NASA Astrophysics Data System (ADS)
Siebicke, Lukas
2017-04-01
The eddy covariance (EC) method is state-of-the-art in directly measuring vegetation-atmosphere exchange of CO2 and H2O at ecosystem scale. However, the EC method is currently limited to a small number of atmospheric tracers by the lack of suitable fast-response analyzers or poor signal-to-noise ratios. High resource and power demands may further restrict the number of spatial sampling points. True eddy accumulation (TEA) is an alternative method for direct and continuous flux observations. Key advantages are the applicability to a wider range of air constituents such as greenhouse gases, isotopes, volatile organic compounds and aerosols using slow-response analyzers. In contrast to relaxed eddy accumulation (REA), true eddy accumulation (Desjardins, 1977) has the advantage of being a direct method which does not require proxies. True Eddy Accumulation has the potential to overcome above mentioned limitations of eddy covariance but has hardly ever been successfully demonstrated in practice in the past. This study presents flux measurements using an innovative approach to true eddy accumulation by directly, continuously and automatically measuring trace gas fluxes using a flow-through system. We merge high-frequency flux contributions from TEA with low-frequency covariances from the same sensors. We show flux measurements of CO2, CH4 and H2O by TEA and EC above an old-growth forest at the ICOS flux tower site "Hainich" (DE-Hai). We compare and evaluate the performance of the two direct turbulent flux measurement methods eddy covariance and true eddy accumulation using side-by-side trace gas flux observations. We further compare performance of seven instrument complexes, i.e. combinations of sonic anemometers and trace gas analyzers. We compare gas analyzers types of open-path, enclosed-path and closed-path design. We further differentiate data from two gas analysis technologies: infrared gas analysis (IRGA) and laser spectrometry (open path and CRDS closed-path laser spectrometers). We present results of CO2 and H2O fluxes from the following six instruments, i.e. combinations of sonic anemometers/gas analyzers (and methods): METEK-uSonic3/Picarro-G2301 (TEA), METEK-uSonic3/LI-7500 (EC), Gill-R3/LI-6262 (EC), Gill-R3/LI-7200 (EC), Gill-HS/LI-7200 (EC), Gill-R3/LGR-FGGA (EC). Further, we present results of much more difficult to measure CH4 fluxes from the following three instruments, i.e. combinations of sonic anemometers/gas analyzers (and methods): METEK-uSonic3/Picarro-G2301 (TEA), Gill-R3/LI-7700 (EC), Gill-R3/LGR-FGGA (EC). We observed that CO2, CH4 and H2O fluxes from the side-by-side measurements by true eddy accumulation and eddy covariance methods correlated well. Secondly, the difference between the TEA and EC methods using the same sonic anemometer but different gas analyzer was often smaller than the mismatch of the various side-by-side eddy covariance measurements using different sonic anemometers and gas analyzers. Signal-to-noise ratios of CH4 fluxes from the true eddy accumulation system system were superior to both eddy covariance sensors (open-path LI-7700 and closed-path CRDS LGR-FGGA sensors). We conclude that our novel implementation of the true eddy accumulation method demonstrated high signal-to-noise ratios, applicability to slow-response gas analyzers, small power consumption and direct proxy-free ecosystem-scale trace gas flux measurements of CO2, CH4 and H2O. The current results suggest that true eddy accumulation would be suitable and should be applied as the method-of-choice for direct flux measurements of a large number of atmospheric constituents beyond CO2 and H2O, including isotopes, aerosols, volatile organic compounds and other trace gases for which eddy covariance might not be a viable alternative. We will further develop true eddy accumulation as a novel approach using multiplexed systems for spatially distributed flux measurements.
Detection of Anomalous Machining Damages in Inconel 718 and TI 6-4 by Eddy Current Techniques
NASA Astrophysics Data System (ADS)
Lo, C. C. H.; Shimon, M.; Nakagawa, N.
2010-02-01
This paper reports on an eddy current (EC) study aimed at detecting anomalous machining damages in Inconel 718 and Ti 6-4 samples, including (i) surface discontinuities such as re-depositing of chips onto the machined surface, and (ii) microstructural damages manifested as a white surface layer and a subsurface layer of distorted grains, typically tens of microns thick. A series of pristine and machine-damaged coupons were studied by EC scans using a differential probe operated at 2 MHz to detect discontinuous surface anomalies, and by swept high frequency EC (SHFEC) measurements from 0.5 MHz to 65.5 MHz using proprietary detection coils to detect surface microstructural damages. In general, the EC c-scan data from machine-damaged surfaces show spatial variations with larger standard deviations than those from the undamaged surfaces. In some cases, the c-scan images exhibit characteristic bipolar indications in good spatial correlation with surface anomalies revealed by optical microscopy and laser profilometry. Results of the SHFEC measurements indicate a reduced near-surface conductivity of the damaged surfaces compared to the undamaged surfaces.
Aquatic Eddy Correlation: Quantifying the Artificial Flux Caused by Stirring-Sensitive O2 Sensors
Holtappels, Moritz; Noss, Christian; Hancke, Kasper; Cathalot, Cecile; McGinnis, Daniel F.; Lorke, Andreas; Glud, Ronnie N.
2015-01-01
In the last decade, the aquatic eddy correlation (EC) technique has proven to be a powerful approach for non-invasive measurements of oxygen fluxes across the sediment water interface. Fundamental to the EC approach is the correlation of turbulent velocity and oxygen concentration fluctuations measured with high frequencies in the same sampling volume. Oxygen concentrations are commonly measured with fast responding electrochemical microsensors. However, due to their own oxygen consumption, electrochemical microsensors are sensitive to changes of the diffusive boundary layer surrounding the probe and thus to changes in the ambient flow velocity. The so-called stirring sensitivity of microsensors constitutes an inherent correlation of flow velocity and oxygen sensing and thus an artificial flux which can confound the benthic flux determination. To assess the artificial flux we measured the correlation between the turbulent flow velocity and the signal of oxygen microsensors in a sealed annular flume without any oxygen sinks and sources. Experiments revealed significant correlations, even for sensors designed to have low stirring sensitivities of ~0.7%. The artificial fluxes depended on ambient flow conditions and, counter intuitively, increased at higher velocities because of the nonlinear contribution of turbulent velocity fluctuations. The measured artificial fluxes ranged from 2 - 70 mmol m-2 d-1 for weak and very strong turbulent flow, respectively. Further, the stirring sensitivity depended on the sensor orientation towards the flow. For a sensor orientation typically used in field studies, the artificial flux could be predicted using a simplified mathematical model. Optical microsensors (optodes) that should not exhibit a stirring sensitivity were tested in parallel and did not show any significant correlation between O2 signals and turbulent flow. In conclusion, EC data obtained with electrochemical sensors can be affected by artificial flux and we recommend using optical microsensors in future EC-studies. PMID:25635679
Static Vented Chamber and Eddy Covariance Methane Flux Comparisons in Mid-South US Rice
NASA Astrophysics Data System (ADS)
Reba, M. L.; Fong, B.; Adviento-Borbe, A.; Runkle, B.; Suvocarev, K.; Rival, I.
2017-12-01
Rice cultivation contributes higher amounts of GHG emissions (CO2 and CH4) due to flooded field conditions. A comparison between eddy covariance and static vented flux chamber measurement techniques is presented. Rice GHG emissions originating from plot level chambers may not accurately describe the aggregate effects of all the soil and micrometeorological variations across a production field. Eddy covariance (EC) is a direct, integrated field measurement of field scale trace gases. Flux measurements were collected in NE Arkansas production size rice fields (16 ha, 40 ac) during the 2015 and 2016 production seasons (June-August) in continuous flood (CF) irrigation. The study objectives included quantifying the difference between chamber and EC measurements, and categorizing flux behavior to growth stage and field history. EC daily average emissions correlated with chamber measurements (R2=0.27-0.54) more than average from 09:00-12:00 which encompassed chamber measurement times (R2=0.23-0.32). Maximum methane emissions occurred in the late afternoon from 14:00-18:00 which corresponded with maximum soil heat flux and air temperature. The total emissions from the study fields ranged from 27-117 kg CH4-C ha-1 season-1. The emission profile was lower in 2015, most likely due to higher rainfall and cooler temperatures during the growing season compared to 2016. These findings improve our understanding of GHG emissions at the field scale under typical production practices and validity of chamber and EC flux measurement techniques.
NASA Astrophysics Data System (ADS)
Donis, D.; Janssen, F.; Böttcher, M.; McGinnis, D.; Holtappels, M.; Wenzhöfer, F.
2012-04-01
Measurements of solute exchange across the sediment-water interface are crucial for marine environment monitoring. This interface has fundamental filter functions for the mass exchange between the seafloor and the water column. Being a non-invasive technique, the eddy correlation method, is probably the most accurate measurement for benthic fluxes. It does not interfere with local hydrodynamics and integrates over large areas, showing considerable advantages compared to traditional methods, i.e., microprofiles and benthic chambers. One of the most important exchange processes across the sediment-water interface is flux of oxygen, which is a predominant control factor for the biogeochemical activity in the sediment, carbon processing and the composition of benthic communities. The eddy correlation method performs simultaneous recordings of vertical velocities and oxygen concentrations at a specific distance to the seafloor and is becoming a standard method for resolving dissolved oxygen fluxes in aquatic systems. However, data treatment and interpretation, especially in shallow environments, is still challenging. One major concern in eddy correlation studies of coastal environments is how to consider surface wave motions that can dominate the turbulence range and that may bias flux calculations. A critical part of the data treatment thus is the removal of wave biases from the vertical velocity component, by separating the wave frequency oscillations (due to a tilted or miss-aligned sensor) from those containing meaningful flux contributions. Here we present in situ benthic oxygen exchange rates as determined by an eddy correlation system (ECS) and simultaneously deployed stirred benthic chambers. The study was carried out in a coastal ecosystem of the southern Baltic Sea that was impacted by low salinity groundwater discharge (Hel peninsula, Poland). Oxygen fluxes determined with ECS compared well with results from benthic chambers. Flux data and seepage rates are discussed in the context of groundwater and their importance for benthic biogeochemical processes in shallow sandy sediments. This work was supported by 7th framework EU ITN-project SENSEnet and BONUS+ project AMBER.
Using eddy covariance to measure the dependence of air-sea CO2 exchange rate on friction velocity
NASA Astrophysics Data System (ADS)
Landwehr, Sebastian; Miller, Scott D.; Smith, Murray J.; Bell, Thomas G.; Saltzman, Eric S.; Ward, Brian
2018-03-01
Parameterisation of the air-sea gas transfer velocity of CO2 and other trace gases under open-ocean conditions has been a focus of air-sea interaction research and is required for accurately determining ocean carbon uptake. Ships are the most widely used platform for air-sea flux measurements but the quality of the data can be compromised by airflow distortion and sensor cross-sensitivity effects. Recent improvements in the understanding of these effects have led to enhanced corrections to the shipboard eddy covariance (EC) measurements.Here, we present a revised analysis of eddy covariance measurements of air-sea CO2 and momentum fluxes from the Southern Ocean Surface Ocean Aerosol Production (SOAP) study. We show that it is possible to significantly reduce the scatter in the EC data and achieve consistency between measurements taken on station and with the ship underway. The gas transfer velocities from the EC measurements correlate better with the EC friction velocity (u*) than with mean wind speeds derived from shipboard measurements corrected with an airflow distortion model. For the observed range of wind speeds (u10 N = 3-23 m s-1), the transfer velocities can be parameterised with a linear fit to u*. The SOAP data are compared to previous gas transfer parameterisations using u10 N computed from the EC friction velocity with the drag coefficient from the Coupled Ocean-Atmosphere Response Experiment (COARE) model version 3.5. The SOAP results are consistent with previous gas transfer studies, but at high wind speeds they do not support the sharp increase in gas transfer associated with bubble-mediated transfer predicted by physically based models.
A True Eddy Accumulation - Eddy Covariance hybrid for measurements of turbulent trace gas fluxes
NASA Astrophysics Data System (ADS)
Siebicke, Lukas
2016-04-01
Eddy covariance (EC) is state-of-the-art in directly and continuously measuring turbulent fluxes of carbon dioxide and water vapor. However, low signal-to-noise ratios, high flow rates and missing or complex gas analyzers limit it's application to few scalars. True eddy accumulation, based on conditional sampling ideas by Desjardins in 1972, requires no fast response analyzers and is therefore potentially applicable to a wider range of scalars. Recently we showed possibly the first successful implementation of True Eddy Accumulation (TEA) measuring net ecosystem exchange of carbon dioxide of a grassland. However, most accumulation systems share the complexity of having to store discrete air samples in physical containers representing entire flux averaging intervals. The current study investigates merging principles of eddy accumulation and eddy covariance, which we here refer to as "true eddy accumulation in transient mode" (TEA-TM). This direct flux method TEA-TM combines true eddy accumulation with continuous sampling. The TEA-TM setup is simpler than discrete accumulation methods while avoiding the need for fast response gas analyzers and high flow rates required for EC. We implemented the proposed TEA-TM method and measured fluxes of carbon dioxide (CO2), methane (CH4) and water vapor (H2O) above a mixed beech forest at the Hainich Fluxnet and ICOS site, Germany, using a G2301 laser spectrometer (Picarro Inc., USA). We further simulated a TEA-TM sampling system using measured high frequency CO2 time series from an open-path gas analyzer. We operated TEA-TM side-by-side with open-, enclosed- and closed-path EC flux systems for CO2, H2O and CH4 (LI-7500, LI-7200, LI-6262, LI-7700, Licor, USA, and FGGA LGR, USA). First results show that TEA-TM CO2 fluxes were similar to EC fluxes. Remaining differences were similar to those between the three eddy covariance setups (open-, enclosed- and closed-path gas analyzers). Measured TEA-TM CO2 fluxes from our physical sampling system closely reproduced dynamics of simulated TEA-TM fluxes. In conclusion this study introduces a new approach to trace gas flux measurements using transient-mode true eddy accumulation. First TEA-TM CO2 fluxes compared favorably with side-by-side EC fluxes, in agreement with our previous experiments comparing discrete TEA to EC. True eddy accumulation has thus potential for measuring turbulent fluxes of a range of atmospheric tracers using slow response analyzers.
NASA Astrophysics Data System (ADS)
Metzger, Stefan; Durden, David; Sturtevant, Cove; Luo, Hongyan; Pingintha-Durden, Natchaya; Sachs, Torsten; Serafimovich, Andrei; Hartmann, Jörg; Li, Jiahong; Xu, Ke; Desai, Ankur R.
2017-08-01
Large differences in instrumentation, site setup, data format, and operating system stymie the adoption of a universal computational environment for processing and analyzing eddy-covariance (EC) data. This results in limited software applicability and extensibility in addition to often substantial inconsistencies in flux estimates. Addressing these concerns, this paper presents the systematic development of portable, reproducible, and extensible EC software achieved by adopting a development and systems operation (DevOps) approach. This software development model is used for the creation of the eddy4R family of EC code packages in the open-source R language for statistical computing. These packages are community developed, iterated via the Git distributed version control system, and wrapped into a portable and reproducible Docker filesystem that is independent of the underlying host operating system. The HDF5 hierarchical data format then provides a streamlined mechanism for highly compressed and fully self-documented data ingest and output. The usefulness of the DevOps approach was evaluated for three test applications. First, the resultant EC processing software was used to analyze standard flux tower data from the first EC instruments installed at a National Ecological Observatory (NEON) field site. Second, through an aircraft test application, we demonstrate the modular extensibility of eddy4R to analyze EC data from other platforms. Third, an intercomparison with commercial-grade software showed excellent agreement (R2 = 1.0 for CO2 flux). In conjunction with this study, a Docker image containing the first two eddy4R packages and an executable example workflow, as well as first NEON EC data products are released publicly. We conclude by describing the work remaining to arrive at the automated generation of science-grade EC fluxes and benefits to the science community at large. This software development model is applicable beyond EC and more generally builds the capacity to deploy complex algorithms developed by scientists in an efficient and scalable manner. In addition, modularity permits meeting project milestones while retaining extensibility with time.
Determining the oxygen isotope composition of evapotranspiration with eddy covariance
USDA-ARS?s Scientific Manuscript database
The oxygen isotope componsition of evapotranspiration (dF) represents an important tracer in the study of biosphere-atmosphere interactions, hydrology, paleoclimate, and carbon cycling. Here we demonstrate direct measurement of dF based on eddy covariance (EC) and tunable diode laser (EC-TDL) techni...
Electromagnetic nondestructive evaluation of tempering process in AISI D2 tool steel
NASA Astrophysics Data System (ADS)
Kahrobaee, Saeed; Kashefi, Mehrdad
2015-05-01
The present paper investigates the potential of using eddy current technique as a reliable nondestructive tool to detect microstructural changes during the different stages of tempering treatment in AISI D2 tool steel. Five stages occur in tempering of the steel: precipitation of ɛ carbides, formation of cementite, retained austenite decomposition, secondary hardening effect and spheroidization of carbides. These stages were characterized by destructive methods, including dilatometry, differential scanning calorimetry, X-ray diffraction, scanning electron microscopic observations, and hardness measurements. The microstructural changes alter the electrical resistivity/magnetic saturation, which, in turn, influence the eddy current signals. Two EC parameters, induced voltage sensed by pickup coil and impedance point detected by excitation coil, were evaluated as a function of tempering temperature to characterize the microstructural features, nondestructively. The study revealed that a good correlation exists between the EC parameters and the microstructural changes.
USDA-ARS?s Scientific Manuscript database
Eddy covariance (EC) is a well-established, non-intrusive observational technique that has long been used to measure the net carbon balance of numerous ecosystems including crop lands for perennial crops such as orchards and vineyards, and pasturelands. While EC measures net carbon fluxes well, it ...
Eddy covariance measurements of methane fluxes over grazed native and improved prairies in Oklahoma
USDA-ARS?s Scientific Manuscript database
Although several studies have reported eddy covariance (EC) measurements at several tallgrass prairie sites to investigate the dynamics of carbon and water vapor fluxes, the EC measurements of methane (CH4) fluxes over grazed tallgrass prairie sites are lacking. CH4 fluxes were measured during the 2...
Data Sharing and Scientific Impact in Eddy Covariance Research
DOE Office of Scientific and Technical Information (OSTI.GOV)
Bond-Lamberty, B.
Do the benefits of data sharing outweigh its perceived costs? This is a critical question, and one with the potential to change culture and behavior. Dai et al. (2018) examine how data sharing is related to scientific impact in the field of eddy covariance (EC), and find that data sharers are disproportionately high-impact researchers, and vice versa; they also note strong regional differences in EC data sharing norms. The current policies and restrictions of EC journals and repositories are highly uneven. Incentivizing data sharing and enhancing computational reproducibility are critical next steps for EC, ecology, and science more broadly.
NASA Astrophysics Data System (ADS)
Lu, Zheng; Huang, Biao; Zhang, Qi; Lu, Xilin
2018-05-01
Eddy-current tuned mass dampers (EC-TMDs) are non-contacting passive control devices and are developed on the basis of conventional tuned mass dampers. They comprise a solid mass, a stiffness element, and a damping element, wherein the damping mechanism originates from eddy currents. By relative motion between a non-magnetic conductive metal and a permanent magnet in a dynamic system, a time-varying magnetic field is induced in the conductor, thereby generating eddy currents. The eddy currents induce a magnetic field with opposite polarity, causing repulsive forces, i.e., damping forces. This technology can overcome the drawbacks of conventional tuned mass dampers, such as limited service life, deterioration of mechanical properties, and undesired additional stiffness. The experimental and analytical study of this system installed on a multi-degree-of-freedom structure is presented in this paper. A series of shaking table tests were conducted on a five-story steel-frame model with/without an EC-TMD to evaluate the effectiveness and performance of the EC-TMD in suppressing the vibration of the model under seismic excitations. The experimental results show that the EC-TMD can effectively reduce the displacement response, acceleration response, interstory drift ratio, and maximum strain of the columns under different earthquake excitations. Moreover, an analytical method was proposed on the basis of electromagnetic and structural dynamic theories. A comparison between the test and simulation results shows that the simulation method can be used to estimate the response of structures with an EC-TMD under earthquake excitations with acceptable accuracy.
Adam Wolf; Nick Saliendra; Kanat Akshalov; Douglas A. Johnson; Emilio Laca
2008-01-01
Eddy covariance (EC) and modified Bowen ratio (MBR) systems have been shown to yield subtly different estimates of sensible heat (H), latent heat (LE), and CO2 fluxes (Fc). Our study analyzed the discrepancies between these two systems by first considering the role of the data processing algorithm used to estimate fluxes using EC and later...
Campioli, M; Malhi, Y; Vicca, S; Luyssaert, S; Papale, D; Peñuelas, J; Reichstein, M; Migliavacca, M; Arain, M A; Janssens, I A
2016-12-14
The eddy-covariance (EC) micro-meteorological technique and the ecology-based biometric methods (BM) are the primary methodologies to quantify CO 2 exchange between terrestrial ecosystems and the atmosphere (net ecosystem production, NEP) and its two components, ecosystem respiration and gross primary production. Here we show that EC and BM provide different estimates of NEP, but comparable ecosystem respiration and gross primary production for forest ecosystems globally. Discrepancies between methods are not related to environmental or stand variables, but are consistently more pronounced for boreal forests where carbon fluxes are smaller. BM estimates are prone to underestimation of net primary production and overestimation of leaf respiration. EC biases are not apparent across sites, suggesting the effectiveness of standard post-processing procedures. Our results increase confidence in EC, show in which conditions EC and BM estimates can be integrated, and which methodological aspects can improve the convergence between EC and BM.
NASA Astrophysics Data System (ADS)
Campioli, M.; Malhi, Y.; Vicca, S.; Luyssaert, S.; Papale, D.; Peñuelas, J.; Reichstein, M.; Migliavacca, M.; Arain, M. A.; Janssens, I. A.
2016-12-01
The eddy-covariance (EC) micro-meteorological technique and the ecology-based biometric methods (BM) are the primary methodologies to quantify CO2 exchange between terrestrial ecosystems and the atmosphere (net ecosystem production, NEP) and its two components, ecosystem respiration and gross primary production. Here we show that EC and BM provide different estimates of NEP, but comparable ecosystem respiration and gross primary production for forest ecosystems globally. Discrepancies between methods are not related to environmental or stand variables, but are consistently more pronounced for boreal forests where carbon fluxes are smaller. BM estimates are prone to underestimation of net primary production and overestimation of leaf respiration. EC biases are not apparent across sites, suggesting the effectiveness of standard post-processing procedures. Our results increase confidence in EC, show in which conditions EC and BM estimates can be integrated, and which methodological aspects can improve the convergence between EC and BM.
Campioli, M.; Malhi, Y.; Vicca, S.; Luyssaert, S.; Papale, D.; Peñuelas, J.; Reichstein, M.; Migliavacca, M.; Arain, M. A.; Janssens, I. A.
2016-01-01
The eddy-covariance (EC) micro-meteorological technique and the ecology-based biometric methods (BM) are the primary methodologies to quantify CO2 exchange between terrestrial ecosystems and the atmosphere (net ecosystem production, NEP) and its two components, ecosystem respiration and gross primary production. Here we show that EC and BM provide different estimates of NEP, but comparable ecosystem respiration and gross primary production for forest ecosystems globally. Discrepancies between methods are not related to environmental or stand variables, but are consistently more pronounced for boreal forests where carbon fluxes are smaller. BM estimates are prone to underestimation of net primary production and overestimation of leaf respiration. EC biases are not apparent across sites, suggesting the effectiveness of standard post-processing procedures. Our results increase confidence in EC, show in which conditions EC and BM estimates can be integrated, and which methodological aspects can improve the convergence between EC and BM. PMID:27966534
Soil Respiration in Eddy Covariance Footprints: A Critical Look at Researcher Needs
NASA Astrophysics Data System (ADS)
Gabriel, Carrie-Ellen; Nickerson, Nick; Creelman, Chance
2017-04-01
Eddy covariance (EC) systems have been widely used across the globe for more than 20 years, offering researchers invaluable measurements of parameters including Net Ecosystem Exchange and ecosystem respiration. However, recent research suggests that EC assumptions and technical obstacles may cause biased gas exchange estimates. Measurements of soil respiration (RS) at the ground level may help alleviate these biases; for example, by allowing researchers to reconcile nocturnal EC flux data with soil respiration or by providing a means to inform gap-filling models. RS measurements have been used sparingly alongside EC towers because of the large cost required to scale chamber systems to the EC footprint, as well as data integration and processing burdens. Here we present how the Forced Diffusion (FD) method is ideal for the measurement of RS at EC sites. The FD method allows for inexpensive and autonomous measurements, providing a scalable approach to matching the EC footprint compared to other RS systems. Here, we briefly present the methodology and results from a pilot study at the Howland Forest AmeriFlux site (Maine), carried out during the summer and fall of 2016, measuring soil respiration using the FD chamber technique. The emphasis of the remainder of the research is on gathering, interpreting and actualizing feedback from soil scientists and eddy covariance researchers and technicians on aspects of the FD methodology, deployment style, integration with existing infrastructure and data quality. Our goal is to eventually provide a framework for "ideal soil respiration measurements" that can be used by researchers, engineers and companies to develop functional and reliable soil respiration data sets that are easily coupled with data measured by EC users, and larger EC networks such as AmeriFlux and EuroFlux.
Evaluation of eddy current and magnetic techniques for inspecting rebars in bridge barrier rails
NASA Astrophysics Data System (ADS)
Lo, C. C. H.; Nakagawa, N.
2013-01-01
This paper reports on a feasibility study of using eddy current (EC) and magnetic flux leakage (MFL) methods to detect corrosion damage in rebars that anchor concrete barrier rails to the road deck of bridge structures. EC and MFL measurements were carried out on standalone rebars with and without artificial defects of 25% and 50% material loss, using a commercial EC-based rebar locator and a MFL system that was developed using giant magnetoresistance sensors to detect leakage fluxes from the defects. Both techniques can readily detect the defects at a distance of 2.5″ (63.5 mm). The amplitudes of the EC and MFL signals vary monotonically with the amount of material loss, indicating the potential of using the techniques to quantify material loss of standalone rebars.
NASA Astrophysics Data System (ADS)
Tao, L.; Pan, D.; Gelfand, I.; Abraha, M.; Moyer, R.; Poe, A.; Sun, K.; Robertson, P.; Zondlo, M. A.
2015-12-01
Nitrous oxide (N2O) is important greenhouse and ozone-depleting gase. Although many efforts have been paid to N2O emissions, the spatial and temporal variability of N2O emissions still subject to large uncertainty. Application of the eddy covariance method for N2O emissions research would allow continuous ecosystem level flux measurements. The caveat, however, is need for high precision and high frequency measurements in field. In this study, an open-path, quantum cascade-laser-based eddy covariance N2O sensor has been deployed nearly continuously since May 2015 over a corn field at the W.K. Kellogg Biological Station site in SW Michigan. The field precision of the N2O sensor was assessed to be 0.1 ppbv at 10 Hz, and the total consumption was ~ 40 W, allowing the system to be powered solely by solar panels. The stability of the sensor under different temperature and humidity was tested within an environmental chamber. Spectroscopic experiments and cospectra analyses were carried out to study specific corrections associated with the sensor for eddy covariance techniques, including the line broadening effect due to water vapor and high frequency flux attenuation owning to sample path averaging. Ogive analyses indicated that the high-frequency N2O flux loss due to various damping effects was comparable to those of the CO2 flux. The detection limit of flux was estimated to be 0.3 ng N s-1 m-2 with a flux averaging interval of 30 minutes. The results from the EC system were also compared with ground measurements by standard static chambers (SC). Overall, more than 150 individual chamber measurements were taken within the footprint of the EC system. We found good correlation between the EC and SC methods given the spatiotemporal differences between the two techniques (R2 = 0.75). Both methods detected increased emissions during afternoon as compared to morning and night hours. Differences between EC and SC were also studied by investigating spatial variability with a footprint model. Our results indicate diurnality of ecosystem level N2O emissions may have important consequences for both field and global scale budgets and highlight the need of more continuous measurements for future investigation.
Determining confounding sensitivities in eddy current thin film measurements
NASA Astrophysics Data System (ADS)
Gros, Ethan; Udpa, Lalita; Smith, James A.; Wachs, Katelyn
2017-02-01
Eddy current (EC) techniques are widely used in industry to measure the thickness of non-conductive films on a metal substrate. This is done by using a system whereby a coil carrying a high-frequency alternating current is used to create an alternating magnetic field at the surface of the instrument's probe. When the probe is brought near a conductive surface, the alternating magnetic field will induce ECs in the conductor. The substrate characteristics and the distance of the probe from the substrate (the coating thickness) affect the magnitude of the ECs. The induced currents load the probe coil affecting the terminal impedance of the coil. The measured probe impedance is related to the lift off between coil and conductor as well as conductivity of the test sample. For a known conductivity sample, the probe impedance can be converted into an equivalent film thickness value. The EC measurement can be confounded by a number of measurement parameters. It was the goal of this research to determine which physical properties of the measurement set-up and sample can adversely affect the thickness measurement. The eddy-current testing was performed using a commercially available, hand-held eddy-current probe (ETA3.3H spring-loaded eddy probe running at 8 MHz) that comes with a stand to hold the probe. The stand holds the probe and adjusts the probe on the z-axis to help position the probe in the correct area as well as make precise measurements. The signal from the probe was sent to a hand-held readout, where the results are recorded directly in terms of liftoff or film thickness. Understanding the effect of certain factors on the measurements of film thickness, will help to evaluate how accurate the ETA3.3H spring-loaded eddy probe was at measuring film thickness under varying experimental conditions. This research studied the effects of a number of factors such as i) conductivity, ii) edge effect, iii) surface finish of base material and iv) cable condition.
NASA Astrophysics Data System (ADS)
Anderson, Ray; Skaggs, Todd; Alfieri, Joseph; Kustas, William; Wang, Dong; Ayars, James
2016-04-01
Partitioned land surfaces fluxes (e.g. evaporation, transpiration, photosynthesis, and ecosystem respiration) are needed as input, calibration, and validation data for numerous hydrological and land surface models. However, one of the most commonly used techniques for measuring land surface fluxes, Eddy Covariance (EC), can directly measure net, combined water and carbon fluxes (evapotranspiration and net ecosystem exchange/productivity). Analysis of the correlation structure of high frequency EC time series (hereafter flux partitioning or FP) has been proposed to directly partition net EC fluxes into their constituent components using leaf-level water use efficiency (WUE) data to separate stomatal and non-stomatal transport processes. FP has significant logistical and spatial representativeness advantages over other partitioning approaches (e.g. isotopic fluxes, sap flow, microlysimeters), but the performance of the FP algorithm is reliant on the accuracy of the intercellular CO2 (ci) concentration used to parameterize WUE for each flux averaging interval. In this study, we tested several parameterizations for ci as a function of atmospheric CO2 (ca), including (1) a constant ci/ca ratio for C3 and C4 photosynthetic pathway plants, (2) species-specific ci/ca-Vapor Pressure Deficit (VPD) relationships (quadratic and linear), and (3) generalized C3 and C4 photosynthetic pathway ci/ca-VPD relationships. We tested these ci parameterizations at three agricultural EC towers from 2011-present in C4 and C3 crops (sugarcane - Saccharum officinarum L. and peach - Prunus persica), and validated again sap-flow sensors installed at the peach site. The peach results show that the species-specific parameterizations driven FP algorithm came to convergence significantly more frequently (~20% more frequently) than the constant ci/ca ratio or generic C3-VPD relationship. The FP algorithm parameterizations with a generic VPD relationship also had slightly higher transpiration (5 Wm-2 difference) than the constant ci/ca ratio. However, photosynthesis and respiration fluxes over sugarcane were ~15% lower with a VPD-ci/ca relationship than a constant ci/ca ratio. The results illustrate the importance of combining leaf-level physiological observations with EC to improve the performance of the FP algorithm.
NASA Astrophysics Data System (ADS)
Mbabazi, D.; Mohanty, B.; Gaur, N.
2017-12-01
Evapotranspiration (ET) is an important component of the water and energy balance and accounts for 60 -70% of precipitation losses. However, accurate estimates of ET are difficult to quantify at varying spatial and temporal scales. Eddy covariance methods estimate ET at high temporal resolutions but without capturing the spatial variation in ET within its footprint. On the other hand, remote sensing methods using Landsat imagery provide ET with high spatial resolution but low temporal resolution (16 days). In this study, we used both eddy covariance and remote sensing methods to generate high space-time resolution ET. Daily, monthly and seasonal ET estimates were obtained using the eddy covariance (EC) method, Penman-Monteith (PM) and Mapping Evapotranspiration with Internalized Calibration (METRIC) models to determine cotton and native prairie ET dynamics in the Brazos river basin characterized by varying hydro-climatic and geological gradients. Daily estimates of spatially distributed ET (30 m resolution) were generated using spatial autocorrelation and temporal interpolations between the EC flux variable footprints and METRIC ET for the 2016 and 2017 growing seasons. A comparison of the 2016 and 2017 preliminary daily ET estimates showed similar ET dynamics/trends among the EC, PM and METRIC methods, and 5-20% differences in seasonal ET estimates. This study will improve the spatial estimates of EC ET and temporal resolution of satellite derived ET thus providing better ET data for water use management.
NASA Astrophysics Data System (ADS)
Ji, Jinghua; Luo, Jianhua; Lei, Qian; Bian, Fangfang
2017-05-01
This paper proposed an analytical method, based on conformal mapping (CM) method, for the accurate evaluation of magnetic field and eddy current (EC) loss in fault-tolerant permanent-magnet (FTPM) machines. The aim of modulation function, applied in CM method, is to change the open-slot structure into fully closed-slot structure, whose air-gap flux density is easy to calculate analytically. Therefore, with the help of Matlab Schwarz-Christoffel (SC) Toolbox, both the magnetic flux density and EC density of FTPM machine are obtained accurately. Finally, time-stepped transient finite-element method (FEM) is used to verify the theoretical analysis, showing that the proposed method is able to predict the magnetic flux density and EC loss precisely.
Methane Emissions Estimation from a Dairy Farm using Eddy Covariance Measurements
NASA Astrophysics Data System (ADS)
Guo, Q.; Richardson, S.; Sokol, A. B.; Lauvaux, T.; Hristov, A. N.; Hong, B.; Davis, K. J.
2017-12-01
Dairy farms are a significant source of methane emissions. Accurate quantification of these emissions is important for evaluating and ultimately minimizing the impact of agricultural activity on climate change. We have employed the eddy covariance (EC) technique to attempt to quantify total CH4 emissions from a dairy farm, and compare these emissions to inventory estimates. An eddy covariance (EC) sensor was deployed to monitor CH4 emissions at one dairy manure storage facility from July 2016 through the winter of 2017, at a second manure storage facility from April to mid-July 2017, and at dairy barns during July and August of 2017. A flux footprint model was used to convert the observed methane fluxes into estimates of emissions per unit area from these sources. During April and May, CH4 fluxes from the second lagoon were relatively small and slowly increased with daily mean values growing from 0.45 to 10.75 μmol m-2 s-1. June to mid-July fluxes increased rapidly with a peak daily mean emission of 77.97 μmol m-2 s-1. The fluxes were positively correlated with air temperature. Comparison of emissions from the two lagoons, comparison to an inventory estimate of emissions from these lagoons, and evaluation of methane emissions from the barns are underway. These results will be combined to evaluate total farm emissions, and to test our understanding of the factors that govern emissions from dairy operations.
Methane fluxes above the Hainich forest by True Eddy Accumulation and Eddy Covariance
NASA Astrophysics Data System (ADS)
Siebicke, Lukas; Gentsch, Lydia; Knohl, Alexander
2016-04-01
Understanding the role of forests for the global methane cycle requires quantifying vegetation-atmosphere exchange of methane, however observations of turbulent methane fluxes remain scarce. Here we measured turbulent fluxes of methane (CH4) above a beech-dominated old-growth forest in the Hainich National Park, Germany, and validated three different measurement approaches: True Eddy Accumulation (TEA, closed-path laser spectroscopy), and eddy covariance (EC, open-path and closed-path laser spectroscopy, respectively). The Hainich flux tower is a long-term Fluxnet and ICOS site with turbulent fluxes and ecosystem observations spanning more than 15 years. The current study is likely the first application of True Eddy Accumulation (TEA) for the measurement of turbulent exchange of methane and one of the very few studies comparing open-path and closed-path eddy covariance (EC) setups side-by-side. We observed uptake of methane by the forest during the day (a methane sink with a maximum rate of 0.03 μmol m-2 s-1 at noon) and no or small fluxes of methane from the forest to the atmosphere at night (a methane source of typically less than 0.01 μmol m-2 s-1) based on continuous True Eddy Accumulation measurements in September 2015. First results comparing TEA to EC CO2 fluxes suggest that True Eddy Accumulation is a valid option for turbulent flux quantifications using slow response gas analysers (here CRDS laser spectroscopy, other potential techniques include mass spectroscopy). The TEA system was one order of magnitude more energy efficient compared to closed-path eddy covariance. The open-path eddy covariance setup required the least amount of user interaction but is often constrained by low signal-to-noise ratios obtained when measuring methane fluxes over forests. Closed-path eddy covariance showed good signal-to-noise ratios in the lab, however in the field it required significant amounts of user intervention in addition to a high power consumption. We conclude, based on preliminary evidence, that the Hainich forest acted as a moderate net sink for methane during the investigation. This supports earlier findings from chamber measurements at the Hainich forest site and is similar to findings from other forest sites. Our observations will be continued through 2016 and beyond to provide longer-term methane flux time series spanning entire seasons. However, the current data set already provides a basis for further consolidating methods of measurements and analysis of turbulent methane fluxes using eddy covariance and true eddy accumulation.
Eddy current characterization of small cracks using least square support vector machine
NASA Astrophysics Data System (ADS)
Chelabi, M.; Hacib, T.; Le Bihan, Y.; Ikhlef, N.; Boughedda, H.; Mekideche, M. R.
2016-04-01
Eddy current (EC) sensors are used for non-destructive testing since they are able to probe conductive materials. Despite being a conventional technique for defect detection and localization, the main weakness of this technique is that defect characterization, of the exact determination of the shape and dimension, is still a question to be answered. In this work, we demonstrate the capability of small crack sizing using signals acquired from an EC sensor. We report our effort to develop a systematic approach to estimate the size of rectangular and thin defects (length and depth) in a conductive plate. The achieved approach by the novel combination of a finite element method (FEM) with a statistical learning method is called least square support vector machines (LS-SVM). First, we use the FEM to design the forward problem. Next, an algorithm is used to find an adaptive database. Finally, the LS-SVM is used to solve the inverse problems, creating polynomial functions able to approximate the correlation between the crack dimension and the signal picked up from the EC sensor. Several methods are used to find the parameters of the LS-SVM. In this study, the particle swarm optimization (PSO) and genetic algorithm (GA) are proposed for tuning the LS-SVM. The results of the design and the inversions were compared to both simulated and experimental data, with accuracy experimentally verified. These suggested results prove the applicability of the presented approach.
Note: Eddy current displacement sensors independent of target conductivity.
Wang, Hongbo; Li, Wei; Feng, Zhihua
2015-01-01
Eddy current sensors (ECSs) are widely used for non-contact displacement measurement. In this note, the quantitative error of an ECS caused by target conductivity was analyzed using a complex image method. The response curves (L-x) of the ECS with different targets were similar and could be overlapped by shifting the curves on x direction with √2δ/2. Both finite element analysis and experiments match well with the theoretical analysis, which indicates that the measured error of high precision ECSs caused by target conductivity can be completely eliminated, and the ECSs can measure different materials precisely without calibration.
FLUXPART: An FOSS solution for Eddy covariance flux partitioning
USDA-ARS?s Scientific Manuscript database
We report on efforts to develop a FOSS solution for a particular geoscience application. Eddy covariance (EC) instruments are routinely used to measure field-scale evapotranspiration and CO2 fluxes. For many applications, it is desirable to partition the measured evapotranspiration flux into its c...
Yuan, W.; Liu, S.; Zhou, G.; Tieszen, L.L.; Baldocchi, D.; Bernhofer, C.; Gholz, H.; Goldstein, Allen H.; Goulden, M.L.; Hollinger, D.Y.; Hu, Y.; Law, B.E.; Stoy, Paul C.; Vesala, T.; Wofsy, S.C.
2007-01-01
The quantitative simulation of gross primary production (GPP) at various spatial and temporal scales has been a major challenge in quantifying the global carbon cycle. We developed a light use efficiency (LUE) daily GPP model from eddy covariance (EC) measurements. The model, called EC-LUE, is driven by only four variables: normalized difference vegetation index (NDVI), photosynthetically active radiation (PAR), air temperature, and the Bowen ratio of sensible to latent heat flux (used to calculate moisture stress). The EC-LUE model relies on two assumptions: First, that the fraction of absorbed PAR (fPAR) is a linear function of NDVI; Second, that the realized light use efficiency, calculated from a biome-independent invariant potential LUE, is controlled by air temperature or soil moisture, whichever is most limiting. The EC-LUE model was calibrated and validated using 24,349 daily GPP estimates derived from 28 eddy covariance flux towers from the AmeriFlux and EuroFlux networks, covering a variety of forests, grasslands and savannas. The model explained 85% and 77% of the observed variations of daily GPP for all the calibration and validation sites, respectively. A comparison with GPP calculated from the Moderate Resolution Imaging Spectroradiometer (MODIS) indicated that the EC-LUE model predicted GPP that better matched tower data across these sites. The realized LUE was predominantly controlled by moisture conditions throughout the growing season, and controlled by temperature only at the beginning and end of the growing season. The EC-LUE model is an alternative approach that makes it possible to map daily GPP over large areas because (1) the potential LUE is invariant across various land cover types and (2) all driving forces of the model can be derived from remote sensing data or existing climate observation networks.
Multiplexed HTS rf SQUID magnetometer array for eddy current testing of aircraft rivet joints
NASA Astrophysics Data System (ADS)
Gärtner, S.; Krause, H.-J.; Wolters, N.; Lomparski, D.; Wolf, W.; Schubert, J.; Kreutzbruck, M. v.; Allweins, K.
2002-05-01
Using three rf SQUID magnetometers, a multiplexed SQUID array was implemented. The SQUIDs are positioned in line with 7 mm spacing and operated using one feedback electronics with sequential read out demodulation at different radio frequencies (rf). The cross-talk between SQUID channels was determined to be negligible. To show the performance of the SQUID array, eddy current (EC) measurements of aluminum aircraft samples in conjunction with a differential (double-D) EC excitation and lock-in readout were carried out. With computer-controlled continuous switching of the SQUIDs during the scan, three EC signal traces of the sample are obtained simultaneously. We performed measurements with an EC excitation frequency of 135 Hz to localize an artificial crack (sawcut flaw) of 20 mm length in an aluminum sheet with 0.6 mm thickness. The flaw was still detected when covered with aluminum of up to 10 mm thickness. In addition, measurements with varying angles between scanning direction and flaw orientation are presented.
Precise on-machine extraction of the surface normal vector using an eddy current sensor array
NASA Astrophysics Data System (ADS)
Wang, Yongqing; Lian, Meng; Liu, Haibo; Ying, Yangwei; Sheng, Xianjun
2016-11-01
To satisfy the requirements of on-machine measurement of the surface normal during complex surface manufacturing, a highly robust normal vector extraction method using an Eddy current (EC) displacement sensor array is developed, the output of which is almost unaffected by surface brightness, machining coolant and environmental noise. A precise normal vector extraction model based on a triangular-distributed EC sensor array is first established. Calibration of the effects of object surface inclination and coupling interference on measurement results, and the relative position of EC sensors, is involved. A novel apparatus employing three EC sensors and a force transducer was designed, which can be easily integrated into the computer numerical control (CNC) machine tool spindle and/or robot terminal execution. Finally, to test the validity and practicability of the proposed method, typical experiments were conducted with specified testing pieces using the developed approach and system, such as an inclined plane and cylindrical and spherical surfaces.
Assessing and correcting spatial representativeness of tower eddy-covariance flux measurements
NASA Astrophysics Data System (ADS)
Metzger, S.; Xu, K.; Desai, A. R.; Taylor, J. R.; Kljun, N.; Blanken, P.; Burns, S. P.; Scott, R. L.
2014-12-01
Estimating the landscape-scale exchange of ecologically relevant trace gas and energy fluxes from tower eddy-covariance (EC) measurements is often complicated by surface heterogeneity. For example, a tower EC measurement may represent less than 1% of a grid cell resolved by mechanistic models (order 100-1000 km2). In particular for data assimilation or comparison with large-scale observations, it is hence critical to assess and correct the spatial representativeness of tower EC measurements. We present a procedure that determines from a single EC tower the spatio-temporally explicit flux field of its surrounding. The underlying principle is to extract the relationship between biophysical drivers and ecological responses from measurements under varying environmental conditions. For this purpose, high-frequency EC flux processing and source area calculations (≈60 h-1) are combined with remote sensing retrievals of land surface properties and subsequent machine learning. Methodological details are provided in our companion presentation "Towards the spatial rectification of tower-based eddy-covariance flux observations". We apply the procedure to one year of data from each of four AmeriFlux sites under different climate and ecological environments: Lost Creek shrub fen wetland, Niwot Ridge subalpine conifer, Park Falls mixed forest, and Santa Rita mesquite savanna. We find that heat fluxes from the Park Falls 122-m-high EC measurement and from a surrounding 100 km2 target area differ up to 100 W m-2, or 65%. Moreover, 85% and 24% of the EC flux observations are adequate surrogates of the mean surface-atmosphere exchange and its spatial variability across a 900 km2 target area, respectively, at 5% significance and 80% representativeness levels. Alternatively, the resulting flux grids can be summarized as probability density functions, and used to inform mechanistic models directly with the mean flux value and its spatial variability across a model grid cell. Lastly, for each site we evaluate the applicability of the procedure based on a full bottom-up uncertainty budget.
USDA-ARS?s Scientific Manuscript database
The lack of energy closure has been a longstanding issue with Eddy Covariance (EC). Multiple mechanisms have been proposed to explain the discrepancies in energy balance including diurnal energy storage changes, advection of energy, and larger scale turbulent processes that cannot be resolved by fi...
Challenges and benefits on long-term eddy covariance measurements over lakes
NASA Astrophysics Data System (ADS)
Vesala, Timo; Golub, Malgorzata; Desai, Ankur; Heiskanen, Jouni; Provenzale, Maria; Rantakari, Miitta; Ojala, Anne; Mammarella, Ivan
2017-04-01
Eddy Covariance (EC) data on carbon dioxide fluxes is presently available on about 30 lakes but the time series are mostly short, order of one year. Longer EC series together with chamber measurements and appropriate auxiliary data on water column allow for more accurate estimates of the aquatic component in terrestrial carbon balance and analysis of the environmental controls. We discuss on challenges for long-term EC measurements over freshwater ecosystems and demonstrate the benefits of EC data for carbon cycle studies via examples from long-term sites EC sites in Finland. We discuss on the auxiliary measurements needed and the general design of the whole measurement set-up to get representative information. We discuss on challenges related to the CO2 flux partitioning for freshwater ecosystems and introduce a new method to estimate the net primary productivity (NPP) on EC data, which is superior to more traditional methods (bottle incubations, 14C technique) with a poor temporal resolution. Finally, we collected and analyzed CO2 fluxes from 19 globally distributed lakes and reservoirs representing six climate zones. The mean flux was c. 0.3 micro mole / m2 s. We applied a simple upscaling to the direct observations and ended up to the estimate which is about half of the current emission estimate for lentic systems.
Characterization of potential EC flux underestimation of "sticky" trace gas species
NASA Astrophysics Data System (ADS)
Neftel, Albrecht; Hensen, Arjan; Ibrom, Andreas; Ammann, Christof; Voglmeier, Karl; Brümmer, Christian
2017-04-01
Eddy covariance (EC) flux measurements of "sticky" trace gas species are affected of damping of high frequency variations of the gas concentration. Several approaches have been developed to correct for this effect (see e.g. Ibrom et al., 2007, Ammann et al., 2006). These approaches have in common that the spectral properties of the scalar are compared with the sonic temperature deduced from the Sonic anemometer data that is only marginally damped. A main difference between the two method is that one uses power spectra, while the other is based on co-spectra of the gas concentration with the vertical wind speed. NH3 fluxes used in the analysis stem from two field experiments: a) Posieux intercomparison October 2015: NH3 emissions of a grazed pasture measured with Eddy Covariance using an Aerodyne quantum cascade laser and with a horizontal gradient measurement using MiniDOAS systems (Sintermann et al., 2016) in conjunction with a dispersion model. b) Dronten experiment June 2016 in the Netherlands: NH3 emissions from two manured circles within 40m diameters have been determined with four different approaches (Eddy Covariance, Integrated Horizontal Flux approach, horizontal gradients and plume measurements). Despite correction with standard methods, turbulent NH3 flux measurements with the eddy covariance method seem still be underestimated when, e.g., compared to flux estimated using gradient methods. We discuss possible correction algorithms and how such underestimations can be recognized in the usual case, where no alternative flux estimation methods are available. References: Ammann, C., Brunner, A., Spirig, C., and Neftel, A. 2006: Technical note: Water vapour concentration and flux measurements with PTR-MS, Atmos. Chem. Phys., 6, 4643-4651 Ibrom, A., Dellwik, E., Jensen, N.O., Flyvbjerg, H. and Pilegaard, K., 2007. Strong low-pass filtering effects on water vapour flux measurements with closed-path eddy correlation systems. Agricultural and Forest Meteorology, 147: 140 -156. Sintermann, J., Dietrich, K., Hani, C., Bell, M., Jocher, M., and Neftel, A. 2016 A miniDOAS instrument optimised for ammonia field measurements, Atmos Meas Tech, 9, 2721-2734
Determining Confounding Sensitivities In Eddy Current Thin Film Measurements
DOE Office of Scientific and Technical Information (OSTI.GOV)
Gros, Ethan; Udpa, Lalita; Smith, James A.
Determining Confounding Sensitivities In Eddy Current Thin Film Measurements Ethan Gros, Lalita Udpa, Electrical Engineering, Michigan State University, East Lansing MI 48824 James A. Smith, Experiment Analysis, Idaho National Laboratory, Idaho Falls ID 83415 Eddy current (EC) techniques are widely used in industry to measure the thickness of non-conductive films on a metal substrate. This is done using a system whereby a coil carrying a high-frequency alternating current is used to create an alternating magnetic field at the surface of the instrument's probe. When the probe is brought near a conductive surface, the alternating magnetic field will induce ECs inmore » the conductor. The substrate characteristics and the distance of the probe from the substrate (the coating thickness) affect the magnitude of the ECs. The induced currents load the probe coil affecting the terminal impedance of the coil. The measured probe impedance is related to the lift off between coil and conductor as well as conductivity of the test sample. For a known conductivity sample, the probe impedance can be converted into an equivalent film thickness value. The EC measurement can be confounded by a number of measurement parameters. It is the goal of this research to determine which physical properties of the measurement set-up and sample can adversely affect the thickness measurement. The eddy current testing is performed using a commercially available, hand held eddy current probe (ETA3.3H spring loaded eddy probe running at 8 MHz) that comes with a stand to hold the probe. The stand holds the probe and adjusts the probe on the z-axis to help position the probe in the correct area as well as make precise measurements. The signal from the probe is sent to a hand held readout, where the results are recorded directly in terms of liftoff or film thickness. Understanding the effect of certain factors on the measurements of film thickness, will help to evaluate how accurate the ETA3.3H spring loaded eddy probe is at measuring film thickness under varying experimental conditions. This research will study the effects of a number of factors such as i) calibration, ii) conductivity, iii) edge effect, iv) surface finish of base material and v) cable condition and compare with the long term reproducibility of a standard measurement. This work was performed with support from the Department of Energy under the United States National Nuclear Security Administration (NNSA) at the Idaho National Laboratory.« less
Evapotranspiration Measurements over Different Surfaces in the Heihe River Basin
NASA Astrophysics Data System (ADS)
Xu, Z. W.; Liu, S. M.; Bai, J.
2009-09-01
Based on observations of eddy covariance systems (EC) and large aperture scintillometer (LAS) conducted over the Heihe River Basin in 2008, China, diurnal /seasonal variations of energy and water fluxes, especially characteristics of evapotranspiration (ET) over different surfaces are analyzed, namely, oasis cropland (Yingke site, for short YK site), alpine meadow (A'Rou site, for short AR site), and spruce forest (Guantan site, for short GT site). Besides, the source areas of EC and LAS are calculated for different sites and reasons of the difference between sensible heat fluxes measured by EC and LAS are discussed. The results show that the source areas of EC are different among the sites, while the main contributing areas concentrate on a scope of 500m around the EC point. The main contributing area for LAS distributes perpendicular to the path length and about 250m apart from it. The underlying surfaces in the source area change obviously in the plant growing season and non-growing season at all sites. There are clear diurnal and seasonal variations of energy and water fluxes at all sites. Sensible heat flux is the main energy consumption during plant non-growing seasons. During plant growing seasons, latent heat flux dominates the energy budget at YK and AR sites, and obvious "oasis effect” is observed at YK site. In the GT site, sensible heat flux is the dominant component of energy budget all the time. ET at YK site is larger than those at the other two sites (the maximum daily ET is larger than 6mm), while ET at GT site is relatively small (daily ET is less than 4mm). The monthly ET reaches the peak value in July, August and June for YK, AR, and GT site, respectively. Sensible heat flux measured by LAS at AR site is generally larger than that of EC measurement at the same site. The reason, besides the differences of the overlapped source areas of EC and LAS systems and heterogeneity of the underlying surfaces, is the contribution of larger eddies to the energy transport, which can't be measured by EC system. KEY WORDS: evapotranspiration; eddy covariance system; large aperture scintillometer; different scales
Measurement of the depth of narrow slotted sections in eddy current reference standards
NASA Astrophysics Data System (ADS)
Kim, Young-Joo; Kim, Young-gil; Ahn, Bongyoung; Yoon, Dong-Jin
2007-02-01
The dimensions of the slots in eddy current (EC) reference standards are too narrow to be measured by general depth measurement methods such as the optical (laser) or stylus methods. However, measurement of the dimensions of the machined slots is a prerequisite to using the blocks as references. The present paper suggests a measurement method for the slotted section using an ultrasonic test. The width and depth of the slots measured in our study are roughly 0.1 mm and 0.5 mm, respectively. The time of flight (TOF) of the ultrasonic wave was measured precisely. The ultrasonic velocity in the material of the EC reference standard was calculated with the measured values of the TOF and its thickness. Reflected waves from the tip of the slot and the bottom surface of the EC standard were successfully classified. Using this method we have successfully determined the depth of the slotted section.
Procedure for Automated Eddy Current Crack Detection in Thin Titanium Plates
NASA Technical Reports Server (NTRS)
Wincheski, Russell A.
2012-01-01
This procedure provides the detailed instructions for conducting Eddy Current (EC) inspections of thin (5-30 mils) titanium membranes with thickness and material properties typical of the development of Ultra-Lightweight diaphragm Tanks Technology (ULTT). The inspection focuses on the detection of part-through, surface breaking fatigue cracks with depths between approximately 0.002" and 0.007" and aspect ratios (a/c) of 0.2-1.0 using an automated eddy current scanning and image processing technique.
Rice evapotranspiration at the field and canopy scales under water-saving irrigation
NASA Astrophysics Data System (ADS)
Liu, Xiaoyin; Xu, Junzeng; Yang, Shihong; Zhang, Jiangang
2018-04-01
Evapotranspiration (ET) is an important process of land surface water and thermal cycling, with large temporal and spatial variability. To reveal the effect of water-saving irrigation (WSI) on rice ET at different spatial scales and understand the cross spatial scale difference, rice ET under WSI condition at canopy (ETCML) and field scale (ETEC) were measured simultaneously by mini-lysimeter and eddy covariance (EC) in the rice season of 2014. To overcome the shortage of energy balance deficit by EC system, and evaluate the influence of energy balance closure degree on ETEC, ETEC was corrected as {ET}_{EC}^{*} by energy balance closure correction according to the evaporative fraction. Seasonal average daily ETEC, {ET}_{EC}^{*} and ETCML of rice under WSI practice were estimated as 3.12, 4.03 and 4.35 mm day-1, smaller than the values reported in flooded paddy fields. Daily ETEC, {ET}_{EC}^{*} and ETCML varied in a similar trends and reached the maximum in late tillering, then decreased along with the crop growth in late season. The value of ETEC was much lower than ETCML, and was frequently 1-2 h lagged behind ETCML. It indicated that the energy balance deficit resulted in underestimation of crop ET by EC system. The corrected value of {ET}_{EC}^{*} matched ETCML much better than ETEC, with a smaller RMSE (0.086 mm h-1) and higher R 2 (0.843) and IOA (0.961). The time lapse between {ET}_{EC}^{*} and ETCML was mostly shortened to less than 0.5 h. The multiple stepwise regression analysis indicated that net radiation ( R n) is the dominant factor for rice ET, and soil moisture ( θ) is another significant factor ( p < 0.01) in WSI rice fields. The difference between ETCML and {ET}_{EC}^{*} ({ET}_{CML} - {ET}_{EC}^{*}) were significantly ( p < 0.05) correlated with R n, air temperature ( T a), and air vapor pressure deficit ( D), and its partial correlation coefficients to R n and T a were slightly greater than D. Thus, R n, T a and D are important variables for understanding the spatial scale effect of rice ET in WSI fields, and for its cross scale conversion.
USDA-ARS?s Scientific Manuscript database
Eddy Covariance (EC) is widely used for direct, non-invasive observations of land-atmosphere energy and mass fluxes. However, EC observations of available energy fluxes are usually less than fluxes inferred from radiometer and soil heat flux observations; thus introducing additional uncertainty in u...
Nonlinear, non-stationary image processing technique for eddy current NDE
NASA Astrophysics Data System (ADS)
Yang, Guang; Dib, Gerges; Kim, Jaejoon; Zhang, Lu; Xin, Junjun; Udpa, Lalita
2012-05-01
Automatic analysis of eddy current (EC) data has facilitated the analysis of large volumes of data generated in the inspection of steam generator tubes in nuclear power plants. The traditional procedure for analysis of EC data includes data calibration, pre-processing, region of interest (ROI) detection, feature extraction and classification. Accurate ROI detection has been enhanced by pre-processing, which involves reducing noise and other undesirable components as well as enhancing defect indications in the raw measurement. This paper presents the Hilbert-Huang Transform (HHT) for feature extraction and support vector machine (SVM) for classification. The performance is shown to significantly better than the existing rule based classification approach used in industry.
Owen, Nick A; Choncubhair, Órlaith Ní; Males, Jamie; Del Real Laborde, José Ignacio; Rubio-Cortés, Ramón; Griffiths, Howard; Lanigan, Gary
2016-02-01
Mass and energy fluxes were measured over a field of Agave tequilana in Mexico using eddy covariance (EC) methodology. Data were gathered over 252 d, including the transition from wet to dry periods. Net ecosystem exchanges (FN,EC ) displayed a crassulacean acid metabolism (CAM) rhythm that alternated from CO2 sink at night to CO2 source during the day, and partitioned canopy fluxes (FA,EC ) showed a characteristic four-phase CO2 exchange pattern. Results were cross-validated against diel changes in titratable acidity, leaf-unfurling rates, energy exchange fluxes and reported biomass yields. Projected carbon balance (g C m(-2) year(-1) , mean ± 95% confidence interval) indicated the site was a net sink of -333 ± 24, of which contributions from soil respiration were +692 ± 7, and FA,EC was -1025 ± 25. EC estimated biomass yield was 20.1 Mg (dry) ha(-1) year(-1) . Average integrated daily FA,EC was -234 ± 5 mmol CO2 m(-2) d(-1) and persisted almost unchanged after 70 d of drought conditions. Regression analyses were performed on the EC data to identify the best environmental predictors of FA . Results suggest that the carbon acquisition strategy of Agave offers productivity and drought resilience advantages over conventional semi-arid C3 and C4 bioenergy candidates. © 2015 John Wiley & Sons Ltd.
Liu, Dan; Cai, Wenwen; Xia, Jiangzhou; Dong, Wenjie; Zhou, Guangsheng; Chen, Yang; Zhang, Haicheng; Yuan, Wenping
2014-01-01
Gross Primary Production (GPP) is the largest flux in the global carbon cycle. However, large uncertainties in current global estimations persist. In this study, we examined the performance of a process-based model (Integrated BIosphere Simulator, IBIS) at 62 eddy covariance sites around the world. Our results indicated that the IBIS model explained 60% of the observed variation in daily GPP at all validation sites. Comparison with a satellite-based vegetation model (Eddy Covariance-Light Use Efficiency, EC-LUE) revealed that the IBIS simulations yielded comparable GPP results as the EC-LUE model. Global mean GPP estimated by the IBIS model was 107.50±1.37 Pg C year(-1) (mean value ± standard deviation) across the vegetated area for the period 2000-2006, consistent with the results of the EC-LUE model (109.39±1.48 Pg C year(-1)). To evaluate the uncertainty introduced by the parameter Vcmax, which represents the maximum photosynthetic capacity, we inversed Vcmax using Markov Chain-Monte Carlo (MCMC) procedures. Using the inversed Vcmax values, the simulated global GPP increased by 16.5 Pg C year(-1), indicating that IBIS model is sensitive to Vcmax, and large uncertainty exists in model parameterization.
Eddy covariance measurements of carbon dioxide and water fluxes in Mid-South US cotton
USDA-ARS?s Scientific Manuscript database
An eddy covariance (EC) system was used to quantify carbon dioxide (CO2) and water (H2O) fluxes as net ecosystem exchange (NEE) and crop evapotranspiration (ET), respectively, in a production-sized cotton field in Northeastern Arkansas in 2016 and 2017 growing seasons. Average ET was 0.13±0.01 in d-...
NASA Astrophysics Data System (ADS)
Tang, M.; Tsai, J.; Tsuang, B.; Feng, P.; Kuo, P.
2012-12-01
In the past decades, more and more attention was given to the increase of atmospheric methane concentration from the scientific community. Methane is one of greenhouse gases with a global warming potential 21 times greater than carbon dioxide on a 100-year horizon. Rice paddy fields were considered as a major source for methane and so far there are few studies where the eddy covariance (EC) technique has been used to measure methane fluxes from rice paddy fields, especially in Asia. Therefore, in this study we used EC technique and relaxed eddy accumulation (REA) method simultaneously to observe the methane fluxes over rice paddy, fertilized with pig manure, in Taiwan from 22th February to 5th June in 2012. A suit of Micrometeorologial variables and water table depth were measured in conjunction with the fluxes. The results showed that the rice paddy field was source of methane during most of the study period and the observed methane fluxes ranged between - 0.5 and 13 μg m-2 s-1. and the maximum values usually occurred in the afternoon. A significant methane emission was observed in the first one and a half month after transplanting. Comparison of daily methane fluxes measured by EC and REA showed generally good agreement between both methods with a coefficient of determination of 0.81, although the magnitude of methane fluxes measured by REA were slightly lower than those by EC. During the continuous flooded period, the methane fluxes can be depicted well by a function of soil temperature with an exponential form. Sudden pulses of methane fluxes were observed when drained for the removal of obstruction which hindered the methane diffuse from the soil to the atmosphere. During fallow period between growth periods, the paddy fields was a sink of methane where the methane uptake was about 0.5μg m-2 s-1 around noon.
Eddy covariance flux measurements of gaseous elemental mercury using cavity ring-down spectroscopy.
Pierce, Ashley M; Moore, Christopher W; Wohlfahrt, Georg; Hörtnagl, Lukas; Kljun, Natascha; Obrist, Daniel
2015-02-03
A newly developed pulsed cavity ring-down spectroscopy (CRDS) system for measuring atmospheric gaseous elemental mercury (GEM) concentrations at high temporal resolution (25 Hz) was used to successfully conduct the first eddy covariance (EC) flux measurements of GEM. GEM is the main gaseous atmospheric form, and quantification of bidirectional exchange between the Earth's surface and the atmosphere is important because gas exchange is important on a global scale. For example, surface GEM emissions from natural sources, legacy emissions, and re-emission of previously deposited anthropogenic pollution may exceed direct primary anthropogenic emissions. Using the EC technique for flux measurements requires subsecond measurements, which so far has not been feasible because of the slow time response of available instrumentation. The CRDS system measured GEM fluxes, which were compared to fluxes measured with the modified Bowen ratio (MBR) and a dynamic flux chamber (DFC). Measurements took place near Reno, NV, in September and October 2012 encompassing natural, low-mercury (Hg) background soils and Hg-enriched soils. During nine days of measurements with deployment of Hg-enriched soil in boxes within 60 m upwind of the EC tower, the covariance of GEM concentration and vertical wind speed was measured, showing that EC fluxes over an Hg-enriched area were detectable. During three separate days of flux measurements over background soils (without Hg-enriched soils), no covariance was detected, indicating fluxes below the detection limit. When fluxes were measurable, they strongly correlated with wind direction; the highest fluxes occurred when winds originated from the Hg-enriched area. Comparisons among the three methods showed good agreement in direction (e.g., emission or deposition) and magnitude, especially when measured fluxes originated within the Hg-enriched soil area. EC fluxes averaged 849 ng m(-2) h(-1), compared to DFC fluxes of 1105 ng m(-2) h(-1) and MBR fluxes of 1309 ng m(-2) h(-1). This study demonstrated that a CRDS system can be used to measure GEM fluxes over Hg-enriched areas, with a conservative detection limit estimate of 32 ng m(-2) h(-1).
Xu, Dan; Maier, Joseph K; King, Kevin F; Collick, Bruce D; Wu, Gaohong; Peters, Robert D; Hinks, R Scott
2013-11-01
The proposed method is aimed at reducing eddy current (EC) induced distortion in diffusion weighted echo planar imaging, without the need to perform further image coregistration between diffusion weighted and T2 images. These ECs typically have significant high order spatial components that cannot be compensated by preemphasis. High order ECs are first calibrated at the system level in a protocol independent fashion. The resulting amplitudes and time constants of high order ECs can then be used to calculate imaging protocol specific corrections. A combined prospective and retrospective approach is proposed to apply correction during data acquisition and image reconstruction. Various phantom, brain, body, and whole body diffusion weighted images with and without the proposed method are acquired. Significantly reduced image distortion and misregistration are consistently seen in images with the proposed method compared with images without. The proposed method is a powerful (e.g., effective at 48 cm field of view and 30 cm slice coverage) and flexible (e.g., compatible with other image enhancements and arbitrary scan plane) technique to correct high order ECs induced distortion and misregistration for various diffusion weighted echo planar imaging applications, without the need for further image post processing, protocol dependent prescan, or sacrifice in signal-to-noise ratio. Copyright © 2013 Wiley Periodicals, Inc.
Guo, Jia; Meakin, James A; Jezzard, Peter; Wong, Eric C
2015-03-01
Velocity-selective arterial spin labeling (VSASL) tags arterial blood on a velocity-selective (VS) basis and eliminates the tagging/imaging gap and associated transit delay sensitivity observed in other ASL tagging methods. However, the flow-weighting gradient pulses in VS tag preparation can generate eddy currents (ECs), which may erroneously tag the static tissue and create artificial perfusion signal, compromising the accuracy of perfusion quantification. A novel VS preparation design is presented using an eight-segment B1 insensitive rotation with symmetric radio frequency and gradient layouts (sym-BIR-8), combined with delays after gradient pulses to optimally reduce ECs of a wide range of time constants while maintaining B0 and B1 insensitivity. Bloch simulation, phantom, and in vivo experiments were carried out to determine robustness of the new and existing pulse designs to ECs, B0 , and B1 inhomogeneity. VSASL with reduced EC sensitivity across a wide range of EC time constants was achieved with the proposed sym-BIR-8 design, and the accuracy of cerebral blood flow measurement was improved. The sym-BIR-8 design performed the most robustly among the existing VS tagging designs, and should benefit studies using VS preparation with improved accuracy and reliability. © 2014 Wiley Periodicals, Inc.
NASA Astrophysics Data System (ADS)
Jocher, Georg; Marshall, John; Nilsson, Mats B.; Linder, Sune; De Simon, Giuseppe; Hörnlund, Thomas; Lundmark, Tomas; Näsholm, Torgny; Ottosson Löfvenius, Mikaell; Tarvainen, Lasse; Wallin, Göran; Peichl, Matthias
2018-02-01
Apparent net uptake of carbon dioxide (CO2) during wintertime by an ˜ 90 year old Scots pine stand in northern Sweden led us to conduct canopy decoupling and subcanopy advection investigations over an entire year. Eddy covariance (EC) measurements ran simultaneously above and within the forest canopy for that purpose. We used the correlation of above- and below-canopy standard deviation of vertical wind speed (σw) as decoupling indicator. We identified 0.33 m s-1 and 0.06 m s-1 as site-specific σw thresholds for above- and below-canopy coupling during nighttime (global radiation <20 W m-2) and 0.23 m s-1 and 0.06 m s-1 as daytime (global radiation >20 W m-2) σw thresholds. Decoupling occurred in 53% of the annual nighttime and 14% of the annual daytime. The annual net ecosystem exchange (NEE), gross ecosystem exchange (GEE), and ecosystem respiration (Reco) derived via two-level filtered EC data were -357 g C m-2, -1,138 g C m-2, and 781 g C m-2, respectively. In comparison, both single-level friction velocity (u*) and quality filtering resulted in 22% higher NEE, mainly caused by 16% lower Reco. GEE remained similar among filtering regimes. Accounting for changes of CO2 storage across the canopy in the single-level filtered data could only marginally decrease these discrepancies. Consequently, advection appears to be responsible for the major part of this divergence. We conclude that the two-level filter is necessary to adequately address decoupling and subcanopy advection at our site, and we recommend this filter for all forested EC sites.
Ranjeet John; Jiquan Chen; Asko Noormets; Xiangming Xiao; Jianye Xu; Nan Lu; Shiping Chen
2013-01-01
We evaluate the modelling of carbon fluxes from eddy covariance (EC) tower observations in different water-limited land-cover/land-use (LCLU) and biome types in semi-arid Inner Mongolia, China. The vegetation photosynthesis model (VPM) and modified VPM (MVPM), driven by the enhanced vegetation index (EVI) and land-surface water index (LSWI), which were derived from the...
Using the Surface Renewal Technique to Estimate CO2 Exchange from a Rice Field to the Atmosphere
NASA Astrophysics Data System (ADS)
Suvocarev, K.; Reba, M. L.; Runkle, B.
2015-12-01
Measuring CO2 emissions as surface fluxes is crucial for climate change predictions. One major set of techniques to measure surface fluxes is through continuous micrometeorological observations over different landscapes. Recent approaches of the surface renewal method (SR) are becoming important for their capacity to independently measure sensible (H) and latent heat (LE) fluxes while avoiding some of the shortcomings of the eddy covariance method (EC). Unlike EC, SR avoids orientation limitations, leveling requirements and instrumentation separation and shadowing issues. The main advantage of SR over EC method is in its applicability in both roughness and inertial sub-layers. Therefore, SR measurements can be planned in cases where fetch requirements are not adequate for EC application. We applied the recent approach as suggested by Castellvi et al. (2008) over two months (May to July, 2015) of high-frequency data collected by EC equipment from a rice field in Arkansas. The main goal was to extend this SR application to CO2 fluxes (Fc) over agricultural fields. The results show high correlation between EC and SR fluxes (H, LE and Fc) when they are compared for all atmospheric stability conditions (R2 > 0.75). Some overestimation is observed for SR with respect to EC fluxes, similar to the findings of Castellvi et al. (2008) for rangeland grass. For all the data, SR analysis results were about 11%, 18% and 17% higher than the EC results for H, LE and Fc, respectively. These higher flux estimates resulted in better energy balance closure. The root mean square error for Fc was 6.55 μmol m-2 s-1. The observed overestimation will be addressed in the future by using additional methods for the turbulent fluxes quantification.
W. J. Massman; A. Ibrom
2008-01-01
Recent studies with closed-path eddy covariance (EC) systems have indicated that the attenuation of fluctuations of water vapor concentration is dependent upon ambient relative humidity, presumably due to sorption/desorption of water molecules at the interior surface of the tube. Previous studies of EC-related tube attenuation effects have either not considered this...
Amplitude-independent flaw length determination using differential eddy current
NASA Astrophysics Data System (ADS)
Shell, E.
2013-01-01
Military engine component manufacturers typically specify the eddy current (EC) inspection requirements as a crack length or depth with the assumption that the cracks in both the test specimens and inspected component are of a similar fixed aspect ratio. However, differential EC response amplitude is dependent on the area of the crack face, not the length or depth. Additionally, due to complex stresses, in-service cracks do not always grow in the assumed manner. It would be advantageous to use more of the information contained in the EC data to better determine the full profile of cracks independent of the fixed aspect ratio amplitude response curve. A specimen with narrow width notches is used to mimic cracks of varying aspect ratios in a controllable manner. The specimen notches have aspect ratios that vary from 1:1 to 10:1. Analysis routines have been developed using the shape of the EC response signals that can determine the length of a surface flaw of common orientations without use of the amplitude of the signal or any supporting traditional probability of detection basis. Combined with the relationship between signal amplitude and area, the depth of the flaw can also be calculated.
DOE Office of Scientific and Technical Information (OSTI.GOV)
Wang, Xingchang; Wang, Chuankuan; Bond-Lamberty, Benjamin
Carbon dioxide (CO 2) fluxes between terrestrial ecosystems and the atmosphere are primarily measured with eddy covariance (EC), biometric, and chamber methods. However, it is unclear why the estimates of CO 2-fluxes, when measured using these different methods, converge at some sites but diverge at others. We synthesized a novel global dataset of forest CO 2-fluxes to evaluate the consistency between EC and biometric or chamber methods for quantifying CO 2 budget in forests. The EC approach, comparing with the other two methods, tended to produce 25% higher estimate of net ecosystem production (NEP, 0.52Mg C ha-1 yr-1), mainly resultingmore » from lower EC-estimated Re; 10% lower ecosystem respiration (Re, 1.39Mg C ha-1 yr-1); and 3% lower gross primary production (0.48 Mg C ha-1 yr-1) The discrepancies between EC and the other methods were higher at sites with complex topography and dense canopies versus those with flat topography and open canopies. Forest age also influenced the discrepancy through the change of leaf area index. The open-path EC system induced >50% of the discrepancy in NEP, presumably due to its surface heating effect. These results provided strong evidence that EC produces biased estimates of NEP and Re in forest ecosystems. A global extrapolation suggested that the discrepancies in CO 2 fluxes between methods were consistent with a global underestimation of Re, and overestimation of NEP, by the EC method. Accounting for these discrepancies would substantially improve the our estimates of the terrestrial carbon budget .« less
Hill, Timothy; Chocholek, Melanie; Clement, Robert
2017-06-01
Eddy covariance (EC) continues to provide invaluable insights into the dynamics of Earth's surface processes. However, despite its many strengths, spatial replication of EC at the ecosystem scale is rare. High equipment costs are likely to be partially responsible. This contributes to the low sampling, and even lower replication, of ecoregions in Africa, Oceania (excluding Australia) and South America. The level of replication matters as it directly affects statistical power. While the ergodicity of turbulence and temporal replication allow an EC tower to provide statistically robust flux estimates for its footprint, these principles do not extend to larger ecosystem scales. Despite the challenge of spatially replicating EC, it is clearly of interest to be able to use EC to provide statistically robust flux estimates for larger areas. We ask: How much spatial replication of EC is required for statistical confidence in our flux estimates of an ecosystem? We provide the reader with tools to estimate the number of EC towers needed to achieve a given statistical power. We show that for a typical ecosystem, around four EC towers are needed to have 95% statistical confidence that the annual flux of an ecosystem is nonzero. Furthermore, if the true flux is small relative to instrument noise and spatial variability, the number of towers needed can rise dramatically. We discuss approaches for improving statistical power and describe one solution: an inexpensive EC system that could help by making spatial replication more affordable. However, we note that diverting limited resources from other key measurements in order to allow spatial replication may not be optimal, and a balance needs to be struck. While individual EC towers are well suited to providing fluxes from the flux footprint, we emphasize that spatial replication is essential for statistically robust fluxes if a wider ecosystem is being studied. © 2016 The Authors Global Change Biology Published by John Wiley & Sons Ltd.
NASA Astrophysics Data System (ADS)
Okafor, A. C.; Natarajan, S.
2007-03-01
Aging aircraft are prone to corrosion damage and fatigue cracks in riveted lap joints of fuselage skin panels. This can cause catastrophic failure if not detected and repaired. Hence detection of corrosion damage and monitoring its effect on structural integrity are essential. This paper presents multifrequency eddy current (EC) inspection of corrosion damage and machined material loss defect in clad A1 2024-T3 riveted lap joints and its effect on fatigue life. Results of eddy current inspection, corrosion product removal and fatigue testing are presented.
Coherence between woody carbon uptake and net ecosystem productivity at five eddy-covariance sites
NASA Astrophysics Data System (ADS)
Babst, F.; Bouriaud, O.; Papale, D.; Gielen, B.; Janssens, I.; Nikinmaa, E.; Ibrom, A.; Wu, J.; Bernhofer, C.; Koestner, B.; Gruenwald, T.; Seufert, G.; Ciais, P.; Frank, D. C.
2013-12-01
Forest growth ranks amongst the most important processes that determine the carbon balance of terrestrial ecosystems. Quantifications of forest carbon cycling can be made e.g. using biometric and eddy-covariance (EC) techniques. Both offer different perspectives on carbon uptake and attempts to combine them have been inconsistent and variably successful in the past. This contributes to persistent uncertainties regarding carbon allocation in forest ecosystems and complicates precise vegetation model parameterization. Aiming to reconcile assessments of carbon cycling from biometric and EC techniques, we measured radial tree growth and wood density at five long-term EC stations across Europe. The resulting records were used to calculate annual carbon uptake during above-ground wood formation and compared to monthly and seasonal CO2-flux measurements. Efforts were made to identify i) the time periods when EC and tree-ring data correspond best in different parts of Europe and ii) the fraction of eddy-fluxes which is associated with changes in above-ground woody carbon stocks. Biometric measurements and net ecosystem productivity (NEP) proved largely compatible at seasonal time scales while relationships with gross primary productivity (GPP) were often weaker. Results suggest a partitioning of sequestered carbon mainly used for volume increase (January-June) and a combination of cell-wall thickening and storage (July-September). The inter-annual variability in above-ground woody carbon uptake was significantly linked with absolute productivity ranging between 69-366 g C m-2 y-1 at boreal and temperate sites, thereby accounting for 10-25% of GPP, 15-32% of TER, and 25-80% of NEP. These findings from sites representing the major European climate zones and tree species contribute to improved quantification of above-ground carbon allocation in forests. Furthermore, they refine knowledge on processes driving ecosystem productivity important for e.g. vegetation models and provide an enhanced framework for integrative studies linking tree-ring parameters with EC measurements.
Temporal and spatial variations of sea surface temperature in the East China Sea
NASA Astrophysics Data System (ADS)
Tseng, Chente; Lin, Chiyuan; Chen, Shihchin; Shyu, Chungzen
2000-03-01
Sea surface temperature of the East China Sea (ECS) were analyzed using the NOAA/AVHRR SST images. These satellite images reveal surface features of ECS including mainly the Kuroshio Current, Kuroshio Branch Current, Taiwan Warm Current, China coastal water, Changjiang diluted water and Yellow Sea mixed cold water. The SST of ECS ranges from 27 to 29°C in summer; some cold eddies were found off northeast Taiwan and to the south of Changjiang mouth. SST anomalies at the center of these eddies were about 2-5°C. The strongest front usually occurs in May each year and its temperature gradient is about 5-6°C over a cross-shelf distance of 30 nautical miles. The Yellow Sea mixed cold water also provides a contrast from China Coastal waters shoreward of the 50 m isobath; cross-shore temperature gradient is about 6-8°C over 30 nautical miles. The Kuroshio intrudes into ECS preferably at two locations. The first is off northeast Taiwan; the subsurface water of Kuroshio is upwelled onto the shelf while the main current is deflected seaward. The second site is located at 31°N and 128°E, which is generally considered as the origin of the Tsushima Warm Current. More quantitatively, a 2-year time series of monthly SST images is examined using EOF analysis to determine the spatial and temporal variations in the northwestern portion of ECS. The first spatial EOF mode accounts for 47.4% of total spatial variance and reveals the Changjiang plume and coastal cold waters off China. The second and third EOF modes account for 16.4 and 9.6% of total variance, respectively, and their eigenvector images show the intrusion of Yellow Sea mixed cold waters and the China coastal water. The fourth EOF mode accounts for 5.4% of total variance and reveals cold eddies around Chusan Islands. The temporal variance EOF analysis is less revealing in this study area.
Shear velocity estimates on the inner shelf off Grays Harbor, Washington, USA
Sherwood, C.R.; Lacy, J.R.; Voulgaris, G.
2006-01-01
Shear velocity was estimated from current measurements near the bottom off Grays Harbor, Washington between May 4 and June 6, 2001 under mostly wave-dominated conditions. A downward-looking pulse-coherent acoustic Doppler profiler (PCADP) and two acoustic-Doppler velocimeters (field version; ADVFs) were deployed on a tripod at 9-m water depth. Measurements from these instruments were used to estimate shear velocity with (1) a modified eddy-correlation (EC) technique, (2) the log-profile (LP) method, and (3) a dissipation-rate method. Although values produced by the three methods agreed reasonably well (within their broad ranges of uncertainty), there were important systematic differences. Estimates from the EC method were generally lowest, followed by those from the inertial-dissipation method. The LP method produced the highest values and the greatest scatter. We show that these results are consistent with boundary-layer theory when sediment-induced stratification is present. The EC method provides the most fundamental estimate of kinematic stress near the bottom, and stratification causes the LP method to overestimate bottom stress. These results remind us that the methods are not equivalent and that comparison among sites and with models should be made carefully. ?? 2006 Elsevier Ltd. All rights reserved.
Singh, Ramesh K.; Liu, Shu-Guang; Tieszen, Larry L.; Suyker, Andrew E.; Verma, Shashi B.
2012-01-01
Gross primary production (GPP) is a key indicator of ecosystem performance, and helps in many decision-making processes related to environment. We used the Eddy covariancelight use efficiency (EC-LUE) model for estimating GPP in the Great Plains, United States in order to evaluate the performance of this model. We developed a novel algorithm for computing the photosynthetically active radiation (PAR) based on net radiation. A strong correlation (R2=0.94,N=24) was found between daily PAR and Landsat-based mid-day instantaneous net radiation. Though the Moderate Resolution Spectroradiometer (MODIS) based instantaneous net radiation was in better agreement (R2=0.98,N=24) with the daily measured PAR, there was no statistical significant difference between Landsat based PAR and MODIS based PAR. The EC-LUE model validation also confirms the need to consider biological attributes (C3 versus C4 plants) for potential light use efficiency. A universal potential light use efficiency is unable to capture the spatial variation of GPP. It is necessary to use C3 versus C4 based land use/land cover map for using EC-LUE model for estimating spatiotemporal distribution of GPP.
2015-11-10
the mean inflow into the ECS does not Z. Yu et al. / Ocean Modelling 96 (2015) 203–213 207 1995 1997 2000 2002 2005 2007 2010 2012 −20 −10 0 10 20 T...performed and the leading mode of the annual steric ef- ect ( Stammer , 1997) was also removed. Depending on the eddy lo- ation, the same type of eddy
NASA Astrophysics Data System (ADS)
Gerdel, Katharina; Spielmann, Felix M.; Hammerle, Albin; Wohlfahrt, Georg
2016-04-01
Carbonyl sulfide (COS) is the most abundant sulfur containing trace gas present in the troposphere at concentrations of around 500 ppt. Recent interest in COS by the ecosystem-physiological community has been sparked by the fact that COS co-diffuses into plant leaves pretty much the same way as carbon dioxide (CO2) does, but in contrast to CO2, COS is not known to be emitted by plants. Thus uptake of COS by vegetation has the potential to be used as a tracer for canopy gross photosynthesis, which cannot be measured directly, however represents a key term in the global carbon cycle. Since a few years, quantum cascade laser absorption spectrometers (QCLAS) are commercially available with the precision, sensitivity and time response suitable for eddy covariance (EC) flux measurements. While there exist a handful of published reports on EC flux measurements in the recent literature, no rigorous investigation of the applicability of QCLAS for EC COS flux measurements has been carried out so far, nor have been EC processing and QA/QC steps developed for carbon dioxide and water vapor flux measurements within FLUXNET been assessed for COS. The aim of this study is to close this knowledge gap, to discuss critical steps in the post-processing chain of COS EC flux measurements and to devise best-practice guidelines for COS EC flux data processing. To this end we collected EC COS (and CO2, H2O and CO) flux measurements above a temperate mountain grassland in Austria over the vegetation period 2015 with a commercially available QCLAS. We discuss various aspects of EC data post-processing, in particular issues with the time-lag estimation between sonic anemometer and QCLAS signals and QCLAS time series detrending, as well as QA/QC, in particular flux detection limits, random flux uncertainty, the interaction of various processing steps with common EC QA/QC filters (e.g. detrending and stationarity tests), u*-filtering, etc.
NASA Astrophysics Data System (ADS)
Burba, G. G.; Madsen, R.; Feese, K.
2013-12-01
The eddy covariance (EC) method is a micrometeorological technique for direct high-speed measurements of the transport of gases and energy between land or water surfaces and the atmosphere [1]. This method allows for observations of gas transport scales from 20-40 times per second to multiple years, represents gas exchange integrated over a large area, from hundreds of square meters to tens of square kilometres, and corresponds to gas exchange from the entire surface, including canopy, and soil or water layers. Gas fluxes, emission and exchange rates are characterized from single-point in situ measurements using permanent or mobile towers, or moving platforms such as automobiles, helicopters, airplanes, etc. Presently, over 600 eddy covariance stations are in operation in over 120 countries [1]. EC is now recognized as an effective method in regulatory and industrial applications, including CCUS [2-10]. Emerging projects utilize EC to continuously monitor large areas before and after the injections, to locate and quantify leakages where CO2 may escape from the subsurface, to improve storage efficiency, and for other CCUS characterizations [5-10]. Although EC is one of the most direct and defensible micrometeorological techniques measuring gas emission and transport, and complete automated stations and processing are readily available, the method is mathematically complex, and requires careful setup and execution specific to the site and project. With this in mind, step-by-step instructions were created in [1] to introduce a novice to the EC method, and to assist in further understanding of the method through more advanced references. In this presentation we provide brief highlights of the eddy covariance method, its application to geological carbon capture, utilization and storage, key requirements, instrumentation and software, and review educational resources particularly useful for carbon sequestration research. References: [1] Burba G. Eddy Covariance Method for Scientific, Industrial, Agricultural and Regulatory Applications. LI-COR Biosciences; 2013. [2] International Energy Agency. Quantification techniques for CO2 leakage. IEA-GHG; 2012. [3] US Department of Energy. Best Practices for Monitoring, Verification, and Accounting of CO2 Stored in Deep Geologic Formations. US DOE; 2012. [4] Liu G. (Ed.). Greenhouse Gases: Capturing, Utilization and Reduction. Intech; 2012. [5] Finley R. et al. An Assessment of Geological Carbon Sequestration Options in the Illinois Basin - Phase III. DOE-MGSC; DE-FC26-05NT42588; 2012. [6] LI-COR Biosciences. Surface Monitoring for Geologic Carbon Sequestration. LI-COR, 980-11916, 2011. [7] Lewicki J., Hilley G. Eddy covariance mapping and quantification of surface CO2 leakage fluxes. GRL, 2009; 36: L21802. [8] Finley R. An Assessment of Geological Carbon Sequestration in the Illinois Basin. Overview of the Decatur-Illinois Basin Site. DOE-MGSC; 2009. [9] Eggleston H., et al. (Eds). IPCC Guidelines for National Greenhouse Gas Inventories, IPCC NGGI P, WMO/UNEP; 2006-2011. [10] Burba G., Madsen R., Feese K. Eddy Covariance Method for CO2 Emission Measurements in CCUS Applications: Principles, Instrumentation and Software. Energy Procedia; Submitted: 1-8.
Moorhead, Jerry E.; Marek, Gary W.; Colaizzi, Paul D.; Gowda, Prasanna H.; Evett, Steven R.; Brauer, David K.; Marek, Thomas H.; Porter, Dana O.
2017-01-01
Accurate estimates of actual crop evapotranspiration (ET) are important for optimal irrigation water management, especially in arid and semi-arid regions. Common ET sensing methods include Bowen Ratio, Eddy Covariance (EC), and scintillometers. Large weighing lysimeters are considered the ultimate standard for measurement of ET, however, they are expensive to install and maintain. Although EC and scintillometers are less costly and relatively portable, EC has known energy balance closure discrepancies. Previous scintillometer studies used EC for ground-truthing, but no studies considered weighing lysimeters. In this study, a Surface Layer Scintillometer (SLS) was evaluated for accuracy in determining ET as well as sensible and latent heat fluxes, as compared to a large weighing lysimeter in Bushland, TX. The SLS was installed over irrigated grain sorghum (Sorghum bicolor (L.) Moench) for the period 29 July–17 August 2015 and over grain corn (Zea mays L.) for the period 23 June–2 October 2016. Results showed poor correlation for sensible heat flux, but much better correlation with ET, with r2 values of 0.83 and 0.87 for hourly and daily ET, respectively. The accuracy of the SLS was comparable to other ET sensing instruments with an RMSE of 0.13 mm·h−1 (31%) for hourly ET; however, summing hourly values to a daily time step reduced the ET error to 14% (0.75 mm·d−1). This level of accuracy indicates that potential exists for the SLS to be used in some water management applications. As few studies have been conducted to evaluate the SLS for ET estimation, or in combination with lysimetric data, further evaluations would be beneficial to investigate the applicability of the SLS in water resources management. PMID:29036926
Moorhead, Jerry E; Marek, Gary W; Colaizzi, Paul D; Gowda, Prasanna H; Evett, Steven R; Brauer, David K; Marek, Thomas H; Porter, Dana O
2017-10-14
Accurate estimates of actual crop evapotranspiration (ET) are important for optimal irrigation water management, especially in arid and semi-arid regions. Common ET sensing methods include Bowen Ratio, Eddy Covariance (EC), and scintillometers. Large weighing lysimeters are considered the ultimate standard for measurement of ET, however, they are expensive to install and maintain. Although EC and scintillometers are less costly and relatively portable, EC has known energy balance closure discrepancies. Previous scintillometer studies used EC for ground-truthing, but no studies considered weighing lysimeters. In this study, a Surface Layer Scintillometer (SLS) was evaluated for accuracy in determining ET as well as sensible and latent heat fluxes, as compared to a large weighing lysimeter in Bushland, TX. The SLS was installed over irrigated grain sorghum ( Sorghum bicolor (L.) Moench) for the period 29 July-17 August 2015 and over grain corn ( Zea mays L.) for the period 23 June-2 October 2016. Results showed poor correlation for sensible heat flux, but much better correlation with ET, with r² values of 0.83 and 0.87 for hourly and daily ET, respectively. The accuracy of the SLS was comparable to other ET sensing instruments with an RMSE of 0.13 mm·h -1 (31%) for hourly ET; however, summing hourly values to a daily time step reduced the ET error to 14% (0.75 mm·d -1 ). This level of accuracy indicates that potential exists for the SLS to be used in some water management applications. As few studies have been conducted to evaluate the SLS for ET estimation, or in combination with lysimetric data, further evaluations would be beneficial to investigate the applicability of the SLS in water resources management.
NASA Astrophysics Data System (ADS)
Felber, R.; Münger, A.; Neftel, A.; Ammann, C.
2015-06-01
Methane (CH4) from ruminants contributes one-third of global agricultural greenhouse gas emissions. Eddy covariance (EC) technique has been extensively used at various flux sites to investigate carbon dioxide exchange of ecosystems. Since the development of fast CH4 analyzers, the instrumentation at many flux sites has been amended for these gases. However, the application of EC over pastures is challenging due to the spatially and temporally uneven distribution of CH4 point sources induced by the grazing animals. We applied EC measurements during one grazing season over a pasture with 20 dairy cows (mean milk yield: 22.7 kg d-1) managed in a rotational grazing system. Individual cow positions were recorded by GPS trackers to attribute fluxes to animal emissions using a footprint model. Methane fluxes with cows in the footprint were up to 2 orders of magnitude higher than ecosystem fluxes without cows. Mean cow emissions of 423 ± 24 g CH4 head-1 d-1 (best estimate from this study) correspond well to animal respiration chamber measurements reported in the literature. However, a systematic effect of the distance between source and EC tower on cow emissions was found, which is attributed to the analytical footprint model used. We show that the EC method allows one to determine CH4 emissions of cows on a pasture if the data evaluation is adjusted for this purpose and if some cow distribution information is available.
NASA Astrophysics Data System (ADS)
Felber, R.; Münger, A.; Neftel, A.; Ammann, C.
2015-02-01
Methane (CH4) from ruminants contributes one third to global agricultural greenhouse gas emissions. Eddy covariance (EC) technique has been extensively used at various flux sites to investigate carbon dioxide exchange of ecosystems. Since the development of fast CH4 analysers the instrumentation at many flux sites have been amended for these gases. However the application of EC over pastures is challenging due to the spatial and temporal uneven distribution of CH4 point sources induced by the grazing animals. We applied EC measurements during one grazing season over a pasture with 20 dairy cows (mean milk yield: 22.7 kg d-1) managed in a rotational grazing system. Individual cow positions were recorded by GPS trackers to attribute fluxes to animal emissions using a footprint model. Methane fluxes with cows in the footprint were up to two orders of magnitude higher than ecosystem fluxes without cows. Mean cow emissions of 423 ± 24 g CH4 head-1 d-1 (best guess of this study) correspond well to animal respiration chamber measurements reported in the literature. However a systematic effect of the distance between source and EC tower on cow emissions was found which is attributed to the analytical footprint model used. We show that the EC method allows to determine CH4 emissions of grazing cows if the data evaluation is adjusted for this purpose and if some cow distribution information is available.
NASA Astrophysics Data System (ADS)
Placko, Dominique; Bore, Thierry; Rivollet, Alain; Joubert, Pierre-Yves
2015-10-01
This paper deals with the problem of imaging defects in metallic structures through eddy current (EC) inspections, and proposes an original process for a possible tomographical crack evaluation. This process is based on a semi analytical modeling, called "distributed point source method" (DPSM) which is used to describe and equate the interactions between the implemented EC probes and the structure under test. Several steps will be successively described, illustrating the feasibility of this new imaging process dedicated to the quantitative evaluation of defects. The basic principles of this imaging process firstly consist in creating a 3D grid by meshing the volume potentially inspected by the sensor. As a result, a given number of elemental volumes (called voxels) are obtained. Secondly, the DPSM modeling is used to compute an image for all occurrences in which only one of the voxels has a different conductivity among all the other ones. The assumption consists to consider that a real defect may be truly represented by a superimposition of elemental voxels: the resulting accuracy will naturally depend on the density of space sampling. On other hand, the excitation device of the EC imager has the capability to be oriented in several directions, and driven by an excitation current at variable frequency. So, the simulation will be performed for several frequencies and directions of the eddy currents induced in the structure, which increases the signal entropy. All these results are merged in a so-called "observation matrix" containing all the probe/structure interaction configurations. This matrix is then used in an inversion scheme in order to perform the evaluation of the defect location and geometry. The modeled EC data provided by the DPSM are compared to the experimental images provided by an eddy current imager (ECI), implemented on aluminum plates containing some buried defects. In order to validate the proposed inversion process, we feed it with computed images of various acquisition configurations. Additive noise was added to the images so that they are more representative of actual EC data. In the case of simple notch type defects, for which the relative conductivity may only take two extreme values (1 or 0), a threshold was introduced on the inverted images, in a post processing step, taking advantage of a priori knowledge of the statistical properties of the restored images. This threshold allowed to enhance the image contrast and has contributed to eliminate both the residual noise and the pixels showing non-realistic values.
Eddy current sensor for in-situ monitoring of swelling of Li-ion prismatic cells
DOE Office of Scientific and Technical Information (OSTI.GOV)
Plotnikov, Yuri, E-mail: plotnikov@ge.com; Karp, Jason, E-mail: plotnikov@ge.com; Knobloch, Aaron, E-mail: plotnikov@ge.com
2015-03-31
In-situ monitoring an on-board rechargeable battery in hybrid cars can be used to ensure a long operating life of the battery and safe operation of the vehicle. Intercalations of ions in the electrode material during charge and discharge of a Lithium Ion battery cause periodic stress and strain of the electrode materials that can ultimately lead to fatigue resulting in capacity loss and potential battery failure. Currently this process is not monitored directly on the cells. This work is focused on development technologies that would quantify battery swelling and provide in-situ monitoring for onboard vehicle applications. Several rounds of testsmore » have been performed to spatially characterize cell expansion of a 5 Ah cell with a nickel/manganese/cobalt-oxide cathode (Sanyo, Japan) used by Ford in their Fusion HEV battery pack. A collaborative team of researchers from GE and the University of Michigan has characterized the free expansion of these cells to be in the range of 100×125 microns (1% of total cell thickness) at the center point of the cell. GE proposed to use a thin eddy current (EC) coil to monitor these expansions on the cells while inside the package. The photolithography manufacturing process previously developed for EC arrays for detecting cracks in aircraft engine components was used to build test coils for gap monitoring. These sensors are thin enough to be placed safely between neighboring cells and capable of monitoring small variations in the gap between the cells. Preliminary investigations showed that these coils can be less than 100 micron thick and have sufficient sensitivity in a range from 0 to 2 mm. Laboratory tests revealed good correlation between EC and optical gap measurements in the desired range. Further technology development could lead to establishing a sensor network for a low cost solution for the in-situ monitoring of cell swelling during battery operation.« less
Eddy current sensor for in-situ monitoring of swelling of Li-ion prismatic cells
NASA Astrophysics Data System (ADS)
Plotnikov, Yuri; Karp, Jason; Knobloch, Aaron; Kapusta, Chris; Lin, David
2015-03-01
In-situ monitoring an on-board rechargeable battery in hybrid cars can be used to ensure a long operating life of the battery and safe operation of the vehicle. Intercalations of ions in the electrode material during charge and discharge of a Lithium Ion battery cause periodic stress and strain of the electrode materials that can ultimately lead to fatigue resulting in capacity loss and potential battery failure. Currently this process is not monitored directly on the cells. This work is focused on development technologies that would quantify battery swelling and provide in-situ monitoring for onboard vehicle applications. Several rounds of tests have been performed to spatially characterize cell expansion of a 5 Ah cell with a nickel/manganese/cobalt-oxide cathode (Sanyo, Japan) used by Ford in their Fusion HEV battery pack. A collaborative team of researchers from GE and the University of Michigan has characterized the free expansion of these cells to be in the range of 100×125 microns (1% of total cell thickness) at the center point of the cell. GE proposed to use a thin eddy current (EC) coil to monitor these expansions on the cells while inside the package. The photolithography manufacturing process previously developed for EC arrays for detecting cracks in aircraft engine components was used to build test coils for gap monitoring. These sensors are thin enough to be placed safely between neighboring cells and capable of monitoring small variations in the gap between the cells. Preliminary investigations showed that these coils can be less than 100 micron thick and have sufficient sensitivity in a range from 0 to 2 mm. Laboratory tests revealed good correlation between EC and optical gap measurements in the desired range. Further technology development could lead to establishing a sensor network for a low cost solution for the in-situ monitoring of cell swelling during battery operation.
NASA Astrophysics Data System (ADS)
Smidt, J.; Ingwersen, J.; Streck, T.
2015-12-01
The lack of energy balance closure is a long-standing problem in eddy covariance (EC) measurements. The energy balance equation is defined as Rn - G = H + λE, where Rn is net radiation, G is the ground heat flux, H is the sensible heat flux and λE is the latent heat flux. In most cases of energy imbalance, either Rn is overestimated or the ground heat and turbulent fluxes are underestimated. Multiple studies have shown that calculations, incorrect instrument installation/calibration and measurement errors alone do not entirely account for this imbalance. Rather, research is now focused on previously neglected sources of heat storage in the soil, biomass and air beneath the EC station. This project examined the potential of five "minor flux terms" - soil heat storage, biomass heat storage, energy consumption by photosynthesis, air heat storage and atmospheric moisture change, to further close the energy balance gap. Eddy covariance measurements were conducted at a maize (Zea mays) field in southwest Germany during summer 2014. Soil heat storage was measured for six weeks at 11 sites around the field footprint. Biomass and air heat storage were measured for six subsequent weeks at seven sites around the field footprint. Energy consumption by photosynthesis was calculated using the CO2 flux data. Evapotranspiration was calculated using the water balance method and then compared to the flux data processed with three post-closure methods: the sensible heat flux, the latent heat flux and the Bowen ratio post-closure methods. An energy balance closure of 66% was achieved by the EC station measurements over the entire investigation period. During the soil heat flux campaign, EC station closure was 74.1%, and the field footprint soil heat storage contributed 3.3% additional closure. During the second minor flux term measurement period, closure with the EC station data was 91%. Biomass heat storage resulted in 1.1% additional closure, the photosynthesis flux closed the gap by an additional 7.8%, air heat storage closure was -0.3% and atmospheric moisture change was negligible with an additional closure of <0.01%. These four terms resulted in a total additional closure of 8.6% over the EC station measurements. The Bowen Ratio post-closure method yielded values most similar to the water balance method over the entire season.
Effects of Eddy Viscosity on Time Correlations in Large Eddy Simulation
NASA Technical Reports Server (NTRS)
He, Guowei; Rubinstein, R.; Wang, Lian-Ping; Bushnell, Dennis M. (Technical Monitor)
2001-01-01
Subgrid-scale (SGS) models for large. eddy simulation (LES) have generally been evaluated by their ability to predict single-time statistics of turbulent flows such as kinetic energy and Reynolds stresses. Recent application- of large eddy simulation to the evaluation of sound sources in turbulent flows, a problem in which time, correlations determine the frequency distribution of acoustic radiation, suggest that subgrid models should also be evaluated by their ability to predict time correlations in turbulent flows. This paper compares the two-point, two-time Eulerian velocity correlation evaluated from direct numerical simulation (DNS) with that evaluated from LES, using a spectral eddy viscosity, for isotropic homogeneous turbulence. It is found that the LES fields are too coherent, in the sense that their time correlations decay more slowly than the corresponding time. correlations in the DNS fields. This observation is confirmed by theoretical estimates of time correlations using the Taylor expansion technique. Tile reason for the slower decay is that the eddy viscosity does not include the random backscatter, which decorrelates fluid motion at large scales. An effective eddy viscosity associated with time correlations is formulated, to which the eddy viscosity associated with energy transfer is a leading order approximation.
D. Marks; M. Reba; J. Pomeroy; T. Link; A. Winstral; G. Flerchinger; K. Elder
2008-01-01
During the second year of the NASA Cold Land Processes Experiment (CLPX), an eddy covariance (EC) system was deployed at the Local Scale Observation Site (LSOS) from mid-February to June 2003. The EC system was located beneath a uniform pine canopy, where the trees are regularly spaced and are of similar age and height. In an effort to evaluate the turbulent flux...
Conductivity tomography based on pulsed eddy current with SQUID magnetometer
NASA Astrophysics Data System (ADS)
Panaitov, G. I.; Krause, H.-J.; Zhang, Y.
2002-05-01
Pulsed eddy current (EC) techniques have the advantage of potentially covering a broader depth range than standard single frequency EC testing. We developed a novel pulsed EC technique using a liquid-nitrogen cooled SQUID magnetometer. For two reasons, SQUID magnetometers are particularly well suited as sensors: first they constitute an extremely sensitive magnetic field sensor, second they measure the field directly which decays more slowly than its time derivative picked up by induction coils. A square waveform transmitter signal was used, with alternating slopes in order to eliminate drift effect, and stacking synchronous to the power line frequency in order to improve signal-to-noise. The early time (high frequency) data of the recorded transient correspond to the upper layers of the conducting medium, while late time data or low frequencies deliver information on deep layers. Measurements of cracks at different depths in a stacked aluminum sample are presented. From the measured data, the apparent conductivity of the sample was calculated for each position and depth by applying a technique known from geophysical data interpretation. Thus, the position and depth of the crack was determined from the tomographic conductivity image of the sample.
Barbour, M M; Hunt, J E; Walcroft, A S; Rogers, G N D; McSeveny, T M; Whitehead, D
2005-02-01
Here we develop and test a method to scale sap velocity measurements from individual trees to canopy transpiration (E(c)) in a low-productivity, old-growth rainforest dominated by the conifer Dacrydium cupressinum. Further, E(c) as a component of the ecosystem water balance is quantified in relation to forest floor evaporation rates and measurements of ecosystem evaporation using eddy covariance (E(eco)) in conditions when the canopy was dry and partly wet. Thermal dissipation probes were used to measure sap velocity of individual trees, and scaled to transpiration at the canopy level by dividing trees into classes based on sapwood density and canopy position (sheltered or exposed). When compared with ecosystem eddy covariance measurements, E(c) accounted for 51% of E(eco) on dry days, and 22% of E(eco) on wet days. Low transpiration rates, and significant contributions to E(eco) from wet canopy evaporation and understorey transpiration (35%) and forest floor evaporation (25%), were attributable to the unique characteristics of the forest: in particular, high rainfall, low leaf area index, low stomatal conductance and low productivity associated with severe nutrient limitation.
NEON's eddy-covariance: interoperable flux data products, software and services for you, now
NASA Astrophysics Data System (ADS)
Metzger, S.; Desai, A. R.; Durden, D.; Hartmann, J.; Li, J.; Luo, H.; Durden, N. P.; Sachs, T.; Serafimovich, A.; Sturtevant, C.; Xu, K.
2017-12-01
Networks of eddy-covariance (EC) towers such as AmeriFlux, ICOS and NEON are vital for providing the necessary distributed observations to address interactions at the soil-vegetation-atmosphere interface. NEON, close to full operation with 47 tower sites, will represent the largest single-provider EC network globally. Its standardized observation and data processing suite is designed specifically for inter-site comparability and analysis of feedbacks across multiple spatial and temporal scales. Furthermore, NEON coordinates EC with rich contextual observations such as airborne remote sensing and in-situ sampling bouts. In January 2018 NEON enters its operational phase, and EC data products, software and services become fully available to the science community at large. These resources strive to incorporate lessons-learned through collaborations with AmeriFlux, ICOS, LTER and others, to suggest novel systemic solutions, and to synergize ongoing research efforts across science communities. Here, we present an overview of the ongoing product release, alongside efforts to integrate and collaborate with existing infrastructures, networks and communities. Near-real-time heat, water and carbon cycle observations in "basic" and "expanded", self-describing HDF5 formats become accessible from the NEON Data Portal, including an Application Program Interface. Subsequently, they are ingested into the AmeriFlux processing pipeline, together with inclusion in FLUXNET globally harmonized data releases. Software for reproducible, extensible and portable data analysis and science operations management also becomes available. This includes the eddy4R family of R-packages underlying the data product generation, together with the ability to directly participate in open development via GitHub version control and DockerHub image hosting. In addition, templates for science operations management include a web-based field maintenance application and a graphical user interface to simplify problem tracking and resolution along the entire data chain. We hope that this presentation can initiate further collaboration and synergies in challenge areas, and would appreciate input and discussion on continued development.
Storage flux uncertainty impact on eddy covariance net ecosystem exchange measurements
NASA Astrophysics Data System (ADS)
Nicolini, Giacomo; Aubinet, Marc; Feigenwinter, Christian; Heinesch, Bernard; Lindroth, Anders; Mamadou, Ossénatou; Moderow, Uta; Mölder, Meelis; Montagnani, Leonardo; Rebmann, Corinna; Papale, Dario
2017-04-01
Complying with several assumption and simplifications, most of the carbon budget studies based on eddy covariance (EC) measurements, quantify the net ecosystem exchange (NEE) by summing the flux obtained by EC (Fc) and the storage flux (Sc). Sc is the rate of change of CO2, within the so called control volume below the EC measurement level, given by the difference in the instantaneous profiles of concentration at the beginning and end of the EC averaging period, divided by the averaging period. While cumulating over time led to a nullification of Sc, it can be significant at short time periods. The approaches used to estimate Sc fluxes largely vary, from measurements based only on a single sampling point (usually located at the EC measurement height) to measurements based on several sampling profiles distributed within the control volume. Furthermore, the number of sampling points within each profile vary, according to their height and the ecosystem typology. It follows that measurement accuracy increases with the sampling intensity within the control volume. In this work we use the experimental dataset collected during the ADVEX campaign in which Sc flux has been measured in three similar forest sites by the use of 5 sampling profiles (towers). Our main objective is to quantify the impact of Sc measurement uncertainty on NEE estimates. Results show that different methods may produce substantially different Sc flux estimates, with problematic consequences in case high frequency (half-hourly) data are needed for the analysis. However, the uncertainty on long-term estimates may be tolerate.
NASA Astrophysics Data System (ADS)
Gwate, O.; Mantel, Sukhmani K.; Palmer, Anthony R.; Gibson, Lesley A.
2016-10-01
Determining water and carbon fluxes over a vegetated surface is important in a context of global environmental changes and the fluxes help in understanding ecosystem functioning. Pursuant to this, the study measured evapotranspiration (ET) using an eddy covariance (EC) system installed over an intact example of the Albany Thicket (AT) vegetation in the Eastern Cape, South Africa. Environmental constraints to ET were also assessed by examining the response of ET to biotic and abiotic factors. The EC system comprised of an open path Infrared Gas Analyser and Sonic anemometer and an attendant weather station to measure bi-meteorological variables. Post processing of eddy covariance data was conducted using EddyPro software. Quality assessment of fluxes was also performed and rejected and missing data were filled using the method of mean diurnal variations (MDV). Much of the variation in ET was accounted for by the leaf area index (LAI, p < 0.001, 41%) and soil moisture content (SWC, p < 0.001, 32%). Total measured ET during the experiment was greater than total rainfall received owing to the high water storage capacity of the vegetation and the possibility of vegetation accessing ground water. Most of the net radiation was consumed by sensible heat flux and this means that ET in the area is essentially water limited since abundant energy was available to drive turbulent transfers of energy. Understanding the environmental constraints to ET is crucial in predicting the ecosystem response to environmental forces such as climate change.
NASA Astrophysics Data System (ADS)
Vogl, Teresa; Hrdina, Amy; Thomas, Christoph
2016-04-01
The traditional eddy covariance (EC) technique requires the use of fast responding sensors (≥ 10 Hz) that do not exist for many chemical species found in the atmosphere. In this case, the Relaxed Eddy Accumulation (REA) method offers a means to calculate fluxes of trace gases and other scalar quantities (Businger and Oncley, 1990) and was originally derived from the eddy accumulation method (EA) first proposed by Desjardins (1972). While REA lessens the requirements for sensors and sampling and thus offers practical appeal, it introduces a dependence of the computed flux from a proportionality factor β. The accuracy of the REA fluxes hinges upon the correct determination of β, which was found to vary between 0.40 and 0.63 (Milne et al., 1999, Ammann and Meixner, 2002, Ruppert et al., 2006). However, formulating a universally valid parameterization for β instead of empirical evaluation has remained a conundrum and has been a main limitation for REA. In this study we take a fresh look at the dependencies and mathematical models of β by analyzing eddy covariance (EC) data and REA simulations for two field experiments in drastically contrasting environments: an exclusively physically driven environment in the Dry Valleys of Antarctica, and a biologically active system in a grassland in Germany. The main objective is to work toward a model parameterization for β that can be applied over wide range of surface conditions and forcings without the need for empirical evaluation, which is not possible for most REA applications. Our study discusses two different models to define β: (i) based upon scalar-scalar similarity, in which a different scalar is measured with fast-response sensors as a proxy for the scalar of interest, here referred to as β0; and (ii) computed solely from the vertical wind statistics, assuming a linear relationship between the scalar of interest and the vertical wind speed, referred to as βw. Results are presented for the carbon-dioxide, latent and sensible heat fluxes across the contrasting environments. First, the choice of an appropriate scalar to calculate β0 is discussed considering the sources and sinks of each scalar with an emphasis on the carbon dioxide flux, which shows strongly dissimilar dynamics between the Antarctic ecosystem and the grassland. Secondly, the impact of atmospheric stability on both β models is investigated. In a next step, we attempt to find a physically meaningful explanation for the overestimation of the REA scalar fluxes compared to those from EC for using βw. We do so by analyzing the probability density function (pdf) and its statistical moments for the vertical wind speed. We found its pdf to be non-Gaussian for the majority of cases, and detected a close to linear relationship of its kurtosis with βw. Finally, in an attempt to provide practical guidance for field measurements, we integrate our findings and propose an enhanced model parameterization, and evaluate the differences between our new model and a constant β. Ammann, C. and Meixner, F.X. (2002) Stability dependence of the relaxed eddy accumulation coefficient for various scalar quantities. J. Geophys. Res. 107. ACL7.1-ACL7.9 doi:10.1029/2001JD000649 Businger, J.A., Oncley, S.P. (1990) Flux measurement with conditional sampling. J. Atmos. Ocean. Tech. 7:349-352. Desjardins, R. L. (1972) A study of carbon-dioxide and sensible heat fluxes using the eddy correlation technique, Ph.D. dissertation, Cornell University, 189 pp. Desjardins, R.L. (1977) Description and evaluation of sensible heat flux detector. Boundary-Layer Meteorol. 11:147-154. Katul, G., Finkelstein, P. L., Clarke, J. F., and Ellestad, T. G. (1996) An Investigation of the Conditional Sampling Methods Used to Estimate Fluxes of Active, Reactive and Passive Scalars. J. Appl. Meteorol. 35: 1835-1845. Milne, R., Beverland, I. J., Hargreaves, K., and Moncrieff, J. B. (1999) Variation of the beta coefficient in the relaxed eddy accumulation method. Boundary-Layer Meteorol. 93: 211-225. Ruppert, J. ATEM software for atmospheric turbulent exchange measurements using eddy covariance and relaxed eddy accumulation systems: Bayreuth whole-air REA system setup, Universität Bayreuth, Abt. Mikrometeorologie, Print, ISSN 1614-8916, Arbeitsergebnisse 28, 29 S, 2005 Ruppert, J., Thomas, C., and Foken, T. (2006) scalar similarity for relaxed eddy accumulation methods. Boundary-Layer Meteorol. 120: 39-63.
NASA Astrophysics Data System (ADS)
Schulze, Martin H.; Heuer, Henning
2012-04-01
Carbon fiber based materials are used in many lightweight applications in aeronautical, automotive, machine and civil engineering application. By the increasing automation in the production process of CFRP laminates a manual optical inspection of each resin transfer molding (RTM) layer is not practicable. Due to the limitation to surface inspection, the quality parameters of multilayer 3 dimensional materials cannot be observed by optical systems. The Imaging Eddy- Current (EC) NDT is the only suitable inspection method for non-resin materials in the textile state that allows an inspection of surface and hidden layers in parallel. The HF-ECI method has the capability to measure layer displacements (misaligned angle orientations) and gap sizes in a multilayer carbon fiber structure. EC technique uses the variation of the electrical conductivity of carbon based materials to obtain material properties. Beside the determination of textural parameters like layer orientation and gap sizes between rovings, the detection of foreign polymer particles, fuzzy balls or visualization of undulations can be done by the method. For all of these typical parameters an imaging classification process chain based on a high resolving directional ECimaging device named EddyCus® MPECS and a 2D-FFT with adapted preprocessing algorithms are developed.
Measurements of Forest-Atmosphere Isotopic CO2 Exchange by Eddy Covariance
NASA Astrophysics Data System (ADS)
Wehr, R. A.; Munger, J. W.; Nelson, D. D.; McManus, J. B.; Zahniser, M. S.; Saleska, S. R.
2010-12-01
Isotopic CO2 flux measurements are a promising means for partitioning the net ecosystem exchange of CO2 into photosynthetic and respiratory components. This approach to partitioning is possible in principle because of the distinct isotopic signatures of respired and photosynthesized CO2, but has been infeasible in practice—especially in forests—because of the difficulty of measuring isotopic ratios with sufficient precision and time response for use in eddy covariance (EC) flux calculations. Recent advances in laser spectroscopic instrumentation have changed that. We report measurements of isotopic (13C and 18O) CO2 exchange made by eddy covariance at Harvard Forest between April and December, 2010. The measurements were made using a continuous-wave quantum cascade laser spectrometer (Aerodyne Research Inc.) sampling at 4 Hz and are, to our knowledge, the first EC isotopic flux measurements at a forest site. The spectrometer can measure δ13C and δ18O with internal precisions (standard deviation of 1-minute averages) of 0.03 ‰, and [CO2] with an internal precision of 15 ppb; the instrumental accuracy, calibration, and long-term stability are discussed in detail. The isotopic data are considered in relation to environmental variables (PAR, temperature, humidity, soil temperature and moisture), and a first attempt at flux partitioning using the isotopic fluxes is presented.
NASA Astrophysics Data System (ADS)
Evett, S. R.; Gowda, P. H.; Marek, G. W.; Alfieri, J. G.; Kustas, W. P.; Brauer, D. K.
2014-12-01
Evapotranspiration (ET) may be measured by mass balance methods and estimated by flux sensing methods. The mass balance methods are typically restricted in terms of the area that can be represented (e.g., surface area of weighing lysimeter (LYS) or equivalent representative area of neutron probe (NP) and soil core sampling techniques), and can be biased with respect to ET from the surrounding area. The area represented by flux sensing methods such as eddy covariance (EC) is typically estimated with a flux footprint/source area model. The dimension, position of, and relative contribution of upwind areas within the source area are mainly influenced by sensor height, wind speed, atmospheric stability and wind direction. Footprints for EC sensors positioned several meters above the canopy are often larger than can be economically covered by mass balance methods. Moreover, footprints move with atmospheric conditions and wind direction to cover different field areas over time while mass balance methods are static in space. Thus, EC systems typically sample a much greater field area over time compared with mass balance methods. Spatial variability of surface cover can thus complicate interpretation of flux estimates from EC systems. The most commonly used flux estimation method is EC; and EC estimates of latent heat energy (representing ET) and sensible heat fluxes combined are typically smaller than the available energy from net radiation and soil heat flux (commonly referred to as lack of energy balance closure). Reasons for this are the subject of ongoing research. We compare ET from LYS, NP and EC methods applied to field crops for three years at Bushland, Texas (35° 11' N, 102° 06' W, 1170 m elevation above MSL) to illustrate the potential problems with and comparative advantages of all three methods. In particular, we examine how networks of neutron probe access tubes can be representative of field areas large enough to be equivalent in size to EC footprints, and how the ET data from these methods can address bias and accuracy issues.
Constraining Night Time Ecosystem Respiration by Inverse Approaches
NASA Astrophysics Data System (ADS)
Juang, J.; Stoy, P. C.; Siqueira, M. B.; Katul, G. G.
2004-12-01
Estimating nighttime ecosystem respiration remains a key challenge in quantifying ecosystem carbon budgets. Currently, nighttime eddy-covariance (EC) flux measurements are plagued by uncertainties often attributed to poor mixing within the canopy volume, non-turbulent transport of CO2 into and out of the canopy, and non-stationarity and intermittency. Here, we explore the use of second-order closure models to estimate nighttime ecosystem respiration by mathematically linking sources of CO2 to mean concentration profiles via the continuity and the CO2 flux budget equation modified to include thermal stratification. By forcing this model to match, in a root-mean squared sense, the nighttime measured mean CO2 concentration profiles within the canopy the above ground CO2 production and forest floor respiration can be estimated via multi-dimensional optimization techniques. We show that in a maturing pine and a mature hardwood forest, these optimized CO2 sources are (1) consistently larger than the eddy covariance flux measurements above the canopy, and (2) agree well with chamber-based measurements. We also show that by linking the optimized nighttime ecosystem respiration to temperature measurements, the estimated annual ecosystem respiration from this approach agrees well with biometric estimates, at least when compared to eddy-covariance methods conditioned on a friction velocity threshold. The difference between the annual ecosystem respiration obtained by this optimization method and the friction-velocity thresholded night-time EC fluxes can be as large as 700 g C m-2 (in 2003) for the maturing pine forest, which is about 40% of the ecosystem respiration. For 2001 and 2002, the annual ecosystem respiration differences between the EC-based and the proposed approach were on the order of 300 to 400 g C m-2.
Flux Measurements of Trace Gases, Aerosols and Energy from the Urban Core of Mexico City
NASA Astrophysics Data System (ADS)
Velasco, E.; Molina, L.; Lamb, B.; Pressley, S.; Grivicke, R.; Westberg, H.; Jobson, T.; Allwine, E.; Coons, T.; Jimenez, J.; Nemitz, E.; Alexander, L. M.; Worsnop, D.; Ramos, R.
2007-05-01
As part of the MILAGRO field campaign in March 2006 we deployed a flux system in a busy district of Mexico City surrounded by congested avenues. The flux system consisted of a tall tower instrumented with fast-response sensors coupled with eddy covariance (EC) techniques to measure fluxes of volatile organic compounds (VOCs), CO2, CO, aerosols and energy. The measured fluxes represent direct measurements of emissions that include all major and minor emission sources from a typical residential and commercial district. In a previous study we demonstrated that the EC techniques are valuable tools to evaluate emissions inventories in urban areas, and understand better the atmospheric chemistry and the role that megacities play in global change. We measured fluxes of olefins using a Fast Olefin Sensor (FOS) and the EC technique, fluxes of aromatic and oxygenated VOCs by Proton Transfer Reaction-Mass Spectroscopy (PTR-MS) and the disjunct eddy covariance (DEC) technique, fluxes of CO2 and H2O with an open path Infrared Gas Analyzer (IRGA) and the EC technique, fluxes of CO using a modified gradient method and a commercial CO instrument, and fluxes of aerosols (organics, nitrates and sulfates) using an Aerodyne Aerosol Mass Spectrometer (AMS) and the EC technique. In addition we used a disjunct eddy accumulation (DEA) system to extend the number of VOCs. This system collected whole air samples as function of the direction of the vertical wind component, and the samples were analyzed on site using gas chromatography / flame ionization detection (GC-FID). We also measured fluxes of sensible and latent heat by EC and the radiation components with a net radiometer. Overall, these flux measurements confirm the results of our previous flux measurements in Mexico City in terms of the magnitude, composition, and distribution. We found that the urban surface is a net source of CO2 and VOCs. The diurnal patterns show clear anthropogenic signatures, with important contributions from vehicular traffic. The DEA results for individual hydrocarbons show that the alkane fluxes are considerably higher than alkene fluxes, which is consistent with ambient concentration measurements and with the emission inventory for Mexico City. CO fluxes, estimated from a modified gradient technique, were more than 10% of the measured CO2 fluxes (on a molar basis) which is much higher than is generally expected for combustion efficiencies in mobile and other sources. Investigation of this result is underway. The energy balance distribution and radiative parameters observed are similar to distributions and parameters reported for other urban sites.
NASA Astrophysics Data System (ADS)
Felber, Raphael; Neftel, Albrecht; Münger, Andreas; Ammann, Christof
2014-05-01
The eddy covariance (EC) technique has been extensively used for CO2 and energy exchange measurements over different ecosystems. For some years, it has been also becoming widely used to investigate CH4 and N2O exchange over ecosystems including grazing systems. EC measurements represent a spatially integrated flux over an upwind area (footprint). Whereas for extended homogenous areas EC measurements work well, the animals in a grazing system are a challenge as they represent moving point sources that create inhomogeneous conditions in space and time. The main issues which have to be taken into account when applying EC flux measurements over a grazed system are: i) In the presence of animals the high time resolution concentration measurements show large spikes in the signal. These spikes may be filtered/reduced by standard quality control software in order to avoid wrong measurements. ii) Data on the position of the animals relative to the flux footprint is needed to quantify the contribution of the grazing animals to the measured flux. For one grazing season we investigated the ability of EC flux measurements to reliably quantify the contribution of the grazing animals to the CH4 and CO2 exchange over pasture systems. For this purpose, a field experiment with a herd of twenty dairy cows in a full-day rotational grazing system was carried out on the Swiss central plateau. Net CH4 and CO2 exchange of the pasture system was measured continuously by the eddy covariance technique (Sonic Anemometer HS-50, Gill Instruments Ltd; FGGA, Los Gatos Research Inc.). To quantify the contribution of the animals to the net flux, the position of the individual cows was recorded using GPS (5 s time resolution) on each animal. An existing footprint calculation tool (ART footprint tool) was adapted and CH4 emissions of the cows were calculated. CH4 emissions from cows could be used as a tracer to investigate the quality of the evaluation of the EC data, since the background exchange of CH4 was very small. Daily mean CH4 emissions compared well to emission values calculated based on animal weights and milk yields. Based on a corresponding quality analysis we investigated to which extent the presence of cows can be detected or missed in the CO2 exchange measurements. For CO2 a partitioning of the net flux was performed to separate the animal respiration flux from contributions of vegetation and soil (assimilation and respiration). The resulting animal related CO2 emissions showed a considerable scatter but scaled with the animal density in the EC footprint.
Surface renewal application and examination over different AmeriFlux landscapes
USDA-ARS?s Scientific Manuscript database
Some growing canopy or patchy forest sites may preclude optimal use of eddy covariance (EC) because their characteristics prevent consistent measurements in the inertial sublayer. Therefore, alternative flux measurement methods with the potential to measure in roughness sublayer are desirable. The s...
NASA Technical Reports Server (NTRS)
Piascik, Robert S.; Prosser, William H.
2011-01-01
The Director of the NASA Engineering and Safety Center (NESC), requested an independent assessment of the anomalous gaseous hydrogen (GH2) flow incident on the Space Shuttle Program (SSP) Orbiter Vehicle (OV)-105 during the Space Transportation System (STS)-126 mission. The main propulsion system (MPS) engine #2 GH2 flow control valve (FCV) LV-57 transition from low towards high flow position without being commanded. Post-flight examination revealed that the FCV LV-57 poppet had experienced a fatigue failure that liberated a section of the poppet flange. The NESC assessment provided a peer review of the computational fluid dynamics (CFD), stress analysis, and impact testing. A probability of detection (POD) study was requested by the SSP Orbiter Project for the eddy current (EC) nondestructive evaluation (NDE) techniques that were developed to inspect the flight FCV poppets. This report contains the findings and recommendations from the NESC assessment.
Why we need to estimate the sampling uncertainty of eddy covariance flux measurement?
NASA Astrophysics Data System (ADS)
Kim, W.; Seo, H. H.
2015-12-01
Fruitful studies on exchanges of energy, water and carbon dioxide between the atmosphere and terrestrial ecosystem has been produced under a global network (http://fluxnet.ornl.gov). The exchange is defined by a flux, and in traditional the flux is estimated with eddy covariance (EC) method as a mean flux F for 30-min or 1-hr, because no techniques have been established for a direct measurement of a momentary flux itself. Therefore, the exchange analysis with F is to paid attention to estimations of spatial or temporal mean, because the exchange estimated by arithmetic mean Fa might be inappropriate in terms of the sample F used in this averaging having nonidentical inherent quality within one another in accordance with different micrometeorological and ecophysiological conditions while those are measured by the same instruments. To overcome this issue, we propose the weighted mean Fw using a relative sampling uncertainty ɛ estimated by a sampling F and its uncertainty, and introduce Fw performance tested with EC measurements for various sites.
NASA Astrophysics Data System (ADS)
Khebbab, Mohamed; Feliachi, Mouloud; El Hadi Latreche, Mohamed
2018-03-01
In this present paper, a simulation of eddy current non-destructive testing (EC NDT) on unidirectional carbon fiber reinforced polymer is performed; for this magneto-dynamic formulation in term of magnetic vector potential is solved using finite element heterogeneous multi-scale method (FE HMM). FE HMM has as goal to compute the homogenized solution without calculating the homogenized tensor explicitly, the solution is based only on the physical characteristic known in micro domain. This feature is well adapted to EC NDT to evaluate defect in carbon composite material in microscopic scale, where the defect detection is performed by coil impedance measurement; the measurement value is intimately linked to material characteristic in microscopic level. Based on this, our model can handle different defects such as: cracks, inclusion, internal electrical conductivity changes, heterogeneities, etc. The simulation results were compared with the solution obtained with homogenized material using mixture law, a good agreement was found.
NASA Technical Reports Server (NTRS)
Piascik, Robert S.; Prosser, William H.
2011-01-01
The Director of the NASA Engineering and Safety Center (NESC), requested an independent assessment of the anomalous gaseous hydrogen (GH2) flow incident on the Space Shuttle Program (SSP) Orbiter Vehicle (OV)-105 during the Space Transportation System (STS)-126 mission. The main propulsion system (MPS) engine #2 GH2 flow control valve (FCV) LV-57 transition from low towards high flow position without being commanded. Post-flight examination revealed that the FCV LV-57 poppet had experienced a fatigue failure that liberated a section of the poppet flange. The NESC assessment provided a peer review of the computational fluid dynamics (CFD), stress analysis, and impact testing. A probability of detection (POD) study was requested by the SSP Orbiter Project for the eddy current (EC) nondestructive evaluation (NDE) techniques that were developed to inspect the flight FCV poppets. This report contains the Appendices to the main report.
NASA Astrophysics Data System (ADS)
Corona, R.; Montaldo, N.
2017-12-01
Mediterranean ecosystems are typically heterogeneous, with contrasting plant functional types (PFT, woody vegetation and grass) that compete for water use. Due to the complexity of these ecosystems there is still uncertainty on the estimate of the evapotranspiration (ET). Micrometerological measurements (e.g. eddy covariance method based, EC ) are widely used for ET estimate, but in heterogeneous systems one of the main assumption (surface homogeneity) is not preserved and the method may become less robust. In this sense, the coupled use of sap flow sensors for tree transpiration estimate, surface temperature sensors, remote sensing information for land surface characterization allow to estimate the ET components and the energy balances of the three main land surface components (woody vegetation, grass and bare soil), overtaking the EC method uncertainties. The experimental site of Orroli, in Sardinia (Italy), is a typical Mediterranean heterogeneous ecosystem, monitored from the University of Cagliari since 2003. With the intent to perform an intensive field campaign for the ET estimation, we verified the potentiality of coupling eddy covariance (EC) method, infrared sensors and thermal dissipation methods (i.e. sap flow technique) for tree transpiration estimate. As a first step 3 commercial sap flux sensors were installed in a wild olive clump where the skin temperature of one tree in the clump was monitored with an infrared transducer. Then, other 54 handmade sensors were installed in 14 clumps in the EC footprint. Measurements of diameter were recorded in all the clumps and the sapwood depth was derived from measurements in several trees. The field ET estimation from the 4 commercial sensors was obtained assuming 4 different relationship between the monitored sap flux and the diameter of the species in the footprint. Instead for the 54 handmade sensors a scaling procedure was applied based on the allometric relationships between sapwood area, diameter and canopy cover area within the EC footprint. Furthermore, the hydrologic relationships between soil moisture content and ET of woody vegetation has been computed from sap flux measurements. The ET components are well estimated, highlighting the strong water resistance of wild olive, which survive in drastic dry conditions, in contrast with grass species.
NASA Astrophysics Data System (ADS)
Ibrom, Andreas; Brümmer, Christian; Hensen, Arjan; van Asperen, Hella; Carter, Mette S.; Gasche, Rainer; Famulari, Daniela; Kutsch, Werner; Pilegaard, Kim; Ambus, Per
2014-05-01
Nitrous oxide (N2O) fluxes from soils are characterised by their high spatial and temporal variability. The fluxes depend on the availability of the substrates for nitrification and denitrification and soil physical and chemical conditions that control the metabolic microbial activity. The sporadic nature of the fluxes and their high sensitivity to alterations of the soil climate put very high demands on measurement approaches. Laser spectroscopy enables accurate and fast response detection of atmospheric N2O concentrations and is used for eddy covariance (EC) flux measurements. Alternatively N2O fluxes can be measured with chambers together with high precision analysers. Differences in the measurement approaches and system designs are expected to have a considerable influence on the accuracy of the flux estimation. This study investigates how three different eddy covariance systems perform in a situation of low N2O fluxes from a flat surface. Chamber flux measurements with differing chamber and analyser designs are used for comparison. In April 2013, the EU research infrastructure project InGOS (http://www.ingos-infrastructure.eu/) organised a campaign of N2O flux measurements in a willow plantation close to the Risø Campus of the Technical University of Denmark. The willow field was harvested in February 2013 and received mineral fertiliser equivalent to 120 kg N ha-1 before the campaign started. Three different eddy covariance systems took part in the campaign: two Aerodyne quantum cascade laser (QCL) based systems and one Los Gatos Research off-axis integrated-cavity-output spectroscopy (ICOS) system for N2O and CO. The sonic anemometers were all installed at 2 m height above the bare ground. Gill R3 type sonic anemometers were used with QCL systems and a Gil HS-50 with the ICOS system. The 10 Hz raw data were analysed with group specific softwares and procedures. The local conditions in the exceptionally cold and dry spring 2013 did not lead to large N2O flux rates. All three EC systems showed 30 min. flux values varying around zero nmol m-2 s-1. This noise was considerably lower in the EC systems that used QCL analysers. The maximum daily averages of the uncorrected fluxes from two of the EC systems reached 0.26 (ICOS/HS50) and 0.28 (QCL/R3) nmol m-2 s-1.Spectral correction increased the flux estimates up to, e.g., 180% equivalent to 0.54 nmol m-2 s-1. The flux estimates from the soil chambers were with one exception higher than the flux estimates obtained from the EC systems with highest daily averages ranging from 0.1 up to 2 nmol m-2 s-1. These large differences were unexpected, because at least two of the EC systems were shown to accurately measure fluxes at such higher levels at another InGOS campaign in a fertilised Scottish grazed meadow. We use spectral analysis to examine the raw data for the effects of sensor noise on the flux estimates and discuss strategies on how to correct or account for it. Furthermore possible causes for the observed differences between the observed EC and chamber flux estimates will be discussed.
Eddy-Covariance Observations and Large-Eddy-Simulations of Near-Shore Fluxes from Water Bodies
NASA Astrophysics Data System (ADS)
Bohrer, G.; Rey Sanchez, C.; Kenny, W.; Morin, T. H.
2017-12-01
Eddy covariance (EC) measurement techniques are increasingly used in the study of lakes and coastal ecosystems. The sharp water-shore transitions in energy forcing and surface roughness are challenging the validity of the EC approach at these sites. We discuss the results of two seasonal campaigns to measure CO2 and water-vapor fluxes in coastal environments - a small lake in Michigan, and the water over a coral reef in the Red, Sea, Israel. We show that in both environments, horizontal advection of CO2 and water vapor is responsible to a non-negligible component of the total flux to/from the water. We used a two-tower approach to measure fluxes from the water and from the shore and calculate the advection and flux divergence between the two. An empirical footprint model was used to filter the observations and keep only the times when interference from the shore-line transition is minimal. Observations of both vertical turbulent fluxes and advection were gapfilled with a neural-network model, based on their observed relationships with environmental forcing. Gap-filled observations were used to determine the seasonal net fluxes for the tow ecosystems. We used Large-Eddy Simulations (LES) to conduct a case study of airflow patterns associated with a small inland lake surrounded by forest (i.e. radius of lake only ten times the height of the forest). We combined LES outputs with scalar dispersion simulations to model potential biases in EC flux measurements due to the heterogeneity of surface fluxes and vertical advection. Our simulations show that the lake-to-forest transition can induce a non-zero vertical wind component, which will strongly affect the interpretation of wind and flux measurements. Furthermore, significant horizontal gradients of CO2 are generated by the forest carbon sink and lake carbon source, which are further transported by local roughness-induced circulation. We simulated six hypothetical flux tower locations along a downwind gradient at various heights and calculated the effects of both average vertical advection and average turbulent flux divergence of CO2 at each.
Comparison of methods for estimating evapotranspiration in a small rangeland catchment
USDA-ARS?s Scientific Manuscript database
Evapotranspiration (ET) was quantified for two rangeland vegetation types, aspen and sagebrush/grassland, over an eight year study period by comparing several approaches for estimating ET: eddy covariance systems (EC, available for only six years); soil water storage loss measured by time domain ref...
Naidjate, Mohammed; Helifa, Bachir; Feliachi, Mouloud; Lefkaier, Iben-Khaldoun; Heuer, Henning; Schulze, Martin
2017-08-31
This paper propose a new concept of an eddy current (EC) multi-element sensor for the characterization of carbon fiber-reinforced polymers (CFRP) to evaluate the orientations of plies in CFRP and the order of their stacking. The main advantage of the new sensors is the flexible parametrization by electronical switching that reduces the effort for mechanical manipulation. The sensor response was calculated and proved by 3D finite element (FE) modeling. This sensor is dedicated to nondestructive testing (NDT) and can be an alternative for conventional mechanical rotating and rectangular sensors.
Assessing diel variation of CH4 flux from rice paddies through temperature patterns
NASA Astrophysics Data System (ADS)
Centeno, Caesar Arloo R.; Alberto, Ma Carmelita R.; Wassmann, Reiner; Sander, Bjoern Ole
2017-10-01
The diel variation in methane (CH4) flux from irrigated rice was characterized during the dry and wet cropping seasons in 2013 and 2014 using the eddy covariance (EC) technique. The EC technique has the advantage of obtaining measurements of fluxes at an extremely high temporal resolution (10Hz), meaning it records 36,000 measurements per hour. The EC measurements can very well capture the temporal variations of the diel (both diurnal and nocturnal) fluxes of CH4 and the environmental factors (temperature, surface energy flux, and gross ecosystem photosynthesis) at 30-min intervals. The information generated by this technique is important to enhance our mechanistic understanding of the different factors affecting the landscape scale diel CH4 flux. Distinct diel patterns of CH4 flux were observed when the data were partitioned into different cropping periods (pre-planting, growth, and fallow). The temporal variations of the diel CH4 flux during the dry seasons were more pronounced than during the wet seasons because the latter had so much climatic disturbance from heavy monsoon rains and occasional typhoons. Pearson correlation analysis and Granger causality test were used to confirm if the environmental factors evaluated were not only correlated with but also Granger-causing the diel CH4 flux. Soil temperature at 2.5 cm depth (Ts 2.5 cm) can be used as simple proxy for predicting diel variations of CH4 fluxes in rice paddies using simple linear regression during both the dry and wet seasons. This simple site-specific temperature response function can be used for gap-filling CH4 flux data for improving the estimates of CH4 source strength from irrigated rice production.
Eddy Covariance measurements of stable isotopes (δD and δ18O) in water vapor
NASA Astrophysics Data System (ADS)
Braden-Behrens, Jelka; Knohl, Alexander
2017-04-01
Stable isotopes are a promising tool to enhance our understanding of ecosystem gas exchanges. Studying 18O and 2H in water vapour (H2Ov) can e.g. help partitioning evapotranspiration into its components. With recent developments in laser spectroscopy direct Eddy Covariance (EC) measurements for investigating fluxes of stable isotopologues became feasible. So far very few case studies have applied the EC method to measure stable isotopes in water vapor. We continuously measure fluxes of water vapor isotopologues with the EC method in a managed beech forest in Thuringia, Germany, since autumn 2015 using the following setup: An off-axis integrated cavity output water vapor isotope analyzer (WVIA, Los Gatos Research. Inc, USA) measures the water vapour concentration and its isotopic composition (δD and δ18O). The instrument, that was optimized for high flow rates (app. 4slpm) to generate high frequency (2Hz) measurements, showed sufficient precision with Allan Deviations of app. 0.12 ‰ for δD and 0.06 ‰ for δ18O for averaging periods of 100s. The instrument was calibrated hourly using a high-flow optimized version of the water vapor isotope standard source (WVISS, Los Gatos Research. Inc, USA) that provides water vapor with known isotopic composition for a large range of different concentrations. Our calibration scheme includes a near continuous concentration range calibration instead of a simple 2 or 3-point calibration to face the analyzers strong concentration dependency within a range of app. 6 000 to 16 000 ppm in winter and app. 8 000 to 23 000 ppm in summer. In the used setup, the high-flow and high-frequency optimized water vapor isotope analyzer (WVIA) showed suitable characteristics (Allan deviation and spectral energy distribution) to perform Eddy covariance measurements of stable isotopes in H2Ov. Thus, this novel instrument for EC measurements of water vapor isotopologues provides a new opportunity for studying the hydrological cycle in long-term observation networks like Fluxnet and ICOS.
Turbulent fluxes by "Conditional Eddy Sampling"
NASA Astrophysics Data System (ADS)
Siebicke, Lukas
2015-04-01
Turbulent flux measurements are key to understanding ecosystem scale energy and matter exchange, including atmospheric trace gases. While the eddy covariance approach has evolved as an invaluable tool to quantify fluxes of e.g. CO2 and H2O continuously, it is limited to very few atmospheric constituents for which sufficiently fast analyzers exist. High instrument cost, lack of field-readiness or high power consumption (e.g. many recent laser-based systems requiring strong vacuum) further impair application to other tracers. Alternative micrometeorological approaches such as conditional sampling might overcome major limitations. Although the idea of eddy accumulation has already been proposed by Desjardin in 1972 (Desjardin, 1977), at the time it could not be realized for trace gases. Major simplifications by Businger and Oncley (1990) lead to it's widespread application as 'Relaxed Eddy Accumulation' (REA). However, those simplifications (flux gradient similarity with constant flow rate sampling irrespective of vertical wind velocity and introduction of a deadband around zero vertical wind velocity) have degraded eddy accumulation to an indirect method, introducing issues of scalar similarity and often lack of suitable scalar flux proxies. Here we present a real implementation of a true eddy accumulation system according to the original concept. Key to our approach, which we call 'Conditional Eddy Sampling' (CES), is the mathematical formulation of conditional sampling in it's true form of a direct eddy flux measurement paired with a performant real implementation. Dedicated hardware controlled by near-real-time software allows full signal recovery at 10 or 20 Hz, very fast valve switching, instant vertical wind velocity proportional flow rate control, virtually no deadband and adaptive power management. Demonstrated system performance often exceeds requirements for flux measurements by orders of magnitude. The system's exceptionally low power consumption is ideal for the field (one to two orders of magnitude lower compared to current closed-path laser based eddy covariance systems). Potential applications include fluxes of CO2, CH4, N2O, VOCs and other tracers. Finally we assess the flux accuracy of the Conditional Eddy Sampling (CES) approach as in our real implementation relative to alternative techniques including eddy covariance (EC) and relaxed eddy accumulation (REA). We further quantify various sources of instrument and method specific measurement errors. This comparison uses real measurements of 20 Hz turbulent time series of 3D wind velocity, sonic temperature and CO2 mixing ratio over a mixed decidious forest at the 'ICOS' flux tower site 'Hainich', Germany. Results from a simulation using real wind and CO2 timeseries from the Hainich site from 30 April to 3 November 2014 and real instrument performance suggest that the maximum flux estimates error (50% and 75% error quantiles) from Conditional Eddy Sampling (CES) relative to the true flux is 1.3% and 10%, respectively for monthly net fluxes, 1.6% and 7%, respectively for daily net fluxes and 8% and 35%, respectively for 30-minute CO2 flux estimates. Those results from CES are promising and outperform our REA estimates by about a factor of 50 assuming REA with constant b value. Results include flux time series from the EC, CES and REA approaches from 30-min to annual resolution.
Determination of linear defect depths from eddy currents disturbances
NASA Astrophysics Data System (ADS)
Ramos, Helena Geirinhas; Rocha, Tiago; Pasadas, Dário; Ribeiro, Artur Lopes
2014-02-01
One of the still open problems in the inspection research concerns the determination of the maximum depth to which a surface defect goes. Eddy current testing being one of the most sensitive well established inspection methods, able to detect and characterize different type of defects in conductive materials, is an adequate technique to solve this problem. This paper reports a study concerning the disturbances in the magnetic field and in the lines of current due to a machined linear defect having different depths in order to extract relevant information that allows the determination of the defect characteristics. The image of the eddy currents (EC) is paramount to understand the physical phenomena involved. The EC images for this study are generated using a commercial finite element model (FLUX). The excitation used produces a uniform magnetic field on the plate under test in the absence of defects and the disturbances due to the defects are compared with those obtained from experimental measurements. In order to increase the limited penetration depth of the method giant magnetoresistors (GMR) are used to lower the working frequency. The geometry of the excitation planar coil produces a uniform magnetic field on an area of around the GMR sensor, inducing a uniform eddy current distribution on the plate. In the presence of defects in the material surface, the lines of currents inside the material are deviated from their uniform direction and the magnetic field produced by these currents is sensed by the GMR sensor. Besides the theoretical study of the electromagnetic system, the paper describes the experiments that have been carried out to support the theory and conclusions are drawn for cracks having different depths.
NASA Astrophysics Data System (ADS)
Lan, C. Y.; Li, M. H.; Chen, Y. Y.
2016-12-01
Appropriate estimations of gaps appeared in eddy covariance (EC) flux observations are critical to the reliability of long-term EC applications. In this study we present a semi-parametric multivariate gap-filling model for tower-based measurement of CO2 flux. The raw EC data passing QC/QA was separated into two groups, clear sky, having net radiation greater than 50 W/m2, and nighttime/cloudy. For the clear sky conditions, the principle component analysis (PCA) was used to resolve the multicollinearity relationships among various environmental variables, including net radiation, wind speed, vapor pressure deficit, soil moisture deficit, leaf area index, and soil temperature, in association with CO2 assimilated by forest. After the principal domains were determined by the PCA, the relationships between CO2 fluxes and selected PCs (key factors) were built up by nonlinear interpolations to estimate the gap-filled CO2 flux. In view of limited photosynthesis at nighttime/cloudy conditions, respiration rate of the forest ecosystem was estimated by the Lloyd-Tylor equation. Artificial gaps were randomly selected to exam the applicability of our PCA approach. Based on tower-based measurement of CO2 flux at the Lien-Hua-Chih site, a total of 5.8 ton-C/ha/yr was assimilated in 2012.
Sediment-water gas exchange in two Swedish lakes measured by Eddy Correlation
NASA Astrophysics Data System (ADS)
Kokic, J.; Sahlee, E.; Brand, A.; Sobek, S.
2014-12-01
Lake sediments are hotspots for carbon (C) cycling, acting both as sinks and sources through C burial and production of carbon dioxide (CO2) and methane. The fate of this CO2 in the water column is controlled by bottom water turbulence, a factor not accounted for in current estimates of sediment CO2 fluxes. This study is aimed to quantify the turbulent CO2 flux across the sediment-water interface (SWI) by measuring the oxygen (O2) flux with the non-invasive Eddy Correlation (EC) method that combines measurements of 3D velocity (ADV) and O2 fluctuations with a microsensor. Using the metabolic relation (respiratory quotient, RQ) of O2 and CO2 derived from a sediment incubation experiment we present the first estimates of turbulent lake sediment CO2 flux from two boreal lakes in Sweden (Erssjön and Erken, 0.07 km2 and 23.7 km2 respectively). Only ~10 % of the total dataset was extracted for flux calculations due to poor signal-to-noise ratio in the velocity and O2 signals. The sediment in Lake Erssjön was both consuming and producing O2, related to bacterial respiration and photosynthesis. Mean O2 flux was -0.19 and 0.17 μmol O2 m-2 sec-1, comparing to 0.04 μmol O2 m-2 sec-1 derived from the sediment incubation experiment. Fluxes for Lake Erken are still to be determined. Experimentally derived RQ of the both lake sediments were close to unity implying that in-situ CO2 fluxes are of similar magnitude as O2 fluxes, varying between -0.15 and 0.18 μmol C m-2 sec-1. The first measurement of turbulent sediment O2 flux and estimate of turbulent CO2 flux from a small boreal lake show higher and more variable fluxes than previously found in experimental studies. The low amount of data extracted for flux calculations (~10%) point towards the difficulties in EC measurement in low-turbulence environments. On-going work focuses on the turbulence structure in lakes and its influence on the gas fluxes at the SWI.
Anomalous CO2 Emissions in Different Ecosystems Around the World
NASA Astrophysics Data System (ADS)
Sanchez-Canete, E. P.; Moya Jiménez, M. R.; Kowalski, A. S.; Serrano-Ortiz, P.; López-Ballesteros, A.; Oyonarte, C.; Domingo, F.
2016-12-01
As an important tool for understanding and monitoring ecosystem dynamics at ecosystem level, the eddy covariance (EC) technique allows the assessment of the diurnal and seasonal variation of the net ecosystem exchange (NEE). Despite the high temporal resolution data available, there are still many processes (in addition to photosynthesis and respiration) that, although they are being monitored, have been neglected. Only a few authors have studied anomalous CO2 emissions (non biological), and have related them to soil ventilation, photodegradation or geochemical processes. The aim of this study is: 1) to identify anomalous short term CO2 emissions in different ecosystems distributed around the world, 2) to determine the meteorological variables that are influencing these emissions, and 3) to explore the potential processes that can be involved. We have studied EC data together with other meteorological ancillary variables obtained from the FLUXNET database (version 2015) and have found more than 50 sites with anomalous CO2 emissions in different ecosystem types such as grasslands, croplands or savannas. Data were filtered according to the FLUXNET quality control flags (only data with quality control flag equal to 0 was used) and correlation analysis were performed with NEE and ancillary data. Preliminary results showed strong and highly significant correlations between meteorological variables and anomalous CO2 emissions. Correlation results showed clear differing behaviors between ecosystems types, which could be related to the different processes involved in the anomalous CO2 emissions. We suggest that anomalous CO2 emissions are happening globally and therefore, their contribution to the global net ecosystem carbon balance requires further investigation in order to better understand its drivers.
New gap-filling and partitioning technique for H2O eddy fluxes measured over forests
NASA Astrophysics Data System (ADS)
Kang, Minseok; Kim, Joon; Malla Thakuri, Bindu; Chun, Junghwa; Cho, Chunho
2018-01-01
The continuous measurement of H2O fluxes using the eddy covariance (EC) technique is still challenging for forests because of large amounts of wet canopy evaporation (EWC), which occur during and following rain events when the EC systems rarely work correctly. We propose a new gap-filling and partitioning technique for the H2O fluxes: a model-statistics hybrid (MSH) method. It enables the recovery of the missing EWC in the traditional gap-filling method and the partitioning of the evapotranspiration (ET) into transpiration and (wet canopy) evaporation. We tested and validated the new method using the data sets from two flux towers, which are located at forests in hilly and complex terrains. The MSH reasonably recovered the missing EWC of 16-41 mm yr-1 and separated it from the ET (14-23 % of the annual ET). Additionally, we illustrated certain advantages of the proposed technique which enable us to understand better how ET responds to environmental changes and how the water cycle is connected to the carbon cycle in a forest ecosystem.
Value of eddy-covariance data for individual-based, forest gap models
NASA Astrophysics Data System (ADS)
Roedig, Edna; Cuntz, Matthias; Huth, Andreas
2014-05-01
Individual-based forest gap models simulate tree growth and carbon fluxes on large time scales. They are a well established tool to predict forest dynamics and successions. However, the effect of climatic variables on processes of such individual-based models is uncertain (e.g. the effect of temperature or soil moisture on the gross primary production (GPP)). Commonly, functional relationships and parameter values that describe the effect of climate variables on the model processes are gathered from various vegetation models of different spatial scales. Though, their accuracies and parameter values have not been validated for the specific model scales of individual-based forest gap models. In this study, we address this uncertainty by linking Eddy-covariance (EC) data and a forest gap model. The forest gap model FORMIND is applied on the Norwegian spruce monoculture forest at Wetzstein in Thuringia, Germany for the years 2003-2008. The original parameterizations of climatic functions are adapted according to the EC-data. The time step of the model is reduced to one day in order to adapt to the high resolution EC-data. The FORMIND model uses functional relationships on an individual level, whereas the EC-method measures eco-physiological responses at the ecosystem level. However, we assume that in homogeneous stands as in our study, functional relationships for both methods are comparable. The model is then validated at the spruce forest Waldstein, Germany. Results show that the functional relationships used in the model, are similar to those observed with the EC-method. The temperature reduction curve is well reflected in the EC-data, though parameter values differ from the originally expected values. For example at the freezing point, the observed GPP is 30% higher than predicted by the forest gap model. The response of observed GPP to soil moisture shows that the permanent wilting point is 7 vol-% lower than the value derived from the literature. The light response curve, integrated over the canopy and the forest stand, is underestimated compared to the measured data. The EC-method measures a yearly carbon balance of 13 mol(CO2)m-2 for the Wetzstein site. The model with the original parameterization overestimates the yearly carbon balance by nearly 5 mol(CO2)m-2 while the model with an EC-based parameterization fits the measured data very well. The parameter values derived from EC-data are applied on the spruce forest Waldstein and clearly improve estimates of the carbon balance.
Gerdel, Katharina; Spielmann, Felix Maximilian; Hammerle, Albin; Wohlfahrt, Georg
2017-01-01
The trace gas carbonyl sulphide (COS) has lately received growing interest in the eddy covariance (EC) community due to its potential to serve as an independent approach for constraining gross primary production and canopy stomatal conductance. Thanks to recent developments of fast-response high-precision trace gas analysers (e.g. quantum cascade laser absorption spectrometers (QCLAS)), a handful of EC COS flux measurements have been published since 2013. To date, however, a thorough methodological characterisation of QCLAS with regard to the requirements of the EC technique and the necessary processing steps has not been conducted. The objective of this study is to present a detailed characterization of the COS measurement with the Aerodyne QCLAS in the context of the EC technique, and to recommend best EC processing practices for those measurements. Data were collected from May to October 2015 at a temperate mountain grassland in Tyrol, Austria. Analysis of the Allan variance of high-frequency concentration measurements revealed sensor drift to occur under field conditions after an averaging time of around 50 s. We thus explored the use of two high-pass filtering approaches (linear detrending and recursive filtering) as opposed to block averaging and linear interpolation of regular background measurements for covariance computation. Experimental low-pass filtering correction factors were derived from a detailed cospectral analysis. The CO2 and H2O flux measurements obtained with the QCLAS were compared against those obtained with a closed-path infrared gas analyser. Overall, our results suggest small, but systematic differences between the various high-pass filtering scenarios with regard to the fraction of data retained in the quality control and flux magnitudes. When COS and CO2 fluxes are combined in the so-called ecosystem relative uptake rate, systematic differences between the high-pass filtering scenarios largely cancel out, suggesting that this relative metric represents a robust key parameter comparable between studies relying on different post-processing schemes. PMID:29093762
Gerdel, Katharina; Spielmann, Felix Maximilian; Hammerle, Albin; Wohlfahrt, Georg
2017-09-26
The trace gas carbonyl sulphide (COS) has lately received growing interest in the eddy covariance (EC) community due to its potential to serve as an independent approach for constraining gross primary production and canopy stomatal conductance. Thanks to recent developments of fast-response high-precision trace gas analysers (e.g. quantum cascade laser absorption spectrometers (QCLAS)), a handful of EC COS flux measurements have been published since 2013. To date, however, a thorough methodological characterisation of QCLAS with regard to the requirements of the EC technique and the necessary processing steps has not been conducted. The objective of this study is to present a detailed characterization of the COS measurement with the Aerodyne QCLAS in the context of the EC technique, and to recommend best EC processing practices for those measurements. Data were collected from May to October 2015 at a temperate mountain grassland in Tyrol, Austria. Analysis of the Allan variance of high-frequency concentration measurements revealed sensor drift to occur under field conditions after an averaging time of around 50 s. We thus explored the use of two high-pass filtering approaches (linear detrending and recursive filtering) as opposed to block averaging and linear interpolation of regular background measurements for covariance computation. Experimental low-pass filtering correction factors were derived from a detailed cospectral analysis. The CO 2 and H 2 O flux measurements obtained with the QCLAS were compared against those obtained with a closed-path infrared gas analyser. Overall, our results suggest small, but systematic differences between the various high-pass filtering scenarios with regard to the fraction of data retained in the quality control and flux magnitudes. When COS and CO 2 fluxes are combined in the so-called ecosystem relative uptake rate, systematic differences between the high-pass filtering scenarios largely cancel out, suggesting that this relative metric represents a robust key parameter comparable between studies relying on different post-processing schemes.
NASA Astrophysics Data System (ADS)
Gerdel, Katharina; Spielmann, Felix Maximilian; Hammerle, Albin; Wohlfahrt, Georg
2017-09-01
The trace gas carbonyl sulfide (COS) has lately received growing interest from the eddy covariance (EC) community due to its potential to serve as an independent approach for constraining gross primary production and canopy stomatal conductance. Thanks to recent developments of fast-response high-precision trace gas analysers (e.g. quantum cascade laser absorption spectrometers, QCLAS), a handful of EC COS flux measurements have been published since 2013. To date, however, a thorough methodological characterisation of QCLAS with regard to the requirements of the EC technique and the necessary processing steps has not been conducted. The objective of this study is to present a detailed characterisation of the COS measurement with the Aerodyne QCLAS in the context of the EC technique and to recommend best EC processing practices for those measurements. Data were collected from May to October 2015 at a temperate mountain grassland in Tyrol, Austria. Analysis of the Allan variance of high-frequency concentration measurements revealed the occurrence of sensor drift under field conditions after an averaging time of around 50 s. We thus explored the use of two high-pass filtering approaches (linear detrending and recursive filtering) as opposed to block averaging and linear interpolation of regular background measurements for covariance computation. Experimental low-pass filtering correction factors were derived from a detailed cospectral analysis. The CO2 and H2O flux measurements obtained with the QCLAS were compared with those obtained with a closed-path infrared gas analyser. Overall, our results suggest small, but systematic differences between the various high-pass filtering scenarios with regard to the fraction of data retained in the quality control and flux magnitudes. When COS and CO2 fluxes are combined in the ecosystem relative uptake rate, systematic differences between the high-pass filtering scenarios largely cancel out, suggesting that this relative metric represents a robust key parameter comparable between studies relying on different post-processing schemes.
NASA Astrophysics Data System (ADS)
Roedig, Edna; Cuntz, Matthias; Huth, Andreas
2015-04-01
The effects of climatic inter-annual fluctuations and human activities on the global carbon cycle are uncertain and currently a major issue in global vegetation models. Individual-based forest gap models, on the other hand, model vegetation structure and dynamics on a small spatial (<100 ha) and large temporal scale (>1000 years). They are well-established tools to reproduce successions of highly-diverse forest ecosystems and investigate disturbances as logging or fire events. However, the parameterizations of the relationships between short-term climate variability and forest model processes are often uncertain in these models (e.g. daily variable temperature and gross primary production (GPP)) and cannot be constrained from forest inventories. We addressed this uncertainty and linked high-resolution Eddy-covariance (EC) data with an individual-based forest gap model. The forest model FORMIND was applied to three diverse tropical forest sites in the Amazonian rainforest. Species diversity was categorized into three plant functional types. The parametrizations for the steady-state of biomass and forest structure were calibrated and validated with different forest inventories. The parameterizations of relationships between short-term climate variability and forest model processes were evaluated with EC-data on a daily time step. The validations of the steady-state showed that the forest model could reproduce biomass and forest structures from forest inventories. The daily estimations of carbon fluxes showed that the forest model reproduces GPP as observed by the EC-method. Daily fluctuations of GPP were clearly reflected as a response to daily climate variability. Ecosystem respiration remains a challenge on a daily time step due to a simplified soil respiration approach. In the long-term, however, the dynamic forest model is expected to estimate carbon budgets for highly-diverse tropical forests where EC-measurements are rare.
NASA Astrophysics Data System (ADS)
Meijide, A.; Manca, G.; Goded, I.; Magliulo, V.; di Tommasi, P.; Seufert, G.; Cescatti, A.
2011-09-01
Rice paddy fields are one of the greatest anthropogenic sources of methane (CH4), the third most important greenhouse gas after water vapour and carbon dioxide. In agricultural fields, CH4 is usually measured with the closed chamber technique, resulting in discontinuous series of measurements performed over a limited area, that generally do not provide sufficient information on the short-term variation of the fluxes. On the contrary, aerodynamic techniques have been rarely applied for the measurement of CH4 fluxes in rice paddy fields. The eddy covariance (EC) technique provides integrated continuous measurements over a large area and may increase our understanding of the underlying processes and diurnal and seasonal pattern of CH4 emissions in this ecosystem. For this purpose a Fast Methane Analyzer (Los Gatos Research Ltd.) was installed in an eddy-covariance field set-up in a rice paddy field in the Po Valley (Northern Italy). Methane fluxes were measured during the rice growing season, both with EC and with manually operated closed chambers. Methane fluxes were strongly influenced by the presence of the water table, with emissions peaking when it was above 10-12 cm. Further studies are required to evaluate if water table management could decrease CH4 emissions. The development of rice plants and soil temperature were also responsible of the seasonal variation on the fluxes. The EC measured showed a diurnal cycle in the emissions, which was more relevant during the vegetative period, and with CH4 emissions being higher in the late evening, possibly associated with higher water temperature. The comparison between both measurement techniques shows that greater fluxes are measured with the chambers, especially when higher fluxes are being produced, resulting in 30 % higher seasonal estimations with the chambers than with the EC (41.1 and 31.8 g CH4 m-2 measured with chambers and EC respectively). The differences may be a result of the combined effect of overestimation with the chambers, the possible underestimation by the EC technique and of not having considered the daily course of the fluxes for the calculation of seasonal emissions from chambers.
NASA Astrophysics Data System (ADS)
Grossel, Agnes; Bureau, Jordan; Loubet, Benjamin; Laville, Patricia; Massad, Raia; Haas, Edwin; Butterbach-Bahl, Klaus; Guimbaud, Christophe; Hénault, Catherine
2017-04-01
The objective of this study was to develop and evaluate an attribution method based on a combination of Eddy Covariance (EC) and chamber measurements to map N2O emissions over a 3-km2 area of croplands and forests in France. During 2 months of spring 2015, N2O fluxes were measured (i) by EC at 15 m height and (ii) punctually with a mobile chamber at 16 places within 1-km of EC mast. The attribution method was based on coupling the EC measurements, information on footprints (Loubet et al., 20101) and emission ratios based on crops and fertilizations, calculated based on chamber measurements. The results were evaluated against an independent flux dataset measured by automatic chambers in a wheat field within the area. At the landscape scale, the method estimated a total emission of 114-271 kg N-N2O during the campaign. This new approach allowed estimating continuously N2O emission and better accounting for the spatial variability of N2O emission at the landscape scale.
Benjamin N. Sulman; Daniel Tyler Roman; Todd M. Scanlon; Lixin Wang; Kimberly A. Novick
2016-01-01
The eddy covariance (EC) method is routinely used to measure net ecosystem fluxes of carbon dioxide (CO2) and evapotranspiration (ET) in terrestrial ecosystems. It is often desirable to partition CO2 flux into gross primary production (GPP) and ecosystem respiration (RE), and to partition ET into evaporation and...
NASA Astrophysics Data System (ADS)
Erkkilä, Kukka-Maaria; Ojala, Anne; Bastviken, David; Biermann, Tobias; Heiskanen, Jouni J.; Lindroth, Anders; Peltola, Olli; Rantakari, Miitta; Vesala, Timo; Mammarella, Ivan
2018-01-01
Freshwaters bring a notable contribution to the global carbon budget by emitting both carbon dioxide (CO2) and methane (CH4) to the atmosphere. Global estimates of freshwater emissions traditionally use a wind-speed-based gas transfer velocity, kCC (introduced by Cole and Caraco, 1998), for calculating diffusive flux with the boundary layer method (BLM). We compared CH4 and CO2 fluxes from BLM with kCC and two other gas transfer velocities (kTE and kHE), which include the effects of water-side cooling to the gas transfer besides shear-induced turbulence, with simultaneous eddy covariance (EC) and floating chamber (FC) fluxes during a 16-day measurement campaign in September 2014 at Lake Kuivajärvi in Finland. The measurements included both lake stratification and water column mixing periods. Results show that BLM fluxes were mainly lower than EC, with the more recent model kTE giving the best fit with EC fluxes, whereas FC measurements resulted in higher fluxes than simultaneous EC measurements. We highly recommend using up-to-date gas transfer models, instead of kCC, for better flux estimates. BLM CO2 flux measurements had clear differences between daytime and night-time fluxes with all gas transfer models during both stratified and mixing periods, whereas EC measurements did not show a diurnal behaviour in CO2 flux. CH4 flux had higher values in daytime than night-time during lake mixing period according to EC measurements, with highest fluxes detected just before sunset. In addition, we found clear differences in daytime and night-time concentration difference between the air and surface water for both CH4 and CO2. This might lead to biased flux estimates, if only daytime values are used in BLM upscaling and flux measurements in general. FC measurements did not detect spatial variation in either CH4 or CO2 flux over Lake Kuivajärvi. EC measurements, on the other hand, did not show any spatial variation in CH4 fluxes but did show a clear difference between CO2 fluxes from shallower and deeper areas. We highlight that while all flux measurement methods have their pros and cons, it is important to carefully think about the chosen method and measurement interval, as well as their effects on the resulting flux.
Wagle, Pradeep; Gowda, Prasanna H; Moorhead, Jerry E; Marek, Gary W; Brauer, David K
2018-05-08
Net ecosystem exchange (NEE) of carbon dioxide (CO 2 ) and water vapor (H 2 O) fluxes from irrigated grain sorghum (Sorghum bicolor L. Moench) and maize (Zea mays L.) fields in the Texas High Plains were quantified using the eddy covariance (EC) technique during 2014-2016 growing seasons and examined in terms of relevant controlling climatic variables. Eddy covariance measured evapotranspiration (ET EC ) was also compared against lysimeter measured ET (ET Lys ). Daily peak (7-day averages) NEE reached approximately -12 g C m -2 for sorghum and -14.78 g C m -2 for maize. Daily peak (7-day averages) ET EC reached approximately 6.5 mm for sorghum and 7.3 mm for maize. Higher leaf area index (5.7 vs 4-4.5 m 2 m -2 ) and grain yield (14 vs 8-9 t ha -1 ) of maize compared to sorghum caused larger magnitudes of NEE and ET EC in maize. Comparisons of ET EC and ET Lys showed a strong agreement (R 2 = 0.93-0.96), while the EC system underestimated ET by 15-24% as compared to lysimeter without any corrections or energy balance adjustments. Both NEE and ET EC were not inhibited by climatic variables during peak photosynthetic period even though diurnal peak values (~2-weeks average) of photosynthetic photon flux density (PPFD), air temperature (T a ), and vapor pressure deficit (VPD) had reached over 2000 μmol m -2 s -1 , 30 °C, and 2.5 kPa, respectively, indicating well adaptation of both C 4 crops in the Texas High Plains under irrigation. However, more sensitivity of NEE and H 2 O fluxes beyond threshold T a and VPD for maize than for sorghum indicated higher adaptability of sorghum for the region. These findings provide baseline information on CO 2 fluxes and ET for a minimally studied grain sorghum and offer a robust geographic comparison for maize outside the United States Corn Belt. However, longer-term measurements are required for assessing carbon and water dynamics of these globally important agro-ecosystems. Copyright © 2018. Published by Elsevier B.V.
Gritti, Fabrice; Guiochon, Georges
2012-08-24
As part of an investigation of the column-to-column repeatability of the efficiency of columns packed with sub-3μm shell particles, the parameters of the mass transfer kinetics of twelve columns packed with the same batch of 2.7μm Poroshell 120 EC-C(18) particles (Agilent Technologies, Little Fall, DE, USA) were sequentially measured, using columns provided by the manufacturers that were representative of the efficiency distribution given by the quality test control. The reduced longitudinal diffusion term (B) was measured using the peak parking (PP) method; the reduced solid-liquid mass transfer resistance term (C) was given by a combination of the PP results and the most accurate model of effective diffusion in ternary composite materials. The overall eddy diffusion term (A) was obtained by subtraction of these two HETP terms from the overall reduced HETP derived from the peak moments measured by numerical integration of the entire peak profiles. The results demonstrate that the dispersion of the column efficiencies is a result of the random nature of the packing process and the eddy diffusion term resulting from the lack of homogeneity of the column bed. At the highest reduced velocity achieved for small analytes, the relative standard deviations (RSD) of the eddy diffusion term for the 2.1mm I.D. columns were ca. 3 and 11% (with average values h(eddy)= 2.5 and 13.5) for naphthalene (k=3) and uracil (k=0), respectively. For the 4.6mm I.D. columns, these RSDs were 5 and 13%, respectively, with average values h(eddy)= 1.4 and 2.9. For insulin at reduced velocities as high as 160, the RSDs of the total reduced plate heights were 3 and 8% for the 2.1 and 4.6mm I.D. columns, respectively. Copyright © 2012 Elsevier B.V. All rights reserved.
Eddy Correlation Flux Measurement System (ECOR) Handbook
DOE Office of Scientific and Technical Information (OSTI.GOV)
Cook, DR
2011-01-31
The eddy correlation (ECOR) flux measurement system provides in situ, half-hour measurements of the surface turbulent fluxes of momentum, sensible heat, latent heat, and carbon dioxide (CO2) (and methane at one Southern Great Plains extended facility (SGP EF) and the North Slope of Alaska Central Facility (NSA CF). The fluxes are obtained with the eddy covariance technique, which involves correlation of the vertical wind component with the horizontal wind component, the air temperature, the water vapor density, and the CO2 concentration.
Using eddy currents for noninvasive in vivo pH monitoring for bone tissue engineering.
Beck-Broichsitter, Benedicta E; Daschner, Frank; Christofzik, David W; Knöchel, Reinhard; Wiltfang, Jörg; Becker, Stephan T
2015-03-01
The metabolic processes that regulate bone healing and bone induction in tissue engineering models are not fully understood. Eddy current excitation is widely used in technical approaches and in the food industry. The aim of this study was to establish eddy current excitation for monitoring metabolic processes during heterotopic osteoinduction in vivo. Hydroxyapatite scaffolds were implanted into the musculus latissimus dorsi of six rats. Bone morphogenetic protein 2 (BMP-2) was applied 1 and 2 weeks after implantation. Weekly eddy current excitation measurements were performed. Additionally, invasive pH measurements were obtained from the scaffolds using fiber optic detection devices. Correlations between the eddy current measurements and the metabolic values were calculated. The eddy current measurements and pH values decreased significantly in the first 2 weeks of the study, followed by a steady increase and stabilization at higher levels towards the end of the study. The measurement curves and statistical evaluations indicated a significant correlation between the resonance frequency values of the eddy current excitation measurements and the observed pH levels (p = 0.0041). This innovative technique was capable of noninvasively monitoring metabolic processes in living tissues according to pH values, showing a direct correlation between eddy current excitation and pH in an in vivo tissue engineering model.
D.M. Olson; T.J. Griffis; A. Noormets; R. Kolka; J. Chen
2013-01-01
Three years (2009-2011) of near-continuous methane (CH4) and carbon dioxide (CO2) fluxes were measured with the eddy covariance (EC) technique at a temperate peatland located within the Marcell Experimental Forest, in northern Minnesota, USA. The peatland was a net source of CH4 and a net sink of CO...
G. Starr; C. L. Staudhammer; H. W. Loescher; R. Mitchell; A. Whelan; J. K. Hiers; J. J. O’Brien
2015-01-01
Frequency and intensity of fire determines the structure and regulates the function of savanna ecosystems worldwide, yet our understanding of prescribed fire impacts on carbon in these systems is rudimentary. We combined eddy covariance (EC) techniques and fuel consumption plots to examine the short-term response of longleaf pine forest carbon dynamics to one...
ChinaSpec: a network of SIF observations to bridge flux measurements and remote sensing data
NASA Astrophysics Data System (ADS)
Zhang, Y.; Wang, S.; Liu, L.; Ju, W.; Zhu, X.
2017-12-01
Accurately quantifying atmosphere-biosphere interactions across multiple scale still remains a challenge. Remote sensing, especially satellite data, has been widely used as a solution to resolve the broad scale estimation of carbon flux by upscaling the point measurements of eddy covariance (EC) technique. However, critical gaps remain between the EC observations and coarse satellite data due to the scale mismatch. In this regard, it is necessary to build a network of in situ optical observations to bridge the scale-mismatch between EC measurements and satellite remote sensing data. Internationally, a few networks have already been established (e.g., SpecNet and EuroSpec), but still at its early stage. ChinaSpec is a network of linking in situ spectral measurements, especially sun-induce chlorophyll fluorescence (SIF), with point EC observations for better understanding the interactions of atmosphere-biosphere. One main focus of ChinsSpec is to conduct continuous field SIF measurements at multiple EC sites across the mainland of China. This will help us better understand the mechanics of SIF and photosynthesis, and resolve the missing gaps between recent SIF retrievals from coarse satellite data and EC observations. In this presentation, we introduce the background, current stage, and the development of ChinaSpec network.
Small spatial variability in methane emission measured from a wet patterned boreal bog
NASA Astrophysics Data System (ADS)
Korrensalo, Aino; Männistö, Elisa; Alekseychik, Pavel; Mammarella, Ivan; Rinne, Janne; Vesala, Timo; Tuittila, Eeva-Stiina
2018-03-01
We measured methane fluxes of a patterned bog situated in Siikaneva in southern Finland from six different plant community types in three growing seasons (2012-2014) using the static chamber method with chamber exposure of 35 min. A mixed-effects model was applied to quantify the effect of the controlling factors on the methane flux. The plant community types differed from each other in their water level, species composition, total leaf area (LAITOT) and leaf area of aerenchymatous plant species (LAIAER). Methane emissions ranged from -309 to 1254 mg m-2 d-1. Although methane fluxes increased with increasing peat temperature, LAITOT and LAIAER, they had no correlation with water table or with plant community type. The only exception was higher fluxes from hummocks and high lawns than from high hummocks and bare peat surfaces in 2013 and from bare peat surfaces than from high hummocks in 2014. Chamber fluxes upscaled to ecosystem level for the peak season were of the same magnitude as the fluxes measured with the eddy covariance (EC) technique. In 2012 and in August 2014 there was a good agreement between the two methods; in 2013 and in July 2014, the chamber fluxes were higher than the EC fluxes. Net fluxes to soil, indicating higher methane oxidation than production, were detected every year and in all community types. Our results underline the importance of both LAIAER and LAITOT in controlling methane fluxes and indicate the need for automatized chambers to reliably capture localized events to support the more robust EC method.
NASA Astrophysics Data System (ADS)
Ma, M., II; Yuan, W.; Dong, J.; Zhang, F.; Cai, W.; Li, H.
2017-12-01
Vegetation gross primary production (GPP) is an important variable for the carbon cycle on the Qinghai-Tibetan Plateau (QTP). Based on the measurements from twelve eddy covariance (EC) sites, we validated a light use efficiency model (i.e. EC-LUE) to evaluate the spatial-temporal patterns of GPP and the effect of environmental variables on QTP. The EC-LUE model explained 85.4% of the daily observed GPP variations through all of the twelve EC sites, and characterized very well the seasonal changes of GPP. Annual GPP over the entire QTP ranged from 575 to 703 Tg C, and showed a significantly increasing trend from 1982 to 2013. However, there were large spatial heterogeneities in long-term trends of GPP. Throughout the entire QTP, air temperature TA increase had a greater influence than solar radiation and PREC changes on productivity. Moreover, our results highlight the large uncertainties of previous GPP estimates due to insufficient parameterization and validations. When compared with GPP estimates of the EC-LUE model, most Coupled Model Intercomparison Project (CMIP5) GPP products overestimate the magnitude and increasing trends of regional GPP, which potentially impact the feedback of ecosystems to regional climate changes.
A model relating Eulerian spatial and temporal velocity correlations
NASA Astrophysics Data System (ADS)
Cholemari, Murali R.; Arakeri, Jaywant H.
2006-03-01
In this paper we propose a model to relate Eulerian spatial and temporal velocity autocorrelations in homogeneous, isotropic and stationary turbulence. We model the decorrelation as the eddies of various scales becoming decorrelated. This enables us to connect the spatial and temporal separations required for a certain decorrelation through the ‘eddy scale’. Given either the spatial or the temporal velocity correlation, we obtain the ‘eddy scale’ and the rate at which the decorrelation proceeds. This leads to a spatial separation from the temporal correlation and a temporal separation from the spatial correlation, at any given value of the correlation relating the two correlations. We test the model using experimental data from a stationary axisymmetric turbulent flow with homogeneity along the axis.
The Safety Course Design and Operations of Composite Overwrapped Pressure Vessels (COPV)
NASA Technical Reports Server (NTRS)
Saulsberry, Regor; Prosser, William
2015-01-01
Following a Commercial Launch Vehicle On-Pad COPV (Composite Overwrapped Pressure Vessels) failure, a request was received by the NESC (NASA Engineering and Safety Center) June 14, 2014. An assessment was approved July 10, 2014, to develop and assess the capability of scanning eddy current (EC) nondestructive evaluation (NDE) methods for mapping thickness and inspection for flaws. Current methods could not identify thickness reduction from necking and critical flaw detection was not possible with conventional dye penetrant (PT) methods, so sensitive EC scanning techniques were needed. Developmental methods existed, but had not been fully developed, nor had the requisite capability assessment (i.e., a POD (Probability of Detection) study) been performed.
Combined investigation of Eddy current and ultrasonic techniques for composite materials NDE
NASA Technical Reports Server (NTRS)
Davis, C. W.; Nath, S.; Fulton, J. P.; Namkung, M.
1993-01-01
Advanced composites are not without trade-offs. Their increased designability brings an increase in the complexity of their internal geometry and, as a result, an increase in the number of failure modes associated with a defect. When two or more isotropic materials are combined in a composite, the isotropic material failure modes may also combine. In a laminate, matrix delamination, cracking and crazing, and voids and porosity, will often combine with fiber breakage, shattering, waviness, and separation to bring about ultimate structural failure. This combining of failure modes can result in defect boundaries of different sizes, corresponding to the failure of each structural component. This paper discusses a dual-technology NDE (Non Destructive Evaluation) (eddy current (EC) and ultrasonics (UT)) study of graphite/epoxy (gr/ep) laminate samples. Eddy current and ultrasonic raster (Cscan) imaging were used together to characterize the effects of mechanical impact damage, high temperature thermal damage and various types of inserts in gr/ep laminate samples of various stacking sequences.
The micrometeorological flux measurement technique known as relaxed eddy accumulation (REA) holds promise as a powerful new tool for ecologists. The more popular eddy covariance (eddy correlation) technique requires the use of sensors that can respond at fast rates (10 Hz), and t...
Wells, Michael L; Moynagh, Michael R; Carter, Rickey E; Childs, Robert A; Leitch, Cameron E; Fletcher, Joel G; Yeh, Benjamin M; Venkatesh, Sudhakar K
2017-01-01
To compare MR hepatic fractional extracellular space (fECS) to liver stiffness (LS) with magnetic resonance elastography (MRE) for evaluation of liver fibrosis. 71 consecutive patients with suspected chronic liver disease underwent standard liver MRI with MR elastography and additional delayed Gd-DTPA-enhanced sequences at 5 and 10 min in order to calculate hepatic fECS (%) and LS (kilopascals, kPa). Two radiologists blinded to clinical history examined MR images and calculated fECS and LS in identical locations for every patient. Interobserver agreement was calculated using the intraclass correlation coefficient. Pearson's correlation was calculated for LS and fECS measures, as was the area under the receiver operatic curve (AUROC), sensitivity and specificity of fECS to predict liver stiffness ≥2.93 and ≥5 kPa. The sensitivity of fECS for detecting fibrosis was separately analyzed in the subgroup of patients without anatomic findings of cirrhosis. Substantial to excellent interobserver agreement for both LS and fECS measurements was seen with intraclass correlation of 0.88 (95% CI 0.81-0.92) for LS, 0.77 (95% CI 0.66-0.85) for fECS 5 and 0.76 (95% CI 0.64-0.84) for fECS 10 . A significant correlation was found between MRE and fECS 5 (r = 0.47, p < 0.0001) and fECS 10 (r = 0.44, p < 0.0001). The performance of fECS improved for detection of advanced fibrosis (≥5 kPa) with AUROC, sensitivity and specificity of 0.72, 38%, and 94% for fECS 5 and 0.72, 67%, and 66% for fECS 10 . fECS correlates modestly with MRE-determined LS. fECS at MRI is a simple calculation to perform and may represent a practical way to suggest the presence of fibrosis during routine liver evaluation.
NASA Astrophysics Data System (ADS)
Tao, L.; Sun, K.; Pan, D.; Golston, L.; Stanton, L. G.; Ham, J. M.; Shonkwiler, K. B.; Nash, C.; Zondlo, M. A.
2014-12-01
Ammonia (NH3) is the dominant alkaline species in the atmosphere and an important compound in the global nitrogen cycle. There is a large uncertainty in NH3 emission inventory from agriculture, which is the largest source of NH3, including livestock farming and fertilizer applications. In recent years, a quantum cascade laser (QCL)-based open-path sensor has been developed to provide high-resolution, fast-response and high-sensitivity NH3 measurements. It has a detection limit of 150 pptv with a sample rate up to 20 Hz. This sensor has been integrated into a mobile platform mounted on the roof of a car to perform measurement of multiple trace gases. We have also used the sensor for eddy covariance (EC) flux measurements. The mobile sensing method provides high spatial resolution and fast mapping of measured gases. Meanwhile, the EC flux method offers accurate flux measurements and resolves the diurnal variability of NH3emissions. During the DISCOVER-AQ and FRAPPÉ field campaigns in 2014, this mobile platform was used to study NH3 emissions from cattle feedlot near Fort Morgan, Colorado. This specific feedlot was mapped multiple times in different days to study the variability of its plume characteristics. At the same time, we set up another open-path NH3 sensor with LICOR open-path sensors to perform EC flux measurements of NH3, CH4 and CO2 simultaneously in the same cattle feedlot as shown in Fig. 1. NH3/CH4 emission flux ratio show a strong temperature dependence from EC flux measurements. The median value of measured NH3 and CH4 emission flux ratio is 0.60 ppmv/ppmv. In contrast, the median value of ΔNH3/ΔCH4 ratios measured from mobile platform is 0.53 ppmv/ppmv for the same farm. The combination of mobile mapping and EC flux measurements with the same open-path sensors greatly improves understanding of NH3 emissions both spatially and temporally.
NASA Astrophysics Data System (ADS)
Savage, K. E.; Shoemaker, J.; Hollinger, D. Y.
2017-12-01
Boreal-transition forests contain a range of soil moisture conditions, from drier "uplands" to embedded wetlands, with transitional soils in between. This creates a complex topography of methane (CH4) producing and consuming patches. Seasonally, CH4 production in wet environments can be orders of magnitude greater than methane uptake rates in drier soils, as well as being much more episodic. The spatial and temporal variability in flux magnitudes from these drainage conditions creates a challenge for constraining the contribution of these forests to the global CH4 cycle. Ground based chambers capture small-scale fluxes, and are often distributed to capture specific soil conditions. Soil chambers have been the primary tool for assessing CH4 fluxes from natural soils, with observations being scaled up to represent broader regions. The study of CH4 biogeochemistry lacked meso-scale measurements to provide checks between the global atmospheric data and the soil chambers. Recent advances in the technology of fast response CH4 analyzers have led to increased use of the eddy-flux covariance (EC) method to capture CH4 fluxes over a larger landscape-scale. The EC method captures net exchange at the top of the vegetation canopy, across a footprint of varying size, dependent on wind-speed, direction, surface roughness, turbulence, sensor height and atmospheric stability. Simultaneous deployment of EC and soil chambers provide a critical means to reconcile bottom up with top down approaches to quantify CH4 fluxes. Two years of CH4 flux data from an EC tower in Howland forest, a boreal-transition forest in north-central Maine, USA, are compared with concurrent automated soil chamber data collected within the tower footprint and distributed among soil drainage classes. An EC footprint model was used to determine a daily and sub-daily tower footprint. Using a published soil analysis of the Howland tower area, and Lidar imagery of tree canopy, we explore various strategies for upscaling chamber fluxes: footprint estimates, aerial weighting by drainage class, and canopy density; and compare to measurements from the EC tower. Analyzing simultaneous flux data from both scales over multiple years, will enable us to evaluate these methodologies and enhance our understanding of CH4 biogeochemistry at all scales.
Eddy Covariance measurements of stable isotopes (δD and δ18O) in water vapor
NASA Astrophysics Data System (ADS)
Braden-Behrens, J.; Knohl, A.
2016-12-01
Stable isotopes are a promising tool to enhance our understanding of ecosystem gas exchanges. Studying 18O and 2H (D) in water vapour (H2Ov) can e.g. help partitioning evapotranspiration into its components. With recent developments in laser spectroscopy direct Eddy Covariance (EC) measurements to investigate fluxes of stable isotopologues became feasible. But so far only very few case studies applying the EC method to stable isotopes in water vapor have been carried out worldwide At our micrometeorological EC tower in a managed beech forest in Thuringia, Germany, we continuously measure fluxes of water vapor isotopologues using EC since autumn 2015. The set-up is based on an off-axis cavity output water vapor isotope analyzer (WVIA, Los Gatos Research. Inc, USA) that measures the water vapour concentration and its isotopic composition (δD and δ18O). The instrument is optimized for high flow rates (app. 4slpm) to generate high frequent (2Hz) measurements. The HF-optimized WVIA showed sufficient precision with a minimal Allan Deviation of 0.023 ‰ for δD and 0.02 ‰ for δ18O for averaging periods of app. 700 s and 400 s resp. The instrument is calibrated hourly using a high-flow optimized version of the water vapor isotope standard source (WVISS, Los Gatos Research. Inc, USA) that provides water vapor with known isotopic composition for a large range of different concentrations. Our calibration scheme includes a near continuous concentration range calibration instead of a simple 2 or 3-point calibration to face the analyzers large concentration dependency within a range of app. 6 000 to 16 000 ppm in winter and app. 8 000 to 23 000 ppm in summer. We evaluate the calibration approach, present specific aspects of the set-up such as the HF optimization and compare the measured and averaged spectra and cospectra of the isotopologue analyzer with those of the longterm EC installation (using a LI-6262 as well as a LI-7200 infrared gas analyzer at 10 Hz). Furthermore, we show results for the isotopologue fluxes before and after leaf unfolding in spring/summer 2016. This novel instrument for EC measurements of water vapor isotopologues provides a new exciting opportunity for studying the hydrological cycle in long-term observation networks like Ameriflux and ICOS.
Sonia Wharton; Matt Schroeder; Kyaw Tha Paw U; Matthias Falk; Ken Bible
2009-01-01
Carbon dioxide (CO2), water vapor, and energy fluxes were measured using eddy covariance (EC) methodology over three adjacent evergreen forests in southern Washington State to identify stand-level age-effects on ecosystem exchange. The sites represent Douglas-fir forest ecosystems at two contrasting successional stages: old-growth (OG) and early...
USDA-ARS?s Scientific Manuscript database
Net ecosystem exchange (NEE) of carbon dioxide (CO2) and water vapor (H2O) fluxes from irrigated grain sorghum (Sorghum bicolor L. Moench) and maize (Zea mays L.) fields in the Texas High Plains were quantified using the eddy covariance (EC) technique during 2014-2016 growing seasons and examined in...
NASA Astrophysics Data System (ADS)
Li, X.; Xiao, J.; He, B.
2017-12-01
Solar-induced chlorophyll fluorescence (SIF) opens a new perspective on the monitoring of vegetation photosynthesis from space, and has been recently used to estimate gross primary productivity (GPP). However, previous studies on SIF were mainly based on satellite observations from the Greenhouse Gases Observing Satellite (GOSAT) and Global Ozone Monitoring Experiment-2 (GOME-2), and the evaluation of these coarse-resolution SIF measurements using GPP derived from eddy covariance (EC) flux towers has been hindered by the scale mismatch between satellite and tower footprints. We use new far-red SIF observations from the Orbiting Carbon Observatory-2 (OCO-2) satellite with much finer spatial resolution and GPP data from EC flux towers from 2014 to 2016 to examine the relationship between GPP and SIF for temperate forests. The OCO-2 SIF tracked tower GPP fairly well, and had strong correlation with tower GPP at both retrieval bands (757nm and 771nm) and both instantaneous (mid-day) and daily timescales. Daily SIF at 757nm (SIF757) exhibited much stronger correlation with tower GPP compared to MODIS enhanced vegetation index (EVI) and normalized difference vegetation index (NDVI) derived from either Terra or Aqua and had a similarly strong relationship as EVI based on the bidirectional reflectance distribution function (BRDF) corrected reflectance product (Terra+Aqua). Absorbed photosynthetically active radiation (APAR) explained 85% of the variance in SIF757, while the product of APAR and two environmental scalars - fTmin and fVPD (representing minimum temperature stress and water stress) explained slightly higher variance (92%) in SIF757. This suggests that SIF mainly depends on APAR and also contains information on light use efficiency (LUE) reflecting environmental stresses and physiological or biochemical variations of vegetation. The hyperbolic model based on SIF757 estimated GPP well (R2=0.81, p<0.0001; RMSE=1.11 gC m-2 d-1), and its performance was comparable to or slightly better than that of a LUE-based GPP model - the MODSI GPP algorithm. Our findings demonstrate the strong predictive ability of OCO-2 SIF in estimating GPP for temperate forests and its potential in future ecosystem functioning and carbon cycling studies.
NASA Astrophysics Data System (ADS)
Shao, Yaping; Liu, Shaofeng; Schween, Jan H.; Crewell, Susanne
2013-08-01
A model is developed for the large-eddy simulation (LES) of heterogeneous atmosphere and land-surface processes. This couples a LES model with a land-surface scheme. New developments are made to the land-surface scheme to ensure the adequate representation of atmosphere-land-surface transfers on the large-eddy scale. These include, (1) a multi-layer canopy scheme; (2) a method for flux estimates consistent with the large-eddy subgrid closure; and (3) an appropriate soil-layer configuration. The model is then applied to a heterogeneous region with 60-m horizontal resolution and the results are compared with ground-based and airborne measurements. The simulated sensible and latent heat fluxes are found to agree well with the eddy-correlation measurements. Good agreement is also found in the modelled and observed net radiation, ground heat flux, soil temperature and moisture. Based on the model results, we study the patterns of the sensible and latent heat fluxes, how such patterns come into existence, and how large eddies propagate and destroy land-surface signals in the atmosphere. Near the surface, the flux and land-use patterns are found to be closely correlated. In the lower boundary layer, small eddies bearing land-surface signals organize and develop into larger eddies, which carry the signals to considerably higher levels. As a result, the instantaneous flux patterns appear to be unrelated to the land-use patterns, but on average, the correlation between them is significant and persistent up to about 650 m. For a given land-surface type, the scatter of the fluxes amounts to several hundred W { m }^{-2}, due to (1) large-eddy randomness; (2) rapid large-eddy and surface feedback; and (3) local advection related to surface heterogeneity.
Long term measurement of lake evaporation using a pontoon mounted Eddy Covariance system
NASA Astrophysics Data System (ADS)
McGowan, H. A.; McGloin, R.; McJannet, D.; Burn, S.
2011-12-01
Accurate quantification of evaporation from water storages is essential for design of water management and allocation policy that aims to balance demands for water without compromising the sustainability of future water resources, particularly during periods of prolonged and severe drought. Precise measurement of evaporation from lakes and dams however, presents significant research challenges. These include design and installation of measurement platforms that can withstand a range of wind and wave conditions; accurate determination of the evaporation measurement footprint and the influence of changing water levels. In this paper we present results from a two year long deployment of a pontoon mounted Eddy Covariance (EC) system on a 17.2ha irrigation reservoir in southeast Queensland, Australia. The EC unit included a CSAT-3 sonic anemometer (Campbell Scientific, Utah, United States) and a Li-Cor CS7500 open-path H2O/CO2 infrared gas analyzer (LiCor, Nebraska, United States) at a height of 2.2m, a net radiometer (CNR1, Kipp & Zonen, Netherlands) at a height of 1.2m and a humidity and temperature probe (HMP45C,Vaisala, Finland) at 2.3m. The EC unit was controlled by a Campbell Scientific CR3000 data logger with flux measurements made at 10 Hz and block averaged values logged every 15 minutes. Power to the EC system was from mounted solar panels that charged deep cycle lead-acid batteries while communication was via a cellphone data link. The pontoon was fitted with a weighted central beam and gimbal ring system that allowed self-levelling of the instrumentation and minimized dynamic influences on measurements (McGowan et al 2010; Wiebe et al 2011). EC measurements were corrected for tilt errors using the double rotation method for coordinate rotation described by Wilczak et al. (2001). High and low frequency attenuation of the measured co-spectrum was corrected using Massman's (2000) method for estimating frequency response corrections, while measurements were corrected for density fluctuations using the method of Webb-Pearman-Leuning (Webb et al. 1980). The evaporation measurement footprint over the reservoir was determined using the SCADIS one and a half order turbulence closure footprint model (Sogachev and Lloyd, 2004). Comparison of EC measured evaporation rates show excellent agreement with independent measurement of evaporation by scintillometer under a wide range of conditions (McJannet et al 2011). They confirm that pontoon mounted EC systems offer a robust, highly portable and reliable cost effective approach for accurate quantification of evaporation from reservoirs.
Towards physiologically meaningful water-use efficiency estimates from eddy covariance data.
Knauer, Jürgen; Zaehle, Sönke; Medlyn, Belinda E; Reichstein, Markus; Williams, Christopher A; Migliavacca, Mirco; De Kauwe, Martin G; Werner, Christiane; Keitel, Claudia; Kolari, Pasi; Limousin, Jean-Marc; Linderson, Maj-Lena
2018-02-01
Intrinsic water-use efficiency (iWUE) characterizes the physiological control on the simultaneous exchange of water and carbon dioxide in terrestrial ecosystems. Knowledge of iWUE is commonly gained from leaf-level gas exchange measurements, which are inevitably restricted in their spatial and temporal coverage. Flux measurements based on the eddy covariance (EC) technique can overcome these limitations, as they provide continuous and long-term records of carbon and water fluxes at the ecosystem scale. However, vegetation gas exchange parameters derived from EC data are subject to scale-dependent and method-specific uncertainties that compromise their ecophysiological interpretation as well as their comparability among ecosystems and across spatial scales. Here, we use estimates of canopy conductance and gross primary productivity (GPP) derived from EC data to calculate a measure of iWUE (G 1 , "stomatal slope") at the ecosystem level at six sites comprising tropical, Mediterranean, temperate, and boreal forests. We assess the following six mechanisms potentially causing discrepancies between leaf and ecosystem-level estimates of G 1 : (i) non-transpirational water fluxes; (ii) aerodynamic conductance; (iii) meteorological deviations between measurement height and canopy surface; (iv) energy balance non-closure; (v) uncertainties in net ecosystem exchange partitioning; and (vi) physiological within-canopy gradients. Our results demonstrate that an unclosed energy balance caused the largest uncertainties, in particular if it was associated with erroneous latent heat flux estimates. The effect of aerodynamic conductance on G 1 was sufficiently captured with a simple representation. G 1 was found to be less sensitive to meteorological deviations between canopy surface and measurement height and, given that data are appropriately filtered, to non-transpirational water fluxes. Uncertainties in the derived GPP and physiological within-canopy gradients and their implications for parameter estimates at leaf and ecosystem level are discussed. Our results highlight the importance of adequately considering the sources of uncertainty outlined here when EC-derived water-use efficiency is interpreted in an ecophysiological context. © 2017 John Wiley & Sons Ltd.
Eddy current technique for predicting burst pressure
Petri, Mark C.; Kupperman, David S.; Morman, James A.; Reifman, Jaques; Wei, Thomas Y. C.
2003-01-01
A signal processing technique which correlates eddy current inspection data from a tube having a critical tubing defect with a range of predicted burst pressures for the tube is provided. The method can directly correlate the raw eddy current inspection data representing the critical tubing defect with the range of burst pressures using a regression technique, preferably an artificial neural network. Alternatively, the technique deconvolves the raw eddy current inspection data into a set of undistorted signals, each of which represents a separate defect of the tube. The undistorted defect signal which represents the critical tubing defect is related to a range of burst pressures utilizing a regression technique.
NASA Astrophysics Data System (ADS)
Griessbaum, F.; Narita, Y.; Held, A.; Klemm, O.; Uematsu, M.
2006-12-01
Recent studies of emission and deposition of atmospheric aerosols employing the eddy covariance technique (EC) have been conducted in the terrestrial and marine boundary layer, the latter mainly limited to fixed platforms in the coastal domain. The captioned approach enables us to study the sinks and sources of atmospheric aerosols and their impact on the sea/air exchange of materials and on the direct and indirect radiation effect in the marine boundary layer from moving platforms, such as vessels. Measurements of atmospheric parameters from a ship are challenging especially due to the flow distortion caused by the ship's superstructure and the vessel's motions. It is known from recent work employing computational fluid dynamics (CFD) on the geometry of vessels, that the most suitable place for undistorted measurements is at the very bow and the most elevated location, commonly the foremast. For this reason, the entire eddy covariance instrumentation was fixed at the very top of the foremast, consisting of: sonic anemometer, condensation particle counter (CPC, from 5 nm particle diameter), fog droplet spectrometer (2 to 50 μm droplet diameter), CO{_2}/H{_2}O Analyser and an inertial sensing system. In order to operate the CPC also while the vessel is underway or in rough sea conditions, the max tilt angle (rolling and pitching) of the CPC was technically improved from 10° up to over 30°. This EC-measurement was conducted over the high primary productive region with high frequency of sea fog appearance during the cruise MR06-4 on R/V Mirai from Hokkaido, Japan, to the Chukchi Sea in Arctic Ocean, lasting from August 2 through September 29, 2006. Initial results will be presented and discussed.
Modelling carbon and water fluxes at global scale
NASA Astrophysics Data System (ADS)
Balzarolo, M.; Balsamo, G.; Barbu, A.; Boussetta, S.; Calvet, J.-C.; Chevallier, F.; de Vries, J.; Kullmann, L.; Lafont, S.; Maignan, F.; Papale, D.; Poulter, B.
2012-04-01
Modelling and predicting seasonal and inter-annual variability of terrestrial carbon and water fluxes play an important role in understanding processes and interactions between plant-atmosphere and climate. Testing the model's capability to simulate fluxes across and within the ecosystems against eddy covariance data is essential. Thanks to the existing eddy covariance (EC) networks (e.g FLUXNET), where CO2 and water exchanges are continuously measured, it is now possible to verify the model's goodness at global scale. This paper reports the outcomes of the verification activities of the Land Carbon Core Information Service (LC-CIS) of the Geoland2 European project. The three used land surface models are C-TESSEL from ECMWF, SURFEX from CNRM and ORCHIDEE from IPSL. These models differ in their hypotheses used to describe processes and the interactions between ecological compartments (plant, soil and atmosphere) and climate and environmental conditions. Results of the verification and model benchmarking are here presented. Surface fluxes of the models are verified against FLUXNET sites representing main worldwide Plant Functional Types (PFTs: forest, grassland and cropland). The quality and accuracy of the EC data is verified using the CarboEurope database methodology. Modelled carbon and water fluxes magnitude, daily and annual cycles, inter-annual anomalies are verified against eddy covariance data using robust statistical analysis (r, RMSE, E, BE). We also verify the performance of the models in predicting the functional responses of Gross Primary Production (GPP) and RE (Ecosystem Respiration) to the environmental driving variables (i.e. temperature, soil water content and radiation) by comparing the functional relationships obtained from the outputs and observed data. Obtained results suggest some ways of improving such models for global carbon modelling.
NASA Astrophysics Data System (ADS)
Seo, Sukho; Choi, Gyudong; Eom, Tae Jhoun; Lee, Bokwon; Lee, Soo Yeol
2017-07-01
The eddy current responses of Electrical Discharge Machining (EDM) notches and fatigue cracks are directly compared to verify the reliability of eddy current inspection. The fatigue crack growth tests using a constant load range control mode were conducted to obtain a variety of edge crack sizes, ranging from 0.9 to 6.6 mm for Al alloy and from 0.1 to 3 mm for Ti alloy. EDM notch specimens of Al and Ti alloys were accordingly prepared in lengths similar to that of the fatigued specimen. The crack length was determined by optical microscope and scanning electron microscope. The eddy current responses between the EDM and fatigued specimens with varying notch/crack length were examined using probe sensors at (100-500) kHz and (1-2) MHz for Al and Ti alloys, respectively. The results show a significant difference in the eddy current signal between the two specimens, based on the correlation between the eddy current response and notch/crack length. This suggests that eddy current inspection using the EDM reference specimen is inaccurate in determining the precise crack size, unless the eddy current response data base is obtained from a fatigue-cracked specimen.
Response of ecosystem carbon fluxes to drought events in a poplar plantation in Northern China
Jie Zhou; Zhiqiang Zhang; Ge Sun; Xianrui Fang; Tonggang Zha; Steve McNulty; Jiquan Chen; Ying Jin; Asko Noormets
2013-01-01
Poplar plantations are widely used for timber production and ecological restoration in northern China,a region that experiences frequent droughts and water scarcity. An open-path eddy-covariance (EC)system was used to continuously measure the carbon,water,and energy fluxes in a poplar plantation during the growing season (i.e., AprilâOctober)over the period 2006â2008...
An improved PSO-SVM model for online recognition defects in eddy current testing
NASA Astrophysics Data System (ADS)
Liu, Baoling; Hou, Dibo; Huang, Pingjie; Liu, Banteng; Tang, Huayi; Zhang, Wubo; Chen, Peihua; Zhang, Guangxin
2013-12-01
Accurate and rapid recognition of defects is essential for structural integrity and health monitoring of in-service device using eddy current (EC) non-destructive testing. This paper introduces a novel model-free method that includes three main modules: a signal pre-processing module, a classifier module and an optimisation module. In the signal pre-processing module, a kind of two-stage differential structure is proposed to suppress the lift-off fluctuation that could contaminate the EC signal. In the classifier module, multi-class support vector machine (SVM) based on one-against-one strategy is utilised for its good accuracy. In the optimisation module, the optimal parameters of classifier are obtained by an improved particle swarm optimisation (IPSO) algorithm. The proposed IPSO technique can improve convergence performance of the primary PSO through the following strategies: nonlinear processing of inertia weight, introductions of the black hole and simulated annealing model with extremum disturbance. The good generalisation ability of the IPSO-SVM model has been validated through adding additional specimen into the testing set. Experiments show that the proposed algorithm can achieve higher recognition accuracy and efficiency than other well-known classifiers and the superiorities are more obvious with less training set, which contributes to online application.
Conditional CO2 flux analysis of a managed grassland with the aid of stable isotopes
NASA Astrophysics Data System (ADS)
Zeeman, M. J.; Tuzson, B.; Emmenegger, L.; Knohl, A.; Buchmann, N.; Eugster, W.
2009-04-01
Short statured managed ecosystems, such as agricultural grasslands, exhibit high temporal changes in carbon dioxide assimilation and respiration fluxes for which measurements of the net CO2 flux, e.g. by using the eddy covariance (EC) method, give only limited insight. We have therefore adopted a recently proposed concept for conditional EC flux analysis of forest to grasslands, in order to identify and quantify daytime sub-canopy respiration fluxes. To validate the concept, high frequency (≈5 Hz) stable carbon isotope analyis of CO2 was used. We made eddy covariance measurements of CO2 and its isotopologues during four days in August 2007, using a novel quantum cascade laser absorption spectrometer, capable of high time resolution stable isotope analysis. The effects of a grass cut during the measurement period could be detected and resulted in a sub-canopy source conditional flux classification, for which the isotope composition of the CO2 could be confirmed to be of a respiration source. However, the conditional flux method did not work for an undisturbed grassland canopy. We attribute this to the flux measurement height that was chosen well above the roughness sublayer, where the natural isotopic tracer (δ13C) of respiration was too well mixed with background air.
NASA Astrophysics Data System (ADS)
Song, Yi; Ma, Mingguo; Li, Xin; Wang, Xufeng
2011-11-01
This research dealt with a daytime integration method with the help of Simple Biosphere Model, Version 2 (SiB2). The field observations employed in this study were obtained at the Yingke (YK) oasis super-station, which includes an Automatic Meteorological Station (AMS), an eddy covariance (EC) system and a Soil Moisture and Temperature Measuring System (SMTMS). This station is located in the Heihe River Basin, the second largest inland river basin in China. The remotely sensed data and field observations employed in this study were derived from Watershed Allied Telemetry Experimental Research (WATER). Daily variations of EF in temporal and spatial scale would be detected by using SiB2. An instantaneous midday EF was calculated based on a remote-sensing-based estimation of surface energy budget. The invariance of daytime EF was examined using the instantaneous midday EF calculated from a remote-sensing-based estimation. The integration was carried out using the constant EF method in the intervals with a steady EF. Intervals with an inconsistent EF were picked up and ET in these intervals was integrated separately. The truth validation of land Surface ET at satellite pixel scale was carried out using the measurement of eddy covariance (EC) system.
NASA Astrophysics Data System (ADS)
Fei, Xuehai; Jin, Yanqiang; Zhang, Yiping; Sha, Liqing; Liu, Yuntong; Song, Qinghai; Zhou, Wenjun; Liang, Naishen; Yu, Guirui; Zhang, Leiming; Zhou, Ruiwu; Li, Jing; Zhang, Shubin; Li, Peiguang
2017-02-01
Savanna ecosystems play a crucial role in the global carbon cycle. However, there is a gap in our understanding of carbon fluxes in the savanna ecosystems of Southeast Asia. In this study, the eddy covariance technique (EC) and the biometric-based method (BM) were used to determine carbon exchange in a savanna ecosystem in Southwest China. The BM-based net ecosystem production (NEP) was 0.96 tC ha-1 yr-1. The EC-based estimates of the average annual gross primary productivity (GPP), ecosystem respiration (Reco), and net ecosystem carbon exchange (NEE) were 6.84, 5.54, and -1.30 tC ha-1 yr-1, respectively, from May 2013 to December 2015, indicating that this savanna ecosystem acted as an appreciable carbon sink. The ecosystem was more efficient during the wet season than the dry season, so that it represented a small carbon sink of 0.16 tC ha-1 yr-1 in the dry season and a considerable carbon sink of 1.14 tC ha-1 yr-1 in the wet season. However, it is noteworthy that the carbon sink capacity may decline in the future under rising temperatures and decreasing rainfall. Consequently, further studies should assess how environmental factors and climate change will influence carbon-water fluxes.
NASA Astrophysics Data System (ADS)
Klosterhalfen, Anne; Moene, Arnold; Schmidt, Marius; Ney, Patrizia; Graf, Alexander
2017-04-01
Source partitioning of eddy covariance (EC) measurements of CO2 into respiration and photosynthesis is routinely used for a better understanding of the exchange of greenhouse gases, especially between terrestrial ecosystems and the atmosphere. The most frequently used methods are usually based either on relations of fluxes to environmental drivers or on chamber measurements. However, they often depend strongly on assumptions or invasive measurements and do usually not offer partitioning estimates for latent heat fluxes into evaporation and transpiration. SCANLON and SAHU (2008) and SCANLON and KUSTAS (2010) proposed an promising method to estimate the contributions of transpiration and evaporation using measured high frequency time series of CO2 and H2O fluxes - no extra instrumentation necessary. This method (SK10 in the following) is based on the spatial separation and relative strength of sources and sinks of CO2 and water vapor among the sub-canopy and canopy. Assuming that air from those sources and sinks is not yet perfectly mixed before reaching EC sensors, partitioning is estimated based on the separate application of the flux-variance similarity theory to the stomatal and non-stomatal components of the regarded fluxes, as well as on additional assumptions on stomatal water use efficiency (WUE). The CO2 partitioning method after THOMAS et al. (2008) (TH08 in the following) also follows the argument that the dissimilarities of sources and sinks in and below a canopy affect the relation between H2O and CO2 fluctuations. Instead of involving assumptions on WUE, TH08 directly screens their scattergram for signals of joint respiration and evaporation events and applies a conditional sampling methodology. In spite of their different main targets (H2O vs. CO2), both methods can yield partitioning estimates on both fluxes. We therefore compare various sub-methods of SK10 and TH08 including own modifications (e.g., cluster analysis) to each other, to established source partitioning methods, and to chamber measurements at various agroecosystems. Further, profile measurements and a canopy-resolving Large Eddy Simulation model are used to test the assumptions involved in SK10. Scanlon, T.M., Kustas, W.P., 2010. Partitioning carbon dioxide and water vapor fluxes using correlation analysis. Agricultural and Forest Meteorology 150 (1), 89-99. Scanlon, T.M., Sahu, P., 2008. On the correlation structure of water vapor and carbon dioxide in the atmospheric surface layer: A basis for flux partitioning. Water Resources Research 44 (10), W10418, 15 pp. Thomas, C., Martin, J.G., Goeckede, M., Siqueira, M.B., Foken, T., Law, B.E., Loescher H.W., Katul, G., 2008. Estimating daytime subcanopy respiration from conditional sampling methods applied to multi-scalar high frequency turbulence time series. Agricultural and Forest Meteorology 148 (8-9), 1210-1229.
Wall-based identification of coherent structures in wall-bounded turbulence
NASA Astrophysics Data System (ADS)
Sanmiguel Vila, C.; Flores, O.
2018-04-01
During the last decades, a number of reduced order models based on coherent structures have been proposed to describe wall-bounded turbulence. Many of these models emphasize the importance of coherent wall-normal velocity eddies (ν-eddies), which drive the generation of the very long streamwise velocity structures observed in the logarithmic and outer region. In order to use these models to improve our ability to control wall-bounded turbulence in realistic applications, these ν-eddies need to be identified from the wall in a non-intrusive way. In this paper, the possibility of using the pressure signal at the wall to identify these ν-eddies is explored, analyzing the cross-correlation between the wall-normal velocity component and the pressure fluctuations at the wall in a DNS of a turbulent channel flow at Reτ = 939. The results show that the cross-correlation has a region of negative correlation upstream, and a region of positive correlation backwards. In the spanwise direction the correlation decays monotonously, except very close to the wall where a change of sign of the correlation coefficient is observed. Moreover, filtering the pressure fluctuations at the wall in space results in an increase of the region where the cross-correlation is strong, both for the positively and the negatively correlated regions. The use of a time filter for the pressure fluctuations at the wall yields different results, displacing the regions of strong correlation without changing much their sizes. The results suggest that space-filtering the pressure at the wall is a feasible way to identify ν-eddies of different sizes, which could be used to trigger turbulent control strategies.
Tests of a robust eddy correlation system for sensible heat flux
NASA Astrophysics Data System (ADS)
Blanford, J. H.; Gay, L. W.
1992-03-01
Sensible heat flux estimates from a simple, one-propeller eddy correlation system (OPEC) were compared with those from a sonic anemometer eddy correlation system (SEC). In accordance with similarity theory, the performance of the OPEC system improved with increasing height of the sensor above the surface. Flux totals from the two systems at sites with adequate fetch were in excellent agreement after frequency response corrections were applied. The propeller system appears suitable for long periods of unattended measurement. The sensible heat flux measurements can be combined with net radiation and soil heat flux measurements to estimate latent heat as a residual in the surface energy balance.
DOE Office of Scientific and Technical Information (OSTI.GOV)
Morin, T. H.; Bohrer, G.; Stefanik, K. C.
Methane (CH 4) emissions and carbon uptake in temperate freshwater wetlands act in opposing directions in the context of global radiative forcing. Large uncertainties exist for the rates of CH 4 emissions making it difficult to determine the extent that CH 4 emissions counteract the carbon sequestration of wetlands. Urban temperate wetlands are typically small and feature highly heterogeneous land cover, posing an additional challenge to determining their CH 4 budget. The data analysis approach we introduce here combines two different CH 4 flux measurement techniques to overcome scale and heterogeneity problems and determine the overall CH 4 budget ofmore » a small, heterogeneous, urban wetland landscape. Temporally intermittent point measurements from non-steady-state chambers provided information about patch-level heterogeneity of fluxes, while continuous, high temporal resolution flux measurements using the eddy-covariance (EC) technique provided information about the temporal dynamics of the fluxes. Patch-level scaling parameterization was developed from the chamber data to scale eddy covariance data to a ‘fixed-frame’, which corrects for variability in the spatial coverage of the eddy covariance observation footprint at any single point in time. Finally, by combining two measurement techniques at different scales, we addressed shortcomings of both techniques with respect to heterogeneous wetland sites.« less
Morin, T. H.; Bohrer, G.; Stefanik, K. C.; ...
2017-02-17
Methane (CH 4) emissions and carbon uptake in temperate freshwater wetlands act in opposing directions in the context of global radiative forcing. Large uncertainties exist for the rates of CH 4 emissions making it difficult to determine the extent that CH 4 emissions counteract the carbon sequestration of wetlands. Urban temperate wetlands are typically small and feature highly heterogeneous land cover, posing an additional challenge to determining their CH 4 budget. The data analysis approach we introduce here combines two different CH 4 flux measurement techniques to overcome scale and heterogeneity problems and determine the overall CH 4 budget ofmore » a small, heterogeneous, urban wetland landscape. Temporally intermittent point measurements from non-steady-state chambers provided information about patch-level heterogeneity of fluxes, while continuous, high temporal resolution flux measurements using the eddy-covariance (EC) technique provided information about the temporal dynamics of the fluxes. Patch-level scaling parameterization was developed from the chamber data to scale eddy covariance data to a ‘fixed-frame’, which corrects for variability in the spatial coverage of the eddy covariance observation footprint at any single point in time. Finally, by combining two measurement techniques at different scales, we addressed shortcomings of both techniques with respect to heterogeneous wetland sites.« less
NASA Astrophysics Data System (ADS)
Steiner, J. F.; Stigter, E.; Litt, M.; Shea, J.; Bierkens, M. F.; Immerzeel, W. W.
2017-12-01
Debris-covered glaciers play an important role in the water cycle in high altitude catchments in the Himalaya. The melt dynamics of these glaciers are complex as a result of the debris. A thin debris layer (up to a few cm) may act as a facilitator of melt, whereas a thick layer serves primarily as an insulator. The debris cover itself shows a strong diurnal variation in temperature and humidity resulting in a complex interaction with the atmospheric boundary layer (ABL). Energy balance models are a common way to quantify sub-debris melt, but the importance of turbulent fluxes in this energy balance have so far been poorly investigated. We hypothesize that they may play a substantial role during phases of wetting and drying. In this study, ABL characteristics and surface turbulent fluxes are measured using an automatic weather station including an eddy-correlation (EC) system on the debris-covered Lirung glacier in Nepal over a 10 day period in late 2016, during the transition period from monsoon to the drier post-monsoon. The measurements are combined with surface temperature measurements and thermal UAV flights covering the footprint area of the EC tower to quantify the surface fluxes over a larger area. Our results show that turbulent fluxes do play a substantial role in the energy balance of debris-covered glaciers, and need to be accounted for to accurately simulate glacier melt. The EC tower results are subsequently evaluated against a number of different bulk approaches to quantify sensible and latent heat fluxes and are evaluated against turbulence characteristics. If found accurate enough, these approaches require less advanced measurement set-ups and can be applied on a wider scale.
NASA Astrophysics Data System (ADS)
Wang, Binbin; Ma, Yaoming; Ma, Weiqiang; Su, Zhongbo
2017-02-01
Precise measurements of evaporation and understanding of the physical controls on turbulent heat flux over lakes have fundamental significance for catchment-scale water balance analysis and local-scale climate modeling. The observation and simulation of lake-air turbulent flux processes have been widely carried out, but studies that examine high-altitude lakes on the Tibetan Plateau are still rare, especially for small lakes. An eddy covariance (EC) system, together with a four-component radiation sensor and instruments for measuring water temperature profiles, was set up in a small lake within the Nam Co basin in April 2012 for long-term evaporation and energy budget observations. With the valuable measurements collected during the ice-free periods in 2012 and 2013, the main conclusions are summarized as follows: First, a bulk aerodynamic transfer model (B model), with parameters optimized for the specific wave pattern in the small lake, could provide reliable and consistent results with EC measurements, and B model simulations are suitable for data interpolation due to inadequate footprint or malfunction of the EC instrument. Second, the total evaporation in this small lake (812 mm) is approximately 200 mm larger than that from adjacent Nam Co (approximately 627 mm) during their ice-free seasons. Third, wind speed shows significance at temporal scales of half hourly, whereas water vapor and temperature gradients have higher correlations over temporal scales of daily and monthly in lake-air turbulent heat exchange. Finally, energy stored during April to June is mainly released during September to November, suggesting an energy balance closure value of 0.97.
NASA Astrophysics Data System (ADS)
Smith, W. K.; Biederman, J. A.; Scott, R. L.; Moore, D. J. P.; He, M.; Kimball, J. S.; Yan, D.; Hudson, A.; Barnes, M. L.; MacBean, N.; Fox, A. M.; Litvak, M. E.
2018-01-01
Satellite remote sensing provides unmatched spatiotemporal information on vegetation gross primary productivity (GPP). Yet understanding of the relationship between GPP and remote sensing observations and how it changes with factors such as scale, biophysical constraint, and vegetation type remains limited. This knowledge gap is especially apparent for dryland ecosystems, which have characteristic high spatiotemporal variability and are under-represented by long-term field measurements. Here we utilize an eddy covariance (EC) data synthesis for southwestern North America in an assessment of how accurately satellite-derived vegetation proxies capture seasonal to interannual GPP dynamics across dryland gradients. We evaluate the enhanced vegetation index, solar-induced fluorescence (SIF), and the photochemical reflectivity index. We find evidence that SIF is more accurately capturing seasonal GPP dynamics particularly for evergreen-dominated EC sites and more accurately estimating the full magnitude of interannual GPP dynamics for all dryland EC sites. These results suggest that incorporation of SIF could significantly improve satellite-based GPP estimates.
An analytical technique for the measurement of the exchange (flux) of trace gases between the earth's surface and the atmosphere will be developed. Measurements will rely on the eddy correlation method (ECM). Target compounds are biogenically and anthropogenically emitted v...
Local atmospheric response to warm mesoscale ocean eddies in the Kuroshio-Oyashio Confluence region.
Sugimoto, Shusaku; Aono, Kenji; Fukui, Shin
2017-09-19
In the extratropical regions, surface winds enhance upward heat release from the ocean to atmosphere, resulting in cold surface ocean: surface ocean temperature is negatively correlated with upward heat flux. However, in the western boundary currents and eddy-rich regions, the warmer surface waters compared to surrounding waters enhance upward heat release-a positive correlation between upward heat release and surface ocean temperature, implying that the ocean drives the atmosphere. The atmospheric response to warm mesoscale ocean eddies with a horizontal extent of a few hundred kilometers remains unclear because of a lack of observations. By conducting regional atmospheric model experiments, we show that, in the Kuroshio-Oyashio Confluence region, wintertime warm eddies heat the marine atmospheric boundary layer (MABL), and accelerate westerly winds in the near-surface atmosphere via the vertical mixing effect, leading to wind convergence around the eastern edge of eddies. The warm-eddy-induced convergence forms local ascending motion where convective precipitation is enhanced, providing diabatic heating to the atmosphere above MABL. Our results indicate that warm eddies affect not only near-surface atmosphere but also free atmosphere, and possibly synoptic atmospheric variability. A detailed understanding of warm eddy-atmosphere interaction is necessary to improve in weather and climate projections.
Small scale exact coherent structures at large Reynolds numbers in plane Couette flow
NASA Astrophysics Data System (ADS)
Eckhardt, Bruno; Zammert, Stefan
2018-02-01
The transition to turbulence in plane Couette flow and several other shear flows is connected with saddle node bifurcations in which fully three-dimensional, nonlinear solutions to the Navier-Stokes equation, so-called exact coherent states (ECS), appear. As the Reynolds number increases, the states undergo secondary bifurcations and their time-evolution becomes increasingly more complex. Their spatial complexity, in contrast, remains limited so that these states cannot contribute to the spatial complexity and cascade to smaller scales expected for higher Reynolds numbers. We here present families of scaling ECS that exist on ever smaller scales as the Reynolds number is increased. We focus in particular on two such families for plane Couette flow, one centered near the midplane and the other close to a wall. We discuss their scaling and localization properties and the bifurcation diagrams. All solutions are localized in the wall-normal direction. In the spanwise and downstream direction, they are either periodic or localized as well. The family of scaling ECS localized near a wall is reminiscent of attached eddies, and indicates how self-similar ECS can contribute to the formation of boundary layer profiles.
Using the Cross-Correlation Function to Evaluate the Quality of Eddy-Covariance Data
NASA Astrophysics Data System (ADS)
Qi, Yongfeng; Shang, Xiaodong; Chen, Guiying; Gao, Zhiqiu; Bi, Xueyan
2015-11-01
A cross-correlation test is proposed for evaluating the quality of 30-min eddy-covariance data. Cross-correlation as a function of time lag is computed for vertical velocity paired with temperature, humidity, and carbon dioxide concentration. High quality data have a dominant peak at zero time lag and approach zero within a time lag of 20 s. Poor quality data have erratic cross-correlation functions, which indicates that the eddy flux may no longer represent the energy and mass exchange between the atmospheric surface layer and the canopy, and such data should be rejected in post-data analyses. Eddy-covariance data over grassland in July 2004 are used to evaluate the proposed test. The results show that 17, 29, and 36 % of the available data should be rejected because of poor quality measurements of sensible heat, latent heat, and CO2 fluxes, respectively. The rejected data mainly occurred on calm nights and day/night transitions when the atmospheric surface layer became stable or neutrally stratified. We found no friction velocity (u_*) threshold below which all data should be rejected, a test that many other studies have implemented for rejecting questionable data. We instead found that some data with low u_* were reliable, whereas other data with higher u_* were not. The poor quality measurements collected under less than ideal conditions were replaced by using the mean diurnal variation gap-filling method. The correction for poor quality data shifted the daily average CO2 flux by +0.34 g C m^{-2} day^{-1}. After applying the quality-control test, the eddy CO2 fluxes did not display a clear dependence on u_*. The results suggest that the cross-correlation test is a potentially valuable step in evaluating the quality of eddy-covariance data.
Yuan, W.; Liu, S.; Yu, G.; Bonnefond, J.-M.; Chen, J.; Davis, K.; Desai, A.R.; Goldstein, Allen H.; Gianelle, D.; Rossi, F.; Suyker, A.E.; Verma, S.B.
2010-01-01
The simulation of gross primary production (GPP) at various spatial and temporal scales remains a major challenge for quantifying the global carbon cycle. We developed a light use efficiency model, called EC-LUE, driven by only four variables: normalized difference vegetation index (NDVI), photosynthetically active radiation (PAR), air temperature, and the Bowen ratio of sensible to latent heat flux. The EC-LUE model may have the most potential to adequately address the spatial and temporal dynamics of GPP because its parameters (i.e., the potential light use efficiency and optimal plant growth temperature) are invariant across the various land cover types. However, the application of the previous EC-LUE model was hampered by poor prediction of Bowen ratio at the large spatial scale. In this study, we substituted the Bowen ratio with the ratio of evapotranspiration (ET) to net radiation, and revised the RS-PM (Remote Sensing-Penman Monteith) model for quantifying ET. Fifty-four eddy covariance towers, including various ecosystem types, were selected to calibrate and validate the revised RS-PM and EC-LUE models. The revised RS-PM model explained 82% and 68% of the observed variations of ET for all the calibration and validation sites, respectively. Using estimated ET as input, the EC-LUE model performed well in calibration and validation sites, explaining 75% and 61% of the observed GPP variation for calibration and validation sites respectively.Global patterns of ET and GPP at a spatial resolution of 0.5° latitude by 0.6° longitude during the years 2000–2003 were determined using the global MERRA dataset (Modern Era Retrospective-Analysis for Research and Applications) and MODIS (Moderate Resolution Imaging Spectroradiometer). The global estimates of ET and GPP agreed well with the other global models from the literature, with the highest ET and GPP over tropical forests and the lowest values in dry and high latitude areas. However, comparisons with observed GPP at eddy flux towers showed significant underestimation of ET and GPP due to lower net radiation of MERRA dataset. Applying a procedure to correct the systematic errors of global meteorological data would improve global estimates of GPP and ET. The revised RS-PM and EC-LUE models will provide the alternative approaches making it possible to map ET and GPP over large areas because (1) the model parameters are invariant across various land cover types and (2) all driving forces of the models may be derived from remote sensing data or existing climate observation networks.
Two-wavelength Method Estimates Heat fluxes over Heterogeneous Surface in North-China
NASA Astrophysics Data System (ADS)
Zhang, G.; Zheng, N.; Zhang, J.
2017-12-01
Heat fluxes is a key process of hydrological and heat transfer of soil-plant-atmosphere continuum (SPAC), and now it is becoming an important topic in meteorology, hydrology, ecology and other related research areas. Because the temporal and spatial variation of fluxes at regional scale is very complicated, it is still difficult to measure fluxes at the kilometer scale over a heterogeneous surface. A technique called "two-wavelength method" which combines optical scintillometer with microwave scintillometer is able to measure both sensible and latent heat fluxes over large spatial scales at the same time. The main purpose of this study is to investigate the fluxes over non-uniform terrain in North-China. Estimation of heat fluxes was carried out with the optical-microwave scintillometer and an eddy covariance (EC) system over heterogeneous surface in Tai Hang Mountains, China. EC method was set as a benchmark in the study. Structure parameters obtained from scintillometer showed that the typical measurement values of Cn2 are around 10-13 m-2/3 for microwave scintillometer, and values of Cn2 were around 10-15 m-2/3 for optical scintillometer. The correlation of heat fluxes (H) derived from scintillometer and EC system showed as a ratio of 1.05,and with R2=0.75, while the correlation of latent heat fluxes (LE) showed as 1.29 with R2=0.67. It was also found that heat fluxes derived from the two system showed good agreement (R2=0.9 for LE, R2=0.97 for H) when the Bowen ratio (β) was 1.03, while discrepancies showed significantly when β=0.75, and RMSD in H was 139.22 W/m2, 230.85 W/m2 in LE respectively.Experiment results in our research shows that, the two-wavelength method gives a larger heat fluxes over the study area, and a deeper study should be conduct. We expect that our investigate and analysis can be promoted the application of scintillometry method in regional evapotranspiration measurements and relevant disciplines.
Fei, Xuehai; Jin, Yanqiang; Zhang, Yiping; Sha, Liqing; Liu, Yuntong; Song, Qinghai; Zhou, Wenjun; Liang, Naishen; Yu, Guirui; Zhang, Leiming; Zhou, Ruiwu; Li, Jing; Zhang, Shubin; Li, Peiguang
2017-01-01
Savanna ecosystems play a crucial role in the global carbon cycle. However, there is a gap in our understanding of carbon fluxes in the savanna ecosystems of Southeast Asia. In this study, the eddy covariance technique (EC) and the biometric-based method (BM) were used to determine carbon exchange in a savanna ecosystem in Southwest China. The BM-based net ecosystem production (NEP) was 0.96 tC ha−1 yr−1. The EC-based estimates of the average annual gross primary productivity (GPP), ecosystem respiration (Reco), and net ecosystem carbon exchange (NEE) were 6.84, 5.54, and −1.30 tC ha−1 yr−1, respectively, from May 2013 to December 2015, indicating that this savanna ecosystem acted as an appreciable carbon sink. The ecosystem was more efficient during the wet season than the dry season, so that it represented a small carbon sink of 0.16 tC ha−1 yr−1 in the dry season and a considerable carbon sink of 1.14 tC ha−1 yr−1 in the wet season. However, it is noteworthy that the carbon sink capacity may decline in the future under rising temperatures and decreasing rainfall. Consequently, further studies should assess how environmental factors and climate change will influence carbon-water fluxes. PMID:28145459
NASA Astrophysics Data System (ADS)
Larson, B. F.; Lo, C. C. H.; Nakagawa, N.
2010-02-01
This paper reports on work conducted to investigate the effect that electrical discharge machining (EDM) notch width has on the eddy current (EC) signal as a function of coil drive frequency. The notch results are also compared to EC signals from laboratory-grown fatigue cracks. This study builds upon previous work with titanium, Inconel and aluminum materials where the signal amplitude was shown to decrease, as expected, as the notch width decreases. The trend was captured well by numerical results and this allowed estimates to be made about the signals from idealized "zero-width" notches. The results indicated that the signal reduction factor from a 0.127 mm (0.005 inch) wide, rectangular notch to a theoretical zero-width semi-elliptical notch of the same size ranged from 25 to 42% for low conductivity materials when data was collected at 2 MHz. For aluminum, the difference between signals from 0.127 mm wide notches and estimated signals for zero-width notches was approximately 50%. However, 2 MHz is an uncommonly high frequency for inspecting aluminum alloys so additional work was necessary to investigate the notch width effect at lower frequencies. This study sought to determine how the notch-width effect changed as a function of frequency for high conductivity materials such as aluminum.
NASA Astrophysics Data System (ADS)
Keenan, T. F.
2017-12-01
Global terrestrial ecosystems absorb about a third of anthropogenic emissions each year, due to the difference between two key processes: photosynthesis and respiration. Despite the importance of these two processes at the global scale, no direct measurement exists of either. Eddy-covariance (EC) measurements have been widely used as the closest `quasi-direct' observation, and the resulting estimates have been used to produce global budgets of photosynthesis and respiration. Recent research, however, suggests that current estimates may be biased by up to 25%, as the methods used to partition observed net carbon fluxes to photosynthesis and respiration do not take into account any inhibition of leaf respiration in light. Yet the prevalence of light-inhibition of leaf respiration remains debated, and impacts on global estimates of photosynthesis and respiration unquantified. Here, we use novel approaches to estimate the extent of light-inhibition across the global FLUXNET EC network, and find strong evidence for an inhibition effect on ecosystem respiration, which varies by season and plant functional type. We develop partitioning methods that allow for inhibition, and find that that diurnal patterns of ecosystem respiration might be markedly different than previously thought. The results call for the reevaluation of global terrestrial carbon cycle models, and also suggest that current global budgets of photosynthesis and respiration may be biased on the order of magnitude of anthropogenic fossil fuel emissions.
Annular modes and apparent eddy feedbacks in the Southern Hemisphere
NASA Astrophysics Data System (ADS)
Byrne, Nicholas J.; Shepherd, Theodore G.; Woollings, Tim; Plumb, R. Alan
2016-04-01
Lagged correlation analysis is often used to infer intraseasonal dynamical effects but is known to be affected by nonstationarity. We highlight a pronounced quasi 2 year peak in the anomalous zonal wind and eddy momentum flux convergence power spectra in the Southern Hemisphere, which is prima facie evidence for nonstationarity. We then investigate the consequences of this nonstationarity for the Southern Annular Mode and for eddy momentum flux convergence. We argue that positive lagged correlations previously attributed to the existence of an eddy feedback are more plausibly attributed to nonstationary interannual variability external to any potential feedback process in the midlatitude troposphere. The findings have implications for the diagnosis of feedbacks in both models and reanalysis data as well as for understanding the mechanisms underlying variations in the zonal wind.
Annular modes and apparent eddy feedbacks in the Southern Hemisphere.
Byrne, Nicholas J; Shepherd, Theodore G; Woollings, Tim; Plumb, R Alan
2016-04-28
Lagged correlation analysis is often used to infer intraseasonal dynamical effects but is known to be affected by nonstationarity. We highlight a pronounced quasi 2 year peak in the anomalous zonal wind and eddy momentum flux convergence power spectra in the Southern Hemisphere, which is prima facie evidence for nonstationarity. We then investigate the consequences of this nonstationarity for the Southern Annular Mode and for eddy momentum flux convergence. We argue that positive lagged correlations previously attributed to the existence of an eddy feedback are more plausibly attributed to nonstationary interannual variability external to any potential feedback process in the midlatitude troposphere. The findings have implications for the diagnosis of feedbacks in both models and reanalysis data as well as for understanding the mechanisms underlying variations in the zonal wind.
Evapotranspiration from areas of native vegetation in west-central Florida
Bidlake, W.R.; Woodham, W.M.; Lopez, M.A.
1993-01-01
A study was made to examine the suitability of three different micrometeorological methods for estimating evapotranspiration from selected areas of native vegetation in west-central Florida and to estimate annual evapotranspiration from those areas. Evapotranspiration was estimated using the energy- balance Bowen ratio and eddy correlation methods. Potential evapotranspiration was computed using the Penman equation. The energy-balance Bowen ratio method was used to estimate diurnal evapotrans- piration at unforested sites and yielded reasonable results; however, measurements indicated that the magnitudes of air temperature and vapor-pressure gradients above the forested sites were too small to obtain reliable evapotranspiration measurements with the energy balance Bowen ratio system. Analysis of the surface energy-balance indicated that sensible and latent heat fluxes computed using standard eddy correlation computation methods did not adequately account for available energy. Eddy correlation data were combined with the equation for the surface energy balance to yield two additional estimates of evapotranspiration. Daily potential evapotranspiration and evapotranspira- tion estimated using the energy-balance Bowen ratio method were not correlated at a unforested, dry prairie site, but they were correlated at a marsh site. Estimates of annual evapotranspiration for sites within the four vegetation types, which were based on energy-balance Bowen ratio and eddy correlation measurements, were 1,010 millimeters for dry prairie sites, 990 millimeters for marsh sites, 1,060 millimeters for pine flatwood sites, and 970 millimeters for a cypress swamp site.
Relating chamber measurements to eddy correlation measurements of methane flux
R.J. Clement; S.B. Verma; E.S. Verry
1995-01-01
Methane fluxes were measured using eddy correlation and chamber techniques during 1991 and 1997 at a peatland in north central Minnesota. Comparisons of the two techniques were made using averages of methane flux data available during 1-week periods. The seasonal patterns of fluxes measured by the two techniques compared well. Chamber flux, in 1991, was about 1.8 mg m...
A theoretically based determination of bowen-ratio fetch requirements
Stannard, D.I.
1997-01-01
Determination of fetch requirements for accurate Bowen-ratio measurements of latent- and sensible-heat fluxes is more involved than for eddy-correlation measurements because Bowen-ratio sensors are located at two heights, rather than just one. A simple solution to the diffusion equation is used to derive an expression for Bowen-ratio fetch requirements, downwind of a step change in surface fluxes. These requirements are then compared to eddy-correlation fetch requirements based on the same diffusion equation solution. When the eddy-correlation and upper Bowen-ratio sensor heights are equal, and the available energy upwind and downwind of the step change is constant, the Bowen-ratio method requires less fetch than does eddy correlation. Differences in fetch requirements between the two methods are greatest over relatively smooth surfaces. Bowen-ratio fetch can be reduced significantly by lowering the lower sensor, as well as the upper sensor. The Bowen-ratio fetch model was tested using data from a field experiment where multiple Bowen-ratio systems were deployed simultaneously at various fetches and heights above a field of bermudagrass. Initial comparisons were poor, but improved greatly when the model was modified (and operated numerically) to account for the large roughness of the upwind cotton field.
Evaluating Emergent Constraints for Equilibrium Climate Sensitivity
Caldwell, Peter M.; Zelinka, Mark D.; Klein, Stephen A.
2018-04-23
Emergent constraints are quantities that are observable from current measurements and have skill predicting future climate. Here, this study explores 19 previously proposed emergent constraints related to equilibrium climate sensitivity (ECS; the global-average equilibrium surface temperature response to CO 2 doubling). Several constraints are shown to be closely related, emphasizing the importance for careful understanding of proposed constraints. A new method is presented for decomposing correlation between an emergent constraint and ECS into terms related to physical processes and geographical regions. Using this decomposition, one can determine whether the processes and regions explaining correlation with ECS correspond to the physicalmore » explanation offered for the constraint. Shortwave cloud feedback is generally found to be the dominant contributor to correlations with ECS because it is the largest source of intermodel spread in ECS. In all cases, correlation results from interaction between a variety of terms, reflecting the complex nature of ECS and the fact that feedback terms and forcing are themselves correlated with each other. For 4 of the 19 constraints, the originally proposed explanation for correlation is borne out by our analysis. These four constraints all predict relatively high climate sensitivity. The credibility of six other constraints is called into question owing to correlation with ECS coming mainly from unexpected sources and/or lack of robustness to changes in ensembles. Another six constraints lack a testable explanation and hence cannot be confirmed. Lastly, the fact that this study casts doubt upon more constraints than it confirms highlights the need for caution when identifying emergent constraints from small ensembles.« less
Evaluating Emergent Constraints for Equilibrium Climate Sensitivity
DOE Office of Scientific and Technical Information (OSTI.GOV)
Caldwell, Peter M.; Zelinka, Mark D.; Klein, Stephen A.
Emergent constraints are quantities that are observable from current measurements and have skill predicting future climate. Here, this study explores 19 previously proposed emergent constraints related to equilibrium climate sensitivity (ECS; the global-average equilibrium surface temperature response to CO 2 doubling). Several constraints are shown to be closely related, emphasizing the importance for careful understanding of proposed constraints. A new method is presented for decomposing correlation between an emergent constraint and ECS into terms related to physical processes and geographical regions. Using this decomposition, one can determine whether the processes and regions explaining correlation with ECS correspond to the physicalmore » explanation offered for the constraint. Shortwave cloud feedback is generally found to be the dominant contributor to correlations with ECS because it is the largest source of intermodel spread in ECS. In all cases, correlation results from interaction between a variety of terms, reflecting the complex nature of ECS and the fact that feedback terms and forcing are themselves correlated with each other. For 4 of the 19 constraints, the originally proposed explanation for correlation is borne out by our analysis. These four constraints all predict relatively high climate sensitivity. The credibility of six other constraints is called into question owing to correlation with ECS coming mainly from unexpected sources and/or lack of robustness to changes in ensembles. Another six constraints lack a testable explanation and hence cannot be confirmed. Lastly, the fact that this study casts doubt upon more constraints than it confirms highlights the need for caution when identifying emergent constraints from small ensembles.« less
Analytical model of tilted driver–pickup coils for eddy current nondestructive evaluation
NASA Astrophysics Data System (ADS)
Cao, Bing-Hua; Li, Chao; Fan, Meng-Bao; Ye, Bo; Tian, Gui-Yun
2018-03-01
A driver-pickup probe possesses better sensitivity and flexibility due to individual optimization of a coil. It is frequently observed in an eddy current (EC) array probe. In this work, a tilted non-coaxial driver-pickup probe above a multilayered conducting plate is analytically modeled with spatial transformation for eddy current nondestructive evaluation. Basically, the core of the formulation is to obtain the projection of magnetic vector potential (MVP) from the driver coil onto the vector along the tilted pickup coil, which is divided into two key steps. The first step is to make a projection of MVP along the pickup coil onto a horizontal plane, and the second one is to build the relationship between the projected MVP and the MVP along the driver coil. Afterwards, an analytical model for the case of a layered plate is established with the reflection and transmission theory of electromagnetic fields. The calculated values from the resulting model indicate good agreement with those from the finite element model (FEM) and experiments, which validates the developed analytical model. Project supported by the National Natural Science Foundation of China (Grant Nos. 61701500, 51677187, and 51465024).
NASA Astrophysics Data System (ADS)
Achiman, Ori; Mekhmandarov, Yonatan; Pirkner, Moran; Tanny, Josef
2016-04-01
Previous studies have established that the eddy covariance (EC) technique is reliable for whole canopy flux measurements in agricultural crops covered by porous screens, i.e., screenhouses. Nevertheless, the eddy covariance technique remains difficult to apply in the farm due to costs, operational complexity, and post-processing of data - thereby inviting alternative techniques to be developed. The subject of this research was estimating the sensible heat flux by two turbulent transport techniques, namely, Flux-Variance (FV) and Half-order Time Derivative (HTD) whose instrumentation needs and operational demands are not as elaborate as the EC. The FV is based on the standard deviation of high frequency temperature measurements and a similarity constant CT. The HTD method requires mean air temperature and air velocity data. Measurements were carried out in two types of screenhouses: (i) a banana plantation in a light shading (8%) screenhouse; (ii) a pepper crop in a dense insect-proof (50-mesh) screenhouse. In each screenhouse an EC system was deployed for reference and high frequency air temperature measurements were conducted using miniature thermocouples installed at several levels to identify the optimal measurement height. Quality control analysis showed that turbulence development and flow stationarity conditions in the two structures were suitable for flux measurements by the EC technique. Energy balance closure slopes in the two screenhouses were larger than 0.71, in agreement with results for open fields. Regressions between sensible heat flux measured by EC and estimated by FV resulted with CT values that were usually larger than 1, the typical value for open field. In both shading and insect-proof screenhouses the CT value generally increased with height. The optimal measurement height, defined as the height with maximum R2 of the regression between EC and FV sensible heat fluxes, was just above the screen. CT value at optimal height was 2.64 and 1.52 for the shading and insect-proof screenhouses, respectively, with R2 = 0.73 in both types of structures. FV data analysis of the temperature signal at frequencies lower than 10 Hz showed that R2 of these regressions was insensitive to the data analysis frequency up to 0.5 Hz. This suggests that turbulent transport in the screenhouses was governed by large scale vortices. Regressions between EC and HTD sensible heat fluxes resulted with R2 which slightly decreased with height and had values between 0.3 and 0.4 for both screenhouses. The regression slopes also decreased with height and had values between 0.4 and 0.6. We conclude that in screenhouses the FV technique provides a more reliable estimate of the sensible heat flux than the HTD; however, the latter is simpler and more robust in terms of equipment, operation and data analysis and hence may be more attainable for day-to-day use by the growers.
NASA Astrophysics Data System (ADS)
Velasco, E.; Grivicke, R.; Pressley, S.; Allwine, G.; Jobson, T.; Westberg, H.; Lamb, B.; Ramos, R.; Molina, L.
2007-12-01
Direct measurements of emissions of pollutant gases that include all major and minor emissions sources in urban areas are a missing requirement to improve and evaluate emissions inventories. The quality of an urban emissions inventory relies on the accuracy of the information of anthropogenic activities, which in many cases is not available, in particular in urban areas of developing countries. As part of the MCMA-2003 field campaign, we demonstrated the feasibility of using eddy covariance (EC) techniques coupled with fast-response sensors to measure fluxes of volatile organic compounds (VOCs) and CO2 from a residential district of Mexico City. Those flux measurements demonstrated to be also a valuable tool to evaluate the emissions inventory used for air quality modeling. With the objective to confirm the representativeness of the 2003 flux measurements in terms of magnitude, composition and diurnal distribution, as well to evaluate the most recent emissions inventory, a second flux system was deployed in a different district of Mexico City during the 2006 MILAGRO field campaign. This system was located in a busy district surrounded by congested avenues close to the center of the city. In 2003 and 2006 fluxes of olefins and CO2 were measured by the EC technique using a Fast Isoprene Sensor calibrated with a propylene standard and an open path Infrared Gas Analyzer (IRGA), respectively. Fluxes of aromatic and oxygenated VOCs were analyzed by Proton Transfer Reaction-Mass Spectroscopy (PTR-MS) and the disjunct eddy covariance (DEC) technique. In 2006 the number of VOCs was extended using a disjunct eddy accumulation (DEA) system. This system collected whole air samples as function of the direction of the vertical wind component, and the samples were analyzed on site by gas chromatography / flame ionization detection (GC-FID). In both studies we found that the urban surface is a net source of CO2 and VOCs. The diurnal patterns were similar, but the 2006 fluxes showed higher magnitudes. This difference was due to the different characteristics of the monitored sites rather than an increment of the emissions over a 3-year period. The diurnal patterns of VOCs and CO2 fluxes were strongly related to vehicular traffic. Toluene and methanol fluxes also exhibited a strong influence from non-mobile sources; in particular the 2006 flux measurements were influenced on some days by the application of a resin to the sidewalks in the neighborhood near the flux tower. The fluxes of individual hydrocarbons measured by DEA showed good agreement with the fluxes measured by EC and DEC which demonstrates that the DEA method is valuable for flux measurements of additional individual species. Finally, the comparisons between the measured fluxes of VOCs and the emissions reported by the emissions inventory for the monitored sector of the city showed that these last were within the observed variability of the measured fluxes.
Self similarity of two point correlations in wall bounded turbulent flows
NASA Technical Reports Server (NTRS)
Hunt, J. C. R.; Moin, P.; Moser, R. D.; Spalart, P. R.
1987-01-01
The structure of turbulence at a height y from a wall is affected by the local mean shear at y, by the direct effect of the wall on the eddies, and by the action of other eddies close to or far from the wall. Some researchers believe that a single one of these mechanisms is dominant, while others believe that these effects have to be considered together. It is important to understand the relative importance of these effects in order to develop closure models, for example for the dissipation or for the Reynolds stress equation, and to understand the eddy structure of cross correlation functions and other measures. The specific objective was to examine the two point correlation, R sub vv, of the normal velocity component v near the wall in a turbulent channel flow and in a turbulent boundary layer. The preliminary results show that even in the inhomogeneous turbulent boundary layer, the two-point correlation function may have self similar forms. The results also show that the effects of shear and of blocking are equally important in the form of correlation functions for spacing normal to the wall. But for spanwise spacing, it was found that the eddy structure is quire different in these near flows. So any theory for turbulent structure must take both these effects into account.
Eddy covariance measurements of net C exchange in the CAM bioenergy crop, Agave tequiliana
NASA Astrophysics Data System (ADS)
Owen, Nick A.; Choncubhair, Órlaith Ní; Males, Jamie; del Real Laborde, José Ignacio; Rubio-Cortés, Ramón; Griffiths, Howard; Lanigan, Gary
2016-04-01
Bioenergy crop cultivation may focus more on low grade and marginal lands in order to avoid competition with food production for land and water resources. However, in many regions, this would require improvements in plant water-use efficiency that are beyond the physiological capacity of most C3 and C4 bioenergy crop candidates. Crassulacean acid metabolism (CAM) plants, such as Agave tequiliana, can combine high above-ground productivity with as little as 20% of the water demand of C3 and C4 crops. This is achieved through temporal separation of carboxylase activities, with stomata opening at night to allow gas exchange and minimise transpirational losses. Previous studies have employed 'bottom-up' methodologies to investigate carbon (C) accumulation and productivity in Agave, by scaling leaf-level gas exchange and titratable acidity (TA) with leaf area index or maximum productivity. We used the eddy covariance (EC) technique to quantify ecosystem-scale gas exchange over an Agave plantation in Mexico ('top-down' approach). Measurements were made over 252 days, including the transition from wet to dry periods. Results were cross-validated against diel changes in titratable acidity, leaf-unfurling rates, energy exchange fluxes and reported biomass yields. Net ecosystem exchange of CO2 displayed a CAM rhythm that alternated from a net C sink at night to a net C source during the day and partitioned canopy fluxes (gross C assimilation, FA,EC) showed a characteristic four-phase CO2 exchange pattern. The projected ecosystem C balance indicated that the site was a net sink of -333 ± 24 g C m-2 y-1, comprising cumulative soil respiration of 692 ± 7 g C m-2 y-1 and FA,EC of -1025 ± 25 g C m-2 y-1. EC-estimated biomass yield was 20.1 Mg ha-1 y-1. Average integrated daily FA,EC was -234 ± 5 mmol CO2 m-2 d-1 and persisted almost unchanged after 70 days of drought conditions. Our results suggest that the carbon acquisition strategy of drought avoidance employed by Agave and other CAM plants could offer significant yield advantages over conventional arid and semi-arid C3 and C4 bioenergy crops. Furthermore, their capacity for high productivity on marginal land and drought resilience suggest that CAM plants could play an important role in addressing conflicting land and water resource allocation issues.
DOE Office of Scientific and Technical Information (OSTI.GOV)
Jin, Cui; Xiao, Xiangming; Wagle, Pradeep
2015-11-01
Satellite-based Production Efficiency Models (PEMs) often require meteorological reanalysis data such as the North America Regional Reanalysis (NARR) by the National Centers for Environmental Prediction (NCEP) as model inputs to simulate Gross Primary Production (GPP) at regional and global scales. This study first evaluated the accuracies of air temperature (TNARR) and downward shortwave radiation (RNARR) of the NARR by comparing with in-situ meteorological measurements at 37 AmeriFlux non-crop eddy flux sites, then used one PEM – the Vegetation Photosynthesis Model (VPM) to simulate 8-day mean GPP (GPPVPM) at seven AmeriFlux crop sites, and investigated the uncertainties in GPPVPM from climatemore » inputs as compared with eddy covariance-based GPP (GPPEC). Results showed that TNARR agreed well with in-situ measurements; RNARR, however, was positively biased. An empirical linear correction was applied to RNARR, and significantly reduced the relative error of RNARR by ~25% for crop site-years. Overall, GPPVPM calculated from the in-situ (GPPVPM(EC)), original (GPPVPM(NARR)) and adjusted NARR (GPPVPM(adjNARR)) climate data tracked the seasonality of GPPEC well, albeit with different degrees of biases. GPPVPM(EC) showed a good match with GPPEC for maize (Zea mays L.), but was slightly underestimated for soybean (Glycine max L.). Replacing the in-situ climate data with the NARR resulted in a significant overestimation of GPPVPM(NARR) (18.4/29.6% for irrigated/rainfed maize and 12.7/12.5% for irrigated/rainfed soybean). GPPVPM(adjNARR) showed a good agreement with GPPVPM(EC) for both crops due to the reduction in the bias of RNARR. The results imply that the bias of RNARR introduced significant uncertainties into the PEM-based GPP estimates, suggesting that more accurate surface radiation datasets are needed to estimate primary production of terrestrial ecosystems at regional and global scales.« less
NASA Astrophysics Data System (ADS)
Boudhina, Nissaf; Zitouna-Chebbi, Rim; Mekki, Insaf; Jacob, Frédéric; Ben Mechlia, Nétij; Masmoudi, Moncef; Prévot, Laurent
2018-06-01
Estimating evapotranspiration in hilly watersheds is paramount for managing water resources, especially in semiarid/subhumid regions. The eddy covariance (EC) technique allows continuous measurements of latent heat flux (LE). However, time series of EC measurements often experience large portions of missing data because of instrumental malfunctions or quality filtering. Existing gap-filling methods are questionable over hilly crop fields because of changes in airflow inclination and subsequent aerodynamic properties. We evaluated the performances of different gap-filling methods before and after tailoring to conditions of hilly crop fields. The tailoring consisted of splitting the LE time series beforehand on the basis of upslope and downslope winds. The experiment was setup within an agricultural hilly watershed in northeastern Tunisia. EC measurements were collected throughout the growth cycle of three wheat crops, two of them located in adjacent fields on opposite hillslopes, and the third one located in a flat field. We considered four gap-filling methods: the REddyProc method, the linear regression between LE and net radiation (Rn), the multi-linear regression of LE against the other energy fluxes, and the use of evaporative fraction (EF). Regardless of the method, the splitting of the LE time series did not impact the gap-filling rate, and it might improve the accuracies on LE retrievals in some cases. Regardless of the method, the obtained accuracies on LE estimates after gap filling were close to instrumental accuracies, and they were comparable to those reported in previous studies over flat and mountainous terrains. Overall, REddyProc was the most appropriate method, for both gap-filling rate and retrieval accuracy. Thus, it seems possible to conduct gap filling for LE time series collected over hilly crop fields, provided the LE time series are split beforehand on the basis of upslope-downslope winds. Future works should address consecutive vegetation growth cycles for a larger panel of conditions in terms of climate, vegetation, and water status.
Krauss, Ken W.; Holm, Guerry O.; Perez, Brian C.; McWhorter, David E.; Cormier, Nicole; Moss, Rebecca; Johnson, Darren; Neubauer, Scott C; Raynie, Richard C
2016-01-01
Coastal marshes take up atmospheric CO2 while emitting CO2, CH4, and N2O. This ability to sequester carbon (C) is much greater for wetlands on a per-area basis than from most ecosystems, facilitating scientific, political, and economic interest in their value as greenhouse gas sinks. However, the greenhouse gas balance of Gulf of Mexico wetlands is particularly understudied. We describe the net ecosystem exchange (NEEc) of CO2 and CH4 using eddy covariance (EC) in comparison with fluxes of CO2, CH4, and N2O using chambers from brackish and freshwater marshes in Louisiana, USA. From EC, we found that 182 g C m-2 y-1 was lost through NEEc from the brackish marsh. Of this, 11 g C m-2 y-1 resulted from net CH4 emissions and the remaining 171 g C m-2 y-1 resulted from net CO2 emissions. In contrast, -290 g C m2 y-1 was taken up through NEEc by the freshwater marsh, with 47 g C m-2 y-1 emitted as CH4 and -337 g C m-2 y-1 taken up as CO2. From chambers, we discovered that neither site had large fluxes of N2O. Sustained-flux greenhouse gas accounting metrics indicated that both marshes had a positive (warming) radiative balance, with the brackish marsh having a substantially greater warming effect than the freshwater marsh. That net respiratory emissions of CO2 and CH4 as estimated through chamber techniques were 2-4 times different from emissions estimated through EC requires additional understanding of the artifacts created by different spatial and temporal sampling footprints between techniques.
The influence of mesoscale and submesoscale heterogeneity on ocean biogeochemical reactions
NASA Astrophysics Data System (ADS)
Levy, M.; Martin, A. P.
2013-12-01
The oceanic circulation in the meso to submesoscale regime generates heterogeneity in the concentrations of biogeochemical components over these scales, horizontally between 1 and 100 km. Due to nonlinearities in the biogeochemical reactions, such as phytoplankton primary production and zooplankton grazing, this small-scale heterogeneity can lead to departure from the mean field approximation, whereby plankton reactions are evaluated from mean distributions at coarser scale. Here we explore the magnitude of these eddy reactions and compare their strength to those of the more widely studied eddy transports. We use the term eddy to denote effects arising from scales smaller than ˜ 100 km. This is done using a submesoscale permitting biogeochemical model, representative of the seasonally varying subtropical and subpolar gyres. We found that the eddy reactions associated with primary production and grazing account for ±5-30% of productivity and grazing, respectively, depending on location and time of year, and are scale dependent: two thirds are due to heterogeneities at scales 30-100 km and one third to those at scales below 30 km. Moreover, eddy productivities are systematically negative, implying that production tends to be reduced by nonlinear interactions at the mesoscale and smaller. The opposite result is found for eddy grazing, which is generally positive. The contrasting effects result from vertical advection, which negatively correlates phytoplankton and nutrients and positively correlates phytoplankton and zooplankton in the meso to submesoscale range. Moreover, our results highlight the central role played by eddy reactions for ecological aspects and the distribution of organisms and by eddy transport for biogeochemical aspects and nutrient budgets.
NASA Astrophysics Data System (ADS)
Martin, Adrian P.; Lévy, Marina; van Gennip, Simon; Pardo, Silvia; Srokosz, Meric; Allen, John; Painter, Stuart C.; Pidcock, Roz
2015-09-01
Numerous observations demonstrate that considerable spatial variability exists in components of the marine planktonic ecosystem at the mesoscale and submesoscale (100 km-1 km). The causes and consequences of physical processes at these scales ("eddy advection") influencing biogeochemistry have received much attention. Less studied, the nonlinear nature of most ecological and biogeochemical interactions means that such spatial variability has consequences for regional estimates of processes including primary production and grazing, independent of the physical processes. This effect has been termed "eddy reactions." Models remain our most powerful tools for extrapolating hypotheses for biogeochemistry to global scales and to permit future projections. The spatial resolution of most climate and global biogeochemical models means that processes at the mesoscale and submesoscale are poorly resolved. Modeling work has previously suggested that the neglected eddy reactions may be almost as large as the mean field estimates in some cases. This study seeks to quantify the relative size of eddy and mean reactions observationally, using in situ and satellite data. For primary production, grazing, and zooplankton mortality the eddy reactions are between 7% and 15% of the mean reactions. These should be regarded as preliminary estimates to encourage further observational estimates and not taken as a justification for ignoring eddy reactions. Compared to modeling estimates, there are inconsistencies in the relative magnitude of eddy reactions and in correlations which are a major control on their magnitude. One possibility is that models exhibit much stronger spatial correlations than are found in reality, effectively amplifying the magnitude of eddy reactions.
NASA Astrophysics Data System (ADS)
Zeeman, M. J.; Wolz, K.; Adler, B.; Brenner, C.; De Roo, F.; Emeis, S.; Kalthoff, N.; Mauder, M.; Schäfer, K.; Wohlfahrt, G.; Zhao, P.
2016-12-01
We investigated biosphere-atmosphere exchange processes in relation to the atmospheric boundary-layer (ABL) flow in a shallow valley. Land-use heterogeneity and topography can force local atmospheric flow patterns, including local circulations. Such flow patterns can impair current techniques for the quantification and source attribution of surface-exchange fluxes due to flux-divergence, advection and decoupling. Wind field, temperature and humidity structures in the ABL were observed in high resolution with spatially distributed observations in a 1 km3 experimental domain. Remote-sensing observations of wind, temperature and particles in the ABL (Raman-lidar; RASS; ceilometer; microwave radiometer; 3D Doppler-lidar) were combined with a high-resolution network of in-situ observations that included vertical and horizontal profiles of wind, temperature, carbon dioxide, methane and water vapor concentrations. The experiments were co-located with the long-term eddy covariance (EC) observatory Fendt (DE-Fen; ICOS, TERENO) and were part of international cooperative efforts in 2015 and 2016 (the ScaleX campaigns). The gathered experimental data offers a scale-transcending insight in local flow patterns in mountainous terrain and their influence on surface-exchange fluxes of energy and matter as observed by EC and flux-gradient methodology. In addition, the data is used for validation of Large-Eddy Simulations in complex terrain using PALM-LES. Within this modelling framework, virtual measurements are conducted to further assess the importance of three-dimensional advective and horizontal turbulent transport terms.
Modeling space-time correlations of velocity fluctuations in wind farms
NASA Astrophysics Data System (ADS)
Lukassen, Laura J.; Stevens, Richard J. A. M.; Meneveau, Charles; Wilczek, Michael
2018-07-01
An analytical model for the streamwise velocity space-time correlations in turbulent flows is derived and applied to the special case of velocity fluctuations in large wind farms. The model is based on the Kraichnan-Tennekes random sweeping hypothesis, capturing the decorrelation in time while including a mean wind velocity in the streamwise direction. In the resulting model, the streamwise velocity space-time correlation is expressed as a convolution of the pure space correlation with an analytical temporal decorrelation kernel. Hence, the spatio-temporal structure of velocity fluctuations in wind farms can be derived from the spatial correlations only. We then explore the applicability of the model to predict spatio-temporal correlations in turbulent flows in wind farms. Comparisons of the model with data from a large eddy simulation of flow in a large, spatially periodic wind farm are performed, where needed model parameters such as spatial and temporal integral scales and spatial correlations are determined from the large eddy simulation. Good agreement is obtained between the model and large eddy simulation data showing that spatial data may be used to model the full temporal structure of fluctuations in wind farms.
NASA Astrophysics Data System (ADS)
Swett, M. P.; Amirbahman, A.; Boss, E.
2009-12-01
Wetland and estuarine sediments release significant amounts of dissolved organic carbon (DOC) due to high levels of microbial activity, particularly sulfate reduction. Changes in climate and hydrologic conditions have a potential to alter DOC release from these systems as well. This is a concern, as high levels of DOC can lead to mobilization of toxic metals and organics in natural waters. In addition, source waters high in DOC produce undesirable disinfection byproducts in water treatment. Various in situ methods, such as peepers and sediment core centrifugation, exist to quantify vertical benthic fluxes of DOC and other dissolved species from the sediment-water interface (SWI). These techniques, however, are intrusive and involve disturbance of the sediment environment. Eddy-correlation allows for real-time, non-intrusive, in situ flux measurement of important analytes, such as O2 and DOC. An Acoustic Doppler Velocimeter (ADV) is used to obtain three-dimensional fluid velocity measurements. The eddy-correlation technique employs the mathematical separation of fluid velocity into mean velocity and fluctuating velocity components, with the latter representing turbulent eddy velocity. DOC concentrations are measured using a colored dissolved organic matter (CDOM) fluorometer, and instantaneous vertical flux is determined from the correlated data. This study assesses DOC flux at three project sites: a beaver pond in the Lower Penobscot Watershed, Maine; a mudflat in Penobscot River, Maine; and a mudflat in Great Bay, New Hampshire. Eddy flux values are compared with results obtained using peepers and centrifugation, as well as vertical profiling.
NASA Astrophysics Data System (ADS)
Mroos, Katja; Baroni, Gabriele; Er-Raki, Salah; Francke, Till; Khabba, Said; Jarlan, Lionel; Hanich, Lahoucine; Oswald, Sascha E.
2014-05-01
Irrigation water requirement plays a crucial role in many agricultural areas and especially in arid and semi-arid landscapes. Improvements in the water management and the performance of the irrigation systems require a correct evaluation of the hydrological processes involved. However, some difficulties can arise due to the heterogeneity of the soil-plant system and of the irrigation scheme. To overcome these limitations, in this study, the soil water balance is analyzed by the combination of the Eddy Covariance technique (EC) and Cosmic Ray neutron Sensing (CRS). EC provides the measurement of the actual evapotranspiration over the area as it was presented in many field conditions. Moreover CRS showed to be a valuable approach to measure the root zone soil moisture integrated in a footprint of ~30 ha. In this way, the combination of the two methodologies should provide a better analysis of the soil water balance at field scale, as opposed to point observations, e.g. by TDR, evaporimeter and fluxmeter. Then, this could increase the capability to assess the irrigation efficiency and the agricultural water management. The study is conducted in a citrus orchard situated in a semi-arid region, 30 km southwest of Marrakesh (Morocco). The site is flat and planted with trees of same age growing in parallel rows with drip irrigation lines and application of fertilizer and pesticides. The original soil seems modified on the surface by the agricultural use, creating differences between trees, rows and lines. In addition, the drip irrigation creates also a spatial variability of the water flux distribution in the field, making this site an interesting area to test the methodology. Particular attention is given to the adaptation of the standard soil sampling campaign used for the calibration of the CRS and the introduction of a weighing function. Data were collected from June to December 2013, which corresponds to the high plant transpiration. Despite the intention of the farmer to maintain constant soil water contents in the root zone throughout the period, the CRS results showed a relatively strong dynamic of the soil water conditions at field scale and respond well to the EC measurements. Strong spatial heterogeneities and the difficulties of direct comparison between the different scales of measurements pose a challenge for full quantification of the water balance. Further analysis will address the assessment of the irrigation efficiency at different scales and of deep percolation. Keywords: Cosmic Ray Sensing, deep percolation, Eddy Covariance, evapotranspiration, irrigation, Morocco, soil moisture, semi-arid;
Urban Evapotranspiration and Carbon Dioxide Flux in Miami - Dade, Florida
NASA Astrophysics Data System (ADS)
Bernier, T.; Hopper, W.
2010-12-01
Atmospheric Carbon Dioxide (CO2) concentrations are leading indicators of secular climate change. With increasing awareness of the consequences of climate change, methods for monitoring this change are becoming more important daily. Of particular interest is the carbon dioxide exchange between natural and urban landscapes and the correlation of atmospheric CO2 concentrations. Monitoring Evapotranspiration (ET) is important for assessments of water availability for growing populations. ET is surprisingly understudied in the hydrologic cycle considering ET removes as much as 80 to over 100% of precipitation back into the atmosphere as water vapor. Lack of understanding in spatial and temporal ET estimates can limit the credibility of hydrologic water budgets designed to promote sustainable water use and resolve water-use conflicts. Eddy covariance (EC) methods are commonly used to estimate ET and CO2 fluxes. The EC platform consist of a (CSAT) 3-D Sonic Anemometer and a Li-Cor Open Path CO2/ H2O Analyzer. Measurements collected at 10 Hz create a very large data sets. A EC flux tower located in the Snapper Creek Well Field as part of a study to estimate ET for the Miami Dade County Water and Sewer project. Data has been collected from December 17, 2009 to August 30, 2010. QA/QC is performed with the EdiRe data processing software according to Ameri-flux protocols. ET estimates along with other data--latent-heat flux, sensible-heat flux, rainfall, air temperature, wind speed and direction, solar irradiance, net radiation, soil-heat flux and relative humidity--can be used to aid in the development of water management policies and regulations. Currently, many financial institutions have adopted an understanding about baseline environmental monitoring. The “Equator Principle” is an example of a voluntary standard for managing social and environmental risk in project financing and has changed the way in which projects are financed.
Sample support and resistivity imaging interpretation
NASA Astrophysics Data System (ADS)
Bentley, L. R.; Gharibi, M.
2003-04-01
Three-D Electrical Resistivity Imaging (ERI) is a powerful technique that can be used to improve site characterization. In order to integrate ERI with other site characterization measurements such as soil and water chemistry, it is necessary to understand the sample support of various data. We have studied a decommissioned sour gas processing plant which has experienced releases of glycol and amine. Ammonium and acetic acid are degradation products that cause elevated electrical conductivity (EC) in groundwater and soils.The site is underlain by glacial till that is fractured and has thin sand lenses. 3-D ERI inversion results, direct push tool EC and core EC from the same location are well correlated. However, groundwater EC from piezometer installations are poorly correlated with ERI EC. We hypothesize that the ERI, direct push and core EC are mainly meausuring relatively immobile pore water EC in the fine grain matrix. Piezometer water is derived from mobile groundwater that travels in preferred flow paths such as fractures and higher permeability sand lenses. Due to dewatering and other remediation efforts, the mobile groundwater can have a different chemistry, concentration and EC than the immobile pore water. Consequently, the sample support is different for the groundwater samples and the difference explains the poor correlation between ERI EC and groundwater sample EC. In this particular case, we have the potential to monitor the chemical evolution of the source areas, but cannot use ERI to monitor the chemical evolution of mobile groundwater.
DOE Office of Scientific and Technical Information (OSTI.GOV)
Hagos, Samson M.; Leung, Lai-Yung R.; Gustafson, William I.
2014-02-28
A multi-scale moisture budget analysis is used to identify the mechanisms responsible for the sensitivity of the water cycle to spatial resolution using idealized regional aquaplanet simulations. In the higher resolution simulations, moisture transport by eddies fluxes dry the boundary layer enhancing evaporation and precipitation. This effect of eddies, which is underestimated by the physics parameterizations in the low-resolution simulations, is found to be responsible for the sensitivity of the water cycle both directly, and through its upscale effect, on the mean circulation. Correlations among moisture transport by eddies at adjacent ranges of scales provides the potential for reducing thismore » sensitivity by representing the unresolved eddies by their marginally resolved counterparts.« less
H2O and CO2 fluxes at the floor of a boreal pine forest
NASA Astrophysics Data System (ADS)
Kulmala, Liisa; Launiainen, Samuli; Pumpanen, Jukka; Lankreijer, Harry; Lindroth, Anders; Hari, Pertti; Vesala, Timo
2008-04-01
We measured H2O and CO2 fluxes at a boreal forest floor using eddy covariance (EC) and chamber methods. Maximum evapotranspiration measured with EC ranged from 1.5 to 2.0mmol m-2 s-1 while chamber estimates depended substantially on the location and the vegetation inside the chamber. The daytime net CO2 exchange measured with EC (0-2μmol m-2 s-1) was of the same order as measured with the chambers. The nocturnal net CO2 exchange measured with the chambers ranged from 4 to 7μmol m-2 s-1 and with EC from ~4 to ~5μmol m-2 s-1 when turbulent mixing below the canopy was sufficient and the measurements were reliable. We studied gross photosynthesis by measuring the light response curves of the most common forest floor species and found the saturated rates of photosynthesis (Pmax) to range from 0.008 (mosses) to 0.184μmol g-1 s-1 (blueberry). The estimated gross photosynthesis at the study site based on average leaf masses and the light response curves of individual plant species was 2-3μmol m-2 s-1. At the same time, we measured a whole community with another chamber and found maximum gross photosynthesis rates from 4 to 7μmol m-2 s-1.
NASA Astrophysics Data System (ADS)
Alfieri, Joseph G.; Kustas, William P.; Prueger, John H.; Hipps, Lawrence E.; Evett, Steven R.; Basara, Jeffrey B.; Neale, Christopher M. U.; French, Andrew N.; Colaizzi, Paul; Agam, Nurit; Cosh, Michael H.; Chavez, José L.; Howell, Terry A.
2012-12-01
Discrepancies can arise among surface flux measurements collected using disparate techniques due to differences in both the instrumentation and theoretical underpinnings of the different measurement methods. Using data collected primarily within a pair of irrigated cotton fields as a part of the 2008 Bushland Evapotranspiration and Remote Sensing Experiment (BEAREX08), flux measurements collected with two commonly-used methods, eddy covariance (EC) and lysimetry (LY), were compared and substantial differences were found. Daytime mean differences in the flux measurements from the two techniques could be in excess of 200 W m-2 under strongly advective conditions. Three causes for this disparity were found: (i) the failure of the eddy covariance systems to fully balance the surface energy budget, (ii) flux divergence due to the local advection of warm, dry air over the irrigated cotton fields, and (iii) the failure of lysimeters to accurately represent the surface properties of the cotton fields as a whole. Regardless of the underlying cause, the discrepancy among the flux measurements underscores the difficulty in collecting these measurements under strongly advective conditions. It also raises awareness of the uncertainty associated with in situ micrometeorological measurements and the need for caution when using such data for model validation or as observational evidence to definitively support or refute scientific hypotheses.
NASA Astrophysics Data System (ADS)
Song, Yi; Wang, Jiemin; Yang, Kun; Ma, Mingguo; Li, Xin; Zhang, Zhihui; Wang, Xufeng
2012-07-01
Estimating evapotranspiration (ET) is required for many environmental studies. Remote sensing provides the ability to spatially map latent heat flux. Many studies have developed approaches to derive spatially distributed surface energy fluxes from various satellite sensors with the help of field observations. In this study, remote-sensing-based λE mapping was conducted using a Landsat Thematic Mapper (TM) image and an Enhanced Thematic Mapper Plus (ETM+) image. The remotely sensed data and field observations employed in this study were obtained from Watershed Allied Telemetry Experimental Research (WATER). A biophysics-based surface resistance model was revised to account for water stress and temperature constraints. The precision of the results was validated using 'ground truth' data obtained by eddy covariance (EC) system. Scale effects play an important role, especially for parameter optimisation and validation of the latent heat flux (λE). After considering the footprint of EC, the λE derived from the remote sensing data was comparable to the EC measured value during the satellite's passage. The results showed that the revised surface resistance parameterisation scheme was useful for estimating the latent heat flux over cropland in arid regions.
Borland, Ron; Balmford, James; Hitchman, Sara C.; Cummings, K. Michael; Driezen, Pete; Thompson, Mary E.
2017-01-01
Introduction: The rapid rise in electronic cigarettes (ECs) globally has stimulated much debate about the relative risk and public health impact of this new emerging product category as compared to conventional cigarettes. The sale and marketing of ECs containing nicotine are banned in many countries (eg, Australia) but are allowed in others (eg, United Kingdom). This study examined prevalence and correlates of the belief that ECs are a lot less harmful than conventional cigarettes under the different regulatory environments in Australia (ie, more restrictive) and the United Kingdom (ie, less restrictive). Methods: Australian and UK data from the 2013 survey of the International Tobacco Control Four-Country project were analyzed. Results: More UK than Australian respondents (58.5% vs. 35.2%) believed that ECs are a lot less harmful than conventional cigarettes but more respondents in Australia than in the United Kingdom selected “Don’t Know” (36.5% vs. 17.1%). The proportion that responded “A little less, equally or more harmful” did not differ between countries. Correlates of the belief that ECs are “A lot less harmful” differed between countries, while correlates of “Don’t Know” response did not differ. Conclusions: Consistent with the less restrictive regulatory environment affecting the sale and marketing of ECs, smokers and recent ex-smokers in the United Kingdom were more likely to believe ECs were less harmful relative to conventional cigarettes compared to those in Australia. Implications: What this study adds: Among smokers and ex-smokers, this study found that the belief that ECs are (a lot) less harmful than conventional cigarettes was considerably higher in the United Kingdom than in Australia in 2013. The finding is consistent with the less restrictive regulatory environment for ECs in the United Kingdom, suggesting that the regulatory framework for ECs adopted by a country can affect smokers’ perceptions about the relative harmfulness of ECs, the group that stands to gain the most from having an accurate belief about the relative harms of ECs. PMID:27190403
Yong, Hua-Hie; Borland, Ron; Balmford, James; Hitchman, Sara C; Cummings, K Michael; Driezen, Pete; Thompson, Mary E
2017-02-01
The rapid rise in electronic cigarettes (ECs) globally has stimulated much debate about the relative risk and public health impact of this new emerging product category as compared to conventional cigarettes. The sale and marketing of ECs containing nicotine are banned in many countries (eg, Australia) but are allowed in others (eg, United Kingdom). This study examined prevalence and correlates of the belief that ECs are a lot less harmful than conventional cigarettes under the different regulatory environments in Australia (ie, more restrictive) and the United Kingdom (ie, less restrictive). Australian and UK data from the 2013 survey of the International Tobacco Control Four-Country project were analyzed. More UK than Australian respondents (58.5% vs. 35.2%) believed that ECs are a lot less harmful than conventional cigarettes but more respondents in Australia than in the United Kingdom selected "Don't Know" (36.5% vs. 17.1%). The proportion that responded "A little less, equally or more harmful" did not differ between countries. Correlates of the belief that ECs are "A lot less harmful" differed between countries, while correlates of "Don't Know" response did not differ. Consistent with the less restrictive regulatory environment affecting the sale and marketing of ECs, smokers and recent ex-smokers in the United Kingdom were more likely to believe ECs were less harmful relative to conventional cigarettes compared to those in Australia. What this study adds: Among smokers and ex-smokers, this study found that the belief that ECs are (a lot) less harmful than conventional cigarettes was considerably higher in the United Kingdom than in Australia in 2013. The finding is consistent with the less restrictive regulatory environment for ECs in the United Kingdom, suggesting that the regulatory framework for ECs adopted by a country can affect smokers' perceptions about the relative harmfulness of ECs, the group that stands to gain the most from having an accurate belief about the relative harms of ECs. © The Author 2016. Published by Oxford University Press on behalf of the Society for Research on Nicotine and Tobacco.
Role of eddy pumping in enhancing primary production in the ocean
NASA Technical Reports Server (NTRS)
Falkowski, Paul G.; Kolber, Zbigniew; Ziemann, David; Bienfang, Paul K.
1991-01-01
Eddy pumping is considered to explain the disparity between geochemical estimates and biological measurements of exported production. Episodic nutrient injections from the ocean into the photic zone can be generated by eddy pumping, which biological measurements cannot sample accurately. The enhancement of production is studied with respect to a cyclonic eddy in the subtropical Pacific. A pump-and-probe fluorimeter generates continuous vertical profiles of primary productivity from which the contributions of photochemical and nonphotochemical processes to fluorescence are derived. A significant correlation is observed between the fluorescence measurements and radiocarbon measurements. The results indicate that eddy pumping has an important effect on phytoplankton production and that this production is near the maximum relative specific growth rates. Based on the production enhancement observed in this case, eddy pumping increases total primary production by only 20 percent and does not account for all enhancement.
NASA Technical Reports Server (NTRS)
Winckelmans, G. S.; Lund, T. S.; Carati, D.; Wray, A. A.
1996-01-01
Subgrid-scale models for Large Eddy Simulation (LES) in both the velocity-pressure and the vorticity-velocity formulations were evaluated and compared in a priori tests using spectral Direct Numerical Simulation (DNS) databases of isotropic turbulence: 128(exp 3) DNS of forced turbulence (Re(sub(lambda))=95.8) filtered, using the sharp cutoff filter, to both 32(exp 3) and 16(exp 3) synthetic LES fields; 512(exp 3) DNS of decaying turbulence (Re(sub(Lambda))=63.5) filtered to both 64(exp 3) and 32(exp 3) LES fields. Gaussian and top-hat filters were also used with the 128(exp 3) database. Different LES models were evaluated for each formulation: eddy-viscosity models, hyper eddy-viscosity models, mixed models, and scale-similarity models. Correlations between exact versus modeled subgrid-scale quantities were measured at three levels: tensor (traceless), vector (solenoidal 'force'), and scalar (dissipation) levels, and for both cases of uniform and variable coefficient(s). Different choices for the 1/T scaling appearing in the eddy-viscosity were also evaluated. It was found that the models for the vorticity-velocity formulation produce higher correlations with the filtered DNS data than their counterpart in the velocity-pressure formulation. It was also found that the hyper eddy-viscosity model performs better than the eddy viscosity model, in both formulations.
Ambrosio, Leire; Portillo, Mari Carmen; Rodríguez-Blázquez, Carmen; Rodriguez-Violante, Mayela; Castrillo, Juan Carlos Martínez; Arillo, Víctor Campos; Garretto, Nélida Susana; Arakaki, Tomoko; Dueñas, Marcos Serrano; Álvarez, Mario; Ibáñez, Ivonne Pedroso; Carvajal, Ana; Martínez-Martín, Pablo
2016-01-01
Understanding how a person lives with a chronic illness, such as Parkinson’s disease (PD), is necessary to provide individualized care and professionals role in person-centered care at clinical and community levels is paramount. The present study was aimed to analyze the psychometric properties of the Living with Chronic Illness-PD Scale (EC-PC) in a wide Spanish-speaking population with PD. International cross-sectional study with retest was carried out with 324 patients from four Latin American countries and Spain. Feasibility, acceptability, scaling assumptions, reliability, precision, and construct validity were tested. The study included 324 patients, with age (mean±s.d.) 66.67±10.68 years. None of the EC-PC items had missing values and all acceptability parameters fulfilled the standard criteria. Around two-third of the items (61.54%) met scaling assumptions standards. Concerning internal consistency, Cronbach’s alpha values were 0.68–0.88; item-total correlation was >0.30, except for two items; item homogeneity index was >0.30, and inter-item correlation values 0.14–0.76. Intraclass correlation coefficient for EC-PC stability was 0.76 and standard error of measurement (s.e.m.) for precision was 8.60 (for a EC-PC s.d.=18.57). EC-PC presented strong correlation with social support (rS=0.61) and moderate correlation with life satisfaction (rS=0.46). Weak and negligible correlations were found with the other scales. Internal validity correlations ranged from 0.46 to 0.78. EC-PC total scores were significantly different for each severity level based on Hoehn and Yahr and Clinical Impression of Severity Index, but not for Patient Global Impression of Severity. The EC-PC has satisfactory acceptability, reliability, precision, and validity to evaluate living with PD. PMID:28725703
Comparison of methods for quantifying surface sublimation over seasonally snow-covered terrain
Sexstone, Graham A.; Clow, David W.; Stannard, David I.; Fassnacht, Steven R.
2016-01-01
Snow sublimation can be an important component of the snow-cover mass balance, and there is considerable interest in quantifying the role of this process within the water and energy balance of snow-covered regions. In recent years, robust eddy covariance (EC) instrumentation has been used to quantify snow sublimation over snow-covered surfaces in complex mountainous terrain. However, EC can be challenging for monitoring turbulent fluxes in snow-covered environments because of intensive data, power, and fetch requirements, and alternative methods of estimating snow sublimation are often relied upon. To evaluate the relative merits of methods for quantifying surface sublimation, fluxes calculated by the EC, Bowen ratio–energy balance (BR), bulk aerodynamic flux (BF), and aerodynamic profile (AP) methods and their associated uncertainty were compared at two forested openings in the Colorado Rocky Mountains. Biases between methods are evaluated over a range of environmental conditions, and limitations of each method are discussed. Mean surface sublimation rates from both sites ranged from 0.33 to 0.36 mm day−1, 0.14 to 0.37 mm day−1, 0.10 to 0.17 mm day−1, and 0.03 to 0.10 mm day−1 for the EC, BR, BF and AP methods, respectively. The EC and/or BF methods are concluded to be superior for estimating surface sublimation in snow-covered forested openings. The surface sublimation rates quantified in this study are generally smaller in magnitude compared with previously published studies in this region and help to refine sublimation estimates for forested openings in the Colorado Rocky Mountains.
NASA Astrophysics Data System (ADS)
Blonquist, J. M.; Wingate, L.; Ogeé, J.; Bowling, D. R.
2011-12-01
The stable carbon isotope composition of atmospheric CO2 (δ13Ca) can provide useful information on water use efficiency (WUE) dynamics of terrestrial ecosystems and potentially constrain models of CO2 and water fluxes at the land surface. This is due to the leaf-level relationship between photosynthetic 13CO2 discrimination (Δ), which influences δ13Ca, and the ratio of leaf intercellular to atmospheric CO2 mole fractions (Ci / Ca), which is related to WUE and is determined by the balance between C assimilation (CO2 demand) and stomatal conductance (CO2 supply). We used branch-scale Δ derived from tunable diode laser absorption spectroscopy measurements collected in a Maritime pine forest to estimate Ci / Ca variations over an entire growing season. We combined Ci / Ca estimates with rates of gross primary production (GPP) derived from eddy covariance (EC) to estimate canopy-scale stomatal conductance (Gs) and transpiration (T). Estimates of T were highly correlated to T estimates derived from sapflow data (y = 1.22x + 0.08; r2 = 0.61; slope P < 0.001) and T predictions from an ecosystem model (MuSICA) (y = 0.88x - 0.05; r2 = 0.64; slope P < 0.001). As an alternative to estimating T, Δ measurements can be used to estimate GPP by combining Ci / Ca estimates with Gs estimates from sapflow data. Estimates of GPP were determined in this fashion and were highly correlated to GPP values derived from EC (y = 0.82 + 0.07; r2 = 0.61; slope P < 0.001) and GPP predictions from MuSICA (y = 1.10 + 0.42; r2 = 0.50; slope P < 0.001). Results demonstrate that the leaf-level relationship between Δ and Ci / Ca can be extended to the canopy-scale and that Δ measurements have utility for partitioning ecosystem-scale CO2 and water fluxes.
CO2 emissions driven by wind are produced at global scale
NASA Astrophysics Data System (ADS)
Rosario Moya, M.; Sánchez-Cañete, Enrique P.; Kowalski, Andrew S.; Serrano-Ortiz, Penélope; López-Ballesteros, Ana; Oyonarte, Cecilio; Domingo, Francisco
2017-04-01
As an important tool for understanding and monitoring ecosystem dynamics at ecosystem level, the eddy covariance (EC) technique allows the assessment of the diurnal and seasonal variation of the net ecosystem exchange (NEE). Despite the high temporal resolution data, there are still many processes (in addition to photosynthesis and respiration) that, although they are being monitored, have been neglected. Only a few authors have studied anomalous CO2 emissions (non biological), and have related them to soil ventilation, photodegradation or geochemical processes. The aims of this study are: 1) to identify anomalous daytime CO2 emissions in different ecosystems distributed around the world, 2) to determine the meteorological variables that influence these emissions, and 3) to explore the potential processes which can be involved. We have studied EC data together with other meteorological ancillary variables obtained from the FLUXNET database and have found more than 50 sites with anomalous CO2 emissions in different ecosystem types such as grasslands, croplands or savannas. Data were filtered according to the FLUXNET quality control flags (only data with maximum quality were used, i.e. control flag equal to 0) and daytime (shortwave radiation incoming > 50 W m-2). Partial Spearman correlation analyses were performed between NEE and ancillary data: air temperature, vapour pressure deficit, soil temperature, precipitation, atmospheric pressure, soil water content, incoming photosynthetic photon flux density, friction velocity and net radiation. When necessary, ancillary variables were gap-filled using the MDS method (Reichstein et al. 2005). Preliminary results showed strong and highly significant correlations between friction velocity and anomalous CO2 emissions, suggesting that these emissions were mainly produced by ventilation events. Anomalous CO2 emissions were found mainly in arid ecosystems and sites with hot and dry summers. We suggest that anomalous CO2 emissions occur globally and therefore, their contribution to the global NEE requires further investigation in order to better understand its drivers.
Evaluation of Surface Flux Parameterizations with Long-Term ARM Observations
Liu, Gang; Liu, Yangang; Endo, Satoshi
2013-02-01
Surface momentum, sensible heat, and latent heat fluxes are critical for atmospheric processes such as clouds and precipitation, and are parameterized in a variety of models ranging from cloud-resolving models to large-scale weather and climate models. However, direct evaluation of the parameterization schemes for these surface fluxes is rare due to limited observations. This study takes advantage of the long-term observations of surface fluxes collected at the Southern Great Plains site by the Department of Energy Atmospheric Radiation Measurement program to evaluate the six surface flux parameterization schemes commonly used in the Weather Research and Forecasting (WRF) model and threemore » U.S. general circulation models (GCMs). The unprecedented 7-yr-long measurements by the eddy correlation (EC) and energy balance Bowen ratio (EBBR) methods permit statistical evaluation of all six parameterizations under a variety of stability conditions, diurnal cycles, and seasonal variations. The statistical analyses show that the momentum flux parameterization agrees best with the EC observations, followed by latent heat flux, sensible heat flux, and evaporation ratio/Bowen ratio. The overall performance of the parameterizations depends on atmospheric stability, being best under neutral stratification and deteriorating toward both more stable and more unstable conditions. Further diagnostic analysis reveals that in addition to the parameterization schemes themselves, the discrepancies between observed and parameterized sensible and latent heat fluxes may stem from inadequate use of input variables such as surface temperature, moisture availability, and roughness length. The results demonstrate the need for improving the land surface models and measurements of surface properties, which would permit the evaluation of full land surface models.« less
Effect of wakes on land-atmosphere fluxes
NASA Astrophysics Data System (ADS)
Markfort, C. D.; Zhang, W.; Porte-Agel, F.; Stefan, H. G.
2011-12-01
Wakes affect land-atmosphere fluxes of momentum and scalars, including water vapor and trace gases. Canopies and bluff bodies, including forests, buildings and topography, cause boundary layer flow separation, significantly extend flow recovery, and lead to a break down of standard Monin-Obukhov similarity relationships in the atmospheric boundary layer (ABL). Wakes generated by these land surface features persist for significant distances affecting a large fraction of the Earth's terrestrial surface. This effect is currently not accounted for in land-atmosphere modeling, and little is known about how heterogeneity of wake-generating features effect land surface fluxes. Additionally flux measurements, made in wake-affected regions, do not satisfy the homogeneous requirements for the standard eddy correlation (EC) method. This phenomenon often referred to as sheltering has been shown to affect momentum and kinetic energy fluxes into lakes from the atmosphere (Markfort et al. 2010). This presentation will highlight results from controlled wind tunnel experiments of neutral and thermally stratified boundary layers, using PIV and custom x-wire/cold-wire anemometry, designed to understand how the physical structure of upstream bluff bodies or porous canopies and thermal stability affect the separation zone, boundary layer recovery and surface fluxes. We also compare these results to field measurements taken with a Doppler LiDAR in the wake of a canopy and a building. We have found that there is a nonlinear relationship between porosity and flow separation behind a canopy to clearing transition. Results will provide the basis for new parameterizations to account for wake effects on land-atmosphere fluxes and corrections for EC measurements over open fields, lakes, and wetlands.
Surface Renewal: Micrometeorological Measurements Avoiding the Sonic Anemometer
NASA Astrophysics Data System (ADS)
Suvocarev, K.; Reba, M. L.; Runkle, B.
2016-12-01
Surface renewal (SR) is micrometeorological technique that has been suggested as an inexpensive alternative to eddy covariance (EC). While it was originally dependent on a calibration coefficient (α), a recent approach by Castellví (2004) showed that SR can be used as a stand-alone method where α is estimated using similarity theory. This "self-calibration" method is suitable for measuring different scalar fluxes under all stability conditions (Castellví et. al, 2008). According to the same authors, SR does not demand a sonic anemometer as only the horizontal wind speed is necessary to arrive to α values. Therefore, it is more affordable and applicable in both roughness and inertial sub-layers which makes this method less stringent to fetch requirements (Castellví, 2012). The SR method has not yet been tested when the equipment is reduced to scalar measurements and a simple anemometer (RM Young 5103 Wind Monitor Sensor). Here, our objective was to test this approach over temperature, H2O, CO2 and CH4 time series. When EC is taken as a reference for a comparison, our initial results show that all fluxes measured by SR are higher than corresponding reference fluxes. The portion of overestimation is in the range of typical values reported by SR literature. Still, more research will be done to improve its understanding as the correlation between flux measurements is very high. The SR method seems to be promising in avoiding the use of sonic anemometry (and related errors) while maintaining fewer fetch requirements and the possibility to yield observations from all wind directions.
A technique for estimating dry deposition velocities based on similarity with latent heat flux
NASA Astrophysics Data System (ADS)
Pleim, Jonathan E.; Finkelstein, Peter L.; Clarke, John F.; Ellestad, Thomas G.
Field measurements of chemical dry deposition are needed to assess impacts and trends of airborne contaminants on the exposure of crops and unmanaged ecosystems as well as for the development and evaluation of air quality models. However, accurate measurements of dry deposition velocities require expensive eddy correlation measurements and can only be practically made for a few chemical species such as O 3 and CO 2. On the other hand, operational dry deposition measurements such as those used in large area networks involve relatively inexpensive standard meteorological and chemical measurements but rely on less accurate deposition velocity models. This paper describes an intermediate technique which can give accurate estimates of dry deposition velocity for chemical species which are dominated by stomatal uptake such as O 3 and SO 2. This method can give results that are nearly the quality of eddy correlation measurements of trace gas fluxes at much lower cost. The concept is that bulk stomatal conductance can be accurately estimated from measurements of latent heat flux combined with standard meteorological measurements of humidity, temperature, and wind speed. The technique is tested using data from a field experiment where high quality eddy correlation measurements were made over soybeans. Over a four month period, which covered the entire growth cycle, this technique showed very good agreement with eddy correlation measurements for O 3 deposition velocity.
The effect of agricultural structures on the quality of eddy covariance flux data
NASA Astrophysics Data System (ADS)
Tanny, Josef; Achiman, Ori; Mekhmandarov, Yonatan; Pirkner, Moran
2015-04-01
The Eddy Covariance (EC) is a common method to directly measure whole canopy turbulent fluxes of scalars like water vapor, air temperature and CO2. The method was originally developed to measure fluxes from canopies in the open; however, in recent years it was also shown to be valid for flux measurements of agricultural crops cultivated inside structures covered by porous screens, i.e., screenhouses. To reliably measure turbulent fluxes by the EC technique, several air flow conditions should prevail. The purpose of this study was to examine two criteria, commonly used to assess the suitability of turbulent flow conditions for EC measurements in open fields, for flux measurements in different types of agricultural screenhouses and greenhouses. The two tests are the "Integral Turbulence Characteristics" (ITC), which indicates on the development of the turbulent flow, and the "Steady State" (SS), which examines the variation in time of flow statistics during the averaging period. For both tests data was classified according to their suitability for flux measurements. The research was conducted in 3 types of agricultural structures with 3 different plants: (S1) A banana screenhouse, 5.5 m in height, covered by an 8% shade net; (S2) A pepper screenhouse, 3.7 m in height, covered by an insect-proof, 50 mesh net; (S3) A 12-span naturally ventilated tomato greenhouse with a 6 m height arched gable, equipped with an insect-proof 50 mesh net on the sidewalls, and impermeable plastic cover on the roof. In each structure an EC system was installed between the top of the canopy and the roof, in a position that provided sufficient fetch for the prevailing wind, for a measurement period of at least 20 days. Mean fluxes were calculated over half-hourly time intervals. In the present study the ITC test was applied in two different approaches: (i) according to the commonly used literature model which prevails for turbulent flow in open fields (ITC1), and (ii) according to a new model that was developed specifically for each structure by regressions of the actually measured data (ITC2). Results show that according to the ITC1 test, in S1, 80% of all the half-hourly time periods were suitable for EC flux measurements, whereas in S2 and S3 only 63% and 64% were suitable, respectively. On the other hand, using the ITC2 test the percentages of the suitable half-hourly time periods in S1, S2 and S3 increased to 91%, 83%, 82%, respectively. Analysis of the SS test showed that in S1, 88% of all the time periods were suitable for EC flux measurements. On the other hand in S2 and S3 only 77% and 79% were suitable, respectively. We conclude that the quality of flux data measured by the EC technique was high in the banana shading screenhouse, whereas in the pepper insect-proof screenhouse and the tomato greenhouse the quality was lower.
Measuring Evapotranspiration in Urban Irrigated Lawns in Two Kansas Cities
NASA Astrophysics Data System (ADS)
Shonkwiler, K. B.; Bremer, D.; Ham, J. M.
2011-12-01
Conservation of water is becoming increasingly critical in many metropolitan areas. The use of automated irrigation systems for the maintenance of lawns and landscapes is rising and these systems are typically maladjusted to apply more water than necessary, resulting in water wastage. Provision of accurate estimates of actual lawn water use may assist urbanites in conserving water through better adjustment of automatic irrigation systems. Micrometeorological methods may help determine actual lawn water use by measuring evapotranspiration (ET) from urban lawns. From April - August of 2011, four small tripod-mounted weather stations (tripods, five total) were deployed in twelve residential landscapes in the Kansas cities of Manhattan (MHK) and Wichita (ICT) in the USA (six properties in each city). Each tripod was instrumented to estimate reference crop evapotranspiration (ETo) via the FAO-56 method. During tripod deployment in residential lawns, actual evapotranspiration (ETactual) was measured nearby using a stationary, trailer-mounted eddy covariance (EC) station. The EC station sampled well-watered turf at the K-State Rocky Ford Turfgrass Center within 5 km of the study properties in MHK, and was also deployed at a commercial sod farm 15 - 40 km from the study residences in the greater ICT metro area. The fifth tripod was deployed in the source area of the EC station to estimate ETo in conjunction with tripods in the lawns (i.e., to serve as a reference). Data from EC allowed for computation of a so-called lawn coefficient (Kc) by determining the ratio of ETo from the tripods in residential lawns to ETo from the EC station (ETo,EC); hence, Kc = ETo,tripod / ETo,EC. Using this method, ETactual can be estimated for individual tripods within a lawn. Data suggests that it may be more accurate to quantify ET within individual lawns by microclimate (i.e., determine coefficients for "shaded" and "open/unshaded" portions of a lawn). By finding microclimate coefficients, estimates of ETactual for individual lawns can be tailored to the specific characteristics of each property.
NASA Astrophysics Data System (ADS)
Perry, Alexander R.
2002-06-01
Low Frequency Eddy Current (EC) probes are capable of measurement from 5 MHz down to DC through the use of Magnetoresistive (MR) sensors. Choosing components with appropriate electrical specifications allows them to be matched to the power and impedance characteristics of standard computer connectors. This permits direct attachment of the probe to inexpensive computers, thereby eliminating external power supplies, amplifiers and modulators that have heretofore precluded very low system purchase prices. Such price reduction is key to increased market penetration in General Aviation maintenance and consequent reduction in recurring costs. This paper examines our computer software CANDETECT, which implements this approach and permits effective probe operation. Results are presented to show the intrinsic sensitivity of the software and demonstrate its practical performance when seeking cracks in the underside of a thick aluminum multilayer structure. The majority of the General Aviation light aircraft fleet uses rivets and screws to attach sheet aluminum skin to the airframe, resulting in similar multilayer lap joints.
NASA Astrophysics Data System (ADS)
Liu, Tonghua; Wang, Wei; Qiang, Wenjiang; Shu, Guogang
2018-04-01
To study the thermal aging embrittlement of Z3CN20.09M duplex stainless steel produced in China, accelerated thermal aging experiments were carried out at 380 °C up to 9000 h. Microhardness measurements, Charpy impact and eddy current tests were performed on aged samples to characterize their thermal aging embrittlement. The results showed that the signal amplitude of eddy current decreased with the increase in aging time. Two quantitative correlations of the eddy current signal amplitude with both the Charpy impact energy, and the Vickers microhardness of the ferrite phase are obtained. The study showed that eddy current testing could be used to non-destructively evaluate the thermal aging embrittlement of cast duplex stainless steels.
Casimir Interaction from Magnetically Coupled Eddy Currents
DOE Office of Scientific and Technical Information (OSTI.GOV)
Intravaia, Francesco; Henkel, Carsten
2009-09-25
We study the quantum and thermal fluctuations of eddy (Foucault) currents in thick metallic plates. A Casimir interaction between two plates arises from the coupling via quasistatic magnetic fields. As a function of distance, the relevant eddy current modes cross over from a quantum to a thermal regime. These modes alone reproduce previously discussed thermal anomalies of the electromagnetic Casimir interaction between good conductors. In particular, they provide a physical picture for the Casimir entropy whose nonzero value at zero temperature arises from a correlated, glassy state.
Characteristics and sources of the fine carbonaceous aerosols in Haikou, China
NASA Astrophysics Data System (ADS)
Liu, Baoshuang; Zhang, Jiaying; Wang, Lu; Liang, Danni; Cheng, Yuan; Wu, Jianhui; Bi, Xiaohui; Feng, Yinchang; Zhang, Yufen; Yang, Haihang
2018-01-01
Ambient PM2.5 samples were collected from January to September 2015 in Haikou. The carbonaceous fractions included OC, EC, OC1, OC2, OC3, OC4, EC1, EC2, EC3, Char-EC (EC1 minus POC) and Soot-EC (EC2 plus EC3) were analysed in this study. The results indicate that the mean concentrations of OC and EC are 5.6 and 2.5 μg/m3 during the sampling period, respectively; and the concentrations of most of carbonaceous fractions are the highest in winter and the lowest in spring. The seasonal variations of Soot-EC and Char-EC concentrations show distinct differences. The concentrations of Char-EC are higher in winter and lower in spring; while those of Soot-EC are lower in winter and higher in summer. Compared to Char-EC, the concentrations of Soot-EC show smaller seasonal-variation in Haikou. The Char-EC has the higher correlations with OC and EC (r = 0.91 and 0.95, P < 0.01), while the correlation between the Soot-EC and either OC or EC is absent (r = 0.15 and 0.11, P > 0.05). The average ratios of Char-EC/Soot-EC are in the order of winter (15.9) > autumn (4.9) > summer (4.0) > spring (3.6), with an average value of 7.1. According to error estimation (EE) diagnostics analysis, four factors are revealed in Positive Matrix Factorization (PMF) analysis during each season. The combined gasoline/diesel vehicle exhaust, coal combustion, biomass burning and specific diesel vehicle exhaust are identified as the major sources of carbonaceous aerosols, and their contributions during the whole year are up to 29.3%, 27.4%, 17.9% and 15.9%, respectively. The transport trajectories of the air masses illustrate distinct differences during different seasons, and the transport trajectories are mainly derived from the mainland China (i.e. Jiangxi, Fujian and Guangdong provinces) in winter, likely caused by higher contribution of coal combustion.
Wang, Shusen; Pan, Ming; Mu, Qiaozhen; ...
2015-07-29
Here, this study compares six evapotranspiration ET products for Canada's landmass, namely, eddy covariance EC measurements; surface water budget ET; remote sensing ET from MODIS; and land surface model (LSM) ET from the Community Land Model (CLM), the Ecological Assimilation of Land and Climate Observations (EALCO) model, and the Variable Infiltration Capacity model (VIC). The ET climatology over the Canadian landmass is characterized and the advantages and limitations of the datasets are discussed. The EC measurements have limited spatial coverage, making it difficult for model validations at the national scale. Water budget ET has the largest uncertainty because of datamore » quality issues with precipitation in mountainous regions and in the north. MODIS ET shows relatively large uncertainty in cold seasons and sparsely vegetated regions. The LSM products cover the entire landmass and exhibit small differences in ET among them. Annual ET from the LSMs ranges from small negative values to over 600 mm across the landmass, with a countrywide average of 256 ± 15 mm. Seasonally, the countrywide average monthly ET varies from a low of about 3 mm in four winter months (November-February) to 67 ± 7 mm in July. The ET uncertainty is scale dependent. Larger regions tend to have smaller uncertainties because of the offset of positive and negative biases within the region. More observation networks and better quality controls are critical to improving ET estimates. Future techniques should also consider a hybrid approach that integrates strengths of the various ET products to help reduce uncertainties in ET estimation.« less
Eddy covariance VOC emission and deposition fluxes above grassland using PTR-TOF
NASA Astrophysics Data System (ADS)
Ruuskanen, T. M.; Müller, M.; Schnitzhofer, R.; Karl, T.; Graus, M.; Bamberger, I.; Hörtnagl, L.; Brilli, F.; Wohlfahrt, G.; Hansel, A.
2011-01-01
Eddy covariance (EC) is the preferable technique for flux measurements since it is the only direct flux determination method. It requires a continuum of high time resolution measurements (e.g. 5-20 Hz). For volatile organic compounds (VOC) soft ionization via proton transfer reaction has proven to be a quantitative method for real time mass spectrometry; here we use a proton transfer reaction time of flight mass spectrometer (PTR-TOF) for 10 Hz EC measurements of full mass spectra up to m/z 315. The mass resolution of the PTR-TOF enabled the identification of chemical formulas and separation of oxygenated and hydrocarbon species exhibiting the same nominal mass. We determined 481 ion mass peaks from ambient air concentration above a managed, temperate mountain grassland in Neustift, Stubai Valley, Austria. During harvesting we found significant fluxes of 18 compounds distributed over 43 ions, including protonated parent compounds, as well as their isotopes and fragments and VOC-H+ - water clusters. The dominant BVOC fluxes were methanol, acetaldehyde, ethanol, hexenal and other C6 leaf wound compounds, acetone, acetic acid, monoterpenes and sequiterpenes. The smallest reliable fluxes we determined were less than 0.1 nmol m-2 s-1, as in the case of sesquiterpene emissions from freshly cut grass. Terpenoids, including mono- and sesquiterpenes, were also deposited to the grassland before and after the harvesting. During cutting, total VOC emission fluxes up to 200 nmolC m-2 s-1 were measured. Methanol emissions accounted for half of the emissions of oxygenated VOCs and a third of the carbon of all measured VOC emissions during harvesting.
VOC Emission and Deposition Eddy Covariance Fluxes above Grassland using PTR-TOF
NASA Astrophysics Data System (ADS)
Ruuskanen, T. M.; Müller, M.; Schnitzhofer, R.; Karl, T.; Graus, M.; Bamberger, I.; Hörtnagl, L.; Brilli, F.; Wohlfahrt, G.; Hansel, A.
2010-12-01
Eddy covariance (EC) is the preferable technique for flux measurements since it is the only direct flux determination method. It requires a continuum of high time resolution measurements (e.g. 5-20 Hz). For volatile organic compounds (VOC) soft ionization via proton transfer reaction has proven to be a quantitative method for real time mass spectrometry; here we use a proton transfer reaction time of flight mass spectrometer (PTR-TOF) for 10 Hz EC measurements of full mass spectra up to m/z 315. The mass resolution of the PTR-TOF enabled the identification of chemical formulas and separation of oxygenated and hydrocarbon species exhibiting the same nominal mass. We determined 481 ion mass peaks from ambient air concentration above a managed, temperate mountain grassland in Neustift, Stubai Valley, Austria. During harvesting we found significant fluxes of 18 compounds distributed over 43 ions, including protonated parent compounds, as well as their isotopes and fragments and VOC-H+ - water clusters. The dominant BVOC fluxes were methanol, acetaldehyde, ethanol, hexenal and other C6 leaf wound compounds, acetone, acetic acid, monoterpenes and sequiterpenes. The smallest reliable fluxes we determined were less than 0.1 nmol m-2 s-1, as in the case of sesquiterpene emissions from freshly cut grass. Terpenoids, including mono- and sesquiterpenes, were also deposited to the grassland before and after the harvesting. During cutting, total VOC emission fluxes up to 200 nmolC m-2 s-1 were measured. Methanol emissions accounted for half of the emissions of oxygenated VOCs and a third of the carbon of all measured VOC emissions during harvesting.
Eddy covariance VOC emission and deposition fluxes above grassland using PTR-TOF
NASA Astrophysics Data System (ADS)
Ruuskanen, T. M.; Müller, M.; Schnitzhofer, R.; Karl, T.; Graus, M.; Bamberger, I.; Hörtnagl, L.; Brilli, F.; Wohlfahrt, G.; Hansel, A.
2010-09-01
Eddy covariance (EC) is the preferable technique for flux measurements since it is the only direct flux determination method. It requires a continuum of high time resolution measurements (e.g. 5-20 Hz). For volatile organic compounds (VOC) soft ionization via proton transfer reaction has proven to be a quantitative method for real time mass spectrometry; here we use a proton transfer reaction time of flight mass spectrometer (PTR-TOF) for 10 Hz EC measurements of full mass spectra up to m/z 315. The mass resolution of the PTR-TOF enabled the identification of chemical formulas and separation of oxygenated and hydrocarbon species exhibiting the same nominal mass. We determined 481 ion mass peaks from ambient air concentration above a managed, temperate mountain grassland in Neustift, Stubai Valley, Austria. During harvesting we found significant fluxes of 18 compounds distributed over 43 ions, including protonated parent compounds, as well as their isotopes and fragments and VOC-H+-water clusters. The dominant BVOC fluxes were methanol, acetaldehyde, ethanol, hexenal and other C6 leaf wound compounds, acetone, acetic acid, monoterpenes and sequiterpenes. The smallest reliable fluxes we determined were less than 0.1 nmol m-2 s-1, as in the case of sesquiterpene emissions from freshly cut grass. Terpenoids, including mono- and sesquiterpenes, were also deposited to the grassland before and after the harvesting. During cutting, total VOC emission fluxes up to 200 nmol C m-2 s-1 were measured. Methanol emissions accounted for half of the emissions of oxygenated VOCs and a third of the carbon of all measured VOC emissions during harvesting.
Modeling Energy and Mass Fluxes Over a Vineyard Using the Acasa Model
NASA Astrophysics Data System (ADS)
Marras, S.; Bellucco, V.; Pyles, D.; Falk, M.; Sirca, C.; Duce, P.; Snyder, R. L.; Paw U, K.; Spano, D.
2012-12-01
Energy and mass fluxes are widely monitored over natural ecosystems by the Eddy Covariance (EC) towers within the FLUXNET monitoring network. Only a few studies focused on EC measurements over tree crops and vines, and there is a lack of information useful to parameterize crop and flux models over such systems. The aim of this study was to improve our knowledge about the performance of the land surface model ACASA (Advanced Canopy-Atmosphere-Soil Algorithm) in estimating energy, water, and carbon fluxes over a typical Mediterranean vineyard located in Southern Sardinia (Italy). ACASA estimates turbulent fluxes per 20 canopy layers (10 layers within and 10 above the canopy) and 15 soil layers, using third-order closure equations. CO2 fluxes are estimated using a combination of Ball-Berry and Farquhar equations. The model parameters derived from literature, from a previous work conducted in Tuscany (Italy) and from direct measurements collected in the experimental site of this study. An Eddy Covariance measurement tower was installed to continuously monitor sensible and latent heat, and CO2 fluxes, in conjunction with a net radiometer, and soil heat flux plates from June 2009. A meteorological station was also set up for ancillary measurements. Model performance was evaluated by RMSE and linear regression statistics. Results for the energy balance components and CO2 exchanges will be presented. Detailed analysis was devoted to evaluate the model ability in estimating the vineyard evapotranspiration. This term of the energy balance is, in fact, important for farmers since they are mainly interested in quantify crop water requirements for a better irrigation management.
DOE Office of Scientific and Technical Information (OSTI.GOV)
Wang, Shusen; Pan, Ming; Mu, Qiaozhen
Here, this study compares six evapotranspiration ET products for Canada's landmass, namely, eddy covariance EC measurements; surface water budget ET; remote sensing ET from MODIS; and land surface model (LSM) ET from the Community Land Model (CLM), the Ecological Assimilation of Land and Climate Observations (EALCO) model, and the Variable Infiltration Capacity model (VIC). The ET climatology over the Canadian landmass is characterized and the advantages and limitations of the datasets are discussed. The EC measurements have limited spatial coverage, making it difficult for model validations at the national scale. Water budget ET has the largest uncertainty because of datamore » quality issues with precipitation in mountainous regions and in the north. MODIS ET shows relatively large uncertainty in cold seasons and sparsely vegetated regions. The LSM products cover the entire landmass and exhibit small differences in ET among them. Annual ET from the LSMs ranges from small negative values to over 600 mm across the landmass, with a countrywide average of 256 ± 15 mm. Seasonally, the countrywide average monthly ET varies from a low of about 3 mm in four winter months (November-February) to 67 ± 7 mm in July. The ET uncertainty is scale dependent. Larger regions tend to have smaller uncertainties because of the offset of positive and negative biases within the region. More observation networks and better quality controls are critical to improving ET estimates. Future techniques should also consider a hybrid approach that integrates strengths of the various ET products to help reduce uncertainties in ET estimation.« less
Verification of Agricultural Methane Emission Inventories
NASA Astrophysics Data System (ADS)
Desjardins, R. L.; Pattey, E.; Worth, D. E.; VanderZaag, A.; Mauder, M.; Srinivasan, R.; Worthy, D.; Sweeney, C.; Metzger, S.
2017-12-01
It is estimated that agriculture contributes more than 40% of anthropogenic methane (CH4) emissions in North America. However, these estimates, which are either based on the Intergovernmental Panel on Climate Change (IPCC) methodology or inverse modeling techniques, are poorly validated due to the challenges of separating interspersed CH4 sources within agroecosystems. A flux aircraft, instrumented with a fast-response Picarro CH4 analyzer for the eddy covariance (EC) technique and a sampling system for the relaxed eddy accumulation technique (REA), was flown at an altitude of about 150 m along several 20-km transects over an agricultural region in Eastern Canada. For all flight days, the top-down CH4 flux density measurements were compared to the footprint adjusted bottom-up estimates based on an IPCC Tier II methodology. Information on the animal population, land use type and atmospheric and surface variables were available for each transect. Top-down and bottom-up estimates of CH4 emissions were found to be poorly correlated, and wetlands were the most frequent confounding source of CH4; however, there were other sources such as waste treatment plants and biodigesters. Spatially resolved wavelet covariance estimates of CH4 emissions helped identify the contribution of wetlands to the overall CH4 flux, and the dependence of these emissions on temperature. When wetland contribution in the flux footprint was minimized, top-down and bottom-up estimates agreed to within measurement error. This research demonstrates that although existing aircraft-based technology can be used to verify regional ( 100 km2) agricultural CH4 emissions, it remains challenging due to diverse sources of CH4 present in many regions. The use of wavelet covariance to generate spatially-resolved flux estimates was found to be the best way to separate interspersed sources of CH4.
A New Approach to Extract Forest Water Use Efficiency from Eddy Covariance Data
NASA Astrophysics Data System (ADS)
Scanlon, T. M.; Sulman, B. N.
2016-12-01
Determination of forest water use efficiency (WUE) from eddy covariance data typically involves the following steps: (a) estimating gross primary productivity (GPP) from direct measurements of net ecosystem exchange (NEE) by extrapolating nighttime ecosystem respiration (ER) to daytime conditions, and (b) assuming direct evaporation (E) is minimal several days after rainfall, meaning that direct measurements of evapotranspiration (ET) are identical to transpiration (T). Both of these steps could lead to errors in the estimation of forest WUE. Here, we present a theoretical approach for estimating WUE through the analysis of standard eddy covariance data, which circumvents these steps. Only five statistics are needed from the high-frequency time series to extract WUE: CO2 flux, water vapor flux, standard deviation in CO2 concentration, standard deviation in water vapor concentration, and the correlation coefficient between CO2 and water vapor concentration for each half-hour period. The approach is based on the assumption that stomatal fluxes (i.e. photosynthesis and transpiration) lead to perfectly negative correlations and non-stomatal fluxes (i.e. ecosystem respiration and direct evaporation) lead to perfectly positive correlations within the CO2 and water vapor high frequency time series measured above forest canopies. A mathematical framework is presented, followed by a proof of concept using eddy covariance data and leaf-level measurements of WUE.
Gap-filling methods to impute eddy covariance flux data by preserving variance.
NASA Astrophysics Data System (ADS)
Kunwor, S.; Staudhammer, C. L.; Starr, G.; Loescher, H. W.
2015-12-01
To represent carbon dynamics, in terms of exchange of CO2 between the terrestrial ecosystem and the atmosphere, eddy covariance (EC) data has been collected using eddy flux towers from various sites across globe for more than two decades. However, measurements from EC data are missing for various reasons: precipitation, routine maintenance, or lack of vertical turbulence. In order to have estimates of net ecosystem exchange of carbon dioxide (NEE) with high precision and accuracy, robust gap-filling methods to impute missing data are required. While the methods used so far have provided robust estimates of the mean value of NEE, little attention has been paid to preserving the variance structures embodied by the flux data. Preserving the variance of these data will provide unbiased and precise estimates of NEE over time, which mimic natural fluctuations. We used a non-linear regression approach with moving windows of different lengths (15, 30, and 60-days) to estimate non-linear regression parameters for one year of flux data from a long-leaf pine site at the Joseph Jones Ecological Research Center. We used as our base the Michaelis-Menten and Van't Hoff functions. We assessed the potential physiological drivers of these parameters with linear models using micrometeorological predictors. We then used a parameter prediction approach to refine the non-linear gap-filling equations based on micrometeorological conditions. This provides us an opportunity to incorporate additional variables, such as vapor pressure deficit (VPD) and volumetric water content (VWC) into the equations. Our preliminary results indicate that improvements in gap-filling can be gained with a 30-day moving window with additional micrometeorological predictors (as indicated by lower root mean square error (RMSE) of the predicted values of NEE). Our next steps are to use these parameter predictions from moving windows to gap-fill the data with and without incorporation of potential driver variables of the parameters traditionally used. Then, comparisons of the predicted values from these methods and 'traditional' gap-filling methods (using 12 fixed monthly windows) will be assessed to show the scale of preserving variance. Further, this method will be applied to impute artificially created gaps for analyzing if variance is preserved.
Analysis and numerical modelling of eddy current damper for vibration problems
NASA Astrophysics Data System (ADS)
Irazu, L.; Elejabarrieta, M. J.
2018-07-01
This work discusses a contactless eddy current damper, which is used to attenuate structural vibration. Eddy currents can remove energy from dynamic systems without any contact and, thus, without adding mass or modifying the rigidity of the structure. An experimental modal analysis of a cantilever beam in the absence of and under a partial magnetic field is conducted in the bandwidth of 01 kHz. The results show that the eddy current phenomenon can attenuate the vibration of the entire structure without modifying the natural frequencies or the mode shapes of the structure itself. In this study, a new inverse method to numerically determine the dynamic properties of the contactless eddy current damper is proposed. The proposed inverse method and the eddy current model based on a lineal viscous force are validated by a practical application. The numerically obtained transfer function correlates with the experimental one, thus showing good agreement in the entire bandwidth of 01 kHz. The proposed method provides an easy and quick tool to model and predict the dynamic behaviour of the contactless eddy current damper, thereby avoiding the use of complex analytical models.
NASA Astrophysics Data System (ADS)
Florentin, Anat; Agam, Nurit
2015-04-01
The Negev desert is characterized by an arid climate (annual mean precipitation is 90 mm) with sea breeze carrying moisture from the Mediterranean Sea during the afternoon regularly. Non-rainfall water inputs (NRWIs) are thus of great importance to the hydrometeorology and the ecological functioning of the region. The small magnitude of NRWIs challenges attempts to quantify these processes. The aim of this research was to test commonly used micrometeorological methods to quantify the energy balance components during the deposition and evaporation of NRWIs. A fully equipped micrometeorological station was set up near the Blaustein Institutes for Desert Research of the Ben-Gurion University of the Negev (30o 51' 35.6" N; 34o 46' 24.8" E) during September-October 2014. Net-radiation was measured with a 4-way net radiometer, and soil heat flux was quantified by the calorimetric method in three replicates. Latent heat was measured using an eddy-covariance (EC) and compared to a micro-lysimeter (ML); sensible heat flux was measured with an EC and a surface layer scintillometer (SLS). Sensible heat fluxes measured by the EC and the SLS showed good agreement. EC latent heat fluxes were in good agreement with those derived by the ML. Nevertheless, derivation of latent heat flux from the SLS measurements through the energy balance equation showed a relatively large deviation from the directly measured latent heat flux. This deviation is likely attributed to measurement errors of the soil heat flux.
Holm, Guerry O.; Perez, Brian C.; McWhorter, David E.; Krauss, Ken W.; Johnson, Darren J.; Raynie, Richard C.; Killebrew, Charles J.
2016-01-01
Sulfate from seawater inhibits methane production in tidal wetlands, and by extension, salinity has been used as a general predictor of methane emissions. With the need to reduce methane flux uncertainties from tidal wetlands, eddy covariance (EC) techniques provide an integrated methane budget. The goals of this study were to: 1) establish methane emissions from natural, freshwater and brackish wetlands in Louisiana based on EC; and 2) determine if EC estimates conform to a methane-salinity relationship derived from temperate tidal wetlands with chamber sampling. Annual estimates of methane emissions from this study were 62.3 g CH4/m2/yr and 13.8 g CH4/m2/yr for the freshwater and brackish (8–10 psu) sites, respectively. If it is assumed that long-term, annual soil carbon sequestration rates of natural marshes are ~200 g C/m2/yr (7.3 tCO2e/ha/yr), healthy brackish marshes could be expected to act as a net radiative sink, equivalent to less than one-half the soil carbon accumulation rate after subtracting methane emissions (4.1 tCO2e/ha/yr). Carbon sequestration rates would need case-by-case assessment, but the EC methane emissions estimates in this study conformed well to an existing salinity-methane model that should serve as a basis for establishing emission factors for wetland carbon offset projects.
Mesoscale eddies and T richodesmium spp. distributions in the southwestern North Atlantic
McGillicuddy, Dennis J.; Flierl, Glenn R.; Davis, Cabell S.; Dyhrman, Sonya T.; Waterbury, John B.
2015-01-01
Abstract Correlations of Trichodesmium colony abundance with the eddy field emerged in two segments of Video Plankton Recorder observations made in the southwestern North Atlantic during fall 2010 and spring 2011. In fall 2010, local maxima in abundance were observed in cyclones. We hypothesized surface Ekman transport convergence as a mechanism for trapping buoyant colonies in cyclones. Idealized models supported the potential of this process to influence the distribution of buoyant colonies over time scales of several months. In spring 2011, the highest vertically integrated colony abundances were observed in anticyclones. These peaks in abundance correlated with anomalously fresh water, suggesting riverine input as a driver of the relationship. These contrasting results in cyclones and anticyclones highlight distinct mechanisms by which mesoscale eddies can influence the abundance and distribution of Trichodesmium populations of the southwestern North Atlantic. PMID:26937328
NASA Astrophysics Data System (ADS)
Madugundu, Rangaswamy; Al-Gaadi, Khalid A.; Tola, ElKamil; Hassaballa, Abdalhaleem A.; Patil, Virupakshagouda C.
2017-12-01
Accurate estimation of evapotranspiration (ET) is essential for hydrological modeling and efficient crop water management in hyper-arid climates. In this study, we applied the METRIC algorithm on Landsat-8 images, acquired from June to October 2013, for the mapping of ET of a 50 ha center-pivot irrigated alfalfa field in the eastern region of Saudi Arabia. The METRIC-estimated energy balance components and ET were evaluated against the data provided by an eddy covariance (EC) flux tower installed in the field. Results indicated that the METRIC algorithm provided accurate ET estimates over the study area, with RMSE values of 0.13 and 4.15 mm d-1. The METRIC algorithm was observed to perform better in full canopy conditions compared to partial canopy conditions. On average, the METRIC algorithm overestimated the hourly ET by 6.6 % in comparison to the EC measurements; however, the daily ET was underestimated by 4.2 %.
Balzarolo, Manuela; Anderson, Karen; Nichol, Caroline; Rossini, Micol; Vescovo, Loris; Arriga, Nicola; Wohlfahrt, Georg; Calvet, Jean-Christophe; Carrara, Arnaud; Cerasoli, Sofia; Cogliati, Sergio; Daumard, Fabrice; Eklundh, Lars; Elbers, Jan A.; Evrendilek, Fatih; Handcock, Rebecca N.; Kaduk, Joerg; Klumpp, Katja; Longdoz, Bernard; Matteucci, Giorgio; Meroni, Michele; Montagnani, Lenoardo; Ourcival, Jean-Marc; Sánchez-Cañete, Enrique P.; Pontailler, Jean-Yves; Juszczak, Radoslaw; Scholes, Bob; Martín, M. Pilar
2011-01-01
This paper reviews the currently available optical sensors, their limitations and opportunities for deployment at Eddy Covariance (EC) sites in Europe. This review is based on the results obtained from an online survey designed and disseminated by the Co-cooperation in Science and Technology (COST) Action ESO903—“Spectral Sampling Tools for Vegetation Biophysical Parameters and Flux Measurements in Europe” that provided a complete view on spectral sampling activities carried out within the different research teams in European countries. The results have highlighted that a wide variety of optical sensors are in use at flux sites across Europe, and responses further demonstrated that users were not always fully aware of the key issues underpinning repeatability and the reproducibility of their spectral measurements. The key findings of this survey point towards the need for greater awareness of the need for standardisation and development of a common protocol of optical sampling at the European EC sites. PMID:22164055
Interannual variability in ozone removal by a temperate deciduous forest
NASA Astrophysics Data System (ADS)
Clifton, O. E.; Fiore, A. M.; Munger, J. W.; Malyshev, S.; Horowitz, L. W.; Shevliakova, E.; Paulot, F.; Murray, L. T.; Griffin, K. L.
2017-01-01
The ozone (O3) dry depositional sink and its contribution to observed variability in tropospheric O3 are both poorly understood. Distinguishing O3 uptake through plant stomata versus other pathways is relevant for quantifying the O3 influence on carbon and water cycles. We use a decade of O3, carbon, and energy eddy covariance (EC) fluxes at Harvard Forest to investigate interannual variability (IAV) in O3 deposition velocities (vd,O3). In each month, monthly mean vd,O3 for the highest year is twice that for the lowest. Two independent stomatal conductance estimates, based on either water vapor EC or gross primary productivity, vary little from year to year relative to canopy conductance. We conclude that nonstomatal deposition controls the substantial observed IAV in summertime vd,O3 during the 1990s over this deciduous forest. The absence of obvious relationships between meteorology and vd,O3 implies a need for additional long-term, high-quality measurements and further investigation of nonstomatal mechanisms.
Estimations of evapotranspiration and water balance with uncertainty over the Yukon River Basin
Yuan, Wenping; Liu, Shuguang; Liang, Shunlin; Tan, Zhengxi; Liu, Heping; Young, Claudia
2012-01-01
In this study, the revised Remote Sensing-Penman Monteith model (RS-PM) was used to scale up evapotranspiration (ET) over the entire Yukon River Basin (YRB) from three eddy covariance (EC) towers covering major vegetation types. We determined model parameters and uncertainty using a Bayesian-based method in the three EC sites. The 95 % confidence interval for the aggregate ecosystem ET ranged from 233 to 396 mm yr−1 with an average of 319 mm yr−1. The mean difference between precipitation and evapotranspiration (W) was 171 mm yr−1 with a 95 % confidence interval of 94–257 mm yr−1. The YRB region showed a slight increasing trend in annual precipitation for the 1982–2009 time period, while ET showed a significant increasing trend of 6.6 mm decade−1. As a whole, annual W showed a drying trend over YRB region.
DOE Office of Scientific and Technical Information (OSTI.GOV)
Kumar, M.; French Atomic Energy and Alternative Energies Commission; Tordjeman, Ph.
2015-07-01
This study was carried out to understand the response of an eddy current type flowmeter in two phase liquid-metal flow. We use the technique of ellipse fit and correlate the fluctuations in the angle of inclination of this ellipse with the void fraction. The effects of physical parameters such as coil excitation frequency and flow velocity have been studied. The results show the possibility of using an eddy current flowmeter as a gas detector for large void fractions. (authors)
DOE Office of Scientific and Technical Information (OSTI.GOV)
Kumar, M.; CEA, DEN, Nuclear Technology Department, F-13108 Saint-Paul-lez-Durance; Tordjeman, Ph.
2015-07-01
This study was carried out to understand the response of an eddy current type flowmeter in two phase liquid-metal flow. We use the technique of ellipse fit and correlate the fluctuations in the angle of inclination of this ellipse with the void fraction. The effects of physical parameters such as coil excitation frequency and flow velocity have been studied. The results show the possibility of using an eddy current flowmeter as a gas detector for large void fractions. (authors)
NASA Astrophysics Data System (ADS)
Wu, S. H.; Jansson, P.-E.
2012-05-01
Recovery of photosynthesis and transpiration is strongly restricted by low temperatures in air and/or soil during the transition period from winter to spring in boreal zones. The extent to which air temperature (Ta) and soil temperature (Ts) influence the seasonality of photosynthesis and transpiration of a boreal spruce ecosystem was investigated using a process-based ecosystem model (CoupModel) together with eddy covariance (EC) data from one eddy flux tower and nearby soil measurements at Knottåsen, Sweden. A Monte Carlo based uncertainty method (GLUE) provided prior and posterior distributions of simulations representing a wide range of soil conditions and performance indicators. The simulated results showed sufficient flexibility to predict the measured cold and warm Ts in the moist and dry plots around the eddy flux tower. Moreover, the model presented a general ability to describe both biotic and abiotic processes for the Norway spruce stand. The dynamics of sensible heat fluxes were well described the corresponding latent heat fluxes and net ecosystem exchange of CO2. The parameter ranges obtained are probably valid to represent regional characteristics of boreal conifer forests, but were not easy to constrain to a smaller range than that produced by the assumed prior distributions. Finally, neglecting the soil temperature response function resulted in fewer behavioural models and probably more compensatory errors in other response functions for regulating the seasonality of ecosystem fluxes.
NASA Astrophysics Data System (ADS)
Buysse, Pauline; Loubet, Benjamin; Ciuraru, Raluca; Lafouge, Florence; Zurfluh, Olivier; Gonzaga-Gomez, Lais; Fanucci, Olivier; Gueudet, Jean-Christophe; Decuq, Céline; Gros, Valérie; Sarda, Roland; Zannoni, Nora
2017-04-01
The quantification of volatile organic compounds (VOC) fluxes exchanged by terrestrial ecosystems is of large interest because of their influence on the chemistry and composition of the atmosphere including aerosols and oxidants. Latest developments in the techniques for detecting, identifying and measuring VOC fluxes have considerably improved the abilities to get reliable estimates. Among these, the eddy-covariance (EC) methodology constitutes the most direct approach, and relies on both well-established principles (Aubinet et al. 2000) and a sound continuously worldwide improving experience. The combination of the EC methodology with the latest proton-transfer-reaction mass spectrometer (PTR-MS) device, the PTR-Qi-TOF-MS, which allows the identification and quantification of more than 500 VOC at high frequency, now provides a very powerful and precise tool for an accurate quantification of VOC fluxes on various types of terrestrial ecosystems. The complexity of the whole methodology however demands that several data quality requirements are fulfilled. VOC fluxes were measured by EC with a PTR-Qi-TOF-MS (national instrument within the ANAEE-France framework) for one month and a half over a mature wheat crop near Paris (FR-GRI ICOS site). Most important emissions (by descending order) were observed from detected compounds with mass-over-charge (m/z) ratios of 33.033 (methanol), 45.033 (acetaldehyde), 93.033 (not identified yet), 59.049 (acetone), and 63.026 (dimethyl sulfide or DMS). Emissions from higher-mass compounds, which might be due to pesticide applications at the beginning of our observation period, were also detected. Some compounds were also seen to deposit (e.g. m/z 47.013, 71.085, 75.044, 83.05) while others exhibited bidirectional fluxes (e.g. m/z 57.07, 69.07). Before analyzing VOC flux responses to meteorological and crop development drivers, a data quality check was performed which included (i) uncertainty analysis of mass and concentration calibration, (ii) determination of fragmentation patterns and (iii) of lag time high-frequency losses for all ions that showed a flux, and (iv) the determination of the flux random uncertainties and of the limit of detection.
Hydrodynamic effects on cell growth in agitated microcarrier bioreactors
NASA Technical Reports Server (NTRS)
Cherry, Robert S.; Papoutsakis, E. Terry
1988-01-01
The net growth rate of bovine embryonic kidney cells in microcarrier bioreactor is the result of a variable death rate imposed on a cell culture trying to grow at a constant intrinsic growth rate. The death rate is a function of the agitation conditions in the system, and increases at higher agitation because of increasingly energetic interactions of the cell covered microcarriers with turbulent eddies in the fluid. At very low agitation rates bead-bead bridging becomes important; the large clumps formed by bridging can interact with larger eddies than single beads, leading to a higher death rate at low agitation. The growth and death rate were correlated with a dimensionless eddy number which compares eddy forces to the buoyant force on the bead.
NASA Astrophysics Data System (ADS)
Soltani, Mohsen; Mauder, Matthias; Laux, Patrick; Kunstmann, Harald
2017-07-01
The temporal multiscale variability of the surface heat fluxes is assessed by the analysis of the turbulent heat and moisture fluxes using the eddy covariance (EC) technique at the TERrestrial ENvironmental Observatories (TERENO) prealpine region. The fast and slow response variables from three EC sites located at Fendt, Rottenbuch, and Graswang are gathered for the period of 2013 to 2014. Here, the main goals are to characterize the multiscale variations and drivers of the turbulent fluxes, as well as to quantify the energy balance closure (EBC) and analyze the possible reasons for the lack of EBC at the EC sites. To achieve these goals, we conducted a principal component analysis (PCA) and a climatological turbulent flux footprint analysis. The results show significant differences in the mean diurnal variations of the sensible heat (H) and latent heat (LE) fluxes, because of variations in the solar radiation, precipitation patterns, soil moisture, and the vegetation fraction throughout the year. LE was the main consumer of net radiation. Based on the first principal component (PC1), the radiation and temperature components with a total mean contribution of 29.5 and 41.3%, respectively, were found to be the main drivers of the turbulent fluxes at the study EC sites. A general lack of EBC is observed, where the energy imbalance values amount 35, 44, and 35% at the Fendt, Rottenbuch, and Graswang sites, respectively. An average energy balance ratio (EBR) of 0.65 is obtained in the region. The best closure occurred in the afternoon peaking shortly before sunset with a different pattern and intensity between the study sites. The size and shape of the annual mean half-hourly turbulent flux footprint climatology was analyzed. On average, 80% of the flux footprint was emitted from a radius of approximately 250 m around the EC stations. Moreover, the overall shape of the flux footprints was in good agreement with the prevailing wind direction for all three TERENO EC sites.
Interaction Between Eddies and Mean Flow in Jupiter's Atmosphere: Analysis of Cassini Imaging Data
NASA Technical Reports Server (NTRS)
Salyk, Colette; Ingersoll, Andrew P.; Lorre, Jean; Vasavada, Ashwin; DelGenio, Anthony D.
2006-01-01
Beebe et al. [Beebe, R.F., et al., 1980. Geophys. Res. Lett. 17, 1-4] and Ingersoll et al. [Ingersoll, A.P., et al., 1981. J. Geophys. Res. 86, 8733-8743] used images from Voyagers 1 and 2 to analyze the interaction between zonal winds and eddies in Jupiter's atmosphere. They reported a high positive correlation between Jupiter's eddy momentum flux, pu'v', and the variation of zonal velocity with latitude, du/dy. This correlation implied a surprisingly high rate of conversion of energy from eddies to zonal flow: approx. 1.5-3.0 W/sq m, a value more than 10% of Jupiter s thermal flux emission. However, Sromovsky et al. [Sromovsky, L.A., et al., 1982. J. Atmos. Sci. 39,1413-1432] argued that possible biases in the analysis could have caused an artificially high correlation. In addition, significant differences in the derived eddy flux between datasets put into question the robustness of any one result. We return to this long-standing puzzle using images of Jupiter from the Cassini flyby of December 2000. Our method is similar to previous analyses, but utilizes an automatic feature tracker instead of the human eye. The number of velocity vectors used in this analysis is over 200,000, compared to the 14,000 vectors used by Ingersoll et al. We also find a positive correlation between u'v' and du/dy and derive a global average power per unit mass, u'v' du/dy, ranging from (7.1-12.3) x 10(exp -5)W/kg. Utilizing Ingersoll et al.'s estimate of the mass per unit area involved in the transport, this would imply a rate of energy conversion of approx.0.7-1.2 W/sq m. We discuss the implications of this result and employ several tests to demonstrate its robustness.
Effect of canopy and topography induced wakes on land-atmosphere fluxes of momentum and scalars
NASA Astrophysics Data System (ADS)
Markfort, C. D.; Zhang, W.; Porté-Agel, F.; Stefan, H. G.
2012-04-01
Wakes shed from natural and anthropogenic landscape features affect land-atmosphere fluxes of momentum and scalars, including water vapor and trace gases (e.g. CO2). Canopies and bluff bodies, such as forests, buildings and topography, cause boundary layer flow separation, and lead to a break down of standard Monin-Obukhov similarity relationships in the atmospheric boundary layer (ABL). Wakes generated by these land surface features persist for significant distances (>100 typical length scales) and affect a large fraction of the Earth's terrestrial surface. This effect is currently not accounted for in land-atmosphere models, and little is known about how heterogeneity of wake-generating features affect land surface fluxes. Additionally flux measurements, made in wake-affected regions, do not satisfy the homogeneous flow requirements for the standard eddy correlation (EC) method. This phenomenon, often referred to as wind sheltering, has been shown to affect momentum and kinetic energy fluxes at the lake-atmosphere interface (Markfort et al. 2010). This presentation will highlight results from controlled wind tunnel experiments of neutral and thermally stratified boundary layers, using particle image velocimetry (PIV) and custom x-wire/cold-wire anemometry, to understand how the physical structure of upstream bluff bodies and porous canopies as well as how thermal stability affect the flow separation zone, boundary layer recovery and surface fluxes. We have found that there is a nonlinear relationship between canopy length/porosity and flow separation downwind of a canopy to clearing transition. Results will provide the basis for new parameterizations to account for wake effects on land-atmosphere fluxes and corrections for the EC measurements over open fields, lakes, and wetlands. Key words: Atmospheric boundary layer; Wakes; Stratification; Land-Atmosphere Parameterization; Canopy
NASA Astrophysics Data System (ADS)
Grant, R. F.; Mekonnen, Z. A.; Riley, W. J.; Arora, B.; Torn, M. S.
2017-12-01
Differences of surface elevation in arctic polygonal landforms cause spatial variation in soil water contents (θ), active layer depths (ALD), and thereby in CO2 and CH4 exchange. Here we test hypotheses in ecosys for topographic controls on CO2 and CH4 exchange in trough, rim, and center features of low- and flat-centered polygons (LCP and FCP) against chamber and eddy covariance (EC) measurements during 2013 at Barrow, Alaska. Larger CO2 influxes and CH4 effluxes were measured with chambers and modeled with ecosys in LCPs than in FCPs and in lower features (troughs) than in higher (rims) within LCPs and FCPs. Spatially aggregated CO2 and CH4 fluxes from ecosys were significantly correlated with EC flux measurements. Lower features were modeled as C sinks (52-56 g C m-2 yr-1) and CH4 sources (4-6 g C m-2 yr-1), and higher features as near C neutral (-2-15 g C m-2 yr-1) and CH4 neutral (0.0-0.1 g C m-2 yr-1). Much of the spatial and temporal variations in CO2 and CH4 fluxes were modeled from topographic effects on water and snow movement and thereby on θ, ALD, and soil O2 concentrations. Model results forced with meteorological data from 1981 to 2015 indicated increasing net primary productivity in higher features and CH4 emissions in some lower and higher features since 2008, attributed mostly to recent rises in precipitation. Small-scale variation in surface elevation causes large spatial variation of greenhouse gas (GHG) exchanges and therefore should be considered in estimates of GHG exchange in polygonal landscapes.
NASA Astrophysics Data System (ADS)
Yao, Yunjun; Liang, Shunlin; Yu, Jian; Zhao, Shaohua; Lin, Yi; Jia, Kun; Zhang, Xiaotong; Cheng, Jie; Xie, Xianhong; Sun, Liang; Wang, Xuanyu; Zhang, Lilin
2017-04-01
Accurate estimates of terrestrial latent heat of evaporation (LE) for different biomes are essential to assess energy, water and carbon cycles. Different satellite- based Priestley-Taylor (PT) algorithms have been developed to estimate LE in different biomes. However, there are still large uncertainties in LE estimates for different PT algorithms. In this study, we evaluated differences in estimating terrestrial water flux in different biomes from three satellite-based PT algorithms using ground-observed data from eight eddy covariance (EC) flux towers of China. The results reveal that large differences in daily LE estimates exist based on EC measurements using three PT algorithms among eight ecosystem types. At the forest (CBS) site, all algorithms demonstrate high performance with low root mean square error (RMSE) (less than 16 W/m2) and high squared correlation coefficient (R2) (more than 0.9). At the village (HHV) site, the ATI-PT algorithm has the lowest RMSE (13.9 W/m2), with bias of 2.7 W/m2 and R2 of 0.66. At the irrigated crop (HHM) site, almost all models algorithms underestimate LE, indicating these algorithms may not capture wet soil evaporation by parameterization of the soil moisture. In contrast, the SM-PT algorithm shows high values of R2 (comparable to those of ATI-PT and VPD-PT) at most other (grass, wetland, desert and Gobi) biomes. There are no obvious differences in seasonal LE estimation using MODIS NDVI and LAI at most sites. However, all meteorological or satellite-based water-related parameters used in the PT algorithm have uncertainties for optimizing water constraints. This analysis highlights the need to improve PT algorithms with regard to water constraints.
DOE Office of Scientific and Technical Information (OSTI.GOV)
Muñoz-Esparza, D.; Kosović, B.; Beeck, J. van
2015-03-15
Despite the variety of existing methods, efficient generation of turbulent inflow conditions for large-eddy simulation (LES) models remains a challenging and active research area. Herein, we extend our previous research on the cell perturbation method, which uses a novel stochastic approach based upon finite amplitude perturbations of the potential temperature field applied within a region near the inflow boundaries of the LES domain [Muñoz-Esparza et al., “Bridging the transition from mesoscale to microscale turbulence in numerical weather prediction models,” Boundary-Layer Meteorol., 153, 409–440 (2014)]. The objective was twofold: (i) to identify the governing parameters of the method and their optimummore » values and (ii) to generalize the results over a broad range of atmospheric large-scale forcing conditions, U{sub g} = 5 − 25 m s{sup −1}, where U{sub g} is the geostrophic wind. We identified the perturbation Eckert number, Ec=U{sub g}{sup 2}/ρc{sub p}θ{sup ~}{sub pm}, to be the parameter governing the flow transition to turbulence in neutrally stratified boundary layers. Here, θ{sup ~}{sub pm} is the maximum perturbation amplitude applied, c{sub p} is the specific heat capacity at constant pressure, and ρ is the density. The optimal Eckert number was found for nonlinear perturbations allowed by Ec ≈ 0.16, which instigate formation of hairpin-like vortices that most rapidly transition to a developed turbulent state. Larger Ec numbers (linear small-amplitude perturbations) result in streaky structures requiring larger fetches to reach the quasi-equilibrium solution, while smaller Ec numbers lead to buoyancy dominated perturbations exhibiting difficulties for hairpin-like vortices to emerge. Cell perturbations with wavelengths within the inertial range of three-dimensional turbulence achieved identical quasi-equilibrium values of resolved turbulent kinetic energy, q, and Reynolds-shear stress, . In contrast, large-scale perturbations acting at the production range exhibited reduced levels of , due to the formation of coherent streamwise structures, while q was maintained, requiring larger fetches for the turbulent solution to stabilize. Additionally, the cell perturbation method was compared to a synthetic turbulence generator. The proposed stochastic approach provided at least the same efficiency in developing realistic turbulence, while accelerating the formation of large-scales associated with production of turbulent kinetic energy. Also, it is computationally inexpensive and does not require any turbulent information.« less
NASA Astrophysics Data System (ADS)
Schafer, K. V.; Duman, T.
2017-12-01
The New Jersey Meadowlands are an urban brackish marsh with a long history of human activity causing disturbances and alterations. Carbon emissions were measured from two sites in the Meadowlands, a natural site and a restored site, using eddy-covariance (EC) from 2014 to 2016. At each site, the EC towers were placed at the interface of two vegetation covers, allowing capturing this aspect of the wetland's heterogeneity. Using footprint modeling and light response curves we were able to partition measured fluxes between vegetation cover types and compare CO2 fluxes from patches of invasive versus native wetland vegetation communities. We show that further separating the data into seasonal and diurnal fluxes reveals patterns in CO2 fluxes that allow determining the nature of each vegetation cover as a source or sink for CO2. Our results also show that CO2 emissions from the restored wetland are significantly higher than the natural wetland. Areas of invasive Phragmites australis at the natural site had the lowest CO2 release rates during winter. These were consistently lower in magnitude than summer daytime uptake, therefore making this part of the wetland a CO2 sink. Areas planted with native Spartina alterniflora at the restored site had the largest uptake during daytime, therefore seemingly justifying restoration activities. However, they also had the highest emission rates during summer nighttime, and therefore the daily summer net uptake was not the highest compared with other vegetation covers. Furthermore, emissions from the restored site during winter were larger compared to the natural site, indicating that restoration activities might have led to a significant increase of carbon release from the wetland. Thus, during the study period the restored wetland acted as a carbon source.
Evaluation of Two Energy Balance Closure Parametrizations
NASA Astrophysics Data System (ADS)
Eder, Fabian; De Roo, Frederik; Kohnert, Katrin; Desjardins, Raymond L.; Schmid, Hans Peter; Mauder, Matthias
2014-05-01
A general lack of energy balance closure indicates that tower-based eddy-covariance (EC) measurements underestimate turbulent heat fluxes, which calls for robust correction schemes. Two parametrization approaches that can be found in the literature were tested using data from the Canadian Twin Otter research aircraft and from tower-based measurements of the German Terrestrial Environmental Observatories (TERENO) programme. Our analysis shows that the approach of Huang et al. (Boundary-Layer Meteorol 127:273-292, 2008), based on large-eddy simulation, is not applicable to typical near-surface flux measurements because it was developed for heights above the surface layer and over homogeneous terrain. The biggest shortcoming of this parametrization is that the grid resolution of the model was too coarse so that the surface layer, where EC measurements are usually made, is not properly resolved. The empirical approach of Panin and Bernhofer (Izvestiya Atmos Oceanic Phys 44:701-716, 2008) considers landscape-level roughness heterogeneities that induce secondary circulations and at least gives a qualitative estimate of the energy balance closure. However, it does not consider any feature of landscape-scale heterogeneity other than surface roughness, such as surface temperature, surface moisture or topography. The failures of both approaches might indicate that the influence of mesoscale structures is not a sufficient explanation for the energy balance closure problem. However, our analysis of different wind-direction sectors shows that the upwind landscape-scale heterogeneity indeed influences the energy balance closure determined from tower flux data. We also analyzed the aircraft measurements with respect to the partitioning of the "missing energy" between sensible and latent heat fluxes and we could confirm the assumption of scalar similarity only for Bowen ratios 1.
Large eddy simulation of incompressible turbulent channel flow
NASA Technical Reports Server (NTRS)
Moin, P.; Reynolds, W. C.; Ferziger, J. H.
1978-01-01
The three-dimensional, time-dependent primitive equations of motion were numerically integrated for the case of turbulent channel flow. A partially implicit numerical method was developed. An important feature of this scheme is that the equation of continuity is solved directly. The residual field motions were simulated through an eddy viscosity model, while the large-scale field was obtained directly from the solution of the governing equations. An important portion of the initial velocity field was obtained from the solution of the linearized Navier-Stokes equations. The pseudospectral method was used for numerical differentiation in the horizontal directions, and second-order finite-difference schemes were used in the direction normal to the walls. The large eddy simulation technique is capable of reproducing some of the important features of wall-bounded turbulent flows. The resolvable portions of the root-mean square wall pressure fluctuations, pressure velocity-gradient correlations, and velocity pressure-gradient correlations are documented.
NASA Astrophysics Data System (ADS)
Dandapat, S.; Chakraborty, A.
2016-12-01
A comprehensive study on the statistics and variability of mesoscale eddies in the North Indian Ocean (NIO) are investigated using satellite altimetry data for the period of 1993-2014. A hybrid algorithm based on the physical and geometrical properties of mesoscale eddies is applied to detect the eddies and track their propagation. The potential eddies with radius larger than 50 km and lifespan longer than 30 days are considered for the analysis. The NIO consists of two unique tropical basins with the high number of eddy generations and activity: the Arabian Sea (AS) and the Bay of Bengal (BOB). It is noticed that the occurrence of cyclonic eddies (CEs) are found to be significant in AS, while the anticyclonic eddies (ACEs) dominate the BOB. In both the oceans eddies mostly propagate westward. The AS eddies showed the higher mean values, propagation speed, mean radius, mean lifetime than BOB eddies. In the AS, it is found that eddies formed on the western side of the basin persist longer and move towards north where as the number of eddies in the eastern coast of the basin is fewer and short lived. In the BOB, two highly eddy productive zones are identified: offshore of Visakhapatnam and the northern part of western BOB. The occurrence of ACEs dominate the offshore of Visakhapatnam, whereas the CEs in the northern part of western BOB. The ACEs are larger but the CEs have longer lifetime and are more energetic in the BOB. Along with the statistical properties, we also examined the eddy temporal variability in seasonal scale and their structural properties from ARGO data in the NIO. The seasonal variations are found to be significant in AS and BOB and in both the oceans significant correlation has been found between the eddy genesis and local wind stress curl. The strong positive wind stress curl during summer favors the formation of more CEs. In general, both ACEs and CEs in the NIO have single-core vertical structure with the core at a depth of about 100-200 dbar.
Learning-related skills and academic achievement in academically at-risk first graders
Cerda, Carissa A.; Im, Myung Hee; Hughes, Jan N.
2015-01-01
Using an academically at-risk, ethnically diverse sample of 744 first-grade children, this study tested a multi-method (i.e., child performance measures, teacher ratings, and peer ratings) measurement model of learning-related skills (i.e., effortful control [EC], behavioral self-regulation [BSR], and social competence [SC]), and their shared and unique contributions to children's reading and math achievement, above the effect of demographic variables. The hypothesized correlated factor measurement model demonstrated relatively good fit, with BSR and SC correlated highly with one another and moderately with EC. When entered in separate regression equations, EC and BSR each predicted children's reading and math achievement; SC only predicted reading achievement. When considered simultaneously, neither EC, BSR, nor SC contributed independently to reading achievement; however, EC had a direct effect on math achievement and an indirect effect on reading achievement via both BSR and SC. Implications for research and early intervention efforts are discussed. PMID:25908886
Feng, Fei; Li, Xianglan; Yao, Yunjun; Liang, Shunlin; Chen, Jiquan; Zhao, Xiang; Jia, Kun; Pintér, Krisztina; McCaughey, J. Harry
2016-01-01
Accurate estimation of latent heat flux (LE) based on remote sensing data is critical in characterizing terrestrial ecosystems and modeling land surface processes. Many LE products were released during the past few decades, but their quality might not meet the requirements in terms of data consistency and estimation accuracy. Merging multiple algorithms could be an effective way to improve the quality of existing LE products. In this paper, we present a data integration method based on modified empirical orthogonal function (EOF) analysis to integrate the Moderate Resolution Imaging Spectroradiometer (MODIS) LE product (MOD16) and the Priestley-Taylor LE algorithm of Jet Propulsion Laboratory (PT-JPL) estimate. Twenty-two eddy covariance (EC) sites with LE observation were chosen to evaluate our algorithm, showing that the proposed EOF fusion method was capable of integrating the two satellite data sets with improved consistency and reduced uncertainties. Further efforts were needed to evaluate and improve the proposed algorithm at larger spatial scales and time periods, and over different land cover types. PMID:27472383
Feng, Fei; Li, Xianglan; Yao, Yunjun; Liang, Shunlin; Chen, Jiquan; Zhao, Xiang; Jia, Kun; Pintér, Krisztina; McCaughey, J Harry
2016-01-01
Accurate estimation of latent heat flux (LE) based on remote sensing data is critical in characterizing terrestrial ecosystems and modeling land surface processes. Many LE products were released during the past few decades, but their quality might not meet the requirements in terms of data consistency and estimation accuracy. Merging multiple algorithms could be an effective way to improve the quality of existing LE products. In this paper, we present a data integration method based on modified empirical orthogonal function (EOF) analysis to integrate the Moderate Resolution Imaging Spectroradiometer (MODIS) LE product (MOD16) and the Priestley-Taylor LE algorithm of Jet Propulsion Laboratory (PT-JPL) estimate. Twenty-two eddy covariance (EC) sites with LE observation were chosen to evaluate our algorithm, showing that the proposed EOF fusion method was capable of integrating the two satellite data sets with improved consistency and reduced uncertainties. Further efforts were needed to evaluate and improve the proposed algorithm at larger spatial scales and time periods, and over different land cover types.
NASA Astrophysics Data System (ADS)
Yi, C.; Davis, K. J.; Bakwin, P. S.; Berger, B. W.; Marr, L. C.
2000-04-01
In most studies of the net ecosystem-atmosphere exchange of CO2 (NEE) using tower-based eddy covariance (EC) systems it has been assumed that advection is negligible. In this study we use a scalar conservation budget method to estimate the contribution of advection to NEE measurements from a very tall tower in northern Wisconsin. We examine data for June-August 1997. Measured NEE0, calculated as the sum of the EC flux plus the rate of change of storage below the EC measurement level, is expected to be constant with measurement height, and we take the differences between levels as a measure of advection. We find that the average difference in total advection ΔFCadtot between 30 and 122 m is as large as 6 μmol m-2s-1 during the morning transition from stable to convective conditions and the average difference ΔFCadtot between 122 and 396 m is as large as 4 μmol m-2s-1 during daytime. For the month of July, advection between 30 and 122 m is 27% of the diurnally integrated NEE0 at 122 m, and advection between 122 and 396 m accounts for 5% of the NEE0 observed at 396 m. The observed differences of advection often have significant correlation with the vertical integral of wind speed within the same layer. This indicates that the horizontal advection contribution to NEE could be significant. Direct observations of the vertical gradient in CO2 show that ΔFCadtot cannot be explained by vertical advection alone. It is hypothesized that differing flux footprints and pooling of CO2 in the heterogeneous landscape causes the advection contribution. The magnitudes of the total advection component FCadtot of NEE at the 30 m level are roughly estimated by a linear extrapolation. A peak in FCadtot at 30 m of ˜ 3 μmol m-2 s-1 during the morning transition is predicted for all three months. The July integrated FCadtot is estimated to be 10% of the diurnally integrated NEE0 at 30 m.
Associations between eating competence and cardiovascular disease biomarkers.
Psota, Tricia L; Lohse, Barbara; West, Sheila G
2007-01-01
Explore the relationship between eating competence (EC) and biomarkers of risk for cardiovascular disease (CVD). Secondary analysis of data collected for a larger, 2-way crossover clinical trial. Outpatient clinical research center. Forty-eight hypercholesterolemic (LDL cholesterol > or = 110 mg/dL) men (n = 19) and women (n = 29) 21 to 70 years of age. Participant descriptives, cardiovascular disease biomarker levels, and eating competence (EC) determined by the ecSatter Inventory (ecSI). T tests for differences in eating competence between males and females, analysis of variance for differences in risk between those categorized as EC or not. Associations between EC and baseline biochemical measures, as well as participant characteristics and dietary intake, were assessed by Pearson correlation analyses. Logistic regression estimated relative risk of CVD risk factors from ecSI scores. Several significant associations were found between EC total and CVD risk factors. Eating competence was positively correlated with HDL-cholesterol, and inversely associated with systolic and diastolic blood pressure. High EC participants had significantly lower ratios of total cholesterol: HDL-cholesterol and triglycerides: HDL-cholesterol. Participants who were not eating competent were 5 times more likely to have LDL-cholesterol levels > or =130 mg/dL and 7 times more likely to have triglyceride levels > or =150 mg/dL. Eating competence appears to be a cognitive, affective construct with physiological manifestations, making nutrition education to increase eating competence a medical nutrition therapy.
Brosten, Troy R.; Day-Lewis, Frederick D.; Schultz, Gregory M.; Curtis, Gary P.; Lane, John W.
2011-01-01
Electromagnetic induction (EMI) instruments provide rapid, noninvasive, and spatially dense data for characterization of soil and groundwater properties. Data from multi-frequency EMI tools can be inverted to provide quantitative electrical conductivity estimates as a function of depth. In this study, multi-frequency EMI data collected across an abandoned uranium mill site near Naturita, Colorado, USA, are inverted to produce vertical distribution of electrical conductivity (EC) across the site. The relation between measured apparent electrical conductivity (ECa) and hydraulic conductivity (K) is weak (correlation coefficient of 0.20), whereas the correlation between the depth dependent EC obtained from the inversions, and K is sufficiently strong to be used for hydrologic estimation (correlation coefficient of − 0.62). Depth-specific EC values were correlated with co-located K measurements to develop a site-specific ln(EC)–ln(K) relation. This petrophysical relation was applied to produce a spatially detailed map of K across the study area. A synthetic example based on ECa values at the site was used to assess model resolution and correlation loss given variations in depth and/or measurement error. Results from synthetic modeling indicate that optimum correlation with K occurs at ~ 0.5 m followed by a gradual correlation loss of 90% at 2.3 m. These results are consistent with an analysis of depth of investigation (DOI) given the range of frequencies, transmitter–receiver separation, and measurement errors for the field data. DOIs were estimated at 2.0 ± 0.5 m depending on the soil conductivities. A 4-layer model, with varying thicknesses, was used to invert the ECa to maximize available information within the aquifer region for improved correlations with K. Results show improved correlation between K and the corresponding inverted EC at similar depths, underscoring the importance of inversion in using multi-frequency EMI data for hydrologic estimation.
Brosten, T.R.; Day-Lewis, F. D.; Schultz, G.M.; Curtis, G.P.; Lane, J.W.
2011-01-01
Electromagnetic induction (EMI) instruments provide rapid, noninvasive, and spatially dense data for characterization of soil and groundwater properties. Data from multi-frequency EMI tools can be inverted to provide quantitative electrical conductivity estimates as a function of depth. In this study, multi-frequency EMI data collected across an abandoned uranium mill site near Naturita, Colorado, USA, are inverted to produce vertical distribution of electrical conductivity (EC) across the site. The relation between measured apparent electrical conductivity (ECa) and hydraulic conductivity (K) is weak (correlation coefficient of 0.20), whereas the correlation between the depth dependent EC obtained from the inversions, and K is sufficiently strong to be used for hydrologic estimation (correlation coefficient of -0.62). Depth-specific EC values were correlated with co-located K measurements to develop a site-specific ln(EC)-ln(K) relation. This petrophysical relation was applied to produce a spatially detailed map of K across the study area. A synthetic example based on ECa values at the site was used to assess model resolution and correlation loss given variations in depth and/or measurement error. Results from synthetic modeling indicate that optimum correlation with K occurs at ~0.5m followed by a gradual correlation loss of 90% at 2.3m. These results are consistent with an analysis of depth of investigation (DOI) given the range of frequencies, transmitter-receiver separation, and measurement errors for the field data. DOIs were estimated at 2.0??0.5m depending on the soil conductivities. A 4-layer model, with varying thicknesses, was used to invert the ECa to maximize available information within the aquifer region for improved correlations with K. Results show improved correlation between K and the corresponding inverted EC at similar depths, underscoring the importance of inversion in using multi-frequency EMI data for hydrologic estimation. ?? 2011.
NASA Astrophysics Data System (ADS)
Liu, Baoshuang; Bi, Xiaohui; Feng, Yinchang; Dai, Qili; Xiao, Zhimei; Li, Liwei; Wu, Jianhui; Yuan, Jie; Zhang, YuFen
2016-11-01
The OC/EC online monitoring campaign was carried out in Tianjin of China from 8th February to 15th March 2015 during the Chinese Spring Festival period (CSFP). The concentrations of OC, EC, BC and other ambient pollutants (e.g. SO2, NO2 and PM2.5, etc.) in high time resolution were measured with related online-monitoring instruments. During the CSFP, according to the peaks of PM2.5 concentrations and number concentrations (NC) of aerosol particles with aerodynamic diameters between 0.3 and 2.5 μm, five pollution-events were generally identified and displayed. These pollution-events were closely associated with large-scale fireworks displaying, combustion activities such as heating for winter, and the stable meteorological conditions, etc. During the CSFP, EC and OC concentrations showed variations up to one order of magnitude. The uncertainty of instrument itself and the difference for measured methods, further caused the differences between thermal OC (measured OC by thermal method) and optical OC (measured OC by optical method) concentrations, as well as between thermal EC (measured EC by thermal method) and optical EC (measured EC by optical method) concentrations. The high-concentration carbonaceous aerosols could enlarge the uncertainty of measuring instrument, reducing the correlations between OC and EC, and enhance the differences among thermal EC, optical BC and optical EC. The OC/EC ratios and the percentages of SOC/OC would be declined, when the pollution-events formed during the CSFP. Due to the different sources for thermal POC and thermal SOC, the correlation of the two was relatively lower (R2 = 0.39). Thermal POC dominated over thermal OC during the CSFP.
Evaluation of resin infiltration using quantitative light-induced fluorescence technology.
Min, Ji-Hyun; Inaba, Daisuke; Kim, Baek-Il
2016-09-01
To determine whether quantitative light-induced fluorescence (QLF) technology can be used to classify the colour of teeth specimens before and after resin infiltration (RI) treatment, and calculate the correlation between the ΔF value and colour difference (ΔE) in fluorescence images of the specimens obtained using a QLF-digital (QLF-D) device. Sixty sound bovine permanent teeth specimens were immersed in demineralized solution. Two exposed windows were formed in each specimen, and RI treatment was applied to one of them. The ΔE values were obtained for the differences between a sound tooth surface (SS), an early dental caries surface (ECS) and an ECS treated with RI (RS) in white-light and fluorescence images obtained using QLF-D, respectively. The ΔF value was obtained from fluorescence images using dedicated software for QLF-D. The mean differences between the ΔE values obtained from the white-light and fluorescence images were analyzed by paired t-test. Pearson correlation analysis and Bland-Altman plots were applied to the differences between the ΔF value for ECS (ΔFSS-ECS) and the ΔE value between SS and ECS (ΔESS-ECS), and between the ΔF value for RS (ΔFSS-RS) and the ΔE value between SS and RS (ΔESS-RS) in fluorescence images. The ΔE values obtained from fluorescence images were three times higher than the ΔE values obtained from white-light images (p<0.001). Significant correlations were confirmed between ΔESS-ECS and ΔFSS-ECS (r=-0.492, p<0.001) and between ΔESS-RS and ΔFSS-RS (r=-0.661, p<0.001). QLF technology can be used to confirm the presence of RI in teeth. Copyright © 2016 Elsevier B.V. All rights reserved.
Terhorst, D; Koti, I; Krause, K; Metz, M; Maurer, M
2018-03-01
Chronic spontaneous urticaria (CSU) is an inflammatory skin disorder characterized by recurrent weals, angio-oedema or both. Recent studies have shown that the number of endothelial cells is increased in the skin of patients with CSU, but the underlying mechanisms and clinical implications of this are unclear. To evaluate whether mast cell (MC) or endothelial cell (EC) numbers correlate with CSU and whether they are relevant for disease duration, disease activity or the presence of clinical features. We determined the numbers of CD31+ ECs and MCs in nonlesional skin of 30 patients with CSU using quantitative histomorphometry, and assessed their correlation with each other and with clinical features such as disease duration, disease activity and occurrence of angio-oedema. The numbers of MCs and ECs were high in the nonlesional skin of patients with CSU, but did not correlate with each other. Neither MC number nor EC number correlated with disease duration or disease activity. Interestingly, patients with high numbers of cutaneous CD31+ ECs had higher rates of recurrent angio-oedema and vice versa. Based on these findings, we speculate that vascular remodelling and MC hyperplasia in patients with CSU occurs independently and via different mechanisms. Targeting of the mechanisms that drive neoangiogenesis in CSU may result in novel therapeutic strategies for the management of patients with angio-oedema. © 2017 British Association of Dermatologists.
Measuring epistemic curiosity and its diversive and specific components.
Litman, Jordan A; Spielberger, Charles D
2003-02-01
A questionnaire constructed to assess epistemic curiosity (EC) and perceptual curiosity (PC) curiosity was administered to 739 undergraduates (546 women, 193 men) ranging in age from 18 to 65. The study participants also responded to the trait anxiety, anger, depression, and curiosity scales of the State-Trait Personality Inventory (STPI; Spielberger et al., 1979) and selected subscales of the Sensation Seeking (SSS; Zuckerman, Kolin, Price, & Zoob, 1964) and Novelty Experiencing (NES; Pearson, 1970) scales. Factor analyses of the curiosity items with oblique rotation identified EC and PC factors with clear simple structure. Subsequent analyses of the EC items provided the basis for developing an EC scale, with Diversive and Specific Curiosity subscales. Moderately high correlations of the EC scale and subscales with other measures of curiosity provided strong evidence of convergent validity. Divergent validity was demonstrated by minimal correlations with trait anxiety and the sensation-seeking measures, and essentially zero correlations with the STPI trait anger and depression scales. Male participants had significantly higher scores on the EC scale and the NES External Cognition subscale (effect sizes of r =.16 and.21, respectively), indicating that they were more interested than female participants in solving problems and discovering how things work. Male participants also scored significantly higher than female participants on the SSS Thrill-and-Adventure and NES External Sensation subscales (r =.14 and.22, respectively), suggesting that they were more likely to engage in sensation-seeking activities.
Toward relaxed eddy accumulation measurements of sediment-water exchange in aquatic ecosystems
NASA Astrophysics Data System (ADS)
Lemaire, Bruno J.; Noss, Christian; Lorke, Andreas
2017-09-01
Solute transport across the sediment-water interface has major implications for water quality and biogeochemical cycling in aquatic ecosystems. Existing measurement techniques, however, are not capable of resolving sediment-water fluxes of most constituents under in situ flow conditions. We investigated whether relaxed eddy accumulation (REA), a micrometeorological technique with conditional sampling of turbulent updrafts and downdrafts, can be adapted to the aquatic environment. We simulated REA fluxes by reanalyzing eddy covariance measurements from a riverine lake. We found that the empirical coefficient that relates mass fluxes to the concentration difference between both REA samples is invariant with scalar and flow and responds as predicted by a joint Gaussian distribution of linearly correlated variables. Simulated REA fluxes differed on average by around 30% from eddy covariance fluxes (mean absolute error). Assessment of the lower quantification limit suggests that REA can potentially be applied for measuring benthic fluxes of a new range of constituents that cannot be assessed by standard eddy covariance methods.
Mishra, Priyadarshini; Singh, Alok Pratap; Kanaujia, Vikas; Agarwal, Rachna; Mishra, Prabhaker; Guleria, Ashwani; Tripathi, Alka
2017-09-01
The purpose of this study is to measure intraocular pressure (IOP) and evaluate the correlation between IOP and midnight plasma cortisol (MPC) level in patients with Cushing's disease (CD) and other endogenous Cushing's syndrome (ECS). This is a cross-sectional study from a single center including newly diagnosed patients with CD or ECS. All patients underwent detailed ophthalmological evaluation. IOP was measured by Goldmann applanation tonometry in the morning and evening on two consecutive days. MPC value was obtained for each patient. The data were compared using paired and unpaired t-test, Mann-Whitney U-test, and Spearman's rank correlation coefficient. Among 32 patients, 22 were CD (68.75%) and 10 patients were other ECS (31.25%). A total of 25 patients (78.12%) in our study group had normal IOP (<22 mmHg), and seven patients (21.88%) had increased IOP (≥22 mmHg). The percentage of patients with normal IOP was found to be significantly higher compared to percentage of patients with high IOP (P = 0.001) using one-sample Chi-square test. Mean MPC value was 468.6 ± 388.3 nmol/L in patients having IOP ≥22 mmHg and 658.5 ± 584 nmol/L in those with IOP <22 mmHg from both CD and ECS groups, but the difference was not statistically significant. No correlation was found between IOP and MPC (Spearman's rank correlation rho = -0.16 [P = 0.38]). In CD and ECS patients, IOP elevation is an uncommon feature, and high IOP in either group does not correlate with MPC level.
NASA Astrophysics Data System (ADS)
Wu, S. H.; Jansson, P.-E.
2013-02-01
Recovery of photosynthesis and transpiration is strongly restricted by low temperatures in air and/or soil during the transition period from winter to spring in boreal zones. The extent to which air temperature (Ta) and soil temperature (Ts) influence the seasonality of photosynthesis and transpiration of a boreal spruce ecosystem was investigated using a process-based ecosystem model (CoupModel) together with eddy covariance (EC) data from one eddy flux tower and nearby soil measurements at Knottåsen, Sweden. A Monte Carlo-based uncertainty method (GLUE) provided prior and posterior distributions of simulations representing a wide range of soil conditions and performance indicators. The simulated results showed sufficient flexibility to predict the measured cold and warm Ts in the moist and dry plots around the eddy flux tower. Moreover, the model presented a general ability to describe both biotic and abiotic processes for the Norway spruce stand. The dynamics of sensible heat fluxes were well described by the corresponding latent heat fluxes and net ecosystem exchange of CO2. The parameter ranges obtained are probably valid to represent regional characteristics of boreal conifer forests, but were not easy to constrain to a smaller range than that produced by the assumed prior distributions. Finally, neglecting the soil temperature response function resulted in fewer behavioural models and probably more compensatory errors in other response functions for regulating the seasonality of ecosystem fluxes.
E-cigarette use among smokers with serious mental illness.
Prochaska, Judith J; Grana, Rachel A
2014-01-01
We examined electronic cigarette (EC) use, correlates of use, and associated changes in smoking behavior among smokers with serious mental illness in a clinical trial. Adult smokers were recruited during acute psychiatric hospitalization (N = 956, 73% enrollment among approached smokers) in the San Francisco Bay Area between 2009-2013. At baseline, participants averaged 17 (SD = 10) cigarettes per day for 19 (SD = 14) years; 24% intended to quit smoking in the next month. Analyses examined frequency and correlates of EC use reported over the 18-month trial and changes in smoking behavior by EC use status. EC use was 11% overall, and by year of enrollment, increased from 0% in 2009 to 25% in 2013. In multiple logistic regression, the likelihood of EC use was significantly greater with each additional year of recruitment, for those aged 18-26, and for those in the preparation versus precontemplation stage of change, and unlikely among Hispanic participants. EC use was unrelated to gender, psychiatric diagnosis, and measures of tobacco dependence at baseline. Further, over the 18-month trial, EC use was not associated with changes in smoking status or, among continued smokers, with reductions in cigarettes per day. Within a clinical trial with smokers with serious mental illness, EC use increased over time, particularly among younger adults and those intending to quit tobacco. EC use was unrelated to changes in smoking. The findings are of clinical interest and warrant further study.
Dendaas, Nancy
2011-01-01
To describe the degree to which Environmental Congruence (EC) is present in sampled units and considered important/desirable by staff RNs; staff RNs' reported level of work-related stress (WRS); the perceived contribution of the physical environment to WRS; and the relationship between existing levels of EC and WRS. Few studies have focused on how the physical environment might contribute to nurses' WRS and chronic nursing shortages. The construct of EC can be used, within a Person Environment (PE)-Fit framework, to assess the fit among nurses, nursing work, the physical work environment, and WRS. EC was measured using investigator-developed, literature/criterion-based survey instruments. Staff RNs reported WRS variables by using two single-item self-report measures. The final convenience sample consisted of 471 staff RNs from 39 medical/surgical units from 12 hospitals in the upper Midwest. Data were collected over a 7-month period. The mean level of existing EC in the sample was roughly 70% percent of highest capacity and that of important/desired EC in the sample was 93%. Staff RNs' mean level of WRS was 6.7; the mean contribution of the physical environment to WRS was 5.8. Moderate negative correlations were found between EC and WRS (r = -.41, p < .05), and between physical environment contribution to WRS and EC (r = -.55, p <.001). Staff RNs in the sampled units wanted a significantly higher level of EC. They rated their WRS moderately high and the contribution of the physical environment to it as moderate. A moderately negative relationship was found between EC and WRS. EC may be a useful construct in research that attempts to improve hospital nursing work environments.
Safavi, Arash; Lai, Sarah; Butterworth, Sonia; Hameed, Morad; Schiller, Dan; Skarsgard, Erik
2012-01-01
Background Identification of attributes of residency training that predict competency would improve surgical education. We hypothesized that case experience during residency would correlate with self-reported competency of recent graduates. Methods Aggregate case log data of residents enrolled in 2 general surgery programs were collected over a 12-month period and stratified into Surgical Council on Resident Education (SCORE) categories. We surveyed recent (< 5 yr) residency graduates on procedural competency. Resident case volumes were correlated with survey responses by SCORE category. Results In all, 75 residents performed 11 715 operations, which were distributed by SCORE category as follows: essential-common (EC) 9935 (84.8%), essential-uncommon (EU) 889 (7.6%) and complex 891 (7.6%). Alimentary tract procedures were the most commonly performed EC (2386, 24%) and EU (504, 56.7%) procedures. The least common EC procedure was plastic surgery (4, 0.04%), and the least common EU procedure was abdomen–spleen (1, 0.1%). The questionnaire response rate was 45%. For EC procedures, self-reported competency was highest in skin and soft tissue, thoracic and head and neck (each 100%) and lowest in vascular–venous (54%), whereas for EU procedures it was highest in abdomen–general (100%) and lowest in vascular–arterial (62%). The correlation between case volume and self-reported competency was poor (R = 0.2 for EC procedures). Conclusion Self-reported competency correlates poorly with operative case experience during residency. Other curriculum factors, including specific rotations and timing, balance between inpatient and outpatient surgical experience and competition for cases, may contribute to procedural competency acquisition during residency. PMID:22854144
Data on assessment of groundwater quality with application of ArcGIS in Zanjan, Iran.
Asghari, Farzaneh Baghal; Mohammadi, Ali Akbar; Dehghani, Mohammad Hadi; Yousefi, Mahmood
2018-06-01
The aim of this study was to Monitoring of physical and chemical characteristics of ground water including Ca 2+ , Mg 2+ , EC, pH, TDS, TH, H C O 3 - , Na + , K + , Cl - , SAR, %Na and S O 4 2 - in Zanjan city, Iran. For assessing the physic-chemical parameters from 15 wells, water samples 4 times at different times were collected and examined. Data were analyzed using R and Arc GIS software. According to the calculated correlation coefficients, the highest correlation Coefficient belonged to TDS-EC while H C O 3 - and Cl - showed low and weak correlations. However, Na + , Mg 2+ , K + , Ca 2+ exhibited good positive correlations with EC and TDS. The results show that the water in the study area at the time of the study was based on the WHO standards and appropriate for drinking.
DOE Office of Scientific and Technical Information (OSTI.GOV)
Wharton, S; Schroeder, M; Paw U, K T
2009-01-08
Carbon dioxide, water vapor and energy fluxes were measured using eddy covariance (EC) methodology over three adjacent forests in southern Washington State to identify stand-level age-effects on ecosystem exchange. The sites represent Douglas-fir forest ecosystems at two contrasting successional stages: old-growth (OG) and early seral (ES). Here we present eddy flux and meteorological data from two early seral stands and the Wind River AmeriFlux old-growth forest during the growing season (March-October) in 2006 and 2007. We show an alternative approach to the usual friction velocity (u*) method for determining periods of adequate atmospheric boundary layer (ABL) mixing based on themore » ratio of mean horizontal ({bar u}) and vertical ({bar w}) wind flow to a modified turbulent kinetic energy scale (uTKE). This new parameter in addition to footprint modeling showed that daytime CO{sub 2} fluxes (F{sub NEE}) in small clear-cuts (< 10 hectares) can be measured accurately with EC if micrometeorological conditions are carefully evaluated. Peak midday CO{sub 2} fluxes (F{sub NEE} = -14.0 to -12.3 {micro}mol m{sup -2} s{sup -1}) at OG were measured in April in both 2006 and 2007 before bud break when air and soil temperatures and vapor pressure deficit were relatively low, and soil moisture and light levels were favorable for photosynthesis. At the early seral stands, peak midday CO{sub 2} fluxes (F{sub NEE} = -11.0 to -8.7 {micro}mol m{sup -2} s{sup -1}) were measured in June and July while spring-time CO{sub 2} fluxes were much smaller (F{sub NEE} = -3.8 to -3.6 {micro}mol m{sup -2} s{sup -1}). Overall, we measured lower evapotranspiration (OG = 230 mm; ES = 297 mm) higher midday F{sub NEE} (OG F{sub NEE} = -9.0 {micro}mol m{sup -2} s{sup -1}; ES F{sub NEE} = -7.3 {micro}mol m{sup -2} s{sup -1}) and higher Bowen ratios (OG {beta} = 2.0. ES {beta} = 1.2) at the old-growth forest than at the ES sites during the summer months (May-August). Eddy covariance studies such as ours add critical land-atmosphere exchange data for an abundant, but rarely studied Douglas-fir age class.« less
NASA Astrophysics Data System (ADS)
Sabbatini, S.; Fratini, G.; Arriga, N.; Papale, D.
2012-04-01
Eddy Covariance (EC) is the only technologically available direct method to measure carbon and energy fluxes between ecosystems and atmosphere. However, uncertainties related to this method have not been exhaustively assessed yet, including those deriving from post-field data processing. The latter arise because there is no exact processing sequence established for any given situation, and the sequence itself is long and complex, with many processing steps and options available. However, the consistency and inter-comparability of flux estimates may be largely affected by the adoption of different processing sequences. The goal of our work is to quantify the uncertainty introduced in each processing step by the fact that different options are available, and to study how the overall uncertainty propagates throughout the processing sequence. We propose an easy-to-use methodology to assign a confidence level to the calculated fluxes of energy and mass, based on the adopted processing sequence, and on available information such as the EC system type (e.g. open vs. closed path), the climate and the ecosystem type. The proposed methodology synthesizes the results of a massive full-factorial experiment. We use one year of raw data from 15 European flux stations and process them so as to cover all possible combinations of the available options across a selection of the most relevant processing steps. The 15 sites have been selected to be representative of different ecosystems (forests, croplands and grasslands), climates (mediterranean, nordic, arid and humid) and instrumental setup (e.g. open vs. closed path). The software used for this analysis is EddyPro™ 3.0 (www.licor.com/eddypro). The critical processing steps, selected on the basis of the different options commonly used in the FLUXNET community, are: angle of attack correction; coordinate rotation; trend removal; time lag compensation; low- and high- frequency spectral correction; correction for air density fluctuations; and length of the flux averaging interval. We illustrate the results of the full-factorial combination relative to a subset of the selected sites with particular emphasis on the total uncertainty at different time scales and aggregations, as well as a preliminary analysis of the most critical steps for their contribution to the total uncertainties and their potential relation with site set-up characteristics and ecosystem type.
ERP Correlates of Effortful Control in Children with Varying Levels of ADHD Symptoms
ERIC Educational Resources Information Center
Wiersema, Jan R.; Roeyers, Herbert
2009-01-01
As effortful control (EC), the self-regulation aspect of temperament, has been argued to play a key role in the normal and psychopathological course of development, research adding to the construct validity of EC is needed. In the current study, interrelations between the temperament construct of EC and the efficiency of the executive attention…
Evaluating Micrometeorological Estimates of Groundwater Discharge from Great Basin Desert Playas
NASA Astrophysics Data System (ADS)
Jackson, T.; Halford, K. J.; Gardner, P.
2017-12-01
Groundwater availability studies in the arid southwestern United States traditionally have assumed that groundwater discharge by evapotranspiration (ETg) from desert playas is a significant component of the groundwater budget. This result occurs because desert playa ETg rates are poorly constrained by Bowen Ratio energy budget (BREB) and eddy-covariance (EC) micrometeorological measurement approaches. Best attempts by previous studies to constrain ETg from desert playas have resulted in ETg rates that are below the detection limit of micrometeorological approaches. This study uses numerical models to further constrain desert playa ETg rates that are below the detection limit of EC (0.1 mm/d) and BREB (0.3 mm/d) approaches, and to evaluate the effect of hydraulic properties and salinity-based groundwater-density contrasts on desert playa ETg rates. Numerical models simulated ETg rates from desert playas in Death Valley, California and Dixie Valley, Nevada. Results indicate that actual ETg rates from desert playas are significantly below the upper detection limits provided by the BREB- and EC-based micrometeorological measurements. Discharge from desert playas contribute less than 2 percent of total groundwater discharge from Dixie and Death Valleys, which suggests discharge from desert playas is negligible in other basins. Numerical simulation results also show that ETg from desert playas primarily is limited by differences in hydraulic properties between alluvial fan and playa sediments and, to a lesser extent, by salinity-based groundwater density contrasts.
Turbulent Eddies in a Compressible Jet in Crossflow Measured using Pulse-Burst PIV
NASA Astrophysics Data System (ADS)
Beresh, Steven; Wagner, Justin; Henfling, John; Spillers, Russell; Pruett, Brian
2015-11-01
Pulse-burst Particle Image Velocimetry (PIV) has been employed to acquire time-resolved data at 25 kHz of a supersonic jet exhausting into a subsonic compressible crossflow. Data were acquired along the windward boundary of the jet shear layer and used to identify turbulent eddies as they convect downstream in the far-field of the interaction. Eddies were found to have a tendency to occur in closely-spaced counter-rotating pairs and are routinely observed in the PIV movies, but the variable orientation of these pairs makes them difficult to detect statistically. Correlated counter-rotating vortices are more strongly observed to pass by at a larger spacing, both leading and trailing the reference eddy. This indicates the paired nature of the turbulent eddies and the tendency for these pairs to convect through the field of view at repeatable spacings. Velocity spectra reveal a peak at a frequency consistent with this larger spacing between shear-layer vortices rotating with identical sign. Super-sampled velocity spectra to 150 kHz reveal a power-law dependency of -5/3 in the inertial subrange as well as a -1 dependency at lower frequencies attributed to the scales of the dominant shear-layer eddies.
Nishiguchi, Yuki; Takano, Keisuke; Tanno, Yoshihiko
2016-07-30
Previous studies have shown a negative correlation between effortful control (EC) and depressive symptoms. EC is defined as the efficiency of executive attention, which may be reduced by the attentional impairment associated with depression. However, the mechanism underlying this correlation is still unclear. We investigated the relationship between EC and depressive symptoms with the hypothesis that cognitive motivation, or need for cognition (NfC), is a possible mediator of this relationship. Participants were 178 Japanese university students. Each completed the Zung Self-Rating Depression Scale, Effortful Control Scale, and Need for Cognition Scale at baseline and follow-up assessments. Supporting our hypothesis, mediation analyses revealed a significant indirect effect of depressive symptoms on EC that was mediated by NfC. In addition, our data demonstrated a direct effect of depressive symptoms on EC. Longitudinal analysis indicated that an increase in depression and a decrease in NfC occurred synchronously, while NfC predicted an increase in EC over time. Depressive symptoms may decrease executive functioning and effortful control both directly and indirectly, the latter effect being mediated by motivation. These findings imply that a motivational deficit may partially explain the decreased EC found in people suffering from depression. Copyright © 2016 Elsevier Ireland Ltd. All rights reserved.
Reliability of the ecSatter Inventory as a tool to measure eating competence.
Stotts, Jodi L; Lohse, Barbara
2007-01-01
To examine the reliability of the ecSatter Inventory (ecSI), a measure of eating competence. Self-report questionnaires were administered in person or by mail. Retesting occurred 2 to 6 weeks after completion of the first questionnaire. Both administrations of the questionnaire were completed by 259 participants who were mostly food secure, white females with some college education; mean age was 26.9 +/- 10.4 years. Test-retest reliability and internal consistency. Spearman's rank correlation coefficients to estimate test-retest reliability and Cronbach alpha coefficients to estimate internal consistency. Spearman's rank correlation coefficient for ecSI total score was 0.68; subscale coefficients were 0.70 for eating attitudes, 0.70 for contextual skills, 0.65 for food acceptance, and 0.52 for internal regulation. Cronbach alpha coefficient for ecSI total score was 0.77. Subscale alphas coefficients were 0.80 for eating attitudes, 0.69 for contextual skills, 0.68 for food acceptance, and 0.66 for internal regulation. This study provides psychometric evidence about the reliability of ecSI as a measure of eating competence in this sample. Although some ecSI items may require revision, results suggest that the instrument may be used to evaluate nutrition education designed to improve eating competence.
Parameter studies on the energy balance closure problem using large-eddy simulation
NASA Astrophysics Data System (ADS)
De Roo, Frederik; Banerjee, Tirtha; Mauder, Matthias
2017-04-01
The imbalance of the surface energy budget in eddy-covariance measurements is still a pending problem. A possible cause is the presence of land surface heterogeneity. Heterogeneities of the boundary layer scale or larger are most effective in influencing the boundary layer turbulence, and large-eddy simulations have shown that secondary circulations within the boundary layer can affect the surface energy budget. However, the precise influence of the surface characteristics on the energy imbalance and its partitioning is still unknown. To investigate the influence of surface variables on all the components of the flux budget under convective conditions, we set up a systematic parameter study by means of large-eddy simulation. For the study we use a virtual control volume approach, and we focus on idealized heterogeneity by considering spatially variable surface fluxes. The surface fluxes vary locally in intensity and these patches have different length scales. The main focus lies on heterogeneities of length scales of the kilometer scale and one decade smaller. For each simulation, virtual measurement towers are positioned at functionally different positions. We discriminate between the locally homogeneous towers, located within land use patches, with respect to the more heterogeneous towers, and find, among others, that the flux-divergence and the advection are strongly linearly related within each class. Furthermore, we seek correlators for the energy balance ratio and the energy residual in the simulations. Besides the expected correlation with measurable atmospheric quantities such as the friction velocity, boundary-layer depth and temperature and moisture gradients, we have also found an unexpected correlation with the temperature difference between sonic temperature and surface temperature. In additional simulations with a large number of virtual towers, we investigate higher order correlations, which can be linked to secondary circulations. In a companion presentation (EGU2017-2130) these correlations are investigated and confirmed with the help of micrometeorological measurements from the TERENO sites where the effects of landscape scale surface heterogeneities are deemed to be important.
Czarnecki, John B.; Stannard, David I.
1997-01-01
Franklin Lake playa is one of the principal discharge areas of the ground-water-flow system associated with Yucca Mountain, Nevada, the potential site of a high-level nuclear-waste repository. By using the energy-budget eddy-correlation technique, measurements made between June 1983 and April 1984 to estimate evapotranspiration were found to range from 0.1 centimeter per day during winter months to about 0.3 centimeter per day during summer months; the annual average was 0.16 centimeter per day. These estimates were compared with evapotranspiration estimates calculated from six other methods.
Net carbon balance of three full crop rotations at an agricultural site near Gebesee, Germany
NASA Astrophysics Data System (ADS)
Hurkuck, M.; Brümmer, C.; Kolle, O.; Kutsch, W. L.; Moffat, A. M.; Mukwashi, K.; Truckenbrodt, S. C.; Herbst, M.
2015-12-01
Continuous eddy-covariance (EC) measurements of biosphere-atmosphere CO2 and H2O exchange have been conducted since 2001 at an agricultural site near Gebesee, Germany, thus providing one of the longest EC time series of European croplands. During the experimental period, winter wheat and winter barley were alternately planted with potatoes, sugar beet, rape, and peppermint covering three full crop rotations (2001-2004, 2005-2009, and 2010-2014). In this study, data of 14 years of net ecosystem CO2 exchange (NEE) and evapotranspiration (E) were re-calculated. Based on these data, we present the net carbon (C) balance (net biome production, NBP) accounting for any additional C input by fertilization and C output by harvest. Further emphasis was placed on the sensitivity of water use efficiency (WUE) and E to climate and crop type. The main aim was to investigate the interannual variability in both NBP and WUE, thus disentangling the impacts of climatic conditions and land management on the net C balance as well as on WUE and E.
On the Space-Time Structure of Sheared Turbulence
NASA Astrophysics Data System (ADS)
de Maré, Martin; Mann, Jakob
2016-09-01
We develop a model that predicts all two-point correlations in high Reynolds number turbulent flow, in both space and time. This is accomplished by combining the design philosophies behind two existing models, the Mann spectral velocity tensor, in which isotropic turbulence is distorted according to rapid distortion theory, and Kristensen's longitudinal coherence model, in which eddies are simultaneously advected by larger eddies as well as decaying. The model is compared with data from both observations and large-eddy simulations and is found to predict spatial correlations comparable to the Mann spectral tensor and temporal coherence better than any known model. Within the developed framework, Lagrangian two-point correlations in space and time are also predicted, and the predictions are compared with measurements of isotropic turbulence. The required input to the models, which are formulated as spectral velocity tensors, can be estimated from measured spectra or be derived from the rate of dissipation of turbulent kinetic energy, the friction velocity and the mean shear of the flow. The developed models can, for example, be used in wind-turbine engineering, in applications such as lidar-assisted feed forward control and wind-turbine wake modelling.
[The Expression of Pokemon in Endometrial Carcinoma Tissue and the Correlation with Mutant p53].
Yi, Tian-jin; Wang, Ping
2016-05-01
To detect the expression of Pokemon in endometrial carcinoma (EC), to provide preliminary theoretical basis for clarifying pathogenesis and searching for effective targets. Ninety-eight cases of endometrial tissue paraffin specimens form July 2012 to July 2014 in West China Second University Hospital, Sichuan University, were collected, including: EC group, consisting of adenocarcinoma 23 cases, adenosquamous 12 cases, serous 3 cases, mucinous 11 cases and clear cell 9 cases, and control group, consisting of atypical hyperplasia endometrium 20 cases and normal endometrium 20 cases (secretory 10 cases, hyperplasia 10 cases). Immunohistochemistry was used to detect the expression of Pokemonin each section, analyzing the correlation of Pokemon expression with clinicopathologic characteristics and p53 expression. The positive rate of Pokemon in normal endometrium was 25% (5/20), significantly lower than that in atypical hyperplasia endometrium (60.0%, 12/20) and EC (93.1%, 54/58) (P < 0.05); the rate in type II was 97. 12% (34/35), significantly higher than that in type I (86.96%, 20/23) (P = 0.018). The positive rate of Pokemon in III-IV stage, type II and Ki-67 ≥ 50 EC tissue was much higher (P = 0.012, 0.023, 0.029). In type II EC tissue, the correlation index between Pokemon and p53 is 0.669 (P = 0.000). The over expression of Pokemon upregulates the expression of mutant p53, which may be one of the carcinogenesis modes in type II EC.
Kwan, Suet-Ying; Chen, Limo; Chen, Jin-Hong; Ying, Zuo-Lin; Zhou, Ye; Gu, Wei; Wang, Li-Hua; Cheng, Wei-Wei; Zeng, Jianfang; Wan, Xiao-Ping; Mok, Samuel C.; Wong, Kwong-Kwok; Bao, Wei
2015-01-01
Epidemiological evidence suggests that elevated androgen levels and genetic variation related to the androgen receptor (AR) increase the risk of endometrial cancer (EC). However, the role of AR in EC is poorly understood. We report that two members of the histone demethylase KDM4 family act as major regulators of AR transcriptional activityin EC. In the MFE-296 cell line, KDM4B and AR upregulate c-myc expression, while in AN3CA cells KDM4A and AR downregulate p27kip1. Additionally, KDM4B expression is positively correlated with AR expression in EC cell lines with high baseline AR expression, while KDM4A and AR expression are positively correlated in low-AR cell lines. In clinical specimens, both KDM4B and KDM4A expression are significantly higher in EC tissues than that in normal endometrium. Finally, patients with alterations in AR, KDM4B, KDM4A, and c-myc have poor overall and disease-free survival rates. Together, these findings demonstrate that KDM4B and KDM4A promote EC progression by regulating AR activity. PMID:26397136
NASA Astrophysics Data System (ADS)
Meijide, A.; Manca, G.; Goded, I.; Magliulo, V.; di Tommasi, P.; Seufert, G.; Cescatti, A.
2011-12-01
Rice paddy fields are one of the greatest anthropogenic sources of methane (CH4), the third most important greenhouse gas after water vapour and carbon dioxide. In agricultural fields, CH4 is usually measured with the closed chamber technique, resulting in discontinuous series of measurements performed over a limited area, that generally do not provide sufficient information on the short-term variation of the fluxes. On the contrary, aerodynamic techniques have been rarely applied for the measurement of CH4 fluxes in rice paddy fields. The eddy covariance (EC) technique provides integrated continuous measurements over a large area and may increase our understanding of the underlying processes and diurnal and seasonal pattern of CH4 emissions in this ecosystem. For this purpose a Fast Methane Analyzer (Los Gatos Research Ltd.) was installed in a rice paddy field in the Po Valley (Northern Italy). Methane fluxes were measured during the rice growing season with both EC and manually operated closed chambers. Methane fluxes were strongly influenced by the height of the water table, with emissions peaking when it was above 10-12 cm. Soil temperature and the developmental stage of rice plants were also responsible of the seasonal variation on the fluxes. The measured EC fluxes showed a diurnal cycle in the emissions, which was more relevant during the vegetative period, and with CH4 emissions being higher in the late evening, possibly associated with higher water temperature. The comparison between the two measurement techniques shows that greater fluxes are measured with the chambers, especially when higher fluxes are being produced, resulting in 30 % higher seasonal estimations with the chambers than with the EC (41.1 and 31.7 g CH4 m-2 measured with chambers and EC respectively) and even greater differences are found if shorter periods with high chamber sampling frequency are compared. The differences may be a result of the combined effect of overestimation with the chambers and of the possible underestimation by the EC technique.
DOE Office of Scientific and Technical Information (OSTI.GOV)
Phillips, Claire L.; Bond-Lamberty, Ben; Desai, Ankur R.
A recent acceleration of model-data synthesis activities has leveraged many terrestrial carbon (C) datasets, but utilization of soil respiration (RS) data has not kept pace with other types such as eddy covariance (EC) fluxes and soil C stocks. Here we argue that RS data, including non-continuous measurements from survey sampling campaigns, have unrealized value and should be utilized more extensively and creatively in data synthesis and modeling activities. We identify three major challenges in interpreting RS data, and discuss opportunities to address them. The first challenge is that when RS is compared to ecosystem respiration (RECO) measured from EC towers,more » it is not uncommon to find substantial mismatch, indicating one or both flux methodologies are unreliable. We argue the most likely cause of mismatch is unreliable EC data, and there is an unrecognized opportunity to utilize RS for EC quality control. The second challenge is that RS integrates belowground heterotrophic (RH) and autotrophic (RA) activity, whereas modelers generally prefer partitioned fluxes, and few models include an explicit RS output. Opportunities exist to use the total RS flux for data assimilation and model benchmarking methods rather than less-certain partitioned fluxes. Pushing for more experiments that not only partition RS but also monitor the age of RA and RH, as well as for the development of belowground RA components in models, would allow for more direct comparison between measured and modeled values. The third challenge is that soil respiration is generally measured at a very different resolution than that needed for comparison to EC or ecosystem- to global-scale models. Measuring soil fluxes with finer spatial resolution and more extensive coverage, and downscaling EC fluxes to match the scale of RS, will improve chamber and tower comparisons. Opportunities also exist to estimate RH at regional scales by implementing decomposition functional types, akin to plant functional types. We conclude by discussing the benefits that wide use of RS data will bring to model development, and database developments that will make RS data more robust, useful, and broadly available to the research community.« less
Micrometeorological flux measurements at a coastal site
NASA Astrophysics Data System (ADS)
Song, Guozheng; Meixner, Franz X.; Bruse, Michael; Mamtimin, Buhalqem
2014-05-01
The eddy covariance (EC) technique is the only direct measurement of the momentum, heat, and trace gas (e.g. water vapor, CO2 and ozone) fluxes. The measurements are expected to be most accurate over flat terrain where there is an extended homogenous surface upwind from the tower, and when the environmental conditions are steady. Additionally, the one dimensional approach assumes that vertical turbulent exchange is the dominant flux, whereas advective influences should be negligible. The application of EC method under non-ideal conditions, for example in complex terrain, has yet to be fully explored. To explore the possibilities and limitations of EC technique under non-ideal conditions, an EC system was set up at Selles beach, Crete, Greece (35.33°N, 25.71°E) in the beginning of July 2012. The dominant wind direction was west, parallel to the coast. The EC system consisted of a sonic anemometer (CSAT3 Campbell Scientific), an infrared open-path CO2/H2O gas analyzer (LI-7500, Li-COR Biosciences) and a fast chemiluminescence ozone analyzer (enviscope GmbH). All the signals of these fast response instruments were sampled at 10 Hz and the measurement height was 3 m. Besides, another gradient system was setup. Air temperature, relative humidity (HYGROMER MP 103 A), and wind speed (WMT700 Vaisala) were measured every 10 seconds at 3 heights (0.7, 1.45, 3 m). Air intakes were set up at 0.7m and 3m. A pump drew the air through a flow system and a telflon valve alternately switched between the two heights every 30 seconds. H2O, CO2 (LI-840A, Li-COR Biosciences) and ozone mixing ratio s (model 205, 2BTechnologies) were measured every 10 seconds. Momentum, heat, CO2 and ozone fluxes were evaluated by both EC and gradient technique. For the calculation of turbulent fluxes, TK3 algorithm (Department of Micrometeorology, University Bayreuth, Germany) was applied. We will present the measured fluxes of the two systems and assess the data quality under such non-ideal condition.
Key, Peter B; Fulton, Michael H
2006-03-01
Three life stages of larval grass shrimp were tested to determine whether acetylcholinesterase (AChE) activity expressed as 24-h sublethal effect endpoints (EC20 and EC50) could be used to predict 96-h mortality (lowest observable effect concentration (LOEC) and LC50) for shrimp exposed to three organophosphate insecticides. With regard to mortality, newly hatched larvae and 18-day-old larvae were the most sensitive in the malathion and azinphosmethyl exposures. In the chlorpyrifos exposures, newly hatched larvae and postlarvae were the most sensitive life stages. Results of the 24-h AChE inhibition tests showed that newly hatched larvae were generally more sensitive in the three organophosphate exposures. A regression analysis of the EC50's and LC50's yielded the strongest correlation with R2=0.987 (correlation coefficient=0.994 and 95% confidence intervals 0.969-0.999). The LOEC/EC20 relationship yielded R2=0.962. For these grass shrimp life stages and pesticides, sublethal effect endpoints could be used as a predictor of 96-h mortality.
NASA Astrophysics Data System (ADS)
Smith, Murray J.; Walker, Carolyn F.; Bell, Thomas G.; Harvey, Mike J.; Saltzman, Eric S.; Law, Cliff S.
2018-04-01
Direct measurements of marine dimethylsulfide (DMS) fluxes are sparse, particularly in the Southern Ocean. The Surface Ocean Aerosol Production (SOAP) voyage in February-March 2012 examined the distribution and flux of DMS in a biologically active frontal system in the southwest Pacific Ocean. Three distinct phytoplankton blooms were studied with oceanic DMS concentrations as high as 25 nmol L-1. Measurements of DMS fluxes were made using two independent methods: the eddy covariance (EC) technique using atmospheric pressure chemical ionization-mass spectrometry (API-CIMS) and the gradient flux (GF) technique from an autonomous catamaran platform. Catamaran flux measurements are relatively unaffected by airflow distortion and are made close to the water surface, where gas gradients are largest. Flux measurements were complemented by near-surface hydrographic measurements to elucidate physical factors influencing DMS emission. Individual DMS fluxes derived by EC showed significant scatter and, at times, consistent departures from the Coupled Ocean-Atmosphere Response Experiment gas transfer algorithm (COAREG). A direct comparison between the two flux methods was carried out to separate instrumental effects from environmental effects and showed good agreement with a regression slope of 0.96 (r2 = 0.89). A period of abnormal downward atmospheric heat flux enhanced near-surface ocean stratification and reduced turbulent exchange, during which GF and EC transfer velocities showed good agreement but modelled COAREG values were significantly higher. The transfer velocity derived from near-surface ocean turbulence measurements on a spar buoy compared well with the COAREG model in general but showed less variation. This first direct comparison between EC and GF fluxes of DMS provides confidence in compilation of flux estimates from both techniques, as well as in the stable periods when the observations are not well predicted by the COAREG model.
The surface renewal method for better spatial resolution of evapotranspiration measurements
NASA Astrophysics Data System (ADS)
Suvocarev, K.; Fischer, M.; Massey, J. H.; Reba, M. L.; Runkle, B.
2017-12-01
Evaluating feasible irrigation strategies when water is scarce requires measurements or estimations of evapotranspiration (ET). Direct observations of ET from agricultural fields are preferred, and micrometeorological methods such as eddy covariance (EC) provide a high quality, continuous time series of ET. However, when replicates of the measurements are needed to compare irrigation strategies, the cost of such experiments is often prohibitive and limits experimental scope. An alternative micrometeorological approach to ET, the surface renewal (SR) method, may be reduced to a thermocouple and a propeller anemometer (Castellvi and Snyder, 2009). In this case, net radiation, soil and sensible heat flux (H) are measured and latent heat flux (an energy equivalent for ET) is estimated as the residual of the surface energy-balance equation. In our experiment, thermocouples (Type E Fine-Wire Thermocouple, FW3) were deployed next to the EC system and combined with mean horizontal wind speed measurements to obtain H using SR method for three weeks. After compensating the temperature signal for non-ideal frequency response in the wavelet half-plane and correcting the sonic anemometer for the flow distortion (Horst et al., 2015), the SR H fluxes compared well to those measured by EC (r2 = 0.9, slope = 0.92). This result encouraged us to install thermocouples over 16 rice fields under different irrigation treatments (continuous cascade flood, continuous multiple inlet rice irrigation, alternate wetting and drying, and furrow irrigation). The EC measurements with net radiometer and soil heat flux plates are deployed at three of these fields to provide a direct comparison. The measurement campaign will finish soon and the data will be processed to evaluate the SR approach for ET estimation. The results will be used to show better spatial resolution of ET measurements to support irrigation decisions in agricultural crops.
Albert, Loren P; Keenan, Trevor F; Burns, Sean P; Huxman, Travis E; Monson, Russell K
2017-05-01
Eddy covariance (EC) datasets have provided insight into climate determinants of net ecosystem productivity (NEP) and evapotranspiration (ET) in natural ecosystems for decades, but most EC studies were published in serial fashion such that one study's result became the following study's hypothesis. This approach reflects the hypothetico-deductive process by focusing on previously derived hypotheses. A synthesis of this type of sequential inference reiterates subjective biases and may amplify past assumptions about the role, and relative importance, of controls over ecosystem metabolism. Long-term EC datasets facilitate an alternative approach to synthesis: the use of inductive data-based analyses to re-examine past deductive studies of the same ecosystem. Here we examined the seasonal climate determinants of NEP and ET by analyzing a 15-year EC time-series from a subalpine forest using an ensemble of Artificial Neural Networks (ANNs) at the half-day (daytime/nighttime) time-step. We extracted relative rankings of climate drivers and driver-response relationships directly from the dataset with minimal a priori assumptions. The ANN analysis revealed temperature variables as primary climate drivers of NEP and daytime ET, when all seasons are considered, consistent with the assembly of past studies. New relations uncovered by the ANN approach include the role of soil moisture in driving daytime NEP during the snowmelt period, the nonlinear response of NEP to temperature across seasons, and the low relevance of summer rainfall for NEP or ET at the same daytime/nighttime time step. These new results offer a more complete perspective of climate-ecosystem interactions at this site than traditional deductive analyses alone.
Catalina Eddy as revealed by the historical downscaling of reanalysis
NASA Astrophysics Data System (ADS)
Kanamitsu, Masao; Yulaeva, Elena; Li, Haiqin; Hong, Song-You
2013-08-01
Climatological properties, dynamical and thermodynamical characteristics of the Catalina Eddy are examined from the 61 years NCEP/NCAR Reanalysis downscaled to hourly 10 km resolution. The eddy is identified as a mesoscale cyclonic circulation confined to the Southern California Bight. Pattern correlation of wind direction against the canonical Catalina Eddy is used to extract cases from the downscaled analysis. Validation against published cases and various observations confirmed that the downscaled analysis accurately reproduces Catalina Eddy events. A composite analysis of the initiation phase of the eddy indicates that no apparent large-scale cyclonic/anti-cyclonic large-scale forcing is associated with the eddy formation or decay. The source of the vorticity is located at the coast of the Santa Barbara Channel. It is generated by the convergence of the wind system crossing over the San Rafael Mountains and the large-scale northwesterly flow associated with the subtropical high. This vorticity is advected towards the southeast by the northwesterly flow, which contributes to the formation of the streak of positive vorticity. At 6 hours prior to the mature stage, there is an explosive generation of positive vorticity along the coast, coincident with the phase change of the sea breeze circulation (wind turning from onshore to offshore), resulting in the convergence all along the California coast. The generation of vorticity due to convergence along the coast together with the advection of vorticity from the north resulted in the formation of southerly flow along the coast, forming the Catalina Eddy. The importance of diurnal variation and the lack of large-scale forcing are new findings, which are in sharp contrast to prior studies. These differences are due to the inclusion of many short-lived eddy events detected in our study which have not been included in other studies.
Zonal migration and transport variations of the Kuroshio east of Taiwan induced by eddy impingements
NASA Astrophysics Data System (ADS)
Chang, Ming-Huei; Jan, Sen; Mensah, Vigan; Andres, Magdalena; Rainville, Luc; Yang, Yiing Jang; Cheng, Yu-Hsin
2018-01-01
Variability of the Kuroshio east of Taiwan was observed at a cross-stream transect 50 km south of the PCM-1 line with an array of three moored ADCPs measuring for 23 months, supplemented with eleven repeated shipboard surveys. Observations of the Kuroshio's velocity structure reveal the absence of an obvious regular seasonal signal, but significant variability at 70-200 day period for both maximum velocity axis migration and transport due to interactions with mesoscale eddies. Empirical orthogonal function (EOF) analysis shows the migration and transport modes explain 46% and 29% of the total variance, respectively, which is in contrast to the findings at the PCM-1 line where the transport mode explained more variance than did the migration mode. The Kuroshio transport in the upper 500 m across a 150 km section is 17.2 Sv with a standard deviation of 5 Sv. The estimated Kuroshio transport is 4.3 Sv lower than that reported for the PCM-1 line, likely due to the interannual variations related to abundance of mesoscale eddies in the Subtropical Counter Current (STCC) region. Transport variability east of Taiwan is mostly caused by Kuroshio-eddy interactions. When single anticyclonic (cyclonic) eddies encounter the Kuroshio, they enhance (reduce) poleward transport, presumably by increasing (decreasing) the sea level anomaly (SLA) along the eastern flank of the Kuroshio (correlation = 0.82). When a pair of eddies impinges on the Kuroshio, the upstream confluence and diffluence caused by the dipole eddies increases and decreases the Kuroshio transport, respectively. Furthermore, the eastward (westward) currents that result from either the single eddy or the dipole eddy produce flow divergence (convergence) adjacent to the Kuroshio's eastern edge, favoring the offshore (onshore) migration of the Kuroshio axis.
Influence of Kuroshio Oceanic Eddies on North Pacific Weather Patterns
NASA Astrophysics Data System (ADS)
Ma, X.; Chang, P.; Saravanan, R.; Montuoro, R.; Hsieh, J. S.; Wu, D.; Lin, X.; Wu, L.; Jing, Z.
2016-02-01
High-resolution satellite observations reveal energetic meso-scale ocean eddy activity and positive correlation between meso-scale sea surface temperature (SST) and surface wind along oceanic frontal zones, such as the Kuroshio and Gulf Stream, suggesting a potential role of meso-scale oceanic eddies in forcing the atmosphere. Using a 27 km horizontal resolution Weather Research Forecasting (WRF) model forced with observed daily SST at 0.09° spatial resolution during boreal winter season, two ensembles of 10 WRF simulations, in one of which meso-scale SST variability induced by ocean eddies was suppressed, were conducted in the North Pacific to study the local and remote influence of meso-scale oceanic eddies in the Kuroshio Extention Region (KER) on the atmosphere. Suppression of meso-scale oceanic eddies results in a deep tropospheric response along and downstream of the KER, including a significant decrease (increase) in winter season mean rainfall along the KER (west coast of US), a reduction of storm genesis in the KER, and a southward shift of the jet stream and North Pacific storm track in the eastern North Pacific. The simulated local and remote rainfall response to meso-scale oceanic eddies in the KER is also supported by observational analysis. A mechanism invoking moist baroclinic instability is proposed as a plausible explanation for the linkage between meso-scale oceanic eddies in the KER and large-scale atmospheric response in the North Pacific. It is argued that meso-scale oceanic eddies can have a rectified effect on planetary boundary layer moisture, the stability of the lower atmosphere and latent heat release, which in turn affect cyclogenesis. The accumulated effect of the altered storm development downstream further contributes to the equivalent barotropic mean flow change in the eastern North Pacific basin.
NASA Astrophysics Data System (ADS)
Mancilla, Yasmany; Herckes, Pierre; Fraser, Matthew P.; Mendoza, Alberto
2015-02-01
Air pollution caused by fine particles is a problem of great concern in the Monterrey Metropolitan Area (MMA) which is the third largest city and the second most important industrial center in Mexico. In this study, samples of fine particulate matter emissions with an aerodynamic diameter of less than 2.5 μm (PM2.5) were collected for 12-hour periods during the spring and fall of 2011 and 2012. Eighty-three samples were analyzed for organic carbon (OC) and elemental carbon (EC). The carbonaceous fraction (OC + EC) accounted for 28-55% of the PM2.5 mass. The average OC/EC ratios ranged from 7.4 to 12.6, and OC and EC concentrations were statistically significant correlated (R2 = 0.81, p < 0.01). The secondary organic aerosol (SOA) contributions were determined using two approaches: the EC tracer method based on a primary OC/EC ratio derived from a tunnel study and the minimum observed OC/EC ratio. SOAs were determined to constitute, on average, 59-87% and 32-45% of the total OC and PM2.5, respectively. The relationship between O3 and wind speed indicated that pollutant levels were influenced by transport events during the spring, while stagnation events predominated during the fall campaigns. Statistically significant correlations were observed between OC and EC and gaseous species (CO, NOx, and SO2), indicating a contribution by combustion of fossil fuels to the carbonaceous material.
NASA Technical Reports Server (NTRS)
Donaldson, C. D.
1973-01-01
The question is considered of how complex a model should be used for the calculation of turbulent shear flows. At the present time there are models varying in complexity from very simple eddy-transport models to models in which all the equations for the nonzero second-order correlations are solved simultaneously with the equations for the mean variables. A discussion is presented of the relationship between these two models of turbulent shear flow. Two types of motion are discussed: first, turbulent shear flow in a stratified medium and, second, the motion in a turbulent line vortex. These two cases are instructive because in the first example eddy-transport methods have proven reasonably effective, whereas in the second, they have led to erroneous conclusions. It is not generally appreciated that the simplest form of eddy-transport theory can be derived from second-order closure models of turbulent flow by a suitably limiting process. This limiting process and the suitability of eddy-transport modeling for stratified media and line vortices are discussed.
Carranza-Lira, Sebastián
2016-01-01
Emotional intelligence is our capacity to acknowledge our own emotions, and the emotions of other people; it also has to do with the way emotions must be understood, and used productively. Given that an altered state of mind can have an impact on emotional intelligence, our objective was to correlate the psychological state with emotional intelligence in residents of gynecology, and obstetrics. We assessed 76 gynecology and obstetrics residents by using What's my M3 and TMMS-24 instruments, in order to know the influence of psychological state on emotional intelligence. In male students of second grade, there was a positive correlation between obsessive-compulsive disorder (OCD) and emotional attention (EA), and a negative correlation with emotional clarity (EC). In third grade males, anxiety, bipolar disorder, and posttraumatic stress disorder (PTSD) correlated positively with EA. In male students of fourth grade there was a positive correlation between OCD and EA. In second grade female students, depression correlated negatively with emotional repair (ER). In third grade female students anxiety, bipolar disorder, and PTSD correlated positively with EA. In fourth grade female students there was a negative correlation between depression and EA, and between anxiety, OCD, and PTSD with EC. Psychological status has a favorable impact on EA and a negative effect on EC and ER.
Cui, Kaixiang; Wu, Qun; Xu, Yan
2018-02-14
It is important to reduce the concentration of ethyl carbamate (EC) in fermented foods. However, controlling the formation of EC and its precursor urea is difficult in spontaneous food fermentation because urea is a natural product of nitrogen metabolism. Biodegradation is a better solution to reduce the concentration of EC. This study aimed to reduce the concentration of EC in Chinese liquor via an indigenous strain Lysinibacillus sphaericus MT33. This strain produced urethanase (940 U/L) and urease (1580 U/L) and degraded 76.52% of EC and 56.48% of urea. After inoculation in liquor fermentation, the maximal relative abundance of Lysinibacillus increased from 0.02% to 8.46%, the final EC and urea contents decreased by 41.77% and 28.15%. Moreover, the concentration of EC decreased by 63.32% in liquor. The negative correlation between abundance of Lysinibacillus and contents of EC and urea indicated the effect of L. sphaericus on EC and urea degradation.
Marano, Christopher M.; Workman, Clifford I.; Lyman, Christopher H.; Kramer, Elisse; Hermann, Carol R.; Ma, Yilong; Dhawan, Vijay; Chaly, Thomas; Eidelberg, David; Smith, Gwenn S.
2015-01-01
Evidence exists for late-life depression (LLD) as both a prodrome of and risk factor for Alzheimer’s disease (AD). The underlying neurobiological mechanisms are poorly understood. Impaired peripheral glucose metabolism may explain the association between depression and AD given the connection between type 2 diabetes mellitus with both depression and AD. Positron emission tomography (PET) measures of cerebral glucose metabolism are sensitive to detecting changes in neural circuitry in LLD and AD. Fasting serum glucose (FSG) in non-diabetic young (YC; n=20) and elderly controls (EC; n=12) and LLD patients (n=16) was correlated with PET scans of cerebral glucose metabolism on a voxel-wise basis. The negative correlations were more extensive in EC versus YC and in LLD patients versus EC. Increased FSG correlated with decreased cerebral glucose metabolism in LLD patients to a greater extent than in EC in heteromodal association cortices involved in mood symptoms and cognitive deficits observed in LLD and dementia. Negative correlations in YC were observed in sensory and motor regions. Understanding the neurobiological consequences of diabetes and associated conditions will have substantial public health significance given that this is a modifiable risk factor for which prevention strategies could have an important impact on lowering dementia risk. PMID:24650451
Dong, Ying; Si, Jing-Wen; Li, Wen-Ting; Liang, Li; Zhao, Jian; Zhou, Mei; Li, Dong; Li, Ting
2015-01-01
The aim of this study was to compare the clinicopathological significance of miR-200a/miR-141 and miR-205 expression in endometrioid carcinomas (ECs) versus nonendometrioid carcinomas (NECs) and to assess their correlation with hormone receptor status. miR-200a/miR-141 and miR-205 expression in 154 endometrial cancers was determined by qRT-PCR. The status of estrogen and progesterone receptor (ER/PR) was assessed using immunohistochemistry. miR-200a/miR-141 and miR-205 increased significantly in ECs and in NECs. The expression level of miR-200a was significantly higher in NECs than in ECs (P=0.025). Furthermore, there was a trend that NECs with worse clinicopathological variables had a higher miR-200a expression, while an inverse trend existed in ECs. miR-205 upregulation occurred frequently in NECs without lymph node metastases (P=0.030), whereas such association was not present in ECs. Interestingly, In ECs, miR-200a/miR-141 upregulation occurred frequently in the hormone receptor positive subgroups than the negative subgroups (P<0.05). Similarly, the expression level of miR-205 was higher in the hormone receptor positive subgroups and the association between miR-205 and PR reached statistical significance (P=0.024). In contrast, in NECs, a negative correlation was found between miR-200a/miR-141 and ER or PR status. Meanwhile, in ECs, miR-200a upregulation correlated with prolonged survival in the ER positive subgroup (P=0.046), whereas an inverse trend existed in the ER negative subgroup. Our findings suggest that miR-200a/miR-141 and miR-205 increased significantly in ECs and in NECs. However, they might behave differently in ECs versus NECs. miR-200a/miR-141 and miR-205 might be associated with hormone receptor status in endometrial cancer and may possess prognostic impacts.
Eddy energy and shelf interactions in the Gulf of Mexico
NASA Astrophysics Data System (ADS)
Ohlmann, J. Carter; Niiler, P. Peter; Fox, Chad A.; Leben, Robert R.
2001-02-01
Sea surface height anomaly data from satellite are continuously available for the entire Gulf of Mexico. Surface current velocities derived from these remotely sensed data are compared with surface velocities from drifting buoys. The comparison shows that satellite altimetry does an excellent job resolving gulf eddies over the shelf rise (depths between ˜200 and 2000 m) if the proper length scale is used. Correlations between altimeter- and drifter-derived velocities are statistically significant (r>0.5) when the surface slope is computed over 125 km, indicating that remotely sensed sea surface height anomaly data can be used to aid the understanding of circulation over the shelf rise. Velocity variance over the shelf rise from the altimetry data shows regions of pronounced eddy energy south of the Mississippi outflow, south of the Texas-Louisiana shelf, and in the northwest and northeast corners of the gulf. These are the same locations where surface drifters are most likely to cross the shelf rise, suggesting gulf eddies promote cross-shore flows. This is clearly exemplified with both warm and cold eddies. Finally, the contribution of gulf eddies and wind stress to changes in the mean circulation are compared. Results indicate that the eddy-generated vorticity flux to the mean flow is greater than the contribution from the surface wind stress curl, especially in the region of the Loop current and along the shelf rise base in the western gulf. Future modeling efforts must not neglect the role of eddies in driving gulf circulation over the shelf rise.
NASA Astrophysics Data System (ADS)
Beresh, Steven J.; Wagner, Justin L.; Henfling, John F.; Spillers, Russell W.; Pruett, Brian O. M.
2016-02-01
Pulse-burst Particle Image Velocimetry (PIV) has been employed to acquire time-resolved data at 25 kHz of a supersonic jet exhausting into a subsonic compressible crossflow. Data were acquired along the windward boundary of the jet shear layer and used to identify turbulent eddies as they convect downstream in the far-field of the interaction. Eddies were found to have a tendency to occur in closely spaced counter-rotating pairs and are routinely observed in the PIV movies, but the variable orientation of these pairs makes them difficult to detect statistically. Correlated counter-rotating vortices are more strongly observed to pass by at a larger spacing, both leading and trailing the reference eddy. This indicates the paired nature of the turbulent eddies and the tendency for these pairs to recur at repeatable spacing. Velocity spectra reveal a peak at a frequency consistent with this larger spacing between shear-layer vortices rotating with identical sign. The spatial scale of these vortices appears similar to previous observations of compressible jets in crossflow. Super-sampled velocity spectra to 150 kHz reveal a power-law dependency of -5/3 in the inertial subrange as well as a -1 dependency at lower frequencies attributed to the scales of the dominant shear-layer eddies.
NASA Astrophysics Data System (ADS)
Gwate, O.; Mantel, Sukhmani K.; Palmer, Anthony R.; Gibson, Lesley A.
2016-10-01
Evapotranspiration (ET) is one of the least understood components of the water cycle, particularly in data scarce areas. In a context of climate change, evaluating water vapour fluxes of a particular area is crucial to help understand dynamics in water balance. In data scarce areas, ET modelling becomes vital. The study modelled ET using the Penman-Monteith- Leuning (PML) equation forced by Moderate Resolution Imaging Spectroradiometer (MODIS) leaf area index (LAI) and MODIS albedo with ancillary meteorological data from an automatic weather station. The study area is located on the Albany Thicket (AT) biome of South Africa and the dominant plant species is Portulacaria afra. The biggest challenge to the implementation of the PML is the parameterisation of surface and stomatal conductance. We tested the use of volumetric soil water content (fswc), precipitation and equilibrium evaporation ratio (fzhang) and soil drying after precipitation (f) approaches to account for the fraction (f) of evaporation from the soil. ET from the model was validated using an eddy covariance system (EC). Post processing of eddy covariance data was implement using EddyPro software. The fdrying method performed better with a root mean square observations standard deviation ratio (RSR) of 0.97. The results suggest that modelling ET over the AT vegetation is delicate owing to strong vegetation phenological control of the ET process. The convergent evolution of the vegetation has resulted in high plant available water than the model can detect. It is vital to quantify plant available water in order to improve ET modelling in thicket vegetation.
Speckman, Heather N.; Frank, John M.; Bradford, John B.; Miles, Brianna L.; Massman, William J.; Parton, William J.; Ryan, Michael G.
2015-01-01
Eddy covariance nighttime fluxes are uncertain due to potential measurement biases. Many studies report eddy covariance nighttime flux lower than flux from extrapolated chamber measurements, despite corrections for low turbulence. We compared eddy covariance and chamber estimates of ecosystem respiration at the GLEES Ameriflux site over seven growing seasons under high turbulence (summer night mean friction velocity (u*) = 0.7 m s−1), during which bark beetles killed or infested 85% of the aboveground respiring biomass. Chamber-based estimates of ecosystem respiration during the growth season, developed from foliage, wood and soil CO2 efflux measurements, declined 35% after 85% of the forest basal area had been killed or impaired by bark beetles (from 7.1 ±0.22 μmol m−2 s−1 in 2005 to 4.6 ±0.16 μmol m−2 s−1 in 2011). Soil efflux remained at ~3.3 μmol m−2 s−1 throughout the mortality, while the loss of live wood and foliage and their respiration drove the decline of the chamber estimate. Eddy covariance estimates of fluxes at night remained constant over the same period, ~3.0 μmol m−2 s−1 for both 2005 (intact forest) and 2011 (85% basal area killed or impaired). Eddy covariance fluxes were lower than chamber estimates of ecosystem respiration (60% lower in 2005, and 32% in 2011), but the mean night estimates from the two techniques were correlated within a year (r2 from 0.18-0.60). The difference between the two techniques was not the result of inadequate turbulence, because the results were robust to a u* filter of > 0.7 m s−1. The decline in the average seasonal difference between the two techniques was strongly correlated with overstory leaf area (r2=0.92). The discrepancy between methods of respiration estimation should be resolved to have confidence in ecosystem carbon flux estimates.
NASA Technical Reports Server (NTRS)
Luneva, M. V.; Clayson, C. A.; Dubovikov, Mikhail
2015-01-01
In eddy resolving simulations, we test a mixed layer mesoscale parametrisation, developed recently by Canuto and Dubovikov [Ocean Model., 2011, 39, 200-207]. With no adjustable parameters, the parametrisation yields the horizontal and vertical mesoscale fluxes in terms of coarse-resolution fields and eddy kinetic energy (EKE). We compare terms of the parametrisation diagnosed from coarse-grained fields with the eddy mesoscale fluxes diagnosed directly from the high resolution model. An expression for the EKE in terms of mean fields has also been found to get a closed parametrisation in terms of the mean fields only. In 40 numerical experiments we simulated two types of flows: idealised flows driven by baroclinic instabilities only, and more realistic flows, driven by wind and surface fluxes as well as by inflow-outflow. The diagnosed quasi-instantaneous horizontal and vertical mesoscale buoyancy fluxes (averaged over 1-2 degrees and 10 days) demonstrate a strong scatter typical for turbulent flows, however, the fluxes are positively correlated with the parametrisation with higher (0.5-0.74) correlations at the experiments with larger baroclinic radius Rossby. After being averaged over 3-4 months, diffusivities diagnosed from the eddy resolving simulations are consistent with the parametrisation for a broad range of parameters. Diagnosed vertical mesoscale fluxes restratify mixed layer and are in a good agreement with the parametrisation unless vertical turbulent mixing in the upper layer becomes strong enough in comparison with mesoscale advection. In the latter case, numerical simulations demonstrate that the deviation of the fluxes from the parametrisation is controlled by dimensionless parameter estimating the ratio of vertical turbulent mixing term to mesoscale advection. An analysis using a modified omega-equation reveals that the effects of the vertical mixing of vorticity is responsible for the two-three fold amplification of vertical mesoscale flux. Possible physical mechanisms, responsible for the amplification of vertical mesoscale flux are discussed.
Samuel, M O; Wanmi, N; Usende, L
2016-01-01
This study evaluated 30 skulls of the grey mongoose divided into three age-groups (6 pups, 10 juveniles and 14 adults) for skull shape variability determination. Specific geometric shapes were drawn from defined points. Angular geometric measurements of shapes derived from rostro-dorsal and rostro-lateral parts of the skull included; orbital angles (with and without the mandible), comprising of viscero-cranium, skull and orbital index that was calculated to evaluate the correlations, if any, with angles measured. It was observed that orbital height and width became higher with age; there was stronger correlation in this regard between pups and juveniles compared with juveniles and adults. There is a reduction (narrowing) in BrEcEc, BrEcN, EcPEc, EcEnN and NwNNw angles with concomitant enlargement of BrEcP, BrEcN, EcNEc, EnNEn, EcNNw and EnNP with age. The decline in the skull index shows a decrease in rate of skull width growth relative to rostro-facial length and demonstrates non-proportionality to zygoma bowing. Significantly varied orbital parameters include the inter-canthii distance and implications of certain significant variables observed in some geometric orbital measurements of the tropical mongoose (Herpestes ichneumon). The survey hypothesizes the observations follow typical carnivoran phylogenic affinity, differentiates this species from similar herpestid versions and is an estimation of functional morphology with respect to bite size. It is further suggested to contribute to visual acuity in timing of bite delivery as well an adaptation in prey summarisation. This study will serve as baseline information in herpestid cranial investigations. Such facial features are useful in population studies, species identification, eco-migrant species surveillance and species ontogenic evolution.
NASA Astrophysics Data System (ADS)
Chen, L. A.; Doddridge, B. G.; Doddridge, B. G.; Dickerson, R. R.; Dickerson, R. R.
2001-05-01
As part of Maryland Aerosol Research and Characterization (MARCH-Atlantic) study, a long-term monitoring of ambient elemental and organic carbon (EC and OC) aerosols has been made at Fort Meade, MD (39.16° N 76.51° W; elevation 46 m MSL), a suburban site within the Baltimore-Washington (B-W) corridor, since July 1999. 24-hr average EC and OC are measured every day during the season-representative months (July 1999, October 1999, January 2000, April 2000 and July 2000). Carbon monoxide (CO) was also measured nearly continuously over the period. Strong correlation between EC and CO (r = 0.7 ~ 0.9) in every month suggests common or proximate sources, likely traffic emissions. The EC versus CO slope, however, varies in different seasons and is found to increase nonlinearly with the ambient temperature. EC source strength may peak in summer. OC shows strong correlation with EC (r ~ 0.95) only in winter, suggesting that OC is also of the same primary sources during wintertime. The Interagency Monitoring of Protected Visual Environments (IMPROVE) network has been measuring EC and OC around the United States since 1988. The FME data during July 1999 are also compared with simultaneous measurements at nearby IMPROVE sites, showing B-W corridor could be a major contributor to the carbonaceous aerosols in the Mid-Atlantic region. A decreasing trend of EC level is found in three IMPROVE sites in this region. This actually agrees with the decreasing trend of CO observed previously at Big Meadow, Shenandoah National Park if CO and EC are both influenced by traffic emissions.
Exposure of Trucking Company Workers to Particulate Matter during the Winter
Lee, Byeong-Kyu; Smith, Thomas J.; Garshick, Eric; Natkin, Jonathan; Reaser, Paul; Lane, Kevin; Lee, Haengah Kim
2006-01-01
This study analyzed the workplace area concentrations and the personal exposure concentrations to fine particulate (PM2.5), elemental carbon (EC), and organic carbon (OC) measured during the winter period in trucking companies. The averaged personal exposure concentrations at breathing zones of workers are much greater than those of the microenvironment concentrations. The highest difference between the area (microenvironment) and personal exposure concentrations was in the PM2.5 concentrations followed by the OC concentrations. The area concentrations of PM2.5, EC, and OC at a large terminal were higher than those at a small one. The highest area concentrations of PM2.5, EC, and OC were observed in the shop areas followed by pick-up and delivery (P&D) areas. The area concentrations and personal exposure to PM2.5, EC, and OC in the shop and P&D areas which are highly affected by diesel engine exhaust emissions were much higher than those in the docks which are significantly affected by liquefied petroleum gas (LPG) engine exhaust emissions. The highest EC fraction to the total carbon (EC + OC) concentrations was observed in the shops, while the lowest one was identified in the offices. The personal exposure of the smoking workers to PM2.5 and OC was much higher than that of the non-smoking workers. However, the smoking might not significantly contribute to the personal exposure to EC. There were significant correlations between the PM2.5 and OC concentrations in both the area and personal exposure concentrations. However, significant correlations between the PM2.5 and EC concentrations and between the OC and EC concentrations were not identified. PMID:15913707
Neural field theory of perceptual echo and implications for estimating brain connectivity
NASA Astrophysics Data System (ADS)
Robinson, P. A.; Pagès, J. C.; Gabay, N. C.; Babaie, T.; Mukta, K. N.
2018-04-01
Neural field theory is used to predict and analyze the phenomenon of perceptual echo in which random input stimuli at one location are correlated with electroencephalographic responses at other locations. It is shown that this echo correlation (EC) yields an estimate of the transfer function from the stimulated point to other locations. Modal analysis then explains the observed spatiotemporal structure of visually driven EC and the dominance of the alpha frequency; two eigenmodes of similar amplitude dominate the response, leading to temporal beating and a line of low correlation that runs from the crown of the head toward the ears. These effects result from mode splitting and symmetry breaking caused by interhemispheric coupling and cortical folding. It is shown how eigenmodes obtained from functional magnetic resonance imaging experiments can be combined with temporal dynamics from EC or other evoked responses to estimate the spatiotemporal transfer function between any two points and hence their effective connectivity.
NASA Astrophysics Data System (ADS)
Toda, M.; Yokozawa, M.; Richardson, A. D.; Kohyama, T.
2011-12-01
The effects of wind disturbance on interannual variability in ecosystem CO2 exchange have been assessed in two forests in northern Japan, i.e., a young, even-aged, monocultured, deciduous forest and an uneven-aged mixed forest of evergreen and deciduous trees, including some over 200 years old using eddy covariance (EC) measurements during 2004-2008. The EC measurements have indicated that photosynthetic recovery of trees after a huge typhoon occurred during early September in 2004 activated annual carbon uptake of both forests due to changes in physiological response of tree leaves during their growth stages. However, little have been resolved about what biotic and abiotic factors regulated interannual variability in heat, water and carbon exchange between an atmosphere and forests. In recent years, an inverse modeling analysis has been utilized as a powerful tool to estimate biotic and abiotic parameters that might affect heat, water and CO2 exchange between the atmosphere and forest of a parsimonious physiologically based model. We conducted the Bayesian inverse model analysis for the model with the EC measurements. The preliminary result showed that the above model-derived NEE values were consistent with observed ones on the hourly basis with optimized parameters by Baysian inversion. In the presentation, we would examine interannual variability in biotic and abiotic parameters related to heat, water and carbon exchange between the atmosphere and forests after disturbance by typhoon.
Evaluating Micrometeorological Estimates of Groundwater Discharge from Great Basin Desert Playas.
Jackson, Tracie R; Halford, Keith J; Gardner, Philip M
2018-03-06
Groundwater availability studies in the arid southwestern United States traditionally have assumed that groundwater discharge by evapotranspiration (ET g ) from desert playas is a significant component of the groundwater budget. However, desert playa ET g rates are poorly constrained by Bowen ratio energy budget (BREB) and eddy-covariance (EC) micrometeorological measurement approaches. Best attempts by previous studies to constrain ET g from desert playas have resulted in ET g rates that are within the measurement error of micrometeorological approaches. This study uses numerical models to further constrain desert playa ET g rates that are within the measurement error of BREB and EC approaches, and to evaluate the effect of hydraulic properties and salinity-based groundwater density contrasts on desert playa ET g rates. Numerical models simulated ET g rates from desert playas in Death Valley, California and Dixie Valley, Nevada. Results indicate that actual ET g rates from desert playas are significantly below the uncertainty thresholds of BREB- and EC-based micrometeorological measurements. Discharge from desert playas likely contributes less than 2% of total groundwater discharge from Dixie and Death Valleys, which suggests discharge from desert playas also is negligible in other basins. Simulation results also show that ET g from desert playas primarily is limited by differences in hydraulic properties between alluvial fan and playa sediments and, to a lesser extent, by salinity-based groundwater density contrasts. Published 2018. This article is a U.S. Government work and is in the public domain in the USA.
Abdou, Asmaa Gaber; Wahed, Moshira Mohammed Abdel; Kassem, Hend Abdou
2016-01-01
Introduction Hypoxia-Inducible Factor 1α (HIF-1α) is one of the major adaptive responses to hypoxia, regulating the activity of glucose transporter -1 (GLUT-1), responsible for glucose uptake. Aim To evaluate the immunohistochemical expression of both HIF-1α and GLUT-1 in type I and II endometrial carcinoma and their correlation with the available clinicopathologic variables in each type. Materials and Methods A retrospective study was conducted on archival blocks diagnosed from pathology department between April 2010 and August 2014 included 9 cases of atypical hyperplasia and 67 cases of endometrial carcinoma. Evaluation of both HIF-1α and GLUT-1 expression using standard immunohistochemical techniques performed on cut sections from selected paraffin embedded blocks. Statistical Analysis Descriptive analysis of the variables and statistical significances were calculated by non-parametric chi-square test using the Statistical Package for the Social Sciences version 12.0 (SPSS). Results HIF-1α was expressed in epithelial (88.9%, 52.2%, 61.2% and 50%) and stromal (33.3%, 74.6%. 71.4% and 83.3%) components of hyperplasia, total cases of EC, type I and II EC, respectively. GLUT-1 was expressed in the epithelial component of 88.9%, 98.5%, 98% and 100% of hyperplasia, total EC cases, type I and II EC, respectively. The necrosis related pattern of epithelial HIF-1α expression was in favour of type II (p=0.018) and grade III (p=0.038). HIF-1α H-score was associated with high apoptosis in both type I and total cases of EC (p=0.04). GLUT-1 H-score was negatively correlated with apoptotic count (p=0.04) and associated with high grade (p=0.003) and advanced stage in total EC (p=0.004). GLUT-1 H-score was correlated with the pattern of HIF-1α staining in all cases of EC (p= 0.04). Conclusion The role of HIF-1α in epithelial cells may differ from that of stromal cells in EC; however they augment the expression of each other supporting the crosstalk between them. The stepwise increase in H- score of GLUT-1 in the studied cases implies its potential role in carcinogenesis of EC. HIF-1α may promote GLUT-1 expression in EC especially surrounding areas of necrosis. The differences between type I and type II EC regarding HIF-1α and GLUT-1 expression may confirm the differences in their aetiopathogenesis. PMID:27437226
Al-Sharaky, Dalia Rifaat; Abdou, Asmaa Gaber; Wahed, Moshira Mohammed Abdel; Kassem, Hend Abdou
2016-05-01
Hypoxia-Inducible Factor 1α (HIF-1α) is one of the major adaptive responses to hypoxia, regulating the activity of glucose transporter -1 (GLUT-1), responsible for glucose uptake. To evaluate the immunohistochemical expression of both HIF-1α and GLUT-1 in type I and II endometrial carcinoma and their correlation with the available clinicopathologic variables in each type. A retrospective study was conducted on archival blocks diagnosed from pathology department between April 2010 and August 2014 included 9 cases of atypical hyperplasia and 67 cases of endometrial carcinoma. Evaluation of both HIF-1α and GLUT-1 expression using standard immunohistochemical techniques performed on cut sections from selected paraffin embedded blocks. Descriptive analysis of the variables and statistical significances were calculated by non-parametric chi-square test using the Statistical Package for the Social Sciences version 12.0 (SPSS). HIF-1α was expressed in epithelial (88.9%, 52.2%, 61.2% and 50%) and stromal (33.3%, 74.6%. 71.4% and 83.3%) components of hyperplasia, total cases of EC, type I and II EC, respectively. GLUT-1 was expressed in the epithelial component of 88.9%, 98.5%, 98% and 100% of hyperplasia, total EC cases, type I and II EC, respectively. The necrosis related pattern of epithelial HIF-1α expression was in favour of type II (p=0.018) and grade III (p=0.038). HIF-1α H-score was associated with high apoptosis in both type I and total cases of EC (p=0.04). GLUT-1 H-score was negatively correlated with apoptotic count (p=0.04) and associated with high grade (p=0.003) and advanced stage in total EC (p=0.004). GLUT-1 H-score was correlated with the pattern of HIF-1α staining in all cases of EC (p= 0.04). The role of HIF-1α in epithelial cells may differ from that of stromal cells in EC; however they augment the expression of each other supporting the crosstalk between them. The stepwise increase in H- score of GLUT-1 in the studied cases implies its potential role in carcinogenesis of EC. HIF-1α may promote GLUT-1 expression in EC especially surrounding areas of necrosis. The differences between type I and type II EC regarding HIF-1α and GLUT-1 expression may confirm the differences in their aetiopathogenesis.
Modeling light use efficiency in a subtropical mangrove forest equipped with CO2 eddy covariance
Barr, J.G.; Engel, V.; Fuentes, J.D.; Fuller, D.O.; Kwon, H.
2013-01-01
Despite the importance of mangrove ecosystems in the global carbon budget, the relationships between environmental drivers and carbon dynamics in these forests remain poorly understood. This limited understanding is partly a result of the challenges associated with in situ flux studies. Tower-based CO2 eddy covariance (EC) systems are installed in only a few mangrove forests worldwide, and the longest EC record from the Florida Everglades contains less than 9 years of observations. A primary goal of the present study was to develop a methodology to estimate canopy-scale photosynthetic light use efficiency in this forest. These tower-based observations represent a basis for associating CO2 fluxes with canopy light use properties, and thus provide the means for utilizing satellite-based reflectance data for larger scale investigations. We present a model for mangrove canopy light use efficiency utilizing the enhanced green vegetation index (EVI) derived from the Moderate Resolution Imaging Spectroradiometer (MODIS) that is capable of predicting changes in mangrove forest CO2 fluxes caused by a hurricane disturbance and changes in regional environmental conditions, including temperature and salinity. Model parameters are solved for in a Bayesian framework. The model structure requires estimates of ecosystem respiration (RE), and we present the first ever tower-based estimates of mangrove forest RE derived from nighttime CO2 fluxes. Our investigation is also the first to show the effects of salinity on mangrove forest CO2 uptake, which declines 5% per each 10 parts per thousand (ppt) increase in salinity. Light use efficiency in this forest declines with increasing daily photosynthetic active radiation, which is an important departure from the assumption of constant light use efficiency typically applied in satellite-driven models. The model developed here provides a framework for estimating CO2 uptake by these forests from reflectance data and information about environmental conditions.
NASA Astrophysics Data System (ADS)
Moreaux, V.; Ceschia, E.; Delpierre, N.; Dufrêne, E.; Joffre, R.; Klumpp, K.; Berveiller, D.; Loustau, D.; Limousin, J. M.; Ourcival, J. M.; Brut, A.; Darsonville, O.; Lafont, S.; Piquemal, K.; Longdoz, B.
2017-12-01
The attribution of the significant inter-annual variability of long lived greenhouse gas (GHG) fluxes, between edaphic, meteorological variables and ecosystem management parameters - independently or in interaction, evolving as a long term drift or as extreme events - remains uncertain. Our research aims to quantify the potential impact of climatic drifts or anthropogenic and meteorological events on ecosystem-atmosphere exchanges of French sites by analyzing the long series (at least continuous 9 years, between 1996 and 2015) of eddy covariance (EC) fluxes. We firstly performed a homogeneously repost-processing of the raw EC data across 5 sites: three forest ecosystems (deciduous broad-leaved FR-Fon, evergreen broadleaved FR-Pue, and evergreen coniferous FR-Br), one extensive grassland (FR-Lq2) and one cropland (FR-Aur). These data, in terms of net ecosystem exchanges (NEE), gross primary production (GPP) and ecosystem respiration (Reco) were put together with the corresponding climatic and edaphic data and with the carbon stock inventory for an homogeneous statistical analysis and comparative interpretations. The standard protocol, excluding any Nakai's corrections, helped to reduce the influence of the methodology and experimental design on the temporal and spatial variability. The methodology adopted finally used 35% on average of flux data for all sites. Based on the first analysis of reprocessed data from the forests, no significant long term evolution of NEE, Reco and GPP through the studied periods despite [CO2] increase and long term change observed in environmental parameters. Combining all years, a respiration limitation at high air temperature was observed on the forest sites, with a LAI dependency for deciduous ecosystems, and REW dependency for evergreen southern sites. A dominant effect of air vapor stress, compared to edaphic stress was observed on GPP response to PPFD in the deciduous northern forest, significantly decreasing with VPD increase.
Peng, Yudong; Meng, Kai; Jiang, Lili; Zhong, Yucheng; Yang, Yong; Lan, Yin
2017-01-01
Endothelial cells’ (EC) injury is a major step for the pathological progression of atherosclerosis. Recent study demonstrated that thymic stromal lymphopoietin (TSLP) exerts a protective role in atherosclerosis. However, the effect of TSLP and the exact molecular mechanism involved in EC remains unknown. In the present study, we found that long noncoding RNA (lncRNA) HOTAIR was much lower in EC from atherosclerotic plaque. Functional assays showed that HOTAIR facilitated cell proliferation and migration, and suppressed apoptosis in EC. Moreover, we demonstrated that TSLP functions upstream of HOTAIR. We found that serum level of TSLP was decreased in atherosclerosis patients and serum TSLP level positively correlated with HOTAIR expression in EC. Further investigation demonstrated that TSLP activated HOTAIR transcription through PI3K/AKT-IRF1 pathway and then regulates the EC proliferation and migration. TSLP-HOTAIR axis also plays a protective role in low-density lipoprotein (ox-LDL)-induced EC injury. Taken together, TSLP-HOTAIR may be a potential therapy for EC dysfunction in atherosclerosis. PMID:28615347
Evaluation of home allergen sampling devices.
Sercombe, J K; Liu-Brennan, D; Garcia, M L; Tovey, E R
2005-04-01
Simple, inexpensive methods of sampling from allergen reservoirs are necessary for large-scale studies or low-cost householder-operated allergen measurement. We tested two commercial devices: the Indoor Biotechnologies Mitest Dust Collector and the Drager Bio-Check Allergen Control; two devices of our own design: the Electrostatic Cloth Sampler (ECS) and the Press Tape Sampler (PTS); and a Vacuum Sampler as used in many allergen studies (our Reference Method). Devices were used to collect dust mite allergen samples from 16 domestic carpets. Results were examined for correlations between the sampling methods. With mite allergen concentration expressed as microg/g, the Mitest, the ECS and the PTS correlated with the Reference Method but not with each other. When mite allergen concentration was expressed as microg/m2 the Mitest and the ECS correlated with the Reference Method but the PTS did not. In the high allergen conditions of this study, the Drager Bio-Check did not relate to any methods. The Mitest Dust Collector, the ECS and the PTS show performance consistent with the Reference Method. Many techniques can be used to collect dust mite allergen samples. More investigation is needed to prove any method as superior for estimating allergen exposure.
NASA Astrophysics Data System (ADS)
Zimovets, I. V.; Sharykin, I. N.; Wang, R.; Liu, Y. D.; Kosovichev, A. G.
2017-12-01
It is believed that solar flares are a result of release of free magnetic energy contained in electric currents (ECs) flowing in active regions (ARs). However, there are still debates whether the primary energy release and acceleration of electrons take place in coronal current sheets or in chromospheric footpoints of current-carrying magnetic flux tubes (loops). We present results of an observational statistical study of spatial relationship between hard X-ray (HXR; EHXR≥50keV) footpoint sources detected by RHESSI and vertical photospheric ECs calculated using vector magnetograms obtained from the SDO/HMI data. We found that for a sample of 47 flares (from C3.0 to X3.1 class) observed on the solar disk by both instruments in 2010-2016, at least one HXR source was in a region of strong (within 20% of the maximum EC density in the corresponding ARs) vertical ECs having the form of a ribbon (79%) or an island (21%). The total vertical ECs in such HXR sources are in the range of 1010-1013 A. The EC density is in the range of 0.01-1.0 A/m2. We found no correlation between intensity of the HXR sources and the EC density. By comparing pre-flare and post-flare EC maps we did not find evidences of significant dissipation of vertical ECs in the regions corresponding to the HXR sources. In some cases, we found amplification of ECs during flares. We discuss effects of sensitivity and angular resolution of RHESSI and SDO/HMI. In general, the results indicate that there is a link between the flare HXR footpoint sources and enhanced vertical ECs in the photosphere. However, the results do not support a concept of electron acceleration by the electric field excited in footpoints of current-carrying loops due to some (e.g. Rayleigh-Taylor) instabilities (Zaitsev et al., 2016), since strong correlation between the HXR intensity and the EC density is expected in such concept.
Duell, L. F. W.
1988-01-01
In Owens Valley, evapotranspiration (ET) is one of the largest components of outflow in the hydrologic budget and the least understood. ET estimates for December 1983 through October 1985 were made for seven representative locations selected on the basis of geohydrology and the characteristics of phreatophytic alkaline scrub and meadow communities. The Bowen-ratio, eddy-correlation, and Penman-combination methods were used to estimate ET. The results of the analyses appear satisfactory when compared to other estimates of ET. Results by the eddy-correlation method are for a direct and a residual latent-heat flux that is based on sensible-heat flux and energy budget measurements. Penman-combination potential ET estimates were determined to be unusable because they overestimated actual ET. Modification in the psychrometer constant of this method to account for differences between heat-diffusion resistance and vapor-diffusion resistance permitted actual ET to be estimated. The methods may be used for studies in similar semiarid and arid rangeland areas in the Western United States. Meteorological data for three field sites are included in the appendix. Simple linear regression analysis indicates that ET estimates are correlated to air temperature, vapor-density deficit, and net radiation. Estimates of annual ET range from 300 mm at a low-density scrub site to 1,100 mm at a high-density meadow site. The monthly percentage of annual ET was determined to be similar for all sites studied. (Author 's abstract)
Technical note: Using distributed temperature sensing for Bowen ratio evaporation measurements
NASA Astrophysics Data System (ADS)
Schilperoort, Bart; Coenders-Gerrits, Miriam; Luxemburg, Willem; Jiménez Rodríguez, César; Cisneros Vaca, César; Savenije, Hubert
2018-01-01
Rapid improvements in the precision and spatial resolution of distributed temperature sensing (DTS) technology now allow its use in hydrological and atmospheric sciences. Introduced by ) is the use of DTS for measuring the Bowen ratio (BR-DTS), to estimate the sensible and latent heat flux. The Bowen ratio is derived from DTS-measured vertical profiles of the air temperature and wet-bulb temperature. However, in previous research the measured temperatures were not validated, and the cables were not shielded from solar radiation. Additionally, the BR-DTS method has not been tested above a forest before, where temperature gradients are small and energy storage in the air column becomes important. In this paper the accuracy of the wet-bulb and air temperature measurements of the DTS are verified, and the resulting Bowen ratio and heat fluxes are compared to eddy covariance data. The performance of BR-DTS was tested on a 46 m high tower in a mixed forest in the centre of the Netherlands in August 2016. The average tree height is 26 to 30 m, and the temperatures are measured below, in, and above the canopy. Using the vertical temperature profiles the storage of latent and sensible heat in the air column was calculated. We found a significant effect of solar radiation on the temperature measurements, leading to a deviation of up to 3 K. By installing screens, the error caused by sunlight is reduced to under 1 K. Wind speed seems to have a minimal effect on the measured wet-bulb temperature, both below and above the canopy. After a simple quality control, the Bowen ratio measured by DTS correlates well with eddy covariance (EC) estimates (r2 = 0.59). The average energy balance closure between BR-DTS and EC is good, with a mean underestimation of 3.4 W m-2 by the BR-DTS method. However, during daytime the BR-DTS method overestimates the available energy, and during night-time the BR-DTS method estimates the available energy to be more negative. This difference could be related to the biomass heat storage, which is neglected in this study. The BR-DTS method overestimates the latent heat flux on average by 18.7 W m-2, with RMSE = 90 W m-2. The sensible heat flux is underestimated on average by 10.6 W m-2, with RMSE = 76 W m-2. Estimates of the BR-DTS can be improved once the uncertainties in the energy balance are reduced. However, applying, for example, Monin-Obukhov similarity theory could provide independent estimates for the sensible heat flux. This would make the determination of the highly uncertain and difficult to determine net available energy redundant.
Grazing Effects on Water Use Efficiency on a Mongolian Desert Steppe
NASA Astrophysics Data System (ADS)
Shao, C.; Chen, J.; Li, L.; John, R.; Ouyang, Z.
2015-12-01
Ecosystem-level water use efficiency (WUE), defined as the ratio of gross primary production (GPP) to evapotranspiration (ET), was assessed by continuous and simultaneous direct eddy-covariance (EC) measurements of carbon and water fluxes on adjacent pastures of grazed (DS) and ungrazed steppes (FS) in the Mongolia Plateau for a two-year period from 2010 to 2012. We found that the WUE was well positively linear correlated (r2=0.90) with the GEP both in the DS and FS. Due to our desert steppe was very sensitive to the precipitation, WUE was co-varied with the precipitation. WUE increased with the GEP increase under good water conditions, when the GEP reached its maximal value (DS: 3 g C m-2, FS: 2 g C m-2), the WUE was suppressed and kept a stable value during the peak growing season. Both GEP and WUE was near zero when the soil moisture was lower. We also found that the WUE was negatively correlated with ET. The WUE was higher in GS than that in FS. The mean seasonal WUE was 0.93 in GS and 0.54 g C kg-1 H2O in FS, with a peak monthly WUE of 1.32 in GS and 0.73 g C kg-1 H2O in FS, respectively. The difference between GS and FS mainly caused by that the ET was changed with the GEP during the entire growing season. This suggests the importance of both plant population dynamics and water statues should be considered in WUE studies.
Correction of eddy current distortions in high angular resolution diffusion imaging.
Zhuang, Jiancheng; Lu, Zhong-Lin; Vidal, Christine Bouteiller; Damasio, Hanna
2013-06-01
To correct distortions caused by eddy currents induced by large diffusion gradients during high angular resolution diffusion imaging without any auxiliary reference scans. Image distortion parameters were obtained by image coregistration, performed only between diffusion-weighted images with close diffusion gradient orientations. A linear model that describes distortion parameters (translation, scale, and shear) as a function of diffusion gradient directions was numerically computed to allow individualized distortion correction for every diffusion-weighted image. The assumptions of the algorithm were successfully verified in a series of experiments on phantom and human scans. Application of the proposed algorithm in high angular resolution diffusion images markedly reduced eddy current distortions when compared to results obtained with previously published methods. The method can correct eddy current artifacts in the high angular resolution diffusion images, and it avoids the problematic procedure of cross-correlating images with significantly different contrasts resulting from very different gradient orientations or strengths. Copyright © 2012 Wiley Periodicals, Inc.
DOE Office of Scientific and Technical Information (OSTI.GOV)
Grant, R. F.; Mekonnen, Z. A.; Riley, W. J.
Differences of surface elevation in arctic polygonal landforms cause spatial variation in soil water contents (θ), active layer depths (ALD), and thereby in CO 2 and CH 4 exchange. In this paper, we test hypotheses in ecosys for topographic controls on CO 2 and CH 4 exchange in trough, rim, and center features of low- and flat-centered polygons (LCP and FCP) against chamber and eddy covariance (EC) measurements during 2013 at Barrow, Alaska. Larger CO 2 influxes and CH 4 effluxes were measured with chambers and modeled with ecosys in LCPs than in FCPs and in lower features (troughs) thanmore » in higher (rims) within LCPs and FCPs. Spatially aggregated CO 2 and CH 4 fluxes from ecosys were significantly correlated with EC flux measurements. Lower features were modeled as C sinks (52–56 g C m -2 yr -1) and CH 4 sources (4–6 g C m -2 yr -1), and higher features as near C neutral (-2–15 g C m -2 yr -1) and CH 4 neutral (0.0–0.1 g C m -2 yr -1). Much of the spatial and temporal variations in CO 2 and CH 4 fluxes were modeled from topographic effects on water and snow movement and thereby on θ, ALD, and soil O 2 concentrations. Model results forced with meteorological data from 1981 to 2015 indicated increasing net primary productivity in higher features and CH 4 emissions in some lower and higher features since 2008, attributed mostly to recent rises in precipitation. Finally, small-scale variation in surface elevation causes large spatial variation of greenhouse gas (GHG) exchanges and therefore should be considered in estimates of GHG exchange in polygonal landscapes.« less
How to determine the GHG budget of a pasture field with grazing animals
NASA Astrophysics Data System (ADS)
Ammann, Christof; Neftel, Albrecht; Felber, Raphael
2016-04-01
Up to now the scientific investigation and description of the agriculture related greenhouse gas (GHG) exchange has been largely separated into (i) direct animal related and (ii) ecosystem area related processes and measurement methods. An overlap of the two usually separated topics occurs for grazed pastures, where direct animal and pasture area emissions are relevant. In the present study eddy covariance (EC) flux measurements on the field scale were combined with a source location attribution (footprint) model and with GPS position measurements of the individual animals. The experiment was performed on a pasture field in Switzerland under a rotational full grazing regime with dairy cows. The exchange fluxes of CH4, CO2, and N2O were measured simultaneously over the entire year. The observed CH4 emission fluxes correlated well with the presence of cows in the flux footprint. When converted to average emission per cow, the results agreed with published values from respiration chamber experiments with similar cows. For CO2 a sophisticated partitioning algorithm was applied to separate the pasture and animal contributions, because both were in the same order of magnitude. The N2O exchange fully attributable to the pasture soil showed considerable and continuous emissions through the entire seasonal course mainly modulated by soil moisture and temperature. The resulting GHG budget shows that the largest GHG effect of the pasture system was due to enteric CH4 emissions followed by soil N2O emissions, but that the carbon storage change was affected by a much larger uncertainty. The results demonstrate that the EC technique in combination with animal position information allows to consistently quantify the exchange of all three GHG on the pasture and to adequately distinguish between direct animal and diffuse area sources (and sinks). Yet questions concerning a standardized attribution of animal related emissions to the pasture GHG budget still need to be resolved.
Grant, R. F.; Mekonnen, Z. A.; Riley, W. J.; ...
2017-11-17
Differences of surface elevation in arctic polygonal landforms cause spatial variation in soil water contents (θ), active layer depths (ALD), and thereby in CO 2 and CH 4 exchange. In this paper, we test hypotheses in ecosys for topographic controls on CO 2 and CH 4 exchange in trough, rim, and center features of low- and flat-centered polygons (LCP and FCP) against chamber and eddy covariance (EC) measurements during 2013 at Barrow, Alaska. Larger CO 2 influxes and CH 4 effluxes were measured with chambers and modeled with ecosys in LCPs than in FCPs and in lower features (troughs) thanmore » in higher (rims) within LCPs and FCPs. Spatially aggregated CO 2 and CH 4 fluxes from ecosys were significantly correlated with EC flux measurements. Lower features were modeled as C sinks (52–56 g C m -2 yr -1) and CH 4 sources (4–6 g C m -2 yr -1), and higher features as near C neutral (-2–15 g C m -2 yr -1) and CH 4 neutral (0.0–0.1 g C m -2 yr -1). Much of the spatial and temporal variations in CO 2 and CH 4 fluxes were modeled from topographic effects on water and snow movement and thereby on θ, ALD, and soil O 2 concentrations. Model results forced with meteorological data from 1981 to 2015 indicated increasing net primary productivity in higher features and CH 4 emissions in some lower and higher features since 2008, attributed mostly to recent rises in precipitation. Finally, small-scale variation in surface elevation causes large spatial variation of greenhouse gas (GHG) exchanges and therefore should be considered in estimates of GHG exchange in polygonal landscapes.« less
Berghofer, Gerlinde; Castille, Dorothy M; Link, Bruce
2011-08-01
This article describes the development and psychometric assessment of the Evaluation of Client Services (ECS) measure of treatment satisfaction for people with chronic mental illnesses in community treatment settings. The ECS, a 20-item instrument, was validated in a sample of 184 individuals receiving outpatient mental health treatment in New York City. The four dimensions of the ECS, (1) treatment management and treatment outcome, (2) treatment relationship, (3) communication and information exchange, and (4) reachability of treatment facilities are internally consistent and stable over time. Analyses also show that the ECS is a valid indicator of satisfaction with mental health services which meaningfully correlates with quality of life and another measure of treatment satisfaction. The ECS is a brief and easy to understand treatment satisfaction tool with good psychometric properties.
NASA Astrophysics Data System (ADS)
Hobbins, M.; McEvoy, D.; Huntington, J. L.; Wood, A. W.; Morton, C.; Verdin, J. P.
2015-12-01
We have developed a physically based, multi-scalar drought index—the Evaporative Demand Drought Index (EDDI)—to improve treatment of evaporative dynamics in drought monitoring. Existing popular drought indices—such as the Palmer Drought Severity Index that informs much of the US Drought Monitor (USDM)—have primarily relyied on precipitation and temperature (T) to represent hydroclimatic anomalies, leaving evaporative demand (E0) most often derived from poorly performing T-based parameterizations then used to derive actual evapotranspiration (ET) from LSMs. Instead, EDDI leverages the inter-relations of E0 and ET, measuring E0's physical response to surface drying anomalies due to two distinct land surface/atmosphere interactions: (i) in sustained drought, limited moisture availability forces E0 and ET into a complementary relation, whereby ET declines as E0 increases; and (ii) in "flash" droughts, E0 increases due to increasing advection or radiation. E0's rise in response to both drought types suggests EDDI's robustness as a monitor and leading indicator of drought. To drive EDDI, we use for E0 daily reference ET from the ASCE Standardized Reference ET equation forced by North American Land Data Assimilation System drivers. EDDI is derived by aggregating E0 anomalies from its long-term mean across a period of interest and normalizing them to a Z-score. Positive EDDI indicates drier than normal conditions (and so drought). We use the current historic California drought as a test-case in which to examine EDDI's performance in monitoring agricultural and hydrologic drought. We observe drought development and decompose the behavior of drought's evaporative drivers during in-drought intensification periods and wetting events. EDDI's performance as a drought leading indicator with respect to the USDM is tested in important agricultural regions. Comparing streamflow from several USGS gauges in the Sierra Nevada to EDDI, we find that EDDI tracks most major hydrologic droughts, with correlations to water-year streamflow that are highest at the 9- to 12-month aggregation periods, and during the summer. EDDI shows significant promise as a leading indicator of drought, thereby providing a valuable planning window for growers and water resource managers.
WhiteRef: a new tower-based hyperspectral system for continuous reflectance measurements.
Sakowska, Karolina; Gianelle, Damiano; Zaldei, Alessandro; MacArthur, Alasdair; Carotenuto, Federico; Miglietta, Franco; Zampedri, Roberto; Cavagna, Mauro; Vescovo, Loris
2015-01-08
Proximal sensing is fundamental to monitor the spatial and seasonal dynamics of ecosystems and can be considered as a crucial validation tool to upscale in situ observations to the satellite level. Linking hyperspectral remote sensing with carbon fluxes and biophysical parameters is critical to allow the exploitation of spatial and temporal extensive information for validating model simulations at different scales. In this study, we present the WhiteRef, a new hyperspectral system designed as a direct result of the needs identified during the EUROSPEC ES0903 Cost Action, and developed by Fondazione Edmund Mach and the Institute of Biometeorology, CNR, Italy. The system is based on the ASD FieldSpec Pro spectroradiometer and was designed to acquire continuous radiometric measurements at the Eddy Covariance (EC) towers and to fill a gap in the scientific community: in fact, no system for continuous spectral measurements in the Short Wave Infrared was tested before at the EC sites. The paper illustrates the functioning of the WhiteRef and describes its main advantages and disadvantages. The WhiteRef system, being based on a robust and high quality commercially available instrument, has a clear potential for unattended continuous measurements aiming at the validation of satellites' vegetation products.
What Climate Sensitivity Index Is Most Useful for Projections?
NASA Astrophysics Data System (ADS)
Grose, Michael R.; Gregory, Jonathan; Colman, Robert; Andrews, Timothy
2018-02-01
Transient climate response (TCR), transient response at 140 years (T140), and equilibrium climate sensitivity (ECS) indices are intended as benchmarks for comparing the magnitude of climate response projected by climate models. It is generally assumed that TCR or T140 would explain more variability between models than ECS for temperature change over the 21st century, since this timescale is the realm of transient climate change. Here we find that TCR explains more variability across Coupled Model Intercomparison Project phase 5 than ECS for global temperature change since preindustrial, for 50 or 100 year global trends up to the present, and for projected change under representative concentration pathways in regions of delayed warming such as the Southern Ocean. However, unexpectedly, we find that ECS correlates higher than TCR for projected change from the present in the global mean and in most regions. This higher correlation does not relate to aerosol forcing, and the physical cause requires further investigation.
NASA Astrophysics Data System (ADS)
Jammazi, Rania; Aloui, Chaker
2015-10-01
This paper analyzes the interactive linkages between carbon dioxide (CO2) emissions, energy consumption (EC) and economic growth (EG) using a novel approach namely wavelet windowed cross correlation (WWCC) for six oil-exporting countries from the GCC (Gulf Cooperation Council) region over the period 1980-2012. Our empirical results show that there exists a bidirectional causal relationship between EC and EG. However, the results support the occurrence of unidirectional causality from EC to CO2 emissions without any feedback effects, and there exists a bidirectional causal relationship between EG and CO2 emissions for the region as a whole. The study suggests that environmental and energy policies should recognize the differences in the nexus between EC and EG in order to maintain sustainable EG in the GCC region. Our findings will be useful for GCC countries to better evaluate its situation in the future climate negotiations. The overall findings will help GCC countries assess its position better in future climate change negotiations.
Indoleamine 2,3-dioxygenase 1 and overall survival of patients diagnosed with esophageal cancer
Rosenberg, Ari J.; Wainwright, Derek A.; Rademaker, Alfred; Galvez, Carlos; Genet, Matthew; Zhai, Lijie; Lauing, Kristen L.; Mulcahy, Mary F.; Hayes, John P.; Odell, David D.; Horbinski, Craig; Komanduri, Srinadh; Tetreault, Marie-Pier; Kim, Kwang-Youn A.; Villaflor, Victoria M.
2018-01-01
Background Indoleamine 2,3-dioxygenase 1 (IDO1) is an enzyme with immunomodulatory properties that has emerged as a potential immunotherapeutic target in human cancer. However, the role, expression pattern, and relevance of IDO1 in esophageal cancer (EC) are poorly understood. Here, we utilize gene expression analysis of the cancer genome atlas (TCGA) and immunohistochemistry (IHC) to better understand the role and prognostic significance of IDO1 in EC. Results High IDO1 mRNA levels were associated with worse overall survival (OS) in both esophageal squamous cell carcinoma (SCC) (P = 0.02) and adenocarcinoma (AC) (P = 0.036). High co-expression of IDO1 and programmed death ligand 1 (PD-L1) was associated with worse OS in SCC (P = 0.0031) and AC (P = 0.0186). IHC for IDO1 in SCC showed a significant correlation with PD-L1 (P < 0.0001) and CD3ε (P < 0.0001). Conclusions EC with high IDO1 and PD-L1 expression is significantly correlated with decreased patient survival, and may correlate with increased T-cells. These data suggest that simultaneous inhibition of IDO1 and PD-(L)1 may overcome important barriers to T-cell mediated immune rejection of EC. Materials and Methods mRNA expression data from TCGA (SCC N = 87; AC N = 97). IHC in a second cohort of EC (N = 93) were stained for IDO1, PD-L1, and CD3ε, followed by light microscopic analysis. PMID:29805749
Weber, Thomas J; Koh, James; Thomas, Samantha M; Hogue, Joyce A; Scheri, Randall P; Roman, Sanziana A; Sosa, Julie A
2017-09-01
A subset of PHPT patients exhibit a more severe disease phenotype characterized by bone loss, fractures, recurrent nephrolithiasis, and other dysfunctions, but the underlying reasons for this disparity in clinical presentation remain unknown. We sought to identify new mechanistic indices that could inform more personalized management of PHPT. Pre-, peri-, and postoperative data and demographic, clinical, and pathological information from patients undergoing parathyroidectomy for PHPT were collected. Univariate and partial Spearman correlation was used to estimate the association of parathyroid tumor calcium sensing capacity with select variables. An unselected series of 237 patients aged >18years and undergoing parathyroidectomy for PHPT were enrolled. Calcium sensing capacity, expressed as the concentration required for half-maximal biochemical response (EC50), was evaluated in parathyroid tumors from an unselected series of 74 patients and assessed for association with clinical parameters. The hypothesis was that greater disease severity would be associated with attenuated calcium sensitivity and biochemically autonomous parathyroid tumor behavior. Parathyroid tumors segregated into two distinct groups of calcium responsiveness (EC50<3.0 and ≥3.0mM). The low EC50 group (n=27) demonstrated a mean calcium EC50 value of 2.49mM [95% confidence interval (CI): 2.43-2.54mM], consistent with reference normal activity. In contrast, the high EC50 group (n=47) displayed attenuated calcium sensitivity with a mean EC50 value of 3.48mM [95% CI: 3.41-3.55mM]. Retrospective analysis of the clinical registry data suggested that high calcium EC50 patients presented with a more significant preoperative bone mineral density (BMD) deficit with a t-score of -2.7, (95% CI: -3.4 to -1.9) versus 0.9, (95% CI: -2.1 to -0.4) in low EC50 patients (p<0.001). After adjusting for gender, age, BMI, 25 OH vitamin D level and preoperative iPTH, lowest t-score and calcium EC50 were inversely correlated, with a partial Spearman correlation coefficient of -0.35 (p=0.02). Impaired calcium sensing in parathyroid tumors is selectively observed in a subset of patients with more severe bone mineral density deficit. Assessment of parathyroid tumor biochemical behavior may be a useful predictor of disease severity as measured by bone mineral density in patients with PHPT. Copyright © 2017 Elsevier Inc. All rights reserved.
NASA Astrophysics Data System (ADS)
Chen, D.; Zhao, Y.; Lyu, R.
2017-12-01
The optical properties of light absorbing carbon (LAC) in atmospheric aerosols, including their uncertainties, temporal change and spatial pattern were studied at suburban, urban and industrial sites in Nanjing, a typical polluted city in Yangtze River Delta (YRD). The optical properties of black carbon (BC) and the uncertainty in radiative absorption of BC were quantified combining cavity attenuated phase shift (CAPS) and thermal-optical techniques. It was found that applying a constant value from previous studies for multiple scattering factor could not well represent the actual absorption characteristics of aerosols in Nanjing. The relative deviation between calculated and measured absorption coefficient of BC was up to 56 ± 34%. A significant positive correlation (R2=0.95) was found between multiple scattering factor (C*) and the mixing state of EC (ECopt/EC) within the ECopt/EC ranged 0.43 0.92 (C*=1.64(ECopt/EC)+1.47, 0.43opt/EC<0.57; C*=6.42(ECopt/EC)-1.39, 0.57opt/EC<0.92). However, C* were not linearly correlated with ECopt/EC when the ratios were below 0.43 or above 0.92. The content of isoprene from biogenic volatile organic compounds (BVOCs) was higher in summer (5.8%) than that in autumn (0.5%). Brown carbon (BrC) associated with anthropogenic precursors was stronger in light absorption than that from biogenic sources, thus precursors of secondary organic aerosol (SOA) was probably the main reason for seasonal variation in MAE of BrC. At industrial site, linear positive correlation (R=0.87) was found between measured MSOC and secondary organic carbon (SOC), suggesting SOA formation was the major source of MSOC in this area. The lower MAE values of MSOC indicated that BrC generated from secondary sources might demonstrate weaker light absorbing ability than that from primary emissions. Furthermore, quantitative analysis showed that MAE BrC, 365 reduced by 0.26 m2/g when SOC increased by 1μgC/m3. This study provided insights into a more comprehensive understanding of LAC aerosol in cities with heavy particle pollution, since MSOC served as a surrogate for BrC and EC was measured with reliable and effective methods.
NASA Astrophysics Data System (ADS)
Ullgren, J. E.; van Aken, H. M.; Ridderinkhof, H.; de Ruijter, W. P. M.
2012-11-01
Temperature, salinity and velocity data are presented, along with the estimated volume transport, from seven full-length deep sea moorings placed across the narrowest part of the Mozambique Channel, southwest Indian Ocean, during the period November 2003 to December 2009. The dominant water mass in the upper layer is Sub-Tropical Surface Water (STSW) which overlies South Indian Central Water (SICW), and is normally capped by fresher Tropical Surface Water (TSW). Upper ocean salinity increased through 2005 as a result of saline STSW taking up a relatively larger part of the upper layer, at the expense of TSW. Upper waters are on average warmer and lighter in the central Channel than on the sides. Throughout the upper 1.5 km of the water column there is large hydrographic variability, short-term as well as interannual, and in particular at frequencies (four to seven cycles per year) associated with the southward passage of anticyclonic Mozambique Channel eddies. The eddies have a strong T-S signal, in the upper and central waters as well as on the intermediate level, as the eddies usually carry saline Red Sea Water (RSW) in their core. While the interannual frequency band displays an east-west gradient with higher temperature variance on the western side, the eddy frequency band shows highest variance in the centre of the Channel, where the eddy band contains about 40% of the total isopycnal hydrographic variability. Throughout the >6 years of measurements, the frequency and characteristics of eddies vary between periods, both in terms of strength and vertical structure of eddy T-S signals. These changes contribute to the interannual variability of water mass properties: an increase in central water salinity to a maximum in late 2007 coincided with a period of unusually frequent eddies with strong salinity signals. The warmest and most saline deep water is found within the northward flowing Mozambique Undercurrent, on the western side of the Channel. The Undercurrent has two cores: an intermediate one mainly containing diluted Antarctic Intermediate Water (AAIW), and a deep one consisting of North Atlantic Deep Water (NADW). In the intermediate core, T-S properties are strongly correlated with current velocity, probably because of the strong salinity gradient at the interface between Red Sea Water (RSW) and AAIW. In the deep core, velocity and hydrographic time series do not correlate on a daily basis, but they do at longer time scales.
A quantitative comparison of two methods to correct eddy current-induced distortions in DT-MRI.
Muñoz Maniega, Susana; Bastin, Mark E; Armitage, Paul A
2007-04-01
Eddy current-induced geometric distortions of single-shot, diffusion-weighted, echo-planar (DW-EP) images are a major confounding factor to the accurate determination of water diffusion parameters in diffusion tensor MRI (DT-MRI). Previously, it has been suggested that these geometric distortions can be removed from brain DW-EP images using affine transformations determined from phantom calibration experiments using iterative cross-correlation (ICC). Since this approach was first described, a number of image-based registration methods have become available that can also correct eddy current-induced distortions in DW-EP images. However, as yet no study has investigated whether separate eddy current calibration or image-based registration provides the most accurate way of removing these artefacts from DT-MRI data. Here we compare how ICC phantom calibration and affine FLIRT (http://www.fmrib.ox.ac.uk), a popular image-based multi-modal registration method that can correct both eddy current-induced distortions and bulk subject motion, perform when registering DW-EP images acquired with different slice thicknesses (2.8 and 5 mm) and b-values (1000 and 3000 s/mm(2)). With the use of consistency testing, it was found that ICC was a more robust algorithm for correcting eddy current-induced distortions than affine FLIRT, especially at high b-value and small slice thickness. In addition, principal component analysis demonstrated that the combination of ICC phantom calibration (to remove eddy current-induced distortions) with rigid body FLIRT (to remove bulk subject motion) provided a more accurate registration of DT-MRI data than that achieved by affine FLIRT.
Validation of a measure of the Satter eating competence model with low-income females
2011-01-01
Background The purpose of this study was to evaluate the construct validity of a version of the ecSatter Inventory (ecSI), a measure of eating competence (EC), as adapted for use in a low-income (LI) population. Methods Females (n = 507), aged 18 to 45 years, living in households with a history of participating in the Supplemental Nutrition Assistance Program completed a web-based survey that included the ecSI for LI (ecSI/LI) and valid measures of cognitive and affective eating behavior, food preference and practice, and food preparation. Results Most correlations and differences between eating competent and non-eating competent categories and among EC tertiles were compatible with hypothesized relationships. ecSI/LI scores were positively related with self-reported physical activity, food acceptance, fruit and vegetable intake, and food planning/resource management. ecSI/LI scores were negatively associated with body mass index, dissatisfaction with body weight, tendency to overeat in response to external or emotional stimuli, and indices of psychosocial attributes related to disordered eating. Conclusions The ecSI/LI is a valid measure of EC for low-income females and provides a tool for researchers and educators to assess intervention outcomes and further explore the EC construct. PMID:21473765
Validation of a measure of the Satter eating competence model with low-income females.
Krall, Jodi S; Lohse, Barbara
2011-04-07
The purpose of this study was to evaluate the construct validity of a version of the ecSatter Inventory (ecSI), a measure of eating competence (EC), as adapted for use in a low-income (LI) population. Females (n=507), aged 18 to 45 years, living in households with a history of participating in the Supplemental Nutrition Assistance Program completed a web-based survey that included the ecSI for LI (ecSI/LI) and valid measures of cognitive and affective eating behavior, food preference and practice, and food preparation. Most correlations and differences between eating competent and non-eating competent categories and among EC tertiles were compatible with hypothesized relationships. ecSI/LI scores were positively related with self-reported physical activity, food acceptance, fruit and vegetable intake, and food planning/resource management. ecSI/LI scores were negatively associated with body mass index, dissatisfaction with body weight, tendency to overeat in response to external or emotional stimuli, and indices of psychosocial attributes related to disordered eating. The ecSI/LI is a valid measure of EC for low-income females and provides a tool for researchers and educators to assess intervention outcomes and further explore the EC construct. © 2011 Krall and Lohse; licensee BioMed Central Ltd.
Eddy-Covariance and auxiliary measurements, NGEE-Barrow, 2012-2013
Torn, Margaret; Billesbach, Dave; Raz-Yaseef, Naama
2014-03-24
The EC tower is operated as part of the Next Generation Ecosystem Experiment-Arctic (NGEE) at Barrow, Alaska. The tower is collecting flux data from the beginning of the thaw season, early June, and until conditions are completely frozen, early November. The tower is equipped with a Gill R3-50 Sonic Anemometer, LI-7700 (CH4) sensor, a LI-7500A (CO2/H2O) sensor, and radiation sensors (Kipp and Zonen CNR-4 (four component radiometer), two LiCor LI-190 quantum sensors (PAR upwelling and downwelling), and a down-looking Apogee SI-111 infrared radiometer (surface temperature)). The sensors are remotely controlled, and communication with the tower allows us to retrieve information in real time.
Mathur, Praveen; Sharma, Sarita; Soni, Bhupendra
2010-01-01
In the present work, an attempt is made to formulate multiple regression equations using all possible regressions method for groundwater quality assessment of Ajmer-Pushkar railway line region in pre- and post-monsoon seasons. Correlation studies revealed the existence of linear relationships (r 0.7) for electrical conductivity (EC), total hardness (TH) and total dissolved solids (TDS) with other water quality parameters. The highest correlation was found between EC and TDS (r = 0.973). EC showed highly significant positive correlation with Na, K, Cl, TDS and total solids (TS). TH showed highest correlation with Ca and Mg. TDS showed significant correlation with Na, K, SO4, PO4 and Cl. The study indicated that most of the contamination present was water soluble or ionic in nature. Mg was present as MgCl2; K mainly as KCl and K2SO4, and Na was present as the salts of Cl, SO4 and PO4. On the other hand, F and NO3 showed no significant correlations. The r2 values and F values (at 95% confidence limit, alpha = 0.05) for the modelled equations indicated high degree of linearity among independent and dependent variables. Also the error % between calculated and experimental values was contained within +/- 15% limit.
Ogunade, I M; Jiang, Y; Pech Cervantes, A A; Kim, D H; Oliveira, A S; Vyas, D; Weinberg, Z G; Jeong, K C; Adesogan, A T
2018-03-01
The first objective of this study was to examine effects of adding Escherichia coli O157:H7 with or without chemical or microbial additives on the bacterial diversity and composition of alfalfa silage. The second objective was to examine associations between the relative abundance of known and unknown bacterial species and indices of silage fermentation quality. Alfalfa forage was harvested at 54% dry matter, chopped to a theoretical length of cut of 19 mm, and ensiled in quadruplicate in laboratory silos for 100 d after the following treatments were applied: (1) distilled water (control); (2) 1 × 10 5 cfu/g of E. coli O157:H7 (EC); (3) EC and 1 × 10 6 cfu/g of Lactobacillus plantarum (EC+LP); (4) EC and 1 × 10 6 cfu/g of Lactobacillus buchneri (EC+LB); and (5) EC and 0.22% propionic acid (EC+PA). After 100 d of ensiling, the silage samples were analyzed for bacterial diversity and composition via the Illumina MiSeq platform (Illumina Inc., San Diego, CA) and chemically characterized. Overall, Firmicutes (74.1 ± 4.86%) was the most predominant phylum followed by Proteobacteria (20.4 ± 3.80%). Relative to the control, adding E. coli O157:H7 alone at ensiling did not affect bacterial diversity or composition but adding EC+LP or EC+LB reduced the Shannon index, a measure of diversity (3.21 vs. 2.63 or 2.80, respectively). The relative abundance of Firmicutes (69.2 and 68.8%) was reduced, whereas that of Proteobacteria (24.0 and 24.9%) was increased by EC+LP and EC+PA treatments, relative to those of the control (79.5 and 16.5%) and EC+LB (77.4 and 18.5%) silages, respectively. Compared with the control, treatment with EC+LP increased the relative abundance of Lactobacillus, Sphingomonas, Pantoea, Pseudomonas, and Erwinia by 426, 157, 200, 194, and 163%, respectively, but reduced those of Pediococcus, Weissella, and Methylobacterium by 5,436, 763, and 250%, respectively. Relative abundance of Weissella (9.19%) and Methylobacterium (0.94%) were also reduced in the EC+LB silage compared with the control (29.7 and 1.50%, respectively). Application of propionic acid did not affect the relative abundance of Lactobacillus, Weissella, or Pediococcus. Lactate concentration correlated positively (r = 0.56) with relative abundance of Lactobacillus and negatively (r = -0.41) with relative abundance of Pediococcus. Negative correlations were detected between ammonia-N concentration and relative abundance of Sphingomonas (r = -0.51), Pantoea (r = -0.46), Pseudomonas (r = -0.45), and Stenotrophomonas (r = -0.38). Silage pH was negatively correlated with relative abundance of Lactobacillus (r = -0.59), Sphingomonas (r = -0.66), Pantoea (r = -0.69), Pseudomonas (r = -0.69), and Stenotrophomonas (r = -0.50). Future studies should aim to speciate, culture, and determine the functions of the unknown bacteria detected in this study to elucidate their roles in silage fermentation. Copyright © 2018 American Dairy Science Association. Published by Elsevier Inc. All rights reserved.
NASA Astrophysics Data System (ADS)
Antony Chen, L.-W.; Doddridge, Bruce G.; Dickerson, Russell R.; Chow, Judith C.; Mueller, Peter K.; Quinn, John; Butler, William A.
As part of Maryland Aerosol Research and CHaracterization (MARCH-Atlantic) study, measurements of 24-hr average elemental carbon (EC) aerosol concentration were made at Fort Meade, Maryland, USA, a suburban site within the Baltimore-Washington corridor during July 1999, October 1999, January 2000, April 2000 and July 2000. Carbon monoxide (CO) and sulfur dioxide (SO2) were also measured nearly continuously over the period. Tight correlation between EC and CO in every month suggests common or proximate sources, likely traffic emissions. The EC versus CO slope varies in different seasons and generally increases with ambient temperature. The temperature dependence of EC/CO ratios suggests that EC source strength peaks in summer. By using the well established emission inventory for CO, and EC/CO ratio found in this study, EC emission over North America is estimated at 0.31±0.12 Tg yr-1, on the low end but in reasonable agreement with prior inventories based on emission factors and fuel consumption.
NASA Astrophysics Data System (ADS)
Chen, L.-W. Antony; Doddridge, Bruce G.; Dickerson, Russell R.; Chow, Judith C.; Mueller, Peter K.; Quinn, John; Butler, William A.
2001-05-01
As part of Maryland Aerosol Research and CHaracterization (MARCH-Atlantic) study, measurements of 24-hr average elemental carbon (EC) aerosol concentration were made at Fort Meade, Maryland, USA, a suburban site within the Baltimore-Washington corridor during July 1999, October 1999, January 2000, April 2000 and July 2000. Carbon monoxide (CO) and sulfur dioxide (SO2) were also measured nearly continuously over the period. Tight correlation between EC and CO in every month suggests common or proximate sources, likely traffic emissions. The EC versus CO slope varies in different seasons and generally increases with ambient temperature. The temperature dependence of EC/CO ratios suggests that EC source strength peaks in summer. By using the well established emission inventory for CO, and EC/CO ratio found in this study, EC emission over North America is estimated at 0.31+/-0.12Tgyr-1, on the low end but in reasonable agreement with prior inventories based on emission factors and fuel consumption.
Universal characteristics of fractal fluctuations in prime number distribution
NASA Astrophysics Data System (ADS)
Selvam, A. M.
2014-11-01
The frequency of occurrence of prime numbers at unit number spacing intervals exhibits self-similar fractal fluctuations concomitant with inverse power law form for power spectrum generic to dynamical systems in nature such as fluid flows, stock market fluctuations and population dynamics. The physics of long-range correlations exhibited by fractals is not yet identified. A recently developed general systems theory visualizes the eddy continuum underlying fractals to result from the growth of large eddies as the integrated mean of enclosed small scale eddies, thereby generating a hierarchy of eddy circulations or an inter-connected network with associated long-range correlations. The model predictions are as follows: (1) The probability distribution and power spectrum of fractals follow the same inverse power law which is a function of the golden mean. The predicted inverse power law distribution is very close to the statistical normal distribution for fluctuations within two standard deviations from the mean of the distribution. (2) Fractals signify quantum-like chaos since variance spectrum represents probability density distribution, a characteristic of quantum systems such as electron or photon. (3) Fractal fluctuations of frequency distribution of prime numbers signify spontaneous organization of underlying continuum number field into the ordered pattern of the quasiperiodic Penrose tiling pattern. The model predictions are in agreement with the probability distributions and power spectra for different sets of frequency of occurrence of prime numbers at unit number interval for successive 1000 numbers. Prime numbers in the first 10 million numbers were used for the study.
Eddy correlation measurements of submarine groundwater discharge
Crusius, John; Berg, P.; Koopmans, D.J.; Erban, L.
2008-01-01
This paper presents a new, non-invasive means of quantifying groundwater discharge into marine waters using an eddy correlation approach. The method takes advantage of the fact that, in virtually all aquatic environments, the dominant mode of vertical transport near the sediment–water interface is turbulent mixing. The technique thus relies on measuring simultaneously the fluctuating vertical velocity using an acoustic Doppler velocimeter and the fluctuating salinity and/or temperature using rapid-response conductivity and/or temperature sensors. The measurements are typically done at a height of 5–15 cm above the sediment surface, at a frequency of 16 to 64 Hz, and for a period of 15 to 60 min. If the groundwater salinity and/or temperature differ from that of the water column, the groundwater specific discharge (cm d− 1) can be quantified from either a heat or salt balance. Groundwater discharge was estimated with this new approach in Salt Pond, a small estuary on Cape Cod (MA, USA). Estimates agreed well with previous estimates of discharge measured using seepage meters and 222Rn as a tracer. The eddy correlation technique has several desirable characteristics: 1) discharge is quantified under in-situ hydrodynamic conditions; 2) salinity and temperature can serve as two semi-independent tracers of discharge; 3) discharge can be quantified at high temporal resolution, and 4) long-term records of discharge may be possible, due to the low power requirements of the instrumentation.
Fischer, Milan; Zenone, Terenzio; Trnka, Miroslav; ...
2017-12-26
Poplars are among the most widely used short rotation woody coppice (SRWC) species but due to their assumed high water use, concerns have been raised with respect to large-scale exploitation and potentially detrimental effects on water resources. Here we present a quantitative analysis of the water requirements of poplar SRWC using experimental data and a soil water balance modelling approach at three different sites across Europe. We used (i) eddy covariance (EC) measurements (2004–2006) at an irrigated SRWC grown on a previous rice paddy in northern Italy, (ii) Bowen ratio and energy balance (BREB) measurements (2008–2015) and EC (2011–2015) atmore » a SRWC in rain-fed uplands in the Czech Republic, and (iii) EC measurements (2010–2013) at a SRWC on a previous agricultural land with a shallow water table in Belgium. Without any calibration against water balance component measurements, simulations by the newly developed soil water balance model R-4ET were compared with evapotranspiration (ET) measurements by EC and BREB with a resulting mean root mean square error (RMSE) of 0.75 mm day -1. In general, there was better agreement between EC and the model (RMSE = 0.66 mm day -1) when EC data were adjusted for lack of energy balance closure. A comparison of the simulated and measured soil water content yielded a mean RMSE of 0.03 m 3 m -3. The mean annual crop coefficient, i.e. the ratio between actual and reference ET, was 0.82 (ranging from 0.65 to 0.95) while the monthly maxima reached 1.16. These values indicated that ET of poplar SRWC was significantly lower than ET of a well-watered grass cover at the annual time scale, but exceeded ET of the reference cover at shorter time scales during the growing season. We show that the model R-4ET is a simple, yet reliable tool for the assessment of water requirements of existing or planned SRWC. For very simple assessments on an annual basis, using a crop coefficient of 0.86 (adjusted to a sub-humid climate), representing an average value across the three sites in years with no evident drought stress, is supported by this analysis.« less
Effects of management thinning on carbon dioxide uptake by a plantation oak woodland in SE England
NASA Astrophysics Data System (ADS)
Wilkinson, Matthew; Eaton, Edward; Casella, Eric; Crow, Peter; Morison, James
2013-04-01
Eddy covariance (EC) methods are widely used to estimate net ecosystem CO2 exchanges from sub-hourly to inter-annual time scales. The majority of forest sites contributing to the global EC networks are located in large, unmanaged forest areas. However, managed and plantation forests have an important role in greenhouse gas emissions abatement, nationally and globally, as exemplified by LULUCF inventory reporting. In the lowland areas of the UK forestry is mainly carried out in small woodlands, heterogeneous in species and structure and with regular management interventions. The aim of this study was to improve our understanding of the influence of management on forest CO2 uptake during a stand-scale thinning. CO2 fluxes have been measured using EC at the 70-80 year old, 90 ha oak-with-understorey plantation of the Straits Inclosure in the Alice Holt Research Forest since 1998. The mean annual net ecosystem productivity (NEP) from EC over 12 years was 486g C m-2 y-1, although there has been substantial inter-annual variation (95 % CI of ± 73g C m-2 y-1). This has been partitioned into a gross primary productivity (GPP) of 2034 ± 145g C m-2 y-1 and an ecosystem respiration rate (Reco) of 1548 ± 122 C m-2 y-1. In 2007 approximately 50% of the woodland area within the EC flux tower footprint was selectively thinned according to normal management prescription with mechanical harvesters. High resolution aerial LiDAR surveys of the whole woodland collected pre- (2006) and post- (2010) thin were used to characterise the canopy gap fraction and tree height changes. We then used EC footprint analysis combined with LiDAR data to quantify the effects of the management thinning and subsequent recovery on the CO2 flux and partitioning. Following the management thinning there was an average reduction in peak midday summer uptakes of approximately 5 μmol CO2 m-2 s-1 (20%) compared to fluxes from the un-thinned area, and a larger depression in night-time efflux. A depression in net daily CO2 uptake was still evident in the summer of 2010, three years after the thin. The implications of such management intervention for woodland C balances are discussed.
DOE Office of Scientific and Technical Information (OSTI.GOV)
Fischer, Milan; Zenone, Terenzio; Trnka, Miroslav
Poplars are among the most widely used short rotation woody coppice (SRWC) species but due to their assumed high water use, concerns have been raised with respect to large-scale exploitation and potentially detrimental effects on water resources. Here we present a quantitative analysis of the water requirements of poplar SRWC using experimental data and a soil water balance modelling approach at three different sites across Europe. We used (i) eddy covariance (EC) measurements (2004–2006) at an irrigated SRWC grown on a previous rice paddy in northern Italy, (ii) Bowen ratio and energy balance (BREB) measurements (2008–2015) and EC (2011–2015) atmore » a SRWC in rain-fed uplands in the Czech Republic, and (iii) EC measurements (2010–2013) at a SRWC on a previous agricultural land with a shallow water table in Belgium. Without any calibration against water balance component measurements, simulations by the newly developed soil water balance model R-4ET were compared with evapotranspiration (ET) measurements by EC and BREB with a resulting mean root mean square error (RMSE) of 0.75 mm day -1. In general, there was better agreement between EC and the model (RMSE = 0.66 mm day -1) when EC data were adjusted for lack of energy balance closure. A comparison of the simulated and measured soil water content yielded a mean RMSE of 0.03 m 3 m -3. The mean annual crop coefficient, i.e. the ratio between actual and reference ET, was 0.82 (ranging from 0.65 to 0.95) while the monthly maxima reached 1.16. These values indicated that ET of poplar SRWC was significantly lower than ET of a well-watered grass cover at the annual time scale, but exceeded ET of the reference cover at shorter time scales during the growing season. We show that the model R-4ET is a simple, yet reliable tool for the assessment of water requirements of existing or planned SRWC. For very simple assessments on an annual basis, using a crop coefficient of 0.86 (adjusted to a sub-humid climate), representing an average value across the three sites in years with no evident drought stress, is supported by this analysis.« less
NASA Astrophysics Data System (ADS)
Guha, A.; Misztal, P. K.; Peischl, J.; Karl, T.; Jonsson, H. H.; Woods, R. K.; Ryerson, T. B.; Goldstein, A. H.
2013-12-01
Quantifying the contributions of methane (CH4) emissions from anthropogenic sources in the Central Valley of California is important for validation of the statewide greenhouse gas (GHG) inventory and subsequent AB32 law implementation. The state GHG inventory is largely based on activity data and emission factor based estimates. The 'bottom-up' emission factors for CH4 have large uncertainties and there is a lack of adequate 'top-down' measurements to characterize emission rates. Emissions from non-CO2 GHG sources display spatial heterogeneity and temporal variability, and are thus, often, poorly characterized. The Central Valley of California is an agricultural and industry intensive region with large concentration of dairies and livestock operations, active oil and gas fields and refining operations, as well as rice cultivation all of which are known CH4 sources. In order to gain a better perspective of the spatial distribution of major CH4 sources in California, airborne measurements were conducted aboard a Twin Otter aircraft for the CABERNET (California Airborne BVOC Emissions Research in Natural Ecosystems Transects) campaign, where the driving research goal was to understand the spatial distribution of biogenic VOC emissions. The campaign took place in June 2011 and encompassed over forty hours of low-altitude and mixed layer airborne CH4 and CO2 measurements alongside coincident VOC measurements. Transects during eight unique flights covered much of the Central Valley and its eastern edge, the Sacramento-San Joaquin delta and the coastal range. We report direct quantification of CH4 fluxes using real-time airborne Eddy Covariance measurements. CH4 and CO2 were measured at 1-Hz data rate using an instrument based on Cavity Ring Down Spectroscopy (CRDS) along with specific VOCs (like isoprene, methanol, acetone etc.) measured at 10-Hz using Proton Transfer Reaction Mass Spectrometer - Eddy Covariance (PTRMS-EC) flux system. Spatially resolved eddy covariance fluxes were obtained using the virtual disjunct eddy covariance method and from Wavelet Analysis along flight tracks flown in the mixed layer. Preliminary analysis of mixing ratio measurements indicate that high concentrations of CH4 occur consistently while flying above the Central Valley that are correlated to large enhancements of methanol which is an important dairy and livestock emissions tracer. The elevated CH4 mixing ratios along the eastern edge of the San Joaquin Valley highlight the contribution of topography and emissions transport to local ambient levels of CH4. Large enhancements of CH4, benzene and toluene are also observed while flying over the oil production facilities in western part of Kern county (state's top oil producing county, 10% of US production) suggesting the likelihood of fugitive emissions in the region. VOC tracer analysis is used to evaluate the source of high CH4 emissions encountered along the eastern edge of the central Sacramento valley where fugitive emissions from natural gas fields and cultivation of rice are likely sources. Plumes from biomass burning, landfills and refineries encountered during different flights are also investigated. Eddy covariance based CH4 flux estimates are derived for various sources and compared with ';bottom-up' inventory estimates to verify/validate the CA methane inventory for major sources.
Birukova, Anna A; Arce, Fernando T; Moldobaeva, Nurgul; Dudek, Steven M; Garcia, Joe G N; Lal, Ratnesh; Birukov, Konstantin G
2009-03-01
Actomyosin contraction directly regulates endothelial cell (EC) permeability, but intracellular redistribution of cytoskeletal tension associated with EC permeability is poorly understood. We used atomic force microscopy (AFM), EC permeability assays, and fluorescence microscopy to link barrier regulation, cell remodeling, and cytoskeletal mechanical properties in EC treated with barrier-protective as well as barrier-disruptive agonists. Thrombin, vascular endothelial growth factor, and hydrogen peroxide increased EC permeability, disrupted cell junctions, and induced stress fiber formation. Oxidized 1-palmitoyl-2-arachidonoyl-sn-glycero-3-phosphocholine, hepatocyte growth factor, and iloprost tightened EC barriers, enhanced peripheral actin cytoskeleton and adherens junctions, and abolished thrombin-induced permeability and EC remodeling. AFM force mapping and imaging showed differential distribution of cell stiffness: barrier-disruptive agonists increased stiffness in the central region, and barrier-protective agents decreased stiffness in the center and increased it at the periphery. Attenuation of thrombin-induced permeability correlates well with stiffness changes from the cell center to periphery. These results directly link for the first time the patterns of cell stiffness with specific EC permeability responses.
Respiratory Sinus Arrhythmia, Shyness, and Effortful Control in Preschool-Age Children
Sulik, Michael J.; Eisenberg, Nancy; Silva, Kassondra M.; Spinrad, Tracy L.; Kupfer, Anne
2015-01-01
Resting respiratory sinus arrhythmia (RSA) and shyness were examined as predictors of effortful control (EC) in a sample of 101 preschool-age children. Resting RSA was calculated from respiration and heart rate data collected during a neutral film; shyness was measured using parents’, preschool teachers’, and classroom observers’ reports; and EC was measured using four laboratory tasks in addition to questionnaire measures. Principal components analysis was used to create composite measures of EC and shyness. The relation between RSA and EC was moderated by shyness, such that RSA was positively related to EC only for children high in shyness. This interaction suggests that emotional reactivity affects the degree to which RSA can be considered a correlate of EC. This study also draws attention to the need to consider the measurement context when assessing resting psychophysiology measures; shy individuals may not exhibit true baseline RSA responding in an unfamiliar laboratory setting. PMID:23127725
Towards an integrated quality control procedure for eddy-covariance data
NASA Astrophysics Data System (ADS)
Vitale, Domenico; Papale, Dario
2017-04-01
The eddy-covariance technique is nowadays the most reliable and direct way, allowing to calculate the main fluxes of Sensible and Latent Heat and of Net Ecosystem Exchange, this last being the result of the difference between the CO2 assimilated by photosynthetic activities and those released to the atmosphere through the ecosystem respiration processes. Despite the improvements in accuracy of measurement instruments and software development, the eddy-covariance technique is not suitable under non-ideal conditions respect to the instruments characteristics and the physical assumption behind the technique mainly related to the well-developed and stationary turbulence conditions. Under these conditions the calculated fluxes are not reliable and need to be flagged and discarded. In order to discover these unavoidable "bad" fluxes and build dataset with the highest quality, several tests applied both on high-frequency (10-20 Hz) raw data and on half-hourly times series have been developed in the past years. Nevertheless, there is an increasing need to develop a standardized quality control procedure suitable not only for the analysis of long-term data, but also for the near-real time data processing. In this paper, we review established quality assessment procedures and present an innovative quality control strategy with the purpose of integrating the existing consolidated procedures with robust and advanced statistical tests more suitable for the analysis of time series data. The performance of the proposed quality control strategy is evaluated both on simulated and EC data distributed by the ICOS research infrastructure. It is concluded that the proposed strategy is able to flag and exclude unrealistic fluxes while being reproducible and retaining the largest possible amount of high quality data.
Carlton, Joshua A; Maxwell, Adam W; Bauer, Lyndsey B; McElroy, Sara M; Layfield, Lester J; Ahsan, Humera; Agarwal, Ajay
2017-06-01
Background and purpose In patients with squamous cell carcinoma of the head and neck (HNSCC), extracapsular spread (ECS) of metastases in cervical lymph nodes affects prognosis and therapy. We assessed the accuracy of intravenous contrast-enhanced computed tomography (CT) and the utility of imaging criteria for preoperative detection of ECS in metastatic cervical lymph nodes in patients with HNSCC. Materials and methods Preoperative intravenous contrast-enhanced neck CT images of 93 patients with histopathological HNSCC metastatic nodes were retrospectively assessed by two neuroradiologists for ECS status and ECS imaging criteria. Radiological assessments were compared with histopathological assessments of neck dissection specimens, and interobserver agreement of ECS status and ECS imaging criteria were measured. Results Sensitivity, specificity, positive predictive value, and accuracy for overall ECS assessment were 57%, 81%, 82% and 67% for observer 1, and 66%, 76%, 80% and 70% for observer 2, respectively. Correlating three or more ECS imaging criteria with histopathological ECS increased specificity and positive predictive value, but decreased sensitivity and accuracy. Interobserver agreement for overall ECS assessment demonstrated a kappa of 0.59. Central necrosis had the highest kappa of 0.74. Conclusion CT has moderate specificity for ECS assessment in HNSCC metastatic cervical nodes. Identifying three or more ECS imaging criteria raises specificity and positive predictive value, therefore preoperative identification of multiple criteria may be clinically useful. Interobserver agreement is moderate for overall ECS assessment, substantial for central necrosis. Other ECS CT criteria had moderate agreement at best and therefore should not be used individually as criteria for detecting ECS by CT.
Bellone, Stefania; Eliana, Bignotti; Lonardi, Silvia; Ferrari, Francesca; Centritto, Floriana; Masserdotti, Alice; Pettinella, Francesca; Black, Jonathan; Menderes, Gulden; Altwerger, Gary; Hui, Pei; Lopez, Salvatore; de Haydu, Christopher; Bonazzoli, Elena; Predolini, Federica; Zammataro, Luca; Cocco, Emiliano; Ferrari, Federico; Ravaggi, Antonella; Romani, Chiara; Facchettie, Fabio; Sartori, Enrico; Odicino, Franco E.; Silasi, Dan-Arin; Litkouhi, Babak; Ratner, Elena; Azodi, Masoud; Schwartz, Peter E.; Santin, Alessandro D.
2016-01-01
Objective Up to 12 % of all endometrial-carcinomas (EC) harbor DNA-polymerase-ε-(POLE) mutations. It is currently unknown whether the favorable prognosis of POLE-mutated EC is derived from their low metastatic capability, extraordinary number of somatic mutations thus imparting immunogenicity, or a high sensitivity to chemotherapy. Methods Polymerase-chain-reaction-amplification and Sanger-sequencing were used to test for POLE exonuclease-domain-mutations (exons 9–14) 131 EC. Infiltration of CD4+ and CD8+ T-lymphocytes (TIL) and PD-1-expression in POLE-mutated vs POLE wild-type EC was studied by immunohistochemistry (IHC) and the correlations between survival and molecular features were investigated. Finally, primary POLE-mutated and POLE-wild-type EC cell lines were established and compared in-vitro for their sensitivity to chemotherapy. Results Eleven POLE-mutated EC (8.5%) were identified. POLE-mutated tumors were associated with improved progression-free-survival (P<0.05) and displayed increased numbers of CD4+ (44.5 vs 21.8; P = .001) and CD8+ (32.8 vs 13.5; P < .001) TILs when compared to wild-type POLE EC. PD-1 receptor was overexpressed in TILs from POLE-mutated vs wild-type-tumors (81% vs 28%; P < .001). Primary POLE tumor cell lines were significantly more resistant to platinum-chemotherapy in-vitro when compared to POLE-wild-type tumors (P < 0.004). Conclusions POLE ultra-mutated EC are heavily infiltrated with CD4+/CD8+ TIL, overexpress PD-1 immune-check-point (i.e., features consistent with chronic antigen-exposure), and have a better prognosis when compared to other molecular subtypes of EC patients. POLE-mutated tumor-cell lines are resistant to platinum-chemotherapy in-vitro suggesting that the better prognosis of POLE-patients is not secondary to a higher sensitivity to chemotherapy but likely linked to enhanced immunogenicity. PMID:27894751
NASA Astrophysics Data System (ADS)
El-Madany, T. S.; Migliavacca, M.; Perez-Priego, O.; Luo, Y.; Moreno, G.; Carrara, A.; Kolle, O.; Reichstein, M.
2017-12-01
In semi-arid savanna type ecosystems, the carbon and water cycle are closely related to each other. Water availability is the main driver for the development and phenology of the vegetation, especially for annual plants. Depending on tree density, nutrient availability and species the contribution of the tree- and the herbaceous layer to ecosystem fluxes can vary substantially. We present data from an ecosystem scale nutrient manipulation experiment within a Mediterranean savanna type ecosystem which is used for cattle. The footprint areas of two out of three ecosystem eddy co-variance (EC) towers were fertilized with nitrogen (NT) and nitrogen plus phosphorous (NPT) while the third one served as the control tower (CT). At each ecosystem EC-tower an additional herbaceous layer tower was installed that only sampled fluxes from the herbaceous layer. Under certain assumptions flux differences between the ecosystem EC and the herbaceous layer EC systems can be considered as the contribution of the trees to the ecosystem fluxes. Based on phenology of the herbaceous layer estimated through green-chromatic-coordinates from digital imagery the year was separated into spring, senescence, regreening, and winter. The focus of the analysis is (i) the evaluation of the method and how it works throughout the different seasons and (ii) the quantification of the contribution of trees and grasses to ecosystem fluxes of water, carbon, and energy under different environmental conditions and nutrient stoichiometry. The contribution of the trees to total ecosystem fluxes is variable in time. Especially, during the beginning of the senescence period high evapotranspiration rates and largest carbon uptake are measured while the contribution to sensible heat fluxes is largest during the end of the summer. During the regreening and winter the contribution of ET is relatively constant around 0.25 mm d-1. During the peak of the greenness ET and carbon flux of the herbaceous EC tower are sometimes higher than fluxes measured by the ecosystem tower which is most likely caused by the mismatch in footprints. Whenever the herbaceous layer is active it contributes clearly more to the fluxes as compared to the trees.
Productivity and CO2 exchange of Great Plains ecoregions. I. Shortgrass steppe: Flux tower estimates
Gilmanov, Tagir G.; Morgan, Jack A.; Hanan, Niall P.; Wylie, Bruce K.; Rajan, Nithya; Smith, David P.; Howard, Daniel M.
2017-01-01
The shortgrass steppe (SGS) occupies the southwestern part of the Great Plains. Half of the land is cultivated, but significant areas remain under natural vegetation. Despite previous studies of the SGS carbon cycle, not all aspects have been completely addressed, including gross productivity, ecosystem respiration, and ecophysiological parameters. Our analysis of 1998 − 2007 flux tower measurements at five Bowen ratio–energy balance (BREB) and three eddy covariance (EC) sites characterized seasonal and interannual variability of gross photosynthesis and ecosystem respiration. Identification of the nonrectangular hyperbolic equation for the diurnal CO2 exchange, with vapor pressure deficit (VPD) limitation and exponential temperature response, quantified quantum yield α, photosynthetic capacity Amax, and respiration rate rd with variation ranges (19 \\< α \\< 51 mmol mol− 1, 0.48 \\< Amax \\< 2.1 mg CO2 m− 2 s− 1, 0.15 \\< rd \\< 0.49 mg CO2 m− 2 s− 1). Gross photosynthesis varied from 1 100 to 2 700 g CO2 m− 2 yr− 1, respiration from 900 to 3,000 g CO2 m− 2 yr− 1, and net ecosystem production from − 900 to + 700 g CO2 m− 2 yr− 1, indicating that SGS may switch from a sink to a source depending on weather. Comparison of the 2004 − 2006 measurements at two BREB and two parallel EC flux towers located at comparable SGS sites showed moderately higher photosynthesis, lower respiration, and higher net production at the BREB than EC sites. However, the difference was not related only to methodologies, as the normalized difference vegetation index at the BREB sites was higher than at the EC sites. Overall magnitudes and seasonal patterns at the BREB and the EC sites during the 3-yr period were similar, with trajectories within the ± 1.5 standard deviation around the mean of the four sites and mostly reflecting the effects of meteorology.
NASA Astrophysics Data System (ADS)
Goldstein, A. H.; Fares, S.; Gentner, D. R.; Park, J.; Weber, R.; Ormeno, E.; Holzinger, R.; Misztal, P. K.; Karl, T. R.; Guenther, A. B.; Fischer, M. L.; Harley, R. A.; Karlik, J. F.
2011-12-01
Large portions of the Central Valley of California are out of compliance with current state and federal air quality standards for ozone and particulate matter, and the relative importance of biogenic and anthropogenic VOC emissions to their photochemical production in this region remains uncertain. In 2009-2011 multiple measurement campaigns were completed investigating the VOC emission inventory and concentration distributions. In 2009 BVOC emissions from more than 20 species of major agricultural crops in California were measured in a greenhouse using branch enclosures by both PTRMS and in-situ GC. Overall, crops were found to emit low amounts of BVOC compared to the natural forests surrounding the valley. Crops mainly emitted methanol and terpenes, with a broad array of other species emitted at lower levels, and all the measured crops showed negligible emissions of isoprene. Navel oranges were the largest crop BVOC emitters measured so a full year of flux measurements were made in an orange grove near Visalia in 2010 by eddy covariance(EC)-PTRMS with two multi-week periods of concentration measurements by hourly in-situ GC, and one month of high mass resolution flux measurements by EC-PTR-TOF-MS. The dominant BVOC emissions from the orange grove were methanol and terpenes, followed by acetone, acetaldehyde, and a low level of emissions for many other species. In 2011 aircraft eddy covariance measurements of BVOC fluxes were made by EC-PTRMS covering a large area of California as part of the California Airborne Bvoc Emission Research in Natural Ecosystem Transects (CABERNET) campaign aimed at improving BVOC emission models on regional scales, mainly profiling BVOC emissions from oak woodlands surrounding the Central Valley. In 2010, hourly in-situ VOC measurements were made via in-situ GC in Bakersfield, CA as part of the CalNex experiment. Additionally, in-situ measurements of fresh motor vehicle exhaust were made in Oakland's Caldecott tunnel. Measurements by in-situ GC included more than 200 anthropogenic and biogenic VOCs with a wide range of volatilities (up to 17 carbon atoms in size) and various functional groups (e.g. aldehydes, ketones, alcohols, halogens, sulfur, & nitrogen). Finally, in 2011 vertical profiles of VOC were made at 5 heights on a communication tower at Walnut Grove (~20 miles south of Sacramento) from 30' to 1550' by PTRMS. Results from all of these studies combined provide a novel overview of the distribution of VOC emissions and concentrations in, around, and above the Central Valley of California.
Modelling Unsteady Wall Pressures Beneath Turbulent Boundary Layers
NASA Technical Reports Server (NTRS)
Ahn, B-K.; Graham, W. R.; Rizzi, S. A.
2004-01-01
As a structural entity of turbulence, hairpin vortices are believed to play a major role in developing and sustaining the turbulence process in the near wall region of turbulent boundary layers and may be regarded as the simplest conceptual model that can account for the essential features of the wall pressure fluctuations. In this work we focus on fully developed typical hairpin vortices and estimate the associated surface pressure distributions and their corresponding spectra. On the basis of the attached eddy model, we develop a representation of the overall surface pressure spectra in terms of the eddy size distribution. Instantaneous wavenumber spectra and spatial correlations are readily derivable from this representation. The model is validated by comparison of predicted wavenumber spectra and cross-correlations with existing emperical models and experimental data.
Adopted Individuals' Views on the Utility and Value of Expanded Carrier Screening.
Spencer, Sara; Ewing, Sarah; Calcagno, Kathryn; O'Neill, Suzanne
2018-03-30
Adoptees may not have family medical history and ethnicity information. Carrier screening assesses reproductive risk. Expanded carrier screening (ECS) screens for many genetic conditions regardless of a patient's knowledge of family history and ethnicity. This study aimed to better understand the opinions and attitudes of adopted individuals on the use of ECS in determining a patient's reproductive genetic risks. Specifically, the study assessed how adopted individuals feel that results of ECS may be useful to them and whether adoptees feel that meeting with a genetics professional in the process of undergoing ECS would be useful. Adult adoptees (N = 124) were recruited online. Their opinions on ECS were explored. The majority reported they had never been offered carrier screening (92%). The majority of adoptees wanted ECS (76%). Neither the amount of contact with biological relatives nor having medical knowledge about biological relatives was significantly associated with adoptees' desire to pursue ECS. There was a significant positive correlation between adoptees of higher education levels and the amount they would pay for ECS (p = 0.004). The majority of participants (95%) indicated a genetics professional would be helpful when undergoing ECS. The findings suggest this population may want ECS and support from genetics healthcare professionals. Advocacy for genetic counseling and testing for adoptees appears justifiable.
NASA Astrophysics Data System (ADS)
Coburn, S.; Ortega, I.; Thalman, R.; Blomquist, B.; Fairall, C. W.; Volkamer, R.
2014-10-01
Here we present first eddy covariance (EC) measurements of fluxes of glyoxal, the smallest α-dicarbonyl product of hydrocarbon oxidation, and a precursor for secondary organic aerosol (SOA). The unique physical and chemical properties of glyoxal - i.e., high solubility in water (effective Henry's law constant, KH = 4.2 × 105 M atm-1) and short atmospheric lifetime (~2 h at solar noon) - make it a unique indicator species for organic carbon oxidation in the marine atmosphere. Previous reports of elevated glyoxal over oceans remain unexplained by atmospheric models. Here we describe a Fast Light-Emitting Diode Cavity-Enhanced Differential Optical Absorption Spectroscopy (Fast LED-CE-DOAS) instrument to measure diurnal variations and EC fluxes of glyoxal and inform about its unknown sources. The fast in situ sensor is described, and first results are presented from a cruise deployment over the eastern tropical Pacific Ocean (20° N to 10° S; 133 to 85° W) as part of the Tropical Ocean tRoposphere Exchange of Reactive halogens and Oxygenated VOCs (TORERO) field experiment (January to March 2012). The Fast LED-CE-DOAS is a multispectral sensor that selectively and simultaneously measures glyoxal (CHOCHO), nitrogen dioxide (NO2), oxygen dimers (O4), and water vapor (H2O) with ~2 Hz time resolution (Nyquist frequency ~1 Hz) and a precision of ~40 pptv Hz-0.5 for glyoxal. The instrument is demonstrated to be a "white-noise" sensor suitable for EC flux measurements. Fluxes of glyoxal are calculated, along with fluxes of NO2, H2O, and O4, which are used to aid the interpretation of the glyoxal fluxes. Further, highly sensitive and inherently calibrated glyoxal measurements are obtained from temporal averaging of data (e.g., detection limit smaller than 2.5 pptv in an hour). The campaign average mixing ratio in the Southern Hemisphere (SH) is found to be 43 ± 9 pptv glyoxal, which is higher than the Northern Hemisphere (NH) average of 32 ± 6 pptv (error reflects variability over multiple days). The diurnal variation of glyoxal in the marine boundary layer (MBL) is measured for the first time, and mixing ratios vary by ~8 pptv (NH) and ~12 pptv (SH) over the course of 24 h. Consistently, maxima are observed at sunrise (NH: 35 ± 5 pptv; SH: 47 ± 7 pptv), and minima at dusk (NH: 27 ± 5 pptv; SH: 35 ± 8 pptv). In both hemispheres, the daytime flux was directed from the atmosphere into the ocean, indicating that the ocean is a net sink for glyoxal during the day. After sunset the ocean was a source for glyoxal to the atmosphere (positive flux) in the SH; this primary ocean source was operative throughout the night. In the NH, the nighttime flux was positive only shortly after sunset and negative during most of the night. Positive EC fluxes of soluble glyoxal over oceans indicate the presence of an ocean surface organic microlayer (SML) and locate a glyoxal source within the SML. The origin of most atmospheric glyoxal, and possibly other oxygenated hydrocarbons over tropical oceans, remains unexplained and warrants further investigation.
Duell, Lowell F. W.
1990-01-01
In Owens Valley, evapotranspiration (ET) is one of the largest components of outflow in the hydrologic budget and the least understood. ET estimates for December 1983 through October 1985 were made for seven representative locations selected on the basis of geohydrology and the characteristics of phreatophytic alkaline scrub and meadow communities. The Bowen-ratio, eddy-correlation, and Penman-combination methods were used to estimate ET. The results of the analyses appear satisfactory when compared with other estimates of ET. Results by the eddy-correlation method are for a direct and a residual latent-heat flux that is based on sensible-heat flux and energy-budget measurements. Penman-combination potential-ET estimates were determined to be unusable because they overestimated actual ET. Modification of the psychrometer constant of this method to account for differences between heat-diffusion resistance and vapor-diffusion resistance permitted actual ET to be estimated. The methods described in this report may be used for studies in similar semiarid and arid rangeland areas in the Western United States. Meteorological data for three field sites are included in the appendix of this report. Simple linear regression analysis indicates that ET estimates are correlated to air temperature, vapor-density deficit, and net radiation. Estimates of annual ET range from 301 millimeters at a low-density scrub site to 1,137 millimeters at a high-density meadow site. The monthly percentage of annual ET was determined to be similar for all sites studied.
Advanced flow noise reducing acoustic sensor arrays
NASA Astrophysics Data System (ADS)
Fine, Kevin; Drzymkowski, Mark; Cleckler, Jay
2009-05-01
SARA, Inc. has developed microphone arrays that are as effective at reducing flow noise as foam windscreens and sufficiently rugged for tough battlefield environments. These flow noise reducing (FNR) sensors have a metal body and are flat and conformally mounted so they can be attached to the roofs of land vehicles and are resistant to scrapes from branches. Flow noise at low Mach numbers is created by turbulent eddies moving with the fluid flow and inducing pressure variations on microphones. Our FNR sensors average the pressure over the diameter (~20 cm) of their apertures, reducing the noise created by all but the very largest eddies. This is in contrast to the acoustic wave which has negligible variation over the aperture at the frequencies of interest (f less or equal than 400 Hz). We have also post-processed the signals to further reduce the flow noise. Two microphones separated along the flow direction exhibit highly correlated noise. The time shift of the correlation corresponds to the time for the eddies in the flow to travel between the microphones. We have created linear microphone arrays parallel to the flow and have reduced flow noise as much as 10 to 15 dB by subtracting time-shifted signals.
Cloud-top meridional momentum transports on Saturn and Jupiter
NASA Technical Reports Server (NTRS)
Stromovsky, L. A.; Revercomb, H. E.; Krauss, R. J.
1986-01-01
Cloud-tracked wind measurements reported by Sromovsky et al. were analyzed to determine meridional momentum transports in Saturn's northern middle latitudes. Results are expressed in terms of eastward and northward velocity components (u and v), and eddy components u and v. At most latitudes between 13 and 44 deg N (planetocentric), the transport by the mean flow (
Development of an indirect ELISA for the determination of ethyl carbamate in Chinese rice wine.
Luo, Lin; Lei, Hong-Tao; Yang, Jin-Yi; Liu, Gong-Liang; Sun, Yuan-Ming; Bai, Wei-Dong; Wang, Hong; Shen, Yu-Dong; Chen, Sui; Xu, Zhen-Lin
2017-01-15
The widespread occurrence of ethyl carbamate (EC, 89.09 Da), a group 2A carcinogen, in fermented foods and alcoholic beverages has raised worldwide public health concern. Immunoassay for EC is unavailable due to the simple and small structure of EC. In this work, an initial attempt to produce antibody specific for EC, by using 4-((ethoxycarbonyl)amino)butanoic acid as hapten, was made but failed. However, since EC can easily react with 9-xanthydrol to form xanthyl ethyl carbamate (XEC), two haptens based on XEC structure were designed and synthesized. Polyclonal antibody against XEC, instead of EC was obtained and then used to develop a competitive indirect ELISA for EC via a pre-analysis derivatization. After optimization, the ciELISA was applied in analyzing Chinese rice wine with detection limit of 166 μg/L, and negligible cross-reactivity with EC analogs. Recoveries of EC in fortified samples were from 84.4% to 100.9%, with coefficients of variation below 10%. Results for analysis of real samples by the ci-ELISA correlated well with that by reference method GC-MS, suggesting the good accuracy and reproducibility of the proposed method. This is the first report of an immunoassay capable of detecting EC, which is suitable for monitoring EC in a large amount of samples. Copyright © 2016 Elsevier B.V. All rights reserved.
NASA Astrophysics Data System (ADS)
Sexstone, Graham A.; Clow, David W.; Fassnacht, Steven R.; Liston, Glen E.; Hiemstra, Christopher A.; Knowles, John F.; Penn, Colin A.
2018-02-01
Snow sublimation is an important component of the snow mass balance, but the spatial and temporal variability of this process is not well understood in mountain environments. This study combines a process-based snow model (SnowModel) with eddy covariance (EC) measurements to investigate (1) the spatio-temporal variability of simulated snow sublimation with respect to station observations, (2) the contribution of snow sublimation to the ablation of the snowpack, and (3) the sensitivity and response of snow sublimation to bark beetle-induced forest mortality and climate warming across the north-central Colorado Rocky Mountains. EC-based observations of snow sublimation compared well with simulated snow sublimation at stations dominated by surface and canopy sublimation, but blowing snow sublimation in alpine areas was not well captured by the EC instrumentation. Water balance calculations provided an important validation of simulated sublimation at the watershed scale. Simulated snow sublimation across the study area was equivalent to 28% of winter precipitation on average, and the highest relative snow sublimation fluxes occurred during the lowest snow years. Snow sublimation from forested areas accounted for the majority of sublimation fluxes, highlighting the importance of canopy and sub-canopy surface sublimation in this region. Simulations incorporating the effects of tree mortality due to bark-beetle disturbance resulted in a 4% reduction in snow sublimation from forested areas. Snow sublimation rates corresponding to climate warming simulations remained unchanged or slightly increased, but total sublimation losses decreased by up to 6% because of a reduction in snow covered area and duration.
NASA Astrophysics Data System (ADS)
Loescher, Carolin; Fischer, Martin; Neulinger, Sven; Fiedler, Björn; Philippi, Miriam; Schütte, Florian; Singh, Arvind; Hauss, Helena; Karstensen, Johannes; Körtzinger, Arne; Schmitz, Ruth
2016-04-01
The eastern tropical North Atlantic (ETNA) is characterized by a highly productive coastal upwelling system and a moderate oxygen minimum zone with lowest open ocean oxygen (O2) concentrations of approximately 40 μmol kg-1. The recent discovery of re-occurring mesoscale eddies with close to anoxic O2 concentrations (<1 μmol kg-1) located just below the mixed layer has challenged our understanding of O2 distribution and biogeochemical processes in this area. Here, we present the first microbial community study from a deoxygenated anticyclonic modewater eddy in the open waters of the ETNA. In the eddy, we observed significantly lower bacterial diversity compared to surrounding waters, along with a significant community shift. We detected enhanced primary productivity in the surface layer of the eddy indicated by elevated chlorophyll concentrations and carbon uptake rates of up to three times as high as in surrounding waters. Carbon uptake rates below the euphotic zone correlated to the presence of a specific high-light ecotype of Prochlorococcus, which is usually underrepresented in the ETNA. Our data indicate that high primary production in the eddy fuels export production and supports enhanced respiration in a specific microbial community at shallow depths, below the mixed layer base. The O2-depleted core waters eddy promoted transcription of the key gene for denitrification, nirS. This process is usually absent from the open ETNA waters. In light of future projected ocean deoxygenation, our results show that even distinct events of anoxia have the potential to alter microbial community structure with critical impacts on primary productivity and biogeochemical processes of oceanic water bodies.
NASA Astrophysics Data System (ADS)
Löscher, C. R.; Fischer, M. A.; Neulinger, S. C.; Fiedler, B.; Philippi, M.; Schütte, F.; Singh, A.; Hauss, H.; Karstensen, J.; Körtzinger, A.; Künzel, S.; Schmitz, R. A.
2015-08-01
The eastern tropical North Atlantic (ETNA) is characterized by a highly productive coastal upwelling system and a moderate oxygen minimum zone with lowest open ocean oxygen (O2) concentrations of around 40 μmol kg-1. Only recently, the discovery of re-occurring mesoscale eddies with sometimes close to anoxic O2 concentrations (<1 μmol kg-1) and located just below the mixed layer challenged our understanding of O2 distribution and biogeochemical processes in this area. Here, we present the first metagenomic dataset from a deoxygenated anticyclonic modewater eddy in the open waters of the ETNA. In the eddy, we observed a significantly lower bacterial diversity compared to surrounding waters, along with a significant community shift. We detected enhanced primary productivity in the surface layer of the eddy indicated by elevated chlorophyll concentrations and increased carbon uptake rates up to three times as high as in surrounding waters. Carbon uptake below the euphotic zone correlated to the presence of a specific high-light ecotype of Prochlorococcus, which is usually underrepresented in the ETNA. Our combined data indicate that high primary production in the eddy fuels export production and the presence of a specific microbial community responsible for enhanced respiration at shallow depths, below the mixed layer base. Progressively decreasing O2 concentrations in the eddy were found to promote transcription of the key gene for denitrification, nirS, in the O2-depleted core waters. This process is usually absent from the open ETNA waters. In the light of future ocean deoxygenation our results show exemplarily that even distinct events of anoxia have the potential to alter microbial community structures and with that critically impact primary productivity and biogeochemical processes of oceanic water bodies.
NASA Astrophysics Data System (ADS)
Löscher, C. R.; Fischer, M. A.; Neulinger, S. C.; Fiedler, B.; Philippi, M.; Schütte, F.; Singh, A.; Hauss, H.; Karstensen, J.; Körtzinger, A.; Künzel, S.; Schmitz, R. A.
2015-12-01
The eastern tropical North Atlantic (ETNA) is characterized by a highly productive coastal upwelling system and a moderate oxygen minimum zone with lowest open-ocean oxygen (O2) concentrations of approximately 40 μmol kg-1. The recent discovery of re-occurring mesoscale eddies with close to anoxic O2 concentrations (< 1 μmol kg-1) located just below the mixed layer has challenged our understanding of O2 distribution and biogeochemical processes in this area. Here, we present the first microbial community study from a deoxygenated anticyclonic modewater eddy in the open waters of the ETNA. In the eddy, we observed significantly lower bacterial diversity compared to surrounding waters, along with a significant community shift. We detected enhanced primary productivity in the surface layer of the eddy indicated by elevated chlorophyll concentrations and carbon uptake rates of up to three times as high as in surrounding waters. Carbon uptake rates below the euphotic zone correlated to the presence of a specific high-light ecotype of Prochlorococcus, which is usually underrepresented in the ETNA. Our data indicate that high primary production in the eddy fuels export production and supports enhanced respiration in a specific microbial community at shallow depths, below the mixed-layer base. The transcription of the key functional marker gene for dentrification, nirS, further indicated a potential for nitrogen loss processes in O2-depleted core waters of the eddy. Dentrification is usually absent from the open ETNA waters. In light of future projected ocean deoxygenation, our results show that even distinct events of anoxia have the potential to alter microbial community structure with critical impacts on primary productivity and biogeochemical processes of oceanic water bodies.
Primary and secondary carbonaceous species in the atmosphere of Western Riverside County, California
NASA Astrophysics Data System (ADS)
Na, Kwangsam; Sawant, Aniket A.; Song, Chen; Cocker, David R.
Elemental carbon (EC), organic carbon (OC) and PM 2.5 mass concentrations were measured from September 2001 through January 2002 in Mira Loma, CA. EC and OC were analyzed using the NIOSH (National Institute of Occupational Safety and Health) 5040 thermal/optical transmittance method. OC concentrations in Mira Loma were found to be higher than those of other urban sites in the South Coast Air Basin (SoCAB), while EC concentrations were comparable to or lower than those of other SoCAB sites. Overall, OC and EC concentrations accounted for 26% and 5% of the total PM 2.5, respectively. OC/EC ratios ranged from 1.6 to 12.8 with an average of 5.2. These values were higher than those observed at other urban sites in the United States by a factor of 2. A stronger correlation between suspended OC and EC concentrations was noted in months with lower photochemical activity (December and January, r=0.82) than in months with greater photochemical activity (September and October, r=0.64). The elevated levels of OC, OC/EC ratios, and the seasonal difference in correlation between OC and EC concentrations were attributed in part to significant secondary organic aerosol formation. The fraction of total organic carbon that was secondary organic carbon (SOC) was estimated using the OC/EC minimum ratio method and Chemical Mass Balance (CMB) modeling. Based on the OC/EC minimum ratio method, the contribution of SOC to the total organic carbon tended to be higher during the months with greater photochemical activity (63%) than those with lower photochemical activity (44%). Based on CMB modeling, SOC contributed to 14% of the total PM 2.5 mass and 57% of the total organic carbon during the study period. Overall, these findings suggest that photochemical activity can appreciably affect total PM 2.5 mass concentrations in Mira Loma, and that measures to control emissions of SOC precursors incorporated as part of a region-wide air quality management plan could lead to a perceptible drop in total PM 2.5 mass concentrations in this area.
Buyon, Jill; Furie, Richard; Putterman, Chaim; Ramsey-Goldman, Rosalind; Kalunian, Kenneth; Barken, Derren; Conklin, John; Dervieux, Thierry
2016-01-01
The relationship between cell-bound complement activation products (CB-CAPs: EC4d, EC3d), anti-C1q, soluble complement C3/C4 and disease activity in systemic lupus erythematosus (SLE) was evaluated. Per protocol, at baseline all SLE subjects enrolled in this longitudinal study presented with active disease and elevated CB-CAPs. At each monthly visit, the non-serological (ns) Safety of Estrogens in Lupus Erythematosus: National Assessment (SELENA-SLEDAI) and the British Isles Lupus Assessment Group (BILAG)-2004 index scores were determined as was a random urinary protein to creatinine ratio (uPCR). Short-form 36 (SF-36) questionnaires were also collected. All soluble markers were determined using immunoassays, while EC4d and EC3d were determined using flow cytometry. Statistical analysis consisted of linear mixed models with random intercept and fixed slopes. A total of 36 SLE subjects (mean age 34 years; 94% female) were enrolled and evaluated monthly for an average 11 visits per subject. Clinical improvements were observed during the study, with significant decreases in ns-SELENA-SLEDAI scores, BILAG-2004 index scores and uPCR, and increases in all domains of SF-36 (p<0.01). The longitudinal decrease in ns-SELENA-SLEDAI and BILAG-2004 index scores was significantly associated with reduced EC4d and EC3d levels, reduced anti-C1q titres and increased serum complement C3/C4 (p<0.05). The changes in uPCR significantly correlated with C3, C4, anti-C1q and EC4d, with EC4d outperforming C3/C4 by a multivariate analysis. The reduced EC4d or EC3d was associated with improvements in at least six out of the eight domains of SF-36 and outperformed C3/C4. Anti-dsDNA titres did not correlate with changes in disease activity. These data indicate that CB-CAPs and anti-C1q are helpful in monitoring patients with SLE.
Integrated and spectral energetics of the GLAS general circulation model
NASA Technical Reports Server (NTRS)
Tenenbaum, J.
1981-01-01
Integrated and spectral error energetics of the Goddard Laboratory for Atmospheric Sciences (GLAS) general circulation model are compared with observations for periods in January 1975, 1976, and 1977. For two cases the model shows significant skill in predicting integrated energetics quantities out to two weeks, and for all three cases, the integrated monthly mean energetics show qualitative improvements over previous versions of the model in eddy kinetic energy and barotropic conversions. Fundamental difficulties remain with leakage of energy to the stratospheric level. General circulation model spectral energetics predictions are compared with the corresponding observational spectra on a day by day basis. Eddy kinetic energy can be correct while significant errors occur in the kinetic energy of wavenumber three. Single wavenumber dominance in eddy kinetic energy and the correlation of spectral kinetic and potential energy are demonstrated.
Integrating water and carbon fluxes at the ecosystem scale across African ecosystems
NASA Astrophysics Data System (ADS)
Merbold, Lutz; Brümmer, Christian; Archibald, Sally; Ardö, Jonas; Arneth, Almut; Brüggemann, Nicolas; de Grandcourt, Agnes; Kergoat, Laurent; Moffat, Antje M.; Mougin, Eric; Nouvellon, Yann; Saint-Andre, Laurent; Saunders, Matthew; Scholes, Robert J.; Veenendaal, Elmar; Kutsch, Werner L.
2013-04-01
In this study we report on water and carbon dioxide fluxes, measured using the eddy covariance (EC) technology, from different ecosystems in Sub-Saharan Africa. These sites differed in ecosystem type (C3 plant dominated woodlands to C4 plant dominated grass savannas) and covered the very dry regions of the Sahel (250 mm rainfall, Sudan), the tropical areas in Central Africa (1650 mm in Uganda) further south to the subtropical areas in Botswana, Zambia and South Africa (400-900 mm in precipitation). The link between water and carbon dioxide fluxes were evaluated for time periods (see also the corresponding abstract by Bruemmer et al.) without water limitation during the peak growing season. Our results show that plant stomata control ecosystem scale water and carbon dioxide fluxes and mediate between plant growth and plant survival. On continental scale, this switch between maximizing carbon uptake and minimizing water losses, from here on called the "Carbon-Water-Tipping Point" was positively correlated to the mean annual growing season temperature at each site. Even though similar responses of plants were shown at the individual leaf-level scale this has to our knowledge not yet been shown at the ecosystem scale further suggesting a long-term adaptation of the complete ecosystems to certain climatic regions. It remains unclear how this adaption will influence the ecosystem response to ongoing climate change and according temperature increases and changes in precipitation.
NASA Astrophysics Data System (ADS)
Xu, Feinan; Wang, Weizhen; Wang, Jiemin; Xu, Ziwei; Qi, Yuan; Wu, Yueru
2017-08-01
The determination of area-averaged evapotranspiration (ET) at the satellite pixel scale/model grid scale over a heterogeneous land surface plays a significant role in developing and improving the parameterization schemes of the remote sensing based ET estimation models and general hydro-meteorological models. The Heihe Watershed Allied Telemetry Experimental Research (HiWATER) flux matrix provided a unique opportunity to build an aggregation scheme for area-averaged fluxes. On the basis of the HiWATER flux matrix dataset and high-resolution land-cover map, this study focused on estimating the area-averaged ET over a heterogeneous landscape with footprint analysis and multivariate regression. The procedure is as follows. Firstly, quality control and uncertainty estimation for the data of the flux matrix, including 17 eddy-covariance (EC) sites and four groups of large-aperture scintillometers (LASs), were carefully done. Secondly, the representativeness of each EC site was quantitatively evaluated; footprint analysis was also performed for each LAS path. Thirdly, based on the high-resolution land-cover map derived from aircraft remote sensing, a flux aggregation method was established combining footprint analysis and multiple-linear regression. Then, the area-averaged sensible heat fluxes obtained from the EC flux matrix were validated by the LAS measurements. Finally, the area-averaged ET of the kernel experimental area of HiWATER was estimated. Compared with the formerly used and rather simple approaches, such as the arithmetic average and area-weighted methods, the present scheme is not only with a much better database, but also has a solid grounding in physics and mathematics in the integration of area-averaged fluxes over a heterogeneous surface. Results from this study, both instantaneous and daily ET at the satellite pixel scale, can be used for the validation of relevant remote sensing models and land surface process models. Furthermore, this work will be extended to the water balance study of the whole Heihe River basin.
NASA Astrophysics Data System (ADS)
Wu, Z. Y.; Zhang, L.; Wang, X. M.; Munger, J. W.
2015-07-01
Small pollutant concentration gradients between levels above a plant canopy result in large uncertainties in estimated air-surface exchange fluxes when using existing micrometeorological gradient methods, including the aerodynamic gradient method (AGM) and the modified Bowen ratio method (MBR). A modified micrometeorological gradient method (MGM) is proposed in this study for estimating O3 dry deposition fluxes over a forest canopy using concentration gradients between a level above and a level below the canopy top, taking advantage of relatively large gradients between these levels due to significant pollutant uptake in the top layers of the canopy. The new method is compared with the AGM and MBR methods and is also evaluated using eddy-covariance (EC) flux measurements collected at the Harvard Forest Environmental Measurement Site, Massachusetts, during 1993-2000. All three gradient methods (AGM, MBR, and MGM) produced similar diurnal cycles of O3 dry deposition velocity (Vd(O3)) to the EC measurements, with the MGM method being the closest in magnitude to the EC measurements. The multi-year average Vd(O3) differed significantly between these methods, with the AGM, MBR, and MGM method being 2.28, 1.45, and 1.18 times that of the EC, respectively. Sensitivity experiments identified several input parameters for the MGM method as first-order parameters that affect the estimated Vd(O3). A 10% uncertainty in the wind speed attenuation coefficient or canopy displacement height can cause about 10% uncertainty in the estimated Vd(O3). An unrealistic leaf area density vertical profile can cause an uncertainty of a factor of 2.0 in the estimated Vd(O3). Other input parameters or formulas for stability functions only caused an uncertainly of a few percent. The new method provides an alternative approach to monitoring/estimating long-term deposition fluxes of similar pollutants over tall canopies.
Vasilchenko, Alexey S; Yuryev, Mikhail; Ryazantsev, Dmitry Yu; Zavriev, Sergey K; Feofanov, Alexey V; Grishin, Eugene V; Rogozhin, Eugene A
2016-11-01
An interaction of recombinant hairpin-like cationic peptide EcAMP1 with conidia of plant pathogenic fungus Fusarium solani at the cellular level was studied by a combination of microscopic methods. EcAMP1 is from barnyard grass (Echinochloa crusgalli L.), and obtained by heterologous expression in Escherichia coli system. As a result, a direct relationship between hyphal growth inhibition and increasing active peptide concentration, time of incubation and fungal physiological condition has been determined. Dynamics of accumulation and redistribution of the peptide studied on fungal cellular cover and inside the conidia cells has been shown. The dynamics are dependent on time of coupling, as well as, a dissimilarity of EcAMP1 binding with cover of fungal conidia and its stepwise accumulation and diffuse localization in the cytoplasm. Correlation between structural disruption of fungal conidia and the presence of morphological changes has also been found. The correlation was found under the influence of peptide high concentrations at concentrations above 32 μM. The results indicate the presence of a binding of EcAMP1 with the surface of fungal conidia, thus, demonstrating a main specificity for its antifungal action at the cellular level. These results, however, cannot exclude the existence of attendant EcAMP1 action based on its intracellular localization on some specific targets. SCANNING 38:591-598, 2016. © 2016 Wiley Periodicals, Inc. © Wiley Periodicals, Inc.
Ikegami, Kengo; Tagawa, Kozo; Osawa, Takashi
2006-09-01
To determine the usefulness of monkey as an animal model, bioavailability and in vivo release behaviors of theophylline (TP) after oral administration of controlled-release beads in dogs, monkeys, and minipigs were evaluated. Controlled-release beads were prepared using a centrifugal-fluid type granulator, that is, CF-granulator, and Ethylcellulose (EC) was used as controlled-release coating agent. Aqueous solution and EC-coated beads, which contained TP were orally administered to animals after at least 1-week intervals. In dogs and minipigs, their relative bioavailabilities of EC-coated beads were 33.1% and 47.0%, respectively, and in vivo TP release from EC-coated beads in the gastrointestinal tract of dogs and minipigs were not reflected in vitro data. In monkeys, relative bioavailability of EC-coated beads was 80.0% and the highest among the three species, and release amount of TP from EC-coated beads at 24 h after oral administration was 82.8% and 92.4%, which was almost correlated to in vitro data. Therefore, the discrepancy of the relative bioavailability in three species is considered to be due to the difference of in vivo release behavior of TP. The monkey may be useful animal model for bioavailability studies of controlled-release dosage forms of TP from the viewpoint of in vitro-in vivo release correlation. (c) 2006 Wiley-Liss, Inc. and the American Pharmacists Association.
On the cyclonic eddy generation in Panay Strait, Philippines
NASA Astrophysics Data System (ADS)
Flament, P. J.; Repollo, C. L. A.; Flores-vidal, X.; Villanoy, C.
2016-12-01
High Frequency Doppler Radar (HFDR), shallow pressure gauges and Acoustic Doppler Current Profiler (ADCP) time-series observations during the Philippine Straits Dynamics Experiment (PhilEx) were analyzed to describe the mesoscale currents in Panay Strait, Philippines. Low frequency surface currents inferred from three HFDR (July 2008 { July 2009), revealed a clear seasonal signal in concurrent with the reversal of the Asian monsoon. The mesoscale cyclonic eddy west of Panay Island is generated during the winter northeast (NE) monsoon. This causes changes in the strength, depth and width of the intra-seasonal Panay coastal jet as its eastern limb. Winds from QuikSCAT satellite and from a nearby airport indicate that these flow structures correlate with the strength and direction of the prevailing local wind. An intensive survey of the cyclonic eddy in February 8-9, 2009, obtaining a 24-hour successive cross-shore Conductivity-Temperature- Depth (CTD) sections in conjunction with shipboard ADCP measurements showed a well- developed cyclonic eddy characterized by near-surface velocities reaching 50 cm/s. This observation coincides with the intensification of the wind in between Mindoro and Panay islands generating a positive wind stress curl in the lee of Panay, which in turn induces divergent surface currents. Water column response from the mean transects showed a pronounced signal of upwelling, indicated by the doming of isotherms and isopycnals. A pressure gradient then was sets up, resulting in the spin-up of a cyclonic eddy in geostrophic balance. Evaluation of the surface vorticity balance equation suggests that the wind stress curl via Ekman pumping mechanism provides the necessary input in the formation and evolution of the cyclonic eddy. In particular, the cumulative effect of the wind stress curl plays a key role on the generation of the eddy. The Beta-effect on the other hand may led to propagation of the eddy westward.
USDA-ARS?s Scientific Manuscript database
We previously have shown that plasma concentrations of endocannabinoids (EC) are positively correlated with feed efficiency and leaner carcasses in finishing steers. However, whether the animal growth during the finishing period affects the concentration of EC is unknown. The objective of this study...
Nguyen, D Duc; Ngo, H Hao; Guo, W; Nguyen, T Thanh; Chang, Soon W; Jang, A; Yoon, Yong S
2016-09-01
This paper evaluated a novel pilot scale electrocoagulation (EC) system for improving total phosphorus (TP) removal from municipal wastewater. This EC system was operated in continuous and batch operating mode under differing conditions (e.g. flow rate, initial concentration, electrolysis time, conductivity, voltage) to evaluate correlative phosphorus and electrical energy consumption. The results demonstrated that the EC system could effectively remove phosphorus to meet current stringent discharge standards of less than 0.2mg/L within 2 to 5min. This target was achieved in all ranges of initial TP concentrations studied. It was also found that an increase in conductivity of solution, voltages, or electrolysis time, correlated with improved TP removal efficiency and reduced specific energy consumption. Based on these results, some key economic considerations, such as operating costs, cost-effectiveness, product manufacturing feasibility, facility design and retrofitting, and program implementation are also discussed. This EC process can conclusively be highly efficient in a relatively simple, easily managed, and cost-effective for wastewater treatment system. Copyright © 2016 Elsevier B.V. All rights reserved.
NASA Astrophysics Data System (ADS)
Wu, Cheng; Huang, X. H. Hilda; Ng, Wai Man; Griffith, Stephen M.; Zhen Yu, Jian
2016-09-01
Organic carbon (OC) and elemental carbon (EC) are operationally defined by analytical methods. As a result, OC and EC measurements are protocol dependent, leading to uncertainties in their quantification. In this study, more than 1300 Hong Kong samples were analyzed using both National Institute for Occupational Safety and Health (NIOSH) thermal optical transmittance (TOT) and Interagency Monitoring of Protected Visual Environment (IMPROVE) thermal optical reflectance (TOR) protocols to explore the cause of EC disagreement between the two protocols. EC discrepancy mainly (83 %) arises from a difference in peak inert mode temperature, which determines the allocation of OC4NSH, while the rest (17 %) is attributed to a difference in the optical method (transmittance vs. reflectance) applied for the charring correction. Evidence shows that the magnitude of the EC discrepancy is positively correlated with the intensity of the biomass burning signal, whereby biomass burning increases the fraction of OC4NSH and widens the disagreement in the inter-protocol EC determination. It is also found that the EC discrepancy is positively correlated with the abundance of metal oxide in the samples. Two approaches (M1 and M2) that translate NIOSH TOT OC and EC data into IMPROVE TOR OC and EC data are proposed. M1 uses direct relationship between ECNSH_TOT and ECIMP_TOR for reconstruction: M1 : ECIMP_TOR = a × ECNSH_TOT + b; while M2 deconstructs ECIMP_TOR into several terms based on analysis principles and applies regression only on the unknown terms: M2 : ECIMP_TOR = AECNSH + OC4NSH - (a × PCNSH_TOR + b), where AECNSH, apparent EC by the NIOSH protocol, is the carbon that evolves in the He-O2 analysis stage, OC4NSH is the carbon that evolves at the fourth temperature step of the pure helium analysis stage of NIOSH, and PCNSH_TOR is the pyrolyzed carbon as determined by the NIOSH protocol. The implementation of M1 to all urban site data (without considering seasonal specificity) yields the following equation: M1(urban data) : ECIMP_TOR = 2.20 × ECNSH_TOT - 0.05. While both M1 and M2 are acceptable, M2 with site-specific parameters provides the best reconstruction performance. Secondary OC (SOC) estimation using OC and EC by the two protocols is compared. An analysis of the usability of reconstructed ECIMP_TOR and OCIMP_TOR suggests that the reconstructed values are not suitable for SOC estimation due to the poor reconstruction of the OC / EC ratio.
Xiao, Min; Ge, Haitao; Khundrakpam, Budhachandra S.; Xu, Junhai; Bezgin, Gleb; Leng, Yuan; Zhao, Lu; Tang, Yuchun; Ge, Xinting; Jeon, Seun; Xu, Wenjian; Evans, Alan C.; Liu, Shuwei
2016-01-01
Functional neuroimaging studies have indicated the involvement of separate brain areas in three distinct attention systems: alerting, orienting, and executive control (EC). However, the structural correlates underlying attention remains unexplored. Here, we utilized graph theory to examine the neuroanatomical substrates of the three attention systems measured by attention network test (ANT) in 65 healthy subjects. White matter connectivity, assessed with diffusion tensor imaging deterministic tractography was modeled as a structural network comprising 90 nodes defined by the automated anatomical labeling (AAL) template. Linear regression analyses were conducted to explore the relationship between topological parameters and the three attentional effects. We found a significant positive correlation between EC function and global efficiency of the whole brain network. At the regional level, node-specific correlations were discovered between regional efficiency and all three ANT components, including dorsolateral superior frontal gyrus, thalamus and parahippocampal gyrus for EC, thalamus and inferior parietal gyrus for alerting, and paracentral lobule and inferior occipital gyrus for orienting. Our findings highlight the fundamental architecture of interregional structural connectivity involved in attention and could provide new insights into the anatomical basis underlying human behavior. PMID:27777556
The Seed Semipermeable Layer and Its Relation to Seed Quality Assessment in Four Grass Species.
Lv, Yan Y; He, Xue Q; Hu, Xiao W; Wang, Yan R
2017-01-01
The existence of a semipermeable layer in grass seeds has been extensively reported, yet knowledge of its influence on tests for seed viability and vigor that depend upon measurement of electrical conductivity (EC) is limited. This study determined the presence and location of the semipermeable layer, and its relation to seed viability and vigor assessment, in seeds of four important grass species- Elymus nutans Griseb., Lolium perenne L., Leymus chinensis (Trin.) Tzvel., and Avena sativa L. Intact seeds of E. nutans, Lolium perenne , and Leymus chinensis exhibited little staining with triphenyl tetrazolium chloride (TTC), and there were no differences in EC between seeds with different germination percentage (GP) ( P > 0.05). After piercing the seed coat, however, all three species displayed positive staining with TTC, along with a significant negative correlation between EC and GP ( E. nutans : R 2 = 0.7708; Lolium perenne : R 2 = 0.8414; Leymus chinensis : R 2 = 0.859; P < 0.01). In contrast, both intact and pierced seeds of A. sativa possessed a permeable seed coat that showed positive staining with TTC and EC values that were significantly negatively correlated with GP [ R 2 = 0.9071 (intact) and 0.9597 (pierced); P < 0.01]. In commercial seed lots of A. sativa , a field emergence test indicated that EC showed a significant negative correlation with field emergence at two sowing dates ( R 2 = 0.6069, P < 0.01 and 0.5316, P < 0.05). Analysis of seed coat permeability revealed the presence of a semipermeable layer located in the seed coat adjacent to the endosperm in E. nutans, Lolium perenne , and Leymus chinensis ; however, no semipermeable layer was observed in A. sativa. This is the first report of the absence of a semipermeable layer in a grass species. The existence of a semipermeable layer is one of the most important factors affecting seed viability and vigor testing (based on EC measurement) in E. nutans, Lolium perenne , and Leymus chinensis . Increasing the permeability of the semipermeable layer, e.g., by piercing the seed coat, may permit the use of EC measurement to assess seed vigor in species that possess such a layer.
Hennigan, Christopher J; Bergin, Michael H; Weber, Rodney J
2008-12-15
Ground-based measurements of meteorological parameters and water-soluble organic carbon in the gas(WSOCg) and particle (WSOCp) phases were carried out in Atlanta, Georgia, from May to September 2007. Fourteen separate events were observed throughout the summer in which WSOCp and water vapor concentrations were highly correlated (average WSOCp-water vapor r = 0.92); however, for the entire summer, no well-defined relationship existed between the two. The correlation events, which lasted on average 19 h, were characterized by a wide range of WSOCp and water vapor concentrations. Several hypotheses for the correlation are explored, including heterogeneous liquid phase SOA formation and the co-emission of biogenic VOCs and water vapor. The data provide supporting evidence for contributions from both and suggest the possibility of a synergistic effect between the co-emission of water vapor and VOCs from biogenic sources on SOA formation. Median WSOCp concentrations were also correlated with elemental carbon (EC), although this correlation extended over the entire summer. Despite the emission of water vapor from anthropogenic mobile sources and the WSOCp-EC correlation, mobile sources were not considered a potential cause for the WSOCp-water vapor correlations because of their low contribution to the water vapor budget. Meteorology could perhaps have influenced the WSOCp-EC correlation, but other factors are implicated as well. Overall, the results suggest that the temperature-dependent co-emission of water vapor through evapotranspiration and SOA precursor-VOCs by vegetation may be an important process contributing to SOA in some environments.
Luo, Xiao; Li, Kaicheng; Jia, Y L; Zeng, Qingze; Jiaerken, Yeerfan; Qiu, Tiantian; Huang, Peiyu; Xu, Xiaojun; Shen, Zhujing; Guan, Xiaojun; Zhou, Jiong; Wang, Chao; Xu, J J; Zhang, Minming
2018-03-17
The APOE ε4 allele is associated with impaired intrinsic functional connectivity in neural networks, especially in the default mode network (DMN). However, effective connectivity (EC) reflects the direct causal effects of one brain region to another, which has rarely been investigated. Recently, Granger causality analysis (GCA) proved suitable for the study of directionality in neuronal interactions. Using GCA, we examined the differences in the EC between the anterior medial prefrontal cortex/posterior cingulate cortex (aMPFC/PCC) and the whole brain in 17 ε4 carrying and 32 non-carrying cognitively intact elderly individuals. Furthermore, correlation analyses were performed between the abnormal EC and cognition/neuropathological indices. Compared with the non-carriers, the results showed that the ε4 carriers exhibited decreased EC from the PCC to the whole brain in the middle temporal gyrus (MTG), the anterior cingulate cortex (ACC), and the precuneus (PCu). Meanwhile, the ε4 carriers demonstrated increased EC from the whole brain to the aMPFC in the inferior parietal lobe (IPL) and the postcentral gyrus (PCG). The correlation analyses suggested that the EC from the IPL/PCG to the aMPFC was related to episodic memory in non-carriers, while the decreased EC from the PCC to the ACC was associated with increased levels of t-tau in the ε4 carriers. In ε4 carriers, a negative influence can be traced from the PCC to both the anterior and posterior DMN subsystems; meanwhile, the anterior DMN subsystem receives compensatory effects from the parietal cortex. Early increases in AD-related pathologies in the PCC may act as first factors during this pathological process.
miR-145 targets the SOX11 3’UTR to suppress endometrial cancer growth
Chang, Lei; Yuan, Zhongfu; Shi, Huirong; Bian, Yangyang; Guo, Ruixia
2017-01-01
To explore the functions of SOX (Sex determining Region Y-related HMG-box) family genes in endometrial cancer (EC) and determine the influence of miR-145/SOX11 on EC cell functions. The relationship between miR-145 and SOX11 was confirmed using TargetScan, miRNA databases and dual-luciferase reporter gene assays. The expression of SOX11 mRNA in tissue specimens was examined using RT-qPCR, while SOX11 protein expression in tissues and cell lines were detected through immunohistochemistry (IHC) and western blotting. After transfection using Lipofectamine 2000, the proliferation, migration, invasion and apoptosis of ECC-1 and HEC-1-A cells were assessed through colony formation, transwell and flow cytometry assays. The correlation of SOX11 expression with the prognosis outcomes of patients was analyzed using Kaplan-Meier analysis and the log-rank test. SOX11 showed high expression in EC, which is negatively correlated with a poor prognostic outcome of EC patients. The expression of miR-145 was lower in EC tissues than in adjacent tissues. MiR-145 significantly reduced the expression of SOX11. In ECC-1 cells, miR-145 suppressed the propagation, migration, and invasion of cells and promoted cell apoptosis. MiR-145 also inhibited the proliferation, migration, and invasion of HEC-1-A cells and facilitated cell apoptosis by inhibiting SOX11. MiR-145 targeted site 3 (3615) of the SOX11 3’UTR to affect the expression of SOX11. MiR-145 and its target gene SOX11 could serve as diagnostic markers for EC. MiR-145 targets the SOX11 3’UTR to inhibit its expression and suppress the propagation and metastasis of EC cells. PMID:29218252
A Study of the Southern Ocean: Mean State, Eddy Genesis & Demise, and Energy Pathways
NASA Astrophysics Data System (ADS)
Zajaczkovski, Uriel
The Southern Ocean (SO), due to its deep penetrating jets and eddies, is well-suited for studies that combine surface and sub-surface data. This thesis explores the use of Argo profiles and sea surface height ( SSH) altimeter data from a statistical point of view. A linear regression analysis of SSH and hydrographic data reveals that the altimeter can explain, on average, about 35% of the variance contained in the hydrographic fields and more than 95% if estimated locally. Correlation maxima are found at mid-depth, where dynamics are dominated by geostrophy. Near the surface, diabatic processes are significant, and the variance explained by the altimeter is lower. Since SSH variability is associated with eddies, the regression of SSH with temperature (T) and salinity (S) shows the relative importance of S vs T in controlling density anomalies. The AAIW salinity minimum separates two distinct regions; above the minimum density changes are dominated by T, while below the minimum S dominates over T. The regression analysis provides a method to remove eddy variability, effectively reducing the variance of the hydrographic fields. We use satellite altimetry and output from an assimilating numerical model to show that the SO has two distinct eddy motion regimes. North and south of the Antarctic Circumpolar Current (ACC), eddies propagate westward with a mean meridional drift directed poleward for cyclonic eddies (CEs) and equatorward for anticyclonic eddies (AEs). Eddies formed within the boundaries of the ACC have an effective eastward propagation with respect to the mean deep ACC flow, and the mean meridional drift is reversed, with warm-core AEs propagating poleward and cold-core CEs propagating equatorward. This circulation pattern drives downgradient eddy heat transport, which could potentially transport a significant fraction (24 to 60 x 1013 W) of the net poleward ACC eddy heat flux. We show that the generation of relatively large amplitude eddies is not a ubiquitous feature of the SO but rather a phenomenon that is constrained to five isolated, well-defined "hotspots". These hotspots are located downstream of major topographic features, with their boundaries closely following f/H contours. Eddies generated in these locations show no evidence of a bias in polarity and decay within the boundaries of the generation area. Eddies tend to disperse along f/H contours rather than following lines of latitude. We found enhanced values of both buoyancy (BP) and shear production (SP) inside the hotspots, with BP one order of magnitude larger than SP. This is consistent with baroclinic instability being the main mechanism of eddy generation. The mean potential density field estimated from Argo floats shows that inside the hotspots, isopycnal slopes are steep, indicating availability of potential energy. The hotspots identified in this thesis overlap with previously identified regions of standing meanders. We provide evidence that hotspot locations can be explained by the combined effect of topography, standing meanders that enhance baroclinic instability, and availability of potential energy to generate eddies via baroclinic instabilities.
[Diagnostic values of salivary versus and plasma microRNA-21 for early esophageal cancer].
Ye, Minhua; Ye, Penghui; Zhang, Weizhu; Rao, Jiaqi; Xie, Zijun
2014-06-01
To evaluate the diagnostic value of salivary and plasma miR-21 in patients with esophageal cancer (EC). Total RNA was extracted from saliva and plasma samples from 50 stage I and 50 stage II patients with EC and 50 healthy controls for measurement of miR-21 levels using qPCR. The diagnostic values of salivary and plasma miR-21 levels were assessed for stage I, stage II, and stage I+II EC. Salivary and plasma miR-21 were significantly higher in the EC patients than in the control group. The diagnostic sensitivities of plasma miR-21 for stage I, stage II, and stage I+II EC were 96%, 64% and 97%, with specificities of 44%, 84%, and 56%, respectively; the sensitivities of salivary miR-21 were 90%, 88%, and 89%, respectively, with the same specificities of 64%. Regardless of EC staging, the expression of plasma miR-21 showed a significant positive correlation with that of salivary miR-21, and their diagnostic values were comparable. Both salivary and plasmatic miR-21 can be sensitive biomarkers for EC, and salivary miR-21 detection has the potential to replace plasma detection for EC diagnosis.
Ye, Peng; Qu, Chang-Fa; Hu, Xue-Lin
2016-05-01
The aim of this study is to investigate IGF-1, IGF-1R, and IGFBP-3 methylations in esophageal carcinoma (EC) patients and their relationship with the development and prognosis of EC. This study population consisted of 264 patients (case group) whom EC radical resection was performed and 283 healthy individuals (control group). Methylation-specific PCR (MSP) detected the methylation status of IGF-1, IGF-1R, and IGFBP-3 in the peripheral blood in both groups. The expressions of IGF-1, IGF-1R, and IGFBP-3 in EC and adjacent normal tissues were detected by immunohistochemistry (IHC). The methylation rates of IGF-1, IGF-1R, IGFBP3, and IGF-1 + IGF1R + IGFBP3 in the case group were higher than those in the control group (all P < 0.05). Additionally, there were statistical significances for the methylation rates of IGF-1, IGF-1R, IGFBP3, and IGF-1 + IGF1R + IGFBP3 IGF-1 among patients of different clinicopathological features (all P < 0.05). The positive expression rates of IGF-1 and IGF-1R in EC were significantly higher than those in adjacent normal tissues (both P < 0.001), and the rate of IGFBP-3 in EC was significantly lower than that in adjacent normal tissues (P < 0.05). Correlation analysis showed that IGF-1 and IGF1R gene promoter methylation was positively correlated with the positive expressions of IGF-1 (r = 0.139, P = 0.024) and IGF-1R (r = 0.135, P = 0.028), while the IGFBP3 methylation was negatively correlated with the positive expression of IGFBP3 (r = -0.133, P = 0.031). The positive expressions of IGF-1, IGF-1R, and IGFBP-3 were related to different clinicopathological features (all P < 0.05). Cox multivariate analysis results showed that methylation status of IGF-1, IGF-1R, and IGF-1 + IGF1R + IGFBP3 ; expressions of IGF-1 and IGF-1R protein; infiltration depth; and lymph node metastasis (LNM) were independent factors of EC prognosis. Our study demonstrated that methylation of IGF-1, IGF1R, IGFBP3, and IGF-1 + IGF1R + IGFBP3 was closely linked with the occurrence of EC and patients' clinicopathological features. Besides, the methylation status of the target genes and the expressions of IGF-1 and IGF-1R protein were independent factors of EC prognosis, which could provide a direction for the prognosis and treatment of EC.
Wind-induced upwelling in the Kerguelen Plateau region
NASA Astrophysics Data System (ADS)
Gille, S. T.; Carranza, M. M.; Cambra, R.
2014-11-01
In contrast to most of the Southern Ocean, the Kerguelen Plateau supports an unusually strong spring chlorophyll (Chl a) bloom, likely because the euphotic zone in the region is supplied with higher iron concentrations. This study uses satellite wind, sea surface temperature (SST), and ocean color data to explore the impact of wind-driven processes on upwelling of cold (presumably iron-rich) water to the euphotic zone. Results show that, in the Kerguelen region, cold SSTs correlate with high wind speeds, implying that wind-mixing leads to enhanced vertical mixing. Cold SSTs also correlate with negative wind-stress curl, implying that Ekman pumping can further enhance upwelling. In the moderate to high eddy kinetic energy (EKE) regions surrounding Kerguelen, we find evidence of coupling between winds and SST gradients associated with mesoscale eddies, which can locally modulate the wind-stress curl. This coupling introduces persistent wind-stress curl patterns and Ekman pumping around these long-lived eddies, which may modulate the evolution of Chl a in the downstream plume far offshore. Close to the plateau, this eddy coupling breaks down. Kerguelen has a significant wind shadow on its downwind side, which changes position depending on the prevailing wind and which generates a wind-stress curl dipole that shifts location depending on wind direction. This leads to locally enhanced Ekman pumping for a few hundred kilometers downstream from the Kerguelen Plateau; Chl a values tend to be more elevated in places where wind-stress curl induces Ekman upwelling than in locations of downwelling, although the estimated upwelling rates are too small for this relationship to derive from direct effects on upward iron supply, and thus other processes, which remain to be determined, must also be involved in the establishment of these correlations. During the October and November (2011) KErguelen Ocean and Plateau compared Study (KEOPS-2) field program, wind conditions were fairly typical for the region, with enhanced Ekman upwelling expected to the north of the Kerguelen Islands.
Fukui, Atsuko; Fujii, Ryuta; Yonezawa, Yorinobu; Sunada, Hisakazu
2007-11-01
In the pharmaceutical preparation of a controlled release drug, it is very important and necessary to understand the release properties. The dissolution test is a very important and useful method for understanding and predicting drug-release properties. It was readily confirmed in the previous paper that the release process could be assessed quantitatively by a combination of the square-root time law and cube-root law equations for ethylcellulose (EC) matrix granules of phenylpropanolamine hydrochloride (PPA). In this paper EC layered granules were used in addition to EC matrix. The relationship between release property and the concentration of PPA in plasma after administration using beagle dogs were examined. Then it was confirmed that the correlativity for EC layered granules and EC matrix were similar each other. Therefore, it was considered that the dissolution test is useful for prediction of changes in concentration of PPA in the blood with time. And it was suggested that EC layered granules were suitable as a controlled release system as well as EC matrix.
Ethyl carbamate induces cell death through its effects on multiple metabolic pathways.
Liu, Huichang; Cui, Bo; Xu, Yi; Hu, Chaoyang; Liu, Ying; Qu, Guorun; Li, Dawei; Wu, Yongning; Zhang, Dabing; Quan, Sheng; Shi, Jianxin
2017-11-01
Ethyl carbamate (EC), a multisite carcinogenic chemical causing tumors in various animal species, is probably carcinogenic to humans. However, information about the possible carcinogenic and toxicological effects of EC in humans is quite limited. Because EC is found in many dietary foods (such as fermented foods) and tobacco and its products, and exposure of humans to EC often occurs inevitably, its toxicological effects in humans need to be studied. This study was conducted to understand the metabolomic and transcriptomic changes in human hepatocellular carcinoma cells (HepG2) exposed to 100 mM EC for short term (4 h) and long term (12 h) period, respectively. The results revealed multiple influences of EC on the metabolome and transcriptome of HepG2 cells, which was exposure time-dependent and well correlated with the kinetic changes of cell viability and mortality. EC treatment affected multiple metabolic pathways, inducing oxidative stress, reducing detoxification capacity, depleting energy, decreasing reducing power, disrupting membrane integrity, and damaging DNA and protein. These metabolomic and transcriptomic biomarkers of EC on human cell metabolism identified in this study would facilitate further studies on the risk assessment and the mitigation of dietary EC. Copyright © 2017 Elsevier B.V. All rights reserved.
[Study on content of ethyl carbamate in yellow rice wine and its change in Zhejiang province].
Shen, Xiang-hong; Wu, Ping-gu; Wang, Li-yuan; Zhang, Jing; Tan, Ying; Ying, Ying; Ma, Bing-jie
2013-11-01
To understand the content status of ethyl carbamate (EC) in yellow rice wine and the changes in storage period and shelf life in Zhejiang province. A total of 475 samples of yellow rice wine purchased randomly from supermarkets and food stores in Zhejiang province during 2008-2012, and 49 samples collected from manufacturers were measured for EC content. The sample collected from manufacturers by filter sterilization was placed at 4 °C, room temperature and 37 °C for 400 d, respectively;a bottled wine and a wine in bag were bought from market were placed for 400 d in room temperature to conduct shelf life storage test, and measure the content in every point in 2011. The EC of the samples was determinated by gas chromatography-mass spectrometry after the samples were diluted with D5-EC isotope dilution technique, and purified by alkaline diatomite solid phase extraction column. The overall detection rate of EC was 99% (472/475) in yellow rice wine of Zhejiang province in 2008-2012, the median value was 70-112 µg/kg, the 90th percentile was 190-333 µg/kg, the 95th percentile was 214-393 µg/kg, and the maximum value was 430-515 µg/kg. The content of EC was increased gradually along with the increasing of storage age in commercially yellow rice wine, and the average content of EC were positively correlated with storage age(r = 0.988). The contents of EC in yellow rice wine after sterilization increased from 74 µg/kg to 86 µg/kg, 127 µg/kg and 509 µg/kg at 4 °C, room temperature and 37°C, respectively for 400 d storage, the differences had statistical significance (F = 14.73, P < 0.01). The content of EC in yellow rice wines in shelf life, which stored in room temperature with bottle and bag package, was decreased slightly with increasing storage time in the beginning, from 215 to 184 µg/kg and 196 to 158 µg/kg, respectively, and increased again with increasing storage time after 250 d, with 252 µg/kg and 210 µg/kg in bottle and bag package after 400 d, respectively, the differences had statistical significance (Z = 2.37, P < 0.05). EC is widespread in rice wine, the content of EC was correlated with storage time and temperature.
Tomlin, Danielle; Moore, David R.; Dillon, Harvey
2015-01-01
Objectives: In this study, the authors assessed the potential utility of a recently developed questionnaire (Evaluation of Children’s Listening and Processing Skills [ECLiPS]) for supporting the clinical assessment of children referred for auditory processing disorder (APD). Design: A total of 49 children (35 referred for APD assessment and 14 from mainstream schools) were assessed for auditory processing (AP) abilities, cognitive abilities, and symptoms of listening difficulty. Four questionnaires were used to capture the symptoms of listening difficulty from the perspective of parents (ECLiPS and Fisher’s auditory problem checklist), teachers (Teacher’s Evaluation of Auditory Performance), and children, that is, self-report (Listening Inventory for Education). Correlation analyses tested for convergence between the questionnaires and both cognitive and AP measures. Discriminant analyses were performed to determine the best combination of tests for discriminating between typically developing children and children referred for APD. Results: All questionnaires were sensitive to the presence of difficulty, that is, children referred for assessment had significantly more symptoms of listening difficulty than typically developing children. There was, however, no evidence of more listening difficulty in children meeting the diagnostic criteria for APD. Some AP tests were significantly correlated with ECLiPS factors measuring related abilities providing evidence for construct validity. All questionnaires correlated to a greater or lesser extent with the cognitive measures in the study. Discriminant analysis suggested that the best discrimination between groups was achieved using a combination of ECLiPS factors, together with nonverbal Intelligence Quotient (cognitive) and AP measures (i.e., dichotic digits test and frequency pattern test). Conclusions: The ECLiPS was particularly sensitive to cognitive difficulties, an important aspect of many children referred for APD, as well as correlating with some AP measures. It can potentially support the preliminary assessment of children referred for APD. PMID:26002277
Senol, Serkan; Sayar, Ilyas; Ceyran, Ayse B; Ibiloglu, Ibrahim; Akalin, Ibrahim; Firat, Ugur; Kosemetin, Duygu; Engin Zerk, Pinar; Aydin, Abdullah
2016-05-01
Epithelial-stroma interactions in the endometrium are known to be responsible for physiological functions and emergence of several pathologic lesions. Periglandular stromal cells act on endometrial cells in a paracrine manner through sex hormones. In this study, we immunohistochemically evaluated the expression of epithelial-mesenchymal transition regulators (SNAIL/SLUG, TWIST, ZEB1), adhesion molecules (β-catenin and E-cadhenin), estrogen (ER)-progesterone (PR) receptor and their correlation with each other in 30 benign, 148 hyperplastic (EH), and 101 endometrioid-type endometrial carcinoma (EC) endometria. In the epithelial component, loss of expression in E-cadherin, ER and PR, and overexpression of TWIST and ZEB1 were significantly higher in EC than in EH (P<0.01). In the periglandular stromal component, β-catenin and SNAIL/SLUG expression were significantly higher in normal endometrium and simple without atypical EH compared with complex atypical EH and EC (P<0.01). In addition, periglandular stromal TWIST expression was significantly higher in EH group compared with EC (P<0.05). There was significantly negative correlation between β-catenin and ER, TWIST and ER, and TWIST and PR in hyperplastic and carcinomatous glandular epithelium, whereas there was a significantly positive correlation between β-catenin and SNAIL-SLUG, β-catenin and TWIST, β-catenin and ER, β-catenin and PR, SNAIL-SLUG and ER, SNAIL-SLUG and PR, TWIST and ER, TWIST and PR, in periglandular/cancer-associated stromal cells (P<0.01). In conclusion, the pattern of positive and negative correlations in the expression of epithelial-mesenchymal transition regulators (SNAIL-SLUG and TWIST), sex hormone receptors (ER and PR), and β-catenin between ECs and hyperplasia, as well as between epithelium and stroma herein, is suggestive of a significant role for these proteins and their underlying molecular processes in the development of endometrial carcinomas.
Sayar, Ilyas; Ceyran, Ayse B.; Ibiloglu, Ibrahim; Akalin, Ibrahim; Firat, Ugur; Kosemetin, Duygu; Engin Zerk, Pinar; Aydin, Abdullah
2016-01-01
Epithelial-stroma interactions in the endometrium are known to be responsible for physiological functions and emergence of several pathologic lesions. Periglandular stromal cells act on endometrial cells in a paracrine manner through sex hormones. In this study, we immunohistochemically evaluated the expression of epithelial-mesenchymal transition regulators (SNAIL/SLUG, TWIST, ZEB1), adhesion molecules (β-catenin and E-cadhenin), estrogen (ER)-progesterone (PR) receptor and their correlation with each other in 30 benign, 148 hyperplastic (EH), and 101 endometrioid-type endometrial carcinoma (EC) endometria. In the epithelial component, loss of expression in E-cadherin, ER and PR, and overexpression of TWIST and ZEB1 were significantly higher in EC than in EH (P<0.01). In the periglandular stromal component, β-catenin and SNAIL/SLUG expression were significantly higher in normal endometrium and simple without atypical EH compared with complex atypical EH and EC (P<0.01). In addition, periglandular stromal TWIST expression was significantly higher in EH group compared with EC (P<0.05). There was significantly negative correlation between β-catenin and ER, TWIST and ER, and TWIST and PR in hyperplastic and carcinomatous glandular epithelium, whereas there was a significantly positive correlation between β-catenin and SNAIL-SLUG, β-catenin and TWIST, β-catenin and ER, β-catenin and PR, SNAIL-SLUG and ER, SNAIL-SLUG and PR, TWIST and ER, TWIST and PR, in periglandular/cancer-associated stromal cells (P<0.01). In conclusion, the pattern of positive and negative correlations in the expression of epithelial-mesenchymal transition regulators (SNAIL-SLUG and TWIST), sex hormone receptors (ER and PR), and β-catenin between ECs and hyperplasia, as well as between epithelium and stroma herein, is suggestive of a significant role for these proteins and their underlying molecular processes in the development of endometrial carcinomas. PMID:26367784
Matrix exponential-based closures for the turbulent subgrid-scale stress tensor.
Li, Yi; Chevillard, Laurent; Eyink, Gregory; Meneveau, Charles
2009-01-01
Two approaches for closing the turbulence subgrid-scale stress tensor in terms of matrix exponentials are introduced and compared. The first approach is based on a formal solution of the stress transport equation in which the production terms can be integrated exactly in terms of matrix exponentials. This formal solution of the subgrid-scale stress transport equation is shown to be useful to explore special cases, such as the response to constant velocity gradient, but neglecting pressure-strain correlations and diffusion effects. The second approach is based on an Eulerian-Lagrangian change of variables, combined with the assumption of isotropy for the conditionally averaged Lagrangian velocity gradient tensor and with the recent fluid deformation approximation. It is shown that both approaches lead to the same basic closure in which the stress tensor is expressed as the matrix exponential of the resolved velocity gradient tensor multiplied by its transpose. Short-time expansions of the matrix exponentials are shown to provide an eddy-viscosity term and particular quadratic terms, and thus allow a reinterpretation of traditional eddy-viscosity and nonlinear stress closures. The basic feasibility of the matrix-exponential closure is illustrated by implementing it successfully in large eddy simulation of forced isotropic turbulence. The matrix-exponential closure employs the drastic approximation of entirely omitting the pressure-strain correlation and other nonlinear scrambling terms. But unlike eddy-viscosity closures, the matrix exponential approach provides a simple and local closure that can be derived directly from the stress transport equation with the production term, and using physically motivated assumptions about Lagrangian decorrelation and upstream isotropy.
NASA Astrophysics Data System (ADS)
Stössel, Achim; von Storch, Jin-Song; Notz, Dirk; Haak, Helmuth; Gerdes, Rüdiger
2018-03-01
This study is on high-frequency temporal variability (HFV) and meso-scale spatial variability (MSV) of winter sea-ice drift in the Southern Ocean simulated with a global high-resolution (0.1°) sea ice-ocean model. Hourly model output is used to distinguish MSV characteristics via patterns of mean kinetic energy (MKE) and turbulent kinetic energy (TKE) of ice drift, surface currents, and wind stress, and HFV characteristics via time series of raw variables and correlations. We find that (1) along the ice edge, the MSV of ice drift coincides with that of surface currents, in particular such due to ocean eddies; (2) along the coast, the MKE of ice drift is substantially larger than its TKE and coincides with the MKE of wind stress; (3) in the interior of the ice pack, the TKE of ice drift is larger than its MKE, mostly following the TKE pattern of wind stress; (4) the HFV of ice drift is dominated by weather events, and, in the absence of tidal currents, locally and to a much smaller degree by inertial oscillations; (5) along the ice edge, the curl of the ice drift is highly correlated with that of surface currents, mostly reflecting the impact of ocean eddies. Where ocean eddies occur and the ice is relatively thin, ice velocity is characterized by enhanced relative vorticity, largely matching that of surface currents. Along the ice edge, ocean eddies produce distinct ice filaments, the realism of which is largely confirmed by high-resolution satellite passive-microwave data.
Zhang, Tao; Zhang, Yangjian; Xu, Mingjie; Zhu, Juntao; Wimberly, Michael C; Yu, Guirui; Niu, Shuli; Xi, Yi; Zhang, Xianzhou; Wang, Jingsheng
2015-10-30
To explore grazing effects on carbon fluxes in alpine meadow ecosystems, we used a paired eddy-covariance (EC) system to measure carbon fluxes in adjacent fenced (FM) and grazed (GM) meadows on the Tibetan plateau. Gross primary productivity (GPP) and ecosystem respiration (Re) were greater at GM than FM for the first two years of fencing. In the third year, the productivity at FM increased to a level similar to the GM site. The higher productivity at GM was mainly caused by its higher photosynthetic capacity. Grazing exclusion did not increase carbon sequestration capacity for this alpine grassland system. The higher optimal photosynthetic temperature and the weakened ecosystem response to climatic factors at GM may help to facilitate the adaption of alpine meadow ecosystems to changing climate.
Anderson, Frank E.; Snyder, R.L.; Paw, U.K.T.; Drexler, Judith Z.
2004-01-01
The methods used to obtain universal cover coefficient (Kc) values for a non-tidal restored wetland in the Sacramento-San Joaquin river delta, US, during the summer of the year 2002 and to investigate possible differences during changing wind patterns are described. A micrometeorological tower over the wetland was established to quantify actual evapotranspiration (ETa) rates and surface energy fluxes for water and energy budget analysis. The eddy-covariance (EC) system was used to measure the surface energy budget data in the period from May 23 to November 6, 2002. The results show that K c values should be lower during westerly than northerly wind events during the midseason period due to the reduced vapor pressure deficit.
Ambient concentrations and insights on organic and elemental carbon dynamics in São Paulo, Brazil
NASA Astrophysics Data System (ADS)
Monteiro dos Santos, Djacinto A.; Brito, Joel F.; Godoy, José Marcus; Artaxo, Paulo
2016-11-01
The São Paulo Metropolitan Area (SPMA) is a megacity with about 20 million people and about 8 million vehicles, most of which are fueled with a significant fraction of ethanol - making it a unique case worldwide. This study presents organic and elemental carbon measurements using thermal-optical analysis from quartz filters collected in four sampling sites within the SPMA. Overall Organic Carbon (OC) concentration was comparable at all sites, where Street Canyon had the highest concentration (3.37 μg m-3) and Park site the lowest (2.65 μg m-3). Elemental Carbon (EC), emitted as result of incomplete combustion, has been significantly higher at the Street Canyon site (6.11 μg m-3) in contrast to all other three sites, ranging from 2.25 μg m-3 (Downtown) to 1.50 μg m-3 (Park). For all sampling sites, the average OC:EC ratio are found on the lower bound (<2) of what is usually observed for other megacities, highlighting the significant contribution of EC in Sao Paulo. At the Street Canyon site, average OC:EC ratio was 0.56, to our knowledge the lowest value ever observed for any urban site. An approach for apportionment between primary and secondary organic carbon based on primary OC:EC ratio was evaluated. The secondary OC was estimated to be 30-40% of total OC concentrations throughout the various sampling sites. The organic carbon dynamics has been further studied using each of the thermally-derived organic carbon fractions. Each of these has been studied regarding their correlation with EC and the correlation between different sites. The analyses have identified that the OC3 and OC4, i.e., the carbon fraction which evolves from the filter at temperatures above 450 °C, presents a regional behavior, with high correlation among all sites. Conversely, OC1, the first fraction to evolve, has depicted a more local characteristic. Furthermore, the fraction of OC which becomes char during the temperature increase under inert atmosphere (the Pyrolytic Carbon-PC) has been the only fraction not to present a significant correlation with EC. Since that EC is assumed to be a primary emission marker, it indicates that PC is not significant in traffic emissions. This study provided innovative insights of the organic aerosol content associated with air pollution dynamics in a megacity impacted by a unique vehicular fleet. It also shows the need of implementation of EURO VI technology and to improve mass transport systems such a metro and more bus corridors to allow better transport for 19 million people in the SPMA.
FEMALE MICE ARE RESISTANT TO Fabp1 GENE ABLATION-INDUCED ALTERATIONS IN BRAIN ENDOCANNABINOID LEVELS
Martin, Gregory G.; Chung, Sarah; Landrock, Danilo; Landrock, Kerstin K.; Dangott, Lawrence J.; Peng, Xiaoxue; Kaczocha, Martin; Murphy, Eric J.; Kier, Ann B.; Schroeder, Friedhelm
2017-01-01
Although liver fatty acid binding protein (FABP1, L-FABP) is not detectable in brain, Fabp1 gene ablation (LKO) markedly increases endocannabinoids (EC) in brains of male mice. Since the brain EC system of females differs significantly from that of males, it was important to determine if LKO differently impacted the brain EC system. LKO did not alter brain levels of arachidonic acid (ARA)-containing ECs, i.e arachidonoylethanolamide (AEA) and 2-arachidonoylglycerol (2-AG), but decreased non-ARA-containing N-acylethanolamides (OEA, PEA) and 2-oleoylglycerol (2-OG) that potentiate the actions of AEA and 2-AG. These changes in brain potentiating EC levels were not associated with: i) a net decrease in levels of brain membrane proteins associated with fatty acid uptake and EC synthesis; ii) a net increase in brain protein levels of cytosolic EC chaperones and enzymes in EC degradation; or iii) increased brain protein levels of EC receptors (CB1, TRVP1). Instead, the reduced or opposite responsiveness of female brain EC levels to loss of FABP1 (LKO) correlated with intrinsically lower FABP1 level in livers of WT females than males. These data show that female mouse brain endocannabinoid levels were unchanged (AEA, 2-AG) or decreased (OEA, PEA, 2-OG) by complete loss of FABP1 (LKO). PMID:27450559
Martin, Gregory G; Chung, Sarah; Landrock, Danilo; Landrock, Kerstin K; Dangott, Lawrence J; Peng, Xiaoxue; Kaczocha, Martin; Murphy, Eric J; Kier, Ann B; Schroeder, Friedhelm
2016-09-01
Although liver fatty acid binding protein (FABP1, L-FABP) is not detectable in the brain, Fabp1 gene ablation (LKO) markedly increases endocannabinoids (EC) in brains of male mice. Since the brain EC system of females differs significantly from that of males, it was important to determine if LKO differently impacted the brain EC system. LKO did not alter brain levels of arachidonic acid (ARA)-containing EC, i.e. arachidonoylethanolamide (AEA) and 2-arachidonoylglycerol (2-AG), but decreased non-ARA-containing N-acylethanolamides (OEA, PEA) and 2-oleoylglycerol (2-OG) that potentiate the actions of AEA and 2-AG. These changes in brain potentiating EC levels were not associated with: (1) a net decrease in levels of brain membrane proteins associated with fatty acid uptake and EC synthesis; (2) a net increase in brain protein levels of cytosolic EC chaperones and enzymes in EC degradation; or (3) increased brain protein levels of EC receptors (CB1, TRVP1). Instead, the reduced or opposite responsiveness of female brain EC levels to loss of FABP1 (LKO) correlated with intrinsically lower FABP1 level in livers of WT females than males. These data show that female mouse brain endocannabinoid levels were unchanged (AEA, 2-AG) or decreased (OEA, PEA, 2-OG) by complete loss of FABP1 (LKO).
Shen, Yuan; Wang, Xiaoyu; Xu, Jianping; Lu, Lin
2017-07-04
The SerpinE2 pathway is evolutionarily conserved and plays an important role in tumorigenesis. SerpinE2 (a small ubiquitin-related modifier), like ubiquitin, conjugates SerpinE2 proteins onto lysine residues of target proteins. SerpinE2 over-expression has been found in several tumors. Here, we detected the level of SerpinE2 in 72 samples of EC tissue using immunohistochemistry to assess the role of SerpinE2 in EC prognosis. Meanwhile, we knocked down SerpinE2 by siRNA in the HTB-111 and Ishikawa EC cell lines and analyzed the viability and mobility change using an MTT assay, an annexin V/PI apoptosis assay, a wound scratch test and a transwell assay. A Kaplan-Meier analysis indicated a negative correlation between the level of SerpinE2 and the EC prognosis. Silencing SerpinE2 induced cell apoptosis and reduced the migration ability. Our data suggest SerpinE2 works as an oncogene in EC.
Importance of ocean mesoscale variability for air-sea interactions in the Gulf of Mexico
NASA Astrophysics Data System (ADS)
Putrasahan, D. A.; Kamenkovich, I.; Le Hénaff, M.; Kirtman, B. P.
2017-06-01
Mesoscale variability of currents in the Gulf of Mexico (GoM) can affect oceanic heat advection and air-sea heat exchanges, which can influence climate extremes over North America. This study is aimed at understanding the influence of the oceanic mesoscale variability on the lower atmosphere and air-sea heat exchanges. The study contrasts global climate model (GCM) with 0.1° ocean resolution (high resolution; HR) with its low-resolution counterpart (1° ocean resolution with the same 0.5° atmosphere resolution; LR). The LR simulation is relevant to current generation of GCMs that are still unable to resolve the oceanic mesoscale. Similar to observations, HR exhibits positive correlation between sea surface temperature (SST) and surface turbulent heat flux anomalies, while LR has negative correlation. For HR, we decompose lateral advective heat fluxes in the upper ocean into mean (slowly varying) and mesoscale-eddy (fast fluctuations) components. We find that the eddy flux divergence/convergence dominates the lateral advection and correlates well with the SST anomalies and air-sea latent heat exchanges. This result suggests that oceanic mesoscale advection supports warm SST anomalies that in turn feed surface heat flux. We identify anticyclonic warm-core circulation patterns (associated Loop Current and rings) which have an average diameter of 350 km. These warm anomalies are sustained by eddy heat flux convergence at submonthly time scales and have an identifiable imprint on surface turbulent heat flux, atmospheric circulation, and convective precipitation in the northwest portion of an averaged anticyclone.
Ivanov, Vadim; Ivanova, Svetlana; Kalinovsky, Tatiana; Niedzwiecki, Aleksandra; Rath, Matthias
2008-07-01
Monocyte adhesion to endothelium plays an important role in atherosclerosis. We investigated the effects of micronutrients on monocyte-binding properties of extracellular matrix (ECM) produced by human aortic endothelial cells (AoEC). Confluent cultures of AoEC were exposed to ascorbic acid, quercetin, gotu kola extract (10% asiatic acid), green tea extract (40% epigallocatechin gallate), or a mixture of these micronutrients for 48 hours. AoEC-produced ECM was exposed by differential treatment. U937 monocyte adhesion was assayed by fluorescence. ECM composition was assayed immunochemically and with radiolabeled metabolic precursors. AoEC exposure to micronutrients reduced ECM capacity to bind monocytes in a dose-dependent manner. This effect was accompanied by profound changes in the ECM composition. Correlation analysis revealed that changes in monocyte adhesion to ECM had the strongest positive correlation with ECM content for laminin (CC = 0.9681, P < 0.01), followed by fibronectin, collagens type III, I, and IV, biglycan, heparan sulfate, and elastin. The strongest negative correlation was with chondroitin sulfate (CC = -0.9623, P < 0.01), followed by perlecan and versican. Individual micronutrients had diverse effects on ECM composition and binding properties, and their mixture was the most effective treatment. In conclusion, micronutrient-dependent reduction of monocyte adhesion to endothelium is partly mediated through specific modulation of ECM composition and properties.
KEPLER EXOPLANET CANDIDATE HOST STARS ARE PREFERENTIALLY METAL RICH
DOE Office of Scientific and Technical Information (OSTI.GOV)
Schlaufman, Kevin C.; Laughlin, Gregory, E-mail: kcs@ucolick.org, E-mail: laughlin@ucolick.org
We find that Kepler exoplanet candidate (EC) host stars are preferentially metal rich, including the low-mass stellar hosts of small-radius ECs. The last observation confirms a tentative hint that there is a correlation between the metallicity of low-mass stars and the presence of low-mass and small-radius exoplanets. In particular, we compare the J-H-g-r color-color distribution of Kepler EC host stars with a control sample of dwarf stars selected from the {approx}150, 000 stars observed during Q1 and Q2 of the Kepler mission but with no detected planets. We find that at J - H = 0.30 characteristic of solar-type stars,more » the average g-r color of stars that host giant ECs is 4{sigma} redder than the average color of the stars in the control sample. At the same J - H color, the average g-r color of solar-type stars that host small-radius ECs is indistinguishable from the average color of the stars in the control sample. In addition, we find that at J - H = 0.62 indicative of late K dwarfs, the average g-r color of stars that host small-radius ECs is 4{sigma} redder than the average color of the stars in the control sample. These offsets are unlikely to be caused by differential reddening, age differences between the two populations, or the presence of giant stars in the control sample. Stellar models suggest that the first color offset is due to a 0.2 dex enhancement in [Fe/H] of the giant EC host population at M{sub *} {approx} 1 M{sub sun}, while Sloan photometry of M 67 and NGC 6791 suggests that the second color offset is due to a similar [Fe/H] enhancement of the small-radius EC host population at M{sub *} {approx} 0.7 M{sub sun}. These correlations are a natural consequence of the core-accretion model of planet formation.« less
Occupational Exposure to Diesel Particulate Matter in Municipal Household Waste Workers.
Lee, Kyong-Hui; Jung, Hye-Jung; Park, Dong-Uk; Ryu, Seung-Hun; Kim, Boowook; Ha, Kwon-Chul; Kim, Seungwon; Yi, Gwangyong; Yoon, Chungsik
2015-01-01
The purposes of this study were to determine the following: 1) the exposure levels of municipal household waste (MHW) workers to diesel particulate matter (DPM) using elemental carbon (EC), organic carbon (OC), total carbon (TC), black carbon (BC), and fine particulate matter (PM 2.5) as indicators; 2) the correlations among the indicators; 3) the optimal indicator for DPM; and 4) factors that influence personal exposure to DPM. A total of 72 workers in five MHW collection companies were assessed over a period of 7 days from June to September 2014. Respirable EC/OC samples were quantified using the thermal optical transmittance method. BC and PM 2.5 were measured using real-time monitors, an aethalometer and a laser photometer. All results were statistically analyzed for occupational and environmental variables to identify the exposure determinants of DPM. The geometric mean of EC, OC, TC, BC and PM 2.5 concentrations were 4.8, 39.6, 44.8, 9.1 and 62.0 μg/m3, respectively. EC concentrations were significantly correlated with the concentrations of OC, TC and BC, but not with those of PM 2.5. The exposures of the MHW collectors to EC, OC, and TC were higher than those of the drivers (p<0.05). Workers of trucks meeting Euro 3 emission standard had higher exposures to EC, OC, TC and PM 2.5 than those working on Euro 4 trucks (p<0.05). Multiple regression analysis revealed that the job task, European engine emission standard, and average driving speed were the most influential factors in determining worker exposure. We assessed MHW workers' exposure to DPM using parallel sampling of five possible indicators. Of these five indicators, EC was shown to be the most useful indicator of DPM exposure for MHW workers, and the job task, European emission standard, and average driving speed were the main determinants of EC exposure.
2017-01-01
Purpose A vertical posture makes it difficult to maintain balance especially in the elderly. Loss of balance leads to falls and injuries. In the present study, we evaluated whether balance maintenance can be improved with the use of stochastic resonance whole body vibration (SR-WBV). Methods An examination of balance, involving 187 women aged 19–74 years, was conducted using double-plate posturography pre and post SR-WBV. The SR-WBV trainings were performed using the SRT Zeptor Medical-plus noise device. The entire study lasted 6 weeks, with a total of 12 training sessions, each consisting of nine 45 second series, with a 45 second pause between them. Results Post SR-WBV there was a reduction in the value of: the resultant mean velocity (MV) of the movement of COP (centre of pressure) for both lower limbs (B) and in the right lower limb (R) during the test with eyes closed (EC), the mean velocity and mean amplitude (MA) of the movement of COP along the x-axis (ML) of the left lower limb (L) during the test with eyes open (EO) and closed and some additional parameters. Negative correlations between age/index of improvement of MV-EC-B, MV-EC-L and MVML-EC-L, and BMI/index of improvement of MV-EC-B, MVML-EC-B appeared. Height correlated positively with the index of improvement of MV-EC-B and MVML-EC-B. Conclusions As a result of SR-WBV, the left leg is more stable along the x-axis and the disproportion between the stability of both legs is reduced. Consequently, body stability is higher. The SR-WBV is more effective in younger, taller and slimmer women. SR-WBV parameters should be optimized so that the training is more beneficial for elderly and shorter women, and for women with a higher BMI. PMID:28938021
Occupational Exposure to Diesel Particulate Matter in Municipal Household Waste Workers
Lee, Kyong-Hui; Jung, Hye-Jung; Park, Dong-Uk; Ryu, Seung-Hun; Kim, Boowook; Ha, Kwon-Chul; Kim, Seungwon; Yi, Gwangyong; Yoon, Chungsik
2015-01-01
Objective The purposes of this study were to determine the following: 1) the exposure levels of municipal household waste (MHW) workers to diesel particulate matter (DPM) using elemental carbon (EC), organic carbon (OC), total carbon (TC), black carbon (BC), and fine particulate matter (PM 2.5) as indicators; 2) the correlations among the indicators; 3) the optimal indicator for DPM; and 4) factors that influence personal exposure to DPM. Methods A total of 72 workers in five MHW collection companies were assessed over a period of 7 days from June to September 2014. Respirable EC/OC samples were quantified using the thermal optical transmittance method. BC and PM 2.5 were measured using real-time monitors, an aethalometer and a laser photometer. All results were statistically analyzed for occupational and environmental variables to identify the exposure determinants of DPM. Results The geometric mean of EC, OC, TC, BC and PM 2.5 concentrations were 4.8, 39.6, 44.8, 9.1 and 62.0 μg/m3, respectively. EC concentrations were significantly correlated with the concentrations of OC, TC and BC, but not with those of PM 2.5. The exposures of the MHW collectors to EC, OC, and TC were higher than those of the drivers (p<0.05). Workers of trucks meeting Euro 3 emission standard had higher exposures to EC, OC, TC and PM 2.5 than those working on Euro 4 trucks (p<0.05). Multiple regression analysis revealed that the job task, European engine emission standard, and average driving speed were the most influential factors in determining worker exposure. Conclusions We assessed MHW workers’ exposure to DPM using parallel sampling of five possible indicators. Of these five indicators, EC was shown to be the most useful indicator of DPM exposure for MHW workers, and the job task, European emission standard, and average driving speed were the main determinants of EC exposure. PMID:26248196
Qu, Xin; Hall, Alex; DeAngelis, Anthony M.; ...
2018-01-11
Differences among climate models in equilibrium climate sensitivity (ECS; the equilibrium surface temperature response to a doubling of atmospheric CO2) remain a significant barrier to the accurate assessment of societally important impacts of climate change. Relationships between ECS and observable metrics of the current climate in model ensembles, so-called emergent constraints, have been used to constrain ECS. Here a statistical method (including a backward selection process) is employed to achieve a better statistical understanding of the connections between four recently proposed emergent constraint metrics and individual feedbacks influencing ECS. The relationship between each metric and ECS is largely attributable tomore » a statistical connection with shortwave low cloud feedback, the leading cause of intermodel ECS spread. This result bolsters confidence in some of the metrics, which had assumed such a connection in the first place. Additional analysis is conducted with a few thousand artificial metrics that are randomly generated but are well correlated with ECS. The relationships between the contrived metrics and ECS can also be linked statistically to shortwave cloud feedback. Thus, any proposed or forthcoming ECS constraint based on the current generation of climate models should be viewed as a potential constraint on shortwave cloud feedback, and physical links with that feedback should be investigated to verify that the constraint is real. Additionally, any proposed ECS constraint should not be taken at face value since other factors influencing ECS besides shortwave cloud feedback could be systematically biased in the models.« less
DOE Office of Scientific and Technical Information (OSTI.GOV)
Qu, Xin; Hall, Alex; DeAngelis, Anthony M.
Differences among climate models in equilibrium climate sensitivity (ECS; the equilibrium surface temperature response to a doubling of atmospheric CO2) remain a significant barrier to the accurate assessment of societally important impacts of climate change. Relationships between ECS and observable metrics of the current climate in model ensembles, so-called emergent constraints, have been used to constrain ECS. Here a statistical method (including a backward selection process) is employed to achieve a better statistical understanding of the connections between four recently proposed emergent constraint metrics and individual feedbacks influencing ECS. The relationship between each metric and ECS is largely attributable tomore » a statistical connection with shortwave low cloud feedback, the leading cause of intermodel ECS spread. This result bolsters confidence in some of the metrics, which had assumed such a connection in the first place. Additional analysis is conducted with a few thousand artificial metrics that are randomly generated but are well correlated with ECS. The relationships between the contrived metrics and ECS can also be linked statistically to shortwave cloud feedback. Thus, any proposed or forthcoming ECS constraint based on the current generation of climate models should be viewed as a potential constraint on shortwave cloud feedback, and physical links with that feedback should be investigated to verify that the constraint is real. Additionally, any proposed ECS constraint should not be taken at face value since other factors influencing ECS besides shortwave cloud feedback could be systematically biased in the models.« less
Drought evolution, severity and trends in mainland China over 1961-2013.
Yao, Ning; Li, Yi; Lei, Tianjie; Peng, Lingling
2018-03-01
Droughts have destructive impacts on crop yields and water supplies, and researching droughts is vital for societal stability and human life. This work aimed to assess the spatiotemporal evolution of droughts in mainland China over 1961-2013 using four drought indices. These indices were the percentage of precipitation anomaly (Pa), standard precipitation index (SPI), standard precipitation evapotranspiration index (SPEI) and evaporative demand drought index (EDDI) at multiple timescales ranging from 1-week to 24-month. The variations of the SPI, SPEI and EDDI were compared with historical severe or extreme droughts. The general increases of the Pa, SPI and SPEI, and general decrease of the EDDI, consistently implied an overall relief of drought conditions over 1961-2013. The different drought indices revealed historical drought conditions, including the national extreme droughts in 1961, 1965, 1972, 1978, 1986, 1988, 1992, 1994, 1997, 1999 and 2000, but various drought severity levels were classified for each drought event since the classification standards differed. Although the SPI and SPEI performed better than the EDDI and there were higher correlations between the SPI and the SPEI, all the indices were regional- or station-specific and have identified historical severe or extreme drought events. At shorter timescales, the EDDI revealed earlier onsets and ends of flash droughts, unlike those indicated by the SPI and SPEI. The comparison of the different indices based on the historical drought events confirmed the uses of the Pa, SPI and SPEI for determining continuous droughts and that of the EDDI for identifying flash droughts. Copyright © 2017 Elsevier B.V. All rights reserved.
NASA Astrophysics Data System (ADS)
Sedigh Marvasti, S.; Gnanadesikan, A.; Bidokhti, A. A.; Dunne, J. P.; Ghader, S.
2015-07-01
We examine interannual variability of phytoplankton blooms in northwestern Arabian Sea and Gulf of Oman. Satellite data (SeaWIFS ocean color) shows two climatological blooms in this region, a wintertime bloom peaking in February and a summertime bloom peaking in September. A pronounced anti-correlation between the AVISO sea surface height anomaly (SSHA) and chlorophyll is found during the wintertime bloom. On a regional scale, interannual variability of the wintertime bloom is thus dominated by cyclonic eddies which vary in location from one year to another. These results were compared against the outputs from three different 3-D Earth System models. We show that two coarse (1°) models with the relatively complex biogeochemistry (TOPAZ) capture the annual cycle but neither eddies nor the interannual variability. An eddy-resolving model (GFDL CM2.6) with a simpler biogeochemistry (miniBLING) displays larger interannual variability, but overestimates the wintertime bloom and captures eddy-bloom coupling in the south but not in the north. The southern part of the domain is a region with a much sharper thermocline and nutricline relatively close to the surface, in which eddies modulate diffusive nutrient supply to the surface (a mechanism not previously emphasized in the literature). We suggest that for the model to simulate the observed wintertime blooms within cyclones, it will be necessary to represent this relatively unusual nutrient structure as well as the cyclonic eddies. This is a challenge in the Northern Arabian Sea as it requires capturing the details of the outflow from the Persian Gulf.
Altamirano-Diaz, Luis; Welisch, Eva; Dempsey, Adam A; Park, Teresa Sohee; Grattan, Michael; Norozi, Kambiz
2018-05-17
To evaluate the equivalence of the ICON ® electrical cardiometry (EC) haemodynamic monitor to measure cardiac output (CO) relative to transthoracic Doppler echocardiography (TTE) in paediatric patients with repaired coarctation of the aorta (CoA). A group of n = 28 CoA patients and n = 27 matched controls were enrolled. EC and TTE were performed synchronously on each participant and CO measurements compared using linear regression and Bland-Altman analysis. The CoA group was further subdivided into two groups, with n = 10 and without n = 18 increased left ventricular outflow tract velocity (iLVOTv) for comparison. CO measurements from EC and TTE in controls showed a strong correlation (R = 0.80, p < 0.001) and an acceptable percentage error (PE) of 28.1%. However, combining CoA and control groups revealed a moderate correlation (R = 0.57, p < 0.001) and a poor PE (44.2%). We suspected that the CO in a subset of CoA participants with iLVOTv was overestimated by TTE. Excluding the iLVOTv CoA participants improved the correlation (R = 0.77, p < 0.001) and resulted in an acceptable PE of 31.2%. CO measurements in paediatric CoA patients in the absence of iLVOTv are clinically equivalent between EC and TTE. The presence of iLVOTv may impact the accuracy of CO measurement by TTE, but not EC.
Electrical conductivity and total dissolved solids in urine.
Fazil Marickar, Y M
2010-08-01
The objective of this paper is to study the relevance of electrical conductivity (EC) and total dissolved solids (TDS) in early morning and random samples of urine of urinary stone patients; 2,000 urine samples were studied. The two parameters were correlated with the extent of various urinary concrements. The early morning urine (EMU) and random samples of the patients who attended the urinary stone clinic were analysed routinely. The pH, specific gravity, EC, TDS, redox potential, albumin, sugar and microscopic study of the urinary sediments including red blood cells (RBC), pus cells (PC), crystals, namely calcium oxalate monohydrate (COM), calcium oxalate dihydrate (COD), uric acid (UA), and phosphates and epithelial cells were assessed. The extent of RBC, PC, COM, COD, UA and phosphates was correlated with EC and TDS. The values of EC ranged from 1.1 to 33.9 mS, the mean value being 21.5 mS. TDS ranged from 3,028 to 18,480 ppm, the mean value being 7,012 ppm. The TDS levels corresponded with EC of urine. Both values were significantly higher (P < 0.05) in the EMU samples than the random samples. There was a statistically significant correlation between the level of abnormality in the urinary deposits (r = +0.27, P < 0.05). In samples, where the TDS were more than 12,000 ppm, there were more crystals than those samples containing TDS less than 12,000 ppm. However, there were certain urine samples, where the TDS were over 12,000, which did not contain any urinary crystals. It is concluded that the value of TDS has relevance in the process of stone formation.
Song, Xiaopeng; Zhou, Shuqin; Zhang, Yi; Liu, Yijun; Zhu, Huaiqiu; Gao, Jia-Hong
2015-01-01
The eyes-open (EO) and eyes-closed (EC) states have differential effects on BOLD-fMRI signal dynamics, affecting both the BOLD oscillation frequency of a single voxel and the regional homogeneity (ReHo) of several neighboring voxels. To explore how the two resting-states modulate the local synchrony through different frequency bands, we decomposed the time series of each voxel into several components that fell into distinct frequency bands. The ReHo in each of the bands was calculated and compared between the EO and EC conditions. The cross-voxel correlations between the mean frequency and the overall ReHo of each voxel's original BOLD series in different brain areas were also calculated and compared between the two states. Compared with the EC state, ReHo decreased with EO in a wide frequency band of 0.01-0.25 Hz in the bilateral thalamus, sensorimotor network, and superior temporal gyrus, while ReHo increased significantly in the band of 0-0.01 Hz in the primary visual cortex, and in a higher frequency band of 0.02-0.1 Hz in the higher order visual areas. The cross-voxel correlations between the frequency and overall ReHo were negative in all the brain areas but varied from region to region. These correlations were stronger with EO in the visual network and the default mode network. Our results suggested that different frequency bands of ReHo showed different sensitivity to the modulation of EO-EC states. The better spatial consistency between the frequency and overall ReHo maps indicated that the brain might adopt a stricter frequency-dependent configuration with EO than with EC.
NASA Astrophysics Data System (ADS)
Sarnat, Jeremy A.; Moise, Tamar; Shpund, Jacob; Liu, Yang; Pachon, Jorge E.; Qasrawi, Radwan; Abdeen, Ziad; Brenner, Shmuel; Nassar, Khaled; Saleh, Rami; Schauer, James J.
2010-07-01
This manuscript presents results from an extensive, multi-country comparative monitoring study of fine particulate matter (PM 2.5) and its primary chemical components in Israeli, Jordanian and Palestinian cities. This study represented the first time that researchers from these countries have worked together to examine spatial and temporal relationships for PM 2.5 and its major components among the study sites. The findings indicated that total PM 2.5 mass was relatively homogenous among many of the 11 sites as shown from strong between-site correlations. Mean annual concentrations ranged from 19.9 to 34.9 μg m -3 in Haifa and Amman, respectively, and exceeded accepted international air quality standards for annual PM 2.5 mass. Similarity of total mass was largely driven by SO 42- and crustal PM 2.5 components. Despite the close proximity of the seven, well correlated sites with respect to PM 2.5, there were pronounced differences among the cities for EC and, to a lesser degree, OC. EC, in particular, exhibited spatiotemporal trends that were indicative of strong local source contributions. Interestingly, there were moderate to strong EC correlations ( r > 0.65) among the large metropolitan cities, West Jerusalem, Tel Aviv and Amman. For these relatively large cities, (i.e., West Jerusalem, Tel Aviv and Amman), EC sources from the fleet of buses and cars typical for many urban areas predominate and likely drive spatiotemporal EC distributions. As new airshed management strategies and public health interventions are implemented throughout the Middle East, our findings support regulatory strategies that target integrated regional and local control strategies to reduce PM 2.5 mass and specific components suspected to drive adverse health effects of particulate matter exposure.
NASA Astrophysics Data System (ADS)
Grimmond, C. S. B.; Salmond, J. A.; Oke, T. R.; Offerle, B.; Lemonsu, A.
2004-12-01
Eddy covariance (EC) observations above the densely built-up center of Marseille during the Expérience sur site pour contraindre les modèles de pollution atmosphérique et de transport d'émissions (ESCOMPTE) summertime measurement campaign extend current understanding of surface atmosphere exchanges in cities. The instrument array presented opportunities to address issues of the representativeness of local-scale fluxes in urban settings. Separate EC systems operated at two levels, and a telescoping tower allowed the pair to be exposed at two different sets of heights. The flux and turbulence observations taken at the four heights, stratified by wind conditions (mistral wind and sea breeze), are used to address the partitioning of the surface energy balance in an area with large roughness elements. The turbulent sensible heat flux dominates in the daytime, although the storage heat flux is a significant term that peaks before solar noon. The turbulent latent heat flux is small but not negligible. Carbon dioxide fluxes show that this central city district is almost always a source, but the vegetation reduces the magnitude of the fluxes in the afternoon. The atmosphere in such a heavily developed area is rarely stable. The turbulence characteristics support the empirical functions proposed by M. Roth.
NASA Astrophysics Data System (ADS)
Safdernejad, Morteza S.; Karpenko, Oleksii; Ye, Chaofeng; Udpa, Lalita; Udpa, Satish
2016-02-01
The advent of Giant Magneto-Resistive (GMR) technology permits development of novel highly sensitive array probes for Eddy Current (EC) inspection of multi-layer riveted structures. Multi-frequency GMR measurements with different EC pene-tration depths show promise for detection of bottom layer notches at fastener sites. However, the distortion of the induced magnetic field due to flaws is dominated by the strong fastener signal, which makes defect detection and classification a challenging prob-lem. This issue is more pronounced for ferromagnetic fasteners that concentrate most of the magnetic flux. In the present work, a novel multi-frequency mixing algorithm is proposed to suppress rivet signal response and enhance defect detection capability of the GMR array probe. The algorithm is baseline-free and does not require any assumptions about the sample geometry being inspected. Fastener signal suppression is based upon the random sample consensus (RANSAC) method, which iteratively estimates parameters of a mathematical model from a set of observed data with outliers. Bottom layer defects at fastener site are simulated as EDM notches of different length. Performance of the proposed multi-frequency mixing approach is evaluated on finite element data and experimental GMR measurements obtained with unidirectional planar current excitation. Initial results are promising demonstrating the feasibility of the approach.
NASA Astrophysics Data System (ADS)
Grant, R. F.; Barr, A.; Black, T. A.; Margolis, H. A.; McCaughey, J. H.; Trofymow, J. A.
2010-05-01
Clearcutting strongly affects subsequent forest net ecosystem productivity (NEP). Hypotheses for ecological controls on NEP in the ecosystem model ecosys were tested with CO2 fluxes measured by eddy covariance (EC) in three post-clearcut conifer chronosequences. An algorithm for microbial colonization of fine and woody debris allowed the model to reproduce sigmoidal declines in debris observed after clearcutting. In the model, Rh drove debris decomposition that drove microbial growth, N mineralization and asymbiotic N2 fixation. These processes controlled root N uptake, and thereby CO2 fixation in regrowing vegetation. Interactions among soil and plant processes allowed the model to simulate hourly CO2 fluxes and annual NEP within the uncertainty of EC measurements from 2003 through 2007 over forest stands from 1 to 80 years of age in all three chronosequences without site- or species-specific parameterization. The model was then used to study the impacts of increasing harvest removals on subsequent C stocks at one of the chronosequence sites. Model results indicated that increasing harvest removals would hasten recovery of NEP during the first 30 years after clearcutting, but would reduce ecosystem C stocks by about 15% of the increased removals at the end of an 80 year harvest cycle.
Roy, Subhojit; Galasko, Douglas R.; Hansen, Lawrence A.; Masliah, Eliezer
2017-01-01
Despite considerable research to uncover them, the anatomic and neuropathologic correlates of memory impairment in dementia with Lewy bodies (DLB) remain unclear. While some studies have implicated Lewy bodies in the neocortex, others have pointed to α-synuclein pathology in the hippocampus. We systematically examined hippocampal Lewy pathology and its distribution in hippocampal subfields in 95 clinically and neuropathologically characterized human cases of DLB, finding that α-synuclein pathology was highest in two hippocampal-related subregions: the CA2 subfield and the entorhinal cortex (EC). While the EC had numerous classic somatic Lewy bodies, CA2 contained mainly Lewy neurites in presumed axon terminals, suggesting the involvement of the EC → CA2 circuitry in the pathogenesis of DLB symptoms. Clinicopathological correlations with measures of verbal and visual memory supported a role for EC Lewy pathology, but not CA2, in causing these memory deficits. Lewy pathology in CA1—the main output region for CA2—correlated best with results from memory testing despite a milder pathology. This result indicates that CA1 may be more functionally relevant than CA2 in the context of memory impairment in DLB. These correlations remained significant after controlling for several factors, including concurrent Alzheimer's pathology (neuritic plaques and neurofibrillary tangles) and the interval between time of testing and time of death. Our data suggest that although hippocampal Lewy pathology in DLB is predominant in CA2 and EC, memory performance correlates most strongly with CA1 burden. SIGNIFICANCE STATEMENT This study provides a detailed neuropathologic analysis of hippocampal Lewy pathology in human patients with autopsy-confirmed dementia with Lewy bodies. The approach—informed by regional molecular markers, concurrent Alzheimer's pathology analysis, and relevant clinical data—helps tease out the relative contribution of Lewy pathology to memory dysfunction in the disease. Levels of Lewy pathology were found to be highest in the hippocampal CA2 subregion and entorhinal cortex, implicating a potentially overlooked circuit in disease pathogenesis. However, correlation with memory performance was strongest with CA1. This unexpected finding suggests that Lewy pathology must reach a critical burden across hippocampal circuitry to contribute to memory dysfunction beyond that related to other factors, notably coexisting Alzheimer's disease tau pathology. PMID:28039370
Eddy covariance measurements of sea spray particles over the Atlantic Ocean
NASA Astrophysics Data System (ADS)
Norris, S.; Brooks, I.; de Leeuw, G.; Smith, M. H.; Moeman, M.; Lingard, J.
2007-09-01
Most estimates of sea spray aerosol source functions have used indirect means to infer the rate of production as a function of wind speed. Only recently has the technology become available to make high frequency measurements of aerosol concentration suitable for direct eddy correlation determination of the particle flux. This was accomplished in this study by combining a newly developed fast aerosol particle counter with an ultrasonic anemometer which allowed for eddy covariance measurements of size-segregated particle fluxes. The aerosol instrument is the Compact Lightweight Aerosol Spectrometer Probe (CLASP) - capable of measuring 8-channel size spectra for mean radii between 0.15 and 0.35 μm at 10 Hz. The first successful measurements were made during the WASFAB (Waves, Air Sea Fluxes, Aerosol and Bubbles) field campaign in October 2005 in Duck (NC, USA). The method and results are presented and comparisons are made with recent sea spray source functions from the literature.
Sharma, Priyanka; Saraya, Anoop; Sharma, Rinu
2018-01-30
To evaluate the diagnostic potential of a six microRNAs (miRNAs) panel consisting of miR-21, miR-144, miR-107, miR-342, miR-93 and miR-152 for esophageal cancer (EC) detection. The expression of miRNAs was analyzed in EC sera samples using quantitative real-time PCR. Risk score analysis was performed and linear regression models were then fitted to generate the six-miRNA panel. In addition, we made an effort to identify significantly dysregulated miRNAs and mRNAs in EC using the Cancer Genome Atlas (TCGA) miRNAseq and RNAseq datasets, respectively. Further, we identified significantly correlated miRNA-mRNA target pairs by integrating TCGA EC miRNAseq dataset with RNAseq dataset. The panel of circulating miRNAs showed enhanced sensitivity (87.5%) and specificity (90.48%) in terms of discriminating EC patients from normal subjects (area under the curve [AUC] = 0.968). Pathway enrichment analysis for potential targets of six miRNAs revealed 48 significant (P < 0.05) pathways, viz. pathways in cancer, mRNA surveillance, MAPK, Wnt, mTOR signaling, and so on. The expression data for mRNAs and miRNAs, downloaded from TCGA database, lead to identification of 2309 differentially expressed genes and 189 miRNAs. Gene ontology and pathway enrichment analysis showed that cell-cycle processes were most significantly enriched for differentially expressed mRNA. Integrated analysis of TCGA miRNAseq and RNAseq datasets resulted in identification of 53 063 significantly and negatively correlated miRNA-mRNA pairs. In summary, a novel and highly sensitive signature of serum miRNAs was identified for EC detection. Moreover, this is the first report identifying miRNA-mRNA target pairs from EC TCGA dataset, thus providing a comprehensive resource for understanding the interactions existing between miRNA and their target mRNAs in EC. © 2018 John Wiley & Sons Australia, Ltd.
Eisenberg, Nancy; Taylor, Zoe E; Widaman, Keith F; Spinrad, Tracy L
2015-11-01
At approximately 30, 42, and 54 months of age (N = 231), the relations among children's externalizing symptoms, intrusive maternal parenting, and children's effortful control (EC) were examined. Both intrusive parenting and low EC have been related to psychopathology, but children's externalizing problems and low EC might affect the quality of parenting and one another. Mothers' intrusive behavior with their children was assessed with observations, children's EC was measured with mothers' and caregivers' reports, and children's externalizing symptoms were assessed with mothers', fathers', and caregivers' reports. In a structural equation panel model, bidirectional relations between intrusive parenting and EC were found: EC at 30 and 42 months predicted low levels of intrusive parenting a year later, controlling for prior levels of parenting and vice versa. Moreover, high levels of children's externalizing problems at both 30 and 42 months negatively predicted EC a year later, controlling for prior levels of EC. Although externalizing problems positively predicted high EC over time, this appeared to be a suppression effect because these variables had a strong negative pattern in the zero-order correlations. Moreover, when controlling for the stability of intrusive parenting, EC, and externalizing (all exhibited significant stability across time) and the aforementioned cross-lagged predictive paths, EC and externalizing problems were still negatively related within the 54-month assessment. The findings are consistent with the view that children's externalizing behavior undermines their EC and contributes to intrusive mothering and that relations between intrusive parenting and EC are bidirectional across time. Thus, interventions that focus on modifying children's externalizing problems (as well as the quality of parenting) might affect the quality of parenting they receive and, hence, subsequent problems with adjustment.
Extracellular space preservation aids the connectomic analysis of neural circuits.
Pallotto, Marta; Watkins, Paul V; Fubara, Boma; Singer, Joshua H; Briggman, Kevin L
2015-12-09
Dense connectomic mapping of neuronal circuits is limited by the time and effort required to analyze 3D electron microscopy (EM) datasets. Algorithms designed to automate image segmentation suffer from substantial error rates and require significant manual error correction. Any improvement in segmentation error rates would therefore directly reduce the time required to analyze 3D EM data. We explored preserving extracellular space (ECS) during chemical tissue fixation to improve the ability to segment neurites and to identify synaptic contacts. ECS preserved tissue is easier to segment using machine learning algorithms, leading to significantly reduced error rates. In addition, we observed that electrical synapses are readily identified in ECS preserved tissue. Finally, we determined that antibodies penetrate deep into ECS preserved tissue with only minimal permeabilization, thereby enabling correlated light microscopy (LM) and EM studies. We conclude that preservation of ECS benefits multiple aspects of the connectomic analysis of neural circuits.
Shi, Yuping; Huang, Limin; Soh, Ai Kah; Weng, George J; Liu, Shuangyi; Redfern, Simon A T
2017-09-11
Electrocaloric (EC) materials show promise in eco-friendly solid-state refrigeration and integrable on-chip thermal management. While direct measurement of EC thin-films still remains challenging, a generic theoretical framework for quantifying the cooling properties of rich EC materials including normal-, relaxor-, organic- and anti-ferroelectrics is imperative for exploiting new flexible and room-temperature cooling alternatives. Here, we present a versatile theory that combines Master equation with Maxwell relations and analytically relates the macroscopic cooling responses in EC materials with the intrinsic diffuseness of phase transitions and correlation characteristics. Under increased electric fields, both EC entropy and adiabatic temperature changes increase quadratically initially, followed by further linear growth and eventual gradual saturation. The upper bound of entropy change (∆S max ) is limited by distinct correlation volumes (V cr ) and transition diffuseness. The linearity between V cr and the transition diffuseness is emphasized, while ∆S max = 300 kJ/(K.m 3 ) is obtained for Pb 0.8 Ba 0.2 ZrO 3 . The ∆S max in antiferroelectric Pb 0.95 Zr 0.05 TiO 3 , Pb 0.8 Ba 0.2 ZrO 3 and polymeric ferroelectrics scales proportionally with V cr -2.2 , owing to the one-dimensional structural constraint on lattice-scale depolarization dynamics; whereas ∆S max in relaxor and normal ferroelectrics scales as ∆S max ~ V cr -0.37 , which tallies with a dipolar interaction exponent of 2/3 in EC materials and the well-proven fractional dimensionality of 2.5 for ferroelectric domain walls.
Schrieks, Ilse C.; Ripken, Dina; Stafleu, Annette; Witkamp, Renger F.; Hendriks, Henk F. J.
2015-01-01
Background The endocannabinoid system is suggested to play a regulatory role in mood. However, the response of circulating endocannabinoids (ECs) to mood changes has never been tested in humans. In the present study, we examined the effects of mood changes induced by ambiance and moderate alcohol consumption on plasma ECs 2-arachidonoylglycerol (2-AG), anandamide (AEA), and some N-acylethanolamine (NAE) congeners in humans. Methods Healthy women (n = 28) participated in a randomized cross-over study. They consumed sparkling white wine (340 mL; 30 g alcohol) or alcohol-free sparkling white wine (340 mL; <2 g alcohol) as part of a standard evening meal in a room with either a pleasant or an unpleasant ambiance. Results Plasma concentrations of palmitoylethanolamide (PEA) and stearoylethanolamide (SEA) increased after 30 min in the unpleasant ambiance, while they decreased in the pleasant ambiance. Changes in ECs and their NAE congeners correlated with mood states, such as happiness and fatigue, but in the pleasant ambiance without alcohol only. ECs and their NAE congeners were correlated with serum free fatty acids and cortisol. Conclusion This is the first human study to demonstrate that plasma NAEs are responsive to an unpleasant meal ambiance. Furthermore, associations between mood states and ECs and their NAE congeners were observed. Trial Registration Clinicaltrials.gov NCT01426022 PMID:25962070
Ornaghi, Veronica; Pepe, Alessandro; Grazzani, Ilaria
2016-01-01
Emotion comprehension (EC) is known to be a key correlate and predictor of prosociality from early childhood. In the present study, we examined this relationship within the broad theoretical construct of social understanding which includes a number of socio-emotional skills, as well as cognitive and linguistic abilities. Theory of mind, especially false-belief understanding, has been found to be positively correlated with both EC and prosocial orientation. Similarly, language ability is known to play a key role in children's socio-emotional development. The combined contribution of false-belief understanding and language to explaining the relationship between EC and prosociality has yet to be investigated. Thus, in the current study, we conducted an in-depth exploration of how preschoolers' false-belief understanding and language ability each contribute to modeling the relationship between children's comprehension of emotion and their disposition to act prosocially toward others, after controlling for age and gender. Participants were 101 4- to 6-year-old children (54% boys), who were administered measures of language ability, false-belief understanding, EC and prosocial orientation. Multiple mediation analysis of the data suggested that false-belief understanding and language ability jointly and fully mediated the effect of preschoolers' EC on their prosocial orientation. Analysis of covariates revealed that gender exerted no statistically significant effect, while age had a trivial positive effect. Theoretical and practical implications of the findings are discussed.
Devis, Laura; Martinez-Garcia, Elena; Moiola, Cristian P.; Quiles, Maria Teresa; Arbos, Maria Antonia; Stirbat, Tomita Vasilica; Brochard-Wyart, Françoise; García, Ángel; Alonso-Alconada, Lorena; Abal, Miguel; Diaz-Feijoo, Berta; Thomas, William; Dufour, Sylvie; Mancebo, Gemma; Alameda, Francesc
2018-01-01
Endometrial cancer (EC) is the sixth deadliest cancer in women. The depth of myometrial invasion is one of the most important prognostic factors, being directly associated with tumor recurrence and mortality. In this study, ALCAM, a previously described marker of EC recurrence, was studied by immunohistochemistry at the superficial and the invasive tumor areas from 116 EC patients with different degree of myometrial invasion and related to a set of relevant epithelial and mesenchymal markers. ALCAM expression presented a heterogeneous functionality depending on its localization, it correlated with epithelial markers (E-cadherin/β-catenin) at the superficial area, and with mesenchymal markers at the invasive front (COX-2, SNAIL, ETV5, and MMP-9). At the invasive front, ALCAM-negativity was an independent marker of myometrial invasion. This negativity, together with an increase of soluble ALCAM in uterine aspirates from patients with an invasive EC, and its positive correlation with MMP-9 levels, suggested that ALCAM shedding by MMP-9 occurs at the invasive front. In vivo and in vitro models of invasive EC were generated by ETV5-overexpression. In those, we demonstrated that ALCAM shedding was related to a more invasive pattern and that full-ALCAM recovery reverted most of the ETV5-cells mesenchymal abilities, partially through a p-ERK dependent-manner. PMID:29682175
NASA Astrophysics Data System (ADS)
Ciani, Daniele; Carton, Xavier; Barbosa Aguiar, Ana Claudia; Peliz, Alvaro; Bashmachnikov, Igor; Ienna, Federico; Chapron, Bertrand
2017-04-01
Subsurface-intensified eddies are ubiquitous in the world ocean. They can be generated by exchanges of water masses between semi-enclosed evaporation basins and the open ocean or by deep convection. Past and recent studies have shown that these eddies are carriers of large amounts of heat and salt, that they are coherent over inter-annual timescales and that they can migrate for several thousands of miles from their origination areas towards the open ocean. Hence, subsurface-intensified eddies can influence the three-dimensional distribution of oceanic tracers at global scale. The synoptic knowledge of the eddies positions and mean pathways is then crucial for evaluating temperature and salinity budgets in the world ocean. At present day, satellite sensors constitute the ideal tool for the synoptic and global scale observations of the ocean. Since they only provide informations on the oceanic surface, we characterized the signatures that subsurface eddies generate at the sea-surface, to determine the extent to which they can be isolated from the surrounding surface turbulence and be considered as a trace of an underlying eddy. We studied the surface signature of subsurface-intensified anticyclones (Mediterranean Water Eddies - Meddies) in a realistic, long-term (20 years) and high resolution simulation (dx = 3 km) based on the ROMS model. The novelty and advantage of this approach is given by the simultaneous availability of the full 3D eddies characteristics, the ones of the background ocean and of the sea-surface (in terms of sea-surface height, temperature and salinity). This also allowed us to speculate on a synergy between different satellite observations for the automatic detection of subsurface eddies from space. The along trajectory properties and surface signatures of more than 90 long-lived Meddies were analyzed. We showed that the Meddies constantly generate positive anomalies in sea-surface height and that these anomalies are principally related to the Meddy potential vorticity structure at depth (around 1000 m below the sea-surface). Such anomalies were long-lived, mostly migrated exhibiting southwestward trajectories, their intensities were O(10 cm) and extended horizontally up to more than 300 km (around 1.5 times the Meddy diameter). On the other hand, the Meddies thermohaline surface signatures proved to be mostly dominated by the local surface conditions and their structure poorly correlated to the Meddy structure at depth (e.g. the Meddy volume-integrated salt and temperature content). These results point out that satellite altimetry is the most suitable approach to track subsurface-intensified eddies from observations of the sea-surface, also encouraging the use of future high-resolution altimetric observations (e.g. SWOT) to detect subsurface oceanic motions from satellite sensors.
Fluxes of total reactive atmospheric nitrogen using eddy covariance above arable land
NASA Astrophysics Data System (ADS)
Brummer, C.; Marx, O.; Kutsch, W. L.; Ammann, C.; Wolff, V.; Freibauer, A.
2011-12-01
A novel measurement technique (TRANC: Total Reactive Atmospheric Nitrogen Converter) was used to determine the biosphere-atmosphere exchange of the sum of all airborne reactive nitrogen (Nr) compounds. While concentration and flux measurements of Nr species from agriculture are still challenging from a metrological point of view and well-established measurement techniques (e.g., chemiluminescence detector (CLD), molybdenum converter, denuder/impinger with ion chromatography analysis) are usually limited to single compounds or provide concentration values and flux rates in poor time resolution and require labour and cost-intensive lab analyses, we present results from a campaign where the TRANC in combination with a fast-response analyzer (CLD) was used in an eddy-covariance (EC) setup to quantify total Nr. The basic measurement concept of the TRANC is the full conversion of all Nr compounds in the sample air to nitrogen monoxide (NO) within two reaction steps. Initially, reduced N compounds are being oxidized, whereas oxidized N compounds are thermally converted to compounds of lower oxidation states. Particulate N is being sublimated and oxidized or reduced afterwards. In a second reaction step, remaining higher N oxides in the sample air or those originated in the first reaction step are catalytically converted to NO. Carbon monoxide is used as reduction gas. The 10-months field campaign was conducted at an agricultural site planted with winter wheat in Thuringia, Germany. Total Nr concentrations were usually in the range of 5 to 30 ppb showing distinctive diurnal patterns with relatively low values from midday to late afternoon and highest values at night. Amplitudes were observed to be higher during the period of growth when no fertilizer was added. After fertilization events, total Nr concentrations were as high as 200 ppb for a short period of time. Different diurnal flux patterns depending on season and time passed since the last fertilization could be identified. In periods following fertilization, mean diurnal fluxes with peak emission rates of 5 ng m-2 s-1 in the afternoon were observed. On average up to 2 ng m-2 s-1 were taken up in the early morning hours during the vegetation period before the first fertilizer was applied. A strong linear correlation (R2=0.78) was found between the total Nr flux and stomatal conductance multiplied by total Nr concentration. The cumulative curve of the total Nr fluxes after 10 months of measurements showed that the three fertilization events almost compensated the usually observed slight total Nr deposition. The net total Nr uptake at the end of our campaign was ~2 kg N ha-1. The results of our campaign show that the usage of the TRANC within an EC setup was successfully established and allows for the permanent determination of the net total Nr exchange between ecosystem and atmosphere.
NASA Astrophysics Data System (ADS)
Pan, D.; Benedict, K. B.; Ham, J. M.; Prenni, A. J.; Schichtel, B. A.; Collett, J. L., Jr.; Zondlo, M. A.
2015-12-01
NH3 is an important component of the bio-atmospheric N cycle with implications for regional air quality, human and ecosystem health degradation, and global climate change. However, measuring NH3 flux is challenging, requiring a sensor with high sensitivity (sub-ppbv), fast response time and the capability to account for NH3 adsorption effects. In this study, we address these issues with an open-path quantum-cascade-based sensor for eddy covariance (EC) measurements. Previously, our EC NH3 sensor was deployed over a feedlot in Colorado in 2013 and 2014, and the results showed the potential of the sensor to measure NH3 emissions from agricultural sources. In the summer of 2015, the sensor was installed at a remote monitoring site in Rocky Mountain National Park to measure NH3 flux over a natural grass land. During the deployment, the precision of the sensor was about 0.15 ppbv at 10 Hz, and the detection limit of the flux was estimated to be 0.7±0.5 ng NH3/s/m2. The cospectra of the NH3 flux closely resembled those of CO2 flux and sensible heat flux measured by a LI-7500 CO2 analyzer and a CSAT3 sonic anemometer. The ogive analyses indicated that the loss of NH3 fluxes due to various damping effects was about 15%. Examining initial results from a few days of measurement, the measured NH3 fluxes appear to have a strong diurnal pattern with local emissions during afternoon, a pattern not previously reported for remote grass land. The pattern is consistent with background NH3 concentration measured by PICARRO NH3 analyzer, although summertime afternoon concentration increases at the site have previously been associated with upslope transport from urban and agricultural regions to the east. The results demonstrate the sensor's capability to measure NH3 flux in low NH3 conditions and also show that more measurements are needed to investigate spatial and temporal variability of NH3 flux.
Consequences to precipitation regimes of replacing native Brazilian Cerrado by managed Eucalyptus
NASA Astrophysics Data System (ADS)
Siqueira, M. B.; Mota, F. C. M.
2016-12-01
Before the large people influx and development of the central part of Brazil in the sixties, due to new capital Brasília, Cerrado, a typical Brazilian savanna-type vegetation, used to occupy about 2 million km2, going from the Amazon tropical forest, in the north, to the edges of what used to be the Atlantic forest in the southeast. Today, somewhat 50% of this area has given place to agriculture, pasture and managed forests. Understanding how Cerrado interacts with the atmosphere and how this interaction will be modified with this land-use change is a crucial step towards improving predictions of future climate-change scenarios. Cerrado is a vegetation adapted to a climate characterized by two distinct seasons, a wet season (Nov-Mar) and dry season (May-Ago), with April and October being transitions between seasons. Typically, 75% of precipitation happens in the wet-season months and only 5% during dry-season. In this study, it is investigated the potential impacts of the substitution of Cerrado to the eco-hydrological characteristics of the region. The focus here is Eucalyptus plantation, which has increased substantially in the last decade due to government incentives. Two eddy-covariance (EC) systems were installed, one in an undisturbed Cerrado Stricto area and other in a recently-established Eucalyptus plantation. The two areas are 1,400m apart and are subjected to the same meteorology and similar edaphic conditions. Besides instrumentation typical of EC towers, a soil-moisture profiling system was installed in each site. Surface flux data from the eddy-covariance towers, along with daily upper air sounding profiles collected at the Brasília International Airport (located 10Km from the towers), were used to drive a simplified Atmospheric Boundary Layer (ABL) slab model in order to investigate possible consequences of a large-scale shift from Cerrado to Eucalyptus to precipitation regimes in the region. Preliminary results show that replacing Cerrado for Eucalyptus causes reduction in ABL temperature, increase in ABL water-vapor mixing ratio and slightly reduces ABL height. Consequences of those changes on the hydrology could be most important in the season transition stages.
Eddy Covariance measurements of stable CO2 and H2O isotopologues
NASA Astrophysics Data System (ADS)
Braden-Behrens, Jelka; Knohl, Alexander
2015-04-01
The analysis of the stable isotope composition of CO2 and H2O fluxes (such as 13C, 18O and 2H in H2O and CO2) has provided valuable insights into ecosystem gas exchange. The approach builds on differences in the isotope signature of different ecosystem components that are primarily caused by the preference for or the discrimination against respective isotope species by important processes within the ecosystem (e.g. photosynthesis or leaf water diffusion). With the ongoing development of laser spectrometric methods, fast and precise measurements of isotopologue mixing ratios became possible, hence also enabling Eddy Covariance (EC) based approaches to directly measure the isotopic composition of CO2 and H2Ov net fluxes on ecosystem scale. During an eight month long measurement campaign in 2015, we plan to simultaneously measure CO2 and H2Ov isotopologue fluxes using an EC approach in a managed beech forest in Thuringia, Germany. For this purpose, we will use two different laser spectrometers for high frequency measurements of isotopic compositions: For H2Ov measurements, we will use an off axis cavity output water vapour isotope analyser (WVIA, Los Gatos Research Inc.) with 5 Hz response; and for CO2 measurements, we will use a quantum cascade laser-based system (QCLAS, Aerodyne Research Inc.) with thermoelectrically cooled detectors and up to 10 Hz measurement capability. The resulting continuous isotopologue flux measurements will be accompanied by intensive sampling campaigns on the leaf scale: Water from leaf, twig, soil and precipitation samples will be analysed in the lab using isotope ratio mass spectrometry. During data analysis we will put a focus on (i) the influence of carbon and oxygen discrimination on the isotopic signature of respective net ecosystem exchange, (ii) on the relationship between evapotranspiration and leaf water enrichment, and (iii) on the 18O exchange between carbon dioxide and water. At present, we already carried out extensive instrument performance tests for both laser spectrometers that will be presented here. In addition, we will present the instrumentation, the measurement periphery as well as anticipated analysis approaches required for the planned measurement campaign.
Schulze, M; Rüdiger, K; Jung, M; Grossfeld, R
2015-01-01
A study was performed to see if refractometry can be used as a new quality control tool for boar semen extenders. For this the refractive index and osmolality of BTS extender concentrations (EC) were recorded in 10%-steps from 50% to 150% and 200% of the correct amount. Twelve boar ejaculates were evaluated for semen quality. The refractive index for the correctly prepared extender was 4.6±0.0°Bx, corresponded to 316±16mOsmkg(-1), and correlated highly with osmolality (r=0.99; P<0.001). Total sperm motility with 100% EC differed significantly from ≤70% EC (P<0.001) and 200% EC (P<0.001) on day 1 (d1) and d4, respectively. The percentage of motile spermatozoa in a thermoresistance test on d2 showed a significant drop using ≤70% EC (P=0.047) and ≥140% EC (P=0.004). Secondary apical ridge defects were significantly higher using 50% EC (P<0.001) and ≥150% EC (P=0.032) compared to 100% EC, respectively. An increased number of coiled tails were observed using ≤60% EC (P<0.001). Percentages of spermatozoa with intact membranes on d2 resulted in a significant decrease using 50% EC (P<0.001) and ≥150% EC (P=0.005), respectively. The mean percentage of PI negative spermatozoa with active mitochondria on d2 showed a significant difference using ≤60% EC (P=0.016) and ≥140% EC (P<0.001) compared to 100% EC, respectively. Boar sperm quality is affected by inexact extender preparation. The refractive-index is an indicator of osmolality and may be used to verify semen extender preparation. The sensitivity is sufficient to detect deviations from correct extender preparation before negative effects on sperm quality occur. Copyright © 2014 Elsevier B.V. All rights reserved.
Kevrekidis, Pantelis; Skapinakis, Petros; Damigos, Dimitris; Mavreas, Venetsanos
2008-08-21
The Emotional Contagion Scale (ECS) is a self-report scale used to measure individual differences in susceptibility to converge towards the emotions expressed by others. The main aim of the present paper was to examine the psychometric properties of the Greek translation of the scale. The Greek ECS was completed by 691 undergraduate students (312 males and 379 females). To investigate the factor structure of the ECS, principal components analysis (PCA) was used. The results showed that a four-factor model was tenable. Regarding homogeneity, the Greek ECS version showed acceptable results for the full scale (alpha = 0.74) but not for all subscales. Gender differences were also identified concerning the susceptibility to emotional contagion between men and women. Women score significantly higher than men for all the different emotions described by the ECS (love, happiness, sadness) except the anger emotion, where there was no significant difference. The Greek version of the ECS showed good psychometric properties. It can be used to assess susceptibility to emotional contagion in correlation with psychopathological processes, mood and anxiety disorders primarily. The usefulness of the ECS in the fields of group psychotherapy and health psychology is also under consideration. Further investigation is needed in all these areas.
Fox, Benjamin D; Okumiya, Toshika; Attas-Fox, Liat; Kassirer, Michael; Raviv, Yael; Kramer, Mordechai R
2012-04-01
Pulmonary arterial hypertension (PAH) has been associated with hemolytic conditions such as sickle cell disease but the possible role of hemolysis in the pathogenesis or pathophysiology of other forms of PAH has not been studied. Erythrocyte lifespan is the gold-standard test of hemolysis and may be measured by assaying erythrocyte creatine (EC) levels. EC decreases as the erythrocyte ages, so patients with hemolysis have high EC levels. We measured EC and other parameters of hemolysis in patients with idiopathic and connective tissue associated PAH and normal controls. In patients with PAH (n = 40), EC levels were higher than in controls n = 30 (patients EC 1.72 mcmol/g HgB 95%CI[1.51, 1.96], controls EC 1.05 mcmol/g HgB [0.93, 1.19], p < 0.0001). High levels of EC correlated with worse 6 min walk (r = -0.42, p < 0.0001) and worse functional class (p = 0.002). Other indirect indices of hemolysis (total lactate dehydrogenase, red cell distribution width) were also increased in patients with PAH relative to controls. There is evidence of subclinical hemolysis in patients with PAH, and higher levels of hemolysis are associated with poorer exercise capacity. Copyright © 2012 Elsevier Ltd. All rights reserved.
Sievert, Wolfgang; Tapio, Soile; Breuninger, Stephanie; Gaipl, Udo; Andratschke, Nicolaus; Trott, Klaus-Rüdiger; Multhoff, Gabriele
2014-01-01
Background Comparative analysis of the cellular biology of the microvasculature in different tissues requires the availability of viable primary endothelial cells (ECs). This study describes a novel method to isolate primary ECs from healthy organs, repair blastemas and tumors as examples of non-proliferating and proliferating benign and malignant tissues and their functional characterization. Methodology/Principal Findings Single cell suspensions from hearts, lungs, repair blastemas and tumors were incubated consecutively with an anti-CD31 antibody and magnetic micro-beads, coupled to a derivative of biotin and streptavidin, respectively. Following magnetic bead separation, CD31-positive ECs were released by biotin-streptavidin competition. In the absence of micro-beads, ECs became adherent to plastic surfaces. ECs from proliferating repair blastemas and tumors were larger and exhibited higher expression densities of CD31, CD105 and CD102 compared to those from non-proliferating normal tissues such as heart and lung. The expression density of CD34 was particularly high in tumor-derived ECs, and that of CD54 and CD144 in ECs of repair blastemas. Functionally, ECs of non-proliferating and proliferating tissues differed in their capacity to form tubes in matrigel and to align under flow conditions. Conclusions/Significance This method provides a powerful tool to generate high yields of viable, primary ECs of different origins. The results suggest that an altered expression of adhesion molecules on ECs in proliferating tissues contribute to loss of EC function that might cause a chaotic tumor vasculature. PMID:24632811
Dehesh, Tania; Zare, Najaf; Ayatollahi, Seyyed Mohammad Taghi
2015-01-01
Univariate meta-analysis (UM) procedure, as a technique that provides a single overall result, has become increasingly popular. Neglecting the existence of other concomitant covariates in the models leads to loss of treatment efficiency. Our aim was proposing four new approximation approaches for the covariance matrix of the coefficients, which is not readily available for the multivariate generalized least square (MGLS) method as a multivariate meta-analysis approach. We evaluated the efficiency of four new approaches including zero correlation (ZC), common correlation (CC), estimated correlation (EC), and multivariate multilevel correlation (MMC) on the estimation bias, mean square error (MSE), and 95% probability coverage of the confidence interval (CI) in the synthesis of Cox proportional hazard models coefficients in a simulation study. Comparing the results of the simulation study on the MSE, bias, and CI of the estimated coefficients indicated that MMC approach was the most accurate procedure compared to EC, CC, and ZC procedures. The precision ranking of the four approaches according to all above settings was MMC ≥ EC ≥ CC ≥ ZC. This study highlights advantages of MGLS meta-analysis on UM approach. The results suggested the use of MMC procedure to overcome the lack of information for having a complete covariance matrix of the coefficients.
Chai, Tsun-Thai; Kwek, Meng-Tee; Ong, Hean-Chooi; Wong, Fai-Chu
2015-11-01
This study aimed to isolate a potent antiglucosidase and antioxidant fraction from Stenochlaena palustris. Extraction was performed with hexane, chloroform, ethyl acetate, methanol, and water. Antiglucosidase, 2,2-diphenyl-1-picrylhydrazyl (DPPH) scavenging and ferric reducing antioxidant power (FRAP) assays found methanol extract (ME) to be the most active. Water fraction (WF) of ME was a stronger α-glucosidase inhibitor (EC50 2.9 μg/mL) than quercetin, with weak antiamylase activity. WF was a competitive α-glucosidase inhibitor. DPPH scavenging activity of WF (EC50 7.7 μg/mL) was weaker than quercetin. WF (EC50 364 μg/mL) was a stronger hydrogen peroxide scavenger than gallic acid (EC50 838 μg/mL) and was equally strong as quercetin in scavenging superoxide. WF possessed moderate copper chelating activity. WF was enriched in total phenolics (TP) and hydroxycinnamic acids (THC). TP correlated with antioxidant activity (R(2) > 0.76). Only THC correlated with antiglucosidase activity (R(2) = 0.86). Overall, WF demonstrated concurrent, potent antiglucosidase and antioxidant activities. Copyright © 2015 Elsevier Ltd. All rights reserved.
NASA Astrophysics Data System (ADS)
Tang, Ronglin; Li, Zhao-Liang; Sun, Xiaomin; Bi, Yuyun
2017-01-01
Surface evapotranspiration (ET) is an important component of water and energy in land and atmospheric systems. This paper investigated whether using variable surface resistances in the reference ET estimates from the full-form Penman-Monteith (PM) equation could improve the upscaled daily ET estimates in the constant reference evaporative fraction (EFr, the ratio of actual to reference grass/alfalfa ET) method on clear-sky days using ground-based measurements. Half-hourly near-surface meteorological variables and eddy covariance (EC) system-measured latent heat flux data on clear-sky days were collected at two sites with different climatic conditions, namely, the subhumid Yucheng station in northern China and the arid Yingke site in northwestern China and were used as the model input and ground-truth, respectively. The results showed that using the Food and Agriculture Organization (FAO)-PM equation, the American Society of Civil Engineers-PM equation, and the full-form PM equation to estimate the reference ET in the constant EFr method produced progressively smaller upscaled daily ET at a given time from midmorning to midafternoon. Using all three PM equations produced the best results at noon at both sites regardless of whether the energy imbalance of the EC measurements was closed. When the EC measurements were not corrected for energy imbalance, using variable surface resistance in the full-form PM equation could improve the ET upscaling in the midafternoon, but worse results may occur in the midmorning to noon. Site-to-site and time-to-time variations were found in the performances of a given PM equation (with fixed or variable surface resistances) before and after the energy imbalance was closed.
Fluvial carbon export from a lowland Amazonian rainforest in relation to atmospheric fluxes
NASA Astrophysics Data System (ADS)
Vihermaa, Leena E.; Waldron, Susan; Domingues, Tomas; Grace, John; Cosio, Eric G.; Limonchi, Fabian; Hopkinson, Chris; da Rocha, Humberto Ribeiro; Gloor, Emanuel
2016-12-01
We constructed a whole carbon budget for a catchment in the Western Amazon Basin, combining drainage water analyses with eddy covariance (EC) measured terrestrial CO2 fluxes. As fluvial C export can represent permanent C export it must be included in assessments of whole site C balance, but it is rarely done. The footprint area of the flux tower is drained by two small streams ( 5-7 km2) from which we measured the dissolved inorganic carbon (DIC), dissolved organic carbon (DOC), particulate organic carbon (POC) export, and CO2 efflux. The EC measurements showed the site C balance to be +0.7 ± 9.7 Mg C ha-1 yr-1 (a source to the atmosphere) and fluvial export was 0.3 ± 0.04 Mg C ha-1 yr-1. Of the total fluvial loss 34% was DIC, 37% DOC, and 29% POC. The wet season was most important for fluvial C export. There was a large uncertainty associated with the EC results and with previous biomass plot studies (-0.5 ± 4.1 Mg C ha-1 yr-1); hence, it cannot be concluded with certainty whether the site is C sink or source. The fluvial export corresponds to only 3-7% of the uncertainty related to the site C balance; thus, other factors need to be considered to reduce the uncertainty and refine the estimated C balance. However, stream C export is significant, especially for almost neutral sites where fluvial loss may determine the direction of the site C balance. The fate of C downstream then dictates the overall climate impact of fluvial export.
Disruption avoidance by means of electron cyclotron waves
NASA Astrophysics Data System (ADS)
Esposito, B.; Granucci, G.; Maraschek, M.; Nowak, S.; Lazzaro, E.; Giannone, L.; Gude, A.; Igochine, V.; McDermott, R.; Poli, E.; Reich, M.; Sommer, F.; Stober, J.; Suttrop, W.; Treutterer, W.; Zohm, H.; ASDEX Upgrade, the; FTU Teams
2011-12-01
Disruptions are very challenging to ITER operation as they may cause damage to plasma facing components due to direct plasma heating, forces on structural components due to halo and eddy currents and the production of runaway electrons. Electron cyclotron (EC) waves have been demonstrated as a tool for disruption avoidance by a large set of recent experiments performed in ASDEX Upgrade and FTU using various disruption types, plasma operating scenarios and power deposition locations. The technique is based on the stabilization of magnetohydrodynamic (MHD) modes (mainly m/n = 2/1) through the localized injection of EC power on the resonant surface. This paper presents new results obtained in ASDEX Upgrade regarding stable operation above the Greenwald density achieved after avoidance of density limit disruptions by means of ECRH and suitable density feedback control (L-mode ohmic plasmas, Ip = 0.6 MA, Bt = 2.5 T) and NTM-driven disruptions at high-β limit delayed/avoided by means of both co-current drive (co-ECCD) and pure heating (ECRH) with power <=1.7 MW (H-mode NBI-heated plasmas, PNBI ~ 7.5 MW, Ip = 1 MA, Bt = 2.1 T, q95 ~ 3.6). The localized perpendicular injection of ECRH/ECCD onto a resonant surface leads to the delay and/or complete avoidance of disruptions. The experiments indicate the existence of a power threshold for mode stabilization to occur. An analysis of the MHD mode evolution using the generalized Rutherford equation coupled to the frequency and phase evolution equations shows that control of the modes is due to EC heating close to the resonant surface. The ECRH contribution (Δ'H term) is larger than the co-ECCD one in the initial and more important phase when the discharge is 'saved'. Future research and developments of the disruption avoidance technique are also discussed.
NASA Astrophysics Data System (ADS)
Qian, Yu-Kun; Liang, Chang-Xia; Yuan, Zhuojian; Peng, Shiqiu; Wu, Junjie; Wang, Sihua
2016-05-01
Based on 25-year (1987-2011) tropical cyclone (TC) best track data, a statistical study was carried out to investigate the basic features of upper-tropospheric TC-environment interactions over the western North Pacific. Interaction was defined as the absolute value of eddy momentum flux convergence (EFC) exceeding 10 m s-1 d-1. Based on this definition, it was found that 18% of all six-hourly TC samples experienced interaction. Extreme interaction cases showed that EFC can reach ~120 m s-1 d-1 during the extratropical-cyclone (EC) stage, an order of magnitude larger than reported in previous studies. Composite analysis showed that positive interactions are characterized by a double-jet flow pattern, rather than the traditional trough pattern, because it is the jets that bring in large EFC from the upper-level environment to the TC center. The role of the outflow jet is also enhanced by relatively low inertial stability, as compared to the inflow jet. Among several environmental factors, it was found that extremely large EFC is usually accompanied by high inertial stability, low SST and strong vertical wind shear (VWS). Thus, the positive effect of EFC is cancelled by their negative effects. Only those samples during the EC stage, whose intensities were less dependent on VWS and the underlying SST, could survive in extremely large EFC environments, or even re-intensify. For classical TCs (not in the EC stage), it was found that environments with a moderate EFC value generally below ~25 m s-1 d-1 are more favorable for a TC's intensification than those with extremely large EFC.
NASA Astrophysics Data System (ADS)
Yuan, Zineng; Xing, Lei; Li, Li; Zhang, Hailong; Xiang, Rong; Zhao, Meixun
2013-12-01
The ecological environment in the East China Sea (ECS) and the Yellow Sea (YS) has changed significantly due to sea-level rising and the Kuroshio incursion since the last deglaciation. In this study, biomarker records of core F10B from the mud area southwest off Cheju Island (MSWCI) were generated to evaluate phytoplankton productivity and community structure changes in response to environmental evolution during the last 14 kyr. The contents of diatom, dinoflagellate and haptophyte biomarkers (brassicasterol, dinosterol and C37 alkenones) display similar trends, with increasing phytoplankton productivity during the last 14 kyr due to the increased influences of the Kuroshio, and especially due to the eddy-induced upwelling during the late Holocene. On the other hand, the contents of terrestrial biomarkers (C28 +C30 +C32 n-alkanols) and terrestrial organic matter (TOM) proxies (TMBR' and BIT) all reveal decreasing TOM input into the area around the sampling site for the 14 kyr, mostly due to sea-level rising. Phytoplankton biomarker ratios reveal a shift from a haptophyte-dominated community at 6.2-2.5 kyr BP to a diatom-dominated community at 2.5-1.45 kyr BP, likely caused by a stronger cold eddy circulation system at 2.5-1.45 kyr BP in the MSWCI.
Evaluation of an eddy resolving global model at the Bermuda Atlantic Time-series Study site
NASA Astrophysics Data System (ADS)
Hiron, L.; Goncalves Neto, A.; Bates, N. R.; Johnson, R. J.
2016-02-01
The Bermuda Atlantic Time-series Study (BATS) commenced monthly sampling in 1988 and thus provides an invaluable 27 years of ocean temperature and salinity profiles for inferring climate relevant processes. However, the passage of mesoscale eddies through this site complicates the local heat and salinity budgets due to inadequate spatial and temporal sampling of these eddy systems. Thus, application of high resolution operational numerical models potentially offers a framework for estimating the horizontal transport due to mesoscale processes. The goal of this research was to analyze the accuracy of the MERCATOR operational 1/12° global ocean model at the BATS site by comparing temperature, salinity and heat budgets for years 2008 - 2015. Overall agreement in the upper 540m for temperature and salinity is found to be very encouraging with significant (P< 0.01) correlations at all depths for both fields. The highest value of correlation coefficient for the temperature field is 0.98 at the surface which decreases to 0.66 at 150m and then reaches a minimum of 0.50 at 320 to 540m. Similarly, the highest correlation coefficient for salinity is found at the surface, with a value of 0.83 and then decreases to a minimum of 0.25 in the subtropical mode water though then increases to 0.5 at 540m. Mixing in the MERCATOR model is also very well captured with a mixed layer depth (MLD) correlation coefficient of 0.92 for the seven year period. Finally, the total heat budget (0-540m) from MERCATOR varies coherently with the BATS observations as shown by a high correlation coefficient of 0.84 (P < 0.01). According to these analyses, daily output from the MERCATOR model represents accurately the temperature, salinity, heat budget and MLD at the BATS site. We propose this model can be used in future research at the BATS site by providing information about mesoscale structure and importantly, advective fluxes at this site.
Experimental evaluation of fluctuating density and radiated noise from a high temperature jet
NASA Technical Reports Server (NTRS)
Massier, P. F.; Parthasarathy, S. P.; Cuffel, R. F.
1973-01-01
An experimental investigation has been conducted to characterize the fluctuating density within a high-temperature (1100 K) subsonic jet and to characterize by the noise radiated to the surroundings. Cross correlations obtained by introducing time delay to the signals detected from spatially separated crossed laser beams set up as a Schlieren system were used to determine radial and axial distributions of the convection velocity of the moving noise sources (eddies). In addition, the autocorrelation of the fluctuating density was evaluated in the moving frame of reference of the eddies. Also, the autocorrelation of the radiated noise in the moving reference frame was evaluated from cross correlations by introducing time delay to the signals detected by spatially separated pairs of microphones. Radial distributions of the mean velocity were obtained from measurements of the stagnation temperature, and stagnation and static pressures with the use of probes.
NASA Astrophysics Data System (ADS)
Bernhofer, Ch.
1992-06-01
A simple eddy correlation system is presented that allows on-line calculation of latent and sensible heat fluxes. The system is composed of a three dimensional propeller anemometer, a thermocouple and a capacitance relative humidity sensor. Results from two contrasting sites demonstrate the capability of the system to measure turbulent fluxes under varying conditions. A dry mixed (dominantly coniferous) forest in hilly terrain in Austria is compared to a well irrigated, heavily transpiring, deciduous pecan orchard in the Southwest of the US. The US site shows insufficient closure of the energy balance that is attributed to non-turbulent fluxes under advective conditions in a stable boundary layer (Blanford et al., 1991) while the Austrian site exhibits almost perfect closure with the use of the very same instruments when the boundary layer is convective and advection is negligible.
NASA Technical Reports Server (NTRS)
Okong'o, Nora; Bellan, Josette
2005-01-01
Models for large eddy simulation (LES) are assessed on a database obtained from direct numerical simulations (DNS) of supercritical binary-species temporal mixing layers. The analysis is performed at the DNS transitional states for heptane/nitrogen, oxygen/hydrogen and oxygen/helium mixing layers. The incorporation of simplifying assumptions that are validated on the DNS database leads to a set of LES equations that requires only models for the subgrid scale (SGS) fluxes, which arise from filtering the convective terms in the DNS equations. Constant-coefficient versions of three different models for the SGS fluxes are assessed and calibrated. The Smagorinsky SGS-flux model shows poor correlations with the SGS fluxes, while the Gradient and Similarity models have high correlations, as well as good quantitative agreement with the SGS fluxes when the calibrated coefficients are used.
Huh, Jimi; Leventhal, Adam M.
2017-01-01
Critical gaps exist in understanding the patterns and correlates of dual use of electronic cigarettes (ECs) and combustible cigarettes (CCs), particularly in ethnic minority populations. In this study, we assessed CC and EC use in the naturalistic environment using ecological momentary assessment (EMA). We hypothesized that within-subject variation in EC use (yes/no each day) would be inversely associated with within-subject variation in number of CCs consumed and craving during that same day. We also examined gender and nicotine dependence as moderators of the EC-CC and EC-craving covariations. Korean American emerging adult (KAEA; 18–25 years old) smokers (N = 78) completed 7 days of EMA. Participants completed EMA surveys throughout the day, which assessed CC craving, and end-of-day surveys, which assessed EC use and the number of CCs smoked that day. Generalized linear mixed models were used to predict day-level EC use, with number of CCs smoked and craving during that same day, gender, and nicotine dependence as predictors (n = 501). We found that within-subject variation in CC use was not associated with same-day EC use; neither was within-subject variation in craving (ps > .27). Gender moderated the relationship between craving and EC use on a given day (p = .03); only for females, on the days with higher craving, the likelihood of their EC use that day was significantly heightened. This study does not suggest that EC use is linked with lower CC smoking quantity, at least at the day level and among KAEA smokers. CC craving may play a role in dual EC-CC use for KAEA female smokers. PMID:26618795
Huh, Jimi; Leventhal, Adam M
2016-03-01
Critical gaps exist in understanding the patterns and correlates of dual use of electronic cigarettes (ECs) and combustible cigarettes (CCs), particularly in ethnic minority populations. In this study, we assessed CC and EC use in the naturalistic environment using ecological momentary assessment (EMA). We hypothesized that within-subject variation in EC use (yes/no each day) would be inversely associated with within-subject variation in number of CCs consumed and craving during that same day. We also examined gender and nicotine dependence as moderators of the EC-CC and EC-craving covariations. Korean American emerging adult (KAEA; 18-25 years old) smokers (N = 78) completed 7 days of EMA. Participants completed EMA surveys throughout the day, which assessed CC craving, and end-of-day surveys, which assessed EC use and the number of CCs smoked that day. Generalized linear mixed models were used to predict day-level EC use, with number of CCs smoked and craving during that same day, gender, and nicotine dependence as predictors (n = 501). We found that within-subject variation in CC use was not associated with same-day EC use; neither was within-subject variation in craving (ps > .27). Gender moderated the relationship between craving and EC use on a given day (p = .03); only for females, on the days with higher craving, the likelihood of their EC use that day was significantly heightened. This study does not suggest that EC use is linked with lower CC smoking quantity, at least at the day level and among KAEA smokers. CC craving may play a role in dual EC-CC use for KAEA female smokers. (c) 2016 APA, all rights reserved).
NASA Astrophysics Data System (ADS)
Linkmann, Moritz; Buzzicotti, Michele; Biferale, Luca
2018-06-01
We provide analytical and numerical results concerning multi-scale correlations between the resolved velocity field and the subgrid-scale (SGS) stress-tensor in large eddy simulations (LES). Following previous studies for Navier-Stokes equations, we derive the exact hierarchy of LES equations governing the spatio-temporal evolution of velocity structure functions of any order. The aim is to assess the influence of the subgrid model on the inertial range intermittency. We provide a series of predictions, within the multifractal theory, for the scaling of correlation involving the SGS stress and we compare them against numerical results from high-resolution Smagorinsky LES and from a-priori filtered data generated from direct numerical simulations (DNS). We find that LES data generally agree very well with filtered DNS results and with the multifractal prediction for all leading terms in the balance equations. Discrepancies are measured for some of the sub-leading terms involving cross-correlation between resolved velocity increments and the SGS tensor or the SGS energy transfer, suggesting that there must be room to improve the SGS modelisation to further extend the inertial range properties for any fixed LES resolution.
Diversi, Tara; Franks-Kardum, Vanessa; Climstein, Mike
2016-01-01
The purpose of this study was to determine if cold water swimmers (CWS) developed hypothermia over a 6-h cold water endurance swim and whether body composition, stroke rate (SR) or personal characteristics correlated with core temperature (TC) change. Nine experienced male and female CWS who were aspiring English Channel (EC) swimmers volunteered to participate. Subjects aimed to complete their 6-h EC qualifying swim (water 15-15.8 °C/air 15-25 °C) while researchers intermittently monitored TC and SR. Data obtained included anthropometry (height, mass, segmental body composition), training volume and EC completion. Of the nine swimmers who volunteered, all successfully completed their EC qualifying swim. Six CWS had complete data included in analysis. One CWS demonstrated hypothermia (34.8 °C) at 6-h. TC rate of decline was slower in the first 3 h (-0.06 °C/hr) compared to the last 3 h (-0.36 °C/hr) of the swim. Older age was significantly correlated to TC change (r = -0.901, p < 0.05) and SR change (r = -0.915, p < 0.05). Absolute and percentage body fat (BF) were not significantly associated with higher TC. Mean SR over the 6-h swim was 57.8 spm (range 48-73 spm), and a significant (p < 0.05) decline in SR was observed over the 6 h (-9.7 %). A strong, positive correlation was found between SR change between 3 and 6 h and TC over the 6 h (r = 0.840, p < 0.05) and TC from 3-6 h (r = 0.827, p < 0.05). Seven of the nine participants (77.8 %) in this study successfully completed the EC crossing. Successful EC swimmers swam in the pool and open water (OW); however, they swam significantly [t (7) = -2.433, p < 0.05] more kilometres (M = 19.09 km/wk ± 5.55) in OW than unsuccessful (M = 9 km/wk ± 1.41) EC swimmers. There was a significant relationship between EC crossing time and height (r = -0.817, p < 0.05), but no other variables and EC crossing time. Cold water endurance swim (CWES) of 6-h duration at 15-16 °C resulted in TC reduction in the majority of swimmers regardless of anthropometry. More research is required to determine why some CWS are able to maintain their TC throughout a CWES. Our results indicate that older swimmers are at greater risk of developing hypothermia, and that SR decline is an indicator of TC decline. Our results also suggest that OW swimming training combined with pool training is important for EC swim success.
Modification of ocean-estuary salt fluxes by density-driven advection of a headland eddy
NASA Astrophysics Data System (ADS)
Fram, J. P.; Stacey, M. T.
2005-05-01
Scalar exchange between San Francisco Bay and the coastal ocean is examined using shipboard observations made across the Golden Gate Channel. Ocean-estuary exchange is often described as a combination of two independent types of mechanisms: density-driven exchange such as gravitational circulation and tidal asymmetries such as tidal trapping. In this study we found that exchange is also governed by an interaction between these mechanisms. Tidally trapped eddies created in shallow shoals are mixed into the main channel earlier in the tidal cycle during the rainy season because the eddies are pushed seaward by gravitational circulation. This interaction increases the tidally averaged dispersive salt flux into the bay. The study consists of experiments during each of three 'seasons': winter/spring runoff (March 2002), summer upwelling (July 2003), and fall relaxation (October 2002). Within each experiment, transects across the channel were repeated approximately every 12 minutes for 25 hours during both spring tide and the following neap tide. Velocity was measured from a boat-mounted ADCP. Scalar concentrations were measured from a tow-yoed SeaSciences Acrobat. Salinity exchange over each spring-neap cycle is quantified with harmonic analysis. Harmonic results are decomposed into flux mechanisms using temporal and spatial correlations. The temporal correlation of cross-sectional averaged salinity and velocity (tidal pumping flux) is the largest part of the dispersive flux of salinity into the bay. From the tidal pumping portion of the dispersive flux, it is shown that there is less exchange than was found in earlier studies. Furthermore, tidal pumping flux scales strongly with flow due to density-driven movement of tidally trapped eddies and density-driven increases in ebb-flood frictional phasing. Complex bathymetry makes salinity exchange scale differently with flow than would be expected from simple tidal pumping and gravitational circulation models.
Krauss, Sandra; Schnitzler, Wilfried H; Grassmann, Johanna; Woitke, Markus
2006-01-25
Irrigation with saline water affects tomato fruit quality. While total fruit yield decreases with salinity, inner quality characterized by taste and health-promoting compounds can be improved. For a detailed description of this relationship, the influence of three different salt levels [electrical conductivity (EC) 3, 6.5, and 10] in hydroponically grown tomatoes was investigated. Rising salinity levels in the nutrient solution significantly increased vitamin C, lycopene, and beta-carotene in fresh fruits up to 35%. The phenol concentration was tendentiously enhanced, and the antioxidative capacity of phenols and carotenoids increased on a fresh weight basis. Additionally, the higher EC values caused an increase of total soluble solids and organic acids, parameters determining the taste of tomatoes. Total fruit yield, single fruit weight, and firmness significantly decreased with rising EC levels. Regression analyses revealed significant correlations between the EC level and the dependent variables single fruit weight, total soluble solids, titrable acids, lycopene, and antioxidative capacities of carotenoids and phenols, whereas vitamin C and phenols correlated best with truss number, and beta-carotene correlated best with temperature. Only pressure firmness showed no correlation with any of the measured parameters. As all desirable characteristics in the freshly produced tomato increased when exposed to salinity, salinity itself constitutes an alternative method of quality improvement. Moreover, it can compensate for the loss of yield by the higher inner quality due to changing demands by the market and the consumer. This investigation is to our knowledge the first comprehensive overview regarding parameters of outer quality (yield and firmness), taste (total soluble solids and acids), nutritional value (vitamin C, carotenoids, and phenolics), as well as antioxidative capacity in tomatoes grown under saline conditions.
NASA Astrophysics Data System (ADS)
van Genuchten, C. M.; Pena, J.; Addy, S. E.; Gadgil, A. J.
2012-12-01
Electrocoagulation (EC) using Fe(0) electrodes is an inexpensive and efficient technology capable of removing a variety of contaminants from water supplies. Because of its ease of use and modest electricity and Fe(0) requirements, EC has potential as an arsenic-removal technology for rural South Asia, where millions drink groundwater contaminated by arsenic. In EC, a small external voltage applied to a sacrificial Fe(0) anode in contact with an electrolyte (e.g. pumped groundwater containing arsenic) promotes the oxidative dissolution of Fe ions, which polymerize and create reactive hydrous ferric oxides (HFO) in-situ with a high affinity for binding contaminants. The chemical composition of the electrolyte influences EC performance. For example, major inorganic ions present in groundwater (e.g. Ca, Mg, P, As(V), Si) alter the pathway by which FeO6 oligomers polymerize to form crystalline Fe (oxyhydr)oxide minerals. Because the precipitate structure largely determines properties that govern the efficiency of EC systems (e.g. precipitate reactivity and colloidal stability), it is essential to understand the individual and interdependent structural effects of common groundwater ions. In this work, we integrate Fe K-edge EXAFS spectroscopy with the Pair Distribution Function (PDF) technique to create a detailed description of EC precipitate structure as a function of electrolyte chemistry. EC precipitate samples were generated in a range of individual and combined concentrations of Ca, Mg, P, As(V), and Si, encompassing most of the typical levels found in natural groundwater. Combining complementary EXAFS and PDF techniques with batch uptake experiments and general chemical reasoning, we obtain structural representations of EC precipitates that are inaccessible with any single characterization technique. Our results indicate that the presence of As(V), P, and Si oxyanions promote the formation of nanoscale material bearing similar, but not identical, intermediate-ranged atomic pair correlations as 2-line ferrihydrite (2LFH), rather than lepidocrocite (Lp) which is generated in an NaCl electrolyte. However, when Ca or Mg is added to oxyanion electrolytes, Fe-Fe polymerization and particle size both tend to increase and a Lp-like material with characteristic Fe-O and Fe-Fe pair correlations is once again favored. The presence of either Ca or Mg also enhances the removal P, As(V), and to a lesser extent, Si per mass of Fe. The analysis from EXAFS and PDF spectra provide new insights into the polyhedral connectivity of nanoscale oxyanion-bearing HFO formed under a wide range of chemical conditions, improving predictions of EC performance in the field and allowing for knowledge-based improvements in the design of future EC systems. Our PDF data also show that the most disordered EC precipitate samples (formed at high oxyanion/Fe ratios) all share a similar "backbone" of 3-4 peaks beyond the first 4 Å, regardless of the oxyanion present during synthesis. Using 2LFH as a reference, we index all atomic pair correlations throughout the coherently scattering structure of our disordered samples.
Mesoscale Eddies, Satellite Altimetry, and New Production in the Sargasso Sea
NASA Technical Reports Server (NTRS)
Siegel, David A.; McGillicuddy, Dennis J., Jr.; Fields, Erik A.
1999-01-01
Satellite altimetry and hydrographic observations are used to characterize the mesoscale eddy field in the Sargasso Sea near Bermuda and to address the role of physical processes on the supply of new nutrients to the euphotic zone. The observed sea level anomaly (SLA) field is dominated by the occurrence of westward propagating features with SLA signatures as large as 25 cm, Eulerian temporal scales of roughly a month, lifetimes of several months, spatial scales of approximately 200 km, and a propagation of approximately 5 cm/s. Hydrographic estimates of dynamic height anomaly (referenced to 4000 dbar) are well correlated with satellite SLA (r(exp 2) = 0.65), and at least 85% of the observed dynamic height variability is associated with the first baroclinic mode of motion. This allows us to apply the satellite observations to remotely sensed estimate isopycnal displacements and the flux of nutrients into the euphotic zone due to eddy pumping. Eddy pumping is the process by which mesoscale eddies induce isopycnal displacements that lift nutrient-replete waters into the euphotic zone, driving new primary production. A kinematic approach to the estimation of the eddy pumping results in a flux of 0.24 +/- 0.1 mol N/sq m (including a scale estimate for the small contribution due to 18 deg water eddies). This flux is more than an order of magnitude larger than the diapycnal diffusive flux as well as scale estimates for the vertical transport due to isopycnal mixing along sloping isopycnal surfaces. Eddy pumping and wintertime convection are the two dominant mechanisms transporting new nutrients into the euphotic zone, and the sum of all physical new nutrient supply fluxes effectively balances previous geochemical estimates of annual new production for this site. However, if biological transports (e.g., nitrogen fixation, etc.) are significant, the new nitrogen supply budget will be in excess of geochemical new production estimates. This suggests that the various physical and biological transport fluxes, as well as geochemical inferences of new production, still need to be reconciled and many outstanding questions remain.
Mesoscale Eddies, Satellite Altimetry, and New Production in the Sargasso Sea
NASA Technical Reports Server (NTRS)
Siegel, David A.; McGillicuddy, Dennis J., Jr.; Fields, Erik A.
1999-01-01
Satellite altimetry and hydrographic observations are used to characterize the mesoscale eddy field in the Sargasso Sea near Bermuda and to address the role of physical processes on the supply of new nutrients to the euphotic zone. The observed sea level anomaly (SLA) field is dominated by the occurrence of westward propagating features with SLA signatures as large as 25 cm, Eulerian temporal scales of roughly a month, lifetimes of several months, spatial scales of approximately 200 km, and a propagation of approximately 5 cm/s . Hydrographic estimates of dynamic height anomaly (referenced to 4000 dbar) are well correlated with satellite SLA (r(sup 2) = 0.65), and at least 85% of the observed dynamic height variability is associated with the first baroclinic mode of motion. This allows us to apply the satellite observations to remotely estimate isopycnal displacements and the flux of nutrients into the euphotic zone due to eddy pumping. Eddy pumping is the process by which mesoscale eddies induce isopycnal displacements that lift nutrient- replete waters into the euphotic zone, driving new primary production. A kinematic approach to the estimation of the eddy pumping results in a flux of 0.24+/-0.1 mol N/sq m/yr (including a scale estimate for the small contribution due to 18 deg water eddies). This flux is more than an order of magnitude larger than the diapycnal diffusive flux as well as scale estimates for the vertical transport due to isopycnal mixing along sloping isopycnal surfaces. Eddy pumping and wintertime convection are the two dominant mechanisms transporting new nutrients into the euphotic zone, and the sum of all physical new nutrient supply fluxes effectively balances previous geochemical estimates of annual new production for this site. However, if biological transports (e.g., nitrogen fixation, etc.) are significant, the new nitrogen supply budget will be in excess of geochemical new production estimates. This suggests that the various physical and biological transport fluxes, as well as geochemical inferences of new production, still need to be reconciled and many outstanding questions remain.
FOXA1 promotes tumor cell proliferation through AR involving the Notch pathway in endometrial cancer
2014-01-01
Background Increasing evidence suggests that forkhead box A1 (FOXA1) is frequently dysregulated in many types of human cancers. However, the exact function and mechanism of FOXA1 in human endometrial cancer (EC) remains unclear. Methods FOXA1 expression, androgen receptor (AR) expression, and the relationships of these two markers with clinicopathological factors were determined by immunohistochemistry analysis. FOXA1 and AR were up-regulated by transient transfection with plasmids, and were down-regulated by transfection with siRNA or short hairpin RNA (shRNA). The effects of FOXA1 depletion and FOXA1 overexpression on AR-mediated transcription as well as Notch pathway and their impact on EC cell proliferation were examined by qRT-PCR, western blotting, co-immunoprecipitation, ChIP-PCR, MTT, colony-formation, and xenograft tumor–formation assays. Results We found that the expression of FOXA1 and AR in ECs was significantly higher than that in a typical hyperplasia and normal tissues. FOXA1 expression was significantly correlated with AR expression in clinical tissues. High FOXA1 levels positively correlated with pathological grade and depth of myometrial invasion in EC. High AR levels also positively correlated with pathological grade in EC. Moreover, the expression of XBP1, MYC, ZBTB16, and UHRF1, which are downstream targets of AR, was promoted by FOXA1 up-regulation or inhibited by FOXA1 down-regulation. Co-immunoprecipitation showed that FOXA1 interacted with AR in EC cells. ChIP-PCR assays showed that FOXA1 and AR could directly bind to the promoter and enhancer regions upstream of MYC. Mechanistic investigation revealed that over-expression of Notch1 and Hes1 proteins by FOXA1 could be reversed by AR depletion. In addition, we showed that down-regulation of AR attenuated FOXA1-up-regulated cell proliferation. However, AR didn’t influence the promotion effect of FOXA1 on cell migration and invasion. In vivo xenograft model, FOXA1 knockdown reduced the rate of tumor growth. Conclusions These results suggest that FOXA1 promotes cell proliferation by AR and activates Notch pathway. It indicated that FOXA1 and AR may serve as potential gene therapy in EC. PMID:24512546
NASA Astrophysics Data System (ADS)
Thomas, Leif N.
2008-08-01
A mechanism for the generation of intrathermocline eddies (ITEs) at wind-forced fronts is examined using a high resolution numerical simulation. Favorable conditions for ITE formation result at fronts forced by "down-front" winds, i.e. winds blowing in the direction of the frontal jet. Down-front winds exert frictional forces that reduce the potential vorticity (PV) within the surface boundary in the frontal outcrop, providing a source for the low-PV water that is the materia prima of ITEs. Meandering of the front drives vertical motions that subduct the low-PV water into the pycnocline, pooling it into the coherent anticyclonic vortex of a submesoscale ITE. As the fluid is subducted along the outcropping frontal isopycnal, the low-PV water, which at the surface is associated with strongly baroclinic flow, re-expresses itself as water with nearly zero absolute vorticity. This generation of strong anticyclonic vorticity results from the tilting of the horizontal vorticity of the frontal jet, not from vortex squashing. During the formation of the ITE, high-PV water from the pycnocline is upwelled alongside the subducting low-PV surface water. The positive correlation between the ITE's velocity and PV fields results in an upward, along-isopycnal eddy PV flux that scales with the surface frictional PV flux driven by the wind. The relationship between the eddy and wind-induced frictional PV flux is nonlocal in time, as the eddy PV flux persists long after the wind forcing is shut off. The ITE's PV flux affects the large-scale flow by driving an eddy-induced transport or bolus velocity down the outcropping isopycnal layer with a magnitude that scales with the Ekman velocity.
NASA Astrophysics Data System (ADS)
Dold, C.; Hatfield, J.; Prueger, J. H.; Wacha, K.
2017-12-01
Midwestern US agriculture is dominated by corn and soybean production. Corn has typically higher Net Ecosystem Exchange (NEE) than soybean due to increased carboxylation efficiency and different crop management. The conjoined NEE may be measured with eddy covariance (EC) stations covering both crops, however, it is often unclear what the contribution of each crop is, as the CO2 source area remains unknown. The aim of this study was to quantify the contribution of CO2 fluxes from each crop for a conventional corn-soybean rotation system from 2007 - 2015. Therefore, the combined CO2 flux of three adjacent fields with annual corn-soybean rotation was measured with a 9.1 m EC tower (Flux 30). In the center of two of these fields, additional EC towers (Flux 10 and Flux 11) were positioned above the corn and soybean canopy to validate Flux 30 NEE. For each EC system the annual 90% NEE footprint area was calculated, footprints were partitioned among fields, and NEE separated accordingly. The average annual 90% footprint area of Flux 30, and Flux 10/11 corn and soybean was estimated to 206, 11 and 7 ha, respectively. The annual average (±SE) NEE of Flux 30 was -693 ± 47 g CO2 m-2 yr-1, of which 83% out of 90% originated from the three adjacent fields. Corn and soybean NEE measured at Flux 10 and 11 was -1124 ± 95 and 173 ± 73 g CO2 m-2 yr-1, respectively, and 89% and 90% originated from these fields. That demonstrates, that Flux 30 represents the combined NEE of a corn-soybean rotation, and Flux 10 and 11 measured NEE from a single crop. However, the share of Flux 30 NEE originating from corn and soybean grown on the Flux 10/11 fields was -192 ± 16 and -205 ± 18 g CO2 m-2 yr-1, indicating a substantial difference to single crop NEE. While it was possible to measure the NEE of a corn-soybean rotation with a tall EC tower, footprint partitioning could not retrieve NEE for each crop, probably due to differences in measurement height and footprint source area.
Zhang, Tao; Zhang, Yangjian; Xu, Mingjie; Zhu, Juntao; Wimberly, Michael C.; Yu, Guirui; Niu, Shuli; Xi, Yi; Zhang, Xianzhou; Wang, Jingsheng
2015-01-01
To explore grazing effects on carbon fluxes in alpine meadow ecosystems, we used a paired eddy-covariance (EC) system to measure carbon fluxes in adjacent fenced (FM) and grazed (GM) meadows on the Tibetan plateau. Gross primary productivity (GPP) and ecosystem respiration (Re) were greater at GM than FM for the first two years of fencing. In the third year, the productivity at FM increased to a level similar to the GM site. The higher productivity at GM was mainly caused by its higher photosynthetic capacity. Grazing exclusion did not increase carbon sequestration capacity for this alpine grassland system. The higher optimal photosynthetic temperature and the weakened ecosystem response to climatic factors at GM may help to facilitate the adaption of alpine meadow ecosystems to changing climate. PMID:26515954
Flux agreement above a Scots pine plantation
NASA Astrophysics Data System (ADS)
Gay, L. W.; Vogt, R.; Bernhofer, Ch.; Blanford, J. H.
1996-03-01
The surface energy exchange of 12m high Scots pine plantation at Hartheim, Germany, was measured with a variety of methods during a 11-day period of fine weather in mid-May 1992. Net radiation and rate of thermal storage were measured with conventional net radiometers, soil heat flux discs and temperature-based storage models. The turbulent fluxes discussed in this report were obtained with an interchanging Bowen ratio energy budget system (BREB, at 14 m), two one-propeller eddy correlation systems (OPEC systems 1 and 2 at 17m), a 1-dimensional sonic eddy correlation system (SEC system 3) at 15 m, all on one “low” tower, and a 3-dimensional sonic eddy correlation system (SEC system 22) at 22 m on the “high” tower that was about 46 m distant. All systems measured sensible and latent heat (H and LE) directly, except for OPEC systems 1 and 2 which estimated LE as a residual term in the surface energy balance. Closure of turbulent fluxes from the two SEC systems was around 80% for daytime and 30% for night, with closure of 1-dimensional SEC system 3 exceeding that of 3-dimensional SEC system 22. The night measurements of turbulent fluxes contained considerable uncertainty, especially with the BREB system where measured gradients often yielded erroneous fluxes due to problems inherent in the method (i.e., computational instability as Bowen's ratio approaches -1). Also, both eddy correlation system designs (OPEC and SEC) appeared to underestimate |H| during stable conditions at night. In addition, both sonic systems (1- and 3-dimensional) underestimated |LE| during stable conditions. The underestimate of |H| at night generated residual estimates of OPEC LE containing a “phantom dew” error that erroneously decreased daily LE totals by about 10 percent. These special night problems are circumvented here by comparing results for daytime periods only, rather than for full days. To summarize, turbulent fluxes on the low tower from OPEC system 2 and the adjacent SEC system 3 were in reasonable agreement, while the BREB system appeared to overestimate H and underestimate LE; H and LE measured by SEC system 22 on the high tower were lower than from OPEC and SEC3 on the low tower. The turbulent flux measurements tended to converge, but the data exhibit unexplained differences between days, between systems, and between locations.
Quaternary seismic stratigraphy and paleoenvironments on the continental shelf of the East China Sea
NASA Astrophysics Data System (ADS)
Liu, Zhen-Xia; Berne, Serge; Saito, Yoshiki; Lericolais, G.; Marsset, T.
2000-08-01
Paleoenvironments and stratigraphy have been interpreted from 4380 km of seismic profiling collected during a geological and geophysical cruise on the continental shelf of the East China Sea (ECS) undertaken in 1996. The geophysical data are correlated with a borehole situated on the outer shelf obtained by Shanghai Marine Geology Bureau, indicating that six seismic units have been preserved since oxygen-isotope stage 6, including four regressive-transgressive cycles. Seismic units U2, U3+U4+U5, U6, and U7 are interpreted to correspond respectively to oxygen-isotope stages 1, 3, 5, and 6, implying that sediment partitioning and sequence architecture in the ECS have been controlled by glacio-eustasy and global climate changes. Alternating continental and marine strata corresponding to glaciation and interglaciation are well preserved on the outer shelf of the ECS. Most of the cold environment strata, which formed on the outer shelf during oxygen-isotope stages 2 and 4, are too thin to be recognized on SIG 600J because of resolution, but corresponding erosion surfaces exist. Seismic unit U7 is widespread over the shelf, extending to the continental edge and showing little variation in thickness, as the regression was pronounced and lasted a long time. Thus, U7 can be used as a marker layer for correlation of Quaternary strata on the shelf of the ECS. Post-glacial transgression is obvious in the ECS. Marine strata with varied thickness were developed in the shallow sea of the inner shelf, thinning toward the outer shelf. The continental shelf of the ECS has been influenced by Pacific tide-wave systems for a long time, forming tidal sand-ridge sequences, developed during transgressions, corresponding to oxygen-isotope stages 7 (or 9), 5, 3 and 1.
Christiansen, Karen S; Borggaard, Ole K; Holm, Peter E; Vijver, Martina G; Hauschild, Michael Z; Peijnenburg, Willie J G M
2015-04-01
Accurate knowledge about factors and conditions determining copper (Cu) toxicity in soil is needed for predicting plant growth in various Cu-contaminated soils. Therefore, effects of Cu on growth (biomass production) of lettuce (Lactuca sativa) were tested on seven selected, very different soils spiked with Cu and aged for 2 months at 35 °C. Cu toxicity was expressed as pEC50(Cu(2+)), i.e., the negative logarithm of the EC50(Cu(2+)) activity to plant growth. The determined pEC50(Cu(2+)) was significantly and positively correlated with both the analytically readily available soil pH and concentration of dissolved organic carbon [DOC] which together could explain 87% of the pEC50(Cu(2+)) variation according to the simple equation: pEC50(Cu(2+)) = 0.98 × pH + 345 × [DOC] - 0.27. Other soil characteristics, including the base cation concentrations (Na(+), K(+), Ca(2+), Mg(2+)), the cation exchange capacity at soil pH (ECEC), and at pH 7 (CEC7), soil organic carbon, clay content, and electric conductivity as well as the distribution coefficient (Kd) calculated as the ratio between total soil Cu and water-extractable Cu did not correlate significantly with pEC50(Cu(2+)). Consequently, Cu toxicity, expressed as the negative log of the Cu(2+) activity, to plant growth increases at increasing pH and DOC, which needs to be considered in future management of plant growth on Cu-contaminated soils. The developed regression equation allows identification of soil types in which the phytotoxicity potential of Cu is highest.
Xia, Z Y; Zhai, X D; Liu, B B; Zheng, Z; Zhao, L L; Mo, Y N
2017-02-01
To analyze the relationship among electrical conductivity (EC), total volatile basic nitrogen (TVB-N), which is an index of decomposition rate for meat production, and postmortem interval (PMI). To explore the feasibility of EC as an index of cadaveric skeletal muscle decomposition rate and lay the foundation for PMI estimation. Healthy Sprague-Dawley rats were sacrificed by cervical vertebrae dislocation and kept at 28 ℃. Muscle of rear limbs was removed at different PMI, homogenized in deionized water and then skeletal extraction liquid of mass concentration 0.1 g/mL was prepared. EC and TVB-N of extraction liquid were separately determined. The correlation between EC ( x ₁) and TVB-N ( x ₂) was analyzed, and their regression function was established. The relationship between PMI ( y ) and these two parameters were studied, and their regression functions were separately established. The change trends of EC and TVB-N of skeletal extraction liquid at different PMI were almost the same, and there was a linear positive correlation between them. The regression equation was x ₂=0.14 x ₁-164.91( R ²=0.982). EC and TVB-N of skeletal muscle changed significantly with PMI, and the regression functions were y =19.38 x ₁³-370.68 x ₁²+2 526.03 x ₁-717.06( R ²=0.994), and y =2.56 x ₂³-48.39 x ₂²+330.60 x ₂-255.04( R ²=0.997), respectively. EC and TVB-N of rat postmortem skeletal muscle show similar change trends, which can be used as an index for decomposition rate of cadaveric skeletal muscle and provide a method for further study of late PMI estimation. Copyright© by the Editorial Department of Journal of Forensic Medicine
NASA Astrophysics Data System (ADS)
Koopmans, D.; Berg, P.
2013-12-01
Inland waters respire or store a large portion of net terrestrial ecosystem production. As a result their metabolism is significant to the global carbon budget. The proximal drivers of aquatic respiration are organic matter availability, temperature, nutrients, and water velocity. Among these water velocity may be the least quantified. A partial explanation is that the footprint of the open water technique is typically hundreds of meters of river length, while the effect of a change in velocity may be specific to a local benthic environment, e.g., a riffle. With the eddy correlation technique oxygen flux is calculated from the turbulent fluctuation of vertical velocity and the oxygen concentration at a point in the water column. The footprint of the technique scales with the height of the point of measurement allowing an investigation of the in situ oxygen flux at the scale of a riffle. The combination of techniques, then, can be used to investigate the coupling of hydrodynamic conditions and benthic environments in driving aquatic ecosystem metabolism. This parallel approach was applied seasonally to examine the drivers of metabolism in a nutrient-rich, sand-bed coastal stream on the Eastern Shore of Virginia. An ecosystem-scale oxygen flux was calculated with the open water technique while pool-, run-, riffle-, and freshwater tidal-scale oxygen fluxes were calculated with the eddy correlation technique. At the ecosystem scale the stream bed functioned as an effective biocatalytic filter with an average annual net oxygen consumption of 300 mmol m^-2 d^-1. Prior to a stage-discharge shift water velocity explained 90% of the variance in ecosystem respiration (n = 63 days). After the stage-discharge shift water velocity explained 96 % of it (n = 40 days). Hyporheic exchange supported respiration in this system, contributing to its close correlation with water velocity. Among the physically similar benthic environments of the run, riffle, and freshwater tidal sites, however, similar water velocities generated order of magnitude differences in oxygen flux. The smallest oxygen fluxes were observed at the tidal site followed by the riffle and pool. The patterns were consistent with the site-specific suppression of hyporheic exchange by pore water clogging. An uneven distribution of sediment organic matter may also contribute. These results demonstrate that ecosystem metabolism in this stream is hydrodynamically controlled and suggest mechanisms by which that control may be undermined. Oxygen flux measured at a stream riffle with the eddy correlation technique.
Zheng, Ze-Mei; Yu, Gui-Rui; Sun, Xiao-Min; Cao, Guang-Min; Wang, Yue-Si; Du, Ming-Yuan; Li, Jun; Li, Ying-Nian
2008-02-01
Based on the measurement of carbon flux by the methods of eddy covariance and static chamber/gas chromatogram, a comparison was made between the two methods in evaluating ecosystem respiration over winter wheat (Triticum aestivum)--summer maize (Zea mays) double cropland and Kobresia humilis alpine meadow. The results showed that under the conditions of obtained data having good quality, nighttime ecosystem respiration from eddy covariance measurement was significantly agreed with that from static chamber/gas chromatogram measurement, with the correlation coefficients ranging from 0.95 to 0.98, and the daytime ecosystem respiration from these two measurements also had a good consistency though the static chamber/gas chromatogram measurement often produced higher values. The daily mean value of ecosystem respiration was significantly different between these two measurements, but the seasonal pattern was similar. For winter wheat-summer maize double cropland, the difference of mean air temperature inside and outside the chamber was 1.8 degrees C, and the daily mean value of ecosystem respiration across the whole study period was 30.3% lower in eddy covariance measurement than in static chamber/gas chromatogram measurement; while for alpine meadow, the difference of the mean air temperature was 1.9 degrees C, and the daily mean value of ecosystem respiration was 31.4% lower in eddy covariance measurement than in static chamber/gas chromatogram measurement. The variance between the daily mean values of ecosystem respiration obtained from the two measurements was higher in growing season than in dormant season.
NASA Astrophysics Data System (ADS)
Tanis, Fred J.; Manley, Thomas O.; Mitchell, Brian G.
1990-09-01
Eddies along the Polar Front/Marginal Ice Zone (MIZ) in Fram Strait are thought to make important contributions to nutrient flux and stimulation of primary productivity. During the Coordinated Eastern Arctic Regional Experiment (CEAREX) helicopter-based measurements of upwelling radiance were made in four visible spectral bands and in the thermal IR across mesoscale features associated with the MIZ. These structures were mapped by flying a grid pattern over the ocean surface to define eddy boundaries. Subsequently, the area was also sampled vertically with CTD and spectral radiometer profilers. Data obtained from a single structure were integrated to construct a three dimensional picture of physical and optical properties. Volume modeling of temperature, salinity, and density fields obtained from CTD survey define the subsurface eddy structure and are in good agreement with infrared derived characteristics. Maximum temperature in the core was found to be four degrees higher than the surrounding water. Volume modeling further indicates that a subsurface layer of Arctic Intermediate Water is intrinsically associated with the surface expression of the eddy. The ratio of upwelling radiances, L(44l)/L(565), was found to be correlated to surface chlorophyll, particulate absorption coefficient, and in water determinations of L using the optical profiling system. The remote sensing reflectance ratio along with the IR sea surface temperature were found to be useful to detect the surface expression of the eddy and to indicate near surface biological and physical processes.
Teoh-Fitzgerald, ML; Fitzgerald, MP; Zhong, W; Askeland, RW; Domann, FE
2013-01-01
Expression of the antioxidant enzyme EcSOD in normal human mammary epithelial cells was not recognized until recently. Although expression of EcSOD was not detectable in non-malignant human mammary epithelial cells (HMEC) cultured in conventional two-dimensional (2D) culture conditions, EcSOD protein expression was observed in normal human breast tissues, suggesting that the 2D-cultured condition induces a repressive status of EcSOD gene expression in HMEC. With the use of laminin-enriched extracellular matrix (lrECM), we were able to detect expression of EcSOD when HMEC formed polarized acinar structures in a 3D-culture condition. Repression of the EcSOD-gene expression was again seen when the HMEC acini were sub-cultured as a monolayer, implying that lrECM-induced acinar morphogenesis is essential in EcSOD-gene activation. We have further shown the involvement of DNA methylation in regulating EcSOD expression in HMEC under these cell culture conditions. EcSOD mRNA expression was strongly induced in the 2D-cultured HMEC after treatment with a DNA methyltransferase inhibitor. In addition, epigenetic analyses showed a decrease in the degree of CpG methylation in the EcSOD promoter in the 3D versus 2D-cultured HMEC. More importantly, >80% of clinical mammary adenocarcinoma samples showed significantly decreased EcSOD mRNA and protein expression levels compared with normal mammary tissues and there is an inverse correlation between the expression levels of EcSOD and the clinical stages of breast cancer. Combined bisulfite restriction analysis analysis of some of the tumors also revealed an association of DNA methylation with the loss of EcSOD expression in vivo. Furthermore, overexpression of EcSOD inhibited breast cancer metastasis in both the experimental lung metastasis model and the syngeneic mouse model. This study suggests that epigenetic silencing of EcSOD may contribute to mammary tumorigenesis and that restoring the extracellular superoxide scavenging activity could be an effective strategy for breast cancer treatment. PMID:23318435
Ornaghi, Veronica; Pepe, Alessandro; Grazzani, Ilaria
2016-01-01
Emotion comprehension (EC) is known to be a key correlate and predictor of prosociality from early childhood. In the present study, we examined this relationship within the broad theoretical construct of social understanding which includes a number of socio-emotional skills, as well as cognitive and linguistic abilities. Theory of mind, especially false-belief understanding, has been found to be positively correlated with both EC and prosocial orientation. Similarly, language ability is known to play a key role in children’s socio-emotional development. The combined contribution of false-belief understanding and language to explaining the relationship between EC and prosociality has yet to be investigated. Thus, in the current study, we conducted an in-depth exploration of how preschoolers’ false-belief understanding and language ability each contribute to modeling the relationship between children’s comprehension of emotion and their disposition to act prosocially toward others, after controlling for age and gender. Participants were 101 4- to 6-year-old children (54% boys), who were administered measures of language ability, false-belief understanding, EC and prosocial orientation. Multiple mediation analysis of the data suggested that false-belief understanding and language ability jointly and fully mediated the effect of preschoolers’ EC on their prosocial orientation. Analysis of covariates revealed that gender exerted no statistically significant effect, while age had a trivial positive effect. Theoretical and practical implications of the findings are discussed. PMID:27774075
Unplanned pregnancy-risks and use of emergency contraception: a survey of two Nigerian Universities.
Ajayi, Anthony Idowu; Nwokocha, Ezebunwa Ethelbert; Adeniyi, Oladele Vincent; Ter Goon, Daniel; Akpan, Wilson
2017-06-02
The vulnerabilities of young women of low socio-economic status and those with little or no formal education tend to dominate the discourse on unplanned pregnancy, unsafe abortion and emergency contraception (EC) in sub-Saharan Africa. This article draws on a survey conducted among female undergraduate students to shed light on sexual behaviour and the dynamics of emergency contraceptive use among this cohort. The survey involved 420 female undergraduate students drawn using a multistage sampling technique, while a self-administered questionnaire was used for data collection. Univariate and bivariate analyses were applied to examine the factors associated with the use of emergency contraception. Of the 176 female students who reported being sexually active in the year preceding the survey, only 38.6% reported the use of condom during the entire year. Of those who reported unplanned pregnancy anxiety n = 94, about 30.1% used EC, 20.4% used non-EC pills as EC, while others reported having used no EC. A few respondents (n = 3) had terminated a pregnancy under unsafe conditions. Awareness of EC (p < 0.001), knowledge of timing of EC (p = 0.001), perceived risk of unplanned pregnancy (p < 0.001), and level of study (p = 0.013), were significantly correlated with the use of EC. The study revealed that educated youths engaged in high-risk sexual activities and also, sought recourse to unproven and unsafe contraceptive methods. Poor knowledge of EC methods and timing of use, as well as wrong perception about EC side effects, are barriers to the utilisation of EC for the prevention of unplanned pregnancy among the study participants.
Horn, Lars-Christian; Hentschel, Bettina; Galle, Dana; Bilek, Karl
2008-01-01
Pelvic lymph node involvement is a well-recognized prognostic factor in cervical carcinoma (CX). Limited knowledge exists about extranodal extension of the tumor outside the lymph node capsule, i.e. extracapsular spread (ECS). Two hundred fifty-six cases of surgically treated CX (FIGO stage IB1 to IIB) with pelvic lymph node involvement were evaluated regarding the occurrence of extranodal spread of the metastatic deposits outside the lymph node capsule (ECS), determined on standardized handled lymphadenectomy specimens, regarding their impact of recurrent disease and overall survival during a median follow-up time of 62 months (95% CI 51-73 months). ECS was seen in 30.9% (79/256) of the cases. The occurrence of ECS showed a significant correlation to advanced stage disease (p=0.02), the number of involved nodes (p<0.001) and the size of metastatic deposits (p<0.01). The 5-year recurrence-free survival rate in patients with ECS was significant lower compared to patients without ECS (59.7% [95% CI: 46.3%-73.2%] versus 67.2% [95% CI: 58.9%-75.5%]; (p=0.04). The 5-year overall survival rate was significant lower in patients with ECS (33.5% [95% CI: 20.6%-46.3%] vs. 60.5% [95% CI: 52.3%-68.6%]; p<0.001). In multivariate analysis, tumor stage, number of involved pelvic nodes, tumor differentiation and ECS were independent prognostic factors. The results indicate that extracapsular spread (ECS) of pelvic lymph node metastases is of prognostic impact in cervical carcinomas. A revised FIGO/TNM classification system for pelvic lymph node disease is recommended: ECS 0 = lymph node involvement without extranodal spread of the metastatic deposits and ECS 1 = lymph node involvement with extranodal spread of the metastatic deposits.
Integrated and spectral energy flows of the GLAS GCM
NASA Technical Reports Server (NTRS)
Tennebaum, J.
1981-01-01
Methods to analyze the generation, transport, and dissipation of energy to study geophysical fluid flows are discussed. Energetics analyses are pursued in several directions: (1) the longitudinal and time dependence on the energy flow to the stratosphere was examined as a function of geographical sector; (2) strong and weak energy flows were correlated by medium range forecasts; (3) the one dimensional spectral results (Fourier services around latitude circles) were extended to spherical harmonics over a global domain; (4) the validity of vertical velocities derived from mass convergence was examined for their effect on the conversion of eddy available potential energy to eddy kinetic energy.
The nature of large-scale turbulence in the Jovian atmosphere
NASA Technical Reports Server (NTRS)
Mitchell, J. L.
1982-01-01
The energetics and spectral characteristis of quasi-geostrophic turbulence in Jupiter's atmosphere are examined using sequences of Voyager images and infrared temperature soundings. Using global wind measurements momentum transports associated with zonally symmetric stresses and turbulent stresses are quantified. Though a strong up-gradient flux of momentum by eddies was observed, measurements do not preclude the possibility that symmetric stresses play a critical role in maintaining the mean zonal circulation. Strong correlation between the observed meridional distribution of eddy-scale kinetic energy and available potential energy suggests coupling between the observed cloudtop turbulent motions and the upper tropospheric thermodynamics. An Oort energy budget for Jupiter's upper troposphere is formulated.
NASA Astrophysics Data System (ADS)
Chen, Yang; Yang, Fumo; Mi, Tian; Cao, Junji; Shi, Guangming; Huang, Rujin; Wang, Huanbo; Chen, Jun; Lou, Shengrong; Wang, Qiyuan
2017-05-01
Urban particles were investigated using a single particle aerosol mass spectrometer (SPAMS) in Chongqing during the summertime (from 07/05/2014 to 08/06/2014). Chemical composition, mixing state, and atmospheric behavior of urban particles were studied. The major particle types include ECOC (Elemental-Carbon-Organic-Carbon 20.6%), OC (20.1%), KSec (K-Secondary) (13.3%), BB (Biomass burning, 11.9%), NaK (sodium-potassium-rich, 7.3%), Al-rich (4.0%), Fe-rich (3.2%), Ca-rich (1.4%), Ca-EC (1.6%), and NaKPb (0.5%). EC, ECOC, OC, and Ca-EC were prevalent in the condensation mode (< 0.7 μm), while KSec, EC, NaK were significant in both the droplet mode (0.7-1.1 μm) and coarse mode. Increases in aged groups such as EC, KSec, and NaK were observed in the afternoon. Case studies suggested that wet scavenging (rain) rates of different single particle types followed an order of NaKPb > Fe-rich > EC > Ca-EC > Ca-rich > KSec > OC > NaK > ECOC > Al-rich > BB. Increased number fraction of EC and KSec were correlated with the increase of odd oxygen (Ox = O3 + NO2). EC, OC, and ECOC were enriched at higher relative humidity. The findings of this study on the mixing state, temporal variation, processing, and evolution of single particles provide new insight into the atmospheric behavior and impacts of urban particles.
CD146(+) cells are essential for kidney vasculature development.
Halt, Kimmo J; Pärssinen, Heikki E; Junttila, Sanna M; Saarela, Ulla; Sims-Lucas, Sunder; Koivunen, Peppi; Myllyharju, Johanna; Quaggin, Susan; Skovorodkin, Ilya N; Vainio, Seppo J
2016-08-01
The kidney vasculature is critical for renal function, but its developmental assembly mechanisms remain poorly understood and models for studying its assembly dynamics are limited. Here, we tested whether the embryonic kidney contains endothelial cells (ECs) that are heterogeneous with respect to VEGFR2/Flk1/KDR, CD31/PECAM, and CD146/MCAM markers. Tie1Cre;R26R(YFP)-based fate mapping with a time-lapse in embryonic kidney organ culture successfully depicted the dynamics of kidney vasculature development and the correlation of the process with the CD31(+) EC network. Depletion of Tie1(+) or CD31(+) ECs from embryonic kidneys, with either Tie1Cre-induced diphtheria toxin susceptibility or cell surface marker-based sorting in a novel dissociation and reaggregation technology, illustrated substantial EC network regeneration. Depletion of the CD146(+) cells abolished this EC regeneration. Fate mapping of green fluorescent protein (GFP)-marked CD146(+)/CD31(-) cells indicated that they became CD31(+) cells, which took part in EC structures with CD31(+) wild-type ECs. EC network development depends on VEGF signaling, and VEGF and erythropoietin are expressed in the embryonic kidney even in the absence of any external hypoxic stimulus. Thus, the ex vivo embryonic kidney culture models adopted here provided novel ways for targeting renal EC development and demonstrated that CD146(+) cells are critical for kidney vasculature development. Copyright © 2016 International Society of Nephrology. All rights reserved.
Electrostatic complementarity at protein/protein interfaces.
McCoy, A J; Chandana Epa, V; Colman, P M
1997-05-02
Calculation of the electrostatic potential of protein-protein complexes has led to the general assertion that protein-protein interfaces display "charge complementarity" and "electrostatic complementarity". In this study, quantitative measures for these two terms are developed and used to investigate protein-protein interfaces in a rigorous manner. Charge complementarity (CC) was defined using the correlation of charges on nearest neighbour atoms at the interface. All 12 protein-protein interfaces studied had insignificantly small CC values. Therefore, the term charge complementarity is not appropriate for the description of protein-protein interfaces when used in the sense measured by CC. Electrostatic complementarity (EC) was defined using the correlation of surface electrostatic potential at protein-protein interfaces. All twelve protein-protein interfaces studied had significant EC values, and thus the assertion that protein-protein association involves surfaces with complementary electrostatic potential was substantially confirmed. The term electrostatic complementarity can therefore be used to describe protein-protein interfaces when used in the sense measured by EC. Taken together, the results for CC and EC demonstrate the relevance of the long-range effects of charges, as described by the electrostatic potential at the binding interface. The EC value did not partition the complexes by type such as antigen-antibody and proteinase-inhibitor, as measures of the geometrical complementarity at protein-protein interfaces have done. The EC value was also not directly related to the number of salt bridges in the interface, and neutralisation of these salt bridges showed that other charges also contributed significantly to electrostatic complementarity and electrostatic interactions between the proteins. Electrostatic complementarity as defined by EC was extended to investigate the electrostatic similarity at the surface of influenza virus neuraminidase where the epitopes of two monoclonal antibodies, NC10 and NC41, overlap. Although NC10 and NC41 both have quite high values of EC for their interaction with neuraminidase, the similarity in electrostatic potential generated by the two on the overlapping region of the epitopes is insignificant. Thus, it is possible for two antibodies to recognise the electrostatic surface of a protein in dissimilar ways.
NASA Astrophysics Data System (ADS)
Yang, X. I. A.; Marusic, I.; Meneveau, C.
2016-06-01
Townsend [Townsend, The Structure of Turbulent Shear Flow (Cambridge University Press, Cambridge, UK, 1976)] hypothesized that the logarithmic region in high-Reynolds-number wall-bounded flows consists of space-filling, self-similar attached eddies. Invoking this hypothesis, we express streamwise velocity fluctuations in the inertial layer in high-Reynolds-number wall-bounded flows as a hierarchical random additive process (HRAP): uz+=∑i=1Nzai . Here u is the streamwise velocity fluctuation, + indicates normalization in wall units, z is the wall normal distance, and ai's are independently, identically distributed random additives, each of which is associated with an attached eddy in the wall-attached hierarchy. The number of random additives is Nz˜ln(δ /z ) where δ is the boundary layer thickness and ln is natural log. Due to its simplified structure, such a process leads to predictions of the scaling behaviors for various turbulence statistics in the logarithmic layer. Besides reproducing known logarithmic scaling of moments, structure functions, and correlation function [" close="]3/2
Liu, Rebecca; Manes, Thomas D.; Qin, Lingfeng; Tietjen, Gregory T.; Broecker, Verena; Fang, Caodi; Xie, Catherine; Chen, Ping-Min; Kirkiles-Smith, Nancy C.; Jane-Wit, Dan; Pober, Jordan S.
2018-01-01
Early acute rejection of human allografts is mediated by circulating alloreactive host effector memory T cells (TEM). TEM infiltration typically occurs across graft postcapillary venules and involves sequential interactions with graft-derived endothelial cells (ECs) and pericytes (PCs). While the role of ECs in allograft rejection has been extensively studied, contributions of PCs to this process are largely unknown. This study aimed to characterize the effects and mechanisms of interactions between human PCs and allogeneic TEM. We report that unstimulated PCs, like ECs, can directly present alloantigen to TEM, but while IFN-γ–activated ECs (γ-ECs) show increased ability to stimulate alloreactive T cells, IFN-γ–activated PCs (γ-PCs) instead suppress TEM proliferation but not cytokine production or signaling. RNA sequencing analysis of PCs, γ-PCs, ECs, and γ-ECs reveal induction of indoleamine 2,3-dioxygenase 1 (IDO1) in γ-PCs to significantly higher levels than in γ-ECs that correlates with tryptophan depletion in vitro. Consistently, shRNA knockdown of IDO1 markedly reduces γ-PC–mediated immunoregulatory effects. Furthermore, human PCs express IDO1 in a skin allograft rejection humanized mouse model and in human renal allografts with acute T cell–mediated rejection. We conclude that immunosuppressive properties of human PCs are not intrinsic but instead result from IFN-γ–induced IDO1-mediated tryptophan depletion. PMID:29515027
Brigida, Anna Lisa; Schultz, Stephen; Cascone, Mariana; Antonucci, Nicola; Siniscalco, Dario
2017-01-01
Several studies highlight a key involvement of endocannabinoid (EC) system in autism pathophysiology. The EC system is a complex network of lipid signaling pathways comprised of arachidonic acid-derived compounds (anandamide, AEA) and 2-arachidonoyl glycerol (2-AG), their G-protein-coupled receptors (cannabinoid receptors CB1 and CB2) and the associated enzymes. In addition to autism, the EC system is also involved in several other psychiatric disorders (i.e., anxiety, major depression, bipolar disorder and schizophrenia). This system is a key regulator of metabolic and cellular pathways involved in autism, such as food intake, energy metabolism and immune system control. Early studies in autism animal models have demonstrated alterations in the brain’s EC system. Autism is also characterized by immune system dysregulation. This alteration includes differential monocyte and macrophage responses, and abnormal cytokine and T cell levels. EC system dysfunction in a monocyte and macrophagic cellular model of autism has been demonstrated by showing that the mRNA and protein for CB2 receptor and EC enzymes were significantly dysregulated, further indicating the involvement of the EC system in autism-associated immunological disruptions. Taken together, these new findings offer a novel perspective in autism research and indicate that the EC system could represent a novel target option for autism pharmacotherapy. PMID:28671614
Extracellular space preservation aids the connectomic analysis of neural circuits
Pallotto, Marta; Watkins, Paul V; Fubara, Boma; Singer, Joshua H; Briggman, Kevin L
2015-01-01
Dense connectomic mapping of neuronal circuits is limited by the time and effort required to analyze 3D electron microscopy (EM) datasets. Algorithms designed to automate image segmentation suffer from substantial error rates and require significant manual error correction. Any improvement in segmentation error rates would therefore directly reduce the time required to analyze 3D EM data. We explored preserving extracellular space (ECS) during chemical tissue fixation to improve the ability to segment neurites and to identify synaptic contacts. ECS preserved tissue is easier to segment using machine learning algorithms, leading to significantly reduced error rates. In addition, we observed that electrical synapses are readily identified in ECS preserved tissue. Finally, we determined that antibodies penetrate deep into ECS preserved tissue with only minimal permeabilization, thereby enabling correlated light microscopy (LM) and EM studies. We conclude that preservation of ECS benefits multiple aspects of the connectomic analysis of neural circuits. DOI: http://dx.doi.org/10.7554/eLife.08206.001 PMID:26650352
Recent Trends of Summer Convective and Stratiform Precipitation in Mid-Eastern China
Fu, Yunfei; Chen, Fengjiao; Liu, Guosheng; Yang, Yuanjian; Yuan, Renmin; Li, Rui; Liu, Qi; Wang, Yu; Zhong, Lei; Sun, Liang
2016-01-01
Many studies have reported on the trends of precipitation in Mid-Eastern China (EC). However, the trends of convective and stratiform precipitation are still unknown. Here, we examine the trends of summer convective and stratiform precipitation in EC from 2002 to 2012 on the basis of the TRMM observations. Results revealed that the rain frequency (RF) for both convective and stratiform precipitation increased in majority regions of Southern EC (SEC), but decreased in Northwest part of Northern EC (NEC). The decreasing rate of RF for stratiform precipitation in NEC is twice as much as that for convective precipitation, while the increase of convective precipitation in SEC is more evident than stratiform precipitation. The rain rate (RR) exhibited a decreasing trend in most portions of EC for both convective and stratiform precipitation. In SEC, neither PW nor WVT has good ability in explaining the precipitation variability. However, in NEC, PW is closely correlated to convective RF and WVT is more closely related to stratiform RF. PMID:27604846
Nicoludis, John M; Lau, Sze-Yi; Schärfe, Charlotta P I; Marks, Debora S; Weihofen, Wilhelm A; Gaudet, Rachelle
2015-11-03
Clustered protocadherin (Pcdh) proteins mediate dendritic self-avoidance in neurons via specific homophilic interactions in their extracellular cadherin (EC) domains. We determined crystal structures of EC1-EC3, containing the homophilic specificity-determining region, of two mouse clustered Pcdh isoforms (PcdhγA1 and PcdhγC3) to investigate the nature of the homophilic interaction. Within the crystal lattices, we observe antiparallel interfaces consistent with a role in trans cell-cell contact. Antiparallel dimerization is supported by evolutionary correlations. Two interfaces, located primarily on EC2-EC3, involve distinctive clustered Pcdh structure and sequence motifs, lack predicted glycosylation sites, and contain residues highly conserved in orthologs but not paralogs, pointing toward their biological significance as homophilic interaction interfaces. These two interfaces are similar yet distinct, reflecting a possible difference in interaction architecture between clustered Pcdh subfamilies. These structures initiate a molecular understanding of clustered Pcdh assemblies that are required to produce functional neuronal networks. Copyright © 2015 Elsevier Ltd. All rights reserved.
NASA Astrophysics Data System (ADS)
Ma, Y.; Liu, S.
2017-12-01
Accurate estimation of surface evapotranspiration (ET) with high quality is one of the biggest obstacles for routine applications of remote sensing in eco-hydrological studies and water resource management at basin scale. However, many aspects urgently need to deeply research, such as the applicability of the ET models, the parameterization schemes optimization at the regional scale, the temporal upscaling, the selecting and developing of the spatiotemporal data fusion method and ground-based validation over heterogeneous land surfaces. This project is based on the theoretically robust surface energy balance system (SEBS) model, which the model mechanism need further investigation, including the applicability and the influencing factors, such as local environment, and heterogeneity of the landscape, for improving estimation accuracy. Due to technical and budget limitations, so far, optical remote sensing data is missing due to frequent cloud contamination and other poor atmospheric conditions in Southwest China. Here, a multi-source remote sensing data fusion method (ESTARFM: Enhanced Spatial and Temporal Adaptive Reflectance Fusion Model) method will be proposed through blending multi-source remote sensing data acquired by optical, and passive microwave remote sensors on board polar satellite platforms. The accurate "all-weather" ET estimation will be carried out for daily ET of the River Source Region in Southwest China, and then the remotely sensed ET results are overlapped with the footprint-weighted images of EC (eddy correlation) for ground-based validation.
Binding site and affinity prediction of general anesthetics to protein targets using docking.
Liu, Renyu; Perez-Aguilar, Jose Manuel; Liang, David; Saven, Jeffery G
2012-05-01
The protein targets for general anesthetics remain unclear. A tool to predict anesthetic binding for potential binding targets is needed. In this study, we explored whether a computational method, AutoDock, could serve as such a tool. High-resolution crystal data of water-soluble proteins (cytochrome C, apoferritin, and human serum albumin), and a membrane protein (a pentameric ligand-gated ion channel from Gloeobacter violaceus [GLIC]) were used. Isothermal titration calorimetry (ITC) experiments were performed to determine anesthetic affinity in solution conditions for apoferritin. Docking calculations were performed using DockingServer with the Lamarckian genetic algorithm and the Solis and Wets local search method (http://www.dockingserver.com/web). Twenty general anesthetics were docked into apoferritin. The predicted binding constants were compared with those obtained from ITC experiments for potential correlations. In the case of apoferritin, details of the binding site and their interactions were compared with recent cocrystallization data. Docking calculations for 6 general anesthetics currently used in clinical settings (isoflurane, sevoflurane, desflurane, halothane, propofol, and etomidate) with known 50% effective concentration (EC(50)) values were also performed in all tested proteins. The binding constants derived from docking experiments were compared with known EC(50) values and octanol/water partition coefficients for the 6 general anesthetics. All 20 general anesthetics docked unambiguously into the anesthetic binding site identified in the crystal structure of apoferritin. The binding constants for 20 anesthetics obtained from the docking calculations correlate significantly with those obtained from ITC experiments (P = 0.04). In the case of GLIC, the identified anesthetic binding sites in the crystal structure are among the docking predicted binding sites, but not the top ranked site. Docking calculations suggest a most probable binding site located in the extracellular domain of GLIC. The predicted affinities correlated significantly with the known EC(50) values for the 6 frequently used anesthetics in GLIC for the site identified in the experimental crystal data (P = 0.006). However, predicted affinities in apoferritin, human serum albumin, and cytochrome C did not correlate with these 6 anesthetics' known experimental EC(50) values. A weak correlation between the predicted affinities and the octanol/water partition coefficients was observed for the sites in GLIC. We demonstrated that anesthetic binding sites and relative affinities can be predicted using docking calculations in an automatic docking server (AutoDock) for both water-soluble and membrane proteins. Correlation of predicted affinity and EC(50) for 6 frequently used general anesthetics was only observed in GLIC, a member of a protein family relevant to anesthetic mechanism.
Binding Site and Affinity Prediction of General Anesthetics to Protein Targets Using Docking
Liu, Renyu; Perez-Aguilar, Jose Manuel; Liang, David; Saven, Jeffery G.
2012-01-01
Background The protein targets for general anesthetics remain unclear. A tool to predict anesthetic binding for potential binding targets is needed. In this study, we explore whether a computational method, AutoDock, could serve as such a tool. Methods High-resolution crystal data of water soluble proteins (cytochrome C, apoferritin and human serum albumin), and a membrane protein (a pentameric ligand-gated ion channel from Gloeobacter violaceus, GLIC) were used. Isothermal titration calorimetry (ITC) experiments were performed to determine anesthetic affinity in solution conditions for apoferritin. Docking calculations were performed using DockingServer with the Lamarckian genetic algorithm and the Solis and Wets local search method (https://www.dockingserver.com/web). Twenty general anesthetics were docked into apoferritin. The predicted binding constants are compared with those obtained from ITC experiments for potential correlations. In the case of apoferritin, details of the binding site and their interactions were compared with recent co-crystallization data. Docking calculations for six general anesthetics currently used in clinical settings (isoflurane, sevoflurane, desflurane, halothane, propofol, and etomidate) with known EC50 were also performed in all tested proteins. The binding constants derived from docking experiments were compared with known EC50s and octanol/water partition coefficients for the six general anesthetics. Results All 20 general anesthetics docked unambiguously into the anesthetic binding site identified in the crystal structure of apoferritin. The binding constants for 20 anesthetics obtained from the docking calculations correlate significantly with those obtained from ITC experiments (p=0.04). In the case of GLIC, the identified anesthetic binding sites in the crystal structure are among the docking predicted binding sites, but not the top ranked site. Docking calculations suggest a most probable binding site located in the extracellular domain of GLIC. The predicted affinities correlated significantly with the known EC50s for the six commonly used anesthetics in GLIC for the site identified in the experimental crystal data (p=0.006). However, predicted affinities in apoferritin, human serum albumin, and cytochrome C did not correlate with these six anesthetics’ known experimental EC50s. A weak correlation between the predicted affinities and the octanol/water partition coefficients was observed for the sites in GLIC. Conclusion We demonstrated that anesthetic binding sites and relative affinities can be predicted using docking calculations in an automatic docking server (Autodock) for both water soluble and membrane proteins. Correlation of predicted affinity and EC50 for six commonly used general anesthetics was only observed in GLIC, a member of a protein family relevant to anesthetic mechanism. PMID:22392968
NASA Astrophysics Data System (ADS)
Sargent, S.; Somers, J. M.
2015-12-01
Trace-gas eddy covariance flux measurement can be made with open-path or closed-path analyzers. Traditional closed-path trace-gas analyzers use multipass absorption cells that behave as mixing volumes, requiring high sample flow rates to achieve useful frequency response. The high sample flow rate and the need to keep the multipass cell extremely clean dictates the use of a fine-pore filter that may clog quickly. A large-capacity filter cannot be used because it would degrade the EC system frequency response. The high flow rate also requires a powerful vacuum pump, which will typically consume on the order of 1000 W. The analyzer must measure water vapor for spectroscopic and dilution corrections. Open-path analyzers are available for methane, but not for nitrous oxide. The currently available methane analyzers have low power consumption, but are very large. Their large size degrades frequency response and disturbs the air flow near the sonic anemometer. They require significant maintenance to keep the exposed multipass optical surfaces clean. Water vapor measurements for dilution and spectroscopic corrections require a separate water vapor analyzer. A new closed-path eddy covariance system for measuring nitrous oxide or methane fluxes provides an elegant solution. The analyzer (TGA200A, Campbell Scientific, Inc.) uses a thermoelectrically-cooled interband cascade laser. Its small sample-cell volume and unique sample-cell configuration (200 ml, 1.5 m single pass) provide excellent frequency response with a low-power scroll pump (240 W). A new single-tube Nafion® dryer removes most of the water vapor, and attenuates fluctuations in the residual water vapor. Finally, a vortex intake assembly eliminates the need for an intake filter without adding volume that would degrade system frequency response. Laboratory testing shows the system attenuates the water vapor dilution term by more than 99% and achieves a half-power band width of 3.5 Hz.
NASA Astrophysics Data System (ADS)
Huang, Jinhui Jeanne; Chan, Han
2017-04-01
ABSTRACT Evapotranspiration (ET) has long been regarded as a very important component in energy and mass exchange between hydrosphere, atmosphere and biosphere. It is estimated that about 70% annual precipitation goes back to atmosphere through the process of ET, ET thus plays a significant role in modeling regional and global climate and assessing stresses on natural and agricultural ecosystems. The variation of ET is affected by many processes including hydrological, metrological as well as biological processes. Water used in Agriculture Sector is normally accounted for about 70% of total water consumption. ET may also be enhanced by agriculture practices as it is the key component of water consumption in agriculture practices. A two-year continuous in-situ ET measurement (in half minute time scale) by eddy covariance method (using EC-QCL analyzer and three-dimensional ultrasonic anemometer) was conducted in a large vegetable farmland in the suburb of Yueyang City, Hunan Province. EddyPro software was employed to calculate the actual evapotranspiration, water vapor flux, latent heat flux (LE) and analysis the trend of actual evapotranspiration in different time scales. A RZWQM2 (Root Zone Water Quality Model) model was also developed based on the local metrological data and agriculture practices including planting, harvesting, irrigation practices and fertilization etc., The field observations including in-situ ET measurement are used to calibrate the RZWQM2 model. The calibrated model was further used to study the effects of various agriculture activates on ET. The study shows that the crop density has the greatest effects on the variation of plant transpiration following by irrigation and fertilization. This study provides some scientific basis for the optimization and improvement of agricultural activities in the future. Key words: ET; Agricultural Practices; Eddy Covariance Method; RZWQM2 model
Does Evapotranspiration Increase When Forests are converted to Grasslands?
NASA Astrophysics Data System (ADS)
Varcoe, Robert; Sterling, Shannon
2017-04-01
The conversion of forests to grasslands (FGC) is a widespread land cover change (LCC) and is also among the most commonly studied changes with respect to its impact on ET; such research employs a variety of experimental approaches, including, paired catchment (PC), Budyko and land surface models (LSM), and measurement methods, including the catchment water balance (CWB), eddy covariance (EC) and remote sensing (RS). Until recently, there has been consensus in the scientific literature that rates of ET decrease when a forest is converted to grassland; however, this consensus has recently come into question. Williams (2012) applied the Budyko framework to a global network of eddy covariance measurements with the results that grasslands have a 9% greater evaporative index than forests. In addition, HadGEM2, a recent Hadley Centre LSM, produced increased ET in the northern Amazon Basin after simulating global scale tropical deforestation (Brovkin et al., 2015). Here we present an analysis of available estimates of how ET rates change with FGC to increase our understanding of the forest - grassland-ET paradigm. We used two datasets to investigate the impacts land cover change on ET. I compiled a dataset of change in ET with land cover change (ΔETLCC) using published experiments that compare forest and grassland ET under conditions controlled for meteorological and landscape influences. Using the ΔETLCC dataset, we show that, in all cases, forest ET is higher than grassland under controlled conditions. Results suggest that the eddy covariance method measures smaller changes in ET when forests are converted to grasslands, though more data are needed for this result to be statistically significant. Finally, GETA2.0, a new global dataset of annual ET, projects that forest ET is greater than grassland, except at high latitudes and areas where orography influences precipitation (P). The data included in this study represent the data available on forest and grassland ET comparison and reveal an important gap in the scientific literature: the lack of data available regarding forest to grassland LCC.
Characteristics of carbonaceous aerosols at a pair of suburban and downtown sites in Nanjing, China
NASA Astrophysics Data System (ADS)
Cui, H.; Zhang, J.; Zhao, Y.
2014-12-01
Carbonaceous species in PM2.5 were measured in three seasons (except winter) in downtown and around a year in suburban in Nanjing. In particular, the OC and EC concentrations were continuously measured with 1-h interval at both sites. The mean concentrations of PM2.5, OC, EC were 85.9 μg/m3, 10.4 μg/m3, 4.2 μg/m3 and 63.4 μg/m3, 8.1 μg/m3, 5.3μg/m3 for downtown and suburban respectively. At the suburban site, compared to the lowest average concentration in spring, the relatively higher concentration of carbonaceous aerosol in summer was caused by biomass-burning activities. Significant increasing peaks of OC (up to 122.9 ug/m3) and EC (up to 35.8 ug/m3) in suburban were recorded in the June 10th night, and it is indicated using back trajectory that the air mass came through nearby agriculture areas. On the other hand, the OC and EC concentrations during the 2nd AYG (Asian Youth Games, Aug 16th - 24th in 2013) compared to that in rest days in August reduced by 21% and 10%, respectively, attributing to the effective control measures on reduction of industrial point sources, temporary control of motor vehicle and fugitive dusts. Rations of OC/EC in suburban were much lower than that in downtown. This might be due to the fact that the sampling point in suburban is quite close (in 400 meters) to a main highway. Both OC and EC concentrations in suburban were higher in nighttime than daytime, except OC in summer, indicating the existence of strong SOC and supported by high OC/EC and O3 at noon. The annual average SOC estimated by EC-tracer methods occupied 34.5% and 36.7% of the total OC for the downtown and suburban areas, respectively. OC/EC correlations in suburban were much weaker than those from downtown areas, which shows suburban areas is much more affected by long-range transport of pollution and/or complex sources including domestic coal combustion, biomass burning, industrial and transportation, especially in three other seasons except winter, which is also supported by poor correlations between carbonaceous species and gaseous pollutants (NO2, SO2, CO) in spring at suburban site.
Intraepithelial lymphocytes in relation to NIH category IV prostatitis in autopsy prostate.
Dikov, Dorian; Bachurska, Svitlana; Staikov, Dimitri; Sarafian, Victoria
2015-07-01
Quantitative analysis of the number, normal and pathologic ratios between lymphocytes and epithelial cells (ECs), and the significance of intraepithelial lymphocytes (IELs) in normal prostatic epithelium, benign prostatic hyperplasia (BPH), and high grade prostatic intraepithelial neoplasia (PIN) in relation to NIH category IV prostatitis (histologic prostatitis: HP) was studied in autopsy prostate. IELs were analysed in 59 autopsy prostates, which was routinely embedded in paraffin and immunohistochemically stained for CD3. An average of 300-500 ECs were counted per case. The number of IELs was calculated as the mean/100 ECs. Category IV prostatitis was evaluated using NIH consensus grading system in terms of anatomical localization and grade. In healthy individuals the mean number of IELs/100 ECs was 0.61 ± 0.34% or ≤1 lymphocyte/100 ECs, which is considered as the normal basal level of prostate IELs. In category IV prostatitis, the mean number of IELs/100 ECs was 8.53 ± 3.25% or 5-11 lymphocytes/100 ECs. The number of IELs in both around and inside inflammation areas correlated to the grade and location of HP (P < 0.0001 and P < 0.0003), the presence of acute glandular inflammation (P < 0.0001), the scattered stromal lymphocytes (P = 0.029), and BPH and PIN associated prostatic inflammation (P < 0.0001). The study presents the first attempt to examine and score the basic quantitative values of prostatic IELs in normal prostate and in relation to category IV prostatitis. The detected normal upper limit of CD3+ IELs is 1 lymphocyte/100 ECs in the normal prostate epithelium. This is considered as an organ specific characteristic of the prostate-associated lymphoid tissue (PALT). Values >5 IELs/100 ECs indicate the presence of category IV prostatitis. The severity of inflammation correlates to the number of IELs. There is an intimate link between the quantity of the IELs, the degree of the severity and the localization of category IV prostatitis. HP is a chronic and dynamic inflammatory process affecting the whole prostate gland. The increased number of IELs suggests the immune or autoimmune character of category IV prostatitis, BPH and inflammatory preneoplastic (PIN) lesions in the prostatic tumor environment. © 2015 Wiley Periodicals, Inc.
Newton vs. Munchhausen in upper-troposphere dynamics
NASA Astrophysics Data System (ADS)
Bergmann, Juan Carlos
2010-05-01
Atmospheric angular momentum (AM) balance depends crucially on the existence and magnitude of the planetary-scale AM transport by 'eddies' in the upper troposphere. Its divergence has to provide the torque, which is necessary to realise the upper-troposphere branch of meridional circulation. (In the boundary layer, the torque is provided by surface-friction.) The torques in neighbouring circulation cells are opposed, so that the AM transport mediates a torque-interaction between the circulation cells. This interaction corresponds to a clear requirement of Newton's Third Law: torques (forces) exist only in interaction with other bodies, and their sum is equal to zero. In Münchhausen's physics, force (and torque) exists without interaction: In a famous tale, Münchhausen saves himself (and his horse!) from drowning in a swamp-hole by pulling himself up at his hair. Münchhausen-physics situations arise in the dynamical analysis of the torque exerted by a single eddy and in analysis of the cause for the AM transport of the single eddy. The local AM transport of the single eddy is defined by the difference in zonal velocity between the pole-ward and equator-ward branches (Δu) multiplied with meridional velocity-magnitude (¦v¦). For the average over many eddies, it transforms to the average product of the deviations of zonal and meridional velocities from their local averages (, eddy-correlation; the complete formulations include the local radius of rotation but it is omitted here for simplicity reasons). This definition is phenomenological but not dynamical. In dynamical analysis it turns out that the torque-related zonal equation of motion of an AM-transporting single eddy can be formulated without torque-interaction with other bodies (torque-free eddy). Newton III implies also the phenomenological torque (transport divergence -δ(¦v¦Δu)/δy) to be zero for this case because there is no partner of torque-interaction. However, the dynamically torque-free single eddy has an unavoidable 'transport' divergence - especially in the turning-region of the meridional motion. Thus, there is a phenomenological 'torque' (non-zero 'transport' divergence) without torque-interaction - a classical Münchhausen situation! The dynamical cause of phenomenological 'AM transport' and associated phenomenological 'torques' of the dynamically torque-free single eddy is 'hidden' in the non-torque-related meridional equation of motion for steady-state: δv-δ t = - u δv-δx - vδv-δ y - f u(x) + Fy(x) = 0 . Strong variation of the meridional pressure-gradient force Fy(x) (no torque!) over the eddy-path (longitude x) produces varying zonal velocities u(x) that are falsely interpreted as 'AM transport' on the phenomenological level (the 'advective' terms are negligible outside the eddy's turning regions). Thus, creation and destruction of phenomenological 'AM transport' (Δu) in a single eddy do not originate from torque-interaction with other bodies - another classical Münchhausen situation! Should the previous analysis be ignored in favour of maintaining the 'established' ideas of upper-troposphere dynamics or should there be an effort to formulate new ideas that are in accordance with Newtonian physics?
NASA Astrophysics Data System (ADS)
McCann-Grosvenor, Kristina; Reimers, Clare E.; Sanders, Rhea D.
2014-08-01
Measurement of in situ O2 consumption and production within permeable sediments, such as those found over the Oregon-Washington inner shelf, has traditionally been done using methods that isolate the sediments from the dynamic influences of currents and wave motions. Modified from atmospheric research, the non-invasive eddy correlation technique can be used to characterize benthic boundary layer dynamics and measure O2 flux across the sediment-water interface without excluding the natural hydrodynamic flow. In 2009, eddy correlation measurements were made in 5 discrete months with varying conditions at a 30 m site off Yaquina Head, Newport, OR. The O2 flux was found to be primarily into the bed (-18±3 mmol m-2 d-1; mean±SE, n=137 15-min bursts) but was sensitive to non-steady state changes in O2 concentrations caused by the differential advection of water masses with variable mean O2 concentrations. Important contributions to O2 eddy fluxes at surface wave frequencies were seen in eddy correlation cospectra and these are interpreted as being indicative of consumption enhanced by advective transport of O2 into the bed. The sediments were deposits of fine sand with permeabilities of 1.3-4.7×10-11 m2 and wave-generated ripples. Sediment pigment and organic carbon concentrations were low (chlorophyll-α: 0.02-0.45 μg g-1, phaeophytin-α: 0.38-1.38 μg g-1 and organic carbon: 0.05-0.39% dry wt in discrete depth intervals from cores collected between March and October), but it was evident that during the summer fresh pigments were trapped in the sand and rapidly mixed over the uppermost 0-13 cm. From these results it is inferred that physical forcing associated largely with waves and currents may accentuate the role of sediment-covered inner shelf habitats as a regional O2 sink compared to the middle shelf. In effect, the action of waves and currents in the benthic boundary layer enables aerobic respiration that counterbalances the oxygenation of the water column by primary production and mixing in the surface layer.
NASA Astrophysics Data System (ADS)
Qiong, Liu; Pan, Delu; Huang, Haiqing; Lu, Jianxin; Zhu, Qiankun
2011-11-01
A cruise was conducted in the East China Sea (ECS) in autumn 2010 to collect Dissolved Organic Carbon (DOC) and Colored Dissolved Organic Matter (CDOM) samples. The distribution of DOC mainly controlled by the hydrography since the relationship between DOC and salinity was significant in both East China Sea. The biological activity had a significant influence on the concentration of DOC with a close correlation between DOC and Chl a. The absorption coefficient of CDOM (a355) decreased with the salinity increasing in the shelf of East China Sea (R2=0.9045). CDOM and DOC were significantly correlated in ECS where DOC distribution was dominated largely by the Changjiang diluted water. Based on the relationship of CDOM and DOC, we estimated the DOC concentration of the surface in ECS from satellite-derived CDOM images. Some deviations induced by the biological effect and related marine DOC accumulations were discussed.
Wu, Pinggu; Zhang, Liqun; Wang, Liyuan; Zhang, Jing; Tan, Ying; Tang, Jun; Ma, Bingjie; Pan, Xiaodong; Jiang, Wei
2014-08-01
We developed a new method, based on alkaline diatomite solid-phase extraction followed by gas chromatography with mass spectrometry, for the simultaneous determination of the toxic contaminants ethyl carbamate (EC) and 4-(5-)methylimidazole (4-MEI) in yellow rice wine and soy sauce. The optimal extraction conditions were defined. With the application of alkaline diatomite solid-phase extraction, damage to the capillary column by organic acids was greatly reduced. With deuterated EC used as the internal standard, the linearity of the calibration curves for EC and 4-MEI was good with correlation coefficient above 0.99. In a spiked experiment with EC and 4-MEI in yellow rice wine and soy sauce, recovery of the added EC was 80.5-102.5% and that of 4-MEI was 78.3-92.8%. The limit of quantification and limit of detection for EC were 6.0 and 2.0 μg/kg, respectively, and for 4-MEI were 15.0 and 5.0 μg/kg, respectively. The validation results demonstrate that the method is fast, simple, and selective, and therefore is suitable for simultaneously determining the presence of EC and 4-MEI in fermented food. © 2014 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.
Haack, S.K.; Fogarty, L.R.; Wright, C.
2003-01-01
This study quantified Escherichia coli(EC) and enterococci (ENT) in beach waters and dominant source materials, correlated these with ambient conditions, and determined selected EC genotypes and ENT phenotypes. Bathing-water ENT criteria were exceeded more frequently than EC criteria, providing conflicting interpretations of water quality. Dominant sources of EC and ENT were bird feces (108/d/bird), storm drains (107/d), and river water (1011/d); beach sands, shallow groundwater and detritus were additional sources. Beach-water EC genotypes and ENT phenotypes formed clusters with those from all source types, reflecting diffuse inputs. Some ENT isolates had phenotypes similar to those of human pathogens and/or exhibited high-level resistance to human-use antibiotics. EC and ENT concentrations were influenced by collection time and wind direction. There was a 48-72-h lag between rainfall and elevated EC concentrations at three southern shoreline beaches, but no such lag at western and eastern shoreline beaches, reflecting the influence of beach orientation with respect to cyclic (3-5 d) summer weather patterns. In addition to local contamination sources and processes, conceptual or predictive models of Great Lakes beach water quality should consider regional weather patterns, lake hydrodynamics, and the influence of monitoring method variables (time of day, frequency).
Ding, ZuFeng; Fan, YuBo; Deng, XiaoYan
2009-11-01
Using different endothelial/smooth muscle cell co-culture modes to simulate the intimal structure of blood vessels, the water filtration rate and the infiltration/accumulation of LDL of the cultured cell layers were studied. The three cell culture modes of the study were: (i) The endothelial cell monolayer (EC/Phi); (ii) endothelial cells directly co-cultured on the smooth muscle cell monolayer (EC-SMC); (iii) endothelial cells and smooth muscle cells cultured on different sides of a Millicell-CM membrane (EC/SMC). It was found that under the same condition, the water filtration rate was the lowest for the EC/SMC mode and the highest for the EC/Phi mode, while the infiltration/accumulation of DiI-LDLs was the lowest in the EC/Phi mode and the highest in the EC-SMC mode. It was also found that DiI-LDL infiltration/accumulation in the cultured cell layers increased with the increasing water filtration rate. The results from the in vitro model study therefore suggest that the infiltration/accumulation of the lipids within the arterial wall is positively correlated with concentration polarization of atherogenic lipids, and the integrity of the endothelium plays an important role in the penetration and accumulation of atherogenic lipids in blood vessel walls.
NASA Astrophysics Data System (ADS)
Mbengue, Saliou; Fusek, Michal; Schwarz, Jaroslav; Vodička, Petr; Šmejkalová, Adéla Holubová; Holoubek, Ivan
2018-06-01
Elemental carbon (EC) and organic carbon (OC) in fine atmospheric aerosols (PM2.5: aerodynamic diameter smaller than 2.5 μm) have been measured with a semi-automatic instrument during a 4-year survey at the National Atmospheric Observatory Košetice (NAOK), Czech Republic. Ground based measurements were performed from March 2013 to December 2016 with a field Semi-Continuous OCEC Aerosol Analyzer (Sunset Laboratory Inc., USA). The variation of EC and OC concentrations and the OC/EC ratio was characterized for different seasons and days of the week. During our survey, higher concentrations of EC and OC were observed in winter (0.83 ± 0.67 and 3.33 ± 2.28 μg m-3, respectively), and lower concentrations were recorded in summer (0.34 ± 0.18 and 2.30 ± 1.15 μg m-3, respectively). Inversely, the OC/EC ratio with mean value (5.1 ± 2.6) characteristic to rural background area was higher in summer (7.33 ± 3.23) in comparison to the other seasons. Since the data contain values below detection and quantification limits of the measuring device (i.e., censored values), statistical methods for censored data have been used in order to compare mean EC and OC concentrations between various seasons. It was found out that there is a significant difference between summer and the other seasons with the exception of mean OC concentrations at noon. In most cases, there was also a significant difference between winter and the other seasons. Moreover, it was found out that when dealing with OC concentrations, it is possible to replace censored values by a constant and still obtain reasonable results. In case of EC concentrations, the method based on censored distributions should be preferred when the sample size is small and the proportion of censored values is high. The diurnal variation of EC and OC is less pronounced in summer. During working days, the EC diurnal pattern displays a morning (between 6:00 and 10:00) and an afternoon/evening (between 18:00 and 22:00) peaks, while for OC, only the afternoon/evening peak is observed. These seasonal, diurnal and weekly variations of EC and OC concentrations and OC/EC ratio are probably related to variability in terms of emission sources (residential heating, traffic), transport characteristic and meteorological conditions. A weaker correlation between EC and OC in summer (r = 0.56) suggests additional sources and/or transport processes during other seasons. The elevated OC/EC ratio, the higher correlation between OC and O3, and the temperature and solar radiation during summer confirmed an increasing contribution of OC from secondary organic carbon (SOC) estimated as at least 59 ± 11% of total carbon in the PM2.5 using the EC tracer method. Backward trajectories of air masses arriving at 100 m AGL calculated in winter and summer show that higher pollution episodes of EC and OC are predominantly associated with continental air masses confined over Central Europe (about 79%), while lower EC and OC levels are mainly associated with episodes of long-range transport of marine air masses. Interestingly, the results reveal that in winter pollutants emitted during workdays could be accumulated above the region and influence the rural background air quality during some prolonged time of the weekend, especially on Saturday.
Gulyuz, K; Bollen, G; Brodeur, M; Bryce, R A; Cooper, K; Eibach, M; Izzo, C; Kwan, E; Manukyan, K; Morrissey, D J; Naviliat-Cuncic, O; Redshaw, M; Ringle, R; Sandler, R; Schwarz, S; Sumithrarachchi, C S; Valverde, A A; Villari, A C C
2016-01-08
We report the determination of the Q(EC) value of the mirror transition of (11)C by measuring the atomic masses of (11)C and (11)B using Penning trap mass spectrometry. More than an order of magnitude improvement in precision is achieved as compared to the 2012 Atomic Mass Evaluation (Ame2012) [Chin. Phys. C 36, 1603 (2012)]. This leads to a factor of 3 improvement in the calculated Ft value. Using the new value, Q(EC)=1981.690(61) keV, the uncertainty on Ft is no longer dominated by the uncertainty on the Q(EC) value. Based on this measurement, we provide an updated estimate of the Gamow-Teller to Fermi mixing ratio and standard model values of the correlation coefficients.
Evaporation from Lake Mead, Nevada and Arizona, March 2010 through February 2012
Moreo, Michael T.; Swancar, Amy
2013-01-01
Evaporation from Lake Mead was measured using the eddy-covariance method for the 2-year period starting March 2010 and ending February 2012. When corrected for energy imbalances, annual eddy-covariance evaporation was 2,074 and 1,881 millimeters (81.65 and 74.07 inches), within the range of previous estimates. There was a 9-percent decrease in the evaporation rate and a 10-percent increase in the lake surface area during the second year of the study compared to the first. These offsetting factors resulted in a nearly identical 720 million cubic meters (584,000 acre feet) evaporation volume for both years. Monthly evaporation rates were best correlated with wind speed, vapor pressure difference, and atmospheric stability. Differences between individual monthly evaporation and mean monthly evaporation were as much as 20 percent. Net radiation provided most of the energy available for evaporative processes; however, advected heat from the Colorado River was an important energy source during the second year of the study. Peak evaporation lagged peak net radiation by 2 months because a larger proportion of the net radiation that reaches the lake goes to heating up the water column during the spring and summer months. As most of this stored energy is released, higher evaporation rates are sustained during fall months even though net radiation declines. The release of stored heat also fueled nighttime evaporation, which accounted for 37 percent of total evaporation. The annual energy-balance ratio was 0.90 on average and varied only 0.01 between the 2 years, thus implying that 90 percent of estimated available energy was accounted for by turbulent energy measured using the eddy-covariance method. More than 90 percent of the turbulent-flux source area represented the open-water surface, and 94 percent of 30-minute turbulent-flux measurements originated from wind directions where the fetch ranged from 2,000 to 16,000 meters. Evaporation uncertainties were estimated to be 5 to 7 percent. A secondary evaporation method, the Bowen ratio energy budget method, also was employed to measure evaporation from Lake Mead primarily as a validation of eddy-covariance evaporation measurements at annual timescales. There was good agreement between annual corrected eddy-covariance and Bowen ratio energy budget evaporation estimates, providing strong validation of these two largely independent methods. Annual Bowen ratio energy budget evaporation was 6 and 8 percent greater than eddy-covariance evaporation for the 2 study years, and both methods indicated there was a similar decrease in evaporation from the first to the second year. Both methods produced negative sensible heat fluxes during the same months, and there was a strong correlation between monthly Bowen ratios (R2 = 0.94). The correlation between monthly evaporation (R2 = 0.65), however, was not as strong. Monthly differences in evaporation were attributed primarily to heat storage estimate uncertainty.
Eddy covariance measurements of sea spray particles over the Atlantic Ocean
NASA Astrophysics Data System (ADS)
Norris, S. J.; Brooks, I. M.; de Leeuw, G.; Smith, M. H.; Moerman, M.; Lingard, J. J. N.
2008-02-01
Most estimates of sea spray aerosol source functions have used indirect means to infer the rate of production as a function of wind speed. Only recently has the technology become available to make high frequency measurements of aerosol spectra suitable for direct eddy correlation determination of the sea spray particle flux. This was accomplished in this study by combining a newly developed fast aerosol particle counter with an ultrasonic anemometer which allowed for eddy covariance measurements of size-segregated particle fluxes. The aerosol instrument is the Compact Lightweight Aerosol Spectrometer Probe (CLASP) - capable of measuring 8-channel size spectra for mean radii between 0.15 and 3.5 µm at 10 Hz. The first successful measurements were made during the Waves, Air Sea Fluxes, Aerosol and Bubbles (WASFAB) field campaign in October 2005 in Duck (NC, USA). The method and initial results are presented and comparisons are made with recent sea spray source functions from the literature.
Integrated and spectral energetics of the GLAS general circulation model
NASA Technical Reports Server (NTRS)
Tenenbaum, J.
1982-01-01
Integrated and spectral error energetics of the GLAS General circulation model are compared with observations for periods in January 1975, 1976, and 1977. For two cases the model shows significant skill in predicting integrated energetics quantities out to two weeks, and for all three cases, the integrated monthly mean energetics show qualitative improvements over previous versions of the model in eddy kinetic energy and barotropic conversions. Fundamental difficulties remain with leakage of energy to the stratospheric level, particularly above strong initial jet streams associated in part with regions of steep terrain. The spectral error growth study represents the first comparison of general circulation model spectral energetics predictions with the corresponding observational spectra on a day by day basis. The major conclusion is that eddy kinetics energy can be correct while significant errors occur in the kinetic energy of wavenumber 3. Both the model and observations show evidence of single wavenumber dominance in eddy kinetic energy and the correlation of spectral kinetics and potential energy.
Mishra, G K; Kumar, Abhay; Prakash, O; Biswal, R; Dixit, S K; Nakhe, S V
2015-04-10
This paper presents computational and experimental studies on wavelength/frequency fluctuation characteristics of a high pulse repetition rate (18 kHz) dye laser pumped by a frequency-doubled Nd:YAG laser (532 nm). The temperature gradient in the dye solution is found to be responsible for wavelength fluctuations of the dye laser at low flow rates (2800
CO2 and CH4 exchange by Phragmites australis under different climates
NASA Astrophysics Data System (ADS)
Serrano Ortiz, Penélope; Chojnickic, Bogdan H.; Sánchez-Cañete, Enrique P.; Kowalska, Natalia; López-Ballesteros, Ana; Fernández, Néstor; Urbaniak, Marek; Olejnik, Janusz; Kowalski, Andrew S.
2015-04-01
The key role of wetlands regarding global warming is the resulting balance between net CO2 assimilation, via photosynthesis, and CO2 and CH4 emissions, given the potential to release stored carbon, because of the high temperature sensitivity of heterotrophic soil respiration and anoxic conditions. However, it is still unknown whether wetlands will convert from long-term carbon sinks to sources as a result of climate change and other anthropogenic effects such as land use changes. Phragmites australis is one of the most common species found in wetlands and is considered the most globally widespread and productive plant species in this type of ecosystem. In this context, the main objective of this study is to analyse the GHG exchange (CO2 and CH4) of two wetlands with Phragmites australis as the dominant species under different climates using the eddy covariance (EC) technique. The first site, Padul, is located in southern Spain, with a sub-humid warm climate, characterised by a mean annual temperature of 16°C and annual precipitation of ca. 470 mm, with a very dry summer. The second site, Rzecin is located in Poland with a mean annual temperature of 8°C, and annual precipitation around 600mm with no dry season. The Padul EC station is equipped with two infrared gas analysers to measure CO2 and CH4 fluxes (LI-7200 and LI-7700 respectively) while the Rzecin EC station has the same CH4 sensor as Padul, but also a sensor measuring both GHG fluxes (DLT-100 Fast Methane Analyser, Los Gatos). In this study, we present: i) the results of a CH4 analyser inter-comparison campaign (LI-7700 vs. Los Gatos), ii) a comparative analysis of the functional behaviour of respiration and photosynthesis in both sites testing relationships between CO2 fluxes measured with the EC technique and meteorological variables such as temperature and direct or diffuse radiation and iii) the CH4 dynamicsat both sites by identifying, when possible, annual, seasonal and diurnal patterns.
Kim, Jeong Myeong; Roh, An-Sung; Choi, Seung-Chul; Kim, Eun-Jeong; Choi, Moon-Tae; Ahn, Byung-Koo; Kim, Sun-Kuk; Lee, Young-Han; Joa, Jae-Ho; Kang, Seong-Soo; Lee, Shin Ae; Ahn, Jae-Hyung; Song, Jaekyeong; Weon, Hang-Yeon
2016-12-01
Soil microorganisms play an essential role in soil ecosystem processes such as organic matter decomposition, nutrient cycling, and plant nutrient availability. The land use for greenhouse cultivation has been increasing continuously, which involves an intensive input of agricultural materials to enhance productivity; however, relatively little is known about bacterial communities in greenhouse soils. To assess the effects of environmental factors on the soil bacterial diversity and community composition, a total of 187 greenhouse soil samples collected across Korea were subjected to bacterial 16S rRNA gene pyrosequencing analysis. A total of 11,865 operational taxonomic units at a 97% similarity cutoff level were detected from 847,560 sequences. Among nine soil factors evaluated; pH, electrical conductivity (EC), exchangeable cations (Ca 2+ , Mg 2+ , Na + , and K + ), available P 2 O 5 , organic matter, and NO 3 -N, soil pH was most strongly correlated with bacterial richness (polynomial regression, pH: R 2 = 0.1683, P < 0.001) and diversity (pH: R 2 = 0.1765, P < 0.001). Community dissimilarities (Bray-Curtis distance) were positively correlated with Euclidean distance for pH and EC (Mantel test, pH: r = 0.2672, P < 0.001; EC: r = 0.1473, P < 0.001). Among dominant phyla (> 1%), the relative abundances of Proteobacteria, Gemmatimonadetes, Acidobacteria, Bacteroidetes, Chloroflexi, and Planctomycetes were also more strongly correlated with pH and EC values, compared with other soil cation contents, such as Ca 2+ , Mg 2+ , Na + , and K + . Our results suggest that, despite the heterogeneity of various environmental variables, the bacterial communities of the intensively cultivated greenhouse soils were particularly influenced by soil pH and EC. These findings therefore shed light on the soil microbial ecology of greenhouse cultivation, which should be helpful for devising effective management strategies to enhance soil microbial diversity and improving crop productivity.
Zientek, Franziska; Winter, Karsten; Müller, Astrid; Rullmann, Michael; Luthardt, Julia; Becker, Georg-Alexander; Bresch, Anke; Patt, Marianne; Sabri, Osama; Hilbert, Anja; Hesse, Swen
2016-10-01
There is evidence that temperamental factors are associated with obesity; however, the biological mechanism of such association remains elusive. We aimed to investigate a possible association between serotonin transmission and regulative temperament in obese and non-obese individuals by using positron emission tomography (PET) imaging of serotonin transporters (SERT) and the Adult Temperament Questionnaire. Twenty-nine obese individuals with body mass index (BMI) ≥ 35 kg/m 2 and 13 non-obese controls (BMI < 30 kg/m 2 ) underwent PET with [ 11 C]-labeled DASB (highly selective for SERT) and self-completed the Effortful Control (EC) scale of the Adult Temperament Questionnaire-Short Form (ATQ). With the help of this questionnaire, we aimed to assess the capacity of self-regulation. Overall, for obese and non-obese individuals together, VOI-based (volume of interest) analysis showed significant negative correlations between SERT BP ND and ATQ-EC AC (Activation Control) subscale in several brain regions (all r ≤ -0.47). Obese and non-obese individuals separated showed equally strong positive, but non-significant correlations. The analysis did not reveal any significant correlations of SERT availability and ATQ-EC IC (Inhibitory Control) or ATQ-EC AtC (Attentional Control) subscale within and between the two groups. The results indicate that regulative temperament - particularly the capacity to mitigate negatively toned impulses and to resist inappropriate avoidance behavior - might be associated with the prefrontal serotonergic system. © 2016 Federation of European Neuroscience Societies and John Wiley & Sons Ltd.
Exploring the spatial variability of soil properties in an Alfisol Catena
DOE Office of Scientific and Technical Information (OSTI.GOV)
Rosemary, F.; Vitharana, U. W. A.; Indraratne, S. P.
Detailed digital soil maps showing the spatial heterogeneity of soil properties consistent with the landscape are required for site-specific management of plant nutrients, land use planning and process-based environmental modeling. We characterized the short-scale spatial heterogeneity of soil properties in an Alfisol catena in a tropical landscape of Sri Lanka. The impact of different land-uses (paddy, vegetable and un-cultivated) was examined to assess the impact of anthropogenic activities on the variability of soil properties at the catenary level. Conditioned Latin hypercube sampling was used to collect 58 geo-referenced topsoil samples (0–30 cm) from the study area. Soil samples were analyzedmore » for pH, electrical conductivity (EC), organic carbon (OC), cation exchange capacity (CEC) and texture. The spatial correlation between soil properties was analyzed by computing crossvariograms and subsequent fitting of theoretical model. Spatial distribution maps were developed using ordinary kriging. The range of soil properties, pH: 4.3–7.9; EC: 0.01–0.18 dS m –1 ; OC: 0.1–1.37%; CEC: 0.44– 11.51 cmol (+) kg –1 ; clay: 1.5–25% and sand: 59.1–84.4% and their coefficient of variations indicated a large variability in the study area. Electrical conductivity and pH showed a strong spatial correlation which was reflected by the cross-variogram close to the hull of the perfect correlation. Moreover, cross-variograms calculated for EC and Clay, CEC and OC, CEC and clay and CEC and pH indicated weak positive spatial correlation between these properties. Relative nugget effect (RNE) calculated from variograms showed strongly structured spatial variability for pH, EC and sand content (RNE < 25%) while CEC, organic carbon and clay content showed moderately structured spatial variability (25% < RNE < 75%). Spatial dependencies for examined soil properties ranged from 48 to 984 m. The mixed effects model fitting followed by Tukey's post-hoc test showed significant effect of land use on the spatial variability of EC. Our study revealed a structured variability of topsoil properties in the selected tropical Alfisol catena. Except for EC, observed variability was not modified by the land uses. Investigated soil properties showed distinct spatial structures at different scales and magnitudes of strength. Our results will be useful for digital soil mapping, site specific management of soil properties, developing appropriate land use plans and quantifying anthropogenic impacts on the soil system.« less
KWASNIEWSKI, WOJCIECH; GOZDZICKA-JOZEFIAK, ANNA; WOLUN-CHOLEWA, MARIA; POLAK, GRZEGORZ; SIEROCINSKA-SAWA, JADWIGA; KWASNIEWSKA, ANNA; KOTARSKI, JAN
2016-01-01
Endometrial carcinoma (EC) is the most common type of gynecological malignancy. Studies have demonstrated that the insulin growth factor (IGF) pathway is implicated in the development of endometrial tumors and that the serum levels of IGF-1 are affected by estrogen. Most EC cells with high microsatellite instability (MSI-H) accumulate mutations at a microsatellite sequence in the IGF-1 gene. The present study investigated the CA repeat polymorphism in the P1 promoter region of the IGF-1 gene among Caucasian females with endometrial hyperplasia, EC and healthy control subjects, whose blood serum and surgical tissue specimens were analyzed. Differences or correlations between the analyzed parameters [serum levels of IGF-1 and IGF binding protein (IGFBP)-1 and IGFBP-3 as well as estrogens among the polymorphisms] were verified using the χ2, Mann-Whitney U, Kruskal-Wallis or Spearman's rank correlation tests. A PCR amplification and DNA sequencing analysis was used for identification of (CA)n repeats in the P1 region of IGF-1. ELISA was used to determine the blood serum levels of IGF-1, IGFBP-1, IGFBP-3 and estrogens. Furthermore, IGF-1 was assessed in endometrial tissues by immunohistochemical analysis. The present study indicated no statistically significant differences between serum levels of IGF-1, IGFBP-1, IGFBP-3 and estrone, estriol and estradiol in the control and study groups. A significant correlation was identified between the IGF-1 levels and estrone levels in the MSI-H polymorphism (r=−0.41, P=0.012) as well as a highly negative correlation between IGF-1 levels and the estradiol levels in the MSI-H polymorphism (r=−0.6, P=0.002). Genotypes without the 19 CA allele were predominantly found in EC. Furthermore, statistical analysis indicated that the number of IGF-1-expressing cells was significantly elevated in MSI-H type 18-20 (P= 0.0072), MSI-L type 19-20 (P=0.025) and microsatellite-stable MSS type 19-19 (P=0.024) compared with those in the MSI-H 20-20 genotype. The present study suggested that it is rather likely that the polymorphisms in the IGF-1 promoter are associated with EC in Caucasian females with regard to its development. In the present study, polymorphisms of the IGF-1 promoter may have been introduced during the genesis of EC and contributed to it by leading to aberrant expression of IGF-1. PMID:27121258
Biogeochemical modelling vs. tree-ring data - comparison of forest ecosystem productivity estimates
NASA Astrophysics Data System (ADS)
Zorana Ostrogović Sever, Maša; Barcza, Zoltán; Hidy, Dóra; Paladinić, Elvis; Kern, Anikó; Marjanović, Hrvoje
2017-04-01
Forest ecosystems are sensitive to environmental changes as well as human-induce disturbances, therefore process-based models with integrated management modules represent valuable tool for estimating and forecasting forest ecosystem productivity under changing conditions. Biogeochemical model Biome-BGC simulates carbon, nitrogen and water fluxes, and it is widely used for different terrestrial ecosystems. It was modified and parameterised by many researchers in the past to meet the specific local conditions. In this research, we used recently published improved version of the model Biome-BGCMuSo (BBGCMuSo), with multilayer soil module and integrated management module. The aim of our research is to validate modelling results of forest ecosystem productivity (NPP) from BBGCMuSo model with observed productivity estimated from an extensive dataset of tree-rings. The research was conducted in two distinct forest complexes of managed Pedunculate oak in SE Europe (Croatia), namely Pokupsko basin and Spačva basin. First, we parameterized BBGCMuSo model at a local level using eddy-covariance (EC) data from Jastrebarsko EC site. Parameterized model was used for the assessment of productivity on a larger scale. Results of NPP assessment with BBGCMuSo are compared with NPP estimated from tree ring data taken from trees on over 100 plots in both forest complexes. Keywords: Biome-BGCMuSo, forest productivity, model parameterization, NPP, Pedunculate oak
Partitioning Carbon Dioxide and Water Vapor Fluxes Using Correlation Analysis
USDA-ARS?s Scientific Manuscript database
Partitioning of eddy covariance flux measurements is routinely done to quantify the contributions of separate processes to the overall fluxes. Measurements of carbon dioxide fluxes represent the difference between gross ecosystem photosynthesis and total respiration, while measurements of water vapo...
Archer, Edward; Petrie, Bruce; Kasprzyk-Hordern, Barbara; Wolfaardt, Gideon M
2017-05-01
A large number of emerging contaminants (ECs) are known to persist in surface waters, and create pressure on wastewater treatment works (WWTW) for their effective removal. Although a large database for the levels of these pollutants in water systems exist globally, there is still a lack in the correlation of the levels of these pollutants with possible long-term adverse health effects in wildlife and humans, such as endocrine disruption. The current study detected a total of 55 ECs in WWTW influent surface water, 41 ECs in effluent, and 40 ECs in environmental waters located upstream and downstream of the plant. A list of ECs persisted through the WWTW process, with 28% of all detected ECs removed by less than 50%, and 18% of all ECs were removed by less than 25%. Negative mass balances of some pharmaceuticals and metabolites were observed within the WWTW, suggesting possible back-transformation of ECs during wastewater treatment. Three parental illicit drug compounds were detected within the influent of the WWTW, with concentrations ranging between 27.6 and 147.0 ng L -1 for cocaine, 35.6-120.6 ng L -1 for mephedrone, and 270.9-450.2 ng L -1 for methamphetamine. The related environmental risks are also discussed for some ECs, with particular reference to their ability to disrupt endocrine systems. The current study propose the potential of the pharmaceuticals carbamazepine, naproxen, diclofenac and ibuprofen to be regarded as priority ECs for environmental monitoring due to their regular detection and persistence in environmental waters and their possible contribution towards adverse health effects in humans and wildlife. Copyright © 2017 The Authors. Published by Elsevier Ltd.. All rights reserved.
Reoma, Junewai L.; Rojas, Alvaro; Krause, Eric M.; Obeid, Nabeel R.; Lafayette, Nathan G.; Pohlmann, Joshua R.; Padiyar, Niru P.; Punch, Jeffery D; Cook, Keith E.; Bartlett, Robert H
2009-01-01
Extracorporeal cardiopulmonary support(ECS) of donors following cardiac death(DCD) has been shown to improve abdominal organs for transplantation. This study assesses whether pulmonary congestion occurs during ECS with the heart arrested and describes an in-vivo method to assess if lungs are suitable for transplantation from DCD donors following ECS resuscitation. Cardiac arrest was induced in 30 kg pigs, followed by 10min. of warm ischemia. Cannulas were placed into right atrium (RA) and iliac artery, and veno-arterial ECS was initiated for 90min with lungs inflated, Group 1 (n=5) or deflated Group 2 (n=3). Left atrial pressures were measured as a marker for pulmonary congestion. After 90 min of ECS, lung function was evaluated. Cannulae were placed into the pulmonary artery (PA) and left ventricle (LV). A second pump was included, and ECS was converted to a bi-VAD system. The RVAD drained from the RA and pumped into the PA, and the LVAD drained the LV and pumped into the iliac. This brought the lungs back into circulation for a 1hr assessment period. The oxygenator was turned off, and ventilation restarted. Flows, blood gases, pulmonary artery and left atrial pressures, and compliance were recorded. In both groups: LA pressure was <15mmHg during ECS. During the lung assessment period, PA flows were 1.4−2.2 liter/min. PO2 was >300mmHg, with normal PCO2. ECS resuscitation of DCD donors is feasible and allows for assessment of function prior to procurement. ECS does not cause pulmonary congestion, and lungs retain adequate function for transplantation. Compliance correlated with lung function. PMID:19506464