜0.2-0.3 dex at ˜0.8 Re, without any clear correlation with local metallicity. Such a result seems to be in contrast to the predicted increase of Na nucleosynthetic yields from asymptotic giant branch stars and Type II supernovae. For XSG1, the Na-inferred IMF radial profile is consistent, within the errors, with that derived from TiO features and the Wing-Ford band presented in a recent paper.

The early evolution of Jupiter in the absence of solar tidal forces

NASA Astrophysics Data System (ADS)

Schofield, N.; Woolfson, M. M.

1982-03-01

The early evolution of a Jupiter-like protoplanet is simulated by constructing a physically detailed computer-based model which solves the equations of hydrodynamics and radiative energy transfer for the spherically symmetric case. The model is specifically developed to study the initial and boundary conditions relevant to the capture theory for the origin of the solar system. It is found that the absence of an external medium promotes the rapid expansion of surface material which is enhanced by solar irradiation. Only when the Jeans criterion is less than 0.8 does a spontaneous hydrodynamic collapse of the interior allow a substantial proportion of the protoplanet to condense to planetary densities.

A Comparison of the Near-Infrared Spectral Features of Early-Type Galaxies in the Virgo and Coma Clusters

NASA Astrophysics Data System (ADS)

Houdashelt, M. L.

1992-05-01

Initial results are presented from an examination of near-infrared spectra (6800 - 9200 Angstroms) of 34 early-type galaxies - 17 in the Virgo cluster, 10 in the Coma cluster and seven field members. It has previously been speculated that E/S0 galaxies of similar luminosity in the Virgo and Coma clusters have different red stellar populations. To explore this possibility, pseudo-equivalent widths of a number of near-IR spectral features have been measured. The important features studied include the TiO bands near 7100, 7890, 8197, 8500 and 8950 Angstroms, which are mainly produced by the late-type stars whose flux contributes only about 10-20\\ the near-IR. The strengths of the Ca triplet (8498, 8542, 8662 Angstroms) and Na I doublet (8183, 8195 Angstroms) are also measured, since these features are affected by the relative contribution of dwarf stars to the red light. Although the main focus of this work is the search for spectral differences among the Coma, Virgo and field E/S0 populations, each subgroup of galaxies (and the sample as a whole) are also examined for correlations among the feature strengths, galaxy color and luminosity.

The formation and early evolution of meteoroid streams

NASA Astrophysics Data System (ADS)

Moorhead, Althea

2018-04-01

Meteor showers occur when the Earth encounters a stream of particles liberated from the surface of a comet or, more rarely, an asteroid. Initially, meteoroids follow a trajectory that is similar to that of their parent comet but modified by both the outward flow of gas from the nucleus and radiation pressure. Sublimating gases impart an “ejection velocity” to solid particles in the coma; this ejection velocity is larger for smaller particles but cannot exceed the speed of the gas itself. Radiation pressure provides a repulsive force that, like gravity, follows an inverse square law, and thus effectively reduces the central potential experienced by small particles. Depending on the optical properties of the particle, the speed of the particle may exceed its effective escape velocity; such particles will be unbound and hence excluded from meteoroid streams and meteor showers. These processes also modify the heliocentric distance at which meteoroid orbits cross the ecliptic plane, and can thus move portions of the stream out of range of the Earth. This talk presents recent work on these components of the early evolution of meteoroid streams and their implications for the meteoroid environment seen at Earth.

Early evolution of radial glial cells in Bilateria

PubMed Central

Karl, Anett; Beckers, Patrick; Kaul-Strehlow, Sabrina; Ulbricht, Elke; Kourtesis, Ioannis; Kuhrt, Heidrun; Hausen, Harald; Reichenbach, Andreas; Bleidorn, Christoph

2017-01-01

Bilaterians usually possess a central nervous system, composed of neurons and supportive cells called glial cells. Whereas neuronal cells are highly comparable in all these animals, glial cells apparently differ, and in deuterostomes, radial glial cells are found. These particular secretory glial cells may represent the archetype of all (macro) glial cells and have not been reported from protostomes so far. This has caused controversial discussions of whether glial cells represent a homologous bilaterian characteristic or whether they (and thus, centralized nervous systems) evolved convergently in the two main clades of bilaterians. By using histology, transmission electron microscopy, immunolabelling and whole-mount in situ hybridization, we show here that protostomes also possess radial glia-like cells, which are very likely to be homologous to those of deuterostomes. Moreover, our antibody staining indicates that the secretory character of radial glial cells is maintained throughout their various evolutionary adaptations. This implies an early evolution of radial glial cells in the last common ancestor of Protostomia and Deuterostomia. Furthermore, it suggests that an intraepidermal nervous system—composed of sensory cells, neurons and radial glial cells—was probably the plesiomorphic condition in the bilaterian ancestor. PMID:28724733

Visible spectral slope survey of Jupiter Trojans

NASA Astrophysics Data System (ADS)

Erasmus, Nicolas; Rivkin, Andrew S.; Sickafoose, Amanda A.

2016-10-01

Jupiter's Trojans are predicted by the Nice Model [1,2] to be Trans-Neptunian Objects (TNOs) that moved from 30+ AU to 5.2 AU during the early evolution period of the Solar System. This model, predicting giant planet migration and widespread transport of material throughout the Solar System, is however still lacking important constraints. Correlations between the composition, size, and orbital geometry of Jupiter's Trojans can provide additional information to test predicted migration and evolution models.Two main colour groups have been observed, roughly equivalent to the C (plus low-albedo X) and D classes with distinguishable spectral slopes, and one interpretation is that the two groups have different compositions [3]. Independent compositions together with hints of differing orbital inclination distributions could imply separate formation locations; therefore, determining the relative fractions of C and D asteroids at different sizes would provide a key test for Solar System dynamical models. However, there is a caveat: the distinct colour groups could also arise by other means. Regolith processes or "space weathering" such as micrometeorite impacts and UV irradiation of ice are also plausible explanations for a range of spectrographic slopes from C-like to D-like [4].Here we report on our latest survey observations at Sutherland, South Africa of approximately 50 Trojan targets using the Sutherland High Speed Optical Camera (SHOC) [5] on the 74" telescope. These observations are part of a larger multi-telescope survey to determine the spectral slopes (C-like or D-like) for multiple Trojans, focusing on those of small size. These slopes can be used to determine the relative fraction of C+X and D asteroids at different sizes to determine whether what is seen is more consistent with regolith processes or different compositions.References:[1] A. Morbidelli, et al. Nature, 435, 462-465, (2005)[2] R. Gomes, et al. Nature 435, 466-469 (2005)[3] J.P. Emery, et al. The

Implication of the Observable Spectral Cutoff Energy Evolution in XTE J1550-564

NASA Technical Reports Server (NTRS)

Titarchuk, Lev; Shaposhnikov, Nikolai

2010-01-01

The physical mechanisms responsible for production of the non-thermal emission in accreting black holes should be imprinted in the observational appearances of the power law tails in the X-ray spectra from these objects. Variety of spectral states observed from galactic black hole binaries by it Rossi X-ray Timing Explorer (RXTE) allow examination of the photon upscattering under different accretion regimes. We revisit of RXTE data collected from the black hole X-ray binary XTE J1550-564 during two periods of X-ray activity in 1998 and 2000 focusing on the behavior of the high energy cutoff of the power law part of the spectrum. For the 1998 outburst the Iran- sition from the low-hard state to the intermediate state was accompanied by a gradual decrease in the cutoff energy which then showed a sharp reversal to a clear increasing trend during the further evolution towards the very high and high-soft states. However, the 2000 outburst showed only the decreasing part of this pattern. Notably, the photon indexes corresponding to the cutoff increase for the 1998 event are much higher than the index values reached during the 2000 rise transition. We attribute this difference in the cutoff' energy behav- for to the different partial contributions of the thermal and non-thermal (bulk motion) Comptonization in photon upscattering. Namely, during the 1998 event the higher accretion rate presumably provided more cooling to the Comptonizing media and thus reducing the effectiveness of the thermal upscattering process. Under these conditions the bulk motion takes a leading role in boosting the input soft photons. Monte Carlo simulations of the The physical mechanisms responsible for production of the non-thermal emission in accreting black holes should be imprinted in the observational apperances of the power law tails in the X-ray spectra from these objects. Variety of spectral states observed from galactic black hole binaries by it Rossi X-ray Timing Explorer (RXTE) allow

Origin and tectonic evolution of early Paleozoic arc terranes abutting the northern margin of North China Craton

NASA Astrophysics Data System (ADS)

Zhou, Hao; Pei, Fu-Ping; Zhang, Ying; Zhou, Zhong-Biao; Xu, Wen-Liang; Wang, Zhi-Wei; Cao, Hua-Hua; Yang, Chuan

2017-12-01

The origin and tectonic evolution of the early Paleozoic arc terranes abutting the northern margin of the North China Craton (NCC) are widely debated. This paper presents detrital zircon U-Pb and Hf isotopic data of early Paleozoic strata in the Zhangjiatun arc terrane of central Jilin Province, northeast (NE) China, and compares them with the Bainaimiao and Jiangyu arc terranes abutting the northern margin of the NCC. Detrital zircons from early Paleozoic strata in three arc terranes exhibit comparable age groupings of 539-430, 1250-577, and 2800-1600 Ma. The Paleoproterozoic to Neoarchean ages and Hf isotopic composition of the detrital zircons imply the existence of the Precambrian fragments beneath the arc terranes. Given the evidences from geology, igneous rocks, and detrital zircons, we proposed that the early Paleozoic arc terranes abutting the northern margin of the NCC are a united arc terrane including the exotic Precambrian fragments, and these fragments shared a common evolutionary history from Neoproterozoic to early-middle Paleozoic.

Patterns of a spatial exploration under time evolution of the attractiveness: Persistent nodes, degree distribution, and spectral properties

NASA Astrophysics Data System (ADS)

da Silva, Roberto

2018-06-01

This work explores the features of a graph generated by agents that hop from one node to another node, where the nodes have evolutionary attractiveness. The jumps are governed by Boltzmann-like transition probabilities that depend both on the euclidean distance between the nodes and on the ratio (β) of the attractiveness between them. It is shown that persistent nodes, i.e., nodes that never been reached by this special random walk are possible in the stationary limit differently from the case where the attractiveness is fixed and equal to one for all nodes (β = 1). Simultaneously, one also investigates the spectral properties and statistics related to the attractiveness and degree distribution of the evolutionary network. Finally, a study of the crossover between persistent phase and no persistent phase was performed and it was also observed the existence of a special type of transition probability which leads to a power law behaviour for the time evolution of the persistence.

Ceres Evolution: From Thermodynamic Modeling and Now Dawn Observation

NASA Astrophysics Data System (ADS)

McCord, T. B.; Combe, J. P.; Castillo, J. C.; Raymond, C. A.; De Sanctis, M. C.; Jaumann, R.; Ammannito, E.; Russell, C. T.

2015-12-01

Thermodynamic modeling indicated that Ceres has experienced planetary processes, including extensive melting of its ~25% water and differentiation, (McCord and Sotin, JGR, 2005; Castillo and McCord, Icarus, 2009). Early telescopic studies showed Ceres' surface to be spectrally similar to carboneous-chondrite-like material, i.e., aqueously altered silicates darkened by carbon, with a water-OH-related absorption near 3.06 µm. Later observations improved the spectra and suggested more specific interpretations: Structural water in clay minerals, phyllosilicates, perhaps ammoniated, iron-rich clays, carbonates, brucite, all implying extensive aqueous alteration, perhaps in the presence of CO2. Telescopic observations and thermodynamic models predicted Dawn would find a very different body compared to Vesta (e.g. McCord et al., SSR, 2011), as current Dawn observations are confirming. Ceres' original water ice should have melted early in its evolution, with the resulting differentiation and mineralization strongly affecting Ceres' composition, size and shape over time. The ocean should have become very salty and perhaps may still be liquid in places. The surface composition from telescopes seems to reflect this complex history. The mineralization with repeated mixing of the crust with the early liquid interior and with in-fall from space would create a complex surface that will present an interpretation challenge for Dawn. The Dawn spacecraft is currently collecting observations of Ceres' landforms, elemental and mineralogical/molecular composition and gravity field from orbit. Early results suggest a heavily cratered but distorted and lumpy body with features and composition consistent with internal activity, perhaps recent or current, associated with water and perhaps other volatiles. We will present and interpret the latest Dawn Ceres findings and how they affect our earlier understanding of Ceres evolution from modeling and telescope observations.

Hyperspectral retinal imaging with a spectrally tunable light source

NASA Astrophysics Data System (ADS)

Francis, Robert P.; Zuzak, Karel J.; Ufret-Vincenty, Rafael

2011-03-01

Hyperspectral retinal imaging can measure oxygenation and identify areas of ischemia in human patients, but the devices used by current researchers are inflexible in spatial and spectral resolution. We have developed a flexible research prototype consisting of a DLP®-based spectrally tunable light source coupled to a fundus camera to quickly explore the effects of spatial resolution, spectral resolution, and spectral range on hyperspectral imaging of the retina. The goal of this prototype is to (1) identify spectral and spatial regions of interest for early diagnosis of diseases such as glaucoma, age-related macular degeneration (AMD), and diabetic retinopathy (DR); and (2) define required specifications for commercial products. In this paper, we describe the challenges and advantages of using a spectrally tunable light source for hyperspectral retinal imaging, present clinical results of initial imaging sessions, and describe how this research can be leveraged into specifying a commercial product.

Complementary shifts in photoreceptor spectral tuning unlock the full adaptive potential of ultraviolet vision in birds.

PubMed

Toomey, Matthew B; Lind, Olle; Frederiksen, Rikard; Curley, Robert W; Riedl, Ken M; Wilby, David; Schwartz, Steven J; Witt, Christopher C; Harrison, Earl H; Roberts, Nicholas W; Vorobyev, Misha; McGraw, Kevin J; Cornwall, M Carter; Kelber, Almut; Corbo, Joseph C

2016-07-12

Color vision in birds is mediated by four types of cone photoreceptors whose maximal sensitivities (λmax) are evenly spaced across the light spectrum. In the course of avian evolution, the λmax of the most shortwave-sensitive cone, SWS1, has switched between violet (λmax > 400 nm) and ultraviolet (λmax < 380 nm) multiple times. This shift of the SWS1 opsin is accompanied by a corresponding short-wavelength shift in the spectrally adjacent SWS2 cone. Here, we show that SWS2 cone spectral tuning is mediated by modulating the ratio of two apocarotenoids, galloxanthin and 11’,12’-dihydrogalloxanthin, which act as intracellular spectral filters in this cell type. We propose an enzymatic pathway that mediates the differential production of these apocarotenoids in the avian retina, and we use color vision modeling to demonstrate how correlated evolution of spectral tuning is necessary to achieve even sampling of the light spectrum and thereby maintain near-optimal color discrimination.

Computer simulation on the cooperation of functional molecules during the early stages of evolution.

PubMed

Ma, Wentao; Hu, Jiming

2012-01-01

It is very likely that life began with some RNA (or RNA-like) molecules, self-replicating by base-pairing and exhibiting enzyme-like functions that favored the self-replication. Different functional molecules may have emerged by favoring their own self-replication at different aspects. Then, a direct route towards complexity/efficiency may have been through the coexistence/cooperation of these molecules. However, the likelihood of this route remains quite unclear, especially because the molecules would be competing for limited common resources. By computer simulation using a Monte-Carlo model (with "micro-resolution" at the level of nucleotides and membrane components), we show that the coexistence/cooperation of these molecules can occur naturally, both in a naked form and in a protocell form. The results of the computer simulation also lead to quite a few deductions concerning the environment and history in the scenario. First, a naked stage (with functional molecules catalyzing template-replication and metabolism) may have occurred early in evolution but required high concentration and limited dispersal of the system (e.g., on some mineral surface); the emergence of protocells enabled a "habitat-shift" into bulk water. Second, the protocell stage started with a substage of "pseudo-protocells", with functional molecules catalyzing template-replication and metabolism, but still missing the function involved in the synthesis of membrane components, the emergence of which would lead to a subsequent "true-protocell" substage. Third, the initial unstable membrane, composed of prebiotically available fatty acids, should have been superseded quite early by a more stable membrane (e.g., composed of phospholipids, like modern cells). Additionally, the membrane-takeover probably occurred at the transition of the two substages of the protocells. The scenario described in the present study should correspond to an episode in early evolution, after the emergence of single

Frequency doubling technique perimetry and spectral domain optical coherence tomography in patients with early glaucoma.

PubMed

Horn, F K; Mardin, C Y; Bendschneider, D; Jünemann, A G; Adler, W; Tornow, R P

2011-01-01

To assess the combined diagnostic power of frequency-doubling technique (FDT)-perimetry and retinal nerve fibre layer (RNFL) thickness measurements with spectral domain optical coherence tomography (SDOCT). The study included 330 experienced participants in five age-related groups: 77 'preperimetric' open-angle glaucoma (OAG) patients, 52 'early' OAG, 50 'moderate' OAG, 54 ocular hypertensive patients, and 97 healthy subjects. For glaucoma assessment in all subjects conventional perimetry, evaluation of fundus photographs, FDT-perimetry and RNFL thickness measurement with SDOCT was done. Glaucomatous visual field defects were classified using the Glaucoma Staging System. FDT evaluation used a published method with casewise calculation of an 'FDT-score', including all missed localized probability levels. SDOCT evaluation used mean RNFL thickness and a new individual SDOCT-score considering normal confidence limits in 32 sectors of a peripapillary circular scan. To examine the joined value of both methods a combined score was introduced. Significance of the difference between Receiver-operating-characteristic (ROC) curves was calculated for a specificity of 96%. Sensitivity in the preperimetric glaucoma group was 44% for SDOCT-score, 25% for FDT-score, and 44% for combined score, in the early glaucoma group 83, 81, and 89%, respectively, and in the moderate glaucoma group 94, 94, and 98%, respectively, all at a specificity of 96%. ROC performance of the newly developed combined score is significantly above single ROC curves of FDT-score in preperimetric and early OAG and above RNFL thickness in moderate OAG. Combination of function and morphology by using the FDT-score and the SDOCT-score performs equal or even better than each single method alone.

Frequency doubling technique perimetry and spectral domain optical coherence tomography in patients with early glaucoma

PubMed Central

Horn, F K; Mardin, C Y; Bendschneider, D; Jünemann, A G; Adler, W; Tornow, R P

2011-01-01

Purpose To assess the combined diagnostic power of frequency-doubling technique (FDT)-perimetry and retinal nerve fibre layer (RNFL) thickness measurements with spectral domain optical coherence tomography (SDOCT). Methods The study included 330 experienced participants in five age-related groups: 77 ‘preperimetric' open-angle glaucoma (OAG) patients, 52 ‘early' OAG, 50 ‘moderate' OAG, 54 ocular hypertensivepatients, and 97 healthy subjects. For glaucoma assessment in all subjects conventional perimetry, evaluation of fundus photographs, FDT-perimetry and RNFL thickness measurement with SDOCT was done. Glaucomatous visual field defects were classified using the Glaucoma Staging System. FDT evaluation used a published method with casewise calculation of an ‘FDT-score', including all missed localized probability levels. SDOCT evaluation used mean RNFL thickness and a new individual SDOCT-score considering normal confidence limits in 32 sectors of a peripapillary circular scan. To examine the joined value of both methods a combined score was introduced. Significance of the difference between Receiver-operating-characteristic (ROC) curves was calculated for a specificity of 96%. Results Sensitivity in the preperimetric glaucoma group was 44% for SDOCT-score, 25% for FDT-score, and 44% for combined score, in the early glaucoma group 83, 81, and 89%, respectively, and in the moderate glaucoma group 94, 94, and 98%, respectively, all at a specificity of 96%. ROC performance of the newly developed combined score is significantly above single ROC curves of FDT-score in preperimetric and early OAG and above RNFL thickness in moderate OAG. Conclusion Combination of function and morphology by using the FDT-score and the SDOCT-score performs equal or even better than each single method alone. PMID:21102494

Equatorial Density Irregularity Structures at Intermediate Scales and Their Temporal Evolution

NASA Technical Reports Server (NTRS)

Kil, Hyosub; Heelis, R. A.

1998-01-01

We examine high resolution measurements of ion density in the equatorial ionosphere from the AE-E satellite during the years 1977-1981. Structure over spatial scales from 18 km to 200 m is characterized by the spectrum of irregularities at larger and smaller scales and at altitudes above 350 km and below 300 km. In the low-altitude region, only small amplitude large-scale (lambda greater than 5 km) density modulations are often observed, and thus the power spectrum of these density structures exhibits a steep spectral slope at kilometer scales. In the high-altitude region, sinusoidal density fluctuations, characterized by enhanced power near 1-km scale, are frequently observed during 2000-0200 LT. However, such fluctuations are confined to regions at the edges of larger bubble structures where the average background density is high. Small amplitude irregularity structures, observed at early local time hours, grow rapidly to high-intensity structures in about 90 min. Fully developed structures, which are observed at late local time hours, decay very slowly producing only-small differences in spectral characteristics even 4 hours later. The local time evolution of irregularity structure is investigated by using average statistics for low-(1% less than sigma less than 5%) and high-intensity (sigma greater than 10%) structures. At lower altitudes, little chance in the spectral slope is seen as a function of local time, while at higher attitudes the growth and maintenance of structures near 1 km scales dramatically affects the spectral slope.

Fourth Symposium on Chemical Evolution and the Origin and Evolution of Life

NASA Technical Reports Server (NTRS)

Wharton, Robert A., Jr. (Editor); Andersen, Dale T. (Editor); Bzik, Sara E. (Editor); Rummel, John D. (Editor)

1991-01-01

This symposium was held at the NASA Ames Research Center, Moffett Field, California, July 24-27, 1990. The NASA exobiology investigators reported their recent research findings. Scientific papers were presented in the following areas: cosmic evolution of biogenic compounds, prebiotic evolution (planetary and molecular), early evolution of life (biological and geochemical), evolution of advanced life, solar system exploration, and the Search for Extraterrestrial Intelligence (SETI).

Early Human Evolution in the Western Palaearctic: Ecological Scenarios

NASA Astrophysics Data System (ADS)

Carrión, José S.; Rose, James; Stringer, Chris

2011-06-01

This review presents the themes of a special issue dealing with environmental scenarios of human evolution during the Early Pleistocene (2.6-0.78 Ma; MIS 103-MIS 19) and early Middle Pleistocene (0.78-0.47 Ma; MIS 19-base of MIS 12) within the western Palaearctic. This period is one of dramatic changes in the climates and the distribution of Palaearctic biota. These changes have played their role in generating adaptive and phyletic patterns within the human ancestry, involving several species such as Homo habilis, "Homo georgicus", Homo erectus, Homo antecessor and Homo heidelbergensis. In the archaeological record, these species include the Oldowan (Mode 1) and Acheulian (Mode 2) lithic technologies. Taphonomic considerations of palaeoecological research in hominin-bearing sites are provided and evaluated. Syntheses are provided for north Africa, western Asia, the Mediterranean Basin, Britain, and continental Europe. Palaeoenvironmental reconstructions based on multidisciplinary data are given for Ain Boucherit, Ain Hanech and El-Kherba in Algeria, Dmanisi in Georgia, Atapuerca, Cueva Negra, and the Orce Basin in Spain, Monte Poggiolo and Pirro Nord in Italy, Pont-de-Lavaud in France, and Mauer in Germany. The state of the art with the Out of Africa 1 dispersal model is reviewed. A source-sink dynamics model for Palaeolithic Europe is described to explain the morphological disparity of H. heidelbergensis (we will sometimes use the informal name "Heidelbergs") and early Neanderthals. Other aspects debated here are the selective value of habitat mosaics including reconstructions based on mammal and avian databases, and the role of geological instability combined with topographic complexity. This review is completed by addressing the question of whether the appearance of evolutionary trends within hominins is concentrated in regions of highest worldwide biological diversity (biodiversity hotspots). It is concluded that the keys for the activation of evolutionary

Functional characterization of spectral tuning mechanisms in the great bowerbird short-wavelength sensitive visual pigment (SWS1), and the origins of UV/violet vision in passerines and parrots.

PubMed

van Hazel, Ilke; Sabouhanian, Amir; Day, Lainy; Endler, John A; Chang, Belinda S W

2013-11-13

One of the most striking features of avian vision is the variation in spectral sensitivity of the short wavelength sensitive (SWS1) opsins, which can be divided into two sub-types: violet- and UV- sensitive (VS & UVS). In birds, UVS has been found in both passerines and parrots, groups that were recently shown to be sister orders. While all parrots are thought to be UVS, recent evidence suggests some passerine lineages may also be VS. The great bowerbird (Chlamydera nuchalis) is a passerine notable for its courtship behaviours in which males build and decorate elaborate bower structures. The great bowerbird SWS1 sequence possesses an unusual residue combination at known spectral tuning sites that has not been previously investigated in mutagenesis experiments. In this study, the SWS1 opsin of C. nuchalis was expressed along with a series of spectral tuning mutants and ancestral passerine SWS1 pigments, allowing us to investigate spectral tuning mechanisms and explore the evolution of UV/violet sensitivity in early passerines and parrots. The expressed C. nuchalis SWS1 opsin was found to be a VS pigment, with a λmax of 403 nm. Bowerbird SWS1 mutants C86F, S90C, and C86S/S90C all shifted λmax into the UV, whereas C86S had no effect. Experimentally recreated ancestral passerine and parrot/passerine SWS1 pigments were both found to be VS, indicating that UV sensitivity evolved independently in passerines and parrots from a VS ancestor. Our mutagenesis studies indicate that spectral tuning in C. nuchalis is mediated by mechanisms similar to those of other birds. Interestingly, our ancestral sequence reconstructions of SWS1 in landbird evolution suggest multiple transitions from VS to UVS, but no instances of the reverse. Our results not only provide a more precise prediction of where these spectral sensitivity shifts occurred, but also confirm the hypothesis that birds are an unusual exception among vertebrates where some descendants re-evolved UVS from a violet type

Spectral features of solar plasma flows

NASA Astrophysics Data System (ADS)

Barkhatov, N. A.; Revunov, S. E.

2014-11-01

Research to the identification of plasma flows in the Solar wind by spectral characteristics of solar plasma flows in the range of magnetohydrodynamics is devoted. To do this, the wavelet skeleton pattern of Solar wind parameters recorded on Earth orbit by patrol spacecraft and then executed their neural network classification differentiated by bandwidths is carry out. This analysis of spectral features of Solar plasma flows in the form of magnetic clouds (MC), corotating interaction regions (CIR), shock waves (Shocks) and highspeed streams from coronal holes (HSS) was made. The proposed data processing and the original correlation-spectral method for processing information about the Solar wind flows for further classification as online monitoring of near space can be used. This approach will allow on early stages in the Solar wind flow detect geoeffective structure to predict global geomagnetic disturbances.

Spectral effects in the propagation of chirped laser pulses in uniform underdense plasma

NASA Astrophysics Data System (ADS)

Pathak, Naveen; Zhidkov, Alexei; Hosokai, Tomonao; Kodama, Ryosuke

2018-01-01

Propagation of linearly chirped and linearly polarized, powerful laser pulses in uniform underdense plasma with their duration exceeding the plasma wave wavelength is examined via 3D fully relativistic particle-in-cell simulations. Spectral evolution of chirped laser pulses, determined by Raman scattering, essentially depends on the nonlinear electron evacuation from the first wake bucket via modulation of the known parameter /n e ( r ) ω0 2 γ . Conversely, the relative motion of different spectral components inside a pulse changes the evolution of the pulse length and, therefore, the ponderomotive forces at the pulse rear. Such longitudinal dynamics of the pulse length provoke a parametric resonance in the laser wake with continuous electron self-injection for any chirped pulses. However, the total charge of accelerated electrons and their energy distribution essentially depends on the chirp. Besides, negatively chirped laser pulses are shown to be useful for spatially resolved measurements of the plasma density profiles and for rough estimations of the laser pulse intensity evolution in underdense plasma.

Volatile inventory and early evolution of the planetary atmospheres

NASA Astrophysics Data System (ADS)

Marov, Mikhail Ya.; Ipatov, Sergei I.

Formation of atmospheres of the inner planets involved the concurrent processes of mantle degassing and collisions that culminated during the heavy bombardment. Volatile-rich icy planetesimals impacting on the planets as a late veneer strongly contributed to the volatile inventory. Icy remnants of the outer planet accretion significantly complemented the accumulation of the lithophile and atmophile elements forced out onto the surface of the inner planets from silicate basaltic magma enriched in volatiles. Orbital dynamics of small bodies, including near-Earth asteroids, comets, and bodies from the Edgeworth-Kuiper belt evolving to become inner planet crossers, is addressed to examine different plausible amounts of volatile accretion. The relative importance of comets and chondrites in the delivery of volatiles is constrained by the observed fractionation pattern of noble gas abundances in the atmospheres of inner planets. The following development of the early atmospheres depended on the amount of volatiles expelled from the interiors and deposited by impactors, while the position of the planet relative to the Sun and its mass affected its climatic evolution.

Solar-Type Stars with the Suppression of Convection at an Early Stage of Evolution

NASA Astrophysics Data System (ADS)

Oreshina, A. V.; Baturin, V. A.; Ayukov, S. V.; Gorshkov, A. B.

2017-12-01

The evolution of a solar-mass star before and on the main sequence is analyzed in light of the diminished efficiency of convection in the first 500 Myr. A numerical simulation has been performed with the CESAM2k code. It is shown that the suppression of convection in the early stages of evolution leads to a somewhat higher lithium content than that predicted by the classical solar model. In addition, the star's effective temperature decreases. Ignoring this phenomenon may lead to errors in age and mass determinations for young stars (before the main sequence) from standard evolutionary tracks in the temperature-luminosity diagram. At a later stage of evolution, after 500 Myr, the efficiency of convection tends to the solar value. At this stage, the star's inner structure becomes classical; it does not depend on the previous history. On the contrary, the photospheric lithium abundance contains information about the star's past. In other words, there may exist main-sequence solar-mass stars of the same age (above 500 Myr), radius, and luminosity, yet with different photospheric lithium contents. The main results of this work add considerably to the popular method for determining the age of solar-type stars from lithium abundances.

Evolution of Cupido and Coahuila carbonate platforms, early Cretaceous, northeastern Mexico

USGS Publications Warehouse

Lehmann, Christoph; Osleger, David A.; Montañez, Isabel P.; Sliter, William V.; Arnaud Vanneau, Annie; Banner, Jay L.

1999-01-01

The Cupido and Coahuila platforms of northeastern Mexico are part of the extensive carbonate platform system that rimmed the ancestral Gulf of Mexico during Barremian to Albian time. Exposures of Cupido and Coahuila lithofacies in several mountain ranges spanning an ∼80000 km2 area reveal information about platform morphology and composition, paleoenvironmental relations, and the chronology of platform evolution. New biostratigraphic data, integrated with carbon and strontium isotope stratigraphy, significantly improve chronostratigraphic relations across the region. These data substantially change previous age assignments of several formations and force a revision of the longstanding stratigraphy in the region. The revised stratigraphy and enhanced time control, combined with regional facies associations, allow the construction of cross sections, isopach maps, and time-slice paleogeographic maps that collectively document platform morphology and evolution.The orientation of the Cupido (Barremian-Aptian) shelf margin was controlled by the emergent Coahuila basement block to the northwest. The south-facing margin is a high-energy grainstone shoal, whereas the margin facing the ancestral Gulf of Mexico to the east is a discontinuous rudist-coral reef. A broad shelf lagoon developed in the lee of the Cupido margin, where as much as 660 m of cyclic peritidal deposits accumulated. During middle to late Aptian time, a major phase of flooding forced a retrograde backstep of the Cupido platform, shifting the locus of shallow-marine sedimentation northwestward toward the Coahuila block. This diachronous flooding event records both the demise of the Cupido shelf and the consequent initiation of the Coahuila ramp.The backstepped Coahuila ramp (Aptian-Albian) consisted of a shallow shoal margin separating an interior evaporitic lagoon from a low-energy, muddy deep ramp. More than 500 m of cyclic carbonates and evaporites accumulated in the evaporitic lagoon during early to

Planck Early Results. XV. Spectral Energy Distributions and Radio Continuum Spectra of Northern Extragalactic Radio Sources

NASA Technical Reports Server (NTRS)

Aatrokoski, J.; Ade, P. A. R.; Aghanim, N.; Aller, H. D.; Aller, M. F.; Angelakis, E.; Amaud, M.; Ashdown, M.; Aumont, J.; Baccigalupi, C.;

Planck early results. XV. Spectral energy distributions and radio continuum spectra of northern extragalactic radio sources

DOE PAGES

Aatrokoski, J.

2011-12-01

Spectral energy distributions (SEDs) and radio continuum spectra are presented for a northern sample of 104 extragalactic radio sources, based on the Planck Early Release Compact Source Catalogue (ERCSC) and simultaneous multifrequency data. The nine Planck frequencies, from 30 to 857GHz, are complemented by a set of simultaneous observations ranging from radio to gamma-rays. This is the first extensive frequency coverage in the radio and millimetre domains for an essentially complete sample of extragalactic radio sources, and it shows how the individual shocks, each in their own phase of development, shape the radio spectra as they move in the relativisticmore » jet. The SEDs presented in this paper were fitted with second and third degree polynomials to estimate the frequencies of the synchrotron and inverse Compton (IC) peaks, and the spectral indices of low and high frequency radio data, including the Planck ERCSC data, were calculated. SED modelling methods are discussed, with an emphasis on proper, physical modelling of the synchrotron bump using multiple components. Planck ERCSC data also suggest that the original accelerated electron energy spectrum could be much harder than commonly thought, with power-law index around 1.5 instead of the canonical 2.5. The implications of this are discussed for the acceleration mechanisms effective in blazar shock. Furthermore in many cases the Planck data indicate that gamma-ray emission must originate in the same shocks that produce the radio emission.« less

RAiSE II: resolved spectral evolution in radio AGN

NASA Astrophysics Data System (ADS)

Turner, Ross J.; Rogers, Jonathan G.; Shabala, Stanislav S.; Krause, Martin G. H.

2018-01-01

The active galactic nuclei (AGN) lobe radio luminosities modelled in hydrodynamical simulations and most analytical models do not address the redistribution of the electron energies due to adiabatic expansion, synchrotron radiation and inverse-Compton scattering of cosmic microwave background photons. We present a synchrotron emissivity model for resolved sources that includes a full treatment of the loss mechanisms spatially across the lobe, and apply it to a dynamical radio source model with known pressure and volume expansion rates. The bulk flow and dispersion of discrete electron packets is represented by tracer fields in hydrodynamical simulations; we show that the mixing of different aged electrons strongly affects the spectrum at each point of the radio map in high-powered Fanaroff & Riley type II (FR-II) sources. The inclusion of this mixing leads to a factor of a few discrepancy between the spectral age measured using impulsive injection models (e.g. JP model) and the dynamical age. The observable properties of radio sources are predicted to be strongly frequency dependent: FR-II lobes are expected to appear more elongated at higher frequencies, while jetted FR-I sources appear less extended. The emerging FR0 class of radio sources, comprising gigahertz peaked and compact steep spectrum sources, can potentially be explained by a population of low-powered FR-Is. The extended emission from such sources is shown to be undetectable for objects within a few orders of magnitude of the survey detection limit and to not contribute to the curvature of the radio spectral energy distribution.

SWS2 visual pigment evolution as a test of historically contingent patterns of plumage color evolution in warblers.

PubMed

Bloch, Natasha I; Morrow, James M; Chang, Belinda S W; Price, Trevor D

2015-02-01

Distantly related clades that occupy similar environments may differ due to the lasting imprint of their ancestors-historical contingency. The New World warblers (Parulidae) and Old World warblers (Phylloscopidae) are ecologically similar clades that differ strikingly in plumage coloration. We studied genetic and functional evolution of the short-wavelength-sensitive visual pigments (SWS2 and SWS1) to ask if altered color perception could contribute to the plumage color differences between clades. We show SWS2 is short-wavelength shifted in birds that occupy open environments, such as finches, compared to those in closed environments, including warblers. Phylogenetic reconstructions indicate New World warblers were derived from a finch-like form that colonized from the Old World 15-20 Ma. During this process, the SWS2 gene accumulated six substitutions in branches leading to New World warblers, inviting the hypothesis that passage through a finch-like ancestor resulted in SWS2 evolution. In fact, we show spectral tuning remained similar across warblers as well as the finch ancestor. Results reject the hypothesis of historical contingency based on opsin spectral tuning, but point to evolution of other aspects of visual pigment function. Using the approach outlined here, historical contingency becomes a generally testable theory in systems where genotype and phenotype can be connected. © 2014 The Author(s). Evolution © 2014 The Society for the Study of Evolution.

Exploring the luminosity evolution and stellar mass assembly of 2SLAQ luminous red galaxies between redshifts 0.4 and 0.8

NASA Astrophysics Data System (ADS)

Banerji, Manda; Ferreras, Ignacio; Abdalla, Filipe B.; Hewett, Paul; Lahav, Ofer

2010-03-01

We present an analysis of the evolution of 8625 luminous red galaxies (LRGs) between z = 0.4 and 0.8 in the 2dF and Sloan Digital Sky Survey LRG and QSO (2SLAQ) survey. The LRGs are split into redshift bins and the evolution of both the luminosity and stellar mass function with redshift is considered and compared to the assumptions of a passive evolution scenario. We draw attention to several sources of systematic error that could bias the evolutionary predictions made in this paper. While the inferred evolution is found to be relatively unaffected by the exact choice of spectral evolution model used to compute K + e corrections, we conclude that photometric errors could be a source of significant bias in colour-selected samples such as this, in particular when using parametric maximum likelihood based estimators. We find that the evolution of the most massive LRGs is consistent with the assumptions of passive evolution and that the stellar mass assembly of the LRGs is largely complete by z ~ 0.8. Our findings suggest that massive galaxies with stellar masses above 1011Msolar must have undergone merging and star formation processes at a very early stage (z >~ 1). This supports the emerging picture of downsizing in both the star formation as well as the mass assembly of early-type galaxies. Given that our spectroscopic sample covers an unprecedentedly large volume and probes the most massive end of the galaxy mass function, we find that these observational results present a significant challenge for many current models of galaxy formation.

Bayesian Morphological Clock Methods Resurrect Placoderm Monophyly and Reveal Rapid Early Evolution in Jawed Vertebrates.

PubMed

King, Benedict; Qiao, Tuo; Lee, Michael S Y; Zhu, Min; Long, John A

2017-07-01

The phylogeny of early gnathostomes provides an important framework for understanding one of the most significant evolutionary events, the origin and diversification of jawed vertebrates. A series of recent cladistic analyses have suggested that the placoderms, an extinct group of armoured fish, form a paraphyletic group basal to all other jawed vertebrates. We revised and expanded this morphological data set, most notably by sampling autapomorphies in a similar way to parsimony-informative traits, thus ensuring this data (unlike most existing morphological data sets) satisfied an important assumption of Bayesian tip-dated morphological clock approaches. We also found problems with characters supporting placoderm paraphyly, including character correlation and incorrect codings. Analysis of this data set reveals that paraphyly and monophyly of core placoderms (excluding maxillate forms) are essentially equally parsimonious. The two alternative topologies have different root positions for the jawed vertebrates but are otherwise similar. However, analysis using tip-dated clock methods reveals strong support for placoderm monophyly, due to this analysis favoring trees with more balanced rates of evolution. Furthermore, enforcing placoderm paraphyly results in higher levels and unusual patterns of rate heterogeneity among branches, similar to that generated from simulated trees reconstructed with incorrect root positions. These simulations also show that Bayesian tip-dated clock methods outperform parsimony when the outgroup is largely uninformative (e.g., due to inapplicable characters), as might be the case here. The analysis also reveals that gnathostomes underwent a rapid burst of evolution during the Silurian period which declined during the Early Devonian. This rapid evolution during a period with few articulated fossils might partly explain the difficulty in ascertaining the root position of jawed vertebrates. © The Author(s) 2016. Published by Oxford University

HIV evolution in early infection: selection pressures, patterns of insertion and deletion, and the impact of APOBEC.

PubMed

Wood, Natasha; Bhattacharya, Tanmoy; Keele, Brandon F; Giorgi, Elena; Liu, Michael; Gaschen, Brian; Daniels, Marcus; Ferrari, Guido; Haynes, Barton F; McMichael, Andrew; Shaw, George M; Hahn, Beatrice H; Korber, Bette; Seoighe, Cathal

2009-05-01

The pattern of viral diversification in newly infected individuals provides information about the host environment and immune responses typically experienced by the newly transmitted virus. For example, sites that tend to evolve rapidly across multiple early-infection patients could be involved in enabling escape from common early immune responses, could represent adaptation for rapid growth in a newly infected host, or could represent reversion from less fit forms of the virus that were selected for immune escape in previous hosts. Here we investigated the diversification of HIV-1 env coding sequences in 81 very early B subtype infections previously shown to have resulted from transmission or expansion of single viruses (n = 78) or two closely related viruses (n = 3). In these cases, the sequence of the infecting virus can be estimated accurately, enabling inference of both the direction of substitutions as well as distinction between insertion and deletion events. By integrating information across multiple acutely infected hosts, we find evidence of adaptive evolution of HIV-1 env and identify a subset of codon sites that diversified more rapidly than can be explained by a model of neutral evolution. Of 24 such rapidly diversifying sites, 14 were either i) clustered and embedded in CTL epitopes that were verified experimentally or predicted based on the individual's HLA or ii) in a nucleotide context indicative of APOBEC-mediated G-to-A substitutions, despite having excluded heavily hypermutated sequences prior to the analysis. In several cases, a rapidly evolving site was embedded both in an APOBEC motif and in a CTL epitope, suggesting that APOBEC may facilitate early immune escape. Ten rapidly diversifying sites could not be explained by CTL escape or APOBEC hypermutation, including the most frequently mutated site, in the fusion peptide of gp41. We also examined the distribution, extent, and sequence context of insertions and deletions, and we provide

HIV Evolution in Early Infection: Selection Pressures, Patterns of Insertion and Deletion, and the Impact of APOBEC

PubMed Central

Wood, Natasha; Bhattacharya, Tanmoy; Keele, Brandon F.; Giorgi, Elena; Liu, Michael; Gaschen, Brian; Daniels, Marcus; Ferrari, Guido; Haynes, Barton F.; McMichael, Andrew; Shaw, George M.; Hahn, Beatrice H.; Korber, Bette; Seoighe, Cathal

2009-01-01

The pattern of viral diversification in newly infected individuals provides information about the host environment and immune responses typically experienced by the newly transmitted virus. For example, sites that tend to evolve rapidly across multiple early-infection patients could be involved in enabling escape from common early immune responses, could represent adaptation for rapid growth in a newly infected host, or could represent reversion from less fit forms of the virus that were selected for immune escape in previous hosts. Here we investigated the diversification of HIV-1 env coding sequences in 81 very early B subtype infections previously shown to have resulted from transmission or expansion of single viruses (n = 78) or two closely related viruses (n = 3). In these cases, the sequence of the infecting virus can be estimated accurately, enabling inference of both the direction of substitutions as well as distinction between insertion and deletion events. By integrating information across multiple acutely infected hosts, we find evidence of adaptive evolution of HIV-1 env and identify a subset of codon sites that diversified more rapidly than can be explained by a model of neutral evolution. Of 24 such rapidly diversifying sites, 14 were either i) clustered and embedded in CTL epitopes that were verified experimentally or predicted based on the individual's HLA or ii) in a nucleotide context indicative of APOBEC-mediated G-to-A substitutions, despite having excluded heavily hypermutated sequences prior to the analysis. In several cases, a rapidly evolving site was embedded both in an APOBEC motif and in a CTL epitope, suggesting that APOBEC may facilitate early immune escape. Ten rapidly diversifying sites could not be explained by CTL escape or APOBEC hypermutation, including the most frequently mutated site, in the fusion peptide of gp41. We also examined the distribution, extent, and sequence context of insertions and deletions, and we provide

Spectral and spread-spectral teleportation

DOE Office of Scientific and Technical Information (OSTI.GOV)

Humble, Travis S.

2010-06-15

We report how quantum information encoded into the spectral degree of freedom of a single-photon state may be teleported using a finite spectrally entangled biphoton state. We further demonstrate how the bandwidth of the teleported wave form can be controllably and coherently dilated using a spread-spectral variant of teleportation. We calculate analytical expressions for the fidelities of spectral and spread-spectral teleportation when complex-valued Gaussian states are transferred using a proposed experimental approach. Finally, we discuss the utility of these techniques for integrating broad-bandwidth photonic qubits with narrow-bandwidth receivers in quantum communication systems.

Test of multi-object exoplanet search spectral interferometer

NASA Astrophysics Data System (ADS)

Zhang, Kai; Wang, Liang; Jiang, Haijiao; Zhu, Yongtian; Hou, Yonghui; Dai, Songxin; Tang, Jin; Tang, Zhen; Zeng, Yizhong; Chen, Yi; Wang, Lei; Hu, Zhongwen

2014-07-01

Exoplanet detection, a highlight in the current astronomy, will be part of puzzle in astronomical and astrophysical future, which contains dark energy, dark matter, early universe, black hole, galactic evolution and so on. At present, most of the detected Exoplanets are confirmed through methods of radial velocity and transit. Guo shoujing Telescope well known as LAMOST is an advanced multi-object spectral survey telescope equipped with 4000 fibers and 16 low resolution fiber spectrographs. To explore its potential in different astronomical activities, a new radial velocity method named Externally Dispersed Interferometry (EDI) is applied to serve Exoplanet detection through combining a fixed-delay interferometer with the existing spectrograph in medium spectral resolution mode (R=5,000-10,000). This new technology has an impressive feature to enhance radial velocity measuring accuracy of the existing spectrograph through installing a fixed-delay interferometer in front of spectrograph. This way produces an interference spectrum with higher sensitivity to Doppler Effect by interference phase and fixed delay. This relative system named Multi-object Exoplanet Search Spectral Interferometer (MESSI) is composed of a few parts, including a pair of multi-fiber coupling sockets, a remote control iodine subsystem, a multi-object fixed delay interferometer and the existing spectrograph. It covers from 500 to 550 nm and simultaneously observes up to 21 stars. Even if it's an experimental instrument at present, it's still well demonstrated in paper that how MESSI does explore an effective way to build its own system under the existing condition of LAMOST and get its expected performance for multi-object Exoplanet detection, especially instrument stability and its special data reduction. As a result of test at lab, inside temperature of its instrumental chamber is stable in a range of +/-0.5degree Celsius within 12 hours, and the direct instrumental stability without further

Spectral classification of selected ISOGAL sources using Himalayan Chandra Telescope

NASA Astrophysics Data System (ADS)

Joshi, U. C.; Ganesh, S.; Baliyan, K. S.; Parthasarathy, M.; Schultheis, M.; Rajpurohit, A.; Simon, G.; Omont, A.

The ISOGAL survey (Omont et al. 1999) is devoted to the observation of selected regions of the Galactic plane in the mid-infrared with ISOCAM. More than 240 fields were observed at 7 and 15 micron wave-bands with ISOCAM at an angular resolution of 6'' which has provided a complete census, in the areas surveyed, of the stars in the late stages (RGB/AGB phases) of stellar evolution. Optical counterparts are detected for some of the ISOGAL sources in the directions where the extinction is relatively lower. We obtained optical spectra of ˜100 such sources with the Himalayan Chandra Telescope (HCT), India and estimated their spectral classes. Optical spectroscopy together with mid-IR data is expected to allow us to obtain the spectral-type vs mass-loss relation which are important parameters to understand the late stages of stellar evolution. In this paper, we present a set of spectra taken in the field FC97 for which ISOGAL survey is complete.

Early time evolution of negative ion clouds and electron density depletions produced during electron attachment chemical release experiments

NASA Technical Reports Server (NTRS)

Scales, W. A.; Bernhardt, P. A.; Ganguli, G.

1994-01-01

Two-dimensional electrostatic particle-in-cell simulations are used to study the early time evolution of electron depletions and negative ion clouds produced during electron attachment chemical releases in the ionosphere. The simulation model considers the evolution in the plane perpendicular to the magnetic field and a three-species plasma that contains electrons, positive ions, and also heavy negative ions that result as a by-product of the electron attachment reaction. The early time evolution (less than the negative ion cyclotron period) of the system shows that a negative charge surplus initially develops outside of the depletion boundary as the heavy negative ions move across the boundary. The electrons are initially restricted from moving into the depletion due to the magnetic field. An inhomogenous electric field develops across the boundary layer due to this charge separation. A highly sheared electron flow velocity develops in the depletion boundary due to E x B and Delta-N x B drifts that result from electron density gradients and this inhomogenous electric field. Structure eventually develops in the depletion boundary layer due to low-frequency electrostatic waves that have growth times shorter than the negative ion cyclotron period. It is proposed that these waves are most likely produced by the electron-ion hybrid instability that results from sufficiently large shears in the electron flow velocity.

The First Molecular Phylogeny of Strepsiptera (Insecta) Reveals an Early Burst of Molecular Evolution Correlated with the Transition to Endoparasitism

PubMed Central

McMahon, Dino P.; Hayward, Alexander; Kathirithamby, Jeyaraney

2011-01-01

A comprehensive model of evolution requires an understanding of the relationship between selection at the molecular and phenotypic level. We investigate this in Strepsiptera, an order of endoparasitic insects whose evolutionary biology is poorly studied. We present the first molecular phylogeny of Strepsiptera, and use this as a framework to investigate the association between parasitism and molecular evolution. We find evidence of a significant burst in the rate of molecular evolution in the early history of Strepsiptera. The evolution of morphological traits linked to parasitism is significantly correlated with the pattern in molecular rate. The correlated burst in genotypic-phenotypic evolution precedes the main phase of strepsipteran diversification, which is characterised by the return to a low and even molecular rate, and a period of relative morphological stability. These findings suggest that the transition to endoparasitism led to relaxation of selective constraint in the strepsipteran genome. Our results indicate that a parasitic lifestyle can affect the rate of molecular evolution, although other causal life-history traits correlated with parasitism may also play an important role. PMID:21738621

Hydraulics of Asteroxylon mackei, an early Devonian vascular plant, and the early evolution of water transport tissue in terrestrial plants.

PubMed

Wilson, J P; Fischer, W W

2011-03-01

The core of plant physiology is a set of functional solutions to a tradeoff between CO(2) acquisition and water loss. To provide an important evolutionary perspective on how the earliest land plants met this tradeoff, we constructed a mathematical model (constrained geometrically with measurements of fossils) of the hydraulic resistance of Asteroxylon, an Early Devonian plant. The model results illuminate the water transport physiology of one of the earliest vascular plants. Results show that Asteroxylon's vascular system contains cells with low hydraulic resistances; these resistances are low because cells were covered by scalariform pits, elliptical structures that permit individual cells to have large areas for water to pass from one cell to another. Asteroxylon could move a large amount of water quickly given its large pit areas; however, this would have left these plants particularly vulnerable to damage from excessive evapotranspiration. These results highlight a repeated pattern in plant evolution, wherein the evolution of highly conductive vascular tissue precedes the appearance of adaptations to increase water transport safety. Quantitative insight into the vascular transport of Asteroxylon also allows us to reflect on the quality of CO(2) proxy estimates based on early land plant fossils. Because Asteroxylon's vascular tissue lacked any safety features to prevent permanent damage, it probably used stomatal abundance and behavior to prevent desiccation. If correct, low stomatal frequencies in Asteroxylon reflect the need to limit evapotranspiration, rather than adaptation to high CO(2) concentrations in the atmosphere. More broadly, methods to reveal and understand water transport in extinct plants have a clear use in testing and bolstering fossil plant-based paleoclimate proxies. © 2011 Blackwell Publishing Ltd.

Toward a better understanding of nearshore meteotsunami evolution, and effective meteotsunami early-warning systems

NASA Astrophysics Data System (ADS)

Sheremet, A.; Li, C.; Shrira, V. I.

2017-12-01

We present high-resolution observations collected in 2008 on the Atcahfalaya shelf that capture the shoaling evolution of a meteotsunami (MT), including the disintegration into the train of solitons (solibore). One of the intriguing elements of this process is a spectacular 1.5-m solitary-wave (soliton), that precedes the arrival of the MT solibore by approximately 5 min, reaching the observation site propagating through a background of nearly-calm waters (20-cm height wind waves). Solitons, products of the MT disintegration process, are observed at all experiment sites, covering approx. 200 km shoreline. We interpret observations employing numerical simulations of a simplified hydrodynamic model based on the variable coefficient KdV equation. The analysis shows that observed wide-spread soliton presence and the soliton/solibore formation are the result of a complicated evolution process involving refraction, collision, and nonlinear interaction of multiple meteotsunami waves.Our results highlight the substantial lack of detail of the current picture of the nonlinear transformation of a MT from generation to its shoreline manifestation. A realistic reconstruction of MT evolution is at present almost impossible based on the current poor spatial and temporal resolution MT observations, overwhelmingly confined to the shoreline. Since the MTs tend to disintegrate into very short (down to 10s) pulses, even modern tidal gauges (1 min resolution) fail to capture essential features of its evolution. We also briefly discuss an ongoing field experiment that carries further the effort to collect high-resolution MT measurements, and that will investigate and test methodologies for early warning systems.

Early evolution of an X-ray emitting solar active region

NASA Technical Reports Server (NTRS)

Wolfson, C. J.; Acton, L. W.; Leibacher, J. W.; Roethig, D. T.

1977-01-01

The birth and early evolution of a solar active region has been investigated using X-ray observations from the mapping X-ray heliometer on board the OSO-8 spacecraft. X-ray emission is observed within three hours of the first detection of H-alpha plage. At that time, a plasma temperature of four million K in a region having a density on the order of 10 to the 10th power per cu cm is inferred. During the fifty hours following birth almost continuous flares or flare-like X-ray bursts are superimposed on a monotonically increasing base level of X-ray emission produced by the plasma. If the X-rays are assumed to result from heating due to dissipation of current systems or magnetic field reconnection, it may be concluded that flare-like X-ray emission soon after active region birth implies that the magnetic field probably emerges in a stressed or complex configuration.

Galaxy And Mass Assembly: the evolution of the cosmic spectral energy distribution from z = 1 to z = 0

NASA Astrophysics Data System (ADS)

Andrews, S. K.; Driver, S. P.; Davies, L. J. M.; Kafle, P. R.; Robotham, A. S. G.; Vinsen, K.; Wright, A. H.; Bland-Hawthorn, J.; Bourne, N.; Bremer, M.; da Cunha, E.; Drinkwater, M.; Holwerda, B.; Hopkins, A. M.; Kelvin, L. S.; Loveday, J.; Phillipps, S.; Wilkins, S.

2017-09-01

We present the evolution of the cosmic spectral energy distribution (CSED) from z = 1 to 0. Our CSEDs originate from stacking individual spectral energy distribution (SED) fits based on panchromatic photometry from the Galaxy And Mass Assembly (GAMA) and COSMOS data sets in 10 redshift intervals with completeness corrections applied. Below z = 0.45, we have credible SED fits from 100 nm to 1 mm. Due to the relatively low sensitivity of the far-infrared data, our far-infrared CSEDs contain a mix of predicted and measured fluxes above z = 0.45. Our results include appropriate errors to highlight the impact of these corrections. We show that the bolometric energy output of the Universe has declined by a factor of roughly 4 - from 5.1 ± 1.0 at z ˜ 1 to 1.3 ± 0.3 × 1035 h70 W Mpc-3 at the current epoch. We show that this decrease is robust to cosmic sample variance, the SED modelling and other various types of error. Our CSEDs are also consistent with an increase in the mean age of stellar populations. We also show that dust attenuation has decreased over the same period, with the photon escape fraction at 150 nm increasing from 16 ± 3 at z ˜ 1 to 24 ± 5 per cent at the current epoch, equivalent to a decrease in AFUV of 0.4 mag. Our CSEDs account for 68 ± 12 and 61 ± 13 per cent of the cosmic optical and infrared backgrounds, respectively, as defined from integrated galaxy counts and are consistent with previous estimates of the cosmic infrared background with redshift.

Spectral Index Properties of millijansky Radio Sources in ATLAS

NASA Astrophysics Data System (ADS)

Randall, Kate; Hopkins, A. M.; Norris, R. P.; Zinn, P.; Middelberg, E.; Mao, M. Y.; Sharp, R. G.

2012-01-01

At the faintest radio flux densities (S1.4GHz < 10 milliJansky (mJy)), the spectral index properties of radio sources are not well constrained. The bright radio source population (S1.4GHz > 10 mJy) is well studied and is predominantly comprised of AGN. At fainter flux densities, particularly into the microJansky regime, star-forming galaxies begin to dominate the radio source population. Understanding these faint radio source populations is essential for understanding galaxy evolution, and the link between AGN and star formation. Conflicting results have recently arisen regarding whether there is a flattening of the average spectral index between a low radio frequency (325 or 610 MHz) and 1.4 GHz at these faint flux densities. To explore this issue, we have investigated the spectral index properties of a new catalogue of 843 MHz radio sources in the ELAIS-S1 (the European Large Area ISO Survey - South 1 Region) field. Our results support previous work showing a tendency towards flatter radio spectra at fainter flux densities. This catalogue is cross-matched to the Australia Telescope Large Area Survey (ATLAS), the widest deep radio survey to date at 1.4 GHz, with complementary 2.3 GHz, optical and infrared Spitzer Wide-area Infra-Red Extragalactic data. The variation of spectral index properties have been explored as a function of redshift, luminosity and flux density. [These new measurements have been used to identify a population of faint Compact Steep Spectrum sources, thought to be one of the earliest stages of the AGN life-cycle. Exploring this population will aid us in understanding the evolution of AGN as a whole.

Three neuropeptide Y receptor genes in the spiny dogfish, Squalus acanthias, support en bloc duplications in early vertebrate evolution.

PubMed

Salaneck, Erik; Ardell, David H; Larson, Earl T; Larhammar, Dan

2003-08-01

It has been debated whether the increase in gene number during early vertebrate evolution was due to multiple independent gene duplications or synchronous duplications of many genes. We describe here the cloning of three neuropeptide Y (NPY) receptor genes belonging to the Y1 subfamily in the spiny dogfish, Squalus acanthias, a cartilaginous fish. The three genes are orthologs of the mammalian subtypes Y1, Y4, and Y6, which are located in paralogous gene regions on different chromosomes in mammals. Thus, these genes arose by duplications of a chromosome region before the radiation of gnathostomes (jawed vertebrates). Estimates of duplication times from linearized trees together with evidence from other gene families supports two rounds of chromosome duplications or tetraploidizations early in vertebrate evolution. The anatomical distribution of mRNA was determined by reverse-transcriptase PCR and was found to differ from mammals, suggesting differential functional diversification of the new gene copies during the radiation of the vertebrate classes.

Workshop on Early Crustal Genesis: Implications from Earth

NASA Technical Reports Server (NTRS)

Phinney, W. C. (Compiler)

1981-01-01

Ways to foster increased study of the early evolution of the Earth, considering the planet as a whole, were explored and recommendations were made to NASA with the intent of exploring optimal ways for integrating Archean studies with problems of planetary evolution. Major themes addressed include: (1) Archean contribution to constraints for modeling planetary evolution; (2) Archean surface conditions and processes as clues to early planetary history; and (3) Archean evidence for physical, chemical and isotopic transfer processes in early planetary crusts. Ten early crustal evolution problems are outlined.

Early human communication helps in understanding language evolution.

PubMed

Lenti Boero, Daniela

2014-12-01

Building a theory on extant species, as Ackermann et al. do, is a useful contribution to the field of language evolution. Here, I add another living model that might be of interest: human language ontogeny in the first year of life. A better knowledge of this phase might help in understanding two more topics among the "several building blocks of a comprehensive theory of the evolution of spoken language" indicated in their conclusion by Ackermann et al., that is, the foundation of the co-evolution of linguistic motor skills with the auditory skills underlying speech perception, and the possible phylogenetic interactions of protospeech production with referential capabilities.

The early evolution of protostellar disks

NASA Technical Reports Server (NTRS)

Stahler, Steven W.; Korycansky, D. G.; Brothers, Maxwell J.; Touma, Jihad

1994-01-01

We consider the origin and intital growth of the disks that form around protostars during the collapse of rotating molecular cloud cores. These disks are assumed to be inviscid and pressure free, and to have masses small compared to those of their central stars. We find that there exist three distinct components-an outer disk, in which shocked gas moves with comparable azimuthal and radical velocities; and inner disk, where material follows nearly circular orbits, but spirals slowly toward the star because of the drag exerted by adjacent onfalling matter, and a turbulent ring adjoining the first two regions. Early in the evolution, i.e., soon after infalling matter begins to miss the star, only the outer disk is present, and the total mass acceration rate onto the protostar is undiminished. Once the outer disk boundary grows to more than 2.9 times the stellar radius, first the ring, and then the inner disk appear. Thereafter, the radii of all three components expand as t(exp 3). The mass of the ring increase with time and is always 13% of the total mass that has fallen from the cloud. Concurrently with the buildup of the inner disk and ring, the accretion rate onto the star falls off. However, the protostellar mass continue to rise, asymptotically as t(exp 1/4). We calculated the radiated flux from the inner and outer disk components due to the release of gravitational potential energy. The flux from the inner disk is dominant and rises steeply toward the stellar surface. We also determine the surface temperature of the inner disk as a function of radius. The total disk luminosity decreases slowly with time, while the contributions from the ring and inner disk both fall as t(exp -2).

The Eagle Nebula: a spectral template for star forming regions

NASA Astrophysics Data System (ADS)

Flagey, Nicolas; Boulanger, Francois; Carey, Sean; Compiegne, Mathieu; Dwek, Eli; Habart, Emilie; Indebetouw, Remy; Montmerle, Thierry; Noriega-Crespo, Alberto

2008-03-01

IRAC and MIPS have revealed spectacular images of massive star forming regions in the Galaxy. These vivid illustrations of the interaction between the stars, through their winds and radiation, and their environment, made of gas and dust, still needs to be explained. The large scale picture of layered shells of gas components, is affected by the small scale interaction of stars with the clumpy medium that surrounds them. To understand spatial variations of physical conditions and dust properties on small scales, spectroscopic imaging observations are required on a nearby object. The iconic Eagle Nebula (M16) is one of the nearest and most observed star forming region of our Galaxy and as such, is a well suited template to obtain this missing data set. We thus propose a complete spectral map of the Eagle Nebula (M16) with the IRS/Long Low module (15-38 microns) and MIPS/SED mode (55-95 microns). Analysis of the dust emission, spectral features and continuum, and of the H2 and fine-structure gas lines within our models will provide us with constraints on the physical conditions (gas ionization state, pressure, radiation field) and dust properties (temperature, size distribution) at each position within the nebula. Only such a spatially and spectrally complete map will allow us to characterize small scale structure and dust evolution within the global context and understand the impact of small scale structure on the evolution of dusty star forming regions. This project takes advantage of the unique ability of IRS at obtaining sensitive spectral maps covering large areas.

Complementary shifts in photoreceptor spectral tuning unlock the full adaptive potential of ultraviolet vision in birds

PubMed Central

Toomey, Matthew B; Lind, Olle; Frederiksen, Rikard; Curley, Robert W; Riedl, Ken M; Wilby, David; Schwartz, Steven J; Witt, Christopher C; Harrison, Earl H; Roberts, Nicholas W; Vorobyev, Misha; McGraw, Kevin J; Cornwall, M Carter; Kelber, Almut; Corbo, Joseph C

2016-01-01

Color vision in birds is mediated by four types of cone photoreceptors whose maximal sensitivities (λmax) are evenly spaced across the light spectrum. In the course of avian evolution, the λmax of the most shortwave-sensitive cone, SWS1, has switched between violet (λmax > 400 nm) and ultraviolet (λmax < 380 nm) multiple times. This shift of the SWS1 opsin is accompanied by a corresponding short-wavelength shift in the spectrally adjacent SWS2 cone. Here, we show that SWS2 cone spectral tuning is mediated by modulating the ratio of two apocarotenoids, galloxanthin and 11’,12’-dihydrogalloxanthin, which act as intracellular spectral filters in this cell type. We propose an enzymatic pathway that mediates the differential production of these apocarotenoids in the avian retina, and we use color vision modeling to demonstrate how correlated evolution of spectral tuning is necessary to achieve even sampling of the light spectrum and thereby maintain near-optimal color discrimination. DOI: http://dx.doi.org/10.7554/eLife.15675.001 PMID:27402384

A revision of Sanpasaurus yaoi Young, 1944 from the Early Jurassic of China, and its relevance to the early evolution of Sauropoda (Dinosauria)

PubMed Central

Upchurch, Paul; Mannion, Philip D.; Sullivan, Corwin; Butler, Richard J.

2016-01-01

The Early Jurassic of China has long been recognized for its diverse array of sauropodomorph dinosaurs. However, the contribution of this record to our understanding of early sauropod evolution is complicated by a dearth of information on important transitional taxa. We present a revision of the poorly known taxon Sanpasaurus yaoi Young, 1944 from the late Early Jurassic Ziliujing Formation of Sichuan Province, southwest China. Initially described as the remains of an ornithopod ornithischian, we demonstrate that the material catalogued as IVPP V156 is unambiguously referable to Sauropoda. Although represented by multiple individuals of equivocal association, Sanpasaurus is nonetheless diagnosable with respect to an autapomorphic feature of the holotypic dorsal vertebral series. Additional material thought to be collected from the type locality is tentatively referred to Sanpasaurus. If correctly attributed, a second autapomorphy is present in a referred humerus. The presence of a dorsoventrally compressed pedal ungual in Sanpasaurus is of particular interest, with taxa possessing this typically ‘vulcanodontid’ character exhibiting a much broader geographic distribution than previously thought. Furthermore, the association of this trait with other features of Sanpasaurus that are broadly characteristic of basal eusauropods underscores the mosaic nature of the early sauropod–eusauropod transition. Our revision of Sanpasaurus has palaeobiogeographic implications for Early Jurassic sauropods, with evidence that the group maintained a cosmopolitan Pangaean distribution. PMID:27781168

Running of scalar spectral index in multi-field inflation

DOE Office of Scientific and Technical Information (OSTI.GOV)

Gong, Jinn-Ouk, E-mail: jinn-ouk.gong@apctp.org

We compute the running of the scalar spectral index in general multi-field slow-roll inflation. By incorporating explicit momentum dependence at the moment of horizon crossing, we can find the running straightforwardly. At the same time, we can distinguish the contributions from the quasi de Sitter background and the super-horizon evolution of the field fluctuations.

Visual Pigments, Ocular Filters and the Evolution of Snake Vision.

PubMed

Simões, Bruno F; Sampaio, Filipa L; Douglas, Ronald H; Kodandaramaiah, Ullasa; Casewell, Nicholas R; Harrison, Robert A; Hart, Nathan S; Partridge, Julian C; Hunt, David M; Gower, David J

2016-10-01

Much of what is known about the molecular evolution of vertebrate vision comes from studies of mammals, birds and fish. Reptiles (especially snakes) have barely been sampled in previous studies despite their exceptional diversity of retinal photoreceptor complements. Here, we analyze opsin gene sequences and ocular media transmission for up to 69 species to investigate snake visual evolution. Most snakes express three visual opsin genes (rh1, sws1, and lws). These opsin genes (especially rh1 and sws1) have undergone much evolutionary change, including modifications of amino acid residues at sites of known importance for spectral tuning, with several tuning site combinations unknown elsewhere among vertebrates. These changes are particularly common among dipsadine and colubrine "higher" snakes. All three opsin genes are inferred to be under purifying selection, though dN/dS varies with respect to some lineages, ecologies, and retinal anatomy. Positive selection was inferred at multiple sites in all three opsins, these being concentrated in transmembrane domains and thus likely to have a substantial effect on spectral tuning and other aspects of opsin function. Snake lenses vary substantially in their spectral transmission. Snakes active at night and some of those active by day have very transmissive lenses, whereas some primarily diurnal species cut out shorter wavelengths (including UVA). In terms of retinal anatomy, lens transmission, visual pigment spectral tuning and opsin gene evolution the visual system of snakes is exceptionally diverse compared with all other extant tetrapod orders. © The Author 2016. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

Evolution of Late-type Galaxies in a Cluster Environment: Effects of High-speed Multiple Encounters with Early-type Galaxies

NASA Astrophysics Data System (ADS)

Hwang, Jeong-Sun; Park, Changbom; Banerjee, Arunima; Hwang, Ho Seong

2018-04-01

Late-type galaxies falling into a cluster would evolve being influenced by the interactions with both the cluster and the nearby cluster member galaxies. Most numerical studies, however, tend to focus on the effects of the former with little work done on those of the latter. We thus perform a numerical study on the evolution of a late-type galaxy interacting with neighboring early-type galaxies at high speed using hydrodynamic simulations. Based on the information obtained from the Coma cluster, we set up the simulations for the case where a Milky Way–like late-type galaxy experiences six consecutive collisions with twice as massive early-type galaxies having hot gas in their halos at the closest approach distances of 15–65 h ‑1 kpc at the relative velocities of 1500–1600 km s‑1. Our simulations show that the evolution of the late-type galaxy can be significantly affected by the accumulated effects of the high-speed multiple collisions with the early-type galaxies, such as on cold gas content and star formation activity of the late-type galaxy, particularly through the hydrodynamic interactions between cold disk and hot gas halos. We find that the late-type galaxy can lose most of its cold gas after the six collisions and have more star formation activity during the collisions. By comparing our simulation results with those of galaxy–cluster interactions, we claim that the role of the galaxy–galaxy interactions on the evolution of late-type galaxies in clusters could be comparable with that of the galaxy–cluster interactions, depending on the dynamical history.

Inception and Early Evolution of the Aleutian Arc

NASA Astrophysics Data System (ADS)

Bezard, R.; Hoernle, K.; Hauff, F.; Portnyagin, M.; Werner, R.; Yogodzinski, G.; Jicha, B.; Garbe-Schönberg, D.; Turner, S.; Schaefer, B. F.

2017-12-01

Constraining the timing and style of subduction initiation in the Aleutian system is critical to model the Cenozoic geodynamic evolution of the Pacific. Until now, the oldest ages for the Aleutian arc suggest a subduction inception at c.a. 46-47 Ma. However, the compositions of these samples (arc tholeiites and calc-alkaline rocks) are different from those of typical early-arc sequences found at extensively studied subduction systems (Izu-Bonin-Mariana), dominated by FABs and boninites. Thus, if the FAB/boninite model applies to the Aleutian, the oldest units might not have been recovered yet and the arc inception could have occurred earlier than 47 Ma. To test this hypothesis, we have sampled the lowermost submarine Aleutian sequences at ten forearc and rear-arc localities during the R/V SONNE Cruise 249. We present preliminary whole-rock major and trace element concentrations, Sr-Nd-Hf-Pb isotopes as well as U-Pb zircon dating on the recovered igneous rocks. The sample compositions range from tholeiitic to calc-alkaline. No boninites were found. Most of the samples show strong subduction signatures. However, the remaining rocks present no or minor arc-type trace element features. These samples are either depleted tholeiites with similar trace element characteristics to FABs or enriched calc-alkaline rocks. Preliminary zircon dating suggests an age of 47.2 ± 1.2 Ma for one of the samples with strong arc signatures, consistent with the oldest published ages for the Aleutian so far. However, based on their compositional similarities to FABs, the depleted tholeiites should be older than the arc-type rocks, suggesting that subduction initiation could have occurred earlier than the above-mentioned age. The absence of boninite could either reflect an incomplete sampling of the early-arc sequences or a different initiation style compared to other Pacific subduction zones. Further ages and radiogenic isotope data should refine these interpretations.

Different Origins or Different Evolutions? Decoding the Spectral Diversity Among C-type Asteroids

NASA Astrophysics Data System (ADS)

Vernazza, P.; Castillo-Rogez, J.; Beck, P.; Emery, J.; Brunetto, R.; Delbo, M.; Marsset, M.; Marchis, F.; Groussin, O.; Zanda, B.; Lamy, P.; Jorda, L.; Mousis, O.; Delsanti, A.; Djouadi, Z.; Dionnet, Z.; Borondics, F.; Carry, B.

2017-02-01

Anhydrous pyroxene-rich interplanetary dust particles (IDPs) have been proposed as surface analogs for about two-thirds of all C-complex asteroids. However, this suggestion appears to be inconsistent with the presence of hydrated silicates on the surfaces of some of these asteroids, including Ceres. Here, we report the presence of enstatite (pyroxene) on the surface of two C-type asteroids (Ceres and Eugenia) based on their spectral properties in the mid-infrared range. The presence of this component is particularly unexpected in the case of Ceres, because most thermal evolution models predict a surface consisting of hydrated compounds only. The most plausible scenario is that Ceres’ surface has been partially contaminated by exogenous enstatite-rich material, possibly coming from the Beagle asteroid family. This scenario questions a similar origin for Ceres and the remaining C-types, and it possibly supports recent results obtained by the Dawn mission (NASA) that Ceres may have formed in the very outer solar system. Concerning the smaller D ˜ 200 km C-types such as Eugenia, both their derived surface composition (enstatite and amorphous silicates) and low density (<1.5 g cm-3) suggest that these bodies accreted from the same building blocks, namely chondritic porous, pyroxene-rich IDPs and volatiles (mostly water ice), and that a significant volume fraction of these bodies has remained unaffected by hydrothermal activity likely implying a late accretion. In addition, their current heliocentric distance may best explain the presence or absence of water ice at their surfaces. Finally, we raise the possibility that CI chondrites, Tagish-Lake-like material, or hydrated IDPs may be representative samples of the cores of these bodies.

Chemical evolution and the preservation of organic compounds on Mars

NASA Technical Reports Server (NTRS)

Kanavarioti, Anastassia; Mancinelli, Rocco L.

1989-01-01

Several lines of evidence suggest that the environment on early Mars and early Earth were very similar. Since life is abundant on Earth, it seems likely that conditions on early Earth were conducive to chemical evolution and the origin of life. The similarity between early Mars and early Earth encourages the hypothesis that chemical evolution might have also occurred on Mars, but that decreasing temperatures and the loss of its atmosphere brought the evolution to a halt. The possibility of finding on Mars remnants of organic material dating back to this early clement period is addressed.

New Postcranial Material of the Early Caseid Casea broilii Williston, 1910 (Synapsida: Caseidae) with a Review of the Evolution of the Sacrum in Paleozoic Non-Mammalian Synapsids

PubMed Central

LeBlanc, Aaron R. H.; Reisz, Robert R.

2014-01-01

Here we use the description of a new specimen of the small caseid synapsid Casea broilii that preserves the sacral, pelvic and hind limb regions in great detail and in three dimensions, as a unique opportunity to reevaluate the early stages in the evolution of the sacrum in the lineage that led to mammals. We place this new material in the context of sacral evolution in early caseid synapsids and conclude that the transition from two to three sacral vertebrae occurred in small-bodied species, suggesting that it was not an adaptation to heavy weight bearing. Furthermore, we compare descriptions of sacral anatomy among known early synapsids, including caseids, ophiacodontids, edaphosaurids, varanopids, and sphenacodontians and review sacral evolution in early synapsids. Based on the descriptions of new species of caseids, edaphosaurids, and varanopids over the past several decades, it is clear that a sacrum consisting of three vertebrae evolved independently at least four times in synapsids during the Late Carboniferous and Early Permian. Furthermore, similarities in the morphologies of the sacral vertebrae and ribs of these early synapsids lead us to conclude that an anterior caudal vertebra had been incorporated into the sacral series convergently in these groups. Given the repeated acquisition of a three-vertebra sacrum in early synapsids and no apparent link to body size, we argue that this sacral anatomy was related to more efficient terrestrial locomotion than to increased weight bearing. PMID:25545624

Insights into the early evolution of animal calcium signaling machinery: A unicellular point of view

PubMed Central

Cai, Xinjiang; Wang, Xiangbing; Patel, Sandip; Clapham, David E.

2014-01-01

The basic principles of Ca2+ regulation emerged early in prokaryotes. Ca2+ signaling acquired more extensive and varied functions when life evolved into multicellular eukaryotes with intracellular organelles. Animals, fungi and plants display differences in the mechanisms that control cytosolic Ca2+ concentrations. The aim of this review is to examine recent findings from comparative genomics of Ca2+ signaling molecules in close unicellular relatives of animals and in common unicellular ancestors of animals and fungi. Also discussed are the evolution and origins of the sperm-specific CatSper channel complex, cation/Ca2+ exchangers and four-domain voltage-gated Ca2+ channels. Newly identified evolutionary evidence suggests that the distinct Ca2+ signaling machineries in animals, plants and fungi likely originated from an ancient Ca2+ signaling machinery prior to early eukaryotic radiation. PMID:25498309

Insights into the early evolution of animal calcium signaling machinery: a unicellular point of view.

PubMed

Cai, Xinjiang; Wang, Xiangbing; Patel, Sandip; Clapham, David E

2015-03-01

The basic principles of Ca(2+) regulation emerged early in prokaryotes. Ca(2+) signaling acquired more extensive and varied functions when life evolved into multicellular eukaryotes with intracellular organelles. Animals, fungi and plants display differences in the mechanisms that control cytosolic Ca(2+) concentrations. The aim of this review is to examine recent findings from comparative genomics of Ca(2+) signaling molecules in close unicellular relatives of animals and in common unicellular ancestors of animals and fungi. Also discussed are the evolution and origins of the sperm-specific CatSper channel complex, cation/Ca(2+) exchangers and four-domain voltage-gated Ca(2+) channels. Newly identified evolutionary evidence suggests that the distinct Ca(2+) signaling machineries in animals, plants and fungi likely originated from an ancient Ca(2+) signaling machinery prior to early eukaryotic radiation. Copyright © 2014 Elsevier Ltd. All rights reserved.

Spectral gamuts and spectral gamut mapping

NASA Astrophysics Data System (ADS)

Rosen, Mitchell R.; Derhak, Maxim W.

2006-01-01

All imaging devices have two gamuts: the stimulus gamut and the response gamut. The response gamut of a print engine is typically described in CIE colorimetry units, a system derived to quantify human color response. More fundamental than colorimetric gamuts are spectral gamuts, based on radiance, reflectance or transmittance units. Spectral gamuts depend on the physics of light or on how materials interact with light and do not involve the human's photoreceptor integration or brain processing. Methods for visualizing a spectral gamut raise challenges as do considerations of how to utilize such a data-set for producing superior color reproductions. Recent work has described a transformation of spectra reduced to 6-dimensions called LabPQR. LabPQR was designed as a hybrid space with three explicit colorimetric axes and three additional spectral reconstruction axes. In this paper spectral gamuts are discussed making use of LabPQR. Also, spectral gamut mapping is considered in light of the colorimetric-spectral duality of the LabPQR space.

On the temporal evolution of long-wavelength mantle structure of the Earth since the early Paleozoic

NASA Astrophysics Data System (ADS)

Zhong, Shijie; Rudolph, Maxwell L.

2015-05-01

The seismic structure of the Earth's lower mantle is characterized by a dominantly degree-2 pattern with the African and Pacific large low shear velocity provinces (i.e., LLSVP) that are separated by circum-Pacific seismically fast anomalies. It is important to understand the origin of such a degree-2 mantle structure and its temporal evolution. In this study, we investigated the effects of plate motion history and mantle viscosity on the temporal evolution of the lower mantle structure since the early Paleozoic by formulating 3-D spherical shell models of thermochemical convection. For convection models with realistic mantle viscosity and no initial structure, it takes about ˜50 Myr to develop dominantly degree-2 lower mantle structure using the published plate motion models for the last either 120 Ma or 250 Ma. However, it takes longer time to develop the mantle structure for more viscous mantle. While the circum-Pangea subduction in plate motion history models promotes the formation of degree-2 mantle structure, the published pre-Pangea plate motions before 330 Ma produce relatively cold lower mantle in the African hemisphere and significant degree-1 structure in the early Pangea (˜300 Ma) or later times, even if the lower mantle has an initially degree-2 structure and a viscosity as high as 1023 Pas. This suggests that the African LLSVP may not be stationary since the early Paleozoic. With the published plate motion models and lower mantle viscosity of 1022 Pas, our mantle convection models suggest that the present-day degree-2 mantle structure may have largely been formed by ˜200 Ma.

The physics of massive OB stars in different parent galaxies. 1: Ultraviolet and optical spectral morphology in the Magellanic Clouds

NASA Technical Reports Server (NTRS)

Walborn, Nolan R.; Lennon, Daniel J.; Haser, Stephan M.; Kudritzki, Rolf-Peter; Voels, Stephen A.

1995-01-01

Hubble Space Telescope/Faint Object Spectrograph (HST/FOS) and European Space Observatory (ESO) 3.6-m/CASPEC observations have been made of 18 stars ranging in spectral type from O3 through B0.5 Ia, half of them in each of the Large and Small Magellanic Clouds, in order to investigate massive stellar winds and evolution as a function of metallicity. The spectroscopic data are initially presented and described here in an atlas format. The relative weakness of the stellar-wind features in the SMC early O V spectra, due to their metal deficiency, is remarkable. Because of their unsaturated profiles, discrete absorption components can be detected in many of them, which is generally not possible in LMC and Galactic counterparts at such early types, or even in SMC giants and supergiants. On the other hand, an O3 III spectrum in the SMC has a weak C IV but strong N V wind profile, possibly indicating the presence of processed material. Wind terminal velocities are also given and intercompared between similar spectral types in the two galaxies. In general, the terminal velocities of the SMC stars are smaller, in qualitative agreement with the predictions of radiation-driven wind theory. Further analyses in progress will provide atmospheric and wind parameters for these stars, which will be relevant to evolutionary models and the interpretation of composite starburst spectra.

Sixth Symposium on Chemical Evolution and the Origin and Evolution of Life

NASA Technical Reports Server (NTRS)

Acevedo, Sara (Editor); DeVincenzi, Donald L. (Editor); Chang, Sherwood (Editor)

1998-01-01

The 6th Symposium on Chemical Evolution and the Origin and Evolution of Life was convened at NASA Ames Research Center, November 17-20, 1997. This Symposium is convened every three years under the auspices of NASA's Exobiology Program Office. All Principal Investigators funded by this Program present their most recent research accomplishments at the Symposium. Scientific papers were presented in the following areas: cosmic evolution of the biogenic elements, prebiotic evolution (both planetary and chemical), evolution of early organisms and evolution of organisms in extreme environments, solar system exploration, and star and planet formation. The Symposium was attended by over 200 scientists from NASA centers and Universities nationwide.

Pattern recognition in volcano seismology - Reducing spectral dimensionality

NASA Astrophysics Data System (ADS)

Unglert, K.; Radic, V.; Jellinek, M.

2015-12-01

Variations in the spectral content of volcano seismicity can relate to changes in volcanic activity. Low-frequency seismic signals often precede or accompany volcanic eruptions. However, they are commonly manually identified in spectra or spectrograms, and their definition in spectral space differs from one volcanic setting to the next. Increasingly long time series of monitoring data at volcano observatories require automated tools to facilitate rapid processing and aid with pattern identification related to impending eruptions. Furthermore, knowledge transfer between volcanic settings is difficult if the methods to identify and analyze the characteristics of seismic signals differ. To address these challenges we evaluate whether a machine learning technique called Self-Organizing Maps (SOMs) can be used to characterize the dominant spectral components of volcano seismicity without the need for any a priori knowledge of different signal classes. This could reduce the dimensions of the spectral space typically analyzed by orders of magnitude, and enable rapid processing and visualization. Preliminary results suggest that the temporal evolution of volcano seismicity at Kilauea Volcano, Hawai`i, can be reduced to as few as 2 spectral components by using a combination of SOMs and cluster analysis. We will further refine our methodology with several datasets from Hawai`i and Alaska, among others, and compare it to other techniques.

A Conversational Mass Spectral Search System. IV. The Evolution of a System for the Retrieval of Mass Spectral Information

ERIC Educational Resources Information Center

Heller, Stephen R.; And Others

1973-01-01

A prototype of an interactive, conversational mass spectral search system, developed at the National Institutes of Health, has been tested since September 1971 and is now being used by more than 200 scientists in the U.S. and Canada, and will soon be used by the international mass spectrometry community. (17 references) (SJ)

Biologist Edwin Grant Conklin and the idea of the religious direction of human evolution in the early 1920s.

PubMed

Pavuk, Alexander

2017-01-01

Edwin Grant Conklin, renowned US embryologist and evolutionary popularizer, publicly advocated a social vision of evolution that intertwined science and modernist Protestant theology in the early 1920s. The moral prestige of professional science in American culture - along with Conklin's own elite scientific status - diverted attention from the frequency with which his work crossed boundaries between natural science, religion and philosophy. Writing for broad audiences, Conklin was one of the most significant of the religious and modernist biological scientists whose rhetoric went well beyond simply claiming that certain kinds of religion were amenable to evolutionary science; he instead incorporated religion itself into evolution's broadest workings. A sampling of Conklin's widely-resonant discourse suggests that there was substantially more to the religion-evolution story in the 1920s US than many creationist-centred narratives of the era imply.

Investigations of spectral separability of small grains, early season wheat detection, and multicrop inventory planning. [North Dakota and Kansas

NASA Technical Reports Server (NTRS)

Nalepka, R. F. (Principal Investigator); Malila, W. A.; Gleason, J. M.

1977-01-01

The author has identified the following significant results. LANDSAT data from seven 5 by 6 segments having crop type information were analyzed to determine the potential for spectral separation of spring wheat from other small grains as an alternative to the primary LACIE procedure for estimating spring wheat acreage. Within segment field-center, classification accuracies for spring wheat vs. barley tended to be best in mid-July when crop color changes were in progress. When correlations were made for differences in atmospheric haze, data from several segments could be aggregated, and results that approached within segment accuracies were obtained for selected dates. LACIE field measurement spectral reflectance data provided information on both wheat development patterns and the importance of various agronomic factors on wheat reflectance, the most important being availability of soil moisture. To investigate early season detection for winter wheat, reflectance of developing wheat patterns was simulated through reflectance modeling and was analyzed along with field measured reflectance from a Kansas site. The green component development of the wheat field was analyzed as a function of data throughout the season. A selected threshold was not crossed by all fields until mid-April. These reflectance data were shown to be consistent actual LANDSAT data.

Towards a High-resolution Time Scale for the Early Devonian

NASA Astrophysics Data System (ADS)

Dekkers, M. J.; da Silva, A. C.

2017-12-01

High-resolution time scales are crucial to understand Earth's history in detail. The construction of a robust geological time scale, however, inevitably becomes increasingly harder further back in time. Uncertainties associated with anchor radiometric ages increase in size, not speaking of the mere presence of suitable datable strata. However, durations of stages can be tightly constrained by making use of cyclic expressions in sediments, an approach that revolutionized the Cenozoic time scale. When precisely determined durations are stitched together, ultimately, a very precise time scale is the result. For the Mesozoic and Paleozoic an astronomical solution as a tuning target is not available but the dominant periods of eccentricity, obliquity and precession are reasonably well constrained for the entire Phanerozoic which enables their detection by means of spectral analysis. Eccentricity is time-invariant and is used as the prime building block. Here we focus on the Early Devonian, on its lowermost three stages: the Lochkovian, Pragian and Emsian. The uncertainties on the Devonian stage boundaries are currently in the order of several millions of years. The preservation of climatic cycles in diagenetically or even anchimetamorphically affected successions, however, is essential. The fit of spectral peak ratios with those calculated for orbital cycles, is classically used as a strong argument for a preserved climatic signal. Here we use primarily the low field magnetic susceptibility (MS) as proxy parameter, supported by gamma-ray spectrometry to test for consistency. Continuous Wavelet Transform, Evolutive Harmonic Analysis, Multitaper Method, and Average Spectral Misfit are used to reach an optimal astronomical interpretation. We report on classic Early Devonian sections from the Czech Republic: the Pozar-CS (Lochkovian and Pragian), Pod Barrandovem (Pragian and Lower Emsian), and Zlichov (Middle-Upper Emsian). Also a Middle-Upper Emsian section from the US

A First-Principles Model of Early Evolution: Emergence of Gene Families, Species, and Preferred Protein Folds

PubMed Central

Zeldovich, Konstantin B; Chen, Peiqiu; Shakhnovich, Boris E; Shakhnovich, Eugene I

2007-01-01

In this work we develop a microscopic physical model of early evolution where phenotype—organism life expectancy—is directly related to genotype—the stability of its proteins in their native conformations—which can be determined exactly in the model. Simulating the model on a computer, we consistently observe the “Big Bang” scenario whereby exponential population growth ensues as soon as favorable sequence–structure combinations (precursors of stable proteins) are discovered. Upon that, random diversity of the structural space abruptly collapses into a small set of preferred proteins. We observe that protein folds remain stable and abundant in the population at timescales much greater than mutation or organism lifetime, and the distribution of the lifetimes of dominant folds in a population approximately follows a power law. The separation of evolutionary timescales between discovery of new folds and generation of new sequences gives rise to emergence of protein families and superfamilies whose sizes are power-law distributed, closely matching the same distributions for real proteins. On the population level we observe emergence of species—subpopulations that carry similar genomes. Further, we present a simple theory that relates stability of evolving proteins to the sizes of emerging genomes. Together, these results provide a microscopic first-principles picture of how first-gene families developed in the course of early evolution. PMID:17630830

A first-principles model of early evolution: emergence of gene families, species, and preferred protein folds.

PubMed

Zeldovich, Konstantin B; Chen, Peiqiu; Shakhnovich, Boris E; Shakhnovich, Eugene I

2007-07-01

In this work we develop a microscopic physical model of early evolution where phenotype--organism life expectancy--is directly related to genotype--the stability of its proteins in their native conformations-which can be determined exactly in the model. Simulating the model on a computer, we consistently observe the "Big Bang" scenario whereby exponential population growth ensues as soon as favorable sequence-structure combinations (precursors of stable proteins) are discovered. Upon that, random diversity of the structural space abruptly collapses into a small set of preferred proteins. We observe that protein folds remain stable and abundant in the population at timescales much greater than mutation or organism lifetime, and the distribution of the lifetimes of dominant folds in a population approximately follows a power law. The separation of evolutionary timescales between discovery of new folds and generation of new sequences gives rise to emergence of protein families and superfamilies whose sizes are power-law distributed, closely matching the same distributions for real proteins. On the population level we observe emergence of species--subpopulations that carry similar genomes. Further, we present a simple theory that relates stability of evolving proteins to the sizes of emerging genomes. Together, these results provide a microscopic first-principles picture of how first-gene families developed in the course of early evolution.

Deployment and early results from the CanSIM (Canadian Solar Spectral Irradiance Meter) network

NASA Astrophysics Data System (ADS)

Tatsiankou, Viktar; Hinzer, Karin; Schriemer, Henry; McVey-White, Patrick; Beal, Richard

2017-09-01

Three of seven stations have been deployed as part of the Canadian Solar Spectral Irradiance (CanSIM) network situated in Ottawa, Varennes and Egbert to measure long term spectral variation of the direct normal (DNI) and global horizontal irradiances (GHI) across the country. Every station is equipped with a solar tracker, SolarSIM-D2+, SolarSIM-G+, and SR20 pyranometer, reporting the spectral DNI, GHI, diffuse horizontal irradiance (DHI) and aerosol optical depth in the 280-4000 nm range, broadband DNI, GHI, and DHI, atmospheric total column ozone and water vapour amounts. The spectral GHI as measured by the SolarSIM-G+ was within 5% as compared to EKO MS-700 spectroradiometer in 350-1050 nm range on 17 March 2017. The difference in the GHI as reported by SolarSIM-G+ and SR20 pyranometer from all stations was within 2% on 14 April 2017. Furthermore, on this day, the daily GHI sum for the Ottawa, Varennes, and Egbert stations was 7.01, 6.95, and 7.11 kWh/m2, respectively, while the daily DNI sum was 10.65, 10.86, 10.04 kWh/m2, respectively.

Disease evolution in late-onset and early-onset systemic lupus erythematosus.

PubMed

Aljohani, R; Gladman, D D; Su, J; Urowitz, M B

2017-10-01

Objective The objective of this study was to compare clinical features, disease activity, and outcome in late-onset versus early-onset systemic lupus erythematosus (SLE) over 5 years of follow up Method Patients with SLE since 1970 were followed prospectively according to standard protocol and tracked on a computerized database. Patients entering the cohort within one year of diagnosis constitute the inception cohort. Patients with late-onset (age at diagnosis ≥50) disease were identified and matched 1:2 based on gender and first clinic visit (±5) years with patients with early-onset disease (age at diagnosis 18-40 years). Results A total of 86 patients with late-onset disease (84.9% female, 81.4% Caucasian, mean age at SLE diagnosis ± SD 58.05 ± 7.30) and 169 patients with early-onset disease (86.4% female, 71% Caucasian, mean age at SLE diagnosis ± SD 27.80 ± 5.90) were identified. At enrollment, late-onset SLE patients had a lower total number of American College of Rheumatology (ACR) criteria, with less renal and neurologic manifestations. Mean SLE Disease Activity Index 2000 (SLEDAI-2K) scores were lower in late-onset SLE, especially renal features and anti-dsDNA positivity. Over 5 years, mean SLEDAI-2K scores decreased in both groups, while mean Systemic Lupus International Collaborating Clinics/ACR Damage Index (SDI) scores increased more significantly in the late-onset group; they developed more cardiovascular, renal, and ocular damage, and had higher prevalence of cardiovascular risk factors. Conclusion Although the late-onset SLE group had a milder presentation and less active disease, with the evolution of disease, they developed more organ damage likely as a consequence of cardiovascular risk factors and aging.

Adaptability and evolution.

PubMed

Bateson, Patrick

2017-10-06

The capacity of organisms to respond in their own lifetimes to new challenges in their environments probably appeared early in biological evolution. At present few studies have shown how such adaptability could influence the inherited characteristics of an organism's descendants. In part, this has been because organisms have been treated as passive in evolution. Nevertheless, their effects on biological evolution are likely to have been important and, when they occurred, accelerated the pace of evolution. Ways in which this might have happened have been suggested many times since the 1870s. I review these proposals and discuss their relevance to modern thought.

Post-early cretaceous landform evolution along the western margin of the banca~nnia trough, western nsw

USGS Publications Warehouse

Gibson, D.L.

2000-01-01

Previously undated post-Devonian sediments outcropping north of Fowlers Gap station near the western margin of the Bancannia Trough are shown by plant macro- and microfossil determinations to be of Early Cretaceous (most likely Neocomian and/or Aptian) age, and thus part of the Eromanga Basin. They are assigned to the previously defined Telephone Creek Formation. Study of the structural configuration of this unit and the unconformably underlying Devonian rocks suggests that the gross landscape architecture of the area results from post-Early Cretaceous monoclinal folding along blind faults at the western margin of the trough, combined with the effects of differential erosion. This study shows that, while landscape evolution in the area has been dynamic, the major changes that have occurred are on a geological rather than human timescale.

New Probe of Early Phases of Jet Formation and Evolution using Stellar Tidal Disruption Flares

NASA Astrophysics Data System (ADS)

Ranga Reddy Pasham, Dheeraj; van Velzen, Sjoert

2018-01-01

The tidal disruption of a star by a supermassive black hole can result in transient radio emission. The electrons producing these synchrotron radio flares could either be accelerated inside a relativistic jet or externally by shocks resulting from an outflow interacting with the circumnuclear medium. Until now, evidence for the internal emission mechanism has been lacking; nearly all tidal disruption flare studies have adopted the external shock model to explain the observed properties of radio flares. I will talk about a result that presents a challenge to external emission models: we discovered a cross-correlation between the soft X-ray (0.3-1 keV) and 16 GHz radio flux of Rosetta Stone tidal disruption flare ASASSN-14li. Variability features in the X-ray light curve appear again in the radio light curve, but after a time lag of about 13 days. This demonstrates that soft X-ray emitting accretion disk regulates the radio emission. This coupling appears to be inconsistent with all previous external emission models for this source but is naturally explained if the radio emission originates from a freely expanding jet. I will show that emission internal to an adiabatically expanding jet can also reproduce the observed evolution of the radio spectral energy distribution. Furthermore, both the correlation between X-ray and radio luminosity as well as our radio spectral modeling imply an approximately linear coupling between the accretion rate and jet power. I will also discuss how future tidal disruption events can help us understand how jets form and evolve in general.

Spectral measurements of cosmic gamma-ray bursts with the Konus-Wind and Konus-A instruments

DOE Office of Scientific and Technical Information (OSTI.GOV)

Golenetskii, S. V.; Aptekar, R. L.; Frederiks, D. D.

1998-05-16

The Konus gamma-ray burst instrumentation on board the US GGS-Wind spacecraft and the near-Earth Russian satellite Kosmos-2326 makes it possible to make spectral measurements and comparisons between 12 keV to 10 MeV. Since November 1994, over 370 bursts have been observed in the triggered mode, for which detailed spectral measurements are available. Incident photon spectra are derived from the count rate spectra of a number of bright bursts for which the celestial source position or the angle relative to the sensor axis is known. The spectral evolution of these bursts and the possible existence of spectral features in both themore » soft and hard energy bands are discussed.« less

Spectral analysis-based risk score enables early prediction of mortality and cerebral performance in patients undergoing therapeutic hypothermia for ventricular fibrillation and comatose status

PubMed Central

Filgueiras-Rama, David; Calvo, Conrado J.; Salvador-Montañés, Óscar; Cádenas, Rosalía; Ruiz-Cantador, Jose; Armada, Eduardo; Rey, Juan Ramón; Merino, J.L.; Peinado, Rafael; Pérez-Castellano, Nicasio; Pérez-Villacastín, Julián; Quintanilla, Jorge G.; Jiménez, Santiago; Castells, Francisco; Chorro, Francisco J.; López-Sendón, J.L.; Berenfeld, Omer; Jalife, José; López de Sá, Esteban; Millet, José

2017-01-01

Background Early prognosis in comatose survivors after cardiac arrest due to ventricular fibrillation (VF) is unreliable, especially in patients undergoing mild hypothermia. We aimed at developing a reliable risk-score to enable early prediction of cerebral performance and survival. Methods Sixty-one out of 239 consecutive patients undergoing mild hypothermia after cardiac arrest, with eventual return of spontaneous circulation (ROSC), and comatose status on admission fulfilled the inclusion criteria. Background clinical variables, VF time and frequency domain fundamental variables were considered. The primary and secondary outcomes were a favorable neurological performance (FNP) during hospitalization and survival to hospital discharge, respectively. The predictive model was developed in a retrospective cohort (n=32; September 2006–September 2011, 48.5 ± 10.5 months of follow-up) and further validated in a prospective cohort (n = 29; October 2011–July 2013, 5 ± 1.8 months of follow-up). Results FNP was present in 16 (50.0%) and 21 patients (72.4%) in the retrospective and prospective cohorts, respectively. Seventeen (53.1%) and 21 patients (72.4%), respectively, survived to hospital discharge. Both outcomes were significantly associated (p < 0.001). Retrospective multivariate analysis provided a prediction model (sensitivity= 0.94, specificity = 1) that included spectral dominant frequency, derived power density and peak ratios between high and low frequency bands, and the number of shocks delivered before ROSC. Validation on the prospective cohort showed sensitivity = 0.88 and specificity = 0.91. A model-derived risk-score properly predicted 93% of FNP. Testing the model on follow-up showed a c-statistic ≥ 0.89. Conclusions A spectral analysis-based model reliably correlates time-dependent VF spectral changes with acute cerebral injury in comatose survivors undergoing mild hypothermia after cardiac arrest. PMID:25828128

Virtual endocasts of Eocene Paramys (Paramyinae): oldest endocranial record for Rodentia and early brain evolution in Euarchontoglires.

PubMed

Bertrand, Ornella C; Amador-Mughal, Farrah; Silcox, Mary T

2016-01-27

Understanding the pattern of brain evolution in early rodents is central to reconstructing the ancestral condition for Glires, and for other members of Euarchontoglires including Primates. We describe the oldest virtual endocasts known for fossil rodents, which pertain to Paramys copei (Early Eocene) and Paramys delicatus (Middle Eocene). Both specimens of Paramys have larger olfactory bulbs and smaller paraflocculi relative to total endocranial volume than later occurring rodents, which may be primitive traits for Rodentia. The encephalization quotients (EQs) of Pa. copei and Pa. delicatus are higher than that of later occurring (Oligocene) Ischyromys typus, which contradicts the hypothesis that EQ increases through time in all mammalian orders. However, both species of Paramys have a lower relative neocortical surface area than later rodents, suggesting neocorticalization occurred through time in this Order, although to a lesser degree than in Primates. Paramys has a higher EQ but a lower neocortical ratio than any stem primate. This result contrasts with the idea that primates were always exceptional in their degree of overall encephalization and shows that relative brain size and neocortical surface area do not necessarily covary through time. As such, these data contradict assumptions made about the pattern of brain evolution in Euarchontoglires. © 2016 The Author(s).

Virtual endocasts of Eocene Paramys (Paramyinae): oldest endocranial record for Rodentia and early brain evolution in Euarchontoglires

PubMed Central

Amador-Mughal, Farrah

2016-01-01

Understanding the pattern of brain evolution in early rodents is central to reconstructing the ancestral condition for Glires, and for other members of Euarchontoglires including Primates. We describe the oldest virtual endocasts known for fossil rodents, which pertain to Paramys copei (Early Eocene) and Paramys delicatus (Middle Eocene). Both specimens of Paramys have larger olfactory bulbs and smaller paraflocculi relative to total endocranial volume than later occurring rodents, which may be primitive traits for Rodentia. The encephalization quotients (EQs) of Pa. copei and Pa. delicatus are higher than that of later occurring (Oligocene) Ischyromys typus, which contradicts the hypothesis that EQ increases through time in all mammalian orders. However, both species of Paramys have a lower relative neocortical surface area than later rodents, suggesting neocorticalization occurred through time in this Order, although to a lesser degree than in Primates. Paramys has a higher EQ but a lower neocortical ratio than any stem primate. This result contrasts with the idea that primates were always exceptional in their degree of overall encephalization and shows that relative brain size and neocortical surface area do not necessarily covary through time. As such, these data contradict assumptions made about the pattern of brain evolution in Euarchontoglires. PMID:26817776

RXTE Observations of A1744-361: Correlated Spectral and Timing Behavior

NASA Technical Reports Server (NTRS)

Bhattacharyya, Sudip; Strohmayer, Tod E.; Swank, Jean H.; Markwardt, Craig B.

2007-01-01

We analyze Rossi X-ray Timing Explorer (RXTE) Proportional Counter Array (PCA) data of the transient low mass X-ray binary (LMXB) system A1744-361. We explore the X-ray intensity and spectral evolution of the source, perform timing analysis, and find that A1744-361 is a weak LMXB, that shows atoll behavior at high intensity states. The color-color diagram indicates that this LMXB was observed in a low intensity spectrally hard (low-hard) state and in a high intensity banana state. The low-hard state shows a horizontal pattern in the color-color diagram, and the previously reported dipper QPO appears only during this state. We also perform energy spectral analyses, and report the first detection of broad iron emission line and iron absorption edge from A1744-361.

Organic chemical evolution

NASA Technical Reports Server (NTRS)

Chang, S.

1981-01-01

The course of organic chemical evolution preceding the emergence of life on earth is discussed based on evidence of processes occurring in interstellar space, the solar system and the primitive earth. Following a brief review of the equilibrium condensation model for the origin and evolution of the solar system, consideration is given to the nature and organic chemistry of interstellar clouds, comets, Jupiter, meteorites, Venus and Mars, and the prebiotic earth. Major issues to be resolved in the study of organic chemical evolution on earth are identified regarding condensation and accretion in the solar nebula, early geological evolution, the origin and evolution of the atmosphere, organic production rates, organic-inorganic interactions, environmental fluctuations, phase separation and molecular selectivity.

Two-point spectral model for variable density homogeneous turbulence

NASA Astrophysics Data System (ADS)

Pal, Nairita; Kurien, Susan; Clark, Timothy; Aslangil, Denis; Livescu, Daniel

2017-11-01

We present a comparison between a two-point spectral closure model for buoyancy-driven variable density homogeneous turbulence, with Direct Numerical Simulation (DNS) data of the same system. We wish to understand how well a suitable spectral model might capture variable density effects and the transition to turbulence from an initially quiescent state. Following the BHRZ model developed by Besnard et al. (1990), the spectral model calculation computes the time evolution of two-point correlations of the density fluctuations with the momentum and the specific-volume. These spatial correlations are expressed as function of wavenumber k and denoted by a (k) and b (k) , quantifying mass flux and turbulent mixing respectively. We assess the accuracy of the model, relative to a full DNS of the complete hydrodynamical equations, using a and b as metrics. Work at LANL was performed under the auspices of the U.S. DOE Contract No. DE-AC52-06NA25396.

Potomacapnos apeleutheron gen. et sp. nov., a new Early Cretaceous angiosperm from the Potomac Group and its implications for the evolution of eudicot leaf architecture.

PubMed

Jud, Nathan A; Hickey, Leo J

2013-12-01

Eudicots diverged early in the evolution of flowering plants and now comprise more than 70% of angiosperm species. In spite of the importance of eudicots, our understanding of the early evolution of this clade is limited by a poor fossil record and uncertainty about the order of early phylogenetic branching. The study of Lower Cretaceous fossils can reveal much about the evolution, morphology, and ecology of the eudicots. Fossils described here were collected from Aptian sediments of the Potomac Group exposed at the Dutch Gap locality in Virginia, USA. Specimens were prepared by degaging, then described and compared with leaves of relevant extant and fossil plants. We conducted a phylogenetic analysis of morphological characters using parsimony while constraining the tree search with the topology found through molecular phylogenetic analyses. The new species is closely related to ranunculalean eudicots and has leaf architecture remarkably similar to some living Fumarioideae (Papaveraceae). These are the oldest eudicot megafossils from North America, and they show complex leaf architecture reflecting developmental pathways unique to extant eudicots. The morphology and small size of the fossils suggest that they were herbaceous plants, as is seen in other putative early eudicots. The absence of co-occurring tricolpate pollen at Dutch Gap either (1) reflects low preservation probability for pollen of entomophilous herbs or (2) indicates that some leaf features of extant eudicots appeared before the origin of tricolpate pollen.

Precision Spectral Variability of L Dwarfs from the Ground

NASA Astrophysics Data System (ADS)

Burgasser, Adam J.; Schlawin, Everett; Teske, Johanna K.; Karalidi, Theodora; Gizis, John

2017-01-01

L dwarf photospheres (1500 K < T < 2500 K) contain mineral and metal condensates, which appear to organize into cloud structures as inferred from observed periodic photometric variations with amplitudes of <1%-30%. Studying the vertical structure, composition, and long-term evolution of these clouds necessitates precision spectroscopic monitoring, until recently limited to space-based facilities. Building on techniques developed for ground-based exoplanet transit spectroscopy, we present a method for precision spectral monitoring of L dwarfs with nearby visual companions. Using IRTF/SpeX, we demonstrate <0.5% spectral variability precision across the 0.9-2.4 micron band, and present results for two known L5 dwarf variables, J0835-0819 and J1821+1414, both of which show evidence of 3D cloud structure similar to that seen in space-based observations. We describe a survey of 30 systems which would sample the full L dwarf sequence and allow characterization of temperature, surface gravity, metallicity, rotation period and orientation effects on cloud structure, composition and evolution.This research is supported by funding from the National Science Foundation under award No. AST-1517177, and the National Aeronautics and Space Administration under Grant No. NNX15AI75G.

DIFFERENT ORIGINS OR DIFFERENT EVOLUTIONS? DECODING THE SPECTRAL DIVERSITY AMONG C-TYPE ASTEROIDS

DOE Office of Scientific and Technical Information (OSTI.GOV)

Vernazza, P.; Marsset, M.; Groussin, O.

Anhydrous pyroxene-rich interplanetary dust particles (IDPs) have been proposed as surface analogs for about two-thirds of all C-complex asteroids. However, this suggestion appears to be inconsistent with the presence of hydrated silicates on the surfaces of some of these asteroids, including Ceres. Here, we report the presence of enstatite (pyroxene) on the surface of two C-type asteroids (Ceres and Eugenia) based on their spectral properties in the mid-infrared range. The presence of this component is particularly unexpected in the case of Ceres, because most thermal evolution models predict a surface consisting of hydrated compounds only. The most plausible scenario is that Ceres’more » surface has been partially contaminated by exogenous enstatite-rich material, possibly coming from the Beagle asteroid family. This scenario questions a similar origin for Ceres and the remaining C-types, and it possibly supports recent results obtained by the Dawn mission (NASA) that Ceres may have formed in the very outer solar system. Concerning the smaller D  ∼ 200 km C-types such as Eugenia, both their derived surface composition (enstatite and amorphous silicates) and low density (<1.5 g cm{sup −3}) suggest that these bodies accreted from the same building blocks, namely chondritic porous, pyroxene-rich IDPs and volatiles (mostly water ice), and that a significant volume fraction of these bodies has remained unaffected by hydrothermal activity likely implying a late accretion. In addition, their current heliocentric distance may best explain the presence or absence of water ice at their surfaces. Finally, we raise the possibility that CI chondrites, Tagish-Lake-like material, or hydrated IDPs may be representative samples of the cores of these bodies.« less

On- and off-axis spectral emission features from laser-produced gas breakdown plasmas

NASA Astrophysics Data System (ADS)

Harilal, S. S.; Skrodzki, P. J.; Miloshevsky, A.; Brumfield, B. E.; Phillips, M. C.; Miloshevsky, G.

2017-06-01

Laser-heated gas breakdown plasmas or sparks emit profoundly in the ultraviolet and visible region of the electromagnetic spectrum with contributions from ionic, atomic, and molecular species. Laser created kernels expand into a cold ambient with high velocities during their early lifetime followed by confinement of the plasma kernel and eventually collapse. However, the plasma kernels produced during laser breakdown of gases are also capable of exciting and ionizing the surrounding ambient medium. Two mechanisms can be responsible for excitation and ionization of the surrounding ambient: photoexcitation and ionization by intense ultraviolet emission from the sparks produced during the early times of their creation and/or heating by strong shocks generated by the kernel during its expansion into the ambient. In this study, an investigation is made on the spectral features of on- and off-axis emission of laser-induced plasma breakdown kernels generated in atmospheric pressure conditions with an aim to elucidate the mechanisms leading to ambient excitation and emission. Pulses from an Nd:YAG laser emitting at 1064 nm with a pulse duration of 6 ns are used to generate plasma kernels. Laser sparks were generated in air, argon, and helium gases to provide different physical properties of expansion dynamics and plasma chemistry considering the differences in laser absorption properties, mass density, and speciation. Point shadowgraphy and time-resolved imaging were used to evaluate the shock wave and spark self-emission morphology at early and late times, while space and time resolved spectroscopy is used for evaluating the emission features and for inferring plasma physical conditions at on- and off-axis positions. The structure and dynamics of the plasma kernel obtained using imaging techniques are also compared to numerical simulations using the computational fluid dynamics code. The emission from the kernel showed that spectral features from ions, atoms, and

On- and off-axis spectral emission features from laser-produced gas breakdown plasmas

DOE Office of Scientific and Technical Information (OSTI.GOV)

Harilal, S. S.; Skrodzki, P. J.; Miloshevsky, A.

Laser-heated gas breakdown plasmas or sparks emit profoundly in the ultraviolet and visible region of the electromagnetic spectrum with contributions from ionic, atomic, and molecular species. Laser created kernels expand into a cold ambient with high velocities during its early lifetime followed by confinement of the plasma kernel and eventually collapse. However, the plasma kernels produced during laser breakdown of gases are also capable of exciting and ionizing the surrounding ambient medium. Two mechanisms can be responsible for excitation and ionization of surrounding ambient: viz. photoexcitation and ionization by intense ultraviolet emission from the sparks produced during the early timesmore » of its creation and/or heating by strong shocks generated by the kernel during its expansion into the ambient. In this study, an investigation is made on the spectral features of on- and off-axis emission features of laser-induced plasma breakdown kernels generated in atmospheric pressure conditions with an aim to elucidate the mechanisms leading to ambient excitation and emission. Pulses from an Nd:YAG laser emitting at 1064 nm with 6 ns pulse duration are used to generate plasma kernels. Laser sparks were generated in air, argon, and helium gases to provide different physical properties of expansion dynamics and plasma chemistry considering the differences in laser absorption properties, mass density and speciation. Point shadowgraphy and time-resolved imaging were used to evaluate the shock wave and spark self-emission morphology at early and late times while space and time resolved spectroscopy is used for evaluating the emission features as well as for inferring plasma fundaments at on- and off-axis. Structure and dynamics of the plasma kernel obtained using imaging techniques are also compared to numerical simulations using computational fluid dynamics code. The emission from the kernel showed that spectral features from ions, atoms and molecules are

On- and off-axis spectral emission features from laser-produced gas breakdown plasmas

DOE PAGES

Harilal, S. S.; Skrodzki, P. J.; Miloshevsky, A.; ...

2017-06-01

Laser-heated gas breakdown plasmas or sparks emit profoundly in the ultraviolet and visible region of the electromagnetic spectrum with contributions from ionic, atomic, and molecular species. Laser created kernels expand into a cold ambient with high velocities during its early lifetime followed by confinement of the plasma kernel and eventually collapse. However, the plasma kernels produced during laser breakdown of gases are also capable of exciting and ionizing the surrounding ambient medium. Two mechanisms can be responsible for excitation and ionization of surrounding ambient: viz. photoexcitation and ionization by intense ultraviolet emission from the sparks produced during the early timesmore » of its creation and/or heating by strong shocks generated by the kernel during its expansion into the ambient. In this study, an investigation is made on the spectral features of on- and off-axis emission features of laser-induced plasma breakdown kernels generated in atmospheric pressure conditions with an aim to elucidate the mechanisms leading to ambient excitation and emission. Pulses from an Nd:YAG laser emitting at 1064 nm with 6 ns pulse duration are used to generate plasma kernels. Laser sparks were generated in air, argon, and helium gases to provide different physical properties of expansion dynamics and plasma chemistry considering the differences in laser absorption properties, mass density and speciation. Point shadowgraphy and time-resolved imaging were used to evaluate the shock wave and spark self-emission morphology at early and late times while space and time resolved spectroscopy is used for evaluating the emission features as well as for inferring plasma fundaments at on- and off-axis. Structure and dynamics of the plasma kernel obtained using imaging techniques are also compared to numerical simulations using computational fluid dynamics code. The emission from the kernel showed that spectral features from ions, atoms and molecules are

Spectral reconstruction analysis for enhancing signal-to-noise in time-resolved spectroscopies

NASA Astrophysics Data System (ADS)

Wilhelm, Michael J.; Smith, Jonathan M.; Dai, Hai-Lung

2015-09-01

We demonstrate a new spectral analysis for the enhancement of the signal-to-noise ratio (SNR) in time-resolved spectroscopies. Unlike the simple linear average which produces a single representative spectrum with enhanced SNR, this Spectral Reconstruction analysis (SRa) improves the SNR (by a factor of ca. 0 . 6 √{ n } ) for all n experimentally recorded time-resolved spectra. SRa operates by eliminating noise in the temporal domain, thereby attenuating noise in the spectral domain, as follows: Temporal profiles at each measured frequency are fit to a generic mathematical function that best represents the temporal evolution; spectra at each time are then reconstructed with data points from the fitted profiles. The SRa method is validated with simulated control spectral data sets. Finally, we apply SRa to two distinct experimentally measured sets of time-resolved IR emission spectra: (1) UV photolysis of carbonyl cyanide and (2) UV photolysis of vinyl cyanide.

Investigation of Spectral Lag and Epeak as Joint Luminosity Indicators in GRBs

NASA Technical Reports Server (NTRS)

White, Nicholas E. (Technical Monitor); Norris, Jay P.

2003-01-01

Models for gamma-ray bursts which invoke jetted, colliding shells would appear to have at least two determinants for luminosity, e.g., observer viewing angle and Lorentz factor, or possibly shell mass. The latter two internal physical parameters may vary from pulse to pulse within a burst, and such variation might be reflected in evolution of observables such as spectral lag and peak in the spectral energy distribution. We analyze bright BATSE bursts using the 16-channel medium energy resolution (MER) data, with time resolutions of 16 and 64 ms, measuring spectral lags and peak energies for significant pulse structures within a burst, identified using a Bayesian block algorithm. We then explore correlations between the measured parameters and total flux for the individual pulse structures.

Evolution of allosteric regulation in chorismate mutases from early plants

DOE Office of Scientific and Technical Information (OSTI.GOV)

Kroll, Kourtney; Holland, Cynthia K.; Starks, Courtney M.

Plants, fungi, and bacteria synthesize the aromatic amino acids: l-phenylalanine, l-tyrosine, and l-tryptophan. Chorismate mutase catalyzes the branch point reaction of phenylalanine and tyrosine biosynthesis to generate prephenate. In Arabidopsis thaliana, there are two plastid-localized chorismate mutases that are allosterically regulated (AtCM1 and AtCM3) and one cytosolic isoform (AtCM2) that is unregulated. Previous analysis of plant chorismate mutases suggested that the enzymes from early plants (i.e. bryophytes/moss, lycophytes, and basal angiosperms) formed a clade distinct from the isoforms found in flowering plants; however, no biochemical information on these enzymes is available. To understand the evolution of allosteric regulation in plantmore » chorismate mutases, we analyzed a basal lineage of plant enzymes homologous to AtCM1 based on sequence similarity. The chorismate mutases from the moss/bryophyte Physcomitrella patens (PpCM1 and PpCM2), the lycophyte Selaginella moellendorffii (SmCM), and the basal angiosperm Amborella trichopoda (AmtCM1 and AmtCM2) were characterized biochemically. Tryptophan was a positive effector for each of the five enzymes examined. Histidine was a weak positive effector for PpCM1 and AmtCM1. Neither tyrosine nor phenylalanine altered the activity of SmCM; however, tyrosine was a negative regulator of the other four enzymes. Phenylalanine down-regulates both moss enzymes and AmtCM2. The 2.0 Å X-ray crystal structure of PpCM1 in complex with the tryptophan identified the allosteric effector site and reveals structural differences between the R- (more active) and T-state (less active) forms of plant chorismate mutases. Molecular insight into the basal plant chorismate mutases guides our understanding of the evolution of allosteric regulation in these enzymes.« less

The Spectral Shift Function and Spectral Flow

NASA Astrophysics Data System (ADS)

Azamov, N. A.; Carey, A. L.; Sukochev, F. A.

2007-11-01

At the 1974 International Congress, I. M. Singer proposed that eta invariants and hence spectral flow should be thought of as the integral of a one form. In the intervening years this idea has lead to many interesting developments in the study of both eta invariants and spectral flow. Using ideas of [24] Singer’s proposal was brought to an advanced level in [16] where a very general formula for spectral flow as the integral of a one form was produced in the framework of noncommutative geometry. This formula can be used for computing spectral flow in a general semifinite von Neumann algebra as described and reviewed in [5]. In the present paper we take the analytic approach to spectral flow much further by giving a large family of formulae for spectral flow between a pair of unbounded self-adjoint operators D and D + V with D having compact resolvent belonging to a general semifinite von Neumann algebra {mathcal{N}} and the perturbation V in {mathcal{N}} . In noncommutative geometry terms we remove summability hypotheses. This level of generality is made possible by introducing a new idea from [3]. There it was observed that M. G. Krein’s spectral shift function (in certain restricted cases with V trace class) computes spectral flow. The present paper extends Krein’s theory to the setting of semifinite spectral triples where D has compact resolvent belonging to {mathcal{N}} and V is any bounded self-adjoint operator in {mathcal{N}} . We give a definition of the spectral shift function under these hypotheses and show that it computes spectral flow. This is made possible by the understanding discovered in the present paper of the interplay between spectral shift function theory and the analytic theory of spectral flow. It is this interplay that enables us to take Singer’s idea much further to create a large class of one forms whose integrals calculate spectral flow. These advances depend critically on a new approach to the calculus of functions of non

[The radial velocity measurement accuracy of different spectral type low resolution stellar spectra at different signal-to-noise ratio].

PubMed

Wang, Feng-Fei; Luo, A-Li; Zhao, Yong-Heng

2014-02-01

The radial velocity of the star is very important for the study of the dynamics structure and chemistry evolution of the Milky Way, is also an useful tool for looking for variable or special objects. In the present work, we focus on calculating the radial velocity of different spectral types of low-resolution stellar spectra by adopting a template matching method, so as to provide effective and reliable reference to the different aspects of scientific research We choose high signal-to-noise ratio (SNR) spectra of different spectral type stellar from the Sloan Digital Sky Survey (SDSS), and add different noise to simulate the stellar spectra with different SNR. Then we obtain theradial velocity measurement accuracy of different spectral type stellar spectra at different SNR by employing a template matching method. Meanwhile, the radial velocity measurement accuracy of white dwarf stars is analyzed as well. We concluded that the accuracy of radial velocity measurements of early-type stars is much higher than late-type ones. For example, the 1-sigma standard error of radial velocity measurements of A-type stars is 5-8 times as large as K-type and M-type stars. We discuss the reason and suggest that the very narrow lines of late-type stars ensure the accuracy of measurement of radial velocities, while the early-type stars with very wide Balmer lines, such as A-type stars, become sensitive to noise and obtain low accuracy of radial velocities. For the spectra of white dwarfs stars, the standard error of radial velocity measurement could be over 50 km x s(-1) because of their extremely wide Balmer lines. The above conclusion will provide a good reference for stellar scientific study.

Development of Translational Methods in Spectral Analysis of Human Infant Crying and Rat Pup Ultrasonic Vocalizations for Early Neurobehavioral Assessment

PubMed Central

Zeskind, Philip Sanford; McMurray, Matthew S.; Garber, Kristin A.; Neuspiel, Juliana M.; Cox, Elizabeth T.; Grewen, Karen M.; Mayes, Linda C.; Johns, Josephine M.

2011-01-01

The purpose of this article is to describe the development of translational methods by which spectrum analysis of human infant crying and rat pup ultrasonic vocalizations (USVs) can be used to assess potentially adverse effects of various prenatal conditions on early neurobehavioral development. The study of human infant crying has resulted in a rich set of measures that has long been used to assess early neurobehavioral insult due to non-optimal prenatal environments, even among seemingly healthy newborn and young infants. In another domain of study, the analysis of rat put USVs has been conducted via paradigms that allow for better experimental control over correlated prenatal conditions that may confound findings and conclusions regarding the effects of specific prenatal experiences. The development of translational methods by which cry vocalizations of both species can be analyzed may provide the opportunity for findings from the two approaches of inquiry to inform one another through their respective strengths. To this end, we present an enhanced taxonomy of a novel set of common measures of cry vocalizations of both human infants and rat pups based on a conceptual framework that emphasizes infant crying as a graded and dynamic acoustic signal. This set includes latency to vocalization onset, duration and repetition rate of expiratory components, duration of inter-vocalization-intervals and spectral features of the sound, including the frequency and amplitude of the fundamental and dominant frequencies. We also present a new set of classifications of rat pup USV waveforms that include qualitative shifts in fundamental frequency, similar to the presence of qualitative shifts in fundamental frequency that have previously been related to insults to neurobehavioral integrity in human infants. Challenges to the development of translational analyses, including the use of different terminologies, methods of recording, and spectral analyses are discussed, as well as

Galaxy Evolution Insights from Spectral Modeling of Large Data Sets from the Sloan Digital Sky Survey

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hoversten, Erik A.

This thesis centers on the use of spectral modeling techniques on data from the Sloan Digital Sky Survey (SDSS) to gain new insights into current questions in galaxy evolution. The SDSS provides a large, uniform, high quality data set which can be exploited in a number of ways. One avenue pursued here is to use the large sample size to measure precisely the mean properties of galaxies of increasingly narrow parameter ranges. The other route taken is to look for rare objects which open up for exploration new areas in galaxy parameter space. The crux of this thesis is revisitingmore » the classical Kennicutt method for inferring the stellar initial mass function (IMF) from the integrated light properties of galaxies. A large data set (~ 10 5 galaxies) from the SDSS DR4 is combined with more in-depth modeling and quantitative statistical analysis to search for systematic IMF variations as a function of galaxy luminosity. Galaxy Hα equivalent widths are compared to a broadband color index to constrain the IMF. It is found that for the sample as a whole the best fitting IMF power law slope above 0.5 M ⊙ is Γ = 1.5 ± 0.1 with the error dominated by systematics. Galaxies brighter than around M r,0.1 = -20 (including galaxies like the Milky Way which has M r,0.1 ~ -21) are well fit by a universal Γ ~ 1.4 IMF, similar to the classical Salpeter slope, and smooth, exponential star formation histories (SFH). Fainter galaxies prefer steeper IMFs and the quality of the fits reveal that for these galaxies a universal IMF with smooth SFHs is actually a poor assumption. Related projects are also pursued. A targeted photometric search is conducted for strongly lensed Lyman break galaxies (LBG) similar to MS1512-cB58. The evolution of the photometric selection technique is described as are the results of spectroscopic follow-up of the best targets. The serendipitous discovery of two interesting blue compact dwarf galaxies is reported. These galaxies were identified by their

Milgram's Obedience to Authority experiments: origins and early evolution.

PubMed

Russell, Nestar John Charles

2011-03-01

Stanley Milgram's Obedience to Authority experiments remain one of the most inspired contributions in the field of social psychology. Although Milgram undertook more than 20 experimental variations, his most (in)famous result was the first official trial run - the remote condition and its 65% completion rate. Drawing on many unpublished documents from Milgram's personal archive at Yale University, this article traces the historical origins and early evolution of the obedience experiments. Part 1 presents the previous experiences that led to Milgram's conception of his rudimentary research idea and then details the role of his intuition in its refinement. Part 2 traces the conversion of Milgram's evolving idea into a reality, paying particular attention to his application of the exploratory method of discovery during several pilot studies. Both parts illuminate Milgram's ad hoc introduction of various manipulative techniques and subtle tension-resolving refinements. The procedural adjustments continued until Milgram was confident that the first official experiment would produce a high completion rate, a result contrary to expectations of people's behaviour. Showing how Milgram conceived of, then arrived at, this first official result is important because the insights gained may help others to determine theoretically why so many participants completed this experiment. ©2010 The British Psychological Society.

Early Evolution of Vertebrate Mybs: An Integrative Perspective Combining Synteny, Phylogenetic, and Gene Expression Analyses

PubMed Central

Campanini, Emeline B.; Vandewege, Michael W.; Pillai, Nisha E.; Tay, Boon-Hui; Jones, Justin L.; Venkatesh, Byrappa; Hoffmann, Federico G.

2015-01-01

Abstract The genes in the Myb superfamily encode for three related transcription factors in most vertebrates, A-, B-, and c-Myb, with functionally distinct roles, whereas most invertebrates have a single Myb. B-Myb plays an essential role in cell division and cell cycle progression, c-Myb is involved in hematopoiesis, and A-Myb is involved in spermatogenesis and regulating expression of pachytene PIWI interacting RNAs, a class of small RNAs involved in posttranscriptional gene regulation and the maintenance of reproductive tissues. Comparisons between teleost fish and tetrapods suggest that the emergence and functional divergence of the Myb genes were linked to the two rounds of whole-genome duplication early in vertebrate evolution. We combined phylogenetic, synteny, structural, and gene expression analyses of the Myb paralogs from elephant shark and lampreys with data from 12 bony vertebrates to reconstruct the early evolution of vertebrate Mybs. Phylogenetic and synteny analyses suggest that the elephant shark and Japanese lamprey have copies of the A-, B-, and c-Myb genes, implying their origin could be traced back to the common ancestor of lampreys and gnathostomes. However, structural and gene expression analyses suggest that their functional roles diverged between gnathostomes and cyclostomes. In particular, we did not detect A-Myb expression in testis suggesting that the involvement of A-Myb in the pachytene PIWI interacting RNA pathway is probably a gnathostome-specific innovation. We speculate that the secondary loss of a central domain in lamprey A-Myb underlies the functional differences between the cyclostome and gnathostome A-Myb proteins. PMID:26475318

Importance of Resolving the Spectral Support of Beam-plasma Instabilities in Simulations

DOE Office of Scientific and Technical Information (OSTI.GOV)

Shalaby, Mohamad; Broderick, Avery E.; Chang, Philip

2017-10-20

Many astrophysical plasmas are prone to beam-plasma instabilities. For relativistic and dilute beams, the spectral support of the beam-plasma instabilities is narrow, i.e., the linearly unstable modes that grow with rates comparable to the maximum growth rate occupy a narrow range of wavenumbers. This places stringent requirements on the box-sizes when simulating the evolution of the instabilities. We identify the implied lower limits on the box size imposed by the longitudinal beam plasma instability, i.e., typically the most stringent condition required to correctly capture the linear evolution of the instabilities in multidimensional simulations. We find that sizes many orders ofmore » magnitude larger than the resonant wavelength are typically required. Using one-dimensional particle-in-cell simulations, we show that the failure to sufficiently resolve the spectral support of the longitudinal instability yields slower growth and lower levels of saturation, potentially leading to erroneous physical conclusion.« less

a Comparative Study of the Timing and the Spectral Properties during Two Recent Outbursts (2010 and 2011) of H 1743-322

NASA Astrophysics Data System (ADS)

Debnath, Dipak; Chakrabarti, Sandip. K.; Nandi, Anuj

2015-01-01

The Galactic black hole candidate (BHC) H 1743-322 recently exhibited two outbursts in X-rays in August 2010 & April 2011. The nature (outburst profile, evolution of quasi-periodic oscillation (QPO) frequency and spectral states, etc.) of these two successive outbursts, which continued for around two months each, are very similar. We present the results obtained from a comparative study on the temporal and the spectral properties of the source during these two outbursts. The evolutions of QPOs observed in both the outbursts were well fitted with propagating oscillatory shock (POS) model. During both the outbursts, the observed spectral states (i.e, hard, hard-intermediate, soft-intermediate and soft) follow the `standard' type of hysteresis-loop, which could be explained with two component advective flow (TCAF) model.

Ultrafast spectral dynamics of dual-color-soliton intracavity collision in a mode-locked fiber laser

NASA Astrophysics Data System (ADS)

Wei, Yuan; Li, Bowen; Wei, Xiaoming; Yu, Ying; Wong, Kenneth K. Y.

2018-02-01

The single-shot spectral dynamics of dual-color-soliton collisions inside a mode-locked laser is experimentally and numerically investigated. By using the all-optically dispersive Fourier transform, we spectrally unveil the collision-induced soliton self-reshaping process, which features dynamic spectral fringes over the soliton main lobe, and the rebuilding of Kelly sidebands with wavelength drifting. Meanwhile, the numerical simulations validate the experimental observation and provide additional insights into the physical mechanism of the collision-induced spectral dynamics from the temporal domain perspective. It is verified that the dynamic interference between the soliton and the dispersive waves is responsible for the observed collision-induced spectral evolution. These dynamic phenomena not only demonstrate the role of dispersive waves in the sophisticated soliton interaction inside the laser cavity, but also facilitate a deeper understanding of the soliton's inherent stability.

Evolution of herbivore-induced early defense signaling was shaped by genome-wide duplications in Nicotiana

PubMed Central

Zhou, Wenwu; Brockmöller, Thomas; Ling, Zhihao; Omdahl, Ashton; Baldwin, Ian T; Xu, Shuqing

2016-01-01

Herbivore-induced defenses are widespread, rapidly evolving and relevant for plant fitness. Such induced defenses are often mediated by early defense signaling (EDS) rapidly activated by the perception of herbivore associated elicitors (HAE) that includes transient accumulations of jasmonic acid (JA). Analyzing 60 HAE-induced leaf transcriptomes from closely-related Nicotiana species revealed a key gene co-expression network (M4 module) which is co-activated with the HAE-induced JA accumulations but is elicited independently of JA, as revealed in plants silenced in JA signaling. Functional annotations of the M4 module were consistent with roles in EDS and a newly identified hub gene of the M4 module (NaLRRK1) mediates a negative feedback loop with JA signaling. Phylogenomic analysis revealed preferential gene retention after genome-wide duplications shaped the evolution of HAE-induced EDS in Nicotiana. These results highlight the importance of genome-wide duplications in the evolution of adaptive traits in plants. DOI: http://dx.doi.org/10.7554/eLife.19531.001 PMID:27813478

Early Stages of Microstructure and Texture Evolution during Beta Annealing of Ti-6Al-4V

NASA Astrophysics Data System (ADS)

Pilchak, A. L.; Sargent, G. A.; Semiatin, S. L.

2018-03-01

The early stages of microstructure evolution during annealing of Ti-6Al-4V in the beta phase field were established. For this purpose, a series of short-time heat treatments was performed using sheet samples that had a noticeable degree of alpha-phase microtexture in the as-received condition. Reconstruction of the beta-grain structure from electron-backscatter-diffraction measurements of the room-temperature alpha-phase texture revealed that microstructure evolution at short times was controlled not by general grain growth, but rather by nucleation-and-growth events analogous to discontinuous recrystallization. The nuclei comprised a small subset of beta grains that were highly misoriented relative to those comprising the principal texture component of the beta matrix. From a quantitative standpoint, the transformation kinetics were characterized by an Avrami exponent of approximately unity, thus suggestive of metadynamic recrystallization. The recrystallization process led to the weakening and eventual elimination of the initial beta texture through the growth of a population of highly misoriented grains.

Polarized Redundant-Baseline Calibration for 21 cm Cosmology Without Adding Spectral Structure

NASA Astrophysics Data System (ADS)

Dillon, Joshua S.; Kohn, Saul A.; Parsons, Aaron R.; Aguirre, James E.; Ali, Zaki S.; Bernardi, Gianni; Kern, Nicholas S.; Li, Wenyang; Liu, Adrian; Nunhokee, Chuneeta D.; Pober, Jonathan C.

2018-04-01

21 cm cosmology is a promising new probe of the evolution of visible matter in our universe, especially during the poorly-constrained Cosmic Dawn and Epoch of Reionization. However, in order to separate the 21 cm signal from bright astrophysical foregrounds, we need an exquisite understanding of our telescopes so as to avoid adding spectral structure to spectrally-smooth foregrounds. One powerful calibration method relies on repeated simultaneous measurements of the same interferometric baseline to solve for the sky signal and for instrumental parameters simultaneously. However, certain degrees of freedom are not constrained by asserting internal consistency between redundant measurements. In this paper, we review the origin of these degeneracies of redundant-baseline calibration and demonstrate how they can source unwanted spectral structure in our measurement and show how to eliminate that additional, artificial structure. We also generalize redundant calibration to dual-polarization instruments, derive the degeneracy structure, and explore the unique challenges to calibration and preserving spectral smoothness presented by a polarized measurement.

Polarized redundant-baseline calibration for 21 cm cosmology without adding spectral structure

NASA Astrophysics Data System (ADS)

Dillon, Joshua S.; Kohn, Saul A.; Parsons, Aaron R.; Aguirre, James E.; Ali, Zaki S.; Bernardi, Gianni; Kern, Nicholas S.; Li, Wenyang; Liu, Adrian; Nunhokee, Chuneeta D.; Pober, Jonathan C.

2018-07-01

21 cm cosmology is a promising new probe of the evolution of visible matter in our universe, especially during the poorly constrained Cosmic Dawn and Epoch of Reionization. However, in order to separate the 21 cm signal from bright astrophysical foregrounds, we need an exquisite understanding of our telescopes so as to avoid adding spectral structure to spectrally smooth foregrounds. One powerful calibration method relies on repeated simultaneous measurements of the same interferometric baseline to solve for the sky signal and for instrumental parameters simultaneously. However, certain degrees of freedom are not constrained by asserting internal consistency between redundant measurements. In this paper, we review the origin of these degeneracies of redundant-baseline calibration and demonstrate how they can source unwanted spectral structure in our measurement and show how to eliminate that additional, artificial structure. We also generalize redundant calibration to dual-polarization instruments, derive the degeneracy structure, and explore the unique challenges to calibration and preserving spectral smoothness presented by a polarized measurement.

Early and late components of EEG delay activity correlate differently with scene working memory performance

PubMed Central

Ng, Kenneth; Reichert, Chelsea P.

2017-01-01

Sustained and elevated activity during the working memory delay period has long been considered the primary neural correlate for maintaining information over short time intervals. This idea has recently been reinterpreted in light of findings generated from multiple neural recording modalities and levels of analysis. To further investigate the sustained or transient nature of activity, the temporal-spectral evolution (TSE) of delay period activity was examined in humans with high density EEG during performance of a Sternberg working memory paradigm with a relatively long six second delay and with novel scenes as stimuli. Multiple analyses were conducted using different trial window durations and different baseline periods for TSE computation. Sensor level analyses revealed transient rather than sustained activity during delay periods. Specifically, the consistent finding among the analyses was that high amplitude activity encompassing the theta range was found early in the first three seconds of the delay period. These increases in activity early in the delay period correlated positively with subsequent ability to distinguish new from old probe scenes. Source level signal estimation implicated a right parietal region of transient early delay activity that correlated positively with working memory ability. This pattern of results adds to recent evidence that transient rather than sustained delay period activity supports visual working memory performance. The findings are discussed in relation to synchronous and desynchronous intra- and inter-regional neural transmission, and choosing an optimal baseline for expressing temporal-spectral delay activity change. PMID:29016657

Early evolution and dynamics of Earth from a molten initial stage

NASA Astrophysics Data System (ADS)

Louro Lourenço, Diogo; Tackley, Paul J.

2016-04-01

It is now well established that most of the terrestrial planets underwent a magma ocean stage during their accretion. On Earth, it is probable that at the end of accretion, giant impacts like the hypothesised Moon-forming impact, together with other sources of heat, melted a substantial part of the mantle. The thermal and chemical evolution of the resulting magma ocean most certainly had dramatic consequences on the history of the planet. Considerable research has been done on magma oceans using simple 1-D models (e.g.: Abe, PEPI 1997; Solomatov, Treat. Geophys. 2007; Elkins-Tanton EPSL 2008). However, some aspects of the dynamics may not be adequately addressed in 1-D and require the use of 2-D or 3-D models. Moreover, new developments in mineral physics that indicate that melt can be denser than solid at high pressures (e.g.: de Koker et al., EPSL 2013) can have very important impacts on the classical views of the solidification of magma oceans (Labrosse et al., Nature 2007). The goal of our study is to understand and characterize the influence of melting on the long-term thermo-chemical evolution of rocky planet interiors, starting from an initial molten state (magma ocean). Our approach is to model viscous creep of the solid mantle, while parameterizing processes that involve melt as previously done in 1-D models, including melt-solid separation at all melt fractions, the use of an effective diffusivity to parameterize turbulent mixing, coupling to a parameterized core heat balance and a radiative surface boundary condition. These enhancements have been made to the numerical code StagYY (Tackley, PEPI 2008). We present results for the evolution of an Earth-like planet from a molten initial state to present day, while testing the effect of uncertainties in parameters such as melt-solid density differences, surface heat loss and efficiency of turbulent mixing. Our results show rapid cooling and crystallization until the rheological transition then much slower

Early evolution and dynamics of Earth from a molten initial stage

NASA Astrophysics Data System (ADS)

Lourenço, Diogo; Tackley, Paul

2015-04-01

It is now well established that most of the terrestrial planets underwent a magma ocean stage during their accretion. On Earth, it is probable that at the end of accretion, giant impacts like the hypothesised Moon-forming impact, together with other sources of heat, melted a substantial part of the mantle. The thermal and chemical evolution of the resulting magma ocean most certainly had dramatic consequences on the history of the planet. Considerable research has been done on magma oceans using simple 1-D models (e.g.: Abe, PEPI 1997; Solomatov, Treat. Geophys. 2007; Elkins-Tanton EPSL 2008). However, some aspects of the dynamics may not be adequately addressed in 1-D and require the use of 2-D or 3-D models. Moreover, new developments in mineral physics that indicate that melt can be denser than solid at high pressures (e.g.: de Koker et al., EPSL 2013) can have very important impacts on the classical views of the solidification of magma oceans (Labrosse et al., Nature 2007). The goal of our study is to understand and characterize the influence of melting on the long-term thermo-chemical evolution of rocky planet interiors, starting from an initial molten state (magma ocean). Our approach is to model viscous creep of the solid mantle, while parameterizing processes that involve melt as previously done in 1-D models, including melt-solid separation at all melt fractions, the use of an effective diffusivity to parameterize turbulent mixing, coupling to a parameterized core heat balance and a radiative surface boundary condition. These enhancements have been made to the numerical code StagYY (Tackley, PEPI 2008). We will present results for the evolution of an Earth-like planet from a molten initial state to present day, while testing the effect of uncertainties in parameters such as melt-solid density differences, surface heat loss and efficiency of turbulent mixing. Our results show rapid cooling and crystallization until the rheological transition then much

Early evolution and dynamics of Earth from a molten initial stage

NASA Astrophysics Data System (ADS)

Louro Lourenço, D. J.; Tackley, P. J.

2014-12-01

It is now well established that most of the terrestrial planets underwent a magma ocean stage during their accretion. On Earth, it is probable that at the end of accretion, giant impacts like the hypothesised Moon-forming impact, together with other sources of heat, melted a substantial part of the mantle. The thermal and chemical evolution of the resulting magma ocean most certainly had dramatic consequences on the history of the planet. Considerable research has been done on magma oceans using simple 1-D models (e.g.: Abe, PEPI 1997; Solomatov, Treat. Geophys. 2007; Elkins-Tanton EPSL 2008). However, some aspects of the dynamics may not be adequately addressed in 1-D and require the use of 2-D or 3-D models. Moreover, new developments in mineral physics that indicate that melt can be denser than solid at high pressures (e.g.: de Koker et al., EPSL 2013) can have very important impacts on the classical views of the solidification of magma oceans (Labrosse et al., Nature 2007). The goal of our study is to understand and characterize the influence of melting on the long-term thermo-chemical evolution of rocky planet interiors, starting from an initial molten state (magma ocean). Our approach is to model viscous creep of the solid mantle, while parameterizing processes that involve melt as previously done in 1-D models, including melt-solid separation at all melt fractions, the use of an effective diffusivity to parameterize turbulent mixing, coupling to a parameterized core heat balance and a radiative surface boundary condition. These enhancements have been made to the numerical code StagYY (Tackley, PEPI 2008). We will present results for the evolution of an Earth-like planet from a molten initial state to present day, while testing the effect of uncertainties in parameters such as melt-solid density differences, surface heat loss and efficiency of turbulent mixing. Our results show rapid cooling and crystallization until the rheological transition then much

SWS2 visual pigment evolution as a test of historically contingent patterns of plumage color evolution in Warblers

PubMed Central

Bloch, Natasha I.; Morrow, James M.; Chang, Belinda S.W.; Price, Trevor D.

2014-01-01

Distantly related clades that occupy similar environments may differ due to the lasting imprint of their ancestors – historical contingency. The New World warblers (Parulidae) and Old World warblers (Phylloscopidae) are ecologically similar clades that differ strikingly in plumage coloration. We studied genetic and functional evolution of the short-wavelength sensitive visual pigments (SWS2 and SWS1) to ask if altered color perception could contribute to the plumage color differences between clades. We show SWS2 is short-wavelength shifted in birds that occupy open environments, such as finches, compared to those in closed environments, including warblers. Phylogenetic reconstructions indicate New World warblers were derived from a finch-like form that colonized from the Old World 15-20Ma. During this process the SWS2 gene accumulated 6 substitutions in branches leading to New World warblers, inviting the hypothesis that passage through a finch-like ancestor resulted in SWS2 evolution. In fact, we show spectral tuning remained similar across warblers as well as the finch ancestor. Results reject the hypothesis of historical contingency based on opsin spectral tuning, but point to evolution of other aspects of visual pigment function. Using the approach outlined here, historical contingency becomes a generally testable theory in systems where genotype and phenotype can be connected. PMID:25496318

BL Lacertae: X-ray spectral evolution and a black-hole mass estimate

NASA Astrophysics Data System (ADS)

Titarchuk, Lev; Seifina, Elena

2017-06-01

We present an analysis of the spectral properties observed in X-rays from active galactic nucleus BL Lacertae using RXTE, Suzaku, ASCA, BeppoSAX, and Swift observations. The total time covered by these observations is approximately 20 yr. We show strong observational evidence that this source undergoes X-ray spectral transitions from the low hard state (LHS) through the intermediate state (IS) to the high soft state (HSS) during these observations. During the RXTE observations (1997-2001, 180 ks, for a total 145 datasets), the source was approximately 75%, 20% and only 5% of the time in the IS, LHS, and HSS, respectively. We also used Swift observations (470 datasets, for a total 800 ks), which occurred during 12 yr (2005-2016), the broadband (0.3-200 keV) data of BeppoSAX (1997-2000, 160 ks), and the low X-ray energy (0.3-10 keV) data of ASCA (1995-1999, 160 ks). Two observations of Suzaku (2006, 2013; 50 ks) in combinations with long-term RXTE and Swift data-sets fortunately allow us to describe all spectral states of BL Lac. The spectra of BL Lac are well fitted by the so-called bulk motion Comptonization (BMC) model for all spectral states. We have established the photon index saturation level, Γsat = 2.2 ± 0.1, in the Γ versus mass accretion rate (Ṁ) correlation. This Γ - Ṁ correlation allows us to estimate the black-hole (BH) mass in BL Lac to be MBH 3 × 107M⊙ for a distance of 300 Mpc. For the BH mass estimate, we use the scaling method taking stellar-mass Galactic BHs 4U 1543-47 and GX 339-4 as reference sources. The Γ - Ṁ correlation revealed in BL Lac is similar to those in a number of stellar-mass Galactic BHs and two recently studied intermediate-mass extragalactic BHs. It clearly shows the correlation along with the very extended Γ saturation at 2.2. This is robust observational evidence for the presence of a BH in BL Lac. We also reveal that the seed (disk) photon temperatures are relatively low, of order of 100 eV, which are consistent

Exploring the Hydrothermal System in the Chicxulub Crater and Implications for the Early Evolution of Life on Earth

NASA Astrophysics Data System (ADS)

Kring, D. A.; Schmieder, M.; Tikoo, S.; Riller, U. P.; Simpson, S. L.; Osinski, G.; Cockell, C. S.; Coolen, M.; Gulick, S. P. S.; Morgan, J. V.

2017-12-01

Impact cratering, particularly large basin-size craters with diameters >100 km, have the potential to generate vast subsurface hydrothermal systems. There were dozens of such impacts during the Hadean and early Archean, some of which vaporized seas for brief periods of time, during which the safest niches for early life may have been in those subsurface hydrothermal systems. The Chicxulub crater can serve as a proxy for those events. New IODP-ICDP core recovered by Expedition 364 reveals a high-temperature (>300 degree C) system that may have persisted for more than 100,000 years. Of order 105 to 106 km3 of crust was structurally deformed, melted, and vaporized within about 10 minutes of the impact. The crust had to endure immense strain rates of 104/s to 106/s, up to 12 orders of magnitude greater than those associated with igneous and metamorphic processes. The outcome is a porous, permeable region that is a perfect host for hydrothermal circulation across the entire diameter of the crater to depths up to 5 or 6 km. The target rocks at Chicxulub are composed of an 3 km-thick carbonate platform sequence over a crystalline basement composed of igneous granite, granodiorite, and a few other intrusive components, such as dolerite, and metamorphic assemblages composed, in part, of gneiss and mica schist. Post-impact hydrothermal alteration includes Ca-Na- and K-metasomatism, pervasive hydration to produce layered silicates, and lower-temperature vug-filling zeolites as the system cycled from high temperatures to low temperatures. While the extent of granitic crust on early Earth is still debated and, thus, the direct application of those mineral reactions to the Hadean and early Archean can be debated, the thermal evolution of the system should be applicable to diverse crustal compositions. It is important to point out that pre-impact thermal conditions of Hadean and early Archean crust can affect the size of an impact basin and, in turn, the proportion of that basin

Palaeogeographic evolution of the central segment of the South Atlantic during Early Cretaceous times: palaeotopographic and geodynamic implications

NASA Astrophysics Data System (ADS)

Chaboureau, A. C.; Guillocheau, F.; Robin, C.; Rohais, S.; Moulin, M.; Aslanian, D.

2012-04-01

The tectonic and sedimentary evolution of the Early Cretaceous rift of the central segment of the South Atlantic Ocean is debated. Our objective is to better constraint the timing of its evolution by drawing palaeogeographic and deformation maps. Eight palaeogeographic and deformations maps were drawn from the Berriasian to the Middle-Late Aptian, based on a biostratigraphic (ostracodes and pollens) chart recalibrated on absolute ages (chemostratigraphy, interstratified volcanics, Re-Os dating of the organic matter). The central segment of the South Atlantic is composed of two domains that have a different history in terms of deformation and palaeogeography. The southern domain includes Namibe, Santos and Campos Basins. The northern domain extends from Espirito Santo and North Kwanza Basins, in the South, to Sergipe-Alagoas and North Gabon Basins to the North. Extension started in the northern domain during Late Berriasian (Congo-Camamu Basin to Sergipe-Alagoas-North Gabon Basins) and migrated southward. At that time, the southern domain was not a subsiding domain. This is time of emplacement of the Parana-Etendeka Trapp (Late Hauterivian-Early Barremian). Extension started in this southern domain during Early Barremian. The brittle extensional period is shorter in the South (5-6 Ma, Barremian to base Aptian) than in the North (19 to 20 Myr, Upper Berriasian to Base Aptian). From Late Berriasian to base Aptian, the northern domain evolves from a deep lake with lateral highs to a shallower one, organic-rich with no more highs. The lake migrates southward in two steps, until Valanginian at the border between the northern and southern domains, until Early Barremian, North of Walvis Ridge. The Sag phase is of Middle to Late Aptian age. In the southern domain, the transition between the brittle rift and the sag phase is continuous. In the northern domain, this transition corresponds to a hiatus of Early to Middle Aptian age, possible period of mantle exhumation. Marine

Physiology and Evolution of Voltage-Gated Calcium Channels in Early Diverging Animal Phyla: Cnidaria, Placozoa, Porifera and Ctenophora

PubMed Central

Senatore, Adriano; Raiss, Hamad; Le, Phuong

2016-01-01

Voltage-gated calcium (Cav) channels serve dual roles in the cell, where they can both depolarize the membrane potential for electrical excitability, and activate transient cytoplasmic Ca2+ signals. In animals, Cav channels play crucial roles including driving muscle contraction (excitation-contraction coupling), gene expression (excitation-transcription coupling), pre-synaptic and neuroendocrine exocytosis (excitation-secretion coupling), regulation of flagellar/ciliary beating, and regulation of cellular excitability, either directly or through modulation of other Ca2+-sensitive ion channels. In recent years, genome sequencing has provided significant insights into the molecular evolution of Cav channels. Furthermore, expanded gene datasets have permitted improved inference of the species phylogeny at the base of Metazoa, providing clearer insights into the evolution of complex animal traits which involve Cav channels, including the nervous system. For the various types of metazoan Cav channels, key properties that determine their cellular contribution include: Ion selectivity, pore gating, and, importantly, cytoplasmic protein-protein interactions that direct sub-cellular localization and functional complexing. It is unclear when these defining features, many of which are essential for nervous system function, evolved. In this review, we highlight some experimental observations that implicate Cav channels in the physiology and behavior of the most early-diverging animals from the phyla Cnidaria, Placozoa, Porifera, and Ctenophora. Given our limited understanding of the molecular biology of Cav channels in these basal animal lineages, we infer insights from better-studied vertebrate and invertebrate animals. We also highlight some apparently conserved cellular functions of Cav channels, which might have emerged very early on during metazoan evolution, or perhaps predated it. PMID:27867359

The role of hard turbulent thermal convection in the Earth's early thermal evolution

NASA Technical Reports Server (NTRS)

Hansen, Ulli; Yuen, David A.; Zhao, Wuling; Malevsky, Andrei V.

1992-01-01

In the last several years great progress was made in the study of a new transition in thermal convection, called hard turbulence. Initial experiments were conducted with helium gas, then with water. It was shown that for base-heated Newtonian convection a transition occurred at Rayleigh numbers between 10(exp 7) and 10(exp 8). This transition is characterized by the appearance of disconnected plume structures in contrast to continuous plumes with mushroom-shaped tops found for lower Rayleigh numbers. This new hydrodynamic transition is expected to play an important role in reshaping our concepts of mantle convection in the early stages of planetary evolution. We have conducted two-dimensional calculations for large and small aspect-ratio configuration to see whether such a transition would take place for infinite Prandtl number fluids.

ON THE LATE-TIME SPECTRAL SOFTENING FOUND IN X-RAY AFTERGLOWS OF GAMMA-RAY BURSTS

DOE Office of Scientific and Technical Information (OSTI.GOV)

Wang, Yuan-Zhu; Liang, En-Wei; Lu, Zu-Jia

2016-02-20

Strong spectral softening has been revealed in the late X-ray afterglows of some gamma-ray bursts (GRBs). The scenario of X-ray scattering around the circumburst dusty medium has been supported by previous works due to its overall successful prediction of both the temporal and spectral evolution of some X-ray afterglows. To further investigate the observed feature of spectral softening we now systematically search the X-ray afterglows detected by the X-ray telescope aboard Swift and collect 12 GRBs with significant late-time spectral softening. We find that dust scattering could be the dominant radiative mechanism for these X-ray afterglows regarding their temporal andmore » spectral features. For some well-observed bursts with high-quality data, the time-resolved spectra could be well-produced within the scattering scenario by taking into account the X-ray absorption from the circumburst medium. We also find that during spectral softening the power-law index in the high-energy end of the spectra does not vary much. The spectral softening is mainly manifested by the spectral peak energy continually moving to the soft end.« less

Dynamics and early post-tsunami evolution of floating marine debris near Fukushima Daiichi

NASA Astrophysics Data System (ADS)

Matthews, John Philip; Ostrovsky, Lev; Yoshikawa, Yutaka; Komori, Satoru; Tamura, Hitoshi

2017-08-01

The devastating tsunami triggered by the Tōhoku-Oki earthquake of 11 March 2011 caused a crisis at the Fukushima Daiichi nuclear power station where it overtopped the seawall defences. On retreating, the tsunami carried loose debris and wreckage seaward and marshalled buoyant material into extensive plumes. Widespread concern over the fate of these and numerous other Tōhoku tsunami depositions prompted attempts to simulate debris dispersion throughout the wider Pacific. However, the effects of locally perturbed wind and wave fields, active Langmuir circulation and current-induced attrition determine a complex and poorly understood morphology for large floating agglomerations. Here we show that the early post-tsunami evolution of marine-debris plumes near Fukushima Daiichi was also shaped by near-surface wind modifications that took place above relatively calm (lower surface roughness) waters covered by surface films derived from oil and other contaminants. High-spatial-resolution satellite tracking reveals faster-than-expected floating-debris motions and invigorated plume evolution within these regions, while numerical modelling of turbulent air flow over the low-drag, film-covered surface predicts typically metre-per-second wind strengthening at centimetric heights, sufficient to explain the observed debris-speed increases. Wind restructuring probably stimulates the dispersion of flotsam from both biological and anthropogenic sources throughout a global ocean of highly variable surface roughness.

EXPLORING DATA-DRIVEN SPECTRAL MODELS FOR APOGEE M DWARFS

NASA Astrophysics Data System (ADS)

Lua Birky, Jessica; Hogg, David; Burgasser, Adam J.; Jessica Birky

2018-01-01

The Cannon (Ness et al. 2015; Casey et al. 2016) is a flexible, data-driven spectral modeling and parameter inference framework, demonstrated on high-resolution Apache Point Galactic Evolution Experiment (APOGEE; λ/Δλ~22,500, 1.5-1.7µm) spectra of giant stars to estimate stellar labels (Teff, logg, [Fe/H], and chemical abundances) to precisions higher than the model-grid pipeline. The lack of reliable stellar parameters reported by the APOGEE pipeline for temperatures less than ~3550K, motivates extension of this approach to M dwarf stars. Using a training set of 51 M dwarfs with spectral types ranging M0-M9 obtained from SDSS optical spectra, we demonstrate that the Cannon can infer spectral types to a precision of +/-0.6 types, making it an effective tool for classifying high-resolution near-infrared spectra. We discuss the potential for extending this work to determine the physical stellar labels Teff, logg, and [Fe/H].This work is supported by the SDSS Faculty and Student (FAST) initiative.

SPECTRAL ANALYSIS OF FERMI -LAT BLAZARS ABOVE 50 GEV

DOE PAGES

Domínguez, Alberto; Ajello, Marco

2015-11-04

We present an analysis of the intrinsic (unattenuated by the extragalactic background light, EBL) power-law spectral indices of 128 extragalactic sources detected up to z ~ 2 with the Fermi-Large Area Telescope (LAT) at very high energies (VHEs, E ≥50 GeV). The median of the intrinsic index distribution is 2.20 (versus 2.54 for the observed distribution). We also analyze the observed spectral breaks (i.e., the difference between the VHE and high energy, HE, 100 MeV ≤ E ≤ 300 GeV, spectral indices). The Fermi-LAT has now provided a large sample of sources detected both at VHE and HE with comparablemore » exposure that allows us to test models of extragalactic γ-ray photon propagation. We find that our data are compatible with simulations that include intrinsic blazar curvature and EBL attenuation. There is also no evidence of evolution with redshift of the physics that drives the photon emission in high-frequency synchrotron peak (HSP) blazars. This makes HSP blazars excellent probes of the EBL.« less

Evolution of the inner asteroid belt: Paradigms and paradoxes from spectral studies

NASA Technical Reports Server (NTRS)

Gaffey, Michael J.

1987-01-01

Recent years have witnessed a significant increase in the sophistication of asteroidal surface material characterizations derived from spectral data. An extensive data base of moderate to high spectral resolution, visible and near-infrared asteroid spectra is now available. Interpretive methodologies and calibrations were developed to determine phase abundance and composition in olivine-pyroxene assemblages and to estimate NiFe metal abundance from such spectra. A modified version of the asteroid classifications system more closely parallels the mineralogic variations of the major inner belt asteroid types. These improvements permit several general conclusions to be drawn concerning the nature of inner belt objects; their history, and that of the inner solar system; and the relationship between the asteroids and meteorites. Essentially all large belt asteroids have or are fragments of parent bodies which have undergone strong post-accretionary heating, varying degrees of melting and magmatic differentiation, and subsequent collisional disruption. These asteroids show a systematic, but not yet well characterized, mineralogic variation with semi-major axis. This suggests that the S-type asteroid families represent relatively recent collisions onto the cores of previously disrupted parent bodies.

Preliminary measurements of spectral signatures of tropical and temperate plants in the thermal infrared

NASA Technical Reports Server (NTRS)

Salisbury, John W.; Milton, N. M.

1987-01-01

Spectral reflectance measurements of seven tropical species and six deciduous species were carried out in thermal infrared to establish the species-dependent spectral characteristics and to investigate the effect on spectral signatures of environmental variables, such as leaf maturity, drought, and metal stress. Seasonal variations of spectral signatures occurred between spring and summer leaves, but such variations were minimal during summer and early fall. Overall reflectance of senescent leaves was higher than that of young leaves, as was the reflectance of leaves from trees growing in metal-enriched soils, as compared with leaves from the control area. However, the characteristic spectral features were not changed in either case. It was also found that water stress did not have any effect on the infrared signatures: trees grown during a drought season maintained their characteristic spectral signatures.

The origin and early evolution of vascular plant shoots and leaves.

PubMed

Harrison, C Jill; Morris, Jennifer L

2018-02-05

The morphology of plant fossils from the Rhynie chert has generated longstanding questions about vascular plant shoot and leaf evolution, for instance, which morphologies were ancestral within land plants, when did vascular plants first arise and did leaves have multiple evolutionary origins? Recent advances combining insights from molecular phylogeny, palaeobotany and evo-devo research address these questions and suggest the sequence of morphological innovation during vascular plant shoot and leaf evolution. The evidence pinpoints testable developmental and genetic hypotheses relating to the origin of branching and indeterminate shoot architectures prior to the evolution of leaves, and demonstrates underestimation of polyphyly in the evolution of leaves from branching forms in 'telome theory' hypotheses of leaf evolution. This review discusses fossil, developmental and genetic evidence relating to the evolution of vascular plant shoots and leaves in a phylogenetic framework.This article is part of a discussion meeting issue 'The Rhynie cherts: our earliest terrestrial ecosystem revisited'. © 2017 The Authors.

The origin and early evolution of vascular plant shoots and leaves

PubMed Central

2018-01-01

The morphology of plant fossils from the Rhynie chert has generated longstanding questions about vascular plant shoot and leaf evolution, for instance, which morphologies were ancestral within land plants, when did vascular plants first arise and did leaves have multiple evolutionary origins? Recent advances combining insights from molecular phylogeny, palaeobotany and evo–devo research address these questions and suggest the sequence of morphological innovation during vascular plant shoot and leaf evolution. The evidence pinpoints testable developmental and genetic hypotheses relating to the origin of branching and indeterminate shoot architectures prior to the evolution of leaves, and demonstrates underestimation of polyphyly in the evolution of leaves from branching forms in ‘telome theory’ hypotheses of leaf evolution. This review discusses fossil, developmental and genetic evidence relating to the evolution of vascular plant shoots and leaves in a phylogenetic framework. This article is part of a discussion meeting issue ‘The Rhynie cherts: our earliest terrestrial ecosystem revisited’. PMID:29254961

Building and Characterizing Volcanic Landscapes with a Numerical Landscape Evolution Model and Spectral Techniques

NASA Astrophysics Data System (ADS)

Richardson, P. W.; Karlstrom, L.

2016-12-01

The competition between constructional volcanic processes such as lava flows, cinder cones, and tumuli compete with physical and chemical erosional processes to control the morphology of mafic volcanic landscapes. If volcanic effusion rates are high, these landscapes are primarily constructional, but over the timescales associated with hot spot volcanism (1-10 Myr) and arcs (10-50 Myr), chemical and physical erosional processes are important. For fluvial incision to occur, initially high infiltration rates must be overcome by chemical weathering or input of fine-grained sediment. We investigate lava flow resurfacing, using a new lava flow algorithm that can be calibrated for specific flows and eruption magnitude/frequency relationships, into a landscape evolution model to complete two modeling experiments to investigate the interplay between volcanic resurfacing and fluvial incision. We use a stochastic spatial vent distribution calibrated from the Hawaiian eruption record to resurface a synthetically produced ocean island. In one experiment, we investigate the consequences of including time-dependent channel incision efficiency. This effectively mimics the behavior of transient hydrological development of lava flows. In the second experiment, we explore the competition between channel incision and lava flow resurfacing. The relative magnitudes of channel incision versus lava flow resurfacing are captured in landscape topography. For example, during the shield building period for ocean islands, effusion rates are high and the signature of lava flow resurfacing dominates. In contrast, after the shield building phase, channel incision begins and eventually dominates the topographic signature. We develop a dimensionless ratio of resurfacing rate to erosion rate to characterize the transition between these processes. We use spectral techniques to characterize volcanic features and to pinpoint the transition between constructional and erosional morphology on modeled

Archean sedimentary styles and early crustal evolution

NASA Technical Reports Server (NTRS)

Lowe, D. R.

1986-01-01

The distinctions between and implications of early and late Archean sedimentary styles are presented. Early Archean greenstone belts, such as the Barberton of South Africa and those in the eastern Pilbar Block of Australia are characterized by fresh or slightly reworked pyroclastic debris, orthochemical sediments such as carbonates, evaporites, and silica, and biogenic deposits including cherts and stromatolitic units. Terrigenous deposits are rare, and it is suggested that early Archean sediments were deposited on shallow simatic platforms, with little or no components derived from sialic sources. In contrast, late Archean greenstone belts in the Canadian Shield and the Yilgarn Block of Australia contain coarse terrigenous clastic rocks including conglomerate, sandstone, and shale derived largely from sialic basement. Deposition appears to have taken place in deepwater, tectonically unstable environments. These observations are interpreted to indicate that the early Archean greenstone belts formed as anorogenic, shallow water, simatic platforms, with little or no underlying or adjacent continental crust, an environment similar to modern oceanic islands formed over hot spots.

Age of acquisition predicts rate of lexical evolution.

PubMed

Monaghan, Padraic

2014-12-01

The processes taking place during language acquisition are proposed to influence language evolution. However, evidence demonstrating the link between language learning and language evolution is, at best, indirect, constituting studies of laboratory-based artificial language learning studies or computational simulations of diachronic change. In the current study, a direct link between acquisition and evolution is established, showing that for two hundred fundamental vocabulary items, the age at which words are acquired is a predictor of the rate at which they have changed in studies of language evolution. Early-acquired words are more salient and easier to process than late-acquired words, and these early-acquired words are also more stably represented within the community's language. Analysing the properties of these early-acquired words potentially provides insight into the origins of communication, highlighting features of words that have been ultra-conserved in language. Copyright © 2014 Elsevier B.V. All rights reserved.

The origin of the animals and a 'Savannah' hypothesis for early bilaterian evolution.

PubMed

Budd, Graham E; Jensen, Sören

2017-02-01

The earliest evolution of the animals remains a taxing biological problem, as all extant clades are highly derived and the fossil record is not usually considered to be helpful. The rise of the bilaterian animals recorded in the fossil record, commonly known as the 'Cambrian explosion', is one of the most significant moments in evolutionary history, and was an event that transformed first marine and then terrestrial environments. We review the phylogeny of early animals and other opisthokonts, and the affinities of the earliest large complex fossils, the so-called 'Ediacaran' taxa. We conclude, based on a variety of lines of evidence, that their affinities most likely lie in various stem groups to large metazoan groupings; a new grouping, the Apoikozoa, is erected to encompass Metazoa and Choanoflagellata. The earliest reasonable fossil evidence for total-group bilaterians comes from undisputed complex trace fossils that are younger than about 560 Ma, and these diversify greatly as the Ediacaran-Cambrian boundary is crossed a few million years later. It is generally considered that as the bilaterians diversified after this time, their burrowing behaviour destroyed the cyanobacterial mat-dominated substrates that the enigmatic Ediacaran taxa were associated with, the so-called 'Cambrian substrate revolution', leading to the loss of almost all Ediacara-aspect diversity in the Cambrian. Why, though, did the energetically expensive and functionally complex burrowing mode of life so typical of later bilaterians arise? Here we propose a much more positive relationship between late-Ediacaran ecologies and the rise of the bilaterians, with the largely static Ediacaran taxa acting as points of concentration of organic matter both above and below the sediment surface. The breaking of the uniformity of organic carbon availability would have signalled a decisive shift away from the essentially static and monotonous earlier Ediacaran world into the dynamic and burrowing world

FUV Spectral Signatures of Molecules and the Evolution of the Gaseous Coma of Comet 67P/Churyumov–Gerasimenko

NASA Astrophysics Data System (ADS)

Feldman, Paul D.; A’Hearn, Michael F.; Bertaux, Jean-Loup; Feaga, Lori M.; Keeney, Brian A.; Knight, Matthew M.; Noonan, John; Parker, Joel Wm.; Schindhelm, Eric; Steffl, Andrew J.; Stern, S. Alan; Vervack, Ronald J.; Weaver, Harold A.

2018-01-01

The Alice far-ultraviolet imaging spectrograph onboard Rosetta observed emissions from atomic and molecular species from within the coma of comet 67P/Churyumov–Gerasimenko during the entire escort phase of the mission from 2014 August to 2016 September. The initial observations showed that emissions of atomic hydrogen and oxygen close to the surface were produced by energetic electron impact dissociation of H2O. Following delivery of the lander, Philae, on 2014 November 12, the trajectory of Rosetta shifted to near-terminator orbits that allowed for these emissions to be observed against the shadowed nucleus that, together with the compositional heterogeneity, enabled us to identify unique spectral signatures of dissociative electron impact excitation of H2O, CO2, and O2. CO emissions were found to be due to both electron and photoexcitation processes. Thus, we are able, from far-ultraviolet spectroscopy, to qualitatively study the evolution of the primary molecular constituents of the gaseous coma from start to finish of the escort phase. Our results show asymmetric outgassing of H2O and CO2 about perihelion, H2O dominant before and CO2 dominant after, consistent with the results from both the in situ and other remote sensing instruments on Rosetta.

A dinosaur missing-link? Chilesaurus and the early evolution of ornithischian dinosaurs.

PubMed

Baron, Matthew G; Barrett, Paul M

2017-08-01

The enigmatic dinosaur taxon Chilesaurus diegosuarezi was originally described as a tetanuran theropod, but this species possesses a highly unusual combination of features that could provide evidence of alternative phylogenetic positions within the clade. In order to test the relationships of Chilesaurus , we added it to a new dataset of early dinosaurs and other dinosauromorphs. Our analyses recover Chilesaurus in a novel position, as the earliest diverging member of Ornithischia, rather than a tetanuran theropod. The basal position of Chilesaurus within the clade and its suite of anatomical characters suggest that it might represent a 'transitional' taxon, bridging the morphological gap between Theropoda and Ornithischia, thereby offering potential insights into the earliest stages of ornithischian evolution, which were previously obscure. For example, our results suggest that pubic retroversion occurred prior to some of the craniodental and postcranial modifications that previously diagnosed the clade (e.g. the presence of a predentary bone and ossified tendons). © 2017 The Author(s).

Effects of distributions of energy of transfer rates on spectral hole burning in photosynthetic pigment-protein complexes

NASA Astrophysics Data System (ADS)

Ahmouda, Somaya

To perform photosynthesis, plants, algae and bacteria possess well organized and closely coupled photosynthetic pigment-protein complexes. Information on energy transfer in photosynthetic complexes is important to understand their functioning and possibly to design new and improved photovoltaic devices. The information on energy transfer processes contained in the narrow zero-phonon lines at low temperatures is hidden under the inhomogeneous broadening. Thus, it has been proven difficult to analyze the spectroscopic properties of these complexes in sufficient detail by conventional spectroscopy methods. In this context the high resolution spectroscopy techniques such as Spectral Hole Burning are powerful tools designed to get around the inhomogeneous broadening. Spectral Hole Burning involves selective excitation by a laser which removes molecules with the zero-phonon transitions resonant with this laser. This thesis focuses on the effects of the distributions of the energy transfer rates (homogeneous line widths) on the evolution of spectral holes. These distributions are a consequence of the static disorder in the photosynthetic pigment-protein complexes. The qualitative effects of different types of the line width distributions on the evolution of spectral holes have been and explored by numerical simulations, an example of analysis of the original experimental data has been presented as well.

Aural exostoses (surfer's ear) provide vital fossil evidence of an aquatic phase in Man's early evolution.

PubMed

Rhys Evans, P H; Cameron, M

2017-11-01

For over a century, otolaryngologists have recognised the condition of aural exostoses, but their significance and aetiology remains obscure, although they tend to be associated with frequent swimming and cold water immersion of the auditory canal. The fact that this condition is usually bilateral is predictable since both ears are immersed in water. However, why do exostoses only grow in swimmers and why do they grow in the deep bony meatus at two or three constant sites? Furthermore, from an evolutionary point of view, what is or was the purpose and function of these rather incongruous protrusions? In recent decades, paleoanthropological evidence has challenged ideas about early hominid evolution. In 1992 the senior author suggested that aural exostoses were evolved in early hominid Man for protection of the delicate tympanic membrane during swimming and diving by narrowing the ear canal in a similar fashion to other semiaquatic species. We now provide evidence for this theory and propose an aetiological explanation for the formation of exostoses.

Supermassive blackhole growth and the supernovae history in high-z early-type galaxies

NASA Astrophysics Data System (ADS)

Rocca-Volmerange, Brigitte

2015-08-01

A large variety of feedback models, supported by many galaxy surveys, tentatively relate AGN to star formation by stimulation or quenching. However any accretion process from variable AGNs has never been observed to be turned on or off by star formation. We propose to follow the supernovae explosions through the star formation laws of early-type galaxies with the help of the galaxy evolution model Pégase.3. Applied to the continuous Spectral Energy Distribution, including Herschel data of two z=3.8 radio galaxies (4C41.17 and TN J2007-1316), the comparison with Supermassive BlackHole masses from SDSS opens a new interpretation of the AGN-starburst relation without any need of feedback (Rocca-Volmerange et al, 2015, 2013)

Convective radiation fluid-dynamics: formation and early evolution of ultra low-mass objects

NASA Astrophysics Data System (ADS)

Wuchterl, G.

2005-12-01

The formation process of ultra low-mass objects is some kind of extension of the star formation process. The physical changes towards lower mass are discussed by investigating the collapse of cloud cores that are modelled as Bonnor-Ebert spheres. Their collapse is followed by solving the equations of fluid dynamics with radiation and a model of time-dependent convection that has been calibrated to the Sun. For a sequence of cloud-cores with 1 to 0.01 solar masses, evolutionary tracks and isochrones are shown in the mass-radius diagram, the Hertzsprung-Russel diagram and the effective temperature-surface gravity or Kiel diagram. The collapse and the early hydrostatic evolution to ages of few Ma are briefly discussed and compared to observations of objects in Upper Scorpius and the low-mass components of GG Tau.

Evolution of animal and plant dicers: early parallel duplications and recurrent adaptation of antiviral RNA binding in plants.

PubMed

Mukherjee, Krishanu; Campos, Henry; Kolaczkowski, Bryan

2013-03-01

RNA interference (RNAi) is a eukaryotic molecular system that serves two primary functions: 1) gene regulation and 2) protection against selfish elements such as viruses and transposable DNA. Although the biochemistry of RNAi has been detailed in model organisms, very little is known about the broad-scale patterns and forces that have shaped RNAi evolution. Here, we provide a comprehensive evolutionary analysis of the Dicer protein family, which carries out the initial RNA recognition and processing steps in the RNAi pathway. We show that Dicer genes duplicated and diversified independently in early animal and plant evolution, coincident with the origins of multicellularity. We identify a strong signature of long-term protein-coding adaptation that has continually reshaped the RNA-binding pocket of the plant Dicer responsible for antiviral immunity, suggesting an evolutionary arms race with viral factors. We also identify key changes in Dicer domain architecture and sequence leading to specialization in either gene-regulatory or protective functions in animal and plant paralogs. As a whole, these results reveal a dynamic picture in which the evolution of Dicer function has driven elaboration of parallel RNAi functional pathways in animals and plants.

Early 20th-century research at the interfaces of genetics, development, and evolution: reflections on progress and dead ends.

PubMed

Deichmann, Ute

2011-09-01

Three early 20th-century attempts at unifying separate areas of biology, in particular development, genetics, physiology, and evolution, are compared in regard to their success and fruitfulness for further research: Jacques Loeb's reductionist project of unifying approaches by physico-chemical explanations; Richard Goldschmidt's anti-reductionist attempts to unify by integration; and Sewall Wright's combination of reductionist research and vision of hierarchical genetic systems. Loeb's program, demanding that all aspects of biology, including evolution, be studied by the methods of the experimental sciences, proved highly successful and indispensible for higher level investigations, even though evolutionary change and properties of biological systems up to now cannot be fully explained on the molecular level alone. Goldschmidt has been appraised as pioneer of physiological and developmental genetics and of a new evolutionary synthesis which transcended neo-Darwinism. However, this study concludes that his anti-reductionist attempts to integrate genetics, development and evolution have to be regarded as failures or dead ends. His grand speculations were based on the one hand on concepts and experimental systems that were too vague in order to stimulate further research, and on the other on experiments which in their core parts turned out not to be reproducible. In contrast, Sewall Wright, apart from being one of the architects of the neo-Darwinian synthesis of the 1930s, opened up new paths of testable quantitative developmental genetic investigations. He placed his research within a framework of logical reasoning, which resulted in the farsighted speculation that examinations of biological systems should be related to the regulation of hierarchical genetic subsystems, possibly providing a mechanism for development and evolution. I argue that his suggestion of basing the study of systems on clearly defined properties of the components has proved superior to

Possible tidal resonance of the early Earth's ocean due to the lunar orbit evolution

NASA Astrophysics Data System (ADS)

Motoyama, M.; Tsunakawa, H.; Takahashi, F.

2016-12-01

The ocean tide is one of the most important factors affecting the Earth's surface environment and the evolution of the Earth-Moon system (e.g. Goldreich, 1966). According to the Giant Impact hypothesis, the Moon was formed very near the Earth 4.6 billion years ago (Hartmann and Davis, 1979). At that time, the tidal force would be about several thousand times as strong as the present. However previous studies pointed out that significant attenuation of tidal waves might have occurred due to mechanical response of water motion (e.g. Hansen, 1982; Abe and Ooe, 2001), resulting in relatively calm state like the present ocean.In the present study, we analyze tidal response of the ocean on the early Earth using a model of constant-depth ocean covering all the surface of the rigid Earth. The examined modes of response are not only M2 corresponding to spherical harmonics Y22 but also others such as Y21, since the lunar orbital plane would be inclined.First, estimated is an ocean depth for possible resonance of the individual mode. Eigen frequencies of the fluid on a rotating sphere with no friction are calculated on the basis of previous study (Longuet-Higgins, 1968). These frequencies depend on the Earth's rotation rate and the ocean depth. The Earth's rotation period is assumed to have changed from 5 hours to 24 hours for the past 4.6 billion years (e.g. Mignard, 1980; Stacey and Davis, 2008). It is found that resonance could occur for diurnal modes of Y21 and Y31 with reasonable depths of the ancient ocean (1300 - 5200 m).Then we obtain a 2D response function on a sphere with friction in order to estimate the tidal amplitude of the ocean for main modes . The response function in the present study shows good agreement with the numerical simulation result of the tidal torque response of M2 (Abe et al., 1997). The calculation results suggest that diurnal modes of Y21 and Y31 would grown on the early Earth, while the other modes would fairly be attenuated. In particular

The Size Evolution of Passive Galaxies: Observations From the Wide-Field Camera 3 Early Release Science Program

NASA Technical Reports Server (NTRS)

Ryan, R. E., Jr.; Mccarthy, P.J.; Cohen, S. H.; Yan, H.; Hathi, N. P.; Koekemoer, A. M.; Rutkowski, M. J.; Mechtley, M. R.; Windhorst, R. A.; O’Connell, R. W.;

The imprint of dark matter haloes on the size and velocity dispersion evolution of early-type galaxies

NASA Astrophysics Data System (ADS)

Posti, Lorenzo; Nipoti, Carlo; Stiavelli, Massimo; Ciotti, Luca

2014-05-01

Early-type galaxies (ETGs) are observed to be more compact, on average, at z ≳ 2 than at z ≃ 0, at fixed stellar mass. Recent observational works suggest that such size evolution could reflect the similar evolution of the host dark matter halo density as a function of the time of galaxy quenching. We explore this hypothesis by studying the distribution of halo central velocity dispersion (σ0) and half-mass radius (rh) as functions of halo mass M and redshift z, in a cosmological Λ cold dark matter N-body simulation. In the range 0 ≲ z ≲ 2.5, we find σ0∝M0.31-0.37 and rh∝M0.28-0.32, close to the values expected for homologous virialized systems. At fixed M in the range 1011 M⊙ ≲ M ≲ 5.5 × 1014 M⊙ we find σ0 ∝ (1 + z)0.35 and rh ∝ (1 + z)-0.7. We show that such evolution of the halo scaling laws is driven by individual haloes growing in mass following the evolutionary tracks σ0 ∝ M0.2 and rh ∝ M0.6, consistent with simple dissipationless merging models in which the encounter orbital energy is accounted for. We compare the N-body data with ETGs observed at 0 ≲ z ≲ 3 by populating the haloes with a stellar component under simple but justified assumptions: the resulting galaxies evolve consistently with the observed ETGs up to z ≃ 2, but the model has difficulty in reproducing the fast evolution observed at z ≳ 2. We conclude that a substantial fraction of the size evolution of ETGs can be ascribed to a systematic dependence on redshift of the dark matter haloes structural properties.

Detection of early landscape evolution through controlled experimentation, data analysis, and numerical modeling at the Landscape Evolution Observatory

NASA Astrophysics Data System (ADS)

Troch, Peter A.; Pangle, Luke; Niu, Guo-Yue; Dontsova, Katerina; Barron-Gafford, Greg; van Haren, Joost; Pavao-Zuckerman, Mitch

2014-05-01

The Landscape Evolution Observatory (LEO) at Biosphere 2-The University of Arizona consists of three identical, sloping, 333 m2 convergent landscapes inside a 5,000 m2 environmentally controlled facility. These engineered landscapes contain 1-meter depth of basaltic tephra, ground to homogenous loamy sand that will undergo physical, chemical, and mineralogical changes over many years. Each landscape contains a spatially dense sensor and sampler network capable of resolving meter-scale lateral heterogeneity and sub-meter scale vertical heterogeneity in moisture, energy and carbon states and fluxes. The density of sensors and frequency at which they can be polled allows for data collection at spatial and temporal scales that are impossible in natural field settings. Embedded solution and gas samplers allow for quantification of biogeochemical processes, and facilitate the use of chemical tracers to study water movement at very high spatial resolutions. Each ~600 metric ton landscape has load cells embedded into the structure to measure changes in total system mass with 0.05% full-scale repeatability (equivalent to less than 1 cm of precipitation). This facilitates the real time accounting of hydrological partitioning at the hillslope scale. Each hillslope is equipped with an engineered rain system capable of raining at rates between 3 and 45 mm/hr in a range of spatial patterns. The rain systems are capable of creating long-term steady state conditions or running complex simulations. The precipitation water supply storage system is flexibly designed to facilitate addition of tracers at constant or time-varying rates for any of the three hillslopes. This presentation will discuss detection of early landscape evolution in terms of hydrological, geochemical and microbial processes through controlled experimentation, data analysis, and numerical modeling during the commissioning phase of the first hillslope at LEO.

Approaches to Legacy System Evolution.

DTIC Science & Technology

1997-12-01

such as migrating legacy systems, to more distributed open environments. This framework draws out the important global issues early in the planning...ongoing system evolution initiatives, for drawing out important global issues early in the planning cycle using the checklists as a guide, and for

Detecting Non-Markovianity of Quantum Evolution via Spectra of Dynamical Maps.

PubMed

Chruściński, Dariusz; Macchiavello, Chiara; Maniscalco, Sabrina

2017-02-24

We provide an analysis on non-Markovian quantum evolution based on the spectral properties of dynamical maps. We introduce the dynamical analog of entanglement witness to detect non-Markovianity and we illustrate its behavior with several instructive examples. It is shown that for several important classes of dynamical maps the corresponding evolution of singular values and/or eigenvalues of the map provides a simple non-Markovianity witness.

Raman spectral properties of squamous cell carcinoma of oral tissues and cells

NASA Astrophysics Data System (ADS)

Su, L.; Sun, Y. F.; Chen, Y.; Chen, P.; Shen, A. G.; Wang, X. H.; Jia, J.; Zhao, Y. F.; Zhou, X. D.; Hu, J. M.

2012-01-01

Early diagnosis is the key of the improved survival rates of oral cancer. Raman spectroscopy is sensitive to the early changes of molecular composition and structure that occur in benign lesion during carcinogenesis. In this study, in situ Raman analysis provided distinct spectra that can be used to discriminate between normal and malignant tissues, as well as normal and cancer cells. The biochemical variations between different groups were analyzed by the characteristic bands by comparing the normalized mean spectra. Spectral profiles of normal, malignant conditions show pronounced differences between one another, and multiple Raman markers associated with DNA and protein vibrational modes have been identified that exhibit excellent discrimination power for cancer sample identification. Statistical analyses of the Raman data and classification using principal component analysis (PCA) are shown to be effective for the Raman spectral diagnosis of oral mucosal diseases. The results indicate that the biomolecular differences between normal and malignant conditions are more obviously at the cellular level. This technique could provide a research foundation for the Raman spectral diagnosis of oral mucosal diseases.

Spectral shifts of mammalian ultraviolet-sensitive pigments (short wavelength-sensitive opsin 1) are associated with eye length and photic niche evolution

PubMed Central

Emerling, Christopher A.; Huynh, Hieu T.; Nguyen, Minh A.; Meredith, Robert W.; Springer, Mark S.

2015-01-01

Retinal opsin photopigments initiate mammalian vision when stimulated by light. Most mammals possess a short wavelength-sensitive opsin 1 (SWS1) pigment that is primarily sensitive to either ultraviolet or violet light, leading to variation in colour perception across species. Despite knowledge of both ultraviolet- and violet-sensitive SWS1 classes in mammals for 25 years, the adaptive significance of this variation has not been subjected to hypothesis testing, resulting in minimal understanding of the basis for mammalian SWS1 spectral tuning evolution. Here, we gathered data on SWS1 for 403 mammal species, including novel SWS1 sequences for 97 species. Ancestral sequence reconstructions suggest that the most recent common ancestor of Theria possessed an ultraviolet SWS1 pigment, and that violet-sensitive pigments evolved at least 12 times in mammalian history. We also observed that ultraviolet pigments, previously considered to be a rarity, are common in mammals. We then used phylogenetic comparative methods to test the hypotheses that the evolution of violet-sensitive SWS1 is associated with increased light exposure, extended longevity and longer eye length. We discovered that diurnal mammals and species with longer eyes are more likely to have violet-sensitive pigments and less likely to possess UV-sensitive pigments. We hypothesize that (i) as mammals evolved larger body sizes, they evolved longer eyes, which limited transmittance of ultraviolet light to the retina due to an increase in Rayleigh scattering, and (ii) as mammals began to invade diurnal temporal niches, they evolved lenses with low UV transmittance to reduce chromatic aberration and/or photo-oxidative damage. PMID:26582021

The Bright Gamma-Ray Burst 991208: Tight Constraints on Afterglow Models from Observations of the Early-Time Radio Evolution

NASA Astrophysics Data System (ADS)

Galama, T. J.; Bremer, M.; Bertoldi, F.; Menten, K. M.; Lisenfeld, U.; Shepherd, D. S.; Mason, B.; Walter, F.; Pooley, G. G.; Frail, D. A.; Sari, R.; Kulkarni, S. R.; Berger, E.; Bloom, J. S.; Castro-Tirado, A. J.; Granot, J.

2000-10-01

The millimeter wavelength emission from GRB 991208 is the second brightest ever detected, yielding a unique data set. We present here well-sampled spectra and light curves over more than two decades in frequency for a 2 week period. This data set has allowed us for the first time to trace the evolution of the characteristic synchrotron self-absorption frequency νa, peak frequency νm, and the peak flux density Fm; we obtain νa~t-0.15+/-0.23, νm~t-1.7+/-0.7, and Fm~t-0.47+/-0.20. From the radio data we find that models of homogeneous or wind-generated ambient media with a spherically symmetric outflow can be ruled out. A model in which the relativistic outflow is collimated (a jet) can account for the observed evolution of the synchrotron parameters, the rapid decay at optical wavelengths, and the observed radio-to-optical spectral flux distributions that we present here, provided that the jet transition has not been fully completed in the first 2 weeks after the event. These observations provide additional evidence that rapidly decaying optical/X-ray afterglows are due to jets and that such transitions either develop very slowly or perhaps never reach the predicted asymptotic decay F(t)~t-p.

Binary Population and Spectral Synthesis Version 2.1: Construction, Observational Verification, and New Results

NASA Astrophysics Data System (ADS)

Eldridge, J. J.; Stanway, E. R.; Xiao, L.; McClelland, L. A. S.; Taylor, G.; Ng, M.; Greis, S. M. L.; Bray, J. C.

2017-11-01

The Binary Population and Spectral Synthesis suite of binary stellar evolution models and synthetic stellar populations provides a framework for the physically motivated analysis of both the integrated light from distant stellar populations and the detailed properties of those nearby. We present a new version 2.1 data release of these models, detailing the methodology by which Binary Population and Spectral Synthesis incorporates binary mass transfer and its effect on stellar evolution pathways, as well as the construction of simple stellar populations. We demonstrate key tests of the latest Binary Population and Spectral Synthesis model suite demonstrating its ability to reproduce the colours and derived properties of resolved stellar populations, including well-constrained eclipsing binaries. We consider observational constraints on the ratio of massive star types and the distribution of stellar remnant masses. We describe the identification of supernova progenitors in our models, and demonstrate a good agreement to the properties of observed progenitors. We also test our models against photometric and spectroscopic observations of unresolved stellar populations, both in the local and distant Universe, finding that binary models provide a self-consistent explanation for observed galaxy properties across a broad redshift range. Finally, we carefully describe the limitations of our models, and areas where we expect to see significant improvement in future versions.

Leaf wax biomarker reconstruction of Early Pleistocene hydrological variation during hominin evolution in West Turkana, Kenya

NASA Astrophysics Data System (ADS)

Lupien, R.; Russell, J. M.; Cohen, A. S.; Feibel, C. S.; Beck, C.; Castañeda, I. S.

2016-12-01

Climate change is thought to play a critical role in human evolution; however, this hypothesis is difficult to test due to a lack of long, high-quality paleoclimate records from key hominin fossil locales. To address this issue, we examine Plio-Pleistocene lake sediment drill cores from East Africa that were recovered by the Hominin Sites and Paleolakes Drilling Project, an international effort to study the environment in which our hominin ancestors evolved and dispersed. With new data we test various evolutionary hypotheses, such as the "variability selection" hypothesis, which posits that high-frequency environmental variations selected for generalist traits that allowed hominins to expand into variable environments. We analyzed organic geochemical signals of climate in lake cores from West Turkana, Kenya, which span 1.87-1.38 Ma and contain the first fossils from Homo erectus. In particular, we present a compound-specific hydrogen isotopic analysis of terrestrial plant waxes (δDwax) that records regional hydrology. The amount effect dominates water isotope fractionation in the tropics; therefore, these data are interpreted to reflect mean annual rainfall, which affects vegetation structure and thus, hominin habitats. The canonical view of East Africa is that climate became drier and increasingly felt high-latitude glacial-interglacial cycles during the Plio-Pleistocene. However, the drying trend seen in some records is not evident in Turkana δDwax, signifying instead a climate with a steady mean state. Spectral and moving variance analyses indicate paleohydrological variations related to both high-latitude glaciation (41 ky cycle) and local insolation-forced monsoons (21 ky cycle). An interval of particularly high-amplitude rainfall variation occurs at 1.7 Ma, which coincides with the intensification of the Walker Circulation. These results identify high- and low-latitude controls on East African paleohydrology during Homo erectus evolution. In particular, the

Spectral simplicity of apparent complexity. II. Exact complexities and complexity spectra

NASA Astrophysics Data System (ADS)

Riechers, Paul M.; Crutchfield, James P.

2018-03-01

The meromorphic functional calculus developed in Part I overcomes the nondiagonalizability of linear operators that arises often in the temporal evolution of complex systems and is generic to the metadynamics of predicting their behavior. Using the resulting spectral decomposition, we derive closed-form expressions for correlation functions, finite-length Shannon entropy-rate approximates, asymptotic entropy rate, excess entropy, transient information, transient and asymptotic state uncertainties, and synchronization information of stochastic processes generated by finite-state hidden Markov models. This introduces analytical tractability to investigating information processing in discrete-event stochastic processes, symbolic dynamics, and chaotic dynamical systems. Comparisons reveal mathematical similarities between complexity measures originally thought to capture distinct informational and computational properties. We also introduce a new kind of spectral analysis via coronal spectrograms and the frequency-dependent spectra of past-future mutual information. We analyze a number of examples to illustrate the methods, emphasizing processes with multivariate dependencies beyond pairwise correlation. This includes spectral decomposition calculations for one representative example in full detail.

A numerical spectral approach to solve the dislocation density transport equation

NASA Astrophysics Data System (ADS)

Djaka, K. S.; Taupin, V.; Berbenni, S.; Fressengeas, C.

2015-09-01

A numerical spectral approach is developed to solve in a fast, stable and accurate fashion, the quasi-linear hyperbolic transport equation governing the spatio-temporal evolution of the dislocation density tensor in the mechanics of dislocation fields. The approach relies on using the Fast Fourier Transform algorithm. Low-pass spectral filters are employed to control both the high frequency Gibbs oscillations inherent to the Fourier method and the fast-growing numerical instabilities resulting from the hyperbolic nature of the transport equation. The numerical scheme is validated by comparison with an exact solution in the 1D case corresponding to dislocation dipole annihilation. The expansion and annihilation of dislocation loops in 2D and 3D settings are also produced and compared with finite element approximations. The spectral solutions are shown to be stable, more accurate for low Courant numbers and much less computation time-consuming than the finite element technique based on an explicit Galerkin-least squares scheme.

Neutrino mass hierarchy and three-flavor spectral splits of supernova neutrinos

DOE Office of Scientific and Technical Information (OSTI.GOV)

Dasgupta, Basudeb; Mirizzi, Alessandro; Tomas, Ricard

2010-05-01

It was recently realized that three-flavor effects could peculiarly modify the development of spectral splits induced by collective oscillations, for supernova neutrinos emitted during the cooling phase of a protoneutron star. We systematically explore this case, explaining how the impact of these three-flavor effects depends on the ordering of the neutrino masses. In inverted mass hierarchy, the solar mass splitting gives rise to instabilities in regions of the (anti)neutrino energy spectra that were otherwise stable under the leading two-flavor evolution governed by the atmospheric mass splitting and by the 1-3 mixing angle. As a consequence, the high-energy spectral splits foundmore » in the electron (anti)neutrino spectra disappear, and are transferred to other flavors. Imperfect adiabaticity leads to smearing of spectral swap features. In normal mass hierarchy, the three-flavor and the two-flavor instabilities act in the same region of the neutrino energy spectrum, leading to only minor departures from the two-flavor treatment.« less

Observational aspects of outbursting black hole sources: Evolution of spectro-temporal features and X-ray variability

NASA Astrophysics Data System (ADS)

Sreehari, H.; Nandi, Anuj; Radhika, D.; Iyer, Nirmal; Mandal, Samir

2018-02-01

We report on our attempt to understand the outbursting profile of Galactic Black Hole sources, keeping in mind the evolution of temporal and spectral features during the outburst. We present results of evolution of quasi-periodic oscillations, spectral states and possible connection with jet ejections during the outburst phase. Further, we attempt to connect the observed X-ray variabilities (i.e., `class'/`structured' variabilities, similar to GRS 1915+105) with spectral states of black hole sources. Towards these studies, we consider three black hole sources that have undergone single (XTE J1859+226), a few (IGR J17091-3624) and many (GX 339-4) outbursts since the start of RXTE era. Finally, we model the broadband energy spectra (3-150 keV) of different spectral states using RXTE and NuSTAR observations. Results are discussed in the context of two-component advective flow model, while constraining the mass of the three black hole sources.

Floquet analysis of Kuznetsov-Ma breathers: A path towards spectral stability of rogue waves.

PubMed

Cuevas-Maraver, J; Kevrekidis, P G; Frantzeskakis, D J; Karachalios, N I; Haragus, M; James, G

2017-07-01

In the present work, we aim at taking a step towards the spectral stability analysis of Peregrine solitons, i.e., wave structures that are used to emulate extreme wave events. Given the space-time localized nature of Peregrine solitons, this is a priori a nontrivial task. Our main tool in this effort will be the study of the spectral stability of the periodic generalization of the Peregrine soliton in the evolution variable, namely the Kuznetsov-Ma breather. Given the periodic structure of the latter, we compute the corresponding Floquet multipliers, and examine them in the limit where the period of the orbit tends to infinity. This way, we extrapolate towards the stability of the limiting structure, namely the Peregrine soliton. We find that multiple unstable modes of the background are enhanced, yet no additional unstable eigenmodes arise as the Peregrine limit is approached. We explore the instability evolution also in direct numerical simulations.

Purely Dry Mergers do not Explain the Observed Evolution of Massive Early-type Galaxies since z ~ 1

NASA Astrophysics Data System (ADS)

Sonnenfeld, Alessandro; Nipoti, Carlo; Treu, Tommaso

2014-05-01

Several studies have suggested that the observed size evolution of massive early-type galaxies (ETGs) can be explained as a combination of dry mergers and progenitor bias, at least since z ~ 1. In this paper we carry out a new test of the dry-merger scenario based on recent lensing measurements of the evolution of the mass density profile of ETGs. We construct a theoretical model for the joint evolution of the size and mass density profile slope γ' driven by dry mergers occurring at rates given by cosmological simulations. Such dry-merger model predicts a strong decrease of γ' with cosmic time, inconsistent with the almost constant γ' inferred from observations in the redshift range 0 < z < 1. We then show with a simple toy model that a modest amount of cold gas in the mergers—consistent with the upper limits on recent star formation in ETGs—is sufficient to reconcile the model with measurements of γ'. By fitting for the amount of gas accreted during mergers, we find that models with dissipation are consistent with observations of the evolution in both size and density slope, if ~4% of the total final stellar mass arises from the gas accreted since z ~ 1. Purely dry merger models are ruled out at >99% CL. We thus suggest a scenario where the outer regions of massive ETGs grow by accretion of stars and dark matter, while small amounts of dissipation and nuclear star formation conspire to keep the mass density profile constant and approximately isothermal.

THE SDSS-III APOGEE SPECTRAL LINE LIST FOR H-BAND SPECTROSCOPY

DOE Office of Scientific and Technical Information (OSTI.GOV)

Shetrone, M.; Bizyaev, D.; Chojnowski, D.

We present the H-band spectral line lists adopted by the Apache Point Observatory Galactic Evolution Experiment (APOGEE). The APOGEE line lists comprise astrophysical, theoretical, and laboratory sources from the literature, as well as newly evaluated astrophysical oscillator strengths and damping parameters. We discuss the construction of the APOGEE line list, which is one of the critical inputs for the APOGEE Stellar Parameters and Chemical Abundances Pipeline, and present three different versions that have been used at various stages of the project. The methodology for the newly calculated astrophysical line lists is reviewed. The largest of these three line lists containsmore » 134,457 molecular and atomic transitions. In addition to the format adopted to store the data, the line lists are available in MOOG, Synspec, and Turbospectrum formats. The limitations of the line lists along with guidance for its use on different spectral types are discussed. We also present a list of H-band spectral features that are either poorly represented or completely missing in our line list. This list is based on the average of a large number of spectral fit residuals for APOGEE observations spanning a wide range of stellar parameters.« less

Long-term preservation of early formed mantle heterogeneity by mobile lid convection: Importance of grainsize evolution

NASA Astrophysics Data System (ADS)

Foley, Bradford J.; Rizo, Hanika

2017-10-01

The style of tectonics on the Hadean and Archean Earth, particularly whether plate tectonics was in operation or not, is debated. One important, albeit indirect, constraint on early Earth tectonics comes from observations of early-formed geochemical heterogeneities: 142Nd and 182W anomalies recorded in Hadean to Phanerozoic rocks from different localities indicate that chemically heterogeneous reservoirs, formed during the first ∼500 Myrs of Earth's history, survived their remixing into the mantle for over 1 Gyrs. Such a long mixing time is difficult to explain because hotter mantle temperatures, expected for the early Earth, act to lower mantle viscosity and increase convective vigor. Previous studies found that mobile lid convection typically erases heterogeneity within ∼100 Myrs under such conditions, leading to the hypothesis that stagnant lid convection on the early Earth was responsible for the observed long mixing times. However, using two-dimensional Cartesian convection models that include grainsize evolution, we find that mobile lid convection can preserve heterogeneity at high mantle temperature conditions for much longer than previously thought, because higher mantle temperatures lead to larger grainsizes in the lithosphere. These larger grainsizes result in stronger plate boundaries that act to slow down surface and interior convective motions, in competition with the direct effect temperature has on mantle viscosity. Our models indicate that mobile lid convection can preserve heterogeneity for ≈0.4-1 Gyrs at early Earth mantle temperatures when the initial heterogeneity has the same viscosity as the background mantle, and ≈1-4 Gyrs when the heterogeneity is ten times more viscous than the background mantle. Thus, stagnant lid convection is not required to explain long-term survival of early formed geochemical heterogeneities, though these heterogeneities having an elevated viscosity compared to the surrounding mantle may be essential for their

The Importance of Lake Overflow Floods for Early Martian Landscape Evolution: Insights From Licus Vallis

NASA Technical Reports Server (NTRS)

Goudge, T. A.; Fassett, C. I.

2017-01-01

Open-basin lake outlet valleys are incised when water breaches the basin-confining topography and overflows. Outlet valleys record this flooding event and provide insight into how the lake and surrounding terrain evolved over time. Here we present a study of the paleolake outlet Licus Vallis, a >350 km long, >2 km wide, >100 m deep valley that heads at the outlet breach of an approx.30 km diameter impact crater. Multiple geomorphic features of this valley system suggest it records a more complex evolution than formation from a single lake overflow flood. This provides unique insight into the paleohydrology of lakes on early Mars, as we can make inferences beyond the most recent phase of activity..

Evolution of Lamb Vector as a Vortex Breaking into Turbulence.

NASA Astrophysics Data System (ADS)

Wu, J. Z.; Lu, X. Y.

1996-11-01

In an incompressible flow, either laminar or turbulent, the Lamb vector is solely responsible to nonlinear interactions. While its longitudinal part is balanced by stagnation enthalpy, its transverse part is the unique source (as an external forcing in spectral space) that causes the flow to evolve. Moreover, in Reynolds-averaged flows the turbulent force can be derived exclusively from the Lamb vector instead of the full Reynolds stress tensor. Therefore, studying the evolution of the Lamb vector itself (both longitudinal and transverse parts) is of great interest. We have numerically examined this problem, taking the nonlinear distabilization of a viscous vortex as an example. In the later stage of this evolution we introduced a forcing to keep a statistically steady state, and observed the Lamb vector behavior in the resulting fine turbulence. The result is presented in both physical and spectral spaces.

Spectral analysis of point-vortex dynamics: first application to vortex polygons in a circular domain

NASA Astrophysics Data System (ADS)

Speetjens, M. F. M.; Meleshko, V. V.; van Heijst, G. J. F.

2014-06-01

The present study addresses the classical problem of the dynamics and stability of a cluster of N-point vortices of equal strength arranged in a polygonal configuration (‘N-vortex polygons’). In unbounded domains, such N-vortex polygons are unconditionally stable for N\\leqslant 7. Confinement in a circular domain tightens the stability conditions to N\\leqslant 6 and a maximum polygon size relative to the domain radius. This work expands on existing studies on stability and integrability by a first giving an exploratory spectral analysis of the dynamics of N vortex polygons in circular domains. Key to this is that the spectral signature of the time evolution of vortex positions reflects their qualitative behaviour. Expressing vortex motion by a generic evolution operator (the so-called Koopman operator) provides a rigorous framework for such spectral analyses. This paves the way to further differentiation and classification of point-vortex behaviour beyond stability and integrability. The concept of Koopman-based spectral analysis is demonstrated for N-vortex polygons. This reveals that conditional stability can be seen as a local form of integrability and confirms an important generic link between spectrum and dynamics: discrete spectra imply regular (quasi-periodic) motion; continuous (sub-)spectra imply chaotic motion. Moreover, this exposes rich nonlinear dynamics as intermittency between regular and chaotic motion and quasi-coherent structures formed by chaotic vortices. Dedicated to the memory of Slava Meleshko, a dear friend and inspiring colleague.

Diagnosis of extent of early gastric cancer using flexible spectral imaging color enhancement

PubMed Central

Osawa, Hiroyuki; Yamamoto, Hironori; Miura, Yoshimasa; Yoshizawa, Mitsuyo; Sunada, Keijiro; Satoh, Kiichi; Sugano, Kentaro

2012-01-01

The demarcation line between the cancerous lesion and the surrounding area could be easily recognized with flexible spectral imaging color enhancement (FICE) system compared with conventional white light images. The characteristic finding of depressed-type early gastric cancer (EGC) in most cases was revealed as reddish lesions distinct from the surrounding yellowish non-cancerous area without magnification. Conventional endoscopic images provide little information regarding depressed lesions located in the tangential line, but FICE produces higher color contrast of such cancers. Histological findings in depressed area with reddish color changes show a high density of glandular structure and an apparently irregular microvessel in intervening parts between crypts, resulting in the higher color contrast of FICE image between cancer and surrounding area. Some depressed cancers are shown as whitish lesion by conventional endoscopy. FICE also can produce higher color contrast between whitish cancerous lesions and surrounding atrophic mucosa. For nearly flat cancer, FICE can produce an irregular structural pattern of cancer distinct from that of the surrounding mucosa, leading to a clear demarcation. Most elevated-type EGCs are detected easily as yellowish lesions with clearly contrasting demarcation. In some cases, a partially reddish change is accompanied on the tumor surface similar to depressed type cancer. In addition, the FICE system is quite useful for the detection of minute gastric cancer, even without magnification. These new contrasting images with the FICE system may have the potential to increase the rate of detection of gastric cancers and screen for them more effectively as well as to determine the extent of EGC. PMID:22912909

Structure and Evolution of Kuiper Belt Objects and Dwarf Planets

NASA Astrophysics Data System (ADS)

McKinnon, W. B.; Prialnik, D.; Stern, S. A.; Coradini, A.

Kuiper belt objects (KBOs) accreted from a mélange of volatile ices, carbonaceous matter, and rock of mixed interstellar and solar nebular provenance. The transneptunian region, where this accretion took place, was likely more radially compact than today. This and the influence of gas drag during the solar nebula epoch argue for more rapid KBO accretion than usually considered. Early evolution of KBOs was largely the result of heating due to radioactive decay, the most important potential source being 26Al, whereas long-term evolution of large bodies is controlled by the decay of U, Th, and 40K. Several studies are reviewed dealing with the evolution of KBO models, calculated by means of one-dimensional numerical codes that solve the heat and mass balance equations. It is shown that, depending on parameters (principally rock content and porous conductivity), KBO interiors may have reached relatively high temperatures. The models suggest that KBOs likely lost ices of very volatile species during early evolution, whereas ices of less-volatile species should be retained in cold, less-altered subsurface layers. Initially amorphous ice may have crystallized in KBO interiors, releasing volatiles trapped in the amorphous ice, and some objects may have lost part of these volatiles as well. Generally, the outer layers are far less affected by internal evolution than the inner part, which in the absence of other effects (such as collisions) predicts a stratified composition and altered porosity distribution. Kuiper belt objects are thus unlikely to be "the most pristine objects in the solar system," but they do contain key information as to how the early solar system accreted and dynamically evolved. For large (dwarf planet) KBOs, long-term radiogenic heating alone may lead to differentiated structures -- rock cores, ice mantles, volatile-ice-rich "crusts," and even oceans. Persistence of oceans and (potential) volcanism to the present day depends strongly on body size and

The hydrologic response of Mars to the onset of a colder climate and to the thermal evolution of its early crust

NASA Technical Reports Server (NTRS)

Clifford, S. M.

1993-01-01

Morphologic similarities between the Martian valley networks and terrestrial runoff channel have been cited as evidence that the early Martian climate was originally more Earth-like, with temperatures and pressures high enough to permit the precipitation of H2O as snow or rain. Although unambiguous evidence that Mars once possessed a warmer, wetter climate is lacking, a study of the transition from such conditions to the present climate can benefit our understanding of both the early development of the cryosphere and the various ways in which the current subsurface hydrology of Mars is likely to differ from that of the Earth. Viewed from this perspective, the early hydrologic evolution of Mars is essentially identical to considering the hydrologic response of the Earth to the onset of a global subfreezing climate.

A complete skull of an early cretaceous sauropod and the evolution of advanced titanosaurians.

PubMed

Zaher, Hussam; Pol, Diego; Carvalho, Alberto B; Nascimento, Paulo M; Riccomini, Claudio; Larson, Peter; Juarez-Valieri, Rubén; Pires-Domingues, Ricardo; da Silva, Nelson Jorge; Campos, Diógenes de Almeida

2011-02-07

Advanced titanosaurian sauropods, such as nemegtosaurids and saltasaurids, were diverse and one of the most important groups of herbivores in the terrestrial biotas of the Late Cretaceous. However, little is known about their rise and diversification prior to the Late Cretaceous. Furthermore, the evolution of their highly-modified skull anatomy has been largely hindered by the scarcity of well-preserved cranial remains. A new sauropod dinosaur from the Early Cretaceous of Brazil represents the earliest advanced titanosaurian known to date, demonstrating that the initial diversification of advanced titanosaurians was well under way at least 30 million years before their known radiation in the latest Cretaceous. The new taxon also preserves the most complete skull among titanosaurians, further revealing that their low and elongated diplodocid-like skull morphology appeared much earlier than previously thought.

A Teaching Module about Stellar Structure and Evolution

ERIC Educational Resources Information Center

Colantonio, Arturo; Galano, Silvia; Leccia, Silvio; Puddu, Emanuella; Testa, Italo

2017-01-01

In this paper, we present a teaching module about stellar structure, functioning and evolution. Drawing from literature in astronomy education, we designed the activities around three key ideas: spectral analysis, mechanical and thermal equilibrium, energy and nuclear reactions. The module is divided into four phases, in which the key ideas for…

Early descriptions of acromegaly and gigantism and their historical evolution as clinical entities.

PubMed

Mammis, Antonios; Eloy, Jean Anderson; Liu, James K

2010-10-01

Giants have been a subject of fascination throughout history. Whereas descriptions of giants have existed in the lay literature for millennia, the first attempt at a medical description was published by Johannes Wier in 1567. However, it was Pierre Marie, in 1886, who established the term "acromegaly" for the first time and established a distinct clinical diagnosis with clear clinical descriptions in 2 patients with the characteristic presentation. Multiple autopsy findings revealed a consistent correlation between acromegaly and pituitary enlargement. In 1909, Harvey Cushing postulated a “hormone of growth" as the underlying pathophysiological trigger involved in pituitary hypersecretion in patients with acromegaly. This theory was supported by his observations of clinical remission in patients with acromegaly in whom he had performed hypophysectomy. In this paper, the authors present some of the early accounts of acromegaly and gigantism, and describe its historical evolution as a medical and surgical entity.

Direct numerical simulations of a reacting turbulent mixing layer by a pseudospectral-spectral element method

NASA Technical Reports Server (NTRS)

Mcmurtry, Patrick A.; Givi, Peyman

1992-01-01

An account is given of the implementation of the spectral-element technique for simulating a chemically reacting, spatially developing turbulent mixing layer. Attention is given to experimental and numerical studies that have investigated the development, evolution, and mixing characteristics of shear flows. A mathematical formulation is presented of the physical configuration of the spatially developing reacting mixing layer, in conjunction with a detailed representation of the spectral-element method's application to the numerical simulation of mixing layers. Results from 2D and 3D calculations of chemically reacting mixing layers are given.

Disentangling The Evolution Of S0 Galaxies Using Spectral Data Cubes

NASA Astrophysics Data System (ADS)

Johnston, Evelyn; Tabor, Martha; Merrifield, Michael; Aragón-Salamanca, Alfonso; Häussler, Boris; Bamford, Steven; Cappellari, Michele

2016-09-01

While it is fairly well accepted that S0 galaxies evolve from spiral disk systems, the mechanism by which they do so is not well determined. A number of processes, ranging from simply running out of gas to environmentally-driven gas removal, interactions and mergers, have been proposed, and the reality is probably that there are multiple routes between these two states.One key way to explore how the disk and bulge components in S0 galaxies reached their current states is provided by studies of their spectra: stellar population analysis provides information on the sequence in which these components formed, while the kinematic information in these data holds clues to the degree of violence in the transformation process.With the availability of large integral-field unit (IFU) spectral surveys of nearby galaxies, there is now the potential to extract this information in a systematic way, to address the questions of which evolutionary channels S0 have galaxies evolved down, and whether these channels depend on other properties of the galaxy such as its mass or environment. Accordingly, we have been developing new tools to extract optimally the information contained within such data, to isolate the spectral properties of these galaxies' disks and bulges.Results to date are already proving interesting, with bulges of S0s in clusters systematically younger than the disks that surround them, implying a last chaotic burst of star formation near their centres in a reasonably violent transition, while those in less dense environments seem to show older bulges, consistent with star formation in a spiral galaxy simply ceasing.

Dry minor mergers and size evolution of high-z compact massive early-type galaxies

NASA Astrophysics Data System (ADS)

Oogi, Taira; Habe, Asao

2012-09-01

Recent observations show evidence that high-z (z ~ 2 - 3) early-type galaxies (ETGs) are quite compact than that with comparable mass at z ~ 0. Dry merger scenario is one of the most probable one that can explain such size evolution. However, previous studies based on this scenario do not succeed to explain both properties of high-z compact massive ETGs and local ETGs, consistently. We investigate effects of sequential, multiple dry minor (stellar mass ratio M2/M1<1/4) mergers on the size evolution of compact massive ETGs. We perform N-body simulations of the sequential minor mergers with parabolic and head-on orbits, including a dark matter component and a stellar component. We show that the sequential minor mergers of compact satellite galaxies are the most efficient in the size growth and in decrease of the velocity dispersion of the compact massive ETGs. The change of stellar size and density of the merger remnant is consistent with the recent observations. Furthermore, we construct the merger histories of candidates of high-z compact massive ETGs using the Millennium Simulation Database, and estimate the size growth of the galaxies by dry minor mergers. We can reproduce the mean size growth factor between z = 2 and z = 0, assuming the most efficient size growth obtained in the case of the sequential minor mergers in our simulations.

Kernel spectral clustering with memory effect

NASA Astrophysics Data System (ADS)

Langone, Rocco; Alzate, Carlos; Suykens, Johan A. K.

2013-05-01

Evolving graphs describe many natural phenomena changing over time, such as social relationships, trade markets, metabolic networks etc. In this framework, performing community detection and analyzing the cluster evolution represents a critical task. Here we propose a new model for this purpose, where the smoothness of the clustering results over time can be considered as a valid prior knowledge. It is based on a constrained optimization formulation typical of Least Squares Support Vector Machines (LS-SVM), where the objective function is designed to explicitly incorporate temporal smoothness. The latter allows the model to cluster the current data well and to be consistent with the recent history. We also propose new model selection criteria in order to carefully choose the hyper-parameters of our model, which is a crucial issue to achieve good performances. We successfully test the model on four toy problems and on a real world network. We also compare our model with Evolutionary Spectral Clustering, which is a state-of-the-art algorithm for community detection of evolving networks, illustrating that the kernel spectral clustering with memory effect can achieve better or equal performances.

Spectral reflectance properties of minerals exposed to simulated Mars surface conditions

NASA Astrophysics Data System (ADS)

Cloutis, E. A.; Craig, M. A.; Kruzelecky, R. V.; Jamroz, W. R.; Scott, A.; Hawthorne, F. C.; Mertzman, S. A.

2008-05-01

A number of mineral species were exposed to martian surface conditions of atmospheric pressure and composition, temperature, and UV light regime, and their evolution was monitored using reflectance spectroscopy. The stabilities for different groups varied widely. Phyllosilicate spectra all showed measurable losses of interlayer H 2O, with some structural groups showing more rapid H 2O loss than others. Loss of OH from the phyllosilicates is not always accompanied by a change in metal-OH overtone absorption bands. OH-bearing sulfates, such as jarosite and alunite, show no measurable change in spectral properties, suggesting that they should be spectrally detectable on Mars on the basis of diagnostic absorption bands in the 0.4-2.5 μm region. Fe 3+- and H 2O-bearing sulfates all showed changes in the appearance and/or reduction in depths of hydroxo-bridged Fe 3+ absorption bands, particularly at 0.43 μm. The spectral changes were often accompanied by visible color changes, suggesting that subsurface sulfates exposed to the martian surface environment may undergo measurable changes in reflectance spectra and color over short periods of time (days to weeks). Organic-bearing geological materials showed no measurable change in C sbnd H related absorption bands, while carbonates and hydroxides also showed no systematic changes in spectral properties. The addition of ultraviolet irradiation did not seem to affect mineral stability or rate of spectral change, with one exception (hexahydrite). In some cases, spectral changes could be related to the formation of specific new phases. The data also suggest that hydrated minerals detected on Mars to date retain their diagnostic spectral properties that allow their unique identification.

Early Evolution of Comet 67P Studied with the RPC-LAP onboard Rosetta

NASA Astrophysics Data System (ADS)

Miloch, W. J.; Yang, L.; Paulsson, J. J.; Wedlund, C. S.; Odelstad, E.; Edberg, N. J. T.; Koenders, C.; Eriksson, A.

2016-12-01

In-situ measurements within the Rosetta mission allow for studies of the cometary environment at different stages of cometary evolution. The Rosetta Plasma Consortium (RPC) is a set of five instruments on board the spacecraft that specialise in the measurements of plasma environment of comet 67P. One of the instruments is RPC-LAP, which consists of two Langmuir Probes and can measure the density, temperature, and flow speed of the plasma in the vicinity of the comet. At the early stage of the Rosetta mission, when the spacecraft is far from the nucleus of comet 67P, the ion part of the current-voltage characteristics of RPC-LAP1 is dominated by the photoemission current, which surpasses the currents from the dilute solar wind plasma. As Rosetta starts orbiting around the nucleus in September 2014, LAP1 picks up signatures of local plasma density enhancements corresponding to variations of water-group ions observed in the vicinity of the comet. With the help of current-voltage characteristics and the spacecraft potential, we identify and characterise in space and time the entering of this coma-dominated, high-density plasma region. This high-density region is observed at the northern hemisphere of the comet during early activity. The transition manifests as a steep gradient in the density with respect to the distance to the comet nucleus. We discuss these RPC-LAP results together with the corresponding measurements by other instruments to provide a comprehensive picture of the transition. We show that the early cometary plasma can be seen as composed of two distinct regions: an outer region characterised by solar wind plasma and small quantities of pickup ions, and an inner region with enhanced plasma densities.

Radial evolution of power spectra of interplanetary Alfvenic turbulence

NASA Technical Reports Server (NTRS)

Bavassano, B.; Dobrowolny, M.; Mariani, F.; Ness, N. F.

1981-01-01

The radial evolution of the power spectra of the MHD turbulence within the trailing edge of high speed streams in the solar wind was investigated with the magnetic field data of Helios 1 and 2 for heliocentric distance between 0.3 and 0.9 AU. In the analyzed frequency range (.00028 Hz to .0083 Hz) the computed spectra have, near the Earth, values of the spectral index close to that predicted for an incompressible hydromagnetic turbulence in a stationary state. Approaching the Sun the spectral slope remains unchanged for frequencies f or approximately .00 Hz, whereas at lower frequencies, a clear evolution toward a less steep fall off with frequency is found. The radial gradient of the power in Alfvenic fluctuations depends on frequency and it increases upon increasing frequency. For frequencies f or approximately .00 Hz, however, the radial gradient remains approximately the same. Possible theoretical implications of the observational features are discussed.

New Views on the Early Evolution of Oxygen in the Galaxy

NASA Astrophysics Data System (ADS)

Rebolo, R.; Israelian, G.; García López, R. J.

We have performed a detailed oxygen abundance analysis of 23 metal-poor (-3.0 < [Fe/H] < -0.3) unevolved halo stars and one giant through the OH bands in the near UV, using high-resolution echelle spectra. Oxygen is found to be overabundant with respect to iron in these stars, with the [O/Fe] ratio increasing from 0.6 to 1 between [Fe/H] = -1.5 and -3.0. The behavior of the oxygen overabundance with respect to [Fe/H] is similar to that seen in previous works based on the OI IR triplet data (Abia & Rebolo 1989; Tomkin et al. 1992; Cavallo, Pilachowski, & Rebolo 1997). Contrary to the previously accepted picture, our oxygen abundances, derived from low-excitation OH lines, agree well with those derived from high-excitation lines of the triplet. For nine stars in common with Tomkin et al. we obtain a mean difference of 0.00 plus or minus 0.11dex with respect to the abundances determined from the triplet using the same stellar parameters and model photospheres. Our new results show a smooth extension of the Edvardsson et al.'s (1993) [O/Fe] versus metallicity curve to much lower abundances. The oxygen abundances of unevolved stars when compared with values in the literature for giants of similar metallicity imply that the latter may have suffered a process of oxygen depletion. It appears that unevolved metal-poor stars are better tracers of the early chemical evolution of the Galaxy. The extrapolation of our results to very low metallicities indicates that the ratio of oxygen to iron emerging from the first Type II SNe in the early Galaxy was indeed close to unity. The higher [O/Fe] ratios we find in dwarfs has an impact on the age determination of globular clusters, and suggest that current age estimates have to be reduced by about 1-2 Gyr.

Paleomagnetic and Geochronologic Data from Central Asia: Inferences for Early Paleozoic Tectonic Evolution and Timing of Worldwide Glacial Events

NASA Astrophysics Data System (ADS)

Gregory, L. C.; Meert, J. G.; Levashova, N.; Grice, W. C.; Gibsher, A.; Rybanin, A.

2007-12-01

The Neoproterozoic to early Paleozoic Ural-Mongol belt that runs through Central Asia is crucial for determining the enigmatic amalgamation of microcontinents that make up the Eurasian subcontinent. Two unique models have been proposed for the evolution of Ural-Mongol belt. One involves a complex assemblage of cratonic blocks that have collided and rifted apart during diachronous opening and closing of Neoproterozoic to Devonian aged ocean basins. The opposing model of Sengor and Natal"in proposes a long-standing volcanic arc system that connected Central Asian blocks with the Baltica continent. The Aktau-Mointy and Dzabkhan microcontinents in Kazakhstan and Central Mongolia make up the central section of the Ural-Mongol belt, and both contain glacial sequences characteristic of the hypothesized snowball earth event. These worldwide glaciations are currently under considerable debate, and paleomagnetic data from these microcontients are a useful contribution to the snowball controversy. We have sampled volcanic and sedimentary sequences in Central Mongolia, Kazakhstan and Kyrgyzstan for paleomagnetic and geochronologic study. U-Pb data, 13C curves and abundant fossil records place age constraints on sequences that contain glacial deposits of the hypothesized snowball earth events. Carbonates in the Zavkhan Basin in Mongolia are likely remagnetized, but fossil evidence within the sequence suggests a readjusted age control on two glacial events that were previously labeled as Sturtian and Marinoan. U-Pb ages from both Kazakhstan and Mongolian volcanic sequences imply a similar evolution history of the areas as part of the Ural-Mongol fold belt, and these ages paired with paleomagnetic and 13C records have important tectonic implications. We will present these data in order to place better constraints on the Precambrian to early Paleozoic tectonic evolution of Central Asia and the timing of glacial events recorded in the area.

Early prognostic value of an Algorithm based on spectral Variables of Ventricular fibrillAtion from the EKG of patients with suddEn cardiac death: A multicentre observational study (AWAKE).

PubMed

Palacios-Rubio, Julián; Marina-Breysse, Manuel; Quintanilla, Jorge G; Gil-Perdomo, José Miguel; Juárez-Fernández, Miriam; Garcia-Gonzalez, Inés; Rial-Bastón, Verónica; Corcobado, María Carmen; Espinosa, María Carmen; Ruiz, Francisco; Gómez-Mascaraque Pérez, Francisco; Bringas-Bollada, María; Lillo-Castellano, José María; Pérez-Castellano, Nicasio; Martínez-Sellés, Manuel; López de Sá, Esteban; Martín-Benítez, Juan Carlos; Perez-Villacastín, Julián; Filgueiras-Rama, David

2018-06-06

Ventricular fibrillation (VF)-related sudden cardiac death (SCD) is a leading cause of mortality and morbidity. Current biological and imaging parameters show significant limitations on predicting cerebral performance at hospital admission. The AWAKE study (NCT03248557) is a multicentre observational study to validate a model based on spectral ECG analysis to early predict cerebral performance and survival in resuscitated comatose survivors. Data from VF ECG tracings of patients resuscitated from SCD will be collected using an electronic Case Report Form. Patients can be either comatose (Glasgow Coma Scale - GCS - ≤8) survivors undergoing temperature control after return of spontaneous circulation (RoSC), or those who regain consciousness (GCS=15) after RoSC; all admitted to Intensive Cardiac Care Units in 4 major university hospitals. VF tracings prior to the first direct current shock will be digitized and analyzed to derive spectral data and feed a predictive model to estimate favorable neurological performance (FNP). The results of the model will be compared to the actual prognosis. The primary clinical outcome is FNP during hospitalization. Patients will be categorized into 4 subsets of neurological prognosis according to the risk score obtained from the predictive model. The secondary clinical outcomes are survival to hospital discharge, and FNP and survival after 6 months of follow-up. The model-derived categorisation will be also compared with clinical variables to assess model sensitivity, specificity, and accuracy. A model based on spectral analysis of VF tracings is a promising tool to obtain early prognostic data after SCD. Copyright © 2018 Instituto Nacional de Cardiología Ignacio Chávez. Publicado por Masson Doyma México S.A. All rights reserved.

Spectral shifts of mammalian ultraviolet-sensitive pigments (short wavelength-sensitive opsin 1) are associated with eye length and photic niche evolution.

PubMed

Emerling, Christopher A; Huynh, Hieu T; Nguyen, Minh A; Meredith, Robert W; Springer, Mark S

2015-11-22

Retinal opsin photopigments initiate mammalian vision when stimulated by light. Most mammals possess a short wavelength-sensitive opsin 1 (SWS1) pigment that is primarily sensitive to either ultraviolet or violet light, leading to variation in colour perception across species. Despite knowledge of both ultraviolet- and violet-sensitive SWS1 classes in mammals for 25 years, the adaptive significance of this variation has not been subjected to hypothesis testing, resulting in minimal understanding of the basis for mammalian SWS1 spectral tuning evolution. Here, we gathered data on SWS1 for 403 mammal species, including novel SWS1 sequences for 97 species. Ancestral sequence reconstructions suggest that the most recent common ancestor of Theria possessed an ultraviolet SWS1 pigment, and that violet-sensitive pigments evolved at least 12 times in mammalian history. We also observed that ultraviolet pigments, previously considered to be a rarity, are common in mammals. We then used phylogenetic comparative methods to test the hypotheses that the evolution of violet-sensitive SWS1 is associated with increased light exposure, extended longevity and longer eye length. We discovered that diurnal mammals and species with longer eyes are more likely to have violet-sensitive pigments and less likely to possess UV-sensitive pigments. We hypothesize that (i) as mammals evolved larger body sizes, they evolved longer eyes, which limited transmittance of ultraviolet light to the retina due to an increase in Rayleigh scattering, and (ii) as mammals began to invade diurnal temporal niches, they evolved lenses with low UV transmittance to reduce chromatic aberration and/or photo-oxidative damage. © 2015 The Author(s).

Early evolution of large micro-organisms with cytological complexity revealed by microanalyses of 3.4 Ga organic-walled microfossils.

PubMed

Sugitani, K; Mimura, K; Takeuchi, M; Lepot, K; Ito, S; Javaux, E J

2015-11-01

The Strelley Pool Formation (SPF) is widely distributed in the East Pilbara Terrane (EPT) of the Pilbara Craton, Western Australia, and represents a Paleoarchean shallow-water to subaerial environment. It was deposited ~3.4 billion years ago and displays well-documented carbonate stromatolites. Diverse putative microfossils (SPF microfossils) were recently reported from several localities in the East Strelley, Panorama, Warralong, and Goldsworthy greenstone belts. Thus, the SPF provides unparalleled opportunities to gain insights into a shallow-water to subaerial ecosystem on the early Earth. Our new micro- to nanoscale ultrastructural and microchemical studies of the SPF microfossils show that large (20-70 μm) lenticular organic-walled flanged microfossils retain their structural integrity, morphology, and chain-like arrangements after acid (HF-HCl) extraction (palynology). Scanning and transmitted electron microscopy of extracted microfossils revealed that the central lenticular body is either alveolar or hollow, and the wall is continuous with the surrounding smooth to reticulated discoidal flange. These features demonstrate the evolution of large micro-organisms able to form an acid-resistant recalcitrant envelope or cell wall with complex morphology and to form colonial chains in the Paleoarchean era. This study provides evidence of the evolution of very early and remarkable biological innovations, well before the presumed late emergence of complex cells. © 2015 John Wiley & Sons Ltd.

The Spectral Signatures Of BH Versus NS Sources

NASA Astrophysics Data System (ADS)

Seifina, E.; Titarchuk, L.

2011-09-01

We present a comparative analysis of spectral properties of Black Hole (BH) and Neutron Star (NS) X-ray binaries during transition events observed with BeppoSAX and RXTE satellites. In particular, we investigated the behavior of Comptonized component of X-ray spectra when object evolves from the low to high spectral states. The basic models to fit X-ray spectra of these objects are upscattering models (so called BMC and COMPTB models) which are the first principal models. These models taking into account both dynamical and thermal Comptonization and allow to study separate contributions of thermal component and Comptonization component (bulk and thermal effect of Comptonization processes). Specifically, we tested quite a few observations of BHs (GRS 1915+105 and SS 433) and NSs (4U 1728-34 and GX 3+1) applying BMC and COMPTB models. In this way it was found a crucial difference in behavior of photon index vs mass accretion rate (mdot) for BHs and NSs. Namely, we revealed the stability of the photon index around typical value of Gamma=2 versus mdot (or electron temperature) during spectral evolution of NS sources. This stability effect was previously suggested for a number of other neutron binaries (see Farinelli and Titarchuk, 2011). This intrinsic property of NS is fundamentally different from that in BH binary sources for which the index demonstrates monotonic growth with mass accretion rate followed by its saturation at high values of mdot. These index-mass accretion rate behavior during X-ray spectral transition events can be considered as signatures, which allow to differ NS from BH.

Evolution of the Solar Activity Over Time and Effects on Planetary Atmospheres. II. κ1 Ceti, an Analog of the Sun when Life Arose on Earth

NASA Astrophysics Data System (ADS)

Ribas, I.; Porto de Mello, G. F.; Ferreira, L. D.; Hébrard, E.; Selsis, F.; Catalán, S.; Garcés, A.; do Nascimento, J. D., Jr.; de Medeiros, J. R.

2010-05-01

The early evolution of Earth's atmosphere and the origin of life took place at a time when physical conditions at the Earth were radically different from its present state. The radiative input from the Sun was much enhanced in the high-energy spectral domain, and in order to model early planetary atmospheres in detail, a knowledge of the solar radiative input is needed. We present an investigation of the atmospheric parameters, state of evolution, and high-energy fluxes of the nearby star κ1 Cet, previously thought to have properties resembling those of the early Sun. Atmospheric parameters were derived from the excitation/ionization equilibrium of Fe I and Fe II, profile fitting of Hα, and the spectral energy distribution. The UV irradiance was derived from Far-Ultraviolet Spectroscopic Explorer and Hubble Space Telescope data, and the absolute chromospheric flux from the Hα line core. From careful spectral analysis and the comparison of different methods, we propose for κ1 Cet the following atmospheric parameters: T eff = 5665 ± 30 K (Hα profile and energy distribution), log g = 4.49 ± 0.05 dex (evolutionary and spectroscopic), and [Fe/H] = +0.10 ± 0.05 (Fe II lines). The UV radiative properties of κ1 Cet indicate that its flux is some 35% lower than the current Sun's between 210 and 300 nm, it matches the Sun's at 170 nm, and increases to at least 2-7 times higher than the Sun's between 110 and 140 nm. The use of several indicators ascribes an age to κ1 Cet in the interval ~0.4-0.8 Gyr and the analysis of the theoretical Hertzsprung-Russell diagram (H-R) suggests a mass ~1.04 M sun. This star is thus a very close analog of the Sun when life arose on Earth and Mars is thought to have lost its surface bodies of liquid water. Photochemical models indicate that the enhanced UV emission leads to a significant increase in photodissociation rates compared with those commonly assumed of the early Earth. Our results show that reliable calculations of the

Wave chaos in a randomly inhomogeneous waveguide: spectral analysis of the finite-range evolution operator.

PubMed

Makarov, D V; Kon'kov, L E; Uleysky, M Yu; Petrov, P S

2013-01-01

The problem of sound propagation in a randomly inhomogeneous oceanic waveguide is considered. An underwater sound channel in the Sea of Japan is taken as an example. Our attention is concentrated on the domains of finite-range ray stability in phase space and their influence on wave dynamics. These domains can be found by means of the one-step Poincare map. To study manifestations of finite-range ray stability, we introduce the finite-range evolution operator (FREO) describing transformation of a wave field in the course of propagation along a finite segment of a waveguide. Carrying out statistical analysis of the FREO spectrum, we estimate the contribution of regular domains and explore their evanescence with increasing length of the segment. We utilize several methods of spectral analysis: analysis of eigenfunctions by expanding them over modes of the unperturbed waveguide, approximation of level-spacing statistics by means of the Berry-Robnik distribution, and the procedure used by A. Relano and coworkers [Relano et al., Phys. Rev. Lett. 89, 244102 (2002); Relano, Phys. Rev. Lett. 100, 224101 (2008)]. Comparing the results obtained with different methods, we find that the method based on the statistical analysis of FREO eigenfunctions is the most favorable for estimating the contribution of regular domains. It allows one to find directly the waveguide modes whose refraction is regular despite the random inhomogeneity. For example, it is found that near-axial sound propagation in the Sea of Japan preserves stability even over distances of hundreds of kilometers due to the presence of a shearless torus in the classical phase space. Increasing the acoustic wavelength degrades scattering, resulting in recovery of eigenfunction localization near periodic orbits of the one-step Poincaré map.

Second Symposium on Chemical Evolution and the Origin of Life

NASA Technical Reports Server (NTRS)

Devincenzi, D. L. (Editor); model. (Editor)

1986-01-01

Recent findings by NASA Exobiology investigators are reported. Scientific papers are presented in the following areas: cosmic evolution of biogenic compounds, prebiotic evolution (planetary and molecular), early evolution of life (biological and geochemical), evolution of advanced life, solar system exploration, and the Search for Extraterrestrial Intelligence (SETI).

Second Symposium on Chemical Evolution and the Origin of Life

DOE Office of Scientific and Technical Information (OSTI.GOV)

Devincenzi, D.L.; Dufour, P.A.

1986-05-01

Recent findings by NASA Exobiology investigators are reported. Scientific papers are presented in the following areas: cosmic evolution of biogenic compounds, prebiotic evolution (planetary and molecular), early evolution of life (biological and geochemical), evolution of advanced life, solar system exploration, and the Search for Extraterrestrial Intelligence (SETI).

Fatigue crack detection by nonlinear spectral correlation with a wideband input

NASA Astrophysics Data System (ADS)

Liu, Peipei; Sohn, Hoon

2017-04-01

Due to crack-induced nonlinearity, ultrasonic wave can distort, create accompanying harmonics, multiply waves of different frequencies, and, under resonance conditions, change resonance frequencies as a function of driving amplitude. All these nonlinear ultrasonic features have been widely studied and proved capable of detecting fatigue crack at its very early stage. However, in noisy environment, the nonlinear features might be drown in the noise, therefore it is difficult to extract those features using a conventional spectral density function. In this study, nonlinear spectral correlation is defined as a new nonlinear feature, which considers not only nonlinear modulations in ultrasonic waves but also spectral correlation between the nonlinear modulations. The proposed nonlinear feature is associated with the following two advantages: (1) stationary noise in the ultrasonic waves has little effect on nonlinear spectral correlation; and (2) the contrast of nonlinear spectral correlation between damage and intact conditions can be enhanced simply by using a wideband input. To validate the proposed nonlinear feature, micro fatigue cracks are introduced to aluminum plates by repeated tensile loading, and the experiment is conducted using surface-mounted piezoelectric transducers for ultrasonic wave generation and measurement. The experimental results confirm that the nonlinear spectral correlation can successfully detect fatigue crack with a higher sensitivity than the classical nonlinear coefficient.

Understanding the Early Evolution of M dwarf Extreme Ultraviolet Radiation

NASA Astrophysics Data System (ADS)

Peacock, Sarah; Barman, Travis; Shkolnik, Evgenya

2015-11-01

The chemistry and evolution of planetary atmospheres depends on the evolution of high-energy radiation emitted by its host star. High levels of extreme ultraviolet (EUV) radiation can drastically alter the atmospheres of terrestrial planets through ionizing, heating, expanding, chemically modifying and eroding them during the first few billion years of a planetary lifetime. While there is evidence that stars emit their highest levels of far and near ultraviolet (FUV; NUV) radiation in the earliest stages of their evolution, we are currently unable to directly measure the EUV radiation. Most previous stellar atmosphere models under-predict FUV and EUV emission from M dwarfs; here we present new models for M stars that include prescriptions for the hot, lowest density atmospheric layers (chromosphere, transition region and corona), from which this radiation is emitted. By comparing our model spectra to GALEX near and far ultraviolet fluxes, we are able to predict the evolution of EUV radiation for M dwarfs from 10 Myr to a few Gyr. This research is the next major step in the HAZMAT (HAbitable Zones and M dwarf Activity across Time) project to analyze how the habitable zone evolves with the evolving properties of stellar and planetary atmospheres.

Normalized spectral damage of a linear system over different spectral loading patterns

NASA Astrophysics Data System (ADS)

Kim, Chan-Jung

2017-08-01

Spectral fatigue damage is affected by different loading patterns; the damage may be accumulated in a different manner because the spectral pattern has an influence on stresses or strains. The normalization of spectral damage with respect to spectral loading acceleration is a novel solution to compare the accumulated fatigue damage over different spectral loading patterns. To evaluate the sensitivity of fatigue damage over different spectral loading cases, a simple notched specimen is used to conduct a uniaxial vibration test for two representative spectral patterns-random and harmonic-between 30 and 3000 Hz. The fatigue damage to the simple specimen is analyzed for different spectral loading cases using the normalized spectral damage from the measured response data for both acceleration and strain. The influence of spectral loading patterns is discussed based on these analyses.

Temporal expectation and spectral expectation operate in distinct fashion on neuronal populations.

PubMed

Hsu, Yi-Fang; Hämäläinen, Jarmo A; Waszak, Florian

2013-11-01

The formation of temporal expectation (i.e., the prediction of "when") is of prime importance to sensory processing. It can modulate sensory processing at early processing stages probably via the entrainment of low-frequency neuronal oscillations in the brain. However, sensory predictions involve not only temporal expectation but also spectral expectation (i.e., the prediction of "what"). Here we investigated how temporal expectation may interrelate with spectral expectation by explicitly setting up temporal expectation and spectral expectation in a target detection task. We found that reaction time (RT) was shorter when targets were temporally expected than when they were temporally unexpected. The temporal expectation effect was larger with than without spectral expectation. However, this interaction in the behavioural data did not result from an interaction in the electroencephalography (EEG), where we observed independent main effects of temporal expectation and spectral expectation. More precisely, we found that the N1 and P2 event-related potential (ERP) components and the entrainment of low-frequency neuronal oscillations were exclusively modulated by temporal expectation, whilst only the P3 ERP component was modulated by spectral expectation. Our results, thus, support the idea that temporal expectation and spectral expectation operate in distinct fashion on neuronal populations. © 2013 Elsevier Ltd. All rights reserved.

Major transitions in human evolution.

PubMed

Foley, Robert A; Martin, Lawrence; Mirazón Lahr, Marta; Stringer, Chris

2016-07-05

Evolutionary problems are often considered in terms of 'origins', and research in human evolution seen as a search for human origins. However, evolution, including human evolution, is a process of transitions from one state to another, and so questions are best put in terms of understanding the nature of those transitions. This paper discusses how the contributions to the themed issue 'Major transitions in human evolution' throw light on the pattern of change in hominin evolution. Four questions are addressed: (1) Is there a major divide between early (australopithecine) and later (Homo) evolution? (2) Does the pattern of change fit a model of short transformations, or gradual evolution? (3) Why is the role of Africa so prominent? (4) How are different aspects of adaptation-genes, phenotypes and behaviour-integrated across the transitions? The importance of developing technologies and approaches and the enduring role of fieldwork are emphasized.This article is part of the themed issue 'Major transitions in human evolution'. © 2016 The Author(s).

Solar Spectral Irradiance at 782 nm as Measured by the SES Sensor Onboard Picard

NASA Astrophysics Data System (ADS)

Meftah, M.; Hauchecorne, A.; Irbah, A.; Cessateur, G.; Bekki, S.; Damé, L.; Bolsée, D.; Pereira, N.

2016-04-01

Picard is a satellite dedicated to the simultaneous measurement of the total and solar spectral irradiance, the solar diameter, the solar shape, and to the Sun's interior through the methods of helioseismology. The satellite was launched on June 15, 2010, and pursued its data acquisitions until March 2014. A Sun Ecartometry Sensor (SES) was developed to provide the stringent pointing requirements of the satellite. The SES sensor produced an image of the Sun at 782 ± 2.5 nm. From the SES data, we obtained a new time series of the solar spectral irradiance at 782 nm from 2010 to 2014. During this period of Solar Cycle 24, the amplitude of the changes has been of the order of ± 0.08 %, corresponding to a range of about 2× 10^{-3} W m^{-2} nm^{-1}. SES observations provided a qualitatively consistent evolution of the solar spectral irradiance variability at 782 nm. SES data show similar amplitude variations with the semi-empirical model Spectral And Total Irradiance REconstruction for the Satellite era (SATIRE-S), whereas the Spectral Irradiance Monitor instrument (SIM) onboard the SOlar Radiation and Climate Experiment satellite (SORCE) highlights higher amplitudes.

Early Stage Evolution of Nourished Beach under High-energy, Macro-tidal Environment

NASA Astrophysics Data System (ADS)

Liu, J. H.; Cai, F.; Zhang, Z. W.; Li, B.

2017-02-01

Beach planform evolution, profile equilibration and sediment grain size change have been studied during the first 4 months from 4th September to 24th December 2011 after the construction of beach nourishment project at Longfengtou Beach, Haitan Bay. Monthly beach profiles, shoreline surveys, sediment sampling and nearshore wave measurements were carried out after implementation of the 1.3km long nourishment project which was completed on 20th August 2011. This study indicates that: (1) rapid beach profile equilibration occurred in the early stage after the construction of the project. A null point was observed, which is equal to the height of mean high tide, basically kept dynamic stable during the process of profile evolution. Shoreface sediment accumulated beneath the height of this point while erosion happened above it, the slope between the beach berm and the landward edge of low tidal zone became more gradual accompanied with seaward transportation of beach sediment. The velocity of beach slope adjustment in earlier period is faster than later. (2) Beach planform adjustment initiated simultaneously with the combination of the process of profile equilibration and longshore sediment transport. Shoreline retreated with an average distance of 11.1m and maximum of 31.02m from 4th September to 24th December, erosion in the south part was more serious than in the north, and 3 erosion hot spots were found along the coast. (3) Sediment redistributed with cross-shore profile equilibration, it showed a pattern across beach profile as medium sand (0.4-0.5mm) in beach berm, smaller (0.3-0.4mm) in high and middle tidal zone, coarse sand(0.6-1mm) in beach slope transitional zone, fine sand(0.1-0.25mm) in low tidal zone. The sediment grain size change of foreshore was rapidly response to the passage of storm surge.

Os isotopes in SNC meteorites and their implications to the early evolution of Mars and Earth

NASA Technical Reports Server (NTRS)

Jagoutz, E.; Luck, J. M.; Othman, D. Ben; Wanke, H.

1993-01-01

A new development on the measurement of the Os isotopic composition by mass spectrometry using negative ions opened a new field of applications. The Re-Os systematic provides time information on the differentiation of the nobel metals. The nobel metals are strongly partitioned into metal and sulphide phases, but also the generation of silicate melts might fractionate the Re-Os system. Compared to the other isotopic systems which are mainly dating the fractionation of the alkalis and alkali-earth elements, the Re-Os system is expected to disclose entirely new information about the geochemistry. Especially the differentiation and early evolution of the planets such as the formation of the core will be elucidated with this method.

Evolution of microwave sea ice signatures during early summer and midsummer in the marginal ice zone

NASA Technical Reports Server (NTRS)

Onstott, R. G.; Grenfell, T. C.; Matzler, C.; Luther, C. A.; Svendsen, E. A.

1987-01-01

Emissivities at frequencies from 5 to 94 GHz and backscatter at frequencies from 1 to 17 GHz were measured from sea ice in Fram Strait during the marginal Ice Zone Experiment in June and July of 1983 and 1984. The ice observed was primarily multiyear; the remainder, first-year ice, was often deformed. Results from this active and passive microwave study include the description of the evolution of the sea ice during early summer and midsummer; the absorption properties of summer snow; the interrelationship between ice thickness and the state and thickness of snow; and the modulation of the microwave signature, especially at the highest frequencies, by the freezing of the upper few centimeters of the ice.

Archean Pb Isotope Evolution: Implications for the Early Earth.

NASA Astrophysics Data System (ADS)

Vervoort, J. D.; Thorpe, R.; Albarede, F.; Blichert-Toft, J.

2008-12-01

.728 Ga (Normetal) to 2.70 Ga (Noranda). The Pb isotopic compositions from these galenas, when normalized to a common age of 2.7 Ga, define a highly linear array in 207Pb/204Pb vs. 206Pb/204Pb. This array is nearly coincident with the 2.7 Ga geochron with a slope that corresponds to an age of ~4.4 Ga and with an extraordinary large range of 207Pb/204Pb, about the same magnitude as modern MORB. These data have important implications for the evolution of the Archean mantle. First, the slope of the Abitibi Pb-Pb array and its coincidence with the 2.7 Ga geochron suggests widespread U-Pb differentiation within the first hundred million years of Earth's history. This may have been due to either core formation or silicate/melt differentiation due to widespread melting of the mantle (e.g., formation of a magma ocean). Second, variations in μ in the Abitibi mantle and the subsequent Pb isotopic heterogeneities, whatever their cause, have not been significantly changed from 4.4 until 2.7 Ga. This implies that changes in μ in the Abitibi mantle source between 4.4 and 2.7 Ga, such as would be caused by crust extraction or recycling of older crust into this region of the mantle, were insufficient to destroy the original μ variations created at 4.4 Ga. Therefore, it appears that this portion of the mantle had essentially remained isolated and undisturbed from the early Hadean until the late Archean.

A multigene phylogeny of Olpidium and its implications for early fungal evolution

PubMed Central

2011-01-01

Background From a common ancestor with animals, the earliest fungi inherited flagellated zoospores for dispersal in water. Terrestrial fungi lost all flagellated stages and reproduce instead with nonmotile spores. Olpidium virulentus (= Olpidium brassicae), a unicellular fungus parasitizing vascular plant root cells, seemed anomalous. Although Olpidium produces zoospores, in previous phylogenetic studies it appeared nested among the terrestrial fungi. Its position was based mainly on ribosomal gene sequences and was not strongly supported. Our goal in this study was to use amino acid sequences from four genes to reconstruct the branching order of the early-diverging fungi with particular emphasis on the position of Olpidium. Results We concatenated sequences from the Ef-2, RPB1, RPB2 and actin loci for maximum likelihood and Bayesian analyses. In the resulting trees, Olpidium virulentus, O. bornovanus and non-flagellated terrestrial fungi formed a strongly supported clade. Topology tests rejected monophyly of the Olpidium species with any other clades of flagellated fungi. Placing Olpidium at the base of terrestrial fungi was also rejected. Within the terrestrial fungi, Olpidium formed a monophyletic group with the taxa traditionally classified in the phylum Zygomycota. Within Zygomycota, Mucoromycotina was robustly monophyletic. Although without bootstrap support, Monoblepharidomycetes, a small class of zoosporic fungi, diverged from the basal node in Fungi. The zoosporic phylum Blastocladiomycota appeared as the sister group to the terrestrial fungi plus Olpidium. Conclusions This study provides strong support for Olpidium as the closest living flagellated relative of the terrestrial fungi. Appearing nested among hyphal fungi, Olpidium's unicellular thallus may have been derived from ancestral hyphae. Early in their evolution, terrestrial hyphal fungi may have reproduced with zoospores. PMID:22085768

Trojan Tour and Rendezvous (TTR): A New Frontiers Mission to Explore the Origin and Evolution of the Early Solar System

NASA Astrophysics Data System (ADS)

Bell, J. F., III; Olkin, C.; Castillo, J. C.

2015-12-01

The orbital properties, compositions, and physical properties of the diverse populations of small outer solar system bodies provide a forensic map of how our solar system formed and evolved. Perhaps the most potentially diagnostic, but least explored, of those populations are the Jupiter Trojan asteroids, which orbit at ~5 AU in the L4 and L5 Lagrange points of Jupiter. More than 6200 Jupiter Trojans are presently known, but these are predicted to be only a small fraction of the 500,000 to 1 million Trojans >1 km in size. The Trojans are hypothesized to be either former Kuiper Belt Objects (KBOs) that were scattered into the inner solar system by early giant planet migration and then trapped in the 1:1 Jupiter mean motion resonance, or bodies formed near 5 AU in a much more quiescent early solar system, and then trapped at L4 and L5. The 2011 Planetary Science Decadal Survey identified important questions about the origin and evolution of the solar system that can be addressed by studying of the Trojan asteroids, including: (a) How did the giant planets and their satellite systems accrete, and is there evidence that they migrated to new orbital positions? (b) What is the relationship between large and small KBOs? Is the small population derived by impact disruption of the large one? (c) What kinds of surface evolution, radiation chemistry, and surface-atmosphere interactions occur on distant icy primitive bodies? And (d) What are the sources of asteroid groups (Trojans and Centaurs) that remain to be explored by spacecraft? The Trojan Tour and Rendezvous (TTR) is a New Frontiers-class mission designed to answer these questions, and to test hypotheses for early giant planet migration and solar system evolution. Via close flybys of a large number of these objects,, and orbital characterization of at least one large Trojan, TTR will enable the first-time exploration of this population. Our primary mission goals are to characterize the overall surface geology

Deep, Broadband Spectral Line Surveys of Molecule-rich Interstellar Clouds

DOE Office of Scientific and Technical Information (OSTI.GOV)

Widicus Weaver, Susanna L.; Laas, Jacob C.; Zou, Luyao

2017-09-01

Spectral line surveys are an indispensable tool for exploring the physical and chemical evolution of astrophysical environments due to the vast amount of data that can be obtained in a relatively short amount of time. We present deep, broadband spectral line surveys of 30 interstellar clouds using two broadband λ  = 1.3 mm receivers at the Caltech Submillimeter Observatory. This information can be used to probe the influence of physical environment on molecular complexity. We observed a wide variety of sources to examine the relative abundances of organic molecules as they relate to the physical properties of the source (i.e., temperature,more » density, dynamics, etc.). The spectra are highly sensitive, with noise levels ≤25 mK at a velocity resolution of ∼0.35 km s{sup −1}. In the initial analysis presented here, column densities and rotational temperatures have been determined for the molecular species that contribute significantly to the spectral line density in this wavelength regime. We present these results and discuss their implications for complex molecule formation in the interstellar medium.« less

Divergence times and the evolution of morphological complexity in an early land plant lineage (Marchantiopsida) with a slow molecular rate.

PubMed

Villarreal A, Juan Carlos; Crandall-Stotler, Barbara J; Hart, Michelle L; Long, David G; Forrest, Laura L

2016-03-01

We present a complete generic-level phylogeny of the complex thalloid liverworts, a lineage that includes the model system Marchantia polymorpha. The complex thalloids are remarkable for their slow rate of molecular evolution and for being the only extant plant lineage to differentiate gas exchange tissues in the gametophyte generation. We estimated the divergence times and analyzed the evolutionary trends of morphological traits, including air chambers, rhizoids and specialized reproductive structures. A multilocus dataset was analyzed using maximum likelihood and Bayesian approaches. Relative rates were estimated using local clocks. Our phylogeny cements the early branching in complex thalloids. Marchantia is supported in one of the earliest divergent lineages. The rate of evolution in organellar loci is slower than for other liverwort lineages, except for two annual lineages. Most genera diverged in the Cretaceous. Marchantia polymorpha diversified in the Late Miocene, giving a minimum age estimate for the evolution of its sex chromosomes. The complex thalloid ancestor, excluding Blasiales, is reconstructed as a plant with a carpocephalum, with filament-less air chambers opening via compound pores, and without pegged rhizoids. Our comprehensive study of the group provides a temporal framework for the analysis of the evolution of critical traits essential for plants during land colonization. © 2015 Royal Botanic Garden Edinburgh. New Phytologist © 2015 New Phytologist Trust.

Early evolution of Martian volatiles: Nitrogen and noble gas components in ALH84001 and Chassigny

NASA Astrophysics Data System (ADS)

Mathew, K. J.; Marti, K.

2001-01-01

Studies on SNC meteorites have permitted the characterization of modern Martian atmospheric components as well as indigenous Martian nitrogen and solar-type xenon. New isotopic and elemental abundances of noble gases and nitrogen in ALH84001 and Chassigny provide important constraints on the early evolution of the planet. A primitive solar Xe component (Chass-S) and an evolved Xe component (Chass-E), augmented with fission Xe are identified in Chassigny. Both components represent interior reservoirs of Mars and are characterized by low 129Xe/132Xe (<1.07) and by distinct elemental ratios 36Ar/132Xe<5 and >130, respectively. Light nitrogen (δ15N=-30‰) is associated with the Chass-S component and is enriched in melt inclusions in olivine. An ancient (presumably incorporated ~4 Gyr ago) evolved Martian atmospheric component is identified in ALH84001 and has the following signatures: 129Xe/132Xe=2.16, 36Ar/38Ar>=5.0, 36Ar/132Xe=~50, 84Kr/132Xe=~6, and δ15N=7‰. The trapped Xe component in ALH84001 is not isotopically fractionated. We observe major shifts in nitrogen signatures due to cosmogenic N component in both Chassigny and ALH84001. A heavy nitrogen component of comparable magnitude (δ15N>150‰) has previously been interpreted as (heavy) Martian atmospheric N. In situ produced fission Xe components, due to 244Pu in ALH84001 and due to 238U in Chassigny, are identified. The ALH84001 data strongly constrain exchanges of Martian atmospheric and interior reservoirs. Mars retained abundant fission Xe components, and this may account for the low observed fission Xe component in the modern Martian atmosphere. Chronometric information regarding the evolution of the early Martian atmosphere can be secured from the relative abundances of radiogenic and fission Xe, as ~80% of the Martian 129Xer is observed in the atmospheric 129Xe/132Xe ratio ~ 4 Gyr ago.

EVOLUTION OF GALAXIES AND THEIR ENVIRONMENTS AT z = 0.1-3 IN COSMOS

DOE Office of Scientific and Technical Information (OSTI.GOV)

Scoville, N.; Benson, A.; Fu, Hai

2013-05-01

Large-scale structures (LSSs) out to z < 3.0 are measured in the Cosmic Evolution Survey (COSMOS) using extremely accurate photometric redshifts (photoz). The K{sub s} -band-selected sample (from Ultra-Vista) is comprised of 155,954 galaxies. Two techniques-adaptive smoothing and Voronoi tessellation-are used to estimate the environmental densities within 127 redshift slices. Approximately 250 statistically significant overdense structures are identified out to z = 3.0 with shapes varying from elongated filamentary structures to more circularly symmetric concentrations. We also compare the densities derived for COSMOS with those based on semi-analytic predictions for a {Lambda}CDM simulation and find excellent overall agreement between themore » mean densities as a function of redshift and the range of densities. The galaxy properties (stellar mass, spectral energy distributions (SEDs), and star formation rates (SFRs)) are strongly correlated with environmental density and redshift, particularly at z < 1.0-1.2. Classifying the spectral type of each galaxy using the rest-frame b - i color (from the photoz SED fitting), we find a strong correlation of early-type galaxies (E-Sa) with high-density environments, while the degree of environmental segregation varies systematically with redshift out to z {approx} 1.3. In the highest density regions, 80% of the galaxies are early types at z = 0.2 compared to only 20% at z = 1.5. The SFRs and the star formation timescales exhibit clear environmental correlations. At z > 0.8, the SFR density is uniformly distributed over all environmental density percentiles, while at lower redshifts the dominant contribution is shifted to galaxies in lower density environments.« less

Reconstruction of solar spectral irradiance since the Maunder minimum

NASA Astrophysics Data System (ADS)

Krivova, N. A.; Vieira, L. E. A.; Solanki, S. K.

2010-12-01

Solar irradiance is the main external driver of the Earth's climate. Whereas the total solar irradiance is the main source of energy input into the climate system, solar UV irradiance exerts control over chemical and physical processes in the Earth's upper atmosphere. The time series of accurate irradiance measurements are, however, relatively short and limit the assessment of the solar contribution to the climate change. Here we reconstruct solar total and spectral irradiance in the range 115-160,000 nm since 1610. The evolution of the solar photospheric magnetic flux, which is a central input to the model, is appraised from the historical record of the sunspot number using a simple but consistent physical model. The model predicts an increase of 1.25 W/m2, or about 0.09%, in the 11-year averaged solar total irradiance since the Maunder minimum. Also, irradiance in individual spectral intervals has generally increased during the past four centuries, the magnitude of the trend being higher toward shorter wavelengths. In particular, the 11-year averaged Ly-α irradiance has increased by almost 50%. An exception is the spectral interval between about 1500 and 2500 nm, where irradiance has slightly decreased (by about 0.02%).

Why do leafcutter bees cut leaves? New insights into the early evolution of bees.

PubMed

Litman, Jessica R; Danforth, Bryan N; Eardley, Connal D; Praz, Christophe J

2011-12-07

Stark contrasts in clade species diversity are reported across the tree of life and are especially conspicuous when observed in closely related lineages. The explanation for such disparity has often been attributed to the evolution of key innovations that facilitate colonization of new ecological niches. The factors underlying diversification in bees remain poorly explored. Bees are thought to have originated from apoid wasps during the Mid-Cretaceous, a period that coincides with the appearance of angiosperm eudicot pollen grains in the fossil record. The reliance of bees on angiosperm pollen and their fundamental role as angiosperm pollinators have contributed to the idea that both groups may have undergone simultaneous radiations. We demonstrate that one key innovation--the inclusion of foreign material in nest construction--underlies both a massive range expansion and a significant increase in the rate of diversification within the second largest bee family, Megachilidae. Basal clades within the family are restricted to deserts and exhibit plesiomorphic features rarely observed among modern bees, but prevalent among apoid wasps. Our results suggest that early bees inherited a suite of behavioural traits that acted as powerful evolutionary constraints. While the transition to pollen as a larval food source opened an enormous ecological niche for the early bees, the exploitation of this niche and the subsequent diversification of bees only became possible after bees had evolved adaptations to overcome these constraints.

Divergent evolution of life span associated with mitochondrial DNA evolution.

PubMed

Stojković, Biljana; Sayadi, Ahmed; Đorđević, Mirko; Jović, Jelena; Savković, Uroš; Arnqvist, Göran

2017-01-01

Mitochondria play a key role in ageing. The pursuit of genes that regulate variation in life span and ageing have shown that several nuclear-encoded mitochondrial genes are important. However, the role of mitochondrial encoded genes (mtDNA) is more controversial and our appreciation of the role of mtDNA for the evolution of life span is limited. We use replicated lines of seed beetles that have been artificially selected for long or short life for >190 generations, now showing dramatic phenotypic differences, to test for a possible role of mtDNA in the divergent evolution of ageing and life span. We show that these divergent selection regimes led to the evolution of significantly different mtDNA haplotype frequencies. Selection for a long life and late reproduction generated positive selection for one specific haplotype, which was fixed in most such lines. In contrast, selection for reproduction early in life led to both positive selection as well as negative frequency-dependent selection on two different haplotypes, which were both present in all such lines. Our findings suggest that the evolution of life span was in part mediated by mtDNA, providing support for the emerging general tenet that adaptive evolution of life-history syndromes may involve mtDNA. © 2016 The Author(s). Evolution © 2016 The Society for the Study of Evolution.

A multi-wavelength study of the evolution of early-type galaxies in groups: the ultraviolet view

NASA Astrophysics Data System (ADS)

Rampazzo, R.; Mazzei, P.; Marino, A.; Bianchi, L.; Plana, H.; Trinchieri, G.; Uslenghi, M.; Wolter, A.

2018-04-01

The ultraviolet-optical colour magnitude diagram of rich galaxy groups is characterised by a well developed Red Sequence, a Blue Cloud and the so-called Green Valley. Loose, less evolved groups of galaxies which are probably not virialised yet may lack a well defined Red Sequence. This is actually explained in the framework of galaxy evolution. We are focussing on understanding galaxy migration towards the Red Sequence, checking for signatures of such a transition in their photometric and morphological properties. We report on the ultraviolet properties of a sample of early-type (ellipticals+S0s) galaxies inhabiting the Red Sequence. The analysis of their structures, as derived by fitting a Sérsic law to their ultraviolet luminosity profiles, suggests the presence of an underlying disk. This is the hallmark of dissipation processes that still must have a role to play in the evolution of this class of galaxies. Smooth particle hydrodynamic simulations with chemo-photometric implementations able to match the global properties of our targets are used to derive their evolutionary paths through ultraviolet-optical colour magnitude diagrams, providing some fundamental information such as the crossing time through the Green Valley, which depends on their luminosity. The transition from the Blue Cloud to the Red Sequence takes several Gyrs, being about 3-5 Gyr for the brightest galaxies and longer for fainter ones, if occurring. The photometric study of nearby galaxy structures in the ultraviolet is seriously hampered by either the limited field of view of the cameras (e.g., in Hubble Space Telescope) or by the low spatial resolution of the images (e.g., in the Galaxy Evolution Explorer). Current missions equipped with telescopes and cameras sensitive to ultraviolet wavelengths, such as Swift- UVOT and Astrosat-UVIT, provide a relatively large field of view and a better resolution than the Galaxy Evolution Explorer. More powerful ultraviolet instruments (size, resolution

Oxygen and hydrogen peroxide in the early evolution of life on earth: in silico comparative analysis of biochemical pathways.

PubMed

Slesak, Ireneusz; Slesak, Halina; Kruk, Jerzy

2012-08-01

In the Universe, oxygen is the third most widespread element, while on Earth it is the most abundant one. Moreover, oxygen is a major constituent of all biopolymers fundamental to living organisms. Besides O(2), reactive oxygen species (ROS), among them hydrogen peroxide (H(2)O(2)), are also important reactants in the present aerobic metabolism. According to a widely accepted hypothesis, aerobic metabolism and many other reactions/pathways involving O(2) appeared after the evolution of oxygenic photosynthesis. In this study, the hypothesis was formulated that the Last Universal Common Ancestor (LUCA) was at least able to tolerate O(2) and detoxify ROS in a primordial environment. A comparative analysis was carried out of a number of the O(2)-and H(2)O(2)-involving metabolic reactions that occur in strict anaerobes, facultative anaerobes, and aerobes. The results indicate that the most likely LUCA possessed O(2)-and H(2)O(2)-involving pathways, mainly reactions to remove ROS, and had, at least in part, the components of aerobic respiration. Based on this, the presence of a low, but significant, quantity of H(2)O(2) and O(2) should be taken into account in theoretical models of the early Archean atmosphere and oceans and the evolution of life. It is suggested that the early metabolism involving O(2)/H(2)O(2) was a key adaptation of LUCA to already existing weakly oxic zones in Earth's primordial environment.

Neoproterozoic-Early Paleozoic Peri-Pacific Accretionary Evolution of the Mongolian Collage System: Insights From Geochemical and U-Pb Zircon Data From the Ordovician Sedimentary Wedge in the Mongolian Altai

NASA Astrophysics Data System (ADS)

Jiang, Y. D.; Schulmann, K.; Kröner, A.; Sun, M.; Lexa, O.; Janoušek, V.; Buriánek, D.; Yuan, C.; Hanžl, P.

2017-11-01

Neoproterozoic to early Paleozoic accretionary processes of the Central Asian Orogenic Belt have been evaluated so far mainly using the geology of ophiolites and/or magmatic arcs. Thus, the knowledge of the nature and evolution of associated sedimentary prisms remains fragmentary. We carried out an integrated geological, geochemical, and zircon U-Pb geochronological study on a giant Ordovician metasedimentary succession of the Mongolian Altai Mountains. This succession is characterized by dominant terrigenous components mixed with volcanogenic material. It is chemically immature, compositionally analogous to graywacke, and marked by significant input of felsic to intermediate arc components, pointing to an active continental margin depositional setting. Detrital zircon U-Pb ages suggest a source dominated by products of early Paleozoic magmatism prevailing during the Cambrian-Ordovician and culminating at circa 500 Ma. We propose that the Ordovician succession forms an "Altai sedimentary wedge," the evolution of which can be linked to the geodynamics of the margins of the Mongolian Precambrian Zavhan-Baydrag blocks. This involved subduction reversal from southward subduction of a passive continental margin (Early Cambrian) to the development of the "Ikh-Mongol Magmatic Arc System" and the giant Altai sedimentary wedge above a north dipping subduction zone (Late Cambrian-Ordovician). Such a dynamic process resembles the tectonic evolution of the peri-Pacific accretionary Terra Australis Orogen. A new model reconciling the Baikalian metamorphic belt along the southern Siberian Craton with peri-Pacific Altai accretionary systems fringing the Mongolian microcontinents is proposed to explain the Cambro-Ordovician geodynamic evolution of the Mongolian collage system.

Relevance of Spectral Cues for Auditory Spatial Processing in the Occipital Cortex of the Blind

PubMed Central

Voss, Patrice; Lepore, Franco; Gougoux, Frédéric; Zatorre, Robert J.

2011-01-01

We have previously shown that some blind individuals can localize sounds more accurately than their sighted counterparts when one ear is obstructed, and that this ability is strongly associated with occipital cortex activity. Given that spectral cues are important for monaurally localizing sounds when one ear is obstructed, and that blind individuals are more sensitive to small spectral differences, we hypothesized that enhanced use of spectral cues via occipital cortex mechanisms could explain the better performance of blind individuals in monaural localization. Using positron-emission tomography (PET), we scanned blind and sighted persons as they discriminated between sounds originating from a single spatial position, but with different spectral profiles that simulated different spatial positions based on head-related transfer functions. We show here that a sub-group of early blind individuals showing superior monaural sound localization abilities performed significantly better than any other group on this spectral discrimination task. For all groups, performance was best for stimuli simulating peripheral positions, consistent with the notion that spectral cues are more helpful for discriminating peripheral sources. PET results showed that all blind groups showed cerebral blood flow increases in the occipital cortex; but this was also the case in the sighted group. A voxel-wise covariation analysis showed that more occipital recruitment was associated with better performance across all blind subjects but not the sighted. An inter-regional covariation analysis showed that the occipital activity in the blind covaried with that of several frontal and parietal regions known for their role in auditory spatial processing. Overall, these results support the notion that the superior ability of a sub-group of early-blind individuals to localize sounds is mediated by their superior ability to use spectral cues, and that this ability is subserved by cortical processing in

Evolution of the early Antarctic ice ages

NASA Astrophysics Data System (ADS)

Liebrand, Diederik; de Bakker, Anouk T. M.; Beddow, Helen M.; Wilson, Paul A.; Bohaty, Steven M.; Ruessink, Gerben; Pälike, Heiko; Batenburg, Sietske J.; Hilgen, Frederik J.; Hodell, David A.; Huck, Claire E.; Kroon, Dick; Raffi, Isabella; Saes, Mischa J. M.; van Dijk, Arnold E.; Lourens, Lucas J.

2017-04-01

Understanding the stability of the early Antarctic ice cap in the geological past is of societal interest because present-day atmospheric CO2 concentrations have reached values comparable to those estimated for the Oligocene and the Early Miocene epochs. Here we analyze a new high-resolution deep-sea oxygen isotope (δ18O) record from the South Atlantic Ocean spanning an interval between 30.1 My and 17.1 My ago. The record displays major oscillations in deep-sea temperature and Antarctic ice volume in response to the ˜110-ky eccentricity modulation of precession. Conservative minimum ice volume estimates show that waxing and waning of at least ˜85 to 110% of the volume of the present East Antarctic Ice Sheet is required to explain many of the ˜110-ky cycles. Antarctic ice sheets were typically largest during repeated glacial cycles of the mid-Oligocene (˜28.0 My to ˜26.3 My ago) and across the Oligocene-Miocene Transition (˜23.0 My ago). However, the high-amplitude glacial-interglacial cycles of the mid-Oligocene are highly symmetrical, indicating a more direct response to eccentricity modulation of precession than their Early Miocene counterparts, which are distinctly asymmetrical—indicative of prolonged ice buildup and delayed, but rapid, glacial terminations. We hypothesize that the long-term transition to a warmer climate state with sawtooth-shaped glacial cycles in the Early Miocene was brought about by subsidence and glacial erosion in West Antarctica during the Late Oligocene and/or a change in the variability of atmospheric CO2 levels on astronomical time scales that is not yet captured in existing proxy reconstructions.

Evolution of the early Antarctic ice ages

PubMed Central

de Bakker, Anouk T. M.; Beddow, Helen M.; Wilson, Paul A.; Bohaty, Steven M.; Pälike, Heiko; Batenburg, Sietske J.; Hilgen, Frederik J.; Hodell, David A.; Huck, Claire E.; Kroon, Dick; Raffi, Isabella; Saes, Mischa J. M.; van Dijk, Arnold E.; Lourens, Lucas J.

2017-01-01

Understanding the stability of the early Antarctic ice cap in the geological past is of societal interest because present-day atmospheric CO2 concentrations have reached values comparable to those estimated for the Oligocene and the Early Miocene epochs. Here we analyze a new high-resolution deep-sea oxygen isotope (δ18O) record from the South Atlantic Ocean spanning an interval between 30.1 My and 17.1 My ago. The record displays major oscillations in deep-sea temperature and Antarctic ice volume in response to the ∼110-ky eccentricity modulation of precession. Conservative minimum ice volume estimates show that waxing and waning of at least ∼85 to 110% of the volume of the present East Antarctic Ice Sheet is required to explain many of the ∼110-ky cycles. Antarctic ice sheets were typically largest during repeated glacial cycles of the mid-Oligocene (∼28.0 My to ∼26.3 My ago) and across the Oligocene−Miocene Transition (∼23.0 My ago). However, the high-amplitude glacial−interglacial cycles of the mid-Oligocene are highly symmetrical, indicating a more direct response to eccentricity modulation of precession than their Early Miocene counterparts, which are distinctly asymmetrical—indicative of prolonged ice buildup and delayed, but rapid, glacial terminations. We hypothesize that the long-term transition to a warmer climate state with sawtooth-shaped glacial cycles in the Early Miocene was brought about by subsidence and glacial erosion in West Antarctica during the Late Oligocene and/or a change in the variability of atmospheric CO2 levels on astronomical time scales that is not yet captured in existing proxy reconstructions. PMID:28348211

Utilizing the ratio and the summation of two spectral lines for estimation of optical depth: Focus on thick plasmas

NASA Astrophysics Data System (ADS)

Rezaei, Fatemeh; Tavassoli, Seyed Hassan

2016-11-01

In this paper, a study is performed on the spectral lines of plasma radiations created from focusing of the Nd:YAG laser on Al standard alloys at atmospheric air pressure. A new theoretical method is presented to investigate the evolution of the optical depth of the plasma based on the radiative transfer equation, in LTE condition. This work relies on the Boltzmann distribution, lines broadening equations, and as well as the self-absorption relation. Then, an experimental set-up is devised to extract some of plasma parameters such as temperature from modified line ratio analysis, electron density from Stark broadening mechanism, line intensities of two spectral lines in the same order of ionization from similar species, and the plasma length from the shadowgraphy section. In this method, the summation and the ratio of two spectral lines are considered for evaluation of the temporal variations of the plasma parameters in a LIBS homogeneous plasma. The main advantage of this method is that it comprises the both of thin and thick laser induced plasmas without straight calculation of self-absorption coefficient. Moreover, the presented model can also be utilized for evaluation the transition of plasma from the thin condition to the thick one. The results illustrated that by measuring the line intensities of two spectral lines at different evolution times, the plasma cooling and the growth of the optical depth can be followed.

Charge-Transfer Processes in Warm Dense Matter: Selective Spectral Filtering for Laser-Accelerated Ion Beams

NASA Astrophysics Data System (ADS)

Braenzel, J.; Barriga-Carrasco, M. D.; Morales, R.; Schnürer, M.

2018-05-01

We investigate, both experimentally and theoretically, how the spectral distribution of laser accelerated carbon ions can be filtered by charge exchange processes in a double foil target setup. Carbon ions at multiple charge states with an initially wide kinetic energy spectrum, from 0.1 to 18 MeV, were detected with a remarkably narrow spectral bandwidth after they had passed through an ultrathin and partially ionized foil. With our theoretical calculations, we demonstrate that this process is a consequence of the evolution of the carbon ion charge states in the second foil. We calculated the resulting spectral distribution separately for each ion species by solving the rate equations for electron loss and capture processes within a collisional radiative model. We determine how the efficiency of charge transfer processes can be manipulated by controlling the ionization degree of the transfer matter.

Time-resolved spectral investigations of laser light induced microplasma

NASA Astrophysics Data System (ADS)

Nánai, L.; Hevesi, I.

1992-01-01

The dynamical and spectral properties of an optical breakdown microplasma created by pulses of different lasers on surfaces of insulators (KCI), metals (Cu) and semiconductors (V 2O 5), have been investigated. Experiments were carried out in air and vacuum using different wavelengths (λ = 0.694μm, type OGM-20,λ = 1.06μm with a home-made laser based on neodymium glass crystal, and λ = 10.6μm, similarly home-made) and pulse durations (Q-switched and free-running regimes). To follow the integral, dynamical and spectral characteristics of the luminous spot of microplasma we have used fast cameras (SFR-2M, IMACON-HADLAND), a high speed spectral camera (AGAT-2) and a spectrograph (STE-1). It has been shown that the microplasma consists of two parts: fast front (peak) with τ≈100 ns and slow front (tail) with τ≈1μs durations. The detonation front speed is of the order of ≈10 5 cm s -1 and follows the temporal dependence of to t0.4. It depends on the composition of the surrounding gas and its pressure and could be connected with quick evaporation of the material investigated (peak) and optical breakdown of the ambient gaseous atmosphere (tail). From the delay in appearance of different characteristic spectral lines of the target material and its gaseous surrounding we have shown that the evolution of the microplasma involves evaporation and ionization of the atoms of the parent material followed by optical breakdown due to the incident and absorbed laser light, together with microplasma expansion.

Early evolution of multifocal optics for well-focused colour vision in vertebrates.

PubMed

Gustafsson, O S E; Collin, S P; Kröger, R H H

2008-05-01

Jawless fishes (Agnatha; lampreys and hagfishes) most closely resemble the earliest stage in vertebrate evolution and lamprey-like animals already existed in the Lower Cambrian [about 540 million years ago (MYA)]. Agnathans are thought to have separated from the main vertebrate lineage at least 500 MYA. Hagfishes have primitive eyes, but the eyes of adult lampreys are well-developed. The southern hemisphere lamprey, Geotria australis, possesses five types of opsin genes, three of which are clearly orthologous to the opsin genes of jawed vertebrates. This suggests that the last common ancestor of all vertebrate lineages possessed a complex colour vision system. In the eyes of many bony fishes and tetrapods, well-focused colour images are created by multifocal crystalline lenses that compensate for longitudinal chromatic aberration. To trace the evolutionary origins of multifocal lenses, we studied the optical properties of the lenses in four species of lamprey (Geotria australis, Mordacia praecox, Lampetra fluviatilis and Petromyzon marinus), with representatives from all three of the extant lamprey families. Multifocal lenses are present in all lampreys studied. This suggests that the ability to create well-focused colour images with multifocal optical systems also evolved very early.

The light up and early evolution of high redshift Supermassive Black Holes

NASA Astrophysics Data System (ADS)

Comastri, Andrea; Brusa, Marcella; Aird, James; Lanzuisi, Giorgio

2016-07-01

The known AGN population at z > 6 is made by luminous optical QSO hosting Supermassive Black Holes (M > 10 ^{9}solar masses), likely to represent the tip of the iceberg of the luminosity and mass function. According to theoretical models for structure formation, Massive Black Holes (M _{BH} 10^{4-7} solar masses) are predicted to be abundant in the early Universe (z > 6). The majority of these lower luminosity objects are expected to be obscured and severely underepresented in current optical near-infrared surveys. The detection of such a population would provide unique constraints on the Massive Black Holes formation mechanism and subsequent growth and is within the capabilities of deep and large area ATHENA surveys. After a summary of the state of the art of present deep XMM and Chandra surveys, at z >3-6 also mentioning the expectations for the forthcoming eROSITA all sky survey; I will present the observational strategy of future multi-cone ATHENA Wide Field Imager (WFI) surveys and the expected breakthroughs in the determination of the luminosity function and its evolution at high (> 4) and very high (>6) redshifts.

Spectral Confirmation of New Galactic LBV and WN Stars Associated With Mid-IR Nebulae

NASA Astrophysics Data System (ADS)

Stringfellow, Guy; Gvaramadze, Vasilii V.

2014-08-01

Luminous Blue Variable (LBV) stars represent an extremely rare class and short-lived phase in the lives of very luminous massive stars with high mass loss rates. Extragalactic LBVs are responsible for producing false supernovae (SN), the SN Impostors, and have been directly linked with the progenitors of actual SN, indicating the LBV phase can be a final endpoint for massive star evolution. Yet only a few confirmed LBVs have been identified in the Galaxy. Their stellar evolution is poorly constrained by observations, and the physical reason for their unstable nature, both in terms of moderate spectral and photometric variability of a few magnitudes and the giant eruptions a la η Car that rival SN explosions, remains a mystery. Newly discovered mid-IR shells act as signposts, pointing to the central massive stars (LBV and Wolf-Rayet [WR] stars) that produced them. We have undertaken a spectroscopic survey of possible progenitor stars within these shells and are discovering that many are LBVs and WN-type WR transitional stars. We propose to extend this IR spectral survey to the south to search for new progenitor stars associated with dozens of newly identified shells. This survey should result in a substantial increase of new WRs and candidate LBVs for continued future study. Spectral analysis will yield new insights into the winds and physical properties of these rare and important objects, and lead to a better understanding of the physics driving giant eruptions.

Cosmic Evolution: The History of an Idea

NASA Astrophysics Data System (ADS)

Dick, S. J.

2004-12-01

Cosmic evolution has become the conceptual framework within which modern astronomy is undertaken, and is the guiding principle of major NASA programs such as Origins and Astrobiology. While there are 19th- and early 20th century antecedents, as in the work of Robert Chambers, Herbert Spencer and Lawrence Henderson, it was only at mid-20th century that full-blown cosmic evolution began to be articulated and accepted as a research paradigm extending from the Big Bang to life, intelligence and the evolution of culture. Harlow Shapley was particularly important in spreading the idea to the public in the 1950s, and NASA embraced the idea in the 1970s as part of its SETI program and later its exobiology and astrobiology programs. Eric Chaisson, Carl Sagan and others were early proponents of cosmic evolution, and it continues to be elaborated in ever more subtle form as a research program and a philosophy. It has even been termed "Genesis for the 21st century." This paper documents the origin and development of the idea and offers a glimpse of where it could lead if cultural evolution is taken seriously, possibly leading to the concept of a postbiological universe.

The evolution of surface magnetic fields in young solar-type stars II: the early main sequence (250-650 Myr)

NASA Astrophysics Data System (ADS)

Folsom, C. P.; Bouvier, J.; Petit, P.; Lèbre, A.; Amard, L.; Palacios, A.; Morin, J.; Donati, J.-F.; Vidotto, A. A.

2018-03-01

There is a large change in surface rotation rates of sun-like stars on the pre-main sequence and early main sequence. Since these stars have dynamo-driven magnetic fields, this implies a strong evolution of their magnetic properties over this time period. The spin-down of these stars is controlled by interactions between stellar and magnetic fields, thus magnetic evolution in turn plays an important role in rotational evolution. We present here the second part of a study investigating the evolution of large-scale surface magnetic fields in this critical time period. We observed stars in open clusters and stellar associations with known ages between 120 and 650 Myr, and used spectropolarimetry and Zeeman Doppler Imaging to characterize their large-scale magnetic field strength and geometry. We report 15 stars with magnetic detections here. These stars have masses from 0.8 to 0.95 M⊙, rotation periods from 0.326 to 10.6 d, and we find large-scale magnetic field strengths from 8.5 to 195 G with a wide range of geometries. We find a clear trend towards decreasing magnetic field strength with age, and a power law decrease in magnetic field strength with Rossby number. There is some tentative evidence for saturation of the large-scale magnetic field strength at Rossby numbers below 0.1, although the saturation point is not yet well defined. Comparing to younger classical T Tauri stars, we support the hypothesis that differences in internal structure produce large differences in observed magnetic fields, however for weak-lined T Tauri stars this is less clear.

The Genomic Evolution of Prostate Cancer

DTIC Science & Technology

2017-06-01

management and grant writing skills. 15. SUBJECT TERMS Cancer genetics , tumor evolution, tumor heterogeneity, prostate cancer, exome sequencing 16...aggressive disease, it is unclear if the genetic alterations more common in late disease are present early on, but at low frequency, or if they only...from localized to metastatic prostate cancer. 2. KEYWORDS: Cancer genetics , tumor evolution, tumor heterogeneity, prostate cancer, exome sequencing

The evolution of Phanerozoic seawater - Isotope paleothermometry finds consensus on Early Paleozoic warmth and constant seawater δ18O

NASA Astrophysics Data System (ADS)

Grossman, E. L.; Henkes, G. A.; Passey, B. H.; Shenton, B.; Yancey, T. E.; Perez-Huerta, A.

2015-12-01

Evolution of metazoan life is closely linked to the Phanerozoic evolution of ocean temperatures and chemistry. Oxygen isotopic evidence for early Phanerozoic paleotemperatures has been equivocal, with decreasing δ18O values with age being interpreted as warmer early oceans, decreasing seawater δ18O with age, or increasing diagenetic alteration in older samples. Here we compare an updated compilation of oxygen isotope data for carbonate and phosphate fossils and microfossils (Grossman, 2012, Geol. Time Scale, Elsevier, 195-220) with a compilation of new and existing clumped isotope data. Importantly, these data are curated based on sample preservation with special consideration given to screening techniques, and tectonic and burial history. Burial history is critical in the preservation of carbonate clumped isotope temperatures in particular, which can undergo reordering in the solid state. We use a model derived for reordering kinetics (Henkes et al., 2014, Geochim. Cosmochim. Acta 139:362-382) to screen clumped isotope data for the effects of solid-state burial alteration. With minor but significant exceptions (Late Cretaceous, Early Triassic), average δ18O values (4 m.y. window, 2 m.y. steps) for post-Devonian brachiopods, belemnites, and foraminifera, representing tropical-subtropical surface ocean conditions, yield average isotopic temperatures below 30°C (assuming a seawater δ18O value [ -1‰ VSMOW] of an "ice-free" world). In contrast, Ordovician to Devonian data show sustained temperatures of 35-40°C. Likewise, isotopic paleotemperatures from conodont apatite, known to be resistant to isotopic exchange, follow the same pattern. Clumped isotope data derived from Paleozoic brachiopod shells that experienced minimal burial (< 100 °C) and <1% reordering according to the taxon-specific clumped isotope reordering model yield typical temperatures of 25-30°C for the Carboniferous, and 35-40°C for the Ordovician-Silurian. Inserting clumped temperatures and

Complex Homology and the Evolution of Nervous Systems

PubMed Central

Liebeskind, Benjamin J.; Hillis, David M.; Zakon, Harold H.; Hofmann, Hans A.

2016-01-01

We examine the complex evolution of animal nervous systems and discuss the ramifications of this complexity for inferring the nature of early animals. Although reconstructing the origins of nervous systems remains a central challenge in biology, and the phenotypic complexity of early animals remains controversial, a compelling picture is emerging. We now know that the nervous system and other key animal innovations contain a large degree of homoplasy, at least on the molecular level. Conflicting hypotheses about early nervous system evolution are due primarily to differences in the interpretation of this homoplasy. We highlight the need for explicit discussion of assumptions and discuss the limitations of current approaches for inferring ancient phenotypic states. PMID:26746806

A Large Catalog of Multiwavelength GRB Afterglows. I. Color Evolution and Its Physical Implication

NASA Astrophysics Data System (ADS)

Li, Liang; Wang, Yu; Shao, Lang; Wu, Xue-Feng; Huang, Yong-Feng; Zhang, Bing; Ryde, Felix; Yu, Hoi-Fung

2018-02-01

The spectrum of gamma-ray burst (GRB) afterglows can be studied with color indices. Here, we present a large comprehensive catalog of 70 GRBs with multiwavelength optical transient data on which we perform a systematic study to find the temporal evolution of color indices. We categorize them into two samples based on how well the color indices are evaluated. The Golden sample includes 25 bursts mostly observed by GROND, and the Silver sample includes 45 bursts observed by other telescopes. For the Golden sample, we find that 96% of the color indices do not vary over time. However, the color indices do vary during short periods in most bursts. The observed variations are consistent with effects of (i) the cooling frequency crossing the studied energy bands in a wind medium (43%) and in a constant-density medium (30%), (ii) early dust extinction (12%), (iii) transition from reverse-shock to forward-shock emission (5%), or (iv) an emergent SN emission (10%). We also study the evolutionary properties of the mean color indices for different emission episodes. We find that 86% of the color indices in the 70 bursts show constancy between consecutive ones. The color index variations occur mainly during the late GRB–SN bump, the flare, and early reverse-shock emission components. We further perform a statistical analysis of various observational properties and model parameters (spectral index {β }o{CI}, electron spectral indices p CI, etc.) using color indices. Overall, we conclude that ∼90% of colors are constant in time and can be accounted for by the simplest external forward-shock model, while the varying color indices call for more detailed modeling.

High-speed spectral nanocytology for early cancer screening

PubMed Central

Subramanian, Hariharan; Maneval, Charles D.; White, Craig A.; Levenson, Richard M.; Backman, Vadim

2013-01-01

Abstract. High-throughput partial wave spectroscopy (HTPWS) is introduced as a high-speed spectral nanocytology technique that utilizes the field effect of carcinogenesis to perform minimally invasive cancer screening on at-risk populations. HTPWS uses fully automated hardware and an acousto-optic tunable filter to scan slides at low magnification, to select cells, and to rapidly acquire spectra at each spatial pixel in a cell between 450 and 700 nm, completing measurements of 30 cells in 40 min. Statistical quantitative analysis on the size and density of intracellular nanostructures extracted from the spectra at each pixel in a cell yields the diagnostic biomarker, disorder strength (Ld). Linear correlation between Ld and the length scale of nanostructures was measured in phantoms with R2=0.93. Diagnostic sensitivity was demonstrated by measuring significantly higher Ld from a human colon cancer cell line (HT29 control vector) than a less aggressive variant (epidermal growth factor receptor knockdown). Clinical diagnostic performance for lung cancer screening was tested on 23 patients, yielding a significant difference in Ld between smokers and cancer patients, p=0.02 and effect size=1.00. The high-throughput performance, nanoscale sensitivity, and diagnostic sensitivity make HTPWS a potentially clinically relevant modality for risk stratification of the large populations at risk of developing cancer. PMID:24193949

[The study of M dwarf spectral classification].

PubMed

Yi, Zhen-Ping; Pan, Jing-Chang; Luo, A-Li

2013-08-01

As the most common stars in the galaxy, M dwarfs can be used to trace the structure and evolution of the Milky Way. Besides, investigating M dwarfs is important for searching for habitability of extrasolar planets orbiting M dwarfs. Spectral classification of M dwarfs is a fundamental work. The authors used DR7 M dwarf sample of SLOAN to extract important features from the range of 600-900 nm by random forest method. Compared to the features used in Hammer Code, the authors added three new indices. Our test showed that the improved Hammer with new indices is more accurate. Our method has been applied to classify M dwarf spectra of LAMOST.

Major transitions in human evolution

PubMed Central

Foley, Robert A.; Martin, Lawrence; Mirazón Lahr, Marta; Stringer, Chris

2016-01-01

Evolutionary problems are often considered in terms of ‘origins', and research in human evolution seen as a search for human origins. However, evolution, including human evolution, is a process of transitions from one state to another, and so questions are best put in terms of understanding the nature of those transitions. This paper discusses how the contributions to the themed issue ‘Major transitions in human evolution’ throw light on the pattern of change in hominin evolution. Four questions are addressed: (1) Is there a major divide between early (australopithecine) and later (Homo) evolution? (2) Does the pattern of change fit a model of short transformations, or gradual evolution? (3) Why is the role of Africa so prominent? (4) How are different aspects of adaptation—genes, phenotypes and behaviour—integrated across the transitions? The importance of developing technologies and approaches and the enduring role of fieldwork are emphasized. This article is part of the themed issue ‘Major transitions in human evolution’. PMID:27298461

High-speed spectral infrared imaging of spark ignition engine combustion. (Reannouncement with new availability information)

DOE Office of Scientific and Technical Information (OSTI.GOV)

McComiskey, T.; Jiang, H.; Qian, Y.

1993-03-05

In-cylinder flame propagation and its impact on thermal characteristics of the combustion chamber were studied by using a new high-speed spectral infrared imaging system. In this work, successive spectral IR images of combustion chamber events were captured while varying several parameters, including fuel/air, spark timing, speed, and warming-up period. Some investigation of cyclic variation, knock, and high-temperature components during the non-combustion period was also conducted. It was found that the spectral images obtained in both short and long wavelength bands exhibited unique pieces of in-cylinder information, i.e., (qualitative) distributions of temperature and combustion products, respectively. During the combustion period, themore » temperature of early-formed combustion products continued to increase while the flame front temperature, e.g. near the end gas zone, remained relatively low. The exhaust valve emitted strong radiation starting from the early stage of the combustion period. The spark plug emitted the strongest radiation during the non-combustion period. Considerable cyclic variation in growth of the flame front and completion of the reaction was observable. The radiation from both spectral bands became stronger as the engine warm-up period in While operating the engine with the addition of n-heptane in the intake to produce knock, we captured spectral IR images of the end gas right before it was abruptly consumed. The combustion products that were formed in the end-gas volume upon knock, showed no evidence of higher temperature than other zones in the combustion chamber.... Spectral infrared imaging, High-speed, Digital data, Instantaneous distribution, Spark ignition combustion.« less

Mathematics in Early Childhood Education: Revolution or Evolution?