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Sample records for elkhorn slough habitat

  1. Potential Marine Benthic Habitat Map of Elkhorn Slough, California

    NASA Astrophysics Data System (ADS)

    Walton, K.; Garcia-Garcia, A.; Endris, C.

    2015-12-01

    While marine benthic habitat maps have been created for a big portion of California's coastline, the Elkhorn Slough Reserve lacks one. We have tentatively mapped its types of seafloor using a well-known classification system, which includes various types of large-scale and small-scale features, bottom induration, vegetation, surface texture, and slope. Seismic lines and sediment cores were collected to create the map. CSUMB's Seafloor Mapping Lab as well as the Elkhorn Slough National Estuarine Research Reserve provided bathymetry, raster files, and shapefiles to be incorporated into the project. We divided the Slough into three main sections: the Lower, Central, and Upper Slough. Sand sediments were found in the Lower Slough, which is a high-energy environment, whilst mud or silt sediments dominated the rest of the Slough. Five classification categories were used to describe the Slough's seafloor: flat sand sediments, sloped sand sediments, flat mud sediments, sloped mud sediments, and eelgrass on sandy sediment. Bathymetry data was used to discuss the Slough's sediment erosion and accretion. This preliminary map can be used to understand the location of various marine habitats, which is important for the wildlife conservation and planning efforts in the Slough. Acknowledgments: CSUMB (chirp), Ron Eby (ESNEER), Geoff (Triton Imaging Inc.). The Non-Senate Faculty Professional Development Award 19900-433332-ESGARC and ONR grant N00014-14-1-0172 supported this research.

  2. Life on the Tidal Mudflats: Elkhorn Slough.

    ERIC Educational Resources Information Center

    Andresen, Ruth

    Life in an estuarine environment is studied in this set of audio-visual materials prepared for grades 6-12. A 71-frame colored filmstrip, cassette tape narration, and teacher's guide focus upon Elkhorn Slough, a tidal mudflat in the Monterey Bay area, California. Topics examined range from river drainage and the effects of pollution on living…

  3. Life on the Tidal Mudflats: Elkhorn Slough.

    ERIC Educational Resources Information Center

    Andresen, Ruth

    Life in an estuarine environment is studied in this set of audio-visual materials prepared for grades 6-12. A 71-frame colored filmstrip, cassette tape narration, and teacher's guide focus upon Elkhorn Slough, a tidal mudflat in the Monterey Bay area, California. Topics examined range from river drainage and the effects of pollution on living…

  4. Erosion Patterns in Elkhorn Slough, Central California

    NASA Astrophysics Data System (ADS)

    Chen, Z.; Garcia-Garcia, A.; Shipton, G.; Eby, R.; Unkeles, H.

    2014-12-01

    The Elkhorn Slough in central California has gone through periods of erosion and high energy currents in the 1870s and periods of more deposition and lower energy in the 1920s-1940s. Since the construction of jetties at Moss Landing Harbor in the 1940s, the harbor mouth has dramatically increased tidal currents and with them, the patterns of erosion. Current strong tidal incursion (particularly ebb tides) has changed this environment into a very erosive one, transforming the mud banks and channel floor quickly. In order to evaluate the erosion processes in the Slough's underwater sediments we conducted two seismic surveys in 2012 and 2014. The EdgeTech SB-424 full-spectrum sub-bottom CHIRP profiler, was used with a default pulse which generates a sweep frequency of 4 kHz - 24 kHz for 10 ms, and a vertical resolution of 0.4 m. This system performed ideally in this shallow environment. The chirp lines show channels that abrade layers of older sediment, and areas with a very highly reflective seafloor reflector that we interpret as coarse sediments. This erosive process is extremely pronounced near the ocean (in the western end) and in the middle of the channel. Comparison of the sedimentation at the mouth and farther inland suggests that the velocity of water is significantly greater at the mouth. We discuss the patterns of sedimentation/erosion in the mouth of the slough and away from the ocean. We also discuss the differences in two years' time and if there is any evidence of changes in the geological processes. If current patterns continue, more and more of the slough will be weathered away, thus affecting the numerous species that currently live in it. Funding provided by the Office of Naval Research.

  5. Image applications for coastal resource planning: Elkhorn Slough Pilot Project

    NASA Technical Reports Server (NTRS)

    Kvitek, Rikk G.; Sharp, Gary D.; VanCoops, Jonathan; Fitzgerald, Michael

    1995-01-01

    The purpose of this project has been to evaluate the utility of digital spectral imagery at two levels of resolution for large scale, accurate, auto-classification of land cover along the Central California Coast. Although remote sensing technology offers obvious advantages over on-the-ground mapping, there are substantial trade-offs that must be made between resolving power and costs. Higher resolution images can theoretically be used to identify smaller habitat patches, but they usually require more scenes to cover a given area and processing these images is computationally intense requiring much more computer time and memory. Lower resolution images can cover much larger areas, are less costly to store, process, and manipulate, but due to their larger pixel size can lack the resolving power of the denser images. This lack of resolving power can be critical in regions such as the Central California Coast where important habitat change often occurs on a scale of 10 meters. Our approach has been to compare vegetation and habitat classification results from two aircraft-based spectral scenes covering the same study area but at different levels of resolution with a previously produced ground-truthed land cover base map of the area. Both of the spectral images used for this project were of significantly higher resolution than the satellite-based LandSat scenes used in the C-CAP program. The lower reaches of the Elkhorn Slough watershed was chosen as an ideal study site because it encompasses a suite of important vegetation types and habitat loss processes characteristic of the central coast region. Dramatic habitat alterations have and are occurring within the Elkhorn Slough drainage area, including erosion and sedimentation, land use conversion, wetland loss, and incremental loss due to development and encroachnnent by agriculture. Additonally, much attention has already been focused on the Elkhorn Slough due to its status as a National Marine Education and Research

  6. Elkhorn Slough: Detecting Eutrophication through Geospatial Modeling Applications

    NASA Astrophysics Data System (ADS)

    Caraballo Álvarez, I. O.; Childs, A.; Jurich, K.

    2016-12-01

    Elkhorn Slough in Monterey, California, has experienced substantial nutrient loading and eutrophication over the past 21 years as a result of fertilizer-rich runoff from nearby agricultural fields. This study seeks to identify and track spatial patterns of eutrophication hotspots and the correlation to land use changes, possible nutrient sources, and general climatic trends using remotely sensed and in situ data. Threats of rising sea level, subsiding marshes, and increased eutrophication hotspots demonstrate the necessity to analyze the effects of increasing nutrient loads, relative sea level changes, and sedimentation within Elkhorn Slough. The Soil & Water Assessment Tool (SWAT) model integrates specified inputs to assess nutrient and sediment loading and their sources. TerrSet's Land Change Modeler forecasts the future potential of land change transitions for various land cover classes around the slough as a result of nutrient loading, eutrophication, and increased sedimentation. TerrSet's Earth Trends Modeler provides a comprehensive analysis of image time series to rapidly assess long term eutrophication trends and detect spatial patterns of known hotspots. Results from this study will inform future coastal management practices and provide greater spatial and temporal insight into Elkhorn Slough eutrophication dynamics.

  7. Tidal Wave Reflectance, Evolution and Distortion in Elkhorn Slough, CA

    DTIC Science & Technology

    2013-03-01

    NAVAL POSTGRADUATE SCHOOL MONTEREY , CALIFORNIA THESIS Approved for public release; distribution is unlimited TIDAL WAVE...AUTHOR(S) Casey J. Gon 7. PERFORMING ORGANIZATION NAME(S) AND ADDRESS(ES) Naval Postgraduate School Monterey , CA 93943–5000 8. PERFORMING...determined using four co-located pressure and velocity sensors longitudinally deployed in Elkhorn Slough, Monterey Bay, CA, to describe tidal wave evolution

  8. Paleoecological Perspectives on Tidal Marsh Degradation at Elkhorn Slough, California

    NASA Astrophysics Data System (ADS)

    Watson, E. B.; Wasson, K.; Woolfolk, A.; van Dyke, E.

    2007-05-01

    Elkhorn Slough is the second largest area of estuarine tidal wetlands in California, and one of the first U.S. estuarine sanctuaries. Region-wide, 90% of historic tidal wetlands have been lost or restricted from tidal flow due to diking for agricultural use, salt pond construction, and development. However, wetland loss at Elkhorn Slough is currently being driven largely by tidal erosion, and the subsequent expansion of tidal channels and shoreline recession. This study reports on the use of paleoecological analyses to support and inform current restoration and conservation activities at Elkhorn Slough. Analyses of three sediment cores for fossil pollen, organic content, accretion rates, and the removal and stratigraphic description of twelve additional cores have established the timing of marsh establishment, current and prehistoric estuarine salinity, wetland plant abundance and distributions, and the relative contributions of mineral and organic sediment to wetland sediment accumulation. By understanding prehistoric processes and conditions and past variability more thoroughly, managers will be able to evaluate conservation, restoration, and management alternatives in a more informed fashion.

  9. Analysis of Salinity Intrusion in the San Francisco Bay-Delta Using a GA-Optimized Neural Net, and Application of the Model to Prediction in the Elkhorn Slough Habitat

    NASA Astrophysics Data System (ADS)

    Thompson, D. E.; Rajkumar, T.

    2002-12-01

    , and used this to enhance the neural network by mapping input-output relationships in a more efficient manner. Furthermore, the neural network implicitly incorporates both the hydrodynamic and water quality models into a single predictive system. Although our model has not yet been enhanced to demonstrate improve pumping schedules, it has the possibility to support better decision-making procedures that may then be implemented by State agencies if desired. Our intention is now to use our calibrated Bay-Delta neural model in the smaller Elkhorn Slough complex near Monterey Bay where no such hydrodynamic model currently exists. At the Elkhorn Slough, we are fusing the neural net model of tidally-driven flow with in situ flow data and airborne and satellite remote sensing data. These further constrain the behavior of the model in predicting the longer-term health and future of this vital estuary. In particular, we are using visible data to explore the effects of the sediment plume that wastes into Monterey Bay, and infrared data and thermal emissivities to characterize the plant habitat along the margins of the Slough as salinity intrusion and sediment removal change the boundary of the estuary. The details of the Bay-Delta neural net model and its application to the Elkhorn Slough are presented in this paper.

  10. Analysis of Salinity Intrusion in the San Francisco Bay-Delta using a GA- Optimized Neural Net, and Application of the Model to Prediction in the Elkhorn Slough Habitat

    NASA Technical Reports Server (NTRS)

    Thompson, David E.; Rajkumar, T.; Clancy, Daniel (Technical Monitor)

    2002-01-01

    , and used this to enhance the neural network by mapping input-output relationships in a more efficient manner. Furthermore, the neural network implicitly incorporates both the hydrodynamic and water quality models into a single predictive system. Although our model has not yet been enhanced to demonstrate improve pumping schedules, it has the possibility to support better decision-making procedures that may then be implemented by State agencies if desired. Our intention is now to use this model in the smaller Elkhorn Slough complex near Monterey Bay where no such hydrodynamic model currently exists. At the Elkhorn Slough, we are fusing the neural net model of tidally-driven flow with in situ flow data and airborne and satellite remote sensation data. These further constrain the behavior of the model in predicting the longer-term health and future of this vital estuary.

  11. Analysis of Salinity Intrusion in the San Francisco Bay-Delta using a GA- Optimized Neural Net, and Application of the Model to Prediction in the Elkhorn Slough Habitat

    NASA Technical Reports Server (NTRS)

    Thompson, David E.; Rajkumar, T.; Clancy, Daniel (Technical Monitor)

    2002-01-01

    , and used this to enhance the neural network by mapping input-output relationships in a more efficient manner. Furthermore, the neural network implicitly incorporates both the hydrodynamic and water quality models into a single predictive system. Although our model has not yet been enhanced to demonstrate improve pumping schedules, it has the possibility to support better decision-making procedures that may then be implemented by State agencies if desired. Our intention is now to use this model in the smaller Elkhorn Slough complex near Monterey Bay where no such hydrodynamic model currently exists. At the Elkhorn Slough, we are fusing the neural net model of tidally-driven flow with in situ flow data and airborne and satellite remote sensation data. These further constrain the behavior of the model in predicting the longer-term health and future of this vital estuary.

  12. High Resolution Seismic Study of the Holocene Infill of the Elkhorn Slough, Central California

    EPA Science Inventory

    The seismic analysis of the sedimentary infill of the Elkhorn Slough, central California, reveals a succession of three main seismic units: U1, U2, U3, with their correspondent discontinuities d2, d3. These units are deposited over a paleorelief representing the channel location ...

  13. High Resolution Seismic Study of the Holocene Infill of the Elkhorn Slough, Central California

    EPA Science Inventory

    The seismic analysis of the sedimentary infill of the Elkhorn Slough, central California, reveals a succession of three main seismic units: U1, U2, U3, with their correspondent discontinuities d2, d3. These units are deposited over a paleorelief representing the channel location ...

  14. The oxygen isotopic composition of phosphate in Elkhorn Slough, California: A tracer for phosphate sources

    NASA Astrophysics Data System (ADS)

    McLaughlin, Karen; Cade-Menun, Barbara J.; Paytan, Adina

    2006-11-01

    Elkhorn Slough, a small seasonal estuary in central California, has been subjected to increased nutrient loading from agricultural and other non-point sources. However, because nutrients do not behave conservatively, tracing nutrient sources and cycling in ecosystems like Elkhorn Slough has been difficult to assess. This is particularly true of phosphorus (P), which has only one stable isotope and cannot be used as an isotopic tracer. However, isotopic fractionation of oxygen in phosphate at surface water temperatures only occurs as a result of enzyme-mediated, biochemical reactions. Thus, if phosphate demand is low relative to input and is not heavily cycled within the ecosystem, the δ18O of phosphate will reflect the isotopic composition of phosphate sources to the system. We utilized the δ18O of dissolved inorganic phosphate (DIP) within the main channel of the slough and nearby Moss Landing Harbor and the δ18O of reactive phosphate from sediment and soil samples collected within the watershed to understand phosphate sources and cycling within Elkhorn Slough. Trends in the δ18O of DIP were seasonally consistent with high values near the mouth reflecting oceanic phosphate (19.1‰-20.3‰), dropping to a minimum value near Hummingbird Island in the central slough (point source, 14.1‰-14.4‰), and increasing again near the head of the slough, reflecting fertilizer input (18.9‰-19.3‰). Reactive phosphate δ18O values extracted from sediments and soils in the watershed range from 10.6‰ in a drainage ditch to 22.3‰ in creek sediments near agriculture fields. The wide range in phosphate δ18O values reflects the variations in land use and application of different fertilizers in this agriculturally dominated landscape. These data suggest that phosphate δ18O can be an effective tool for identifying P sources and understanding phosphate dynamics in estuarine ecosystems.

  15. Soluble Nutrient and Trace Metal Fluxes from Aerosol Dry Deposition to Elkhorn Slough, CA

    NASA Astrophysics Data System (ADS)

    Gray, E. T.; Paytan, A.; Haskins, J.

    2009-12-01

    Atmospheric deposition has been widely recognized as a source of pollutants and nutrients to coastal ecosystems. Specifically, deposition includes nitrogen compounds, sulfur compounds, mercury, pesticides, phosphate, trace metals and other toxic compounds that can travel great distances in aerosols. These components can come from both natural (volcanoes, mineral dust, forest fires) and anthropogenic (fossil fuels, chemical byproducts, incineration of waste) sources. These pollutants may affect ecosystem health and water quality with environmental impacts such as eutrophication, contaminated fish and harmful algal blooms. In this study we focus on dry deposition to Elkhorn Slough, California. Size fractionated aerosol samples (PM 2.5 and PM 10) collected continuously over a seven day period using a cascade impactor are used along with a deposition model to determine the soluble nutrient and trace metal fluxes on the Elkhorn Slough ecosystem. Atmospheric deposition inputs will be compared to other sources and their potential impact evaluated.

  16. Nitrate sources and sinks in Elkhorn Slough, California: Results from long-term continuous in situ nitrate analyzers

    USGS Publications Warehouse

    Chapin, T.P.; Caffrey, J.M.; Jannasch, H.W.; Coletti, L.J.; Haskins, J.C.; Johnson, K.S.

    2004-01-01

    Nitrate and water quality parameters (temperature, salinity, dissolved oxygen, turbidity, and depth) were measured continuously with in situ NO 3 analyzers and water quality sondes at two sites in Elkhorn Slough in Central California. The Main Channel site near the mouth of Elkhorn Slough was sampled from February to September 2001. Azevedo Pond, a shallow tidal pond bordering agricultural fields further inland, was sampled from December 1999 to July 2001. Nitrate concentrations were recorded hourly while salinity, temperature, depth, oxygen, and turbidity were recorded every 30 min. Nitrate concentrations at the Main Channel site ranged from 5 to 65 ??M. The propagation of an internal wave carrying water from ???100 m depth up the Monterey Submarine Canyon and into the lower section of Elkhorn Slough on every rising tide was a major source of nitrate, accounting for 80-90% of the nitrogen load during the dry summer period. Nitrate concentrations in Azevedo Pond ranged from 0-20 ??M during the dry summer months. Nitrate in Azevedo Pond increased to over 450 ??M during a heavy winter precipitation event, and interannual variability driven by differences in precipitation was observed. At both sites, tidal cycling was the dominant forcing, often changing nitrate concentrations by 5-fold or more within a few hours. Water volume flux estimates were combined with observed nitrate concentrations to obtain nitrate fluxes. Nitrate flux calculations indicated a loss of 4 mmol NO3 m -2 d-1 for the entire Elkhorn Slough and 1 mmol NO 3 m-2 d-1 at Azevedo Pond. These results suggested that the waters of Elkhorn Slough were not a major source of nitrate to Monterey Bay but actually a nitrate sink during the dry season. The limited winter data at the Main Channel site suggest that nitrate was exported from Elkhorn Slough during the wet season. Export of ammonium or dissolved organic nitrogen, which we did not monitor, may balance some or all of the NO 3 flux.

  17. Students Correlate Direct and Indirect investigative methods at Elkhorn Slough, CA

    NASA Astrophysics Data System (ADS)

    Garcia-Garcia, A.; Lopez, M.; Sims, H.; King, N.; Hochstaedter, A.

    2013-12-01

    Students at Monterey Peninsula College (MPC, a public two-year college in central California) investigate the 3-500 year history of a coastal estuary by collecting and comparing sediment cores and sub-bottom seismic data. Sedimentation at Elkhorn Slough, the second largest estuary along the central California coast, has been influenced by both natural and anthropogenic factors within the last 100 years. In the classroom, students are first introduced to fundamental principles of sedimentation and stratigraphy, as well as seismic wave propagation. In the field, a collaborative program with the Elkhorn Slough National Estuarine Research Reserve (ESNERR) enables students to first collect 30-50cm PVC sediment cores from the mudflats of the estuary. Typical cores show layers that vary in proportions of sand and mud. Students interpret changes in depositional environment that could have caused the variation in sand and mud proportion. Second, students participate in the collection of sub-bottom seismic data. The students use an EdgeTech SB-424 full-spectrum sub-bottom chirp profiler using its default pulse which generates a sweep frequency of 4 kHz to 24 kHz for 10 ms. It has a vertical resolution of 40 cm. Students run seismic transects in the same area as the cores are collected. After field work is completed, students compare the direct methods (the cores) with the indirect methods (the seismic data) to understand the spatial extent of the layers they see in the cores. Principle outcomes include experience with the advantages and disadvantages of the coring and seismic data collection. Students discover that the stratigraphic information collected in the cores can be correlated over wider areas using the seismic information. In particular, the cores taken show a recent layer of mud over a sand/peat layer. The seismic data also shows the contact between the two layers as a sharp reflector due to the contrast in seismic properties of the two sediments. The overlying

  18. 50 CFR 226.216 - Critical habitat for elkhorn (Acropora palmata) and staghorn (A. cervicornis) corals.

    Code of Federal Regulations, 2013 CFR

    2013-10-01

    ... 50 Wildlife and Fisheries 10 2013-10-01 2013-10-01 false Critical habitat for elkhorn (Acropora... MAMMALS DESIGNATED CRITICAL HABITAT § 226.216 Critical habitat for elkhorn (Acropora palmata) and staghorn (A. cervicornis) corals. Critical habitat is designated for both elkhorn and staghorn corals as...

  19. 50 CFR 226.216 - Critical habitat for elkhorn (Acropora palmata) and staghorn (A. cervicornis) corals.

    Code of Federal Regulations, 2012 CFR

    2012-10-01

    ... 50 Wildlife and Fisheries 10 2012-10-01 2012-10-01 false Critical habitat for elkhorn (Acropora... MAMMALS DESIGNATED CRITICAL HABITAT § 226.216 Critical habitat for elkhorn (Acropora palmata) and staghorn (A. cervicornis) corals. Critical habitat is designated for both elkhorn and staghorn corals as...

  20. 50 CFR 226.216 - Critical habitat for elkhorn (Acropora palmata) and staghorn (A. cervicornis) corals.

    Code of Federal Regulations, 2011 CFR

    2011-10-01

    ... 50 Wildlife and Fisheries 9 2011-10-01 2011-10-01 false Critical habitat for elkhorn (Acropora... MAMMALS DESIGNATED CRITICAL HABITAT § 226.216 Critical habitat for elkhorn (Acropora palmata) and staghorn (A. cervicornis) corals. Critical habitat is designated for both elkhorn and staghorn corals as...

  1. 50 CFR 226.216 - Critical habitat for elkhorn (Acropora palmata) and staghorn (A. cervicornis) corals.

    Code of Federal Regulations, 2010 CFR

    2010-10-01

    ... 50 Wildlife and Fisheries 7 2010-10-01 2010-10-01 false Critical habitat for elkhorn (Acropora... MAMMALS DESIGNATED CRITICAL HABITAT § 226.216 Critical habitat for elkhorn (Acropora palmata) and staghorn (A. cervicornis) corals. Critical habitat is designated for both elkhorn and staghorn corals as...

  2. 50 CFR 226.216 - Critical habitat for elkhorn (Acropora palmata) and staghorn (A. cervicornis) corals.

    Code of Federal Regulations, 2014 CFR

    2014-10-01

    ... 50 Wildlife and Fisheries 10 2014-10-01 2014-10-01 false Critical habitat for elkhorn (Acropora... MAMMALS DESIGNATED CRITICAL HABITAT § 226.216 Critical habitat for elkhorn (Acropora palmata) and staghorn (A. cervicornis) corals. Critical habitat is designated for both elkhorn and staghorn corals as...

  3. Fine scale mapping of the structure and composition of the Elkhorn Slough (California, USA) tidal plume

    NASA Astrophysics Data System (ADS)

    Fischer, Andrew M.; Ryan, John P.; Rienecker, Erich V.

    2017-01-01

    Fine scale mapping of the structure and composition of a tidal ebb plume from a highly modified coastal lagoon (Elkhorn Slough, California, USA) was conducted by combining in situ, observational data sets from surface underway mapping, autonomous underwater vehicle (AUV) profiles, drifter tracking and the analysis of plume structure indices. The results reveal a 6-m-deep, jet-like, sediment laden plume extending one km offshore at low tide, which becomes entrained in the prevailing nearshore circulation. The plume that exits the slough is significantly different from the water that enters the slough. The rapidly evolving discharge plume is associated with elevated and highly correlated (r = 0.93) concentrations of dissolved organic matter and nitrate. While dissolved constituents remain in the shallow plume and are transported northward with the prevailing current, sediment may settle quickly through the water column and can be transported southwestward with the littoral currents. This study illustrates the applications of AUVs, when coupled with additional datasets, for generating higher resolution observational snapshots of dynamic and ephemeral tidal plumes. The results provide unique perspective on small-scale dynamics of an estuarine plume and its influence on coastal ecology.

  4. Hydrogen production in photosynthetic microbial mats in the Elkhorn Slough estuary, Monterey Bay

    PubMed Central

    Burow, Luke C; Woebken, Dagmar; Bebout, Brad M; McMurdie, Paul J; Singer, Steven W; Pett-Ridge, Jennifer; Prufert-Bebout, Leslie; Spormann, Alfred M; Weber, Peter K; Hoehler, Tori M

    2012-01-01

    Hydrogen (H2) release from photosynthetic microbial mats has contributed to the chemical evolution of Earth and could potentially be a source of renewable H2 in the future. However, the taxonomy of H2-producing microorganisms (hydrogenogens) in these mats has not been previously determined. With combined biogeochemical and molecular studies of microbial mats collected from Elkhorn Slough, Monterey Bay, California, we characterized the mechanisms of H2 production and identified a dominant hydrogenogen. Net production of H2 was observed within the upper photosynthetic layer (0–2 mm) of the mats under dark and anoxic conditions. Pyrosequencing of rRNA gene libraries generated from this layer demonstrated the presence of 64 phyla, with Bacteriodetes, Cyanobacteria and Proteobacteria dominating the sequences. Sequencing of rRNA transcripts obtained from this layer demonstrated that Cyanobacteria dominated rRNA transcript pyrotag libraries. An OTU affiliated to Microcoleus spp. was the most abundant OTU in both rRNA gene and transcript libraries. Depriving mats of sunlight resulted in an order of magnitude decrease in subsequent nighttime H2 production, suggesting that newly fixed carbon is critical to H2 production. Suppression of nitrogen (N2)-fixation in the mats did not suppress H2 production, which indicates that co-metabolic production of H2 during N2-fixation is not an important contributor to H2 production. Concomitant production of organic acids is consistent with fermentation of recently produced photosynthate as the dominant mode of H2 production. Analysis of rRNA % transcript:% gene ratios and H2-evolving bidirectional [NiFe] hydrogenase % transcript:% gene ratios indicated that Microcoelus spp. are dominant hydrogenogens in the Elkhorn Slough mats. PMID:22011721

  5. New Stable Isotopic Techniques of Nitrate Applied to Investigation of Estuarine Nitrate Sources in Elkhorn Slough, CA

    NASA Astrophysics Data System (ADS)

    Wankel, S. D.; Paytan, A.; Kendall, C.

    2003-12-01

    Elkhorn Slough is a tidally flushed estuary with exceptionally high amounts of N loading within the watershed. The main sources of N are thought to be in the form of nitrate from surface water runoff, agricultural fields, dairy farms, and urban runoff. More poorly quantified sources of nitrate may also include significant groundwater discharge as well as tidal inputs from Monterey Bay. Traditional studies, involving natural abundance stable isotopes within the N cycle, have been limited to δ 15N and thus to a 'one-dimensional' perspective on N cycling. The use of a multiple isotope (δ 15N and δ 18O) model allows disentanglement of superimposed transformation processes. Furthermore, a dual isotope approach permits a more discrete characterization of these sources, with the goal of estimating their roles in the N budget of Elkhorn Slough. The isotopic values of nitrate from transects, conducted in the main channel of the slough during both flood and ebb tides, suggest mixing of a marine end member (δ 15N = +11.6%; δ 18O = +10%) with several other nitrate sources having discernable isotopic compositions. The Moss Landing Harbor, near the mouth of Elkhorn Slough, has very high nitrate concentrations (>200uM) and is likely a significant source of nitrate to the slough (δ 15N = +15.4%; δ 18O = +9.9%). With each rising tide, there is a distinct tidal bore from Monterey Bay also delivering nitrate (approx. 30uM) of a unique nitrate isotopic composition (δ 15N = +5.3%; δ 18O = +9.9%). During certain sample collections, nitrate from the head of the slough, with an isotopic composition of +5.2% (δ 15N ) and +22.0% (δ 18O), is suggestive of nitrification (δ 15N = +5.2%; δ 18O = +22.3%). Each of these estuarine members reflects both the composition of the original source of nitrate within the sub-watershed as well as the degree of transformation of these sources. The δ 18O value for marine nitrate in this system is markedly higher than has been reported in open

  6. Combining 18 years of bathymetric surveys with terrestrial and aerial LiDAR surveys to monitor subtidal and intertidal morphology in Elkhorn Slough, California

    NASA Astrophysics Data System (ADS)

    Marks, C. I.; Kvitek, R.

    2012-12-01

    Estuaries are impacted and threatened by human activity, climate change and sea level rise. As a result, many highly altered estuarine systems are the focus of extensive habitat restoration and preservation projects. The success of management actions such as the addition or removal of sediment and tidal control structures hinges on the ability to accurately measure and predict rates of environmental change before and after implementation. In 2012 a subtidal sill was completed to reduce tidal scour and erosion in the second largest tidal salt marsh in California, the Elkhorn Slough. We analyzed the results of singlebeam and multibeam sonar surveys conducted in 1993, 2001, 2005, 2009, 2011, and 2012 to reveal changes in annual rates of erosion and accretion throughout the 12 km long main channel. We then combined bathymetic data with terrestrial and aerial LiDAR data to quantify volumetric changes in the tidal prism between 2005 and 2011. Our results show spatial and temporal patterns of erosion throughout the Slough prior to the construction of the sill as well as in the year after the sill was completed. This work is an example of how high-resolution sonar and LiDAR data can be combined to create comprehensive subtidal and intertidal estuarine digital elevation models and enable fine scale geomorphological monitoring.;

  7. Spatial variability in nitrification rates and ammonia-oxidizing microbial communities in the agriculturally impacted Elkhorn Slough estuary, California.

    PubMed

    Wankel, Scott D; Mosier, Annika C; Hansel, Colleen M; Paytan, Adina; Francis, Christopher A

    2011-01-01

    Ammonia oxidation-the microbial oxidation of ammonia to nitrite and the first step in nitrification-plays a central role in nitrogen cycling in coastal and estuarine systems. Nevertheless, questions remain regarding the connection between this biogeochemical process and the diversity and abundance of the mediating microbial community. In this study, we measured nutrient fluxes and rates of sediment nitrification in conjunction with the diversity and abundance of ammonia-oxidizing archaea (AOA) and ammonia-oxidizing betaproteobacteria (β-AOB). Sediments were examined from four sites in Elkhorn Slough, a small agriculturally impacted coastal California estuary that opens into Monterey Bay. Using an intact sediment core flowthrough incubation system, we observed significant correlations among NO(3)(-), NO(2)(-), NH(4)(+), and PO(4)(3+) fluxes, indicating a tight coupling of sediment biogeochemical processes. (15)N-based measurements of nitrification rates revealed higher rates at the less impacted, lower-nutrient sites than at the more heavily impacted, nutrient-rich sites. Quantitative PCR analyses revealed that β-AOB amoA (encoding ammonia monooxygenase subunit A) gene copies outnumbered AOA amoA gene copies by factors ranging from 2- to 236-fold across the four sites. Sites with high nitrification rates primarily contained marine/estuarine Nitrosospira-like bacterial amoA sequences and phylogenetically diverse archaeal amoA sequences. Sites with low nitrification rates were dominated by estuarine Nitrosomonas-like amoA sequences and archaeal amoA sequences similar to those previously described in soils. This is the first report measuring AOA and β-AOB amoA abundance in conjunction with (15)N-based nitrification rates in estuary sediments.

  8. Concerted sampling of water for trace organic contaminants by bivalves and semipermeable membrane devices in south San Francisco Bay and Elkhorn Slough

    SciTech Connect

    Hodgins, M.M.; Jacobson, L.A.; Prest, H.F.

    1995-12-31

    Bivalves have been widely applied as biomonitors in detecting organic contaminants in aquatic environments. Recently semipermeable membrane devices (SPMDS) have been shown to be effective pre-concentrators of trace levels of organic compounds in water and air. This study compares accumulation of trace organic compounds in oysters (Crassotrea gigas) and mussels (Mytilus califorianus) to those in SPMDs in south San Francisco Bay and Elkhorn Slough. The authors report concentration levels and trends in the profiles for organochlorine pesticides, polychlorinated biphenyls and polyaromatic hydrocarbons in SPMDs and bivalves from a series of locations in both areas.

  9. Habitat Suitability Index Models: Slough darter

    USGS Publications Warehouse

    Edwards, Elizabeth A.; Bacteller, Mary; Maughan, O. Eugene

    1982-01-01

    The native range of the slough darter (Etheostoma gracile) extends from western Alabama (Smith-Vaniz 1968) to central Texas and northward in the lowland areas of the former Mississippi Embayment and the Interior Low Plateau to central Illinois (Collette 1962) and southwestern Indiana (Gerking 1945). Its distribution also includes southeast Kansas (Metcalf 1959; Cross 1967) and northeast Oklahoma (Blair 1959). Natural hybridization with the blackside darter (Percina maculata) has been recorded (Page 1976).

  10. Using nitrate dual isotopic composition (δ15N and δ18O) as a tool for exploring sources and cycling of nitrate in an estuarine system: Elkhorn Slough, California

    USGS Publications Warehouse

    Wankel, Scott D.; Kendall, Carol; Paytan, Adina

    2009-01-01

    Nitrate (NO-3 concentrations and dual isotopic composition (??15N and ??18O) were measured during various seasons and tidal conditions in Elkhorn Slough to evaluate mixing of sources of NO-3 within this California estuary. We found the isotopic composition of NO-3 was influenced most heavily by mixing of two primary sources with unique isotopic signatures, a marine (Monterey Bay) and terrestrial agricultural runoff source (Old Salinas River). However, our attempt to use a simple two end-member mixing model to calculate the relative contribution of these two NO-3 sources to the Slough was complicated by periods of nonconservative behavior and/or the presence of additional sources, particularly during the dry season when NO-3 concentrations were low. Although multiple linear regression generally yielded good fits to the observed data, deviations from conservative mixing were still evident. After consideration of potential alternative sources, we concluded that deviations from two end-member mixing were most likely derived from interactions with marsh sediments in regions of the Slough where high rates of NO-3 uptake and nitrification result in NO-3 with low ?? 15N and high ??18O values. A simple steady state dual isotope model is used to illustrate the impact of cycling processes in an estuarine setting which may play a primary role in controlling NO -3 isotopic composition when and where cycling rates and water residence times are high. This work expands our understanding of nitrogen and oxygen isotopes as biogeochemical tools for investigating NO -3 sources and cycling in estuaries, emphasizing the role that cycling processes may play in altering isotopic composition. Copyright 2009 by the American Geophysical Union.

  11. Using nitrate dual isotopic composition (δ15N and δ18O) as a tool for exploring sources and cycling of nitrate in an estuarine system: Elkhorn Slough, California

    NASA Astrophysics Data System (ADS)

    Wankel, Scott D.; Kendall, Carol; Paytan, Adina

    2009-03-01

    Nitrate (NO3-) concentrations and dual isotopic composition (δ15N and δ18O) were measured during various seasons and tidal conditions in Elkhorn Slough to evaluate mixing of sources of NO3- within this California estuary. We found the isotopic composition of NO3- was influenced most heavily by mixing of two primary sources with unique isotopic signatures, a marine (Monterey Bay) and terrestrial agricultural runoff source (Old Salinas River). However, our attempt to use a simple two end-member mixing model to calculate the relative contribution of these two NO3- sources to the Slough was complicated by periods of nonconservative behavior and/or the presence of additional sources, particularly during the dry season when NO3- concentrations were low. Although multiple linear regression generally yielded good fits to the observed data, deviations from conservative mixing were still evident. After consideration of potential alternative sources, we concluded that deviations from two end-member mixing were most likely derived from interactions with marsh sediments in regions of the Slough where high rates of NO3- uptake and nitrification result in NO3- with low δ15N and high δ18O values. A simple steady state dual isotope model is used to illustrate the impact of cycling processes in an estuarine setting which may play a primary role in controlling NO3- isotopic composition when and where cycling rates and water residence times are high. This work expands our understanding of nitrogen and oxygen isotopes as biogeochemical tools for investigating NO3- sources and cycling in estuaries, emphasizing the role that cycling processes may play in altering isotopic composition.

  12. Assessment of Fish Habitat, Water Quality, and Selected Contaminants in Streambed Sediments in Noyes Slough, Fairbanks, Alaska, 2001-2002

    USGS Publications Warehouse

    Kennedy, Ben W.; Whitman, Matthew S.; Burrows, Robert L.; Richmond, Sharon A.

    2004-01-01

    During 2001-2002, the U.S. Geological Survey sampled streambed sediment at 23 sites, measured water quality at 26 sites, and assessed fish habitat for the entire length of Noyes Slough, a 5.5-mile slough of the Chena River in Fairbanks, Alaska. These studies were undertaken to document the environmental condition of the slough and to provide information to the public for consideration in plans to improve environmental conditions of the waterway. The availability of physical habitat for fish in the slough does not appear to be limited, although some beaver dams and shallow water may restrict movement, particularly during low flow. Elevated water temperatures in summer and low dissolved-oxygen concentrations are the principle factors adversely affecting water quality in Noyes Slough. Increased flow mitigated poor water-quality conditions and reduced the number of possible fish barriers. Flow appears to be the most prominent mechanism shaping water quality and fish habitat in Noyes Slough. Streambed sediment samples collected at 23 sites in 2001 were analyzed for 24 trace elements. Arsenic, lead, and zinc were the only trace elements detected in concentrations that exceed probable effect levels for the protection of aquatic life. The background concentration for arsenic in Noyes Slough is naturally elevated because of significant concentrations of arsenic in local bedrock and ground water. Sources of the zinc and lead contamination are uncertain, however both lead and zinc are common urban contaminants. Streambed-sediment samples from 12 sites in 2002 were analyzed for organochlorine pesticides, polychlorinated biphenyls (PCBs), and semivolatile organic compounds (SVOCs). The concentration of bis(2-ethylhexyl)phthalate of 2,600 micrograms per kilogram (?g/kg) for one sample from the site above Aurora Drive approached the aquatic-life criterion of 2,650 ?g/kg. Low concentrations of p-cresol, chrysene, and fluoranthene were detected in most of the sediment samples. The

  13. Diel Metagenomics and Metatranscriptomics of Elkhorn Slough Hypersaline Microbial Mat

    NASA Astrophysics Data System (ADS)

    Lee, J.; Detweiler, A. M.; Everroad, R. C.; Bebout, L. E.; Weber, P. K.; Pett-Ridge, J.; Bebout, B.

    2014-12-01

    To understand the variation in gene expression associated with the daytime oxygenic phototrophic and nighttime fermentation regimes seen in hypersaline microbial mats, a contiguous mat piece was subjected to sampling at regular intervals over a 24-hour diel period. Additionally, to understand the impact of sulfate reduction on biohydrogen consumption, molybdate was added to a parallel experiment in the same run. 4 metagenome and 12 metatranscriptome Illumina HiSeq lanes were completed over day / night, and control / molybdate experiments. Preliminary comparative examination of noon and midnight metatranscriptomic samples mapped using bowtie2 to reference genomes has revealed several notable results about the dominant mat-building cyanobacterium Microcoleus chthonoplastes PCC 7420. Dominant cyanobacterium M. chthonoplastes PCC 7420 shows expression in several pathways for nitrogen scavenging, including nitrogen fixation. Reads mapped to M. chthonoplastes PCC 7420 shows expression of two starch storage and utilization pathways, one as a starch-trehalose-maltose-glucose pathway, another through UDP-glucose-cellulose-β-1,4 glucan-glucose pathway. The overall trend of gene expression was primarily light driven up-regulation followed by down-regulation in dark, while much of the remaining expression profile appears to be constitutive. Co-assembly of quality-controlled reads from 4 metagenomes was performed using Ray Meta with progressively smaller K-mer sizes, with bins identified and filtered using principal component analysis of coverages from all libraries and a %GC filter, followed by reassembly of the remaining co-assembly reads and binned reads. Despite having relatively similar abundance profiles in each metagenome, this binning approach was able to distinctly resolve bins from dominant taxa, but also sulfate reducing bacteria that are desired for understanding molybdate inhibition. Bins generated from this iterative assembly process will be used for downstream mapping of transcriptomic reads as well as isolation efforts for Cyanobacteria-associated bacteria.

  14. Elkhorn ruling boosts state authority

    SciTech Connect

    Beecher, H.A.

    1995-03-01

    On 31 May 1994, a landmark U.S. Supreme Court decision expanded state authority to establish conditions to protect water quality and included stream flows, aesthetics, and, potentially, other elements in a broad definition of water quality. Called the {open_quotes}Elkhorn case{close_quotes} the Supreme Court ruled that the state of Washington Department of Ecology has authority to set instream flows for fish (primarily steelhead, chinook, and coho salmon) as a condition of a Water Quality Certification (WQC) issued by the state under Section 401 of the federal Clean Water Act (CWA). The case surrounded the petitioners (applicants) proposed building of the Elkhorn Hydroelectric Project on the Dosewallips River, Washington. The project would have consisted of a dam near the boundary of Olympic National Park and a pipeline to carry diverted water around a 1.2-mile bypass reach to a powerhouse at Olympic National Forest`s Elkhorn Campground.

  15. Relation between species assemblages of fishes and water quality in salt ponds and sloughs in South San Francisco Bay

    USGS Publications Warehouse

    Mejia, F.; Saiki, M.K.; Takekawa, John Y.

    2008-01-01

    This study was conducted to characterize fishery resources inhabiting salt-evaporation ponds and sloughs in South San Francisco Bay, and to identify key environmental variables that influence distribution of fishes. The ponds, which were originally constructed and operated for commercial production of salt, have undergone preliminary modifications (installation of culverts, gates, and other water-control structures) in preparation for full restoration to mostly tidal wetlands over the next 2 decades. We sampled fish from two salt-pond complexes (Alviso complex and Eden Landing complex), each consisting of several pond systems and their associated sloughs. Cluster analysis of species of fish indicated that at least two species assemblages were present, one characteristic of ponds and the other characteristic of sloughs and slough-like ponds. The slough-like ponds exhibited water-quality conditions (especially salinity) that resembled conditions found in the sloughs. Pond fishes were represented by 12 species, whereas slough fishes were represented by 22 species. Except for bay pipefish (Syngnathus leptorhynchus), which was unique to ponds, all species present in ponds also were in sloughs and slough-like ponds. These results indicated that species of fish in ponds originated from the sloughs. According to canonical-discriminant analysis, four environmental variables were useful for discriminating between the two species assemblages. Most discriminatory power was contributed by the index of habitat connectivity, a measure of minimum distance that a fish must travel to reach a particular pond from the nearest slough. Apparently, as fish from sloughs enter and move through interconnected salt ponds, environmental stress factors increase in severity until only the more tolerant species remain. The most likely source of stress is salinity, because this variable was second in importance to the index of habitat connectivity in discriminating between the two species

  16. Geologic Map of the Elkhorn Quadrangle, Park County, Colorado

    USGS Publications Warehouse

    Ruleman, Chester A.; Bohannon, Robert G.

    2008-01-01

    The Elkhorn thrust is defined by the juxtaposition of Early and Middle Proterozoic metamorphic and igneous rocks against Mesozoic and Tertiary rocks. Within the mapped area, an imbricate frontal thrust system juxtaposes Upper Cretaceous rocks against Paleocene rocks of the South Park Formation. In the southeastern section of the quadrangle, Middle Proterozoic igneous rocks are thrust over the South Park Formation. Syntectonic conglomerates (Txc) are preserved both on the hanging wall and footwall of the Elkhorn thrust. North of the map area we have identified normal faulting of probable Quaternary age.

  17. Measuring Taylor Slough Boundary and Internal Flows, Everglades National Park, Florida

    DTIC Science & Technology

    2001-01-01

    stricken wetlands, and saltwater intrusion in coastal areas. Taylor Slough (fig. 1), historically a major contributor of freshwater to Florida Bay, lies...populations of wading bird and animal species, and reduced habitat. Anthropogenic encroachment has placed the Cape Sable seaside sparrow, American crocodile ...cypress heads; saltwater influence is apparent by the transition to sawgrass and mangroves on the southern part of the slough. Precipitation

  18. Preliminary hydraulic analysis and implications for restoration of Noyes Slough, Fairbanks, Alaska

    USGS Publications Warehouse

    Burrows, Robert L.; Langley, Dustin E.; Evetts, David M.

    2000-01-01

    The present-day channels of the Chena River and Noyes Slough in downtown Fairbanks, Alaska, were formed as sloughs of the Tanana River, and part of the flow of the Tanana River occupied these waterways. Flow in these channels was reduced after the completion of Moose Creek Dike in 1945, and flow in the Chena River was affected by regulation from the Chena River Lakes Flood Control Project, which was completed in 1980. In 1981, flow in the Chena River was regulated for the first time by Moose Creek Dam, located about 20 miles upstream from Fairbanks. Constructed as part of the Chena River Lakes Flood Control Project, the dam was designed to reduce maximum flows to 12,000 cubic feet per second in downtown Fairbanks. Cross-section measurements made near the entrance to Noyes Slough show that the channel bed of the Chena River has been downcutting, thereby reducing the magnitude and duration of flow in the slough. Consequently the slough slowly is drying up. The slough provides habitat for wildlife such as ducks, beaver, and muskrat and is a fishery for anadromous and other resident species. Beavers have built 10 dams in the slough. Declining flow in the slough may endanger the remaining habitat. Residents of the community wish to restore flow in Noyes Slough to create a clean, flowing waterway during normal summer flows. The desire is to enhance the slough as a fishery and habitat for other wildlife and for recreational boating. During this study, existing and new data were compiled to determine past and present hydraulic interaction between the Chena River and Noyes Slough. The U.S. Army Corps of Engineers Hydrologic Engineering Center River Analysis System (HECRAS) computer program was used to construct a model to use in evaluating alternatives for increasing flow in the slough. Under present conditions, the Chena must flow at about 2,400 cubic feet per second or more for flow to enter Noyes Slough. In an average year, water flows in Noyes Slough for 106 days during

  19. 75 FR 44806 - Ellicott Slough National Wildlife Refuge, Santa Cruz County, CA

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-07-29

    ..., conduct climate change modeling, identify additional breeding ] and aestivation habitat for boundary... Wetlands Resources Act of 1986 (16 U.S.C. 3901-3932). The nearly 300-acre Ellicott Slough National Wildlife... to manage the Refuge as we have in the recent past. No major changes in habitat management would...

  20. Chickamauga National Military Park Tour Roads, Gordon's Slough Bridge, At ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    Chickamauga National Military Park Tour Roads, Gordon's Slough Bridge, At the confluence of Alexander's Bridge Road and Gordon's Slough, southeast of Alexander's Bridge, Fort Oglethorpe, Catoosa County, GA

  1. 33 CFR 117.892 - South Slough.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... 33 Navigation and Navigable Waters 1 2011-07-01 2011-07-01 false South Slough. 117.892 Section 117.892 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY BRIDGES DRAWBRIDGE OPERATION REGULATIONS Specific Requirements Oregon § 117.892 South Slough. The drawspan for the Oregon...

  2. 33 CFR 117.892 - South Slough.

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ... 33 Navigation and Navigable Waters 1 2012-07-01 2012-07-01 false South Slough. 117.892 Section 117.892 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY BRIDGES DRAWBRIDGE OPERATION REGULATIONS Specific Requirements Oregon § 117.892 South Slough. The drawspan for the Oregon...

  3. 33 CFR 117.892 - South Slough.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... 33 Navigation and Navigable Waters 1 2010-07-01 2010-07-01 false South Slough. 117.892 Section 117.892 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY BRIDGES DRAWBRIDGE OPERATION REGULATIONS Specific Requirements Oregon § 117.892 South Slough. The drawspan for the Oregon...

  4. 33 CFR 117.892 - South Slough.

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ... 33 Navigation and Navigable Waters 1 2014-07-01 2014-07-01 false South Slough. 117.892 Section 117.892 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY BRIDGES DRAWBRIDGE OPERATION REGULATIONS Specific Requirements Oregon § 117.892 South Slough. The drawspan for the Oregon...

  5. 33 CFR 117.892 - South Slough.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... 33 Navigation and Navigable Waters 1 2013-07-01 2013-07-01 false South Slough. 117.892 Section 117.892 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY BRIDGES DRAWBRIDGE OPERATION REGULATIONS Specific Requirements Oregon § 117.892 South Slough. The drawspan for the Oregon...

  6. 33 CFR 117.155 - Eureka Slough.

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ... 33 Navigation and Navigable Waters 1 2014-07-01 2014-07-01 false Eureka Slough. 117.155 Section 117.155 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY BRIDGES DRAWBRIDGE OPERATION REGULATIONS Specific Requirements California § 117.155 Eureka Slough. The drawspan...

  7. 33 CFR 117.165 - Lindsey Slough.

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ... 33 Navigation and Navigable Waters 1 2014-07-01 2014-07-01 false Lindsey Slough. 117.165 Section 117.165 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY BRIDGES DRAWBRIDGE OPERATION REGULATIONS Specific Requirements California § 117.165 Lindsey Slough. The...

  8. 33 CFR 117.157 - Georgiana Slough.

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ... 33 Navigation and Navigable Waters 1 2014-07-01 2014-07-01 false Georgiana Slough. 117.157 Section 117.157 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY BRIDGES DRAWBRIDGE OPERATION REGULATIONS Specific Requirements California § 117.157 Georgiana Slough. The draws...

  9. 33 CFR 117.150 - Connection Slough.

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ... 33 Navigation and Navigable Waters 1 2014-07-01 2014-07-01 false Connection Slough. 117.150 Section 117.150 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY BRIDGES DRAWBRIDGE OPERATION REGULATIONS Specific Requirements California § 117.150 Connection Slough. The draw...

  10. 33 CFR 117.879 - Isthmus Slough.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... DRAWBRIDGE OPERATION REGULATIONS Specific Requirements Oregon § 117.879 Isthmus Slough. The draw of the Oregon State secondary highway bridge, mile 1.0, at Coos Bay, shall open on signal if at least 24...

  11. 33 CFR 117.861 - Blind Slough.

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ... OPERATION REGULATIONS Specific Requirements Oregon § 117.861 Blind Slough. The draws of the Portland and... of Fisheries and the Fish Commission of Oregon) for the Columbia River Fishery below Bonneville Dam....

  12. 33 CFR 117.861 - Blind Slough.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... OPERATION REGULATIONS Specific Requirements Oregon § 117.861 Blind Slough. The draws of the Portland and... of Fisheries and the Fish Commission of Oregon) for the Columbia River Fishery below Bonneville Dam....

  13. 33 CFR 117.879 - Isthmus Slough.

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ... DRAWBRIDGE OPERATION REGULATIONS Specific Requirements Oregon § 117.879 Isthmus Slough. The draw of the Oregon State secondary highway bridge, mile 1.0, at Coos Bay, shall open on signal if at least 24...

  14. 33 CFR 117.879 - Isthmus Slough.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... DRAWBRIDGE OPERATION REGULATIONS Specific Requirements Oregon § 117.879 Isthmus Slough. The draw of the Oregon State secondary highway bridge, mile 1.0, at Coos Bay, shall open on signal if at least 24...

  15. 33 CFR 117.861 - Blind Slough.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... OPERATION REGULATIONS Specific Requirements Oregon § 117.861 Blind Slough. The draws of the Portland and... of Fisheries and the Fish Commission of Oregon) for the Columbia River Fishery below Bonneville Dam....

  16. 33 CFR 117.879 - Isthmus Slough.

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ... DRAWBRIDGE OPERATION REGULATIONS Specific Requirements Oregon § 117.879 Isthmus Slough. The draw of the Oregon State secondary highway bridge, mile 1.0, at Coos Bay, shall open on signal if at least 24...

  17. 33 CFR 117.861 - Blind Slough.

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ... OPERATION REGULATIONS Specific Requirements Oregon § 117.861 Blind Slough. The draws of the Portland and... of Fisheries and the Fish Commission of Oregon) for the Columbia River Fishery below Bonneville Dam....

  18. 33 CFR 117.861 - Blind Slough.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... OPERATION REGULATIONS Specific Requirements Oregon § 117.861 Blind Slough. The draws of the Portland and... of Fisheries and the Fish Commission of Oregon) for the Columbia River Fishery below Bonneville Dam....

  19. 33 CFR 117.879 - Isthmus Slough.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... DRAWBRIDGE OPERATION REGULATIONS Specific Requirements Oregon § 117.879 Isthmus Slough. The draw of the Oregon State secondary highway bridge, mile 1.0, at Coos Bay, shall open on signal if at least 24...

  20. 33 CFR 117.1059 - Snohomish River, Steamboat Slough, and Ebey Slough.

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ... draws of the twin, SR 529, highway bridges across the Snohomish River, mile 3.6, at Everett shall open... bridge across Ebey Slough, at Marysville, and at all other times to the drawtender at the twin SR 529... of the twin, SR 529, highway bridges across Steamboat Slough, miles 1.1 and 1.2, near Marysville...

  1. 33 CFR 117.1059 - Snohomish River, Steamboat Slough, and Ebey Slough.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... draws of the twin, SR 529, highway bridges across the Snohomish River, mile 3.6, at Everett shall open... bridge across Ebey Slough, at Marysville, and at all other times to the drawtender at the twin SR 529... of the twin, SR 529, highway bridges across Steamboat Slough, miles 1.1 and 1.2, near Marysville...

  2. Base of Principal Aquifer for the Elkhorn-Loup Model Area, North-Central Nebraska

    USGS Publications Warehouse

    McGuire, V.L.; Peterson, Steven M.

    2008-01-01

    In Nebraska, the water managers in the Natural Resources Districts and the Nebraska Department of Natural Resources are concerned with the effect of ground-water withdrawal on the availability of surface water and the long-term effects of ground-water withdrawal on ground- and surface-water resources. In north-central Nebraska, in the Elkhorn and Loup River Basins, ground water is used for irrigation, domestic supply, and public supply; surface water is used in this area for irrigation, recreation, and hydropower production. In recognition of these sometimes competing ground- and surface-water uses in the Elkhorn and Loup River Basins, the U.S. Geological Survey, the Lewis and Clark Natural Resources District, the Lower Elkhorn Natural Resources District, the Lower Loup Natural Resources District, the Lower Niobrara Natural Resources District, the Lower Platte North Natural Resources District, the Middle Niobrara Natural Resources District, the Upper Elkhorn Natural Resources District, and the Upper Loup Natural Resources District agreed to cooperatively study water resources in the Elkhorn and Loup River Basins. The goals of the overall study were to construct and calibrate a regional ground-water flow model of the area and to use that flow model as a tool to assess current and future effects of ground-water irrigation on stream base flow and to help develop long-term water-resource management strategies for this area, hereafter referred to as the Elkhorn-Loup model area. The Elkhorn-Loup model area covers approximately 30,800 square miles, and extends from the Niobrara River in the north to the Platte River in the south. The western boundary of the Elkhorn-Loup model area coincides with the western boundary of the Middle Niobrara, Twin Platte, and Upper Loup Natural Resources Districts; the eastern boundary coincides with the approximate location of the western extent of glacial till in eastern Nebraska. The principal aquifer in most of the Elkhorn-Loup model

  3. 76 FR 2411 - Notice of Designation of Elkhorn Ridge Wilderness, California

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-01-13

    ... existing rights until its designation as wilderness. Section 6(c) of the Act allows the Bureau of Land... passage. After designation of the Elkhorn Ridge Potential Wilderness Area, the BLM's Arcata Field Office...

  4. Legacy Mercury in Alviso Slough, South San Francisco Bay, California: Concentration, Speciation and Mobility

    USGS Publications Warehouse

    Marvin-DiPasquale, Mark; Cox, Marisa H.

    2007-01-01

    Mercury (Hg) is a significant contaminant in the waters, sediment and biota of San Francisco Bay, largely resulting from extensive historic regional mining activities. Alviso Slough represents one of the most mercury contaminated waterways entering south San Francisco Bay, as it is associated with the drainage of the New Almaden mercury mining district. Wetland habitat restoration of former salt manufacturing ponds adjacent to Alviso Slough is currently being planned. One management scenario being considered is a levee breach between Alviso Slough and Pond A8, which will allow reconnection of the salt pond with the tidal slough. This action is projected to increase the tidal prism within Alviso Slough and result in some degree of sediment remobilization as the main channel deepens and widens. The focus of the current study is to assess: a) the current mercury species composition and concentration in sediments within the Alviso Slough main channel and its associated fringing marsh plain, b) how much of each mercury species will be mobilized as a result of projected channel deepening and widening, and c) potential changes in inorganic reactive mercury bioavailability (for conversion to toxic methylmercury) associated with the mobilized sediment fraction. The current report details the field sampling approach and all laboratory analyses conducted, as well as provides the complete dataset associated with this project including a) a quantitative assessment of mercury speciation (total mercury, reactive mercury and methylmercury), b) estimates of the quantity of sediment and mercury mobilized based on 20-foot and 40-foot levee wall notch scenarios, and c) results from a sediment scour experiment examining the changes in the reactive mercury pool under four treatment conditions (high / low salinity and oxic / anoxic water). Ancillary sediment data also collected and reported herein include bulk density, organic content, magnetic susceptibility, percent dry weight, grain

  5. Is Acropora palmata (elkhorn coral) making a comeback in the Virgin Islands?

    USGS Publications Warehouse

    Rogers, Caroline S.

    2000-01-01

    White band disease (WBD) ravaged Acropora palmata (elkhorn coral) on many coral reefs in the Caribbean in the late 1970’s and 1980’s, including those around St. John and St. Croix, U. S. Virgin Islands—USVI (Gladfelter 1982, Rogers 1985). Quantitative data, photographs, and anecdotal observations indicate WBD killed large stands of elkhorn coral in the USVI from about 1976 until sometime in the late 1980’s. Branching Acroporid species, which are most susceptible to WBD, are also the most vulnerable to storm damage (Rogers et al. 1982). Since 1979, eight hurricanes have passed near or over the USVI. Because elkhorn coral contributed most of the living coral and determined the physical structure of many shallow reef zones, its demise dramatically altered many areas. But now, some of the reefs in the Virgin Islands once again have large, actively growing colonies of this important, reef-building species.

  6. Trends in Streamflow Characteristics of Selected Sites in the Elkhorn River, Salt Creek, and Lower Platte River Basins, Eastern Nebraska, 1928-2004, and Evaluation of Streamflows in Relation to Instream-Flow Criteria, 1953-2004

    USGS Publications Warehouse

    Dietsch, Benjamin J.; Godberson, Julie A.; Steele, Gregory V.

    2009-01-01

    The Nebraska Department of Natural Resources approved instream-flow appropriations on the Platte River to maintain fish communities, whooping crane roost habitat, and wet meadows used by several wild bird species. In the lower Platte River region, the Nebraska Game and Parks Commission owns an appropriation filed to maintain streamflow for fish communities between the Platte River confluence with the Elkhorn River and the mouth of the Platte River. Because Elkhorn River flow is an integral part of the flow in the reach addressed by this appropriation, the Upper Elkhorn and Lower Elkhorn Natural Resources Districts are involved in overall management of anthropogenic effects on the availability of surface water for instream requirements. The Physical Habitat Simulation System (PHABSIM) and other estimation methodologies were used previously to determine instream requirements for Platte River biota, which led to the filing of five water appropriations applications with the Nebraska Department of Natural Resources in 1993 by the Nebraska Game and Parks Commission. One of these requested instream-flow appropriations of 3,700 cubic feet per second was for the reach from the Elkhorn River to the mouth of the Platte River. Four appropriations were granted with modifications in 1998, by the Nebraska Department of Natural Resources. Daily streamflow data for the periods of record were summarized for 17 streamflow-gaging stations in Nebraska to evaluate streamflow characteristics, including low-flow intervals for consecutive durations of 1, 3, 7, 14, 30, 60, and 183 days. Temporal trends in selected streamflow statistics were not adjusted for variability in precipitation. Results indicated significant positive temporal trends in annual flow for the period of record at eight streamflow-gaging stations - Platte River near Duncan (06774000), Platte River at North Bend (06796000), Elkhorn River at Neligh (06798500), Logan Creek near Uehling (06799500), Maple Creek near Nickerson

  7. Distribution and abundance of elkhorn coral, Acropora palmata, and prevalence of white-band disease at Buck Island Reef National Monument, St. Croix, US Virgin Islands

    USGS Publications Warehouse

    Mayor, P.A.; Rogers, C.S.; Hillis-Starr, Z.-M.

    2006-01-01

    In the 1970s and 1980s elkhorn coral, Acropora palmata, declined dramatically throughout the Caribbean primarily due to white-band disease (WBD). In 2005, elkhorn coral was proposed for listing as threatened under the US Endangered Species Act. WBD was first documented at Buck Island Reef National Monument (BIRNM). Together with hurricanes WBD reduced live elkhorn coral coverage by probably over 90%. In the past decade some recovery has been observed at BIRNM. This study assessed the distribution and abundance of elkhorn coral and estimated the prevalence of WBD at the monument. Within an area of 795 ha, we estimated 97,232-134,371 (95% confidence limits) elkhorn coral colonies with any dimension of connected live tissue greater than one meter, about 3% of which were infected by WBD. Despite some recovery, the elkhorn coral density remains low and WBD may continue to present a threat to the elkhorn coral population. ?? Springer-Verlag 2006.

  8. ETIOLOGY OF WHITE POX, A LETHAL DISEASE OF THE CARIBBEAN ELKHORN CORAL, ACROPORA PALMATA.

    EPA Science Inventory

    Populations of the shallow-water Caribbean elkhorn coral, Acropora palmata, are being decimated by white pox disease, with losses in the Florida Keys typically in excess of 70%. Tissue loss is rapid, averaging 2.5 cm2 day-1. A bacterium isolated from diseased A. palmata was shown...

  9. ETIOLOGY OF WHITE POX, A LETHAL DISEASE OF THE CARIBBEAN ELKHORN CORAL, ACROPORA PALMATA.

    EPA Science Inventory

    Populations of the shallow-water Caribbean elkhorn coral, Acropora palmata, are being decimated by white pox disease, with losses in the Florida Keys typically in excess of 70%. Tissue loss is rapid, averaging 2.5 cm2 day-1. A bacterium isolated from diseased A. palmata was shown...

  10. 33 CFR 117.167 - Little Potato Slough.

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ... 33 Navigation and Navigable Waters 1 2012-07-01 2012-07-01 false Little Potato Slough. 117.167 Section 117.167 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY BRIDGES DRAWBRIDGE OPERATION REGULATIONS Specific Requirements California § 117.167 Little Potato Slough. The draw of...

  11. 33 CFR 117.167 - Little Potato Slough.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... 33 Navigation and Navigable Waters 1 2010-07-01 2010-07-01 false Little Potato Slough. 117.167 Section 117.167 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY BRIDGES DRAWBRIDGE OPERATION REGULATIONS Specific Requirements California § 117.167 Little Potato Slough. The draw of...

  12. 33 CFR 117.167 - Little Potato Slough.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... 33 Navigation and Navigable Waters 1 2013-07-01 2013-07-01 false Little Potato Slough. 117.167 Section 117.167 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY BRIDGES DRAWBRIDGE OPERATION REGULATIONS Specific Requirements California § 117.167 Little Potato Slough. The draw of...

  13. 33 CFR 117.167 - Little Potato Slough.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... 33 Navigation and Navigable Waters 1 2011-07-01 2011-07-01 false Little Potato Slough. 117.167 Section 117.167 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY BRIDGES DRAWBRIDGE OPERATION REGULATIONS Specific Requirements California § 117.167 Little Potato Slough. The draw of...

  14. 33 CFR 117.167 - Little Potato Slough.

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ... 33 Navigation and Navigable Waters 1 2014-07-01 2014-07-01 false Little Potato Slough. 117.167 Section 117.167 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY BRIDGES DRAWBRIDGE OPERATION REGULATIONS Specific Requirements California § 117.167 Little Potato Slough. The draw of...

  15. Mineral resources of the Elkhorn Wilderness Study Area, Broadwater and Jefferson Counties, Montana

    USGS Publications Warehouse

    Greenwood, William R.; Ludington, Steve; Miller, William R.; Hanna, William F.; Wenrich, Karen J.; Suits, Vivian J.; McHugh, John B.

    1990-01-01

    The Elkhorn Wilderness Study Area in west-central Montana has a moderate to high potential for resources of porphyry-type copper and molybdenum in the western part of the area, and a moderate to high potential for resources of gold, silver, lead, and zinc in replacement and vein deposits in the eastern part of the area. No evidence of potential oil, gas, and geothermal resources was identified in this study.

  16. Emerson Parcel of Dutch Slough Tidal Marsh Restoration Project

    EPA Pesticide Factsheets

    Information about the SFBWQP Emerson Parcel of Dutch Slough Tidal Marsh Restoration Project, part of an EPA competitive grant program to improve SF Bay water quality focused on restoring impaired waters and enhancing aquatic resources.

  17. Seasonal variation in habitat use by marsh fishes

    USGS Publications Warehouse

    Jordan, F.; Babbitt, K. J.; McIvor, C. C.

    1998-01-01

    We used I-m2 throw traps to examine habitat use by smallsized fishes within a mosaic of wet prairies and sloughs in the headwaters of the St. Johns River, Florida between August 1992 and November 1995. Estimates of total fish density and biomass varied temporally, but did not differ significantly between habitats. Patterns of habitat use, however, differed among the five numerically dominant species. Bluefin killifish, mosquitofish, and golden topminnows were more abundant in sloughs than in wet prairies. In contrast, Everglades pygmy sunfish were more abundant in wet prairies than in sloughs. Finally, the abundance of least killifish did not differ between habitats. Fish densities were positively correlated with plant biomass (i. e., habitat complexity) and negatively correlated with water depth (i. e., hydrology). Species richness and composition were similar among habitats. However, consistent differences in the relative abundance of numerically dominant species between habitats indicated some degree of habitat-specific assemblage structure. Most species were concentrated into deeper sloughs during drying events. This assemblage of small-sized fishes appears to respond relatively rapidly to changes in habitat structure and hydrologic conditions. We therefore recommend that resource managers consider using fishes as indicator taxa to evaluate the efficacy of ongoing restoration and management efforts in wetland systems.

  18. Field Flume Experiments Resolve Feedback Processes Governing Historic Formation, Recent Degradation, and Restoration of the Everglades Ridge and Slough Landscape

    NASA Astrophysics Data System (ADS)

    Harvey, J. W.; Noe, G. B.; Larsen, L. G.

    2008-12-01

    The ridge and slough landscape of the central Everglades formed several thousand years ago and remained stable until relatively recently. These flow parallel features with a cross sectional wavelength of approximately 100 m are strikingly similar to topographic and vegetation features in other low-gradient, floodplain wetlands found worldwide. The ridge and slough landscape is valued for its relatively high biodiversity and high connectivity of habitats. Loss of the topographic and vegetative pattern started with drainage efforts that began decreasing flows a century ago. The year 2000 marked the beginning of one of the most ambitious restorations of an aquatic ecosystem ever attempted. Although progress has been made, the processes responsible for degradation of landscape topographic pattern remain uncertain. Our hypothesis of Everglades landscape formation and pattern maintenance is based on feedbacks between flow velocity, vegetative flow resistance, and shear stress. A key element within that feedback is the redistribution of sediment from topographically lower to higher areas, with consequent effects on water level and plant community that drive differential rates of peat accretion in sloughs and ridges toward an equilibrium height difference. However, both the velocity threshold needed to entrain and redistribute organic sediment from sloughs to ridges, and the role of the emergent macrophytes in intercepting suspended particulate material, have remained uncertain. We constructed experimental flumes (8-m long by 1-m wide) in the Everglades and equipped them with pumping systems to elevate velocity by an order of magnitude (covering the possible range in the pre-drainage Everglades) over five steps in velocity. Natural mobilization of flocculent detrital material (floc) from the bed occurred in our experiments at velocities between 3.2 and 5.3 cm s-1, i.e., velocities that are rare in the present-day Everglades where 90% of observations typically are below 1

  19. Suspended-sediment flux and retention in a backwater tidal slough complex near the landward boundary of an estuary

    USGS Publications Warehouse

    Morgan-King, Tara L.; Schoellhamer, David H.

    2013-01-01

    Backwater tidal sloughs are commonly found at the landward boundary of estuaries. The Cache Slough complex is a backwater tidal region within the Upper Sacramento–San Joaquin Delta that includes two features that are relevant for resource managers: (1) relatively high abundance of the endangered fish, delta smelt (Hypomesus transpacificus), which prefers turbid water and (2) a recently flooded shallow island, Liberty Island, that is a prototype for habitat restoration. We characterized the turbidity around Liberty Island by measuring suspended-sediment flux at four locations from July 2008 through December 2010. An estuarine turbidity maximum in the backwater Cache Slough complex is created by tidal asymmetry, a limited tidal excursion, and wind-wave resuspension. During the study, there was a net export of sediment, though sediment accumulates within the region from landward tidal transport during the dry season. Sediment is continually resuspended by both wind waves and flood tide currents. The suspended-sediment mass oscillates within the region until winter freshwater flow pulses flush it seaward. The hydrodynamic characteristics within the backwater region such as low freshwater flow during the dry season, flood tide dominance, and a limited tidal excursion favor sediment retention.

  20. 77 FR 38482 - Drawbridge Operation Regulation; Three Mile Slough, Rio Vista, CA

    Federal Register 2010, 2011, 2012, 2013, 2014

    2012-06-28

    ... SECURITY Coast Guard 33 CFR Part 117 Drawbridge Operation Regulation; Three Mile Slough, Rio Vista, CA... across Three Mile Slough, mile 0.1, at Rio Vista, CA. The deviation is necessary to allow California... Slough, mile 0.1, at Rio Vista, CA. The drawbridge navigation span provides a vertical clearance of 12...

  1. 33 CFR 117.887 - Oregon Slough (North Portland Harbor).

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... 33 Navigation and Navigable Waters 1 2013-07-01 2013-07-01 false Oregon Slough (North Portland Harbor). 117.887 Section 117.887 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY BRIDGES DRAWBRIDGE OPERATION REGULATIONS Specific Requirements Oregon § 117.887 Oregon...

  2. 33 CFR 117.887 - Oregon Slough (North Portland Harbor).

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... 33 Navigation and Navigable Waters 1 2010-07-01 2010-07-01 false Oregon Slough (North Portland Harbor). 117.887 Section 117.887 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY BRIDGES DRAWBRIDGE OPERATION REGULATIONS Specific Requirements Oregon § 117.887 Oregon...

  3. 33 CFR 117.887 - Oregon Slough (North Portland Harbor).

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... 33 Navigation and Navigable Waters 1 2011-07-01 2011-07-01 false Oregon Slough (North Portland Harbor). 117.887 Section 117.887 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY BRIDGES DRAWBRIDGE OPERATION REGULATIONS Specific Requirements Oregon § 117.887 Oregon...

  4. 33 CFR 117.887 - Oregon Slough (North Portland Harbor).

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ... 33 Navigation and Navigable Waters 1 2012-07-01 2012-07-01 false Oregon Slough (North Portland Harbor). 117.887 Section 117.887 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY BRIDGES DRAWBRIDGE OPERATION REGULATIONS Specific Requirements Oregon § 117.887 Oregon...

  5. 33 CFR 117.887 - Oregon Slough (North Portland Harbor).

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ... 33 Navigation and Navigable Waters 1 2014-07-01 2014-07-01 false Oregon Slough (North Portland Harbor). 117.887 Section 117.887 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY BRIDGES DRAWBRIDGE OPERATION REGULATIONS Specific Requirements Oregon § 117.887 Oregon...

  6. 78 FR 60218 - Safety Zone; Old Mormon Slough, Stockton, CA

    Federal Register 2010, 2011, 2012, 2013, 2014

    2013-10-01

    ... creosote, pentachlorophenol (PCP), and compounds of arsenic, chromium and copper. Wood treating chemicals... fish kill in New Mormon Slough and the Stockton Deepwater Channel was attributed to a release of PCP... and groundwater in the shallow aquifer beneath the site are contaminated with PCP, various...

  7. The etiology of white pox, a lethal disease of the Caribbean elkhorn coral, Acropora palmata

    PubMed Central

    Patterson, Kathryn L.; Porter, James W.; Ritchie, Kim B.; Polson, Shawn W.; Mueller, Erich; Peters, Esther C.; Santavy, Deborah L.; Smith, Garriet W.

    2002-01-01

    Populations of the shallow-water Caribbean elkhorn coral, Acropora palmata, are being decimated by white pox disease, with losses of living cover in the Florida Keys typically in excess of 70%. The rate of tissue loss is rapid, averaging 2.5 cm2⋅day−1, and is greatest during periods of seasonally elevated temperature. In Florida, the spread of white pox fits the contagion model, with nearest neighbors most susceptible to infection. In this report, we identify a common fecal enterobacterium, Serratia marcescens, as the causal agent of white pox. This is the first time, to our knowledge, that a bacterial species associated with the human gut has been shown to be a marine invertebrate pathogen. PMID:12077296

  8. Fixed-bed gasification research using US coals. Volume 9. Gasification of Elkhorn bituminous coal

    SciTech Connect

    Thimsen, D.; Maurer, R.E.; Pooler, A.R.; Pui, D.; Liu, B.; Kittelson, D.

    1985-05-01

    A single-staged, fixed-bed Wellman-Galusha gasifier coupled with a hot, raw gas combustion system and scrubber has been used to gasify numerous coals from throughout the United States. The gasification test program is organized as a cooperative effort by private industrial participants and governmental agencies. The consortium of participants is organized under the Mining and Industrial Fuel Gas (MIFGa) group. This report is the ninth volume in a series of reports describing the atmospheric pressure, fixed-bed gasification of US coals. This specific report describes the gasification of Elkhorn bituminous coal. The period of gasificastion test was September 13 to October 12, 1983. 9 refs., 24 figs., 35 tabs.

  9. Pulmonary embolus arising from sloughed off myoma in late puerperium.

    PubMed

    Ergenoğlu, Ahmet Mete; Yeniel, Ahmet Özgür; Ulukuş, Murat; Aşkar, Niyazi

    2010-01-01

    Pulmonary embolus is a rare and serious complication of myoma uteri in the puerperium that resulted in late postpartum hysterectomy A 38-year-old, multiparous woman with a large myoma located on the left lateral wall of the uterus underwent emergency cesarean section due to fetal distres at 28 weeks. During the operation, a 15 cm sized intramural myoma was left without any intervention. On the 40(th) day postpartum the patient returned to the clinic with sepsis and pulmonary embolus because of obstruction of lochia drainage by the sloughed off myoma. The patient underwent hysterectomy and medical therapy for pulmonary embolus. We presented an unusual complication of uterine leiomyoma in the late postpartum period after cesarean section. Whatever the mode of sloughing off of the myoma, the results of the obstruction of lochia drainage may be devastating as in our case. To avoid these complications, clinicians must be aware of these symptoms and prompt intervention is essential.

  10. On the spatial organization of the ridge slough patterned landscape

    NASA Astrophysics Data System (ADS)

    Casey, S. T.; Cohen, M. J.; Acharya, S.; Kaplan, D. A.; Jawitz, J. W.

    2015-03-01

    A century of hydrologic modification has altered the physical and biological drivers of landscape processes in the Everglades (southern Florida, USA). Restoring the ridge-slough patterned landscape, a dominant feature of the historical system, is a priority, but requires an understanding of pattern genesis mechanisms. Physical experiments to evaluate alternative pattern formation mechanisms are limited by the time scales of peat accumulation and loss, necessitating model-based comparisons, where support for a particular mechanism is based on model replication of extant patterning and trajectories of degradation. However, multiple mechanisms yield a central feature of ridge-slough patterning (patch elongation in the direction of historical flow), limiting the utility of that characteristic for discriminating among alternatives. Using data from vegetation maps we investigated the statistical features of ridge-slough spatial patterning (ridge density, patch perimeter, elongation, patch-area scaling, and spatial periodicity) to establish rigorous criteria for evaluating model performance, and to inform controls on pattern variation across the contemporary system. Mean water depth explained significant variation in ridge density, total perimeter, and length : width ratios, illustrating significant pattern response to existing hydrologic gradients. Two independent analyses (2-D periodograms and patch size distributions) provide strong evidence against regular patterning, with the landscape exhibiting neither a characteristic wavelength nor a characteristic patch size, both of which are expected under conditions that produce regular patterns. Rather, landscape properties suggest robust scale-free patterning, indicating genesis from the coupled effects of local facilitation and a global negative feedback operating uniformly at the landscape-scale. Critically, this challenges widespread invocation of meso-scale negative feedbacks for explaining ridge-slough pattern origins

  11. 33 CFR 165.1201 - Safety Zone; Old Mormon Slough, Stockton California.

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ... 33 Navigation and Navigable Waters 2 2014-07-01 2014-07-01 false Safety Zone; Old Mormon Slough, Stockton California. 165.1201 Section 165.1201 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF....1201 Safety Zone; Old Mormon Slough, Stockton California. (a) General. This safety zone is...

  12. First line of defence: the role of sloughing in the regulation of cutaneous microbes in frogs

    PubMed Central

    Cramp, Rebecca L.; McPhee, Rebecca K.; Meyer, Edward A.; Ohmer, Michel E.; Franklin, Craig E.

    2014-01-01

    Amphibian populations worldwide are currently experiencing unprecedented declines due to the combined effects of emerging infectious disease and climate change. The skin is the first line of defence in preventing establishment of pathogens and associated infections. Although amphibians undergo regular sloughing of the outer layer of the skin, the potential for regular sloughing to play a role in influencing cutaneous microbial populations and pathogens has been largely overlooked. In the present study, we assessed the effect of skin sloughing on cultivable cutaneous bacterial abundance in the green tree frog (Litoria caerulea). We also examined the effects of temperature and hydric environment on sloughing frequency and microbial re-establishment rates. Our data showed that cultivable cutaneous bacterial abundance was significantly reduced by sloughing events, and frogs kept at ‘summer’ temperatures (23–33°C) sloughed almost twice as frequently as those maintained at ‘winter’ temperatures (13–23°C). No effect of hydric environment on sloughing frequency was observed, but we did find that sloughing in L. caerulea appeared to be linked to ambient light cycles. Examination of the effect of sloughing on microbial recolonization indicated that at cool temperatures, an extended intermoult interval allowed microbial abundance to reach higher levels than at warmer ‘summer’ temperatures (when the intermoult interval was significantly reduced). Our data suggest that sloughing may significantly influence the establishment and/or maintenance of cutaneous bacterial populations (pathogenic, mutualistic and/or commensal) and this, in turn, may be affected by environmental factors, such as ambient light and temperature. These findings are likely to be important for our understanding of the ecology of skin-based pathogens, such as the amphibian chytrid fungus, Batrachochytrium dendrobatidis. PMID:27293633

  13. First line of defence: the role of sloughing in the regulation of cutaneous microbes in frogs.

    PubMed

    Cramp, Rebecca L; McPhee, Rebecca K; Meyer, Edward A; Ohmer, Michel E; Franklin, Craig E

    2014-01-01

    Amphibian populations worldwide are currently experiencing unprecedented declines due to the combined effects of emerging infectious disease and climate change. The skin is the first line of defence in preventing establishment of pathogens and associated infections. Although amphibians undergo regular sloughing of the outer layer of the skin, the potential for regular sloughing to play a role in influencing cutaneous microbial populations and pathogens has been largely overlooked. In the present study, we assessed the effect of skin sloughing on cultivable cutaneous bacterial abundance in the green tree frog (Litoria caerulea). We also examined the effects of temperature and hydric environment on sloughing frequency and microbial re-establishment rates. Our data showed that cultivable cutaneous bacterial abundance was significantly reduced by sloughing events, and frogs kept at 'summer' temperatures (23-33°C) sloughed almost twice as frequently as those maintained at 'winter' temperatures (13-23°C). No effect of hydric environment on sloughing frequency was observed, but we did find that sloughing in L. caerulea appeared to be linked to ambient light cycles. Examination of the effect of sloughing on microbial recolonization indicated that at cool temperatures, an extended intermoult interval allowed microbial abundance to reach higher levels than at warmer 'summer' temperatures (when the intermoult interval was significantly reduced). Our data suggest that sloughing may significantly influence the establishment and/or maintenance of cutaneous bacterial populations (pathogenic, mutualistic and/or commensal) and this, in turn, may be affected by environmental factors, such as ambient light and temperature. These findings are likely to be important for our understanding of the ecology of skin-based pathogens, such as the amphibian chytrid fungus, Batrachochytrium dendrobatidis.

  14. Revision of middle Proterozoic Yellowjacket Formation, central Idaho, and revision of Cretaceous Slim Sam Formation, Elkhorn mountains area, Montana

    USGS Publications Warehouse

    Tysdal, Russell G.

    2000-01-01

    The Yellowjacket Formation is restricted to the strata originally assigned to it by Ross (1934). The Yellowjacket, the conformably overlying Hoodoo Quartzite, and succeeding unnamed argillaceous quartzite unit form a genetically related sequence that lies in a structural block delimited on the northeast by the Iron Lake fault. Directly northeast of the fault, strata currently assigned by others to the lower subunit of the Yellowjacket are correlated with the Apple Creek Formation in the Lemhi Range. Mapping in the western part of the Lemhi Range shows that the Apple Creek Formation lies depositionally above the Big Creek Formation and that no rocks of the Yellowjacket-Hoodoo unnamed unit stratigraphic sequence are present. In contrast, in the area of the Yellowjacket mapped by Ross (1934) and the area directly northeast of the Iron Lake Fault, the Big Creek Formation is absent, even though it is 2,700 m thick in the Lemhi Range. These data indicate that the Iron Lake Fault juxtaposed the Yellowjacket-Hoodoo-unnamed unit sequence against non-Yellowjacket strata to the northeast. The Upper Cretaceous Slim Sam Formation of the Elkhorn Mountains area is revised. Strata of the lower part are correlated with the regionally recognized marine Telegraph Creek Formation and the overlying marine to marginal marine Eagle Sandstone. Only lower strata of the Eagle are present in the study area and they are preserved discontinously. The nonmarine volcanic and volcaniclastic rocks of the upper part of the Slim Sam as originally defined retain the name Slim Sam Formation. These rocks, mainly of sedimentary origin, are genetically related to the Elkhorn Mountains Volcanics. The lower contact of the Slim Sam (restricted) is unconformable above the Eagle Sandstone or more commonly above the Telegraph Creek Formation. The upper contact is conformable with the Elkhorn Mountains Volcanics.

  15. Genetic seascape of the threatened Caribbean elkhorn coral, Acropora palmata, on the Puerto Rico Shelf.

    PubMed

    Mège, Pascal; Schizas, Nikolaos V; Reyes, Joselyd García; Hrbek, Tomas

    2015-06-01

    It has been proposed that the elkhorn coral, Acropora palmata, is genetically separated into two distinct provinces in the Caribbean, an Eastern and a Western population admixing in western Puerto Rico and around the Mona Passage. In this study, the genetic structure of A. palmata sampled at 11 Puerto Rican localities and localities from Curaçao, the Bahamas and Guadeloupe were examined. Analyses using five microsatellite markers showed that 75% of sampled colonies had unique genotypes, the rest being clone mates. Genetic diversity among genets was high (HE = 0.761) and consistent across localities (0.685 to 0.844). FST ranged from -0.011 to 0.047 supporting low but significant genetic differentiation between localities within the previously reported Eastern and Western genetic provinces. Plots of genetic per geographic distances and significant Mantel tests supported isolation-by-distance (IBD) within Puerto Rico. Analysis with the software Structure favored a scenario with weak differentiation between two populations, assigning eastern Puerto Rican locations (Fajardo and Culebra), Guadeloupe and Curaçao to the Caribbean Eastern population and western Puerto Rican locations (west of Vega Baja and Ponce), Mona and the Bahamas to the Caribbean Western population. Vieques and San Juan area harbored admixed profiles. Standardized FSTs per 1,000 km unit further supported higher differentiation between localities belonging to different Structure populations, with IBD being stronger within Puerto Rico than on larger regional scales. This stronger genetic transition seems to separate localities between putative Eastern and Western provinces in the eastern Puerto Rican region, not around the Mona Passage.

  16. Genetic seascape of the threatened Caribbean elkhorn coral, Acropora palmata, on the Puerto Rico Shelf

    PubMed Central

    Mège, Pascal; Schizas, Nikolaos V.; Reyes, Joselyd García; Hrbek, Tomas

    2014-01-01

    It has been proposed that the elkhorn coral, Acropora palmata, is genetically separated into two distinct provinces in the Caribbean, an Eastern and a Western population admixing in western Puerto Rico and around the Mona Passage. In this study, the genetic structure of A. palmata sampled at 11 Puerto Rican localities and localities from Curaçao, the Bahamas and Guadeloupe were examined. Analyses using five microsatellite markers showed that 75% of sampled colonies had unique genotypes, the rest being clone mates. Genetic diversity among genets was high (HE = 0.761) and consistent across localities (0.685 to 0.844). FST ranged from −0.011 to 0.047 supporting low but significant genetic differentiation between localities within the previously reported Eastern and Western genetic provinces. Plots of genetic per geographic distances and significant Mantel tests supported isolation-by-distance (IBD) within Puerto Rico. Analysis with the software Structure favored a scenario with weak differentiation between two populations, assigning eastern Puerto Rican locations (Fajardo and Culebra), Guadeloupe and Curaçao to the Caribbean Eastern population and western Puerto Rican locations (west of Vega Baja and Ponce), Mona and the Bahamas to the Caribbean Western population. Vieques and San Juan area harbored admixed profiles. Standardized FSTs per 1,000 km unit further supported higher differentiation between localities belonging to different Structure populations, with IBD being stronger within Puerto Rico than on larger regional scales. This stronger genetic transition seems to separate localities between putative Eastern and Western provinces in the eastern Puerto Rican region, not around the Mona Passage. PMID:26085704

  17. Dissolved Oxygen in Guadalupe Slough and Pond A3W, South San Francisco Bay, California, August and September 2007

    USGS Publications Warehouse

    Shellenbarger, Gregory; Schoellhamer, David H.; Morgan, Tara L.; Takekawa, John Y.; Athearn, Nicole D.; Henderson, Kathleen D.

    2008-01-01

    Initial restoration of former salt evaporation ponds under the South Bay Salt Pond Restoration Project in San Francisco Bay included the changing of water-flow patterns and the monitoring of water quality of discharge waters from the ponds. Low dissolved oxygen (DO) concentrations became evident in discharge waters when the ponds first were opened in 2004. This was a concern, because of the potential for low-DO pond discharge to decrease the DO concentrations in the sloughs that receive water from the ponds. However, as of summer 2007, only limited point-measurements of DO concentrations had been made in the receiving sloughs adjacent to the discharge ponds. In this report, we describe two short studies aimed at understanding the natural variability of slough DO and the effect of pond discharge on the DO concentrations in the sloughs. Pond A3W (a discharge pond) and the adjacent Guadalupe Slough were instrumented in August and September 2007 to measure DO, temperature, conductivity, and pH. In addition, Mowry and Newark Sloughs were instrumented during the August study to document DO variability in nearby sloughs that were unaffected by pond discharge. The results showed that natural tidal variability in the slough appeared to dominate and control the slough DO concentrations. Water-quality parameters between Guadalupe Slough and Mowry and Newark Sloughs could not be directly compared because deployment locations were different distances from the bay. Pond-discharge water was identified in Guadalupe Slough using the deployed instruments, but, counter to the previous assumption, the pond discharge, at times, increased DO concentrations in the slough. The effects of altering the volume of pond discharge were overwhelmed by natural spring-neap tidal variability in the slough. This work represents a preliminary investigation by the U.S. Geological Survey of the effects of pond discharge on adjacent sloughs, and the results will be used in designing a comprehensive DO

  18. Preparation of chitooligosaccharides from cicada slough and their antibacterial activity.

    PubMed

    Wu, Sheng-Jun; Pan, Sai-Kun; Wang, Hong-Bin; Wu, Jin-Hua

    2013-11-01

    In this study, chitooligosaccharides were prepared from cicada slough of Cryptotympana atrata Fabricius by hydrolysis using hydrogen peroxide (H2O2). Factors affecting the hydrolysis of chitosan were investigated and the optimum hydrolysis conditions were as follows: time, 4 h; temperature, 65 °C; amount of H2O2, 2% (v/v); and pH, 5. Under these conditions, the average degree of polymerisation decreased to ~4.5. The Fourier transform infrared spectra and product sugar composition indicate that there were no significant chemical changes in the backbones of the chitosan treated with H2O2.The chitooligosaccharides had high antibacterial activity against Bacillus subtilis, Staphylococcus aureus, and Escherichia coli at the concentration of 100mg/mL. Copyright © 2013 Elsevier B.V. All rights reserved.

  19. Living with a leaky skin: upregulation of ion transport proteins during sloughing.

    PubMed

    Wu, Nicholas C; Cramp, Rebecca L; Franklin, Craig E

    2017-06-01

    Amphibian skin is a multifunctional organ providing protection from the external environment and facilitating the physiological exchange of gases, water and salts with the environment. In order to maintain these functions, the outer layer of skin is regularly replaced in a process called sloughing. During sloughing, the outermost layer of the skin is removed in its entirety, which has the potential to interfere with skin permeability and ion transport, disrupting homeostasis. In this study, we measured, in vivo, the effects of sloughing on the cutaneous efflux of ions in toads Rhinella marina kept in freshwater conditions. We also measured transepithelial potential, cutaneous resistance, active ion transport and the distribution, abundance and gene expression of the key ion transport proteins sodium-potassium ATPase (NKA) and epithelial sodium channel (ENaC) during sloughing. We hypothesised that the increase in transepithelial efflux of ions during sloughing is a consequence of increased permeability and/or a reduction in the abundance or expression of cutaneous ion transport proteins, resulting in disruption of internal ion homeostasis. There was a significant increase in sodium and chloride efflux during sloughing in R. marina However, although in vitro skin resistance decreased after sloughing, active sodium transport increased commensurate with an increase in NKA and ENaC protein abundance in the skin. These changes in skin function associated with sloughing did not affect the maintenance of internal electrolyte homeostasis. These results suggest that during sloughing, amphibians actively maintain internal homeostasis by increasing cutaneous rates of ion uptake. © 2017. Published by The Company of Biologists Ltd.

  20. THE SPRING RUNOFF IN NEBRASKA’S ELKHORN RIVER WATERSHED AND ITS IMPACT ON TWO SENTINEL ORGANISMS

    PubMed Central

    KNIGHT, LINDSEY A.; CHRISTENSON, MATTHEW K.; TREASE, ANDREW J.; DAVIS, PAUL H.; KOLOK, ALAN S.

    2013-01-01

    The objectives of the present study were to determine 1) if temporal variability influenced the toxicity of Elkhorn River water and 2) if the toxic effect was consistent between two sentinel organisms, the fathead minnow (Pimephales promelas) and the northern leopard frog (Rana pipiens). During spring 2012, atrazine indicator strips were used to document the occurrence of agrichemical pulses in the Elkhorn River. Polar organic chemical integrative samplers (POCIS) were deployed for 14 d during both a pulse and post-pulse period as indicated by the atrazine strips. Pesticide concentrations detected in the POCIS extracts ranged from 1.6 to 281 fold higher during the pulse period compared to the post-pulse period. Fish and frog bioassays were conducted for 7 d, and hepatic mRNA expression of vitellogenin (Vtg) and estrogen receptor-α (ERα) was determined by quantitative real-time PCR (RT-qPCR). Compared to lab water controls, fish exposed to water collected during an agrichemical pulse experienced significant reductions in Vtg and ERα, whereas exposed female frogs did not. Male leopard frogs, in contrast experienced significant increases in the expression of ERα, whereas pulse exposed male minnows did not. The significant effects observed following agrichemical pulse exposure demonstrate 1) that episodic agrichemical runoff adversely impacts sentinel organisms, and 2) that the adverse impacts observed depends upon the sex and species of the sentinel organism. PMID:23504772

  1. 77 FR 22217 - Drawbridge Operation Regulation; Oregon Slough, Hayden Island, OR

    Federal Register 2010, 2011, 2012, 2013, 2014

    2012-04-13

    ... Santa Fe (BNSF) Railway Bridge across Oregon Slough, mile 3.2, at Hayden Island, OR. This deviation is... New Jersey Avenue SE., Washington, DC 20590, between 9 a.m. and 5 p.m., Monday through Friday, except...

  2. Response of the everglades ridge and slough landscape to climate variability and 20th-century water management

    USGS Publications Warehouse

    Bernhardt, C.E.; Willard, D.A.

    2009-01-01

    The ridge and slough landscape of the Florida Everglades consists of a mosaic of linear sawgrass ridges separated by deeper-water sloughs with tree islands interspersed throughout the landscape. We used pollen assemblages from transects of sediment cores spanning sawgrass ridges, sloughs, and ridge-slough transition zones to determine the timing of ridge and slough formation and to evaluate the response of components of the ridge and slough landscape to climate variability and 20th-century water management. These pollen data indicate that sawgrass ridges and sloughs have been vegetationally distinct from one another since initiation of the Everglades wetland in mid-Holocene time. Although the position and community composition of sloughs have remained relatively stable throughout their history, modern sawgrass ridges formed on sites that originally were occupied by marshes. Ridge formation and maturation were initiated during intervals of drier climate (the Medieval Warm Period and the Little Ice Age) when the mean position of the Intertropical Convergence Zone shifted southward. During these drier intervals, marsh taxa were more common in sloughs, but they quickly receded when precipitation increased. Comparison with regional climate records suggests that slough vegetation is strongly influenced by North Atlantic Oscillation variability, even under 20th-century water management practices. ?? 2009 by the Ecological Society of America.

  3. Response of the Everglades ridge and slough landscape to climate variability and 20th-century water management.

    PubMed

    Bernhardt, Christopher E; Willard, Debra A

    2009-10-01

    The ridge and slough landscape of the Florida Everglades consists of a mosaic of linear sawgrass ridges separated by deeper-water sloughs with tree islands interspersed throughout the landscape. We used pollen assemblages from transects of sediment cores spanning sawgrass ridges, sloughs, and ridge-slough transition zones to determine the timing of ridge and slough formation and to evaluate the response of components of the ridge and slough landscape to climate variability and 20th-century water management. These pollen data indicate that sawgrass ridges and sloughs have been vegetationally distinct from one another since initiation of the Everglades wetland in mid-Holocene time. Although the position and community composition of sloughs have remained relatively stable throughout their history, modern sawgrass ridges formed on sites that originally were occupied by marshes. Ridge formation and maturation were initiated during intervals of drier climate (the Medieval Warm Period and the Little Ice Age) when the mean position of the Intertropical Convergence Zone shifted southward. During these drier intervals, marsh taxa were more common in sloughs, but they quickly receded when precipitation increased. Comparison with regional climate records suggests that slough vegetation is strongly influenced by North Atlantic Oscillation variability, even under 20th-century water management practices.

  4. Evaluation and modification of CFB units at Slough Trading Estate

    SciTech Connect

    Vincent, R.Q.; Ballantyne, J.G.

    1997-12-31

    Slough Heat and Power (SHP), located just west of London, operates two circulating fluidized bed (CFB) combustion boilers (identified as FB1 and FB2) which assist in providing both power and steam to some 450 tenants located on the Slough Trading Estate. CFB technology was selected principally for (1) its fuel flexibility, (2) its ability to comply with government requirements on emissions and (3) its ability to fit the desired capacity units (with their relatively small footprint) into the limited space at the existing plant site. Construction of these units, each sized at 207,000 lb/hr at 1,260 psia and 948 F, began in 1989 with operation beginning in the latter part of 1991. Contract boiler acceptance tests were successfully passed in 1992. The units were originally intended to be operated on coal with gas and oil as back up fuels, depending on the economics. Government initiatives, designed to stimulate the development of non-fossil fueled power generation in the UK, catalyzed the owner`s interest in alternate fuels after the plant was built. Subsequently, the units have been co-fired with a blend of coal and densified refuse derived fuel (RDF) at up to a 50/50 heat input ratio. Early operation of these units was plagued by mechanical problems which affected the reliability and performance of the units. An independent assessment was made of the CFB units by FBT engineering Services to identify causes of operating, performance, and design shortcomings and to identify modifications that could be made to improve these areas. These problems have been associated with such areas of refractory, erosion, tubes and supports, clinkering and fouling, air distribution, and generally unstable unit performance. Because of the problems, the units have been operating only intermittently since commissioning. Based on the assessment of these problems, recommendations were made and design/operating changes implemented to correct these concerns and improve unit performance

  5. An application of LANDSAT multispectral imagery for the classification of hydrobiological systems, Shark River Slough, Everglades National Park, Florida

    NASA Technical Reports Server (NTRS)

    Rose, P. W.; Rosendahl, P. C. (Principal Investigator)

    1979-01-01

    Multivariant hydrologic parameters over the Shark River Slough were investigated. Ground truth was established utilizing U-2 infrared photography and comprehensive field data to define a control network which represented all hydrobiological systems in the slough. These data were then applied to LANDSAT imagery utilizing an interactive multispectral processor which generated hydrographic maps through classification of the slough and defined the multispectral surface radiance characteristics of the wetlands areas in the park. The spectral response of each hydrobiological zone was determined and plotted to formulate multispectral relationships between the emittent energy from the slough in order to determine the best possible multispectral wavelength combinations to enhance classification results. The extent of each hydrobiological zone in slough was determined and flow vectors for water movement throughout the slough established.

  6. The effects of wetland habitat structure on Florida apple snail density

    USGS Publications Warehouse

    Karunaratne, L.B.; Darby, P.C.; Bennetts, R.E.

    2006-01-01

    Wetlands often support a variety of juxtaposed habitat patches (e.g., grass-, shrub- or tree-dominated) differentially suited to support the inhabiting fauna. The proportion of available habitat types has been affected by human activity and consequently has contributed to degrading habitat quality for some species. The Florida apple snail (Pomacea paludosa) has drawn attention as a critical prey item for wetlands wildlife and as an indicator of wetlands restoration success in peninsular Florida, USA. An apparent contradiction has evolved wherein this species appears intolerant of drying events, but these disturbances may be necessary to maintain suitable habitat structure for apple snails. We recently reported that assertions regarding intolerance to dry downs in this species were inaccurate. Here, we compared snail density in habitats with (wet prairie) and without (slough) emergent macrophytes, as well as evaluating the effects of structural attributes within the broad wet prairie habitat type. Snail densities were greater in prairies relative to sloughs (??2= 12.90, df=1, P=0.0003), often by a factor of two to three. Within wet prairie habitats, we found greater snail densities in Panicum hemitomon as compared to Eleocharis cellulosa (??2=31.45, df=1, P=0.0001). Significantly fewer snails were found in dense E. cellulosa as compared to habitats with lower stem density (??2= 10.73, df=1, P=0.011). Our results indicate that wet prairie habitat supports greater snail densities than nymphaea-dominatd slough. Our results have implications for wetlands water management in that continuous inundation has been shown to convert wet prairie to slough habitat, and we suggest this should be avoided in support of apple snails and their predators. ?? 2006, The Society of Wetland Scientists.

  7. An Assessment of Habitat Quality Using Dissolved Oxygen Concentrations in Floodplain Water Bodies in Relation to River Flow and Mainstem Connectivity

    NASA Astrophysics Data System (ADS)

    Stofleth, J.; Andrews, E. S.; White, J. Q.

    2011-12-01

    The floodplains of the Apalachicola River, Florida include an intricate network of sloughs, lakes and wetlands. These floodplain water bodies provide essential spawning and nursery areas for a diverse array of aquatic organisms. The frequency and duration of Apalachicola River flows sufficient to hydraulically connect and thereby activate these floodplain features has decreased over time due to upstream dams, diversions, and modification to the channel geometry (incision and widening). The main objective of this study is to characterize the relationship between a key water quality parameter, dissolved oxygen (DO), to the hydraulic connectivity of the ecologically-important large slough systems within the Apalachicola River floodplain over a range of flow conditions. When DO concentrations drop, the quality of habitat for fish, invertebrates and other aquatic organisms are impacted. Hydraulic connection between the river and the floodplain sloughs contributes markedly to DO levels in the sloughs. To characterize the relationship between hydraulic connectivity and water quality, water level, DO, and temperature data were continuously monitored within four (4) major floodplain sloughs, one (1) oxbow lake, and mainstem (control) from August 2009 to January 2011. A comparison was made between statistically representative DO concentrations (daily mean, diurnal range, daily minimum and maximum) for each site and in the river. River discharge was estimated at each site from nearby gages. By examining distinct changes in DO signatures with increasing flow, it was possible to determine the approximate flow at which the sloughs and oxbow lakes begin to become activated or hydraulically connected (flowing condition) to the mainstem of the Apalachicola River, and at what flow rates these floodplain wetlands become fully connected. Based on this data, we drew conclusions about the availability of suitable habitat for native fish species in these slough systems across a range of

  8. DISTRIBUTION OF AQUATIC OFF-CHANNEL HABITATS AND ASSOCIATED RIPARIAN VEGETATION, WILLAMETTE RIVER, OREGON, USA

    EPA Science Inventory

    The extent of aquatic off-channel habitats such as secondary and side channels, sloughs, and alcoves, have been reduced more than 50% since the 1850s along the upper main stem of the Willamette River, Oregon, USA. Concurrently, the hydrogeomorphic potential, and associated flood...

  9. DISTRIBUTION OF AQUATIC OFF-CHANNEL HABITATS AND ASSOCIATED RIPARIAN VEGETATION, WILLAMETTE RIVER, OREGON, USA

    EPA Science Inventory

    The extent of aquatic off-channel habitats such as secondary and side channels, sloughs, and alcoves, have been reduced more than 50% since the 1850s along the upper main stem of the Willamette River, Oregon, USA. Concurrently, the hydrogeomorphic potential, and associated flood...

  10. Measuring Taylor Slough boundary and internal flows, Everglades National Park, Florida

    USGS Publications Warehouse

    Tillis, G.M.

    2001-01-01

    Four intensive data-collection efforts, intended to represent the spectrum of precipitation events and associated flow conditions, were conducted during 1997 and 1998 in the Taylor Slough Basin, Everglades National Park. Flow velocities were measured by newly developed, portable Acoustic Doppler Velocity meters along three transects bisecting the Taylor Slough Basin from east to west, roughly perpendicular to the centerline axis of the slough as well as a fourth transect along the slough's axis. These meters provided the required levels of accuracy in flow-velocity measurements while enabling the rapid collection of multiple time series of flow data at remote sites. Concurrently, flow measurements were made along bordering road culverts and under L-31W and Taylor Slough bridges. Flows across the study area's boundaries provided net flow of water into the system and transect measurements provided flow data within the basin. Collected data are available through the World Wide Web (http://sofia.usgs.gov/projects/flow_velocity/). The high-water and low-water events corresponded with the highest and lowest flow velocities, respectively. The July 1998 data had lower than expected flow velocities and, in some cases, strong winds reversed flow direction.

  11. Supplement Analysis for the Watershed Management Program EIS (DOE/EIS-0265/SA-155) - Blind Slough Restoration Project

    SciTech Connect

    Wittpenn, Nancy A.

    2004-07-09

    This project proposes to restore tidal connection between the Columbia River Estuary and Blind Slough through the replacement and/or installation of culverts, installation of water control devices, breaching of dikes, and channel enhancement. These enhancements would restore connectivity to approximately ten (10) miles of slough channels previously isolated from tidal influence due to dikes, road crossings, and constrained culverts.

  12. Stochastic modeling for characterisation of biofilm development with discrete detachment events (sloughing).

    PubMed

    Bohn, A; Zippel, B; Almeida, J S; Xavier, J B

    2007-01-01

    The monitoring of biofilm development at a small-scale is often observed to be a stochastic process. This raises important issues concerning the reproducibility of biofilm growth monitoring experiments. By realising that there are limits to the latter, a model of biofilm accumulation curves that takes into account the dynamics of seemingly random fluctuations resulting from sloughing events is proposed. The model is derived from a stochastic differential equation (SDE) based on the logistic equation, adding a stochastic term for the sloughing events and measurement noise. Experimental light absorbance data that correlate with biofilm biomass obtained from the development of phototrophic biofilms are analysed to illustrate the use of SDE modeling.

  13. Esophageal stenosis with sloughing esophagitis: A curious manifestation of graft-vs-host disease

    PubMed Central

    Trabulo, Daniel; Ferreira, Sara; Lage, Pedro; Rego, Rafaela Lima; Teixeira, Gilda; Pereira, A Dias

    2015-01-01

    We report a case of a 56-year-old woman with a history of allogenic bone marrow transplantation for two years, complaining with dysphagia and weight loss. Upper endoscopy revealed esophageal stenosis and extensive mucosa sloughing. Biopsies confirmed the diagnosis of graft-vs-host disease (GVHD). Balloon dilation, corticosteroids and cyclosporin resulted in marked clinical improvement. Gastrointestinal tract is involved in the majority of patients with chronic GVHD. Esophageal manifestations are rare and include vesiculobullous disease, ulceration, esophageal webs, casts or strictures. Sloughing esophagitis along with severe stenosis requiring endoscopic dilation has never been reported in this context. PMID:26290649

  14. 75 FR 35829 - Bear Lake National Wildlife Refuge, Oxford Slough Waterfowl Production Area, ID

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-06-23

    ... Fish and Wildlife Service Bear Lake National Wildlife Refuge, Oxford Slough Waterfowl Production Area... Environmental Policy Act (NEPA) documents for Bear Lake National Wildlife Refuge (NWR, Refuge), 7 miles south of... ``Bear Lake CCP EA'' in the subject line of the message. Fax: Attn: Annette de Knijf, 208-847-1319. U.S...

  15. 33 CFR 117.151 - Cordelia Slough (a tributary of Suisun Bay).

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ... 33 Navigation and Navigable Waters 1 2014-07-01 2014-07-01 false Cordelia Slough (a tributary of Suisun Bay). 117.151 Section 117.151 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY BRIDGES DRAWBRIDGE OPERATION REGULATIONS Specific Requirements California § 117.151...

  16. 78 FR 3910 - Hamden Slough National Wildlife Refuge, Becker County, MN; Final Comprehensive Conservation Plan...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2013-01-17

    ... National Wildlife Refuge (Refuge, NWR). In this final CCP, we describe how we intend to manage the refuge... Fish and Wildlife Service Hamden Slough National Wildlife Refuge, Becker County, MN; Final... and Wildlife Service, Interior. ACTION: Notice of availability. SUMMARY: We, the U.S. Fish and...

  17. Hydrodynamic Modeling Analysis of Union Slough Restoration Project in Snohomish River, Washington

    SciTech Connect

    Yang, Zhaoqing; Wang, Taiping

    2010-12-20

    A modeling study was conducted to evaluate additional project design scenarios at the Union Slough restoration/mitigation site during low tide and to provide recommendations for finish-grade elevations to achieve desired drainage. This was accomplished using the Snohomish River hydrodynamic model developed previously by PNNL.

  18. Hydrogeology, groundwater flow, and groundwater quality of an abandoned underground coal-mine aquifer, Elkhorn Area, West Virginia

    USGS Publications Warehouse

    Kozar, Mark D.; McCoy, Kurt J.; Britton, James Q.; Blake, B.M.

    2017-01-01

    The Pocahontas No. 3 coal seam in southern West Virginia has been extensively mined by underground methods since the 1880’s. An extensive network of abandoned mine entries in the Pocahontas No. 3 has since filled with good-quality water, which is pumped from wells or springs discharging from mine portals (adits), and used as a source of water for public supplies. This report presents results of a three-year investigation of the geology, hydrology, geochemistry, and groundwater flow processes within abandoned underground coal mines used as a source of water for public supply in the Elkhorn area, McDowell County, West Virginia. This study focused on large (> 500 gallon per minute) discharges from the abandoned mines used as public supplies near Elkhorn, West Virginia. Median recharge calculated from base-flow recession of streamflow at Johns Knob Branch and 12 other streamflow gaging stations in McDowell County was 9.1 inches per year. Using drainage area versus mean streamflow relationships from mined and unmined watersheds in McDowell County, the subsurface area along dip of the Pocahontas No. 3 coal-mine aquifer contributing flow to the Turkey Gap mine discharge was determined to be 7.62 square miles (mi2), almost 10 times larger than the 0.81 mi2 surface watershed. Results of this investigation indicate that groundwater flows down dip beneath surface drainage divides from areas up to six miles east in the adjacent Bluestone River watershed. A conceptual model was developed that consisted of a stacked sequence of perched aquifers, controlled by stress-relief and subsidence fractures, overlying a highly permeable abandoned underground coal-mine aquifer, capable of substantial interbasin transfer of water. Groundwater-flow directions are controlled by the dip of the Pocahontas No. 3 coal seam, the geometry of abandoned mine workings, and location of unmined barriers within that seam, rather than surface topography. Seven boreholes were drilled to intersect

  19. Biofilm detection by wound blotting can predict slough development in pressure ulcers: A prospective observational study.

    PubMed

    Nakagami, Gojiro; Schultz, Gregory; Gibson, Daniel J; Phillips, Priscilla; Kitamura, Aya; Minematsu, Takeo; Miyagaki, Tomomitsu; Hayashi, Akitatsu; Sasaki, Sanae; Sugama, Junko; Sanada, Hiromi

    2016-12-26

    Bacteria have been found to form multicellular aggregates which have collectively been termed "biofilms." It is hypothesized that biofilm formation is a means to protect bacterial cells including protection form the immune response of humans. This protective mechanism is believed to explain persistent chronic wound infections. At times, the biofilms are abundant enough to see, and remove by simple wiping. However, recent evidence has shown that the removal of these visible portions are not sufficient, and that biofilms can continue to form even with daily wiping. In this work, we tested an approach to detect the biofilms which are present after clinically wiping or sharp wound debridement. Our method is based on a variation of impression cytology in which a nitrocellulose membrane was used to collect surface biofilm components, which were then differentially stained. In this prospective study, members of an interdisciplinary pressure ulcer team at a university hospital tested our method's ability to predict the generation of wound slough in the week that followed each blotting. A total of 70 blots collected from 23 pressure ulcers produced 27 wounds negative for staining and 43 positive. In the negative blots 55.6% were found to have decreased wound slough, while 81.4% with positive staining had either increase or unchanged wound slough generation. These results lead to an odds ratio of positive blotting cases of 9.37 (95% confidence intervals: 2.47-35.5, p = 0.001) for slough formation; suggesting that the changes in wound slough formation can be predicted clinically using a non-invasive wound blotting method.

  20. Simulation of groundwater flow and effects of groundwater irrigation on stream base flow in the Elkhorn and Loup River Basins, Nebraska, 1895-2055-Phase Two

    USGS Publications Warehouse

    Stanton, Jennifer S.; Peterson, Steven M.; Fienen, Michael N.

    2010-01-01

    Regional groundwater-flow simulations for a 30,000-square-mile area of the High Plains aquifer, referred to collectively as the Elkhorn-Loup Model, were developed to predict the effects of groundwater irrigation on stream base flow in the Elkhorn and Loup River Basins, Nebraska. Simulations described the stream-aquifer system from predevelopment through 2005 [including predevelopment (pre-1895), early development (1895-1940), and historical development (1940 through 2005) conditions] and future hypothetical development conditions (2006 through 2033 or 2055). Predicted changes to stream base flow that resulted from simulated changes to groundwater irrigation will aid development of long-term strategies for management of hydrologically connected water supplies. The predevelopment through 2005 simulation was calibrated using an automated parameter-estimation method to optimize the fit to pre-1940 groundwater levels and base flows, 1945 through 2005 decadal groundwater-level changes, and 1940 through 2005 base flows. The calibration results of the pre-1940 period indicated that 81 percent of the simulated groundwater levels were within 30 feet of the measured water levels. The results did not indicate large areas of simulated groundwater levels that were biased too high or too low, indicating that the simulation generally captures the regional trends. Calibration results using 1945 through 2005 decadal groundwater-level changes indicated that a majority of the simulated groundwater-level changes were within 5 feet of the changes calculated from measured groundwater levels. Simulated groundwater-level rises generally were smaller than measured rises near surface-water irrigation districts. Simulated groundwater-level declines were larger than measured declines in several parts of the study area having large amounts of irrigated crops. Base-flow trends and volumes generally were reproduced by the simulation at most sites. Exceptions include downward trends of simulated

  1. Hydrologic controls on aperiodic spatial organization of the ridge-slough patterned landscape

    NASA Astrophysics Data System (ADS)

    Casey, Stephen T.; Cohen, Matthew J.; Acharya, Subodh; Kaplan, David A.; Jawitz, James W.

    2016-11-01

    A century of hydrologic modification has altered the physical and biological drivers of landscape processes in the Everglades (Florida, USA). Restoring the ridge-slough patterned landscape, a dominant feature of the historical system, is a priority but requires an understanding of pattern genesis and degradation mechanisms. Physical experiments to evaluate alternative pattern formation mechanisms are limited by the long timescales of peat accumulation and loss, necessitating model-based comparisons, where support for a particular mechanism is based on model replication of extant patterning and trajectories of degradation. However, multiple mechanisms yield a central feature of ridge-slough patterning (patch elongation in the direction of historical flow), limiting the utility of that characteristic for discriminating among alternatives. Using data from vegetation maps, we investigated the statistical features of ridge-slough spatial patterning (ridge density, patch perimeter, elongation, patch size distributions, and spatial periodicity) to establish more rigorous criteria for evaluating model performance and to inform controls on pattern variation across the contemporary system. Mean water depth explained significant variation in ridge density, total perimeter, and length : width ratios, illustrating an important pattern response to existing hydrologic gradients. Two independent analyses (2-D periodograms and patch size distributions) provide strong evidence against regular patterning, with the landscape exhibiting neither a characteristic wavelength nor a characteristic patch size, both of which are expected under conditions that produce regular patterns. Rather, landscape properties suggest robust scale-free patterning, indicating genesis from the coupled effects of local facilitation and a global negative feedback operating uniformly at the landscape scale. Critically, this challenges widespread invocation of scale-dependent negative feedbacks for explaining

  2. Geomorphic Classification and Evaluation of Channel Width and Emergent Sandbar Habitat Relations on the Lower Platte River, Nebraska

    USGS Publications Warehouse

    Elliott, Caroline M.

    2011-01-01

    This report presents a summary of geomorphic characteristics extracted from aerial imagery for three broad segments of the Lower Platte River. This report includes a summary of the longitudinal multivariate classification in Elliott and others (2009) and presents a new analysis of total channel width and habitat variables. Three segments on the lower 102.8 miles of the Lower Platte River are addressed in this report: the Loup River to the Elkhorn River (70 miles long), the Elkhorn River to Salt Creek (6.9 miles long), and Salt Creek to the Missouri River (25.9 miles long). The locations of these segments were determined by the locations of tributaries potentially significant to the hydrology or sediment supply of the Lower Platte River. This report summarizes channel characteristics as mapped from July 2006 aerial imagery including river width, valley width, channel curvature, and in-channel habitat features. In-channel habitat measurements were not made under consistent hydrologic conditions and must be considered general estimates of channel condition in late July 2006. Longitudinal patterns in these features are explored and are summarized in the context of the longitudinal multivariate classification in Elliott and others (2009) for the three Lower Platte River segments. Detailed descriptions of data collection and classification methods are described in Elliott and others (2009). Nesting data for the endangered interior least tern (Sternula antillarum) and threatened piping plover (Charadrius melodus) from 2006 through 2009 are examined within the context of the multivariate classification and Lower Platte River segments. The widest reaches of the Lower Platte River are located in the segment downstream from the Loup River to the Elkhorn River. This segment also has the widest valley and highest degree of braiding of the three segments and many large vegetated islands. The short segment of river between the Elkhorn River and Salt Creek has a fairly low valley

  3. Recent cattail expansion and possible relationships to water management: changes in Upper Taylor Slough (Everglades National Park, Florida, USA).

    PubMed

    Surratt, Donatto; Shinde, Dilip; Aumen, Nick

    2012-03-01

    Recent appearance of cattail (Typha domingensis) within a southern Everglades slough-Upper Taylor Slough (Everglades National Park)-suggests ecosystem eutrophication. We analyze water quality, nutrient enrichment, and water management operations as potential drivers of eutrophication in Upper Taylor Slough. Further, we attempt to determine why surface water phosphorus, a parameter used commonly to monitor ecosystem health in the Everglades, did not serve as an early warning for eutrophication, which has broader implication for other restoration efforts. We found that surface water total phosphorus concentrations generally were below a 0.01 mg L(-1) threshold determined to cause imbalances in flora and fauna, suggesting no ecosystem eutrophication. However, assessment of nutrient loads and loading rates suggest Upper Taylor Slough has experienced eutrophication and that continued total phosphorus loading through a point-source discharge was a major driver. These nutrient loads, combined with increases in hydroperiods, led to the expansion of cattail in Upper Taylor Slough. We recommend other metrics, such as nutrient loads, periphyton and arthropod community shifts, and sediment core analyses, for assessing ecosystem health. Monitoring surface water alone is not enough to indicate ecosystem stress.

  4. Habitat preferences of wintering shorebirds in a temporally changing environment: Western sandpipers in the San Francisco Bay estuary

    USGS Publications Warehouse

    Warnock, S.E.; Takekawa, John Y.

    1995-01-01

    We examined habitat preferences of 106 radio-marked Western Sandpipers (Calidris mauri) in the San Francisco Bay estuary during winter and spring at two scales: comparing proportions of habitats in their home range with habitats available in the study area (second-order selection), and comparing proportions of radio locations in different habitats with their availability in the home range (third-order selection). Daily and seasonal habitat preferences differed significantly as habitat availability changed temporally. Under second-order selection, Western Sandpipers preferred tidal sloughs and mud flats on winter low tides, and salt-pond levees at high tides. They preferred salt-pond levees and mud flats at low tides, and salt-pond levees at high tides under third-order selection. During the spring, their preferred habitats were drained and tidal salt ponds, and seasonal wetlands at high tide. At low tide, their preferred habitats were tidal sloughs and tidal salt ponds. Salt-marsh plains were the least preferred habitats during both seasons. Adults were more selective than juveniles in use of low tide habitats, but salt-pond levees were the most preferred habitats for both. Habitat preferences varied considerably when different estimates of habitat availability and use were used. If mud-flat habitats were measured as linear foraging areas along the tide line, the preference for those habitats increased from second to first. When second-order selection was estimated from radio locations rather than home ranges, the resulting composition was similar to third-order selection. Our results suggest that regional conservation plans that restore salt marshes for the benefit of endangered species must consider the effects of losing artificial salt-pond habitats, which are locally important for sandpipers.

  5. Benthic response to water quality and biotic pressures in lower south San Francisco Bay, Alviso Slough, and Coyote Creek

    USGS Publications Warehouse

    Parchaso, Francis; Thompson, Janet K.; Crauder, Jeff S.; Anduaga, Rosa I.; Pearson, Sarah A.

    2015-12-22

    Bivalve biomass is elevated in summer and fall relative to the spring and winter except in Artesian Slough, where bivalves did not establish a signifcant presence. Presence of certain species contributes to the prey value of the community to predators. Potamocorbula amurensis is a shallow-burrowing bivalve and hence is easy prey for bottom-feeding predators. In contrast, Macoma petalum is a deposit feeder and can burrow deeper into the substrate than Potamocorbula amurensis, making it harder to be preyed upon. The quantitative importance of such predator-prey relationships on phytoplankton dynamics requires further investigation. There were also more amphipods in the sloughs in March 2014; this group is another potential contributor to the benthic-pelagic biomass balance. There is no observed reason for Artesian Slough to have low bivalve biomass values and high amphipod abundances. 

  6. Base of the upper layer of the phase-three Elkhorn-Loup groundwater-flow model, north-central Nebraska

    USGS Publications Warehouse

    Stanton, Jennifer S.

    2013-01-01

    The Elkhorn and Loup Rivers in Nebraska provide water for irrigation, recreation, hydropower produc­tion, aquatic life, and municipal water systems for the Omaha and Lincoln metropolitan areas. Groundwater is another important resource in the region and is extracted primarily for agricultural irrigation. Water managers of the area are interested in balancing and sustaining the long-term uses of these essential surface-water and groundwater resources. Thus, a cooperative study was established in 2006 to compile reliable data describing hydrogeologic properties and water-budget components and to improve the understanding of stream-aquifer interactions in the Elkhorn and Loup River Basins. A groundwater-flow model was constructed as part of the first two phases of that study as a tool for under­standing the effect of groundwater pumpage on stream base flow and the effects of management strategies on hydrologically connected groundwater and surface-water supplies. The third phase of the study was implemented to gain additional geologic knowledge and update the ELM with enhanced water-budget information and refined discretization of the model grid and stress periods. As part of that effort, the ELM is being reconstructed to include two vertical model layers, whereas phase-one and phase-two simulations represented the aquifer system using one vertical model layer. This report presents a map of and methods for developing the elevation of the base of the upper model layer for the phase-three ELM. Digital geospatial data of elevation contours and geologic log sites used to esti­mate elevation contours are available as part of this report.

  7. Hydrostratigraphic interpretation of test-hole and surface geophysical data, Elkhorn and Loup River Basins, Nebraska, 2008 to 2011

    USGS Publications Warehouse

    Hobza, Christopher M.; Bedrosian, Paul A.; Bloss, Benjamin R.

    2012-01-01

    The Elkhorn-Loup Model (ELM) was begun in 2006 to understand the effect of various groundwater-management scenarios on surface-water resources. During phase one of the ELM study, a lack of subsurface geological information was identified as a data gap. Test holes drilled to the base of the aquifer in the ELM study area are spaced as much as 25 miles apart, especially in areas of the western Sand Hills. Given the variable character of the hydrostratigraphic units that compose the High Plains aquifer system, substantial variation in aquifer thickness and characteristics can exist between test holes. To improve the hydrogeologic understanding of the ELM study area, the U.S. Geological Survey, in cooperation with the Nebraska Department of Natural Resources, multiple Natural Resources Districts participating in the ELM study, and the University of Nebraska-Lincoln Conservation and Survey Division, described the subsurface lithology at six test holes drilled in 2010 and concurrently collected borehole geophysical data to identify the base of the High Plains aquifer system. A total of 124 time-domain electromagnetic (TDEM) soundings of resistivity were collected at and between selected test-hole locations during 2008-11 as a quick, non-invasive means of identifying the base of the High Plains aquifer system. Test-hole drilling and geophysical logging indicated the base-of-aquifer elevation was less variable in the central ELM area than in previously reported results from the western part of the ELM study area, where deeper paleochannels were eroded into the Brule Formation. In total, more than 435 test holes were examined and compared with the modeled-TDEM soundings. Even where present, individual stratigraphic units could not always be identified in modeled-TDEM sounding results if sufficient resistivity contrast was not evident; however, in general, the base of aquifer [top of the aquifer confining unit (ACU)] is one of the best-resolved results from the TDEM

  8. Interaction between ground water and surface water in Taylor Slough and vicinity, Everglades National Park, South Florida; study methods and appendixes

    USGS Publications Warehouse

    Harvey, Judson W.; Jackson, J.M.; Mooney, R.H.; Choi, Jungyill

    2000-01-01

    The data presented in this report are products of an investigation that quantified interactions between ground water and surface water in Taylor Slough in Everglades National Park. Determining the extent of hydrologic interactions between wetland surface water and ground water in Taylor Slough is important because the balance of freshwater flow in the lower part of the Slough is uncertain. Although freshwater flows through Taylor Slough are quite small in comparison to Shark Slough (the larger of the two major sloughs in Everglades National Park), flows through Taylor Slough are especially important to the ecology of estuarine mangrove embayments of northeastern Florida Bay. Also, wetland and ground- water interactions must be quantified if their role in affecting water quality is to be determined. In order to define basic hydrologic characteristics of the wetland, depth of wetland peat was mapped, and hydraulic conductivity and vertical hydraulic gradients in peat were determined. During specific time periods representing both wet and dry conditions in the area, the distribution of major ions, nutrients, and water stable isotopes throughout the slough were determined. The purpose of chemical measurements was to identify an environmental tracer could be used to quantify ground-water discharge.

  9. Successful Schoolyard Long-term Ecological Research: Studies of Deadman's Slough by Successive Classes of 4th Grade Students in Fairbanks, Alaska

    NASA Astrophysics Data System (ADS)

    Boone, R. D.; Kramer, R. A.; Sparrow, E. B.

    2004-12-01

    We report on an inquiry-based long-term study of Deadman's Slough by successive classes of fourth grade students at University Park Elementary School in Fairbanks, Alaska. Since 2000 successive classes of fourth graders have studied the ecology of Deadman's Slough, off the Chena River and located by the school. Students have focused on (1) identification of the fish, insects, other aquatic animals, and plants that live in the slough, (2) the life histories and seasonal changes of those plants and animals, (3) the physical characteristics of snow and the microclimate below the snowpack, and (4) the history of the slough and the origin of its unusual name. The students have made physical measurements at the slough, set up and maintained an aquarium with netted fish and other aquatic animals, made sketches of snowflake and ice patterns, and produced a large mural showing slough life. The work on the slough has been incorporated into the classroom curriculum throughout the year. Success of the Deadman's Slough project has been demonstrated by the effective inquiry-based teaching of basic science and math concepts, the appreciation the students have gained for the value of long-term scientific studies, and the pure excitement and enthusiasm for science sustained by the students through the year.

  10. 2011 Georgiana Slough non-physical barrier performance evaluation project report

    USGS Publications Warehouse

    Reeves, Ryan R.; McQuirk, Jacob; Ameri, Khalid; Perry, Russell W.; Romine, Jason G.; Liedtke, Theresa L.; Burau, Jon R.; Blake, Aaron R.; Fitzer, Chris; Smith, Natalie; Pagliughi, Steve; Johnston, Sam; Kumagai, Kevin; Cash, Kenneth

    2012-01-01

    Under the ESA, the National Marine Fisheries Service (NMFS) issued the 2009 Biological and Conference Opinion for the Long‐Term Operations of the Central Valley Project and State Water Project (BO) for Chinook salmon and other listed anadromous fish species (NMFS 2009). Reasonable and Prudent Alternative (RPA) Action IV.1.3 of the BO requires the California Department of Water Resources (DWR) and the U.S. Bureau of Reclamation (Reclamation) to consider engineering solutions to reduce the diversion of juvenile salmonids from the Sacramento River into the interior and south Delta. DWR implemented the 2011 Georgiana Slough NonPhysical Barrier (GSNPB) Study to test the effectiveness of using a non-physical barrier, referred to as a behavioral Bio-Acoustic Fish Fence (BAFF), that combines three stimuli to deter juvenile Chinook salmon from entering Georgiana Slough: sound, high-intensity modulated light (previously known as stroboscopic light), and a bubble curtain. This report presents the results of the experimental tests conducted in 2011.

  11. UHF RiverSonde observations of water surface velocity at Threemile Slough, California

    USGS Publications Warehouse

    Teague, C.C.; Barrick, D.E.; Lilleboe, P.M.; Cheng, R.T.; Ruhl, C.A.

    2005-01-01

    A UHF RiverSonde system, operating near 350 MHz, has been in operation at Threemile Slough in central California, USA since September 2004. The water in the slough is dominated by tidal effects, with flow reversals four times a day and a peak velocity of about 0.8 m/s in each direction. Water level and water velocity are continually measured by the U. S. Geological Survey at the experiment site. The velocity is measured every 15 minutes by an ultrasonic velocity meter (UVM) which determines the water velocity from two-way acoustic propagation time-difference measurements made across the channel. The RiverSonde also measures surface velocity every 15 minutes using radar resonant backscatter techniques. Velocity and water level data are retrieved through a radio data link and a wideband internet connection. Over a period of several months, the radar-derived mean surface velocity has been very highly correlated with the UVM index velocity several meters below the surface, with a coefficient of determination R2 of 0.976 and an RMS difference of less than 10 cm/s. The wind has a small but measurable effect on the velocities measured by both instruments. In addition to the mean surface velocity across the channel, the RiverSonde system provides an estimate of the cross-channel variation of the surface velocity. ?? 2005 IEEE.

  12. AmeriFlux US-Skr Shark River Slough (Tower SRS-6) Everglades

    DOE Data Explorer

    Barr, Jordan G. [Everglades National Park; Fuentes, Jose [Pennsylvania State University

    2016-01-01

    This is the AmeriFlux version of the carbon flux data for the site US-Skr Shark River Slough (Tower SRS-6) Everglades. Site Description - The Florida Everglades Shark River Slough Mangrove Forest site is located along the Shark River in the western region of Everglades National Park. Also referred to as site SRS6 of the Florida Coastal Everglades LTER program, freshwater in the mangrove riverine floods the forest floor under a meter of water twice per day. Transgressive discharge of freshwater from the Shark river follows annual rainfall distributions between the wet and dry seasons. Hurricane Wilma struck the site in October of 2005 causing significant damage. The tower was offline until the following October in order to continue temporally consistent measurements. In post-hurricane conditions, ecosystem respiration rates and solar irradiance transfer increased. 2007- 2008 measurements indicate that these factors led to an decline in both annual -NEE and daily NEE from pre-hurricane conditions in 2004-2005.

  13. Habitat automation

    NASA Technical Reports Server (NTRS)

    Swab, Rodney E.

    1992-01-01

    A habitat, on either the surface of the Moon or Mars, will be designed and built with the proven technologies of that day. These technologies will be mature and readily available to the habitat designer. We believe an acceleration of the normal pace of automation would allow a habitat to be safer and more easily maintained than would be the case otherwise. This document examines the operation of a habitat and describes elements of that operation which may benefit from an increased use of automation. Research topics within the automation realm are then defined and discussed with respect to the role they can have in the design of the habitat. Problems associated with the integration of advanced technologies into real-world projects at NASA are also addressed.

  14. Identifying Roads and Trains Under Canopy Using Lidar

    DTIC Science & Technology

    2007-09-01

    NAVAL POSTGRADUATE SCHOOL MONTEREY, CALIFORNIA THESIS Approved for public release; distribution is unlimited IDENTIFYING ROADS AND...identifying roads and trails hidden under dense jungle and forest canopies. The four analyzed regions include the Elkhorn Slough in Central California ...canopies. The four analyzed regions include the Elkhorn Slough in Central California (2005), Kahuku Training Area on the North side of Oahu Island in Hawaii

  15. 77 FR 59639 - Bear Lake National Wildlife Refuge, Bear Lake County, ID and Oxford Slough Waterfowl Production...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2012-09-28

    ..., Montpelier, ID 83254. Web site: http://www.fws.gov/bearlake/refuge_planning.html ; select ``Contact Us.'' In-Person Drop-off, Viewing or Pickup: You may drop off comments during regular business hours at Refuge.... Oxford Slough is the drainage for Oxford and Deep Creeks, as well as other streams and creeks in...

  16. 78 FR 33433 - Bear Lake National Wildlife Refuge, Bear Lake County, ID, and Oxford Slough Waterfowl Production...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2013-06-04

    ... Fish and Wildlife Service Bear Lake National Wildlife Refuge, Bear Lake County, ID, and Oxford Slough... Assessment (EA) for the Bear Lake National Wildlife Refuge (NWR, refuge), 7 miles south of Montpelier, Idaho... ``Bear Lake NWR CCP'' in the subject line of the message. U.S. Mail: Annette de Knijf, Refuge Manager...

  17. Assessment of the usefulness of semipermeable membrane devices for long-term watershed monitoring in an urban slough system

    USGS Publications Warehouse

    McCarthy, K.

    2006-01-01

    Semipermeable membrane devices (SPMDs) were deployed at eight sites within the Buffalo Slough, near Portland, Oregon, to (1) measure the spatial and seasonal distribution of dissolved polycyclic aromatic hydrocarbon (PAH) and organochlorine (OC) compounds in the slough, (2) assess the usefulness of SPMDs as a tool for investigating and monitoring hydrophobic compounds throughout the Columbia Slough system, and (3) evaluate the utility of SPMDs as a tool for measuring the long-term effects of watershed improvement activities. Data from the SPMDs revealed clear spatial and seasonal differences in water quality within the slough and indicate that for hydrophobic compounds, this time-integrated passive-sampling technique is a useful tool for long-term watershed monitoring. In addition, the data suggest that a spiking rate of 2-5 ??g/SPMD of permeability/performance reference compounds, including at least one compound that is not susceptible to photodegradation, may be optimum for the conditions encountered here. ?? Springer Science + Business Media, Inc. 2006.

  18. 75 FR 7289 - Boyer Chute National Wildlife Refuge, NE; Hamden Slough National Wildlife Refuge, MN; and Iowa...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-02-18

    ... Refuge, MN; and Iowa Wetland Management District, IA AGENCY: Fish and Wildlife Service, Interior... documents for the Boyer Chute and Hamden Slough National Wildlife Refuges (NWRs) and the Iowa Wetland... Wildlife Refuge, 26624 N. Tower Road, Detroit Lakes, MN 56501; 3. Attention: Refuge Manager, Iowa...

  19. Potential effects of increased ground-water pumpage on Barka Slough, San Antonio Creek valley, Santa Barbara County, California

    USGS Publications Warehouse

    Mallory, Michael J.

    1980-01-01

    Groundwater use in San Antonio Creek valley, Calif., is expected to increase significantly as result of a planned extensive agricultural development in the basin. This additional pumpage may cause significant stress on the groundwater system, particularly on the environmentally sensitive Barka Slough. Expectations of the developer are that about 6,640 acre-feet per year of consumptive groundwater use will be required to irrigate 2,500 acres of vineyards and 1,200 acres of truck-farmed vegetables. This represents an increase in net basin pumpage of about 60%. The developer plans to obtain this water from 12 large-diameter irrigation wells in the Harris Canyon area. Analysis of the potential drawdowns in the vicinity of Barka Slough, by using the Theis nonequilibrium formula, indicates that drawdowns would average 6 feet after 10 years of pumping and would eventually exceed 10 feet. Because the artesian head in the aquifer that supplies the slough is generally less than 3 feet above land surface, these declines would probably mean that the wetlands of Barka Slough would disappear. The effects of this particular agricultural development would be in addition to any decline caused by other increases in pumpage in the basin. (USGS)

  20. Recent Cattail Expansion and Possible Relationships to Water Management: Changes in Upper Taylor Slough (Everglades National Park, Florida, USA)

    NASA Astrophysics Data System (ADS)

    Surratt, Donatto; Shinde, Dilip; Aumen, Nick

    2012-03-01

    Recent appearance of cattail ( Typha domingensis) within a southern Everglades slough—Upper Taylor Slough (Everglades National Park)—suggests ecosystem eutrophication. We analyze water quality, nutrient enrichment, and water management operations as potential drivers of eutrophication in Upper Taylor Slough. Further, we attempt to determine why surface water phosphorus, a parameter used commonly to monitor ecosystem health in the Everglades, did not serve as an early warning for eutrophication, which has broader implication for other restoration efforts. We found that surface water total phosphorus concentrations generally were below a 0.01 mg L-1 threshold determined to cause imbalances in flora and fauna, suggesting no ecosystem eutrophication. However, assessment of nutrient loads and loading rates suggest Upper Taylor Slough has experienced eutrophication and that continued total phosphorus loading through a point-source discharge was a major driver. These nutrient loads, combined with increases in hydroperiods, led to the expansion of cattail in Upper Taylor Slough. We recommend other metrics, such as nutrient loads, periphyton and arthropod community shifts, and sediment core analyses, for assessing ecosystem health. Monitoring surface water alone is not enough to indicate ecosystem stress.

  1. Investigation of hydrophobic contaminants in an urban slough system using passive sampling - Insights from sampling rate calculations

    USGS Publications Warehouse

    McCarthy, K.

    2008-01-01

    Semipermeable membrane devices (SPMDs) were deployed in the Columbia Slough, near Portland, Oregon, on three separate occasions to measure the spatial and seasonal distribution of dissolved polycyclic aromatic hydrocarbons (PAHs) and organochlorine compounds (OCs) in the slough. Concentrations of PAHs and OCs in SPMDs showed spatial and seasonal differences among sites and indicated that unusually high flows in the spring of 2006 diluted the concentrations of many of the target contaminants. However, the same PAHs - pyrene, fluoranthene, and the alkylated homologues of phenanthrene, anthracene, and fluorene - and OCs - polychlorinated biphenyls, pentachloroanisole, chlorpyrifos, dieldrin, and the metabolites of dichlorodiphenyltrichloroethane (DDT) - predominated throughout the system during all three deployment periods. The data suggest that storm washoff may be a predominant source of PAHs in the slough but that OCs are ubiquitous, entering the slough by a variety of pathways. Comparison of SPMDs deployed on the stream bed with SPMDs deployed in the overlying water column suggests that even for the very hydrophobic compounds investigated, bed sediments may not be a predominant source in this system. Perdeuterated phenanthrene (phenanthrene-d10). spiked at a rate of 2 ??g per SPMD, was shown to be a reliable performance reference compound (PRC) under the conditions of these deployments. Post-deployment concentrations of the PRC revealed differences in sampling conditions among sites and between seasons, but indicate that for SPMDs deployed throughout the main slough channel, differences in sampling rates were small enough to make site-to-site comparisons of SPMD concentrations straightforward. ?? Springer Science+Business Media B.V. 2007.

  2. Degradation of MSCRAMM target macromolecules in VLU slough by Lucilia sericata chymotrypsin 1 (ISP) persists in the presence of tissue gelatinase activity.

    PubMed

    Pritchard, David I; Brown, Alan P

    2015-08-01

    Venous leg ulcer slough is unpleasant to the patient and difficult to manage clinically. It harbours infection, also preventing wound management materials and dressings from supporting the underlying viable tissues. In other words, slough has significant nuisance value in the tissue viability clinic. In this study, we have sought to increase our knowledge of slough by building upon a previous but limited analysis of this necrotic tissue. In particular, slough has been probed using Western blotting for the presence of proteins with the capacity to engage microbial surface components recognising adhesive matrix macromolecules. Although the samples were difficult to resolve, we detected fibrinogen, fibronectin, IgG, collagen, human serum albumin and matrix metalloproteinase-9. Furthermore, the effect of a maggot-derived debridement enzyme, chymotrypsin 1 on macromolecules in slough was confirmed across seven patient samples. The effect of chymotrypsin 1 on slough confirms our thesis that this potential debridement enzyme could be effective in removing slough along with its associated bacteria, given its observed resistance to intrinsic gelatinase activity. In summary, we believe that the data provide scientists and clinicians with further insights into the potential molecular interactions between bacteria, wound tissue and Lucilia sericata in a clinically problematic yet scientifically interesting wound ecosystem. © 2013 The Authors. International Wound Journal © 2013 Medicalhelplines.com Inc and John Wiley & Sons Ltd.

  3. Simulation of Ground-Water Flow and Effects of Ground-Water Irrigation on Base Flow in the Elkhorn and Loup River Basins, Nebraska

    USGS Publications Warehouse

    Peterson, Steven M.; Stanton, Jennifer S.; Saunders, Amanda T.; Bradley, Jesse R.

    2008-01-01

    Irrigated agriculture is vital to the livelihood of communities in the Elkhorn and Loup River Basins in Nebraska, and ground water is used to irrigate most of the cropland. Concerns about the sustainability of ground-water and surface-water resources have prompted State and regional agencies to evaluate the cumulative effects of ground-water irrigation in this area. To facilitate understanding of the effects of ground-water irrigation, a numerical computer model was developed to simulate ground-water flow and assess the effects of ground-water irrigation (including ground-water withdrawals, hereinafter referred to as pumpage, and enhanced recharge) on stream base flow. The study area covers approximately 30,800 square miles, and includes the Elkhorn River Basin upstream from Norfolk, Nebraska, and the Loup River Basin upstream from Columbus, Nebraska. The water-table aquifer consists of Quaternary-age sands and gravels and Tertiary-age silts, sands, and gravels. The simulation was constructed using one layer with 2-mile by 2-mile cell size. Simulations were constructed to represent the ground-water system before 1940 and from 1940 through 2005, and to simulate hypothetical conditions from 2006 through 2045 or 2055. The first simulation represents steady-state conditions of the system before anthropogenic effects, and then simulates the effects of early surface-water development activities and recharge of water leaking from canals during 1895 to 1940. The first simulation ends at 1940 because before that time, very little pumpage for irrigation occurred, but after that time it became increasingly commonplace. The pre-1940 simulation was calibrated against measured water levels and estimated long-term base flow, and the 1940 through 2005 simulation was calibrated against measured water-level changes and estimated long-term base flow. The calibrated 1940 through 2005 simulation was used as the basis for analyzing hypothetical scenarios to evaluate the effects of

  4. 76 FR 13427 - Ellicott Slough National Wildlife Refuge, Santa Cruz County, CA; Final Comprehensive Conservation...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-03-11

    ... ponds; develop habitat, mosquito, and water management plans, and a visitor services plan; improve... focused on mosquito control and listed species management. We incorporated comments we received into...

  5. Online assessment of biofilm development, sloughing and forced detachment in tube reactor by means of magnetic resonance microscopy.

    PubMed

    Wagner, Michael; Manz, Bertram; Volke, Frank; Neu, Thomas R; Horn, Harald

    2010-09-01

    Magnetic resonance microscopy (MRM) was successfully applied for non-invasive online monitoring of biofilm development, sloughing, and forced detachment. Biofilm cultivation was performed in a tube reactor directly placed in the MRM scanner. Based on the differences in relaxation time of free and bound protons, the distributed water signal was allocated to the bulk and the biofilm phase. The velocity of the flowing water in the tube reactor was measured in all three directions (x, y, and z) at spatial resolutions of 78 microm. From the velocity data, maps of flow gradients (shear rates) were derived. The experiments showed that a more compact biofilm structure is sloughed off in total with nearly no biomass left on the substratum. Continued biofilm cultivation resulted in filamentous biofilm structures, which did not show any sloughing. Experiments at higher Reynolds numbers were performed in order to force biofilm detachment. Continuous measuring of proton velocity and biomass was used to characterize the different stages of biofilm development. The measurements revealed that biofilms are able to resist extremely high local shear stress being raised up to factor of 20 compared to the mean local shear stress acting on the complete biofilm surface. The maximum local shear stress of single biofilm structures exposed to flow was found to be on average seven times higher compared to the mean local shear stress of the entire biofilm surface. MRM was able to visualize and quantify the development of biofilms and interaction of biofilms with the surrounding fluid at the meso-scale. It is suggested that detachment and sloughing depends on both internal and external structural parameters. 2010 Wiley Periodicals, Inc.

  6. WILDLIFE HABITAT

    EPA Science Inventory

    Habitat change statistics were used to estimate the effects of alternative future scenarios for agriculture on non-fish vertebrate diversity in Iowa farmlands. Study areas were two watersheds in central Iowa of about 50 and 90 square kilometers, respectively. Future scenarios w...

  7. WILDLIFE HABITAT

    EPA Science Inventory

    Habitat change statistics were used to estimate the effects of alternative future scenarios for agriculture on non-fish vertebrate diversity in Iowa farmlands. Study areas were two watersheds in central Iowa of about 50 and 90 square kilometers, respectively. Future scenarios w...

  8. Long-term UHF RiverSonde river velocity observations at Castle Rock, Washington and Threemile Slough, California

    USGS Publications Warehouse

    Teague, C.C.; Barrick, D.E.; Lilleboe, P.M.; Cheng, R.T.; Ruhl, C.A.

    2005-01-01

    Long-term, non-contact river velocity measurements have been made using a UHF RiverSonde system for several months at each of two locations having quite different flow characteristics. Observations were made on the Cowlitz River at Castle Rock, Washington from October 2003 to June 2004, where the unidirectional flow of the river ranged from about 1.0 to 3.5 m/s. The radar velocity was highly correlated with the stage height which was continually measured by the U. S. Geological Survey. The profile of the along-channel velocity across the water channel also compared favorably with in-situ measurements performed by the Survey. The RiverSonde was moved to Threemile Slough, in central California, in September 2004 and has been operating there for several months. At Threemile Slough, which connects the Sacramento and San Joaquin Rivers, the flow is dominated by tidal effects and reverses direction four times per day, with a maximum speed of about 0.8 m/s in each direction. Water level and water velocity are continually measured by the Survey at the Threemile Slough site, with velocity recorded every 15 minutes from measurements made by an ultrasonic velocity meter (UVM). Over a period of several months, the radar and UVM velocity measurements have been highly correlated, with a coefficient of determination R2 of 0.976. ??2005 IEEE.

  9. Recent and historic drivers of landscape change in the Everglades ridge, slough, and Tree Island mosaic

    USGS Publications Warehouse

    Larsen, Laurel G.; Nicholas Aumen,; Bernhardt, Christopher E.; Vic Engel,; Givnish, Thomas J.; S Hagerthey, P McCormick; Harvey, Judson; Lynn Leonard,; McCormick, P.; McVoy, Christopher; Noe, Gregory; Nungesser, Martha K.; Rutchey, K.; Sklar, Fred; Troxler, Tiffany G.; Volin, John C.; Willard, Debra A.

    2011-01-01

    More than half of the original Everglades extent formed a patterned peat mosaic of elevated ridges, lower and more open sloughs, and tree islands aligned parallel to the dominant flow direction. This ecologically important landscape structure remained in a dynamic equilibrium for millennia prior to rapid degradation over the past century in response to human manipulation of the hydrologic system. Restoration of the patterned landscape structure is one of the primary objectives of the Everglades restoration effort. Recent research has revealed that three main drivers regulated feedbacks that initiated and maintained landscape structure: the spatial and temporal distribution of surface water depths, surface and subsurface flow, and phosphorus supply. Causes of recent degradation include but are not limited to perturbations to these historically important controls; shifts in mineral and sulfate supply may have also contributed to degradation. Restoring predrainage hydrologic conditions will likely preserve remaining landscape pattern structure, provided a sufficient supply of surface water with low nutrient and low total dissolved solids content exists to maintain a rainfall-driven water chemistry. However, because of hysteresis in landscape evolution trajectories, restoration of areas with a fully degraded landscape could require additional human intervention.

  10. Mammals of Red Slough Wildlife Management Area, with comments on McCurtain County, Oklahoma

    USGS Publications Warehouse

    Roehrs, Zachary P.; Lack, Justin B.; Stanley, Craig E.; Seiden, Christopher J.; Bastarache, Robert; Arbour, W. David; Hamilton, Meredith J.; Leslie,, David M.; Van Den Bussche, Ronald A.

    2012-01-01

    Red Slough Wildlife Management Area (RSWMA) is located in the southeastern corner of Oklahoma, McCurtain County, and represents the extreme northwestern extent of the South Central Plains (SCP) ecoregion. Previous mammal research in southeastern Oklahoma has focused mostly on the Ouachita Mountains to the north of RSWMA. As a result, of the 69 species of mammals potentially occurring in McCurtain County, only 48 species represented by 599 voucher specimens reside in natural history collections. We present results from a mammal survey of RSWMA conducted from December 2009 to August 2010. We captured 574 non-volant small mammals in 9,115 trap-nights, 11 bats in 17 net-nights, and seven salvaged meso-mammals resulting in 157 voucher specimens of 22 mammal species, including the first specimen of Castor canadensis for McCurtain County, and photographic vouchers for eight additional species from RSWMA. These results provide a baseline for future studies on RSWMA and substantially increase our natural history knowledge for many relatively under-studied mammals in southeastern Oklahoma

  11. Recent and historic drivers of landscape change in the everglades ridge, Slough, and Tree Island Mosaic

    USGS Publications Warehouse

    Larsen, L.; Aumen, N.; Bernhardt, C.; Engel, V.; Givnish, T.; Hagerthey, S.; Harvey, J.; Leonard, L.; McCormick, P.; McVoy, C.; Noe, G.; Nungesser, M.; Rutchey, K.; Sklar, F.; Troxler, T.; Volin, J.; Willard, D.

    2011-01-01

    More than half of the original Everglades extent formed a patterned peat mosaic of elevated ridges, lower and more open sloughs, and tree islands aligned parallel to the dominant flow direction. This ecologically important landscape structure remained in a dynamic equilibrium for millennia prior to rapid degradation over the past century in response to human manipulation of the hydrologic system. Restoration of the patterned landscape structure is one of the primary objectives of the Everglades restoration effort. Recent research has revealed that three main drivers regulated feedbacks that initiated and maintained landscape structure: the spatial and temporal distribution of surface water depths, surface and subsurface flow, and phosphorus supply. Causes of recent degradation include but are not limited to perturbations to these historically important controls; shifts in mineral and sulfate supply may have also contributed to degradation. Restoring predrainage hydrologic conditions will likely preserve remaining landscape pattern structure, provided a sufficient supply of surface water with low nutrient and low total dissolved solids content exists to maintain a rainfall-driven water chemistry. However, because of hysteresis in landscape evolution trajectories, restoration of areas with a fully degraded landscape could require additional human intervention. Copyright ?? 2011 Taylor & Francis Group, LLC.

  12. Application of Wind Fetch and Wave Models for Habitat Rehabilitation and Enhancement Projects

    USGS Publications Warehouse

    Rohweder, Jason J.; Rogala, James T.; Johnson, Barry L.; Anderson, Dennis; Clark, Steve; Chamberlin, Ferris; Runyon, Kip

    2008-01-01

    Models based upon coastal engineering equations have been developed to quantify wind fetch length and several physical wave characteristics including significant height, length, peak period, maximum orbital velocity, and shear stress. These models, developed using Environmental Systems Research Institute's ArcGIS 9.2 Geographic Information System platform, were used to quantify differences in proposed island construction designs for three Habitat Rehabilitation and Enhancement Projects (HREPs) in the U.S. Army Corps of Engineers St. Paul District (Capoli Slough and Harpers Slough) and St. Louis District (Swan Lake). Weighted wind fetch was calculated using land cover data supplied by the Long Term Resource Monitoring Program (LTRMP) for each island design scenario for all three HREPs. Figures and graphs were created to depict the results of this analysis. The difference in weighted wind fetch from existing conditions to each potential future island design was calculated for Capoli and Harpers Slough HREPs. A simplistic method for calculating sediment suspension probability was also applied to the HREPs in the St. Paul District. This analysis involved determining the percentage of days that maximum orbital wave velocity calculated over the growing seasons of 2002-2007 exceeded a threshold value taken from the literature where fine unconsolidated sediments may become suspended. This analysis also evaluated the difference in sediment suspension probability from existing conditions to the potential island designs. Bathymetric data used in the analysis were collected from the LTRMP and wind direction and magnitude data were collected from the National Oceanic and Atmospheric Administration, National Climatic Data Center.

  13. Fecal indicator bacteria and Salmonella in ponds managed as bird habitat, San Francisco Bay, California, USA.

    PubMed

    Shellenbarger, Gregory G; Athearn, Nicole D; Takekawa, John Y; Boehm, Alexandria B

    2008-06-01

    Throughout the world, coastal resource managers are encouraging the restoration of previously modified coastal habitats back into wetlands and managed ponds for their ecosystem value. Because many coastal wetlands are adjacent to urban centers and waters used for human recreation, it is important to understand how wildlife can affect water quality. We measured fecal indicator bacteria (FIB) concentrations, presence/absence of Salmonella, bird abundance, and physico-chemical parameters in two coastal, managed ponds and adjacent sloughs for 4 weeks during the summer and winter in 2006. We characterized the microbial water quality in these waters relative to state water-quality standards and examined the relationship between FIB, bird abundance, and physico-chemical parameters. A box model approach was utilized to determine the net source or sink of FIB in the ponds during the study periods. FIB concentrations often exceeded state standards, particularly in the summer, and microbial water quality in the sloughs was generally lower than in ponds during both seasons. Specifically, the inflow of water from the sloughs to the ponds during the summer, more so than waterfowl use, appeared to increase the FIB concentrations in the ponds. The box model results suggested that the ponds served as net wetland sources and sinks for FIB, and high bird abundances in the winter likely contributed to net winter source terms for two of the three FIB in both ponds. Eight serovars of the human pathogen Salmonella were isolated from slough and pond waters, although the source of the pathogen to these wetlands was not identified. Thus, it appeared that factors other than bird abundance were most important in modulating FIB concentrations in these ponds.

  14. Fecal indicator bacteria and Salmonella in ponds managed as bird habitat, San Francisco Bay, California, USA

    USGS Publications Warehouse

    Shellenbarger, G.G.; Athearn, N.D.; Takekawa, John Y.; Boehm, A.B.

    2008-01-01

    Throughout the world, coastal resource managers are encouraging the restoration of previously modified coastal habitats back into wetlands and managed ponds for their ecosystem value. Because many coastal wetlands are adjacent to urban centers and waters used for human recreation, it is important to understand how wildlife can affect water quality. We measured fecal indicator bacteria (FIB) concentrations, presence/absence of Salmonella, bird abundance, and physico-chemical parameters in two coastal, managed ponds and adjacent sloughs for 4 weeks during the summer and winter in 2006. We characterized the microbial water quality in these waters relative to state water-quality standards and examined the relationship between FIB, bird abundance, and physico-chemical parameters. A box model approach was utilized to determine the net source or sink of FIB in the ponds during the study periods. FIB concentrations often exceeded state standards, particularly in the summer, and microbial water quality in the sloughs was generally lower than in ponds during both seasons. Specifically, the inflow of water from the sloughs to the ponds during the summer, more so than waterfowl use, appeared to increase the FIB concentrations in the ponds. The box model results suggested that the ponds served as net wetland sources and sinks for FIB, and high bird abundances in the winter likely contributed to net winter source terms for two of the three FIB in both ponds. Eight serovars of the human pathogen Salmonella were isolated from slough and pond waters, although the source of the pathogen to these wetlands was not identified. Thus, it appeared that factors other than bird abundance were most important in modulating FIB concentrations in these ponds.

  15. Standing crop and aboveground biomass partitioning of a dwarf mangrove forest in Taylor River Slough, Florida

    USGS Publications Warehouse

    Coronado-Molina, C.; Day, J.W.; Reyes, E.; Perez, B.C.

    2004-01-01

    The structure and standing crop biomass of a dwarf mangrove forest, located in the salinity transition zone ofTaylor River Slough in the Everglades National Park, were studied. Although the four mangrove species reported for Florida occurred at the study site, dwarf Rhizophora mangle trees dominated the forest. The structural characteristics of the mangrove forest were relatively simple: tree height varied from 0.9 to 1.2 meters, and tree density ranged from 7062 to 23 778 stems haa??1. An allometric relationship was developed to estimate leaf, branch, prop root, and total aboveground biomass of dwarf Rhizophora mangle trees. Total aboveground biomass and their components were best estimated as a power function of the crown area times number of prop roots as an independent variable (Y = B ?? Xa??0.5083). The allometric equation for each tree component was highly significant (p<0.0001), with all r2 values greater than 0.90. The allometric relationship was used to estimate total aboveground biomass that ranged from 7.9 to 23.2 ton haa??1. Rhizophora mangle contributed 85% of total standing crop biomass. Conocarpus erectus, Laguncularia racemosa, and Avicennia germinans contributed the remaining biomass. Average aboveground biomass allocation was 69% for prop roots, 25% for stem and branches, and 6% for leaves. This aboveground biomass partitioning pattern, which gives a major role to prop roots that have the potential to produce an extensive root system, may be an important biological strategy in response to low phosphorus availability and relatively reduced soils that characterize mangrove forests in South Florida.

  16. Schistosomula of Schistosoma mansoni clear concanavalin A from their surface by sloughing

    PubMed Central

    1982-01-01

    The lectin concanavalin A (Con A) was used as a model probe to study the behavior of molecules bound to the surface of recently transformed schistosomula of Schistosoma mansoni. Con A binding was saturable (150- 180 pg/organism) and specifically competed by alpha-methyl mannoside. Both FITC-Con A and 125-I-Con A were lost from the surface of schistosomula with a halftime of 8-10 h in culture in defined medium. A comparable decrease in the binding of Con A to schistosomula cultured and then labeled with the lectin indicated that the labeling procedure itself was not inducing the observed change. Internalization of Con A was not seen by either fluorescence microscopy or electron microscope radioautography. In addition, 70-80% of the radioactivity lost from the parasite was recoverable by TCA precipitation from the culture medium as intact Con A (27,000 mol wt on SDS PAGE). Thus, the mechanism of clearance of bound Con A from the surface of cultured schistosomula is apparently by sloughing of Con A molecules intact into the culture media and not by endocytosis and degradation. Con A binding sites, visualized with hemocyanin by scanning electron microscopy, appeared homogeneously distributed over the surface of schistosomula when organisms were labeled at 4 degree C or after fixation with glutaraldehyde. However, Con A and hemocyanin formed aggregates on the surface of schistosomula when labeling was performed at 37 degrees C, which suggests that lectin binding sites have lateral mobility within the plane of the membrane. These aggregates are likely independent of metabolism by the parasite because aggregation also occurs on the surface of organisms killed with azide. PMID:7107702

  17. Mars habitat

    NASA Technical Reports Server (NTRS)

    1991-01-01

    The College of Engineering & Architecture at Prairie View A&M University has been participating in the NASA/USRA Advanced Design Program since 1986. The interdisciplinary nature of the program allowed the involvement of students and faculty throughout the College of Engineering & Architecture for the last five years. The research goal for the 1990-1991 year is to design a human habitat on Mars that can be used as a permanent base for 20 crew members. The research is being conducted by undergraduate students from the Department of Architecture.

  18. Flow velocity, water temperature, and conductivity in Shark River Slough, Everglades National Park, Florida: June 2002-July 2003

    USGS Publications Warehouse

    Riscassi, Ami L.; Schaffranek, Raymond W.

    2004-01-01

    The data described in this report were collected in the U. S. Geological Survey (USGS) Priority Ecosystems Science project investigating Forcing Effects on Flow Structure in Vegetated Wetlands of the Everglades. Data collected at five locations in Shark River Slough, Everglades National Park, during the 2002-2003 wet season are documented in the report. Methods used to process the data are described. Daily mean flow velocities, water temperatures, and specific conductance values are presented in the appendices. The quality-checked and edited data have been compiled and stored on the USGS South Florida Information Access (SOFIA) website http://sofia.usgs.gov.

  19. Multielement chemical and statistical analyses from a uranium hydrogeochemical and stream-sediment survey in and near the Elkhorn Mountains, Jefferson County, Montana; Part I, Surface water

    USGS Publications Warehouse

    Suits, V.J.; Wenrich, K.J.

    1982-01-01

    Fifty-two surface-water samples, collected from an area south of Helena, Jefferson County, were analyzed for 51 chemical species. Of these variables, 35 showed detectable variation over the area, and 29 were utilized in a correlation analysis. Two populations are distinguished in the collected samples and are especially evident in the plot of Ca versus U. Samples separated on the basis of U versus Ca proved to represent drainage areas of two differing lithologies. One group was from waters that drain the Boulder batholith, the other from those that drain the Elkhorn Mountains volcanic rocks. These two groups of samples, in general, proved to have parallel but different linear trends between U and other elements. Therefore, the two groups of samples were treated separately in the statistical analyses. Over the area that drains the Boulder batholith, U concentrations in water ranged from 0.37 to 13.0 ?g/l , with a mean of 1.9 ?g/l. The samples from streams draining volcanic areas ranged from 0.04 to 1.5 ?g/l, with a mean of 0.42 ?g/l. The highest U values (12 and 13 ?g/l) occur along Badger Creek, Rawhide Creek, Little Buffalo Gulch, and an unnamed tributary to Clancy Creek. Conductivity, hardness, Ba, Ca, CI, K, Mg, Na and Sr are significantly correlated with U at or better than the 95 percent confidence limit in both populations. For water draining the Boulder batholith, uranium correlates significantly with akalinity, pH, bicarbonate, Li, Mo, NO2+NO3, P04, SiO2, SO4, F, and inorganic carbon. These correlations are similar to those found in a previous study of water samples in north-central New Mexico (Wenrich-Verbeek, 1977b). Uranium in water from the volcanic terrane does not show correlations with any of the above constituents, but does correlate well with V. This relationship with V is absent within the Boulder batholith samples.

  20. A method for reducing the sloughing of thick blood films for malaria diagnosis

    PubMed Central

    2013-01-01

    Background The gold standard for malaria diagnosis is the examination of thick and thin blood films. Thick films contain 10 to 20 times more blood than thin films, correspondingly providing increased sensitivity for malaria screening. A potential complication of thick film preparations is sloughing of the blood droplet from the slide during staining or rinsing, resulting in the loss of sample. In this work, two methods for improving thick film slide adherence (‘scratch’ (SCM) and ‘acetone dip’ (ADM) methods) were compared to the ‘standard method’ (SM) of thick film preparation. Methods Standardized blood droplets from 26 previously examined EDTA whole blood specimens (22 positive and four negative) were concurrently spread on glass slides using the SM, ADM, and SCM. For the SM and ADM prepared slides, the droplet was gently spread to an approximate 22 millimeters in diameter spot on the slide using the edge of a second glass slide. For the SCM, the droplet was spread by carefully grinding (or scratching) it into the slide with the point of a second glass slide. Slides were dried for one hour in a laminar flow hood. For the ADM, slides were dipped once in an acetone filled Coplin jar and allowed to air dry. All slides were then Giemsa-stained and examined in a blinded manner. Adherence was assessed by blinded reviewers. Results No significant or severe defects were observed for slides prepared with the SCM. In contrast, 8 slides prepared by the ADM and 3 prepared using the SM displayed significant or severe defects. Thick films prepared by the three methods were microscopically indistinguishable and concordant results (positive or negative) were obtained for the three methods. Estimated parasitaemia of the blood samples ranged from 25 to 429,169 parasites/μL of blood. Conclusions The SCM is an inexpensive, rapid, and simple method that improves the adherence of thick blood films to standard glass slides without altering general slide preparation

  1. Patterns of dissolved oxygen dynamics in a Pacific Northwest slough and tide channel - CERF 2015

    EPA Science Inventory

    Pacific Northwest (PNW) estuaries and tide channels are habitats or migratory corridors for societally prized salmonids. These fish have high oxygen requirements, and an adequate level of dissolved oxygen is considered an important gauge of a PNW water body’s condition. W...

  2. Patterns of dissolved oxygen dynamics in a Pacific Northwest slough and tide channel.

    EPA Science Inventory

    Pacific Northwest (PNW) estuaries and tide channels are habitats or migratory corridors for societally prized salmonids. These fish have high oxygen requirements, and an adequate level of dissolved oxygen is considered an important gauge of a PNW water body’s condition. W...

  3. Patterns of dissolved oxygen dynamics in a Pacific Northwest slough and tide channel - CERF 2015

    EPA Science Inventory

    Pacific Northwest (PNW) estuaries and tide channels are habitats or migratory corridors for societally prized salmonids. These fish have high oxygen requirements, and an adequate level of dissolved oxygen is considered an important gauge of a PNW water body’s condition. W...

  4. Patterns of dissolved oxygen dynamics in a Pacific Northwest slough and tide channel.

    EPA Science Inventory

    Pacific Northwest (PNW) estuaries and tide channels are habitats or migratory corridors for societally prized salmonids. These fish have high oxygen requirements, and an adequate level of dissolved oxygen is considered an important gauge of a PNW water body’s condition. W...

  5. 75 FR 61432 - Takes of Marine Mammals Incidental to Specified Activities; Construction of the Parsons Slough...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-10-05

    ... San Francisco and 20 miles (32 km) north of Monterey in Monterey County, California. The application... to widen tidal channels and convert salt marsh to mud flat. This would result in a significant loss of habitat function and a decrease in estuarine biodiversity. In order to reduce tidal scour,...

  6. The Habitat Connection.

    ERIC Educational Resources Information Center

    Naturescope, 1987

    1987-01-01

    Consists of activities which address the causes of habitat destruction and the effects of habitat loss on animals and plants. Identifies habitat loss as the major reason for the endangerment and extinction of plant and animal species. (ML)

  7. The Habitat Connection.

    ERIC Educational Resources Information Center

    Naturescope, 1987

    1987-01-01

    Consists of activities which address the causes of habitat destruction and the effects of habitat loss on animals and plants. Identifies habitat loss as the major reason for the endangerment and extinction of plant and animal species. (ML)

  8. A 2002-2008 hydrological budget and phosphorus residence times for Shark River Slough, Everglades National Park

    NASA Astrophysics Data System (ADS)

    Saha, A. K.; Price, R. M.; Fitz, H.; Engel, V.

    2010-12-01

    A monthly and annual water budget has been created for Shark River Slough (SRS) within the Everglades National Park (ENP) over 2002-2008. Inputs considered are surface water inflows via water delivery structures (S12s and S333) and precipitation, while outputs consist of evapotranspiration, discharge to the Gulf of Mexico (Lostman, Shark, Broad, Harney and North rivers) and seepage losses from the eastern part of the slough under levee L31. Using a mass balance approach, monthly change in volume of SRS (from water level changes) is equated to the sum of inputs, outputs and a residual term, that includes error in each of the inputs and outputs as well as net groundwater exchange. Results for 2002-2008 indicate that precipitation is the largest input to the SRS, while ET is the largest output, with ET being equal to or greater than precipitation. A net groundwater discharge to freshwater flow is predicted that is also lag correlated with surface water salinity by 1 month, thereby supporting earlier hydrological and geochemical findings of coastal groundwater discharge in the mangrove zone. The small quantity of inflows relative to precipitation and ET highlights the necessity of gradually increasing surface water inflows to restore ecosystem processes in terrestrial, freshwater and marine portions of the ENP. Water flow measurement data and the Ecological Landscape Model (ELM) is used in conjunction with Phosphorus concentration data to calculate phosphorus residence times in different parts of SRS that has been found to vary seasonally.

  9. Habitat Demonstration Unit - Deep Space Habitat Configuration

    NASA Image and Video Library

    This animated video shows the process of transporting, assembling and testing the Habitat Demonstration Unit - Deep Space Habitat (HDU DSH) configuration, which will be deployed during the 2011 Des...

  10. Lateral Mixing Processes in an Estuary: San Francisco Bay and its Exchange With Perimeter Habitat

    NASA Astrophysics Data System (ADS)

    MacVean, L. J.; Stacey, M. T.

    2008-12-01

    Observations from the South San Francisco Bay are presented to examine lateral mixing processes in an estuary. Irregularities in the shoreline lead to lateral density gradients that are set up by tidal trapping, which disrupts the phasing of flows and scalar concentrations along the estuary's axis. In South San Francisco Bay, thousands of acres of salt ponds are being breached to the Bay's influence for the first time in decades as part of a landscape-scale salt marsh restoration project. The tides deliver salt, sediment, and nutrients to the subsided ponds, aggrading their surfaces and converting them to marsh. These newly inter-tidal ponds around the perimeter of the South San Francisco Bay constitute a highly irregular shoreline, capable of initiating steep, periodic lateral density gradients. In this study, we focus on a small cluster of salt ponds and the tidal slough to which they were breached. The exchange between the tidal slough and the ponds is representative of the larger estuary, but of a spatial scale small enough that we can conduct field experiments to examine the flows and transport of scalars in detail. We conducted two boat-mounted transecting surveys of the tidal slough in June and July of 2008, during which we collected profiles of velocity with a down-looking 1200 kHz ADCP, continuous CTD measurements of surface water temperature and salinity, and discrete CTD profiles of salinity and temperature. We have observed that water and salt are trapped in the ponds on the flood tide, and released on the ebb out of phase with the slough's primary salinity gradient. Additionally, the momentum of the ebbing flow in the channel confines the pond effluent to the near bank just down-estuary of the breach. This leads to the coincidence of two distinct water masses, and a sharp change in salinity of 3 PSU over a distance less than 10 meters. We use our data to construct detailed velocity and density fields across and along the tidal slough as the lateral

  11. Microbial Origin and Transformation of Dissolved Organic Matter in the Agricultural Willow Slough Watershed, California: Insights From Amino Sugars

    NASA Astrophysics Data System (ADS)

    Journet, S.; Pellerin, B. A.; Bergamaschi, B. A.; Hernes, P. J.

    2007-12-01

    Understanding the fundamental processes and land management practices affecting dissolved organic matter (DOM) cycling in agricultural watersheds is essential for managing drinking water quality and maintaining ecosystem health. Although dissolved organic nitrogen (DON) is increasingly recognized as a key component of DOM in disturbed watersheds, our knowledge of its origin and reactivity are limited due to multiple sources, microbial uptake, and secondary production. In particular, the effect of microbial processes on DON dynamics remains poorly understood at the watershed scale. The seasonal and spatial variations of DON concentrations in the surface waters of the Willow Slough watershed, a 425-km2 agriculturally-dominated catchment in the northern Central Valley of California, USA, were monitored weekly at 8 locations since January 2006. Amino sugars are specific microbial biomarkers and their unique distribution among groups of microorganisms such as bacteria, fungi, and algae allows the distinction between different sources of DOM. Although mean annual DON concentrations were lower at the headwaters (0.18 mg/L) than the outlet (0.45 mg/L), DON constituted up to 90% of the total dissolved nitrogen (TDN) at the headwaters, compared to only 15% of the TDN at the watershed outlet. During winter baseflows, DON concentrations at the outlet were low (0.2 mg/L), while they increased to about 1.2 mg/L during winter storms. Remarkably, DON concentrations increased and remained high at 0.6 mg/L during the summer irrigation season. Preliminary data suggests that winter storm runoff and summer irrigation flows are dominated by DON of terrestrial origin, whereas periods of winter baseflow are mainly composed of algal-derived DON. The concentration of total dissolved amino sugars in the Willow Slough surface waters and the contribution of amino sugars to the DON pool (% DON-AS) will be used to evaluate DON composition and degradation state. In addition, molar ratios of four

  12. Flow Velocity, Water Temperature, and Conductivity in Shark River Slough, Everglades National Park, Florida: August 2001-June 2002

    USGS Publications Warehouse

    Riscassi, Ami L.; Schaffranek, Raymond W.

    2003-01-01

    The data-collection effort described in this report is in support of the U.S. Geological Survey (USGS) Place-Based Studies project investigating 'Forcing Effects on Flow Structure in Vegetated Wetlands of the Everglades.' Data collected at four locations in Shark River Slough, Everglades National Park, during the 2001-2002 wet season are documented in the report and methods used to process the data are described. Daily mean flow velocities, water temperatures, and specific conductance values are presented in the appendices of the report. The quality-checked and edited data have been compiled and stored on the USGS South Florida Information Access (SOFIA) website http://sofia.usgs.gov.

  13. White Feces Syndrome of Shrimp Arises from Transformation, Sloughing and Aggregation of Hepatopancreatic Microvilli into Vermiform Bodies Superficially Resembling Gregarines

    PubMed Central

    Sriurairatana, Siriporn; Boonyawiwat, Visanu; Gangnonngiw, Warachin; Laosutthipong, Chaowanee; Hiranchan, Jindanan; Flegel, Timothy W.

    2014-01-01

    Accompanying acute hepatopancreatic necrosis disease (AHPND) in cultivated Asian shrimp has been an increasing prevalence of vermiform, gregarine-like bodies within the shrimp hepatopancreas (HP) and midgut. In high quantity they result in white fecal strings and a phenomenon called white feces syndrome (WFS). Light microscopy (LM) of squash mounts and stained smears from fresh HP tissue revealed that the vermiform bodies are almost transparent with widths and diameters proportional to the HP tubule lumens in which they occur. Despite vermiform appearance, they show no cellular structure. At high magnification (LM with 40-100x objectives), they appear to consist of a thin, outer membrane enclosing a complex of thicker, inter-folded membranes. Transmission electron microscopy (TEM) revealed that the outer non-laminar membrane of the vermiform bodies bore no resemblance to a plasma membrane or to the outer layer of any known gregarine, other protozoan or metazoan. Sub-cellular organelles such as mitochondria, nuclei, endoplasmic reticulum and ribosomes were absent. The internal membranes had a tubular sub-structure and occasionally enclosed whole B-cells, sloughed from the HP tubule epithelium. These internal membranes were shown to arise from transformed microvilli that peeled away from HP tubule epithelial cells and then aggregated in the tubule lumen. Stripped of microvilli, the originating cells underwent lysis. By contrast, B-cells remained intact or were sloughed independently and whole from the tubule epithelium. When sometimes engulfed by the aggregated, transformed microvilli (ATM) they could be misinterpreted as cyst-like structures by light microscopy, contributing to gregarine-like appearance. The cause of ATM is currently unknown, but formation by loss of microvilli and subsequent cell lysis indicate that their formation is a pathological process. If sufficiently severe, they may retard shrimp growth and may predispose shrimp to opportunistic pathogens

  14. White feces syndrome of shrimp arises from transformation, sloughing and aggregation of hepatopancreatic microvilli into vermiform bodies superficially resembling gregarines.

    PubMed

    Sriurairatana, Siriporn; Boonyawiwat, Visanu; Gangnonngiw, Warachin; Laosutthipong, Chaowanee; Hiranchan, Jindanan; Flegel, Timothy W

    2014-01-01

    Accompanying acute hepatopancreatic necrosis disease (AHPND) in cultivated Asian shrimp has been an increasing prevalence of vermiform, gregarine-like bodies within the shrimp hepatopancreas (HP) and midgut. In high quantity they result in white fecal strings and a phenomenon called white feces syndrome (WFS). Light microscopy (LM) of squash mounts and stained smears from fresh HP tissue revealed that the vermiform bodies are almost transparent with widths and diameters proportional to the HP tubule lumens in which they occur. Despite vermiform appearance, they show no cellular structure. At high magnification (LM with 40-100x objectives), they appear to consist of a thin, outer membrane enclosing a complex of thicker, inter-folded membranes. Transmission electron microscopy (TEM) revealed that the outer non-laminar membrane of the vermiform bodies bore no resemblance to a plasma membrane or to the outer layer of any known gregarine, other protozoan or metazoan. Sub-cellular organelles such as mitochondria, nuclei, endoplasmic reticulum and ribosomes were absent. The internal membranes had a tubular sub-structure and occasionally enclosed whole B-cells, sloughed from the HP tubule epithelium. These internal membranes were shown to arise from transformed microvilli that peeled away from HP tubule epithelial cells and then aggregated in the tubule lumen. Stripped of microvilli, the originating cells underwent lysis. By contrast, B-cells remained intact or were sloughed independently and whole from the tubule epithelium. When sometimes engulfed by the aggregated, transformed microvilli (ATM) they could be misinterpreted as cyst-like structures by light microscopy, contributing to gregarine-like appearance. The cause of ATM is currently unknown, but formation by loss of microvilli and subsequent cell lysis indicate that their formation is a pathological process. If sufficiently severe, they may retard shrimp growth and may predispose shrimp to opportunistic pathogens

  15. Western habitats - Session summary

    USGS Publications Warehouse

    Titus, K.; Fuller, M.R.; Pendleton, Beth Giron

    1989-01-01

    Determining the status of all habitats in the nine western states considered in this symposium is a difficult task. The authors of habitat status papers commented that the diversity of habitat classification systems limited their ability to relate habitat status to raptors. Differences of scale, objectives and survey design have hindered integration of habitat classification methods used by land managers with the habitat relationships understood by wildlife biologists, but examples now exist for successful integration of these methods. We suggest that land managers and wildlife biologists use common survey and classification schemes so that data can be combined and that results will be applicable over broader areas.

  16. Application of Wind Fetch and Wave Models for Habitat Rehabilitation and Enhancement Projects

    USGS Publications Warehouse

    Rohweder, Jason J.; Rogala, James T.; Johnson, Barry L.; Anderson, Dennis; Clark, Steve; Chamberlin, Ferris

    2012-01-01

    Models based upon coastal engineering equations have been developed to quantify wind fetch length and several physical wave characteristics including significant height, length, peak period, maximum orbital velocity, and shear stress. These models were used to quantify differences in proposed island construction designs for three Habitat Rehabilitation and Enhancement Projects (HREPs) in the U.S. Army Corps of Engineers St. Paul District (Capoli Slough and Harpers Slough) and St. Louis District (Swan Lake). Weighted wind fetch was calculated using land cover data supplied by the Long Term Resource Monitoring Program (LTRMP) for each island design scenario for all three HREPs. Figures and graphs were created to depict the results of this analysis. The difference in weighted wind fetch from existing conditions to each potential future island design was calculated for Capoli and Harpers Slough HREPs. A simplistic method for calculating sediment suspension probability was also applied to the HREPs in the St. Paul District. This analysis involved determining the percentage of days that maximum orbital wave velocity calculated over the growing seasons of 2002–2007 exceeded a threshold value taken from the literature where fine unconsolidated sediments may become suspended. This analysis also evaluated the difference in sediment suspension probability from existing conditions to the potential island designs. Bathymetric data used in the analysis were collected from the LTRMP and wind direction and magnitude data were collected from the National Oceanic and Atmospheric Administration, National Climatic Data Center. These models are scheduled to be updated to operate using the most current Environmental Systems Research Institute ArcGIS Geographic Information System platform, and have several improvements implemented to wave calculations, data processing, and functions of the toolbox.

  17. Predictive Seagrass Habitat Model

    EPA Science Inventory

    Restoration of ecosystem services provided by seagrass habitats in estuaries requires a firm understanding of the modes of action of multiple interacting stressors including nutrients, climate change, coastal land-use change, and habitat modification. We explored the application...

  18. MODELING PHYSICAL HABITAT PARAMETERS

    EPA Science Inventory

    Salmonid populations can be affected by alterations in stream physical habitat. Fish productivity is determined by the stream's physical habitat structure ( channel form, substrate distribution, riparian vegetation), water quality, flow regime and inputs from the watershed (sedim...

  19. Plausible Martian Habitats

    NASA Image and Video Library

    2009-10-13

    Unfrozen brine in cryopegs and fracture networks provides habitats for the survival and growth of organisms both within and under frozen rocky materials on Earth and, by analogy, could provide habitats on Mars.

  20. ESTUARINE HABITAT RESTORATION

    SciTech Connect

    Thom, Ronald M.; Borde, Amy B.

    2015-09-01

    Restoring estuarine habitats generally means repairing damages caused by humans and natural forces. Because of the extensive human occupation, development, and use of coastal areas for centuries, the extensive estuarine habitats have been either destroyed or significantly impaired.

  1. Indicators: Physical Habitat Complexity

    EPA Pesticide Factsheets

    Physical habitat complexity measures the amount and variety of all types of cove at the water’s edge in lakes. In general, dense and varied shoreline habitat is able to support more diverse communities of aquatic life.

  2. MODELING PHYSICAL HABITAT PARAMETERS

    EPA Science Inventory

    Salmonid populations can be affected by alterations in stream physical habitat. Fish productivity is determined by the stream's physical habitat structure ( channel form, substrate distribution, riparian vegetation), water quality, flow regime and inputs from the watershed (sedim...

  3. Predictive Seagrass Habitat Model

    EPA Science Inventory

    Restoration of ecosystem services provided by seagrass habitats in estuaries requires a firm understanding of the modes of action of multiple interacting stressors including nutrients, climate change, coastal land-use change, and habitat modification. We explored the application...

  4. An Overview of Potential Ecological Consequences of Habitat Modification from Offshore Energy Structures

    NASA Astrophysics Data System (ADS)

    Schroeder, D. M.; Bull, A. S.

    2016-02-01

    In the future, offshore environments may host an increasing amount of energy infrastructure, including offshore wind and wave farms, ocean thermal conversion installations, and liquid natural gas terminals. Using studies compiled from offshore oil and gas facilities and other emplaced infrastructure around the world, we review the potential ecological consequences of prospective rigs-to-reefs programs. Offshore energy installations establish fixed, hard substrate in surface waters, where current flow is generally greater when compared to nearshore environments. Depending upon the biogeography, this can create productive habitat for filter-feeding sessile invertebrates and results in a thick biotic layer on the infrastructure. In some instances, non-indigenous species may prevail as the primary space-holders on the novel surface habitat. Through cleaning, storm activities, or simple sloughing, large amounts of organic material fall to the seabed, transforming soft sediments into extensive "shell mound" habitat. These novel surface and benthic habitats have been observed to act as nurseries for many fish species found offshore. If unconsolidated, soft sediments dominate the regional seafloor character, offshore energy installations may enhance the ecological connectivity of once isolated hard substrate habitats, and subsequently modify regional population dynamics of some marine species. Finally, we outline how the management of human activities such as fishing and shipping plays an important role in determining the magnitude and direction of potential ecological consequences, and suggest that coastal and marine spatial planning efforts will play an important role in the offshore environment.

  5. Urban Areas. Habitat Pac.

    ERIC Educational Resources Information Center

    Fish and Wildlife Service (Dept. of Interior), Washington, DC.

    The materials in this educational packet are designed for use with students in grades 4 through 7. They consist of an overview, teaching guides and student data sheets for three activities, and a poster. The overview discusses the city as an ecosystem, changing urban habitats, urban wildlife habitats, values of wildlife, habitat management, and…

  6. Biodiversity: Habitat Suitability

    EPA Science Inventory

    Habitat suitability quantifies the relationship between species and habitat, and is evaluated according to the species’ fitness (i.e. proportion of birth rate to death rate). Even though it might maximize evolutionary success, species are not always in habitat that optimizes fit...

  7. Biodiversity: Habitat Suitability

    EPA Science Inventory

    Habitat suitability quantifies the relationship between species and habitat, and is evaluated according to the species’ fitness (i.e. proportion of birth rate to death rate). Even though it might maximize evolutionary success, species are not always in habitat that optimizes fit...

  8. Water-quality monitoring for a pilot piling removal field evaluation, Coal Creek Slough, Washington, 2008-09

    USGS Publications Warehouse

    Nilsen, Elena B.; Alvarez, David A.

    2011-01-01

    Significant Findings Water and sediment quality monitoring was conducted before and after the removal of a piling field located in Coal Creek Slough near Longview, Washington. Passive chemical samplers and continuous water-quality monitoring instruments were deployed at the piling removal site, Coal Creek Slough Site 1 (CCS1), and at a comparison site, Coal Creek Slough Site 2 (CCS2), before (2008) and after (2009) piling removal. Surface and subsurface (core) sediment samples were collected before and after piling removal and were analyzed for grain size, organic carbon content, and chemicals of concern. Significant findings from this study include: * Phenanthrene was the only compound detected in wood piling samples analyzed for a large suite of semivolatile organic compounds and polycyclic aromatic hydrocarbons (PAHs). Metals potentially associated with wood treatment were detected in the wood piling samples at low concentrations. * Organic carbon was slightly lower in core samples from CCS1 in pre-removal (2008) and post-removal (2009) samples than in surface samples from both sites in both years. * Grain-size class distributions were relatively uniform between sites and years. * Thirty-four out of 110 chemicals of concern were detected in sediments. Eight of those detected were anthropogenic waste indicator (AWI) compounds, 18 were PAHs, 4 were sterols, and 4 were metals potentially associated with wood treatment. * Nearly all reported concentrations of chemicals of concern in sediments are qualified as estimates, primarily due to interferences in extracts resulting from complex sample matrices. Indole, perylene, and fluoranthene are reported without qualification for some of the samples, and the metals are reported without qualification for all samples. * The highest frequency of detection of chemicals of concern was seen in the pre-removal surface samples at both sites. * AWI compounds were detected less frequently and at lower concentrations during the post

  9. The airspace is habitat

    USGS Publications Warehouse

    Diehl, Robert H.

    2013-01-01

    A preconception concerning habitat persists and has gone unrecognized since use of the term first entered the lexicon of ecological and evolutionary biology many decades ago. Specifically, land and water are considered habitats, while the airspace is not. This might at first seem a reasonable, if unintended, demarcation, since years of education and personal experience as well as limits to perception predispose a traditional view of habitat. Nevertheless, the airspace satisfies the definition and functional role of a habitat, and its recognition as habitat may have implications for policy where expanding anthropogenic development of airspace could impact the conservation of species and subject parts of the airspace to formalized legal protection.

  10. Flow velocity, water temperature, and conductivity at selected locations in Shark River Slough, Everglades National Park, Florida; July 1999 - July 2003

    USGS Publications Warehouse

    Schaffranek, Raymond W.; Riscassi, Ami L.

    2005-01-01

    Flow-velocity, water-temperature, and conductivity data were collected at five locations in Shark River Slough, Everglades National Park (ENP), Florida, from 1999 to 2003. The data were collected as part of the U.S. Geological Survey Priority Ecosystems Science Initiative in support of the Comprehensive Everglades Restoration Plan. This report contains digital files and graphical plots of the processed, quality-checked, and edited data. Information pertinent to the locations and monitoring strategy also is presented.

  11. Riverine habitat dynamics

    USGS Publications Warehouse

    Jacobson, R.B.

    2013-01-01

    The physical habitat template is a fundamental influence on riverine ecosystem structure and function. Habitat dynamics refers to the variation in habitat through space and time as the result of varying discharge and varying geomorphology. Habitat dynamics can be assessed at spatial scales ranging from the grain (the smallest resolution at which an organism relates to its environment) to the extent (the broadest resolution inclusive of all space occupied during its life cycle). In addition to a potentially broad range of spatial scales, assessments of habitat dynamics may include dynamics of both occupied and nonoccupied habitat patches because of process interactions among patches. Temporal aspects of riverine habitat dynamics can be categorized into hydrodynamics and morphodynamics. Hydrodynamics refers to habitat variation that results from changes in discharge in the absence of significant change of channel morphology and at generally low sediment-transport rates. Hydrodynamic assessments are useful in cases of relatively high flow exceedance (percent of time a flow is equaled or exceeded) or high critical shear stress, conditions that are applicable in many studies of instream flows. Morphodynamics refers to habitat variation resulting from changes to substrate conditions or channel/floodplain morphology. Morphodynamic assessments are necessary when channel and floodplain boundary conditions have been significantly changed, generally by relatively rare flood events or in rivers with low critical shear stress. Morphodynamic habitat variation can be particularly important as disturbance mechanisms that mediate population growth or for providing conditions needed for reproduction, such as channel-migration events that erode cutbanks and provide new pointbar surfaces for germination of riparian trees. Understanding of habitat dynamics is increasing in importance as societal goals shift toward restoration of riverine ecosystems. Effective investment in restoration

  12. Stratification of habitats for identifying habitat selection by Merriam's turkeys

    Treesearch

    Mark A. Rumble; Stanley H. Anderson

    1992-01-01

    Habitat selection patterns of Merriam’s Turkeys were compared in hierarchical analyses of three levels of habitat stratification. Habitat descriptions in first-level analyses were based on dominant species of vegetation. Habitat descriptions in second-level analyses were based on dominant species of vegetation and overstory canopy cover. Habitat descriptions in third-...

  13. Surface Habitat Systems

    NASA Technical Reports Server (NTRS)

    Kennedy, Kriss J.

    2009-01-01

    The Surface Habitat Systems (SHS) Focused Investment Group (FIG) is part of the National Aeronautics and Space Administration (NASA) Johnson Space Center (JSC) effort to provide a focused direction and funding to the various projects that are working on human surface habitat designs and technologies for the planetary exploration missions. The overall SHS-FIG effort focuses on directing and guiding those projects that: 1) develop and demonstrate new surface habitat system concepts, innovations, and technologies to support human exploration missions, 2) improve environmental systems that interact with human habitats, 3) handle and emplace human surface habitats, and 4) focus on supporting humans living and working in habitats on planetary surfaces. The activity areas of the SHS FIG described herein are focused on the surface habitat project near-term objectives as described in this document. The SHS-FIG effort focuses on mitigating surface habitat risks (as identified by the Lunar Surface Systems Project Office (LSSPO) Surface Habitat Element Team; and concentrates on developing surface habitat technologies as identified in the FY08 gap analysis. The surface habitat gap assessment will be updated annually as the surface architecture and surface habitat definition continues to mature. These technologies are mapped to the SHS-FIG Strategic Development Roadmap. The Roadmap will bring to light the areas where additional innovative efforts are needed to support the development of habitat concepts and designs and the development of new technologies to support of the LSSPO Habitation Element development plan. Three specific areas of development that address Lunar Architecture Team (LAT)-2 and Constellation Architecture Team (CxAT) Lunar habitat design issues or risks will be focused on by the SHS-FIG. The SHS-FIG will establish four areas of development that will help the projects prepare in their planning for surface habitat systems development. Those development areas are

  14. Discharge competence and pattern formation in peatlands: a meta-ecosystem model of the Everglades ridge-slough landscape.

    PubMed

    Heffernan, James B; Watts, Danielle L; Cohen, Matthew J

    2013-01-01

    Regular landscape patterning arises from spatially-dependent feedbacks, and can undergo catastrophic loss in response to changing landscape drivers. The central Everglades (Florida, USA) historically exhibited regular, linear, flow-parallel orientation of high-elevation sawgrass ridges and low-elevation sloughs that has degraded due to hydrologic modification. In this study, we use a meta-ecosystem approach to model a mechanism for the establishment, persistence, and loss of this landscape. The discharge competence (or self-organizing canal) hypothesis assumes non-linear relationships between peat accretion and water depth, and describes flow-dependent feedbacks of microtopography on water depth. Closed-form model solutions demonstrate that 1) this mechanism can produce spontaneous divergence of local elevation; 2) divergent and homogenous states can exhibit global bi-stability; and 3) feedbacks that produce divergence act anisotropically. Thus, discharge competence and non-linear peat accretion dynamics may explain the establishment, persistence, and loss of landscape pattern, even in the absence of other spatial feedbacks. Our model provides specific, testable predictions that may allow discrimination between the self-organizing canal hypotheses and competing explanations. The potential for global bi-stability suggested by our model suggests that hydrologic restoration may not re-initiate spontaneous pattern establishment, particularly where distinct soil elevation modes have been lost. As a result, we recommend that management efforts should prioritize maintenance of historic hydroperiods in areas of conserved pattern over restoration of hydrologic regimes in degraded regions. This study illustrates the value of simple meta-ecosystem models for investigation of spatial processes.

  15. Discharge Competence and Pattern Formation in Peatlands: A Meta-Ecosystem Model of the Everglades Ridge-Slough Landscape

    PubMed Central

    Heffernan, James B.; Watts, Danielle L.; Cohen, Matthew J.

    2013-01-01

    Regular landscape patterning arises from spatially-dependent feedbacks, and can undergo catastrophic loss in response to changing landscape drivers. The central Everglades (Florida, USA) historically exhibited regular, linear, flow-parallel orientation of high-elevation sawgrass ridges and low-elevation sloughs that has degraded due to hydrologic modification. In this study, we use a meta-ecosystem approach to model a mechanism for the establishment, persistence, and loss of this landscape. The discharge competence (or self-organizing canal) hypothesis assumes non-linear relationships between peat accretion and water depth, and describes flow-dependent feedbacks of microtopography on water depth. Closed-form model solutions demonstrate that 1) this mechanism can produce spontaneous divergence of local elevation; 2) divergent and homogenous states can exhibit global bi-stability; and 3) feedbacks that produce divergence act anisotropically. Thus, discharge competence and non-linear peat accretion dynamics may explain the establishment, persistence, and loss of landscape pattern, even in the absence of other spatial feedbacks. Our model provides specific, testable predictions that may allow discrimination between the self-organizing canal hypotheses and competing explanations. The potential for global bi-stability suggested by our model suggests that hydrologic restoration may not re-initiate spontaneous pattern establishment, particularly where distinct soil elevation modes have been lost. As a result, we recommend that management efforts should prioritize maintenance of historic hydroperiods in areas of conserved pattern over restoration of hydrologic regimes in degraded regions. This study illustrates the value of simple meta-ecosystem models for investigation of spatial processes. PMID:23671708

  16. Advanced Plant Habitat (APH)

    NASA Technical Reports Server (NTRS)

    Richards, Stephanie E. (Compiler); Levine, Howard G.; Reed, David W.

    2016-01-01

    The Advanced Plant Habitat (APH) hardware will be a large growth volume plant habitat, capable of hosting multigenerational studies, in which environmental variables (e.g., temperature, relative humidity, carbon dioxide level light intensity and spectral quality) can be tracked and controlled in support of whole plant physiological testing and Bio-regenerative Life Support System investigations.

  17. Wildlife Habitat Evaluation Handbook.

    ERIC Educational Resources Information Center

    Neilson, Edward L., Jr.; Benson, Delwin E.

    The National 4-H Wildlife Invitational is a competitive event to teach youth about the fundamentals of wildlife management. Youth learn that management for wildlife means management of wildlife habitat and providing for the needs of wildlife. This handbook provides information about wildlife habitat management concepts in both urban and rural…

  18. The Habitat Project

    ERIC Educational Resources Information Center

    Hein, Annamae J.

    2011-01-01

    The Habitat Project is a multiday, differentiated, interdisciplinary environmental science lesson that incorporates skill-building and motivational strategies to internalize ecosystem vocabulary. Middle school students research an animal, display its physical characteristics on a poster, build a three-dimensional habitat and present their work…

  19. Wildlife habitat considerations

    Treesearch

    Helen Y. Smith

    2000-01-01

    Fire, insects, disease, harvesting, and precommercial thinning all create mosaics on Northern Rocky Mountain landscapes. These mosaics are important for faunal habitat. Consequently, changes such as created openings or an increase in heavily stocked areas affect the water, cover, and food of forest habitats. The “no action” alternative in ecosystem management of low...

  20. Schoolyard Habitat Project Guide.

    ERIC Educational Resources Information Center

    Mason, Rich

    This project aims to provide basic steps for students to restore and create wildlife habitats on school grounds. Four chapters are included in this guide, and each chapter is divided into teacher and student sections. Chapter 1 provides necessary information for starting a habitat project. Chapters 2, 3, and 4 discuss the details for the Forest…

  1. The Habitat Project

    ERIC Educational Resources Information Center

    Hein, Annamae J.

    2011-01-01

    The Habitat Project is a multiday, differentiated, interdisciplinary environmental science lesson that incorporates skill-building and motivational strategies to internalize ecosystem vocabulary. Middle school students research an animal, display its physical characteristics on a poster, build a three-dimensional habitat and present their work…

  2. Detroit River habitat inventory

    USGS Publications Warehouse

    Manny, Bruce A.

    2003-01-01

    This inventory complements a previous survey of habitat in Ontario waters of the Detroit River (OMNR,1993). It is a starting point for balanced and sustained use of the river for natural resource conservation and economic development. The objectives of the inventory were to: (1) locate candidate sites for protection and restoration of fish and wildlife habitat in Michigan waters of the Detroit River; (2) describe the ownership and size of each site, as well as its potential for habitat protection and restoration; and (3) subjectively assess the extent to which existing habitat along the river is productive of fish and wildlife and protected from land uses that have degraded or destroyed such habitat.

  3. Contrasting patterns of habitat use by prawns and crayfish in a headwater marsh of the St. Johns River, Florida

    USGS Publications Warehouse

    Jordan, Frank; Babbitt, Kimberly J.; McIvor, Carole C.; Miller, Steven J.

    2000-01-01

    We compared seasonal patterns of habitat use by the prawn Palaemonetes paludosus and the crayfish Procambarus alleni in Blue Cypress Marsh Conservation Area, Florida. Prawn densities were similar to those found in other oligotrophic wetlands of southern Florida, whereas crayfish densities were much greater than reported previously for other wetlands in the area. Prawns and crayfish had strikingly different patterns of habitat use. Prawn density and biomass were similar in wet prairies and sloughs, whereas crayfish density and biomass were significantly higher in wet prairies. Within habitats, the abundance of prawns and crayfish generally increased with increasing structural complexity and the abundance of crayfish generally decreased with increasing water depth. Differences in risk of predation, frequency of agonistic encounters, food availability, and other factors likely contributed to observed patterns of habitat use. Because of differences in their ability to burrow and avoid concentration into dry-season refugia, prawns and crayfish responded very differently to seasonal variation in hydrologic conditions. Prawn densities were initially low (following a severe drought) and then increased during much of the study period, whereas crayfish densities were relatively stable throughout the study period. Overall, it appears that prawns are more responsive to antecedent hydrologic conditions and crayfish are more responsive to the availability of suitable habitats such as wet prairies.

  4. Flow-Velocity, Water-Temperature and Conductivity Data Collected in Shark River Slough, Everglades National Park, During 1999-2000 and 2000-2001 Wet Seasons

    USGS Publications Warehouse

    Riscassi, Ami L.; Schaffranek, R.W.

    2002-01-01

    A project within the U. S. Geological Survey Place- Based Studies Program is focused on investigation of ?Forcing Effects on Flow Structure in Vegetated Wetlands of the Everglades.? Data-collection efforts conducted within this project at three locations in Shark River Slough, Everglades National Park, during the 1999-2000 and 2000-2001 wet seasons are described in this report. Techniques for collecting and processing the data and summaries of daily mean flowvelocity, water-temperature, and conductivity data are presented. The quality-checked and edited data have been compiled and stored on the USGS South Florida Information Access website.

  5. Habitat Demonstration Unit (HDU) Vertical Cylinder Habitat

    NASA Technical Reports Server (NTRS)

    Howe, Alan; Kennedy, Kriss J.; Gill, Tracy R.; Tri, Terry O.; Toups, Larry; Howard, Robert I.; Spexarth, Gary R.; Cavanaugh, Stephen; Langford, William M.; Dorsey, John T.

    2014-01-01

    NASA's Constellation Architecture Team defined an outpost scenario optimized for intensive mobility that uses small, highly mobile pressurized rovers supported by portable habitat modules that can be carried between locations of interest on the lunar surface. A compact vertical cylinder characterizes the habitat concept, where the large diameter maximizes usable flat floor area optimized for a gravity environment and allows for efficient internal layout. The module was sized to fit into payload fairings for the Constellation Ares V launch vehicle, and optimized for surface transport carried by the All-Terrain Hex-Limbed Extra-Terrestrial Explorer (ATHLETE) mobility system. Launch and other loads are carried through the barrel to a top and bottom truss that interfaces with a structural support unit (SSU). The SSU contains self-leveling feet and docking interfaces for Tri-ATHLETE grasping and heavy lift. A pressurized module needed to be created that was appropriate for the lunar environment, could be easily relocated to new locations, and could be docked together in multiples for expanding pressurized volume in a lunar outpost. It was determined that horizontally oriented pressure vessels did not optimize floor area, which takes advantage of the gravity vector for full use. Hybrid hard-inflatable habitats added an unproven degree of complexity that may eventually be worked out. Other versions of vertically oriented pressure vessels were either too big, bulky, or did not optimize floor area. The purpose of the HDU vertical habitat module is to provide pressurized units that can be docked together in a modular way for lunar outpost pressurized volume expansion, and allow for other vehicles, rovers, and modules to be attached to the outpost to allow for IVA (intra-vehicular activity) transfer between them. The module is a vertically oriented cylinder with a large radius to allow for maximal floor area and use of volume. The modular, 5- m-diameter HDU vertical habitat

  6. Apparent Resistivity and Estimated Interaction Potential of Surface Water and Groundwater along Selected Canals and Streams in the Elkhorn-Loup Model Study Area, North-Central Nebraska, 2006-07

    USGS Publications Warehouse

    Teeple, Andrew; Vrabel, Joseph; Kress, Wade H.; Cannia, James C.

    2009-01-01

    In 2005, the State of Nebraska adopted new legislation that in part requires local Natural Resources Districts to include the effect of groundwater use on surface-water systems in their groundwater management plan. In response the U.S. Geological Survey, in cooperation with the Upper Elkhorn, Lower Elkhorn, Upper Loup, Lower Loup, Middle Niobrara, Lower Niobrara, Lewis and Clark, and Lower Platte North Natural Resources Districts, did a study during 2006-07 to investigate the surface-water and groundwater interaction within a 79,800-square-kilometer area in north-central Nebraska. To determine how streambed materials affect surface-water and groundwater interaction, surface geophysical and lithologic data were integrated at four sites to characterize the hydrogeologic conditions within the study area. Frequency-domain electromagnetic and waterborne direct- current resistivity profiles were collected to map the near-surface hydrogeologic conditions along sections of Ainsworth Canal near Ainsworth, Nebraska; Mirdan and Geranium Canals near Ord, Nebraska; North Loup River near Ord, Nebraska; and Middle Loup River near Thedford, Nebraska. Lithologic data were collected from test holes at each site to aid interpretation of the geophysical data. Geostatistical analysis incorporating the spatial variability of resistivity was used to account for the effect of lithologic heterogeneity on effective hydraulic permeability. The geostatistical analysis and lithologic data descriptions were used to make an interpretation of the hydrogeologic system and derive estimates of surface-water/groundwater interaction potential within the canals and streambeds. The estimated interaction potential at the Ainsworth Canal site and the Mirdan and Geranium Canal site is generally low to moderately low. The sediment textures at nearby test holes typically were silt and clay and fine-to-medium sand. The apparent resistivity values for these sites ranged from 2 to 120 ohm-meters. The vertical

  7. Effects of the El Mayor Cucapah April 4, 2010 earthquake and water management decisions on the Colorado River Delta tidal inundation patterns: implications for shorebirds habitat availability

    NASA Astrophysics Data System (ADS)

    Gomez-Sapiens, M.; Flessa, K. W.; Glenn, E. P.; Nelson, S. M.

    2010-12-01

    The Upper Gulf of California and Colorado River Delta (CRD) provide feeding and resting areas for migratory and resident shorebirds. Coastal and inland wetlands create a variety of habitats that support 31 shorebird species. Total shorebirds during the winter and spring migration ranges from 56,156 to 195,073. The Cienega de Santa Clara is an artificial wetland that receives saline water inflows from the United States, and the southeastern portion (the Santa Clara Slough) receives a mix of brackish effluent from the Cienega and occasional tidal inundation during extreme high tides. This transitional wetland between the sea and the land is one of the main shorebird aggregation areas within the CRD, supporting 29 to 75% of the individuals using the entire Upper Gulf and CRD. The Cienega de Santa Clara is currently experiencing a 30% reduction in inflows due to operation of the Yuma Desalting Plant in the United States. The 2010 Baja California earthquake caused changes in the tidal water inflows patterns in the delta. Time sequence Landsat images and aerial observations showed that a new wetland area has been created since tidal water inflows are now diverted from the southeast edge of the Cienega to the southwest areas due to subsidence effects. The aim of this study was to document the changes in the shorebird inland habitats to predict shifts in shorebird habitat use by using aerial and ground surveys before and after the earthquake. Preliminary results shows that some of the areas with a high density of shorebird use has dried out mainly as a consequence of the reduction in water inflows to the Cienega from the United States and diversion of water from the Santa Clara Slough to the new tidal basins northwest of the Slough. Aerial surveys suggest that shorebirds were not yet visiting the new wetland area during the past spring migration and were more abundant over the San Felipe coastline and Montague Island. Shorebird habitat has been influenced by a combination

  8. Landscape habitat suitability index software

    Treesearch

    William D. Dijak; Chadwick D. Rittenhouse; Michael A. Larson; Frank R. III Thompson; Joshua J. Millspaugh

    2007-01-01

    Habitat suitability index (HSI) models are traditionally used to evaluate habitat quality for wildlife at a local scale. Rarely have such models incorporated spatial relationships of habitat components. We introduce Landscape HSImodels, a new Microsoft Windowst (Microsoft, Redmond, WA)-based program that incorporates local habitat as well as landscape-scale attributes...

  9. Principles of wildlife habitat management

    Treesearch

    Ernie P. Wiggers

    1989-01-01

    Simply stated, habitat is where an animal lives and must include all the resources an animal needs to survive and reproduce. An animal's habitat has to provide five essential factors: food, cover, water, space, and interspersion. Habitat management is identifying which factors are scarce enough to limit populations, and then improving the habitat to remove the...

  10. Habitat Suitability Index Models: Fallfish

    USGS Publications Warehouse

    Trial, Joan G.; Wade, Charles S.; Stanley, Jon G.; Nelson, Patrick C.

    1983-01-01

    A review and synthesis of existing information were used to develop riverine and lacustrine habitat models for fallfish (Semotilis corporalis), a freshwater species. The models are scaled to produce an index of habitat suitability between 0 (unsuitable habitat) to 1 (optimally suitable habitat) for freshwater, marine and estuarine areas of the continental United States. Habitat suitability indexes (HSI's) are designed for use with the habitat evaluation procedures developed by the U.S. Fish and Wildlife Service. Also included are discussions of Suitability Index (SI) curves as used in the Instream Flow Incremental Methodology (IFIM) and SI curves available for an IFIM analysis of Fallfish habitat.

  11. Habitat Suitability Index Models: Bullfrog

    USGS Publications Warehouse

    Graves, Brent M.; Anderson, Stanley H.

    1987-01-01

    A review and synthesis of existing information were used to develop a Habitat Suitability Index (HSI) model for the bullfrog (Rana catesbeiana). The model consolidates habitat use information into a framework appropriate for field application, and is scaled to produce an index between 0.0 (unsuitable habitat) to 1.0 (optimum habitat). HSI models are designed to be used with Habitat Evaluation Procedures previously developed by the U.S. Fish and Wildlife Service.

  12. Habitat Suitability Index Models: Bobcat

    USGS Publications Warehouse

    Boyle, Katherine A.; Fendley, Timothy T.

    1987-01-01

    A review and synthesis of existing information were used to develop a Habitat Suitability Index (HSI) model for the bobcat (Felis rufus). The model consolidates habitat use information into a framework appropriate for field application, and is scaled to produce an index between 0.0 (unsuitable habitat) to 1.0 (optimum habitat). HSI models are designed to be used with Habitat Evaluation Procedures previously developed by the U.S. Fish and Wildlife Service.

  13. Habitat Suitability Index Models: Pronghorn

    USGS Publications Warehouse

    Allen, Arthur W.; Cook, John G.; Armbruster, Michael J.

    1984-01-01

    This is one of a series of publications that provide information on the habitat requirements of selected fish and wildlife species. Literature describing the relationship between habitat variables related to life requisites and habitat suitability for the pronghorn (Antilocapra americana) are synthesized. These data are subsequently used to develop Habitat Suitability Index (HSI) models. The HSI models are designed to provide information that can be used in impact assessment and habitat management.

  14. Habitat Suitability Index Models: Osprey

    USGS Publications Warehouse

    Vana-Miller, Sandra L.

    1987-01-01

    A review and synthesis of existing information were used to develop a Habitat Suitability Index (HSI) model for the osprey (Pandion haliaetus). The model consolidates habitat use information into a framework appropriate for field application, and is scaled to produce an index between 0.0 (unsuitable habitat) to 1.0 (optimum habitat). HSI models are designed to be used with Habitat Evaluation Procedures previously developed by the U.S. Fish and Wildlife Service.

  15. Postfledging Forster's Tern movements, habitat selection, and colony attendance in San Francisco Bay

    USGS Publications Warehouse

    Ackerman, J.T.; Bluso-Demers, Jill D.; Takekawa, J.Y.

    2009-01-01

    Relatively little is known about birds during the postfledging period when flighted chicks have left the nest and must learn to forage independently. We examined postfledging movements, habitat selection, and colony attendance of Forster's Terns (Sterna forsteri) radio-marked just before they fledged in San Francisco Bay, California. The proportion of the day spent at their natal colony declined as juveniles aged, from 65% at the time of fledging to <5% within two weeks of fledging. Accordingly, the distance postfledging terns were located from their colony increased as they aged, from <500 m within the first week of fledging to >5000 m by their fifth week. Time of day also influenced colony attendance, with older terns spending more time at the colony during nighttime hours (20:00 to 05:00) than during the day (06:00 to 19:00), when they were presumably foraging. Home ranges and core-use areas averaged 12.14 km2 and 2.23 km2, respectively. At each of four spatial scales of analysis, postfledging terns selected salt pond habitats strongly. No other habitat types were selected at any scale, but terns consistently avoided tidal flats and uplands. Terns also avoided open bay habitats at the two largest spatial scales, tidal marsh habitats at the two smallest scales, and sloughs and managed marshes at several scales. Within salt ponds, terns were located closer to salt-pond levees (58 m) than was expected (107 m). Our results indicate that tern chicks disperse from their natal colony within a few weeks of fledging, with older chicks using their natal colony primarily for roosting during the night, and that postfledging terns are highly dependent on salt ponds. ?? 2009 by The Cooper Ornithological Society. All rights reserved.

  16. Habitat goes green

    SciTech Connect

    Kriescher, P.; Smith, M.

    1999-12-01

    A Denver family enjoys the financial and personal benefits of owning an affordable, energy-efficient home. On Earth Day, April 22, 1997, Habitat for Humanity of Metro Denver witnessed the realization of a dream. As Luis and Estella Valadez and their four children cut the ribbon on their 1,100 square foot (102 m{sup 2}) northwest Denver home, it signified the completion of the Denver Habitat affiliate's first ``Green'' home. Building this dream involved developing a plan to build affordable Habitat homes that also embodied a sense of stewardship of the Earth's environment. The affiliate also wanted to use this effort to achieve the additional goal of reducing the homeowner's utility and maintenance bills.

  17. Terrrestrialization of isolated habitats

    NASA Astrophysics Data System (ADS)

    Kolodziejczyk, Agata; Harasymczuk, Matt; Foing, Bernard

    2017-04-01

    One of the most prominent issue for habitability of the solar system and beyond is to adjust a habitat for human life. Since the human life adapted to terrestrial environment during millions of years of evolution, terrestrialization of the base should be a natural trend strictly applied in habitat design. We discuss basic concerns about introducing biomimetic backup safety solutions such modularity, circularity, autonomy and plasticity into life support systems. Particularly we describe critical life processes such briefing, drinking, eating, homeostatic regulation, activity and sleep, in relation to symbiosis and competition with other species living together. Finally, we analyze ecological tolerance and transformation factors, which seem to be crucial in future habitability projects.

  18. Advanced Plant Habitat

    NASA Image and Video Library

    2016-11-17

    A test unit, or prototype, of NASA's Advanced Plant Habitat (APH) was delivered to the Space Station Processing Facility at the agency's Kennedy Space Center in Florida. The APH is the largest plant chamber built for the agency. The unit is being prepared for engineering development tests to see how the science will integrate with the various systems of the plant habitat. It will have 180 sensors and four times the light output of Veggie. The APH will be delivered to the International Space Station in March 2017.

  19. Advanced Plant Habitat

    NASA Image and Video Library

    2016-11-17

    A test unit, or prototype, of NASA's Advanced Plant Habitat (APH) was delivered to the Space Station Processing Facility at the agency's Kennedy Space Center in Florida. The APH is the largest plant chamber built for the agency. The base of the APH is being prepared for engineering development tests to see how the science will integrate with the various systems of the plant habitat. It will have 180 sensors and four times the light output of Veggie. The APH will be delivered to the International Space Station in March 2017.

  20. Advanced Plant Habitat

    NASA Image and Video Library

    2016-11-17

    A test unit, or prototype, of NASA's Advanced Plant Habitat (APH) was delivered to the Space Station Processing Facility at the agency's Kennedy Space Center in Florida. The APH is the largest plant chamber built for the agency. Oscar Monje, a scientist on the Engineering Services Contract, prepares the base of the APH for engineering development tests to see how the science will integrate with the various systems of the plant habitat. The APH will have about 180 sensors and fourt times the light output of Veggie. The APH will be delivered to the International Space Station in March 2017.

  1. Geologic map of the Alligator Ridge area, including the Buck Mountain East and Mooney Basin Summit quadrangles and parts of the Sunshine Well NE and Long Valley Slough quadrangles, White Pine County, Nevada

    USGS Publications Warehouse

    Nutt, Constance J.

    2000-01-01

    Data set describes the geology of Paleozoic through Quaternary units in the Alligator Ridge area, which hosts disseminated gold deposits. These digital files were used to create the 1:24,000-scale geologic map of the Buck Mountain East and Mooney Basin Summit Quadrangles and parts of the Sunshine Well NE and Long Valley Slough Quadrangles, White Pine County, east-central Nevada.

  2. Non-native ecosystem engineer alters estuarine communities.

    PubMed

    Heiman, Kimberly W; Micheli, Fiorenza

    2010-08-01

    Many ecosystems are created by the presence of ecosystem engineers that play an important role in determining species' abundance and species composition. Additionally, a mosaic environment of engineered and non-engineered habitats has been shown to increase biodiversity. Non-native ecosystem engineers can be introduced into environments that do not contain or have lost species that form biogenic habitat, resulting in dramatic impacts upon native communities. Yet, little is known about how non-native ecosystem engineers interact with natives and other non-natives already present in the environment, specifically whether non-native ecosystem engineers facilitate other non-natives, and whether they increase habitat heterogeneity and alter the diversity, abundance, and distribution of benthic species. Through sampling and experimental removal of reefs, we examine the effects of a non-native reef-building tubeworm, Ficopomatus enigmaticus, on community composition in the central Californian estuary, Elkhorn Slough. Tubeworm reefs host significantly greater abundances of many non-native polychaetes and amphipods, particularly the amphipods Monocorophium insidiosum and Melita nitida, compared to nearby mudflats. Infaunal assemblages under F. enigmaticus reefs and around reef's edges show very low abundance and taxonomic diversity. Once reefs are removed, the newly exposed mudflat is colonized by opportunistic non-native species, such as M. insidiosum and the polychaete Streblospio benedicti, making removal of reefs a questionable strategy for control. These results show that provision of habitat by a non-native ecosystem engineer may be a mechanism for invasional meltdown in Elkhorn Slough, and that reefs increase spatial heterogeneity in the abundance and composition of benthic communities.

  3. Habitat Suitability Index Models: Beaver

    USGS Publications Warehouse

    Allen, Arthur W.

    1982-01-01

    Habitat preferences of the beaver (Castor canadensis) are described in this publication, which is one of a series of Habitat Suitability Index (HSI) models. Habitat use information is presented in a synthesis of the literature on the species-habitat requirements of the beaver, followed by the development of the HSI model. The model is designed to provide information for use in impact assessment and habitat management activities, and should be used in conjunction with habitat evaluation procedures previously developed by the Fish and Wildlife Service. This revised model updates the original publication dated September 1982.

  4. Habitat Suitability Information: Blacknose dace

    USGS Publications Warehouse

    Trial, Joan G.; Stanley, Jon G.; Batcheller, Mary; Gebhart, Gary; Maughan, O. Eugene; Nelson, Patrick C.

    1983-01-01

    A review and synthesis of existing information were used to develop riverine and lacustrine habitat models for Blacknose dace, a freshwater species. The models are scaled to produce an index of habitat suitability between 0 (unsuitable habitat) to 1 (optimally suitable habitat) for freshwater, marine, and estuarine areas of the continental United States. Habitat suitability indexes (HSI's) are designed for use with the habitat evaluation procedures developed by the U.S. Fish and Wildlife Service. Also included are discussions of Suitability Index (SI) curves as used in the Instream Flow Incremental Methodology (IFIM) and SI curves available for an IFIM analysis of Blacknose dace.

  5. Habitat Suitability Index Models: Marten

    USGS Publications Warehouse

    Allen, Arthur W.

    1982-01-01

    Habitat preferences and species characteristics of the pine marten (Martes americana) are described in this publication. It is one of a series of Habitat Suitability Index (HSI) models and was developed through an analysis of available scientific data on the species-habitat requirements of the pine marten. Habitat use information is presented in a review of the literature, followed by the development of a HSI model. The model is presented in three formats: graphic, word and mathematical. Suitability index graphs quantify the species-habitat relationship. These data are then synthesized into a model which is designed to provide information for use in impact assessment and habitat management activities.

  6. Habitat Suitability Index Models: Veery

    USGS Publications Warehouse

    Sousa, Patrick J.

    1982-01-01

    Habitat preferences and species characteristics of the veery (Catharus fuscesens) are described in this publication. It is one of a series of Habitat Suitability Index (HSI) models and was developed through an analysis of available scientific data on the habitat requirements of the veery. Habitat use information is presented in a review of the literature, followed by the development of an HSI model. The model is presented in three formats: graphic; word; and mathematical. Suitability index graphs quantify the species-habitat relationship. These data are synthesized into a model designed to provide information for use in impact assessment and habitat management.

  7. Indicators: Shallow Water Habitat/In-stream Fish Habitat

    EPA Pesticide Factsheets

    Shallow water habitat, also referred to as in-stream fish habitat, refers to areas that fish and other aquatic organisms need for concealment, breeding and feeding. This includes large woody snags, boulders, rock ledges, and undercut banks.

  8. Wildlife habitat fragmentation.

    Treesearch

    John. Lehmkuhl

    2005-01-01

    A primary issue in forest wildlife management is habitat fragmentation and its effects on viability, which is the "bottom line" for plant and animal species of conservation concern. Population viability is the likelihood that a population will be able to maintain itself (remain viable) over a long period of time-usually 100 years or more. Though it is true...

  9. Modeling sensitive elasmobranch habitats

    NASA Astrophysics Data System (ADS)

    Pennino, M. Grazia; Muñoz, Facundo; Conesa, David; López-Quílez, Antonio; Bellido, José Marí; a

    2013-10-01

    Basic information on the distribution and habitat preferences of ecologically important species is essential for their management and protection. In the Mediterranean Sea there is increasing concern over elasmobranch species because their biological (ecological) characteristics make them highly vulnerable to fishing pressure. Their removal could affect the structure and function of marine ecosystems, inducing changes in trophic interactions at the community level due to the selective elimination of predators or prey species, competitors and species replacement. In this study Bayesian hierarchical spatial models are used to map the sensitive habitats of the three most caught elasmobranch species (Galeus melastomus, Scyliorhinus canicula, Etmopterus spinax) in the western Mediterranean Sea, based on fishery-dependent bottom trawl data. Results show that habitats associated with hard substrata and sandy beds, mainly in deep waters and with a high seabed gradient, have a greater probability registering the presence of the studied species than those associated with muddy shallow waters. Temperature and chlorophyll-α concentration show a negative relationship with S. canicula occurrence. Our results identify some of the sensitive habitats for elasmobranchs in the western Mediterranean Sea (GSA06 South), providing essential and easy-to-use interpretation tools, such as predictive distribution maps, with the final aim of improving management and conservation of these vulnerable species.

  10. Saproxylic Hemiptera Habitat Associations

    Treesearch

    Michael D. Ulyshen; James L. Hanula; Robert L. Blinn; Gene. Kritsky

    2012-01-01

    Understanding the habitat requirements of organisms associated with dead wood is important in order to conserve them in managed forests. Unfortunately, many of the less diverse saproxylic taxa, including Hemiptera, remain largely unstudied. An effort to rear insects from dead wood taken from two forest types (an upland pine-dominated and a bottomland mixed hardwood),...

  11. Landscape habitats [Chapter 2

    Treesearch

    C. L. Simmons

    1994-01-01

    This landscape habitat description is based on a ground reconnaissance of the Lost Lake, West Glacier Lake, and East Glacier Lake portions of GLEES conducted during 10 days in July-September 1986 and on subsequent photo interpretation of 1:6000 scale color-infrared photographs. A ground check was conducted in July-August 1987. The classification used is a physiognomic...

  12. Earth is a Marine Habitat. Habitat Conservation Program.

    ERIC Educational Resources Information Center

    National Oceanic and Atmospheric Administration (DOC), Rockville, MD.

    This brochure is intended to educate the public about the need to conserve and preserve the earth's environment (man's habitat). It contains an introduction to the ocean world and threats to coastal habitat. Photos and narrative revolve around the theme "Earth is a Marine Habitat." Sections include: "The Web of…

  13. Chapter 5. Using Habitat Models for Habitat Mapping and Monitoring

    Treesearch

    Samuel A. Cushman; Timothy J. Mersmann; Gretchen G. Moisen; Kevin S. McKelvey; Christina D. Vojta

    2013-01-01

    This chapter provides guidance for applying existing habitat models to map and monitor wildlife habitat. Chapter 2 addresses the use of conceptual models to create a solid foundation for selecting habitat attributes to monitor and to translate these attributes into quantifiable and reportable monitoring measures. Most wildlife species, however, require a complex suite...

  14. Vegetative resistance to flow in South Florida; summary of vegetation sampling in Taylor Slough, Everglades National Park, September 1997-July 1998

    USGS Publications Warehouse

    Rybicki, N.B.; Reel, J.T.; Ruhl, H.; Gammon, P.A.; Carter, Virginia

    2001-01-01

    The U.S. Geological Survey is one of many agencies providing scientific support to the effort to restore the South Florida Everglades. In September and November 1997 and July 1998, vegetation was sampled at selected sites in the Everglades as part of a study to quantify vegetative resistance to flow. The objectives of the vegetation sampling are (1) to provide detailed information on species composition, vegetation characteristics, and biomass for quantification of the effect of vegetation on water flow, and (2) to use these data in the future to infer flow resistance from vegetation information. Forty-two vegetation quadrats were sampled in Taylor Slough to determine the number and width of stems and leaves and the biomass of live and dead standing sawgrass, rush, and other plants, and the biomass of dead litter and periphyton. The samples were grouped into ten vegetation classes based on species composition and total biomass minus periphyton biomass.

  15. Vegetative resistance to flow in South Florida; summary of vegetation sampling at sites NESRS3 and P33, Shark River slough, April 1996

    USGS Publications Warehouse

    Carter, Virginia; Ruhl, H.; Rybicki, N.B.; Reel, J.T.; Gammon, P.T.

    1999-01-01

    The U.S. Geological Survey is one of many agencies participating in the effort to restore the south Florida Everglades. We are sampling and characterizing the vegetation at selected sites in the Everglades as part of a study to quantify vegetative flow resistance. The objectives of the vegetative sampling are (1) to provide detailed information on species composition, vegetative characteristics, vegetative structure, and biomass for quantification of vegetative resistance to flow, and (2) to use this information to classify the vegetation and to improve existing vegetation maps for use with numerical models of surface-water flow. Vegetative sampling was conducted in the Shark River Slough in April, 1996. The data collected and presented here include live, dead, and periphyton biomass, vegetation characteristics and structure, and leaf area index.

  16. Vegetative resistance to flow in south Florida; summary of vegetation sampling at sites NESRS3 and P33, Shark River slough, November, 1996

    USGS Publications Warehouse

    Carter, Virginia; Reel, J.T.; Rybicki, N.B.; Ruhl, H.; Gammon, P.T.; Lee, J.K.

    1999-01-01

    The U.S. Geological Survey is one of many agencies participating in the effort to restore the South Florida Everglades. We are sampling and characterizing the vegetation at selected sites in the Everglades as part of a study to quantify vegetative flow resistance. The objectives of the vegetation sampling are (1) to provide detailed information on species composition, vegetation characteristics, vegetation structure, and biomass for quantification of vegetative resistance to flow, and (2) to use this information to classify the vegetation and to improve existing vegetation maps for use with numerical models of surface-water flow. Vegetation was sampled at two sites in the Shark River Slough in November, 1996. The data collected and presented here include those for live and dead standing sawgrass, other dead material, periphyton biomass, vegetation characteristics and structure, and leaf area index.

  17. NORTHWOODS Wildlife Habitat Data Base

    Treesearch

    Mark D. Nelson; Janine M. Benyus; Richard R. Buech

    1992-01-01

    Wildlife habitat data from seven Great Lakes National Forests were combined into a wildlife-habitat matrix named NORTHWOODS. Several electronic file formats of NORTHWOODS data base and documentation are available on floppy disks for microcomputers.

  18. Habitat Suitability Index Models: Bluegill

    USGS Publications Warehouse

    Stuber, Robert J.; Gebhart, Glen; Maughan, O. Eugene

    1982-01-01

    A literature review encompassing habitat and species characteristics of the bluegill (Lepomis macrochirus) is followed by a discussion of the relationship of habitat variables and life requisites of this species. These data re then incorporated into Habitat Suitability Index models for the bluegill. This is one in a series of publications describing habitat requirements of selected fish and wildlife species. Numerous literature sources have been consulted in an effort to consolidate scientific data on species habitat relationships. These data have subsequently been synthesized into Habitat Suitability Index (HSI) models. the models are based on suitability indices formulated for variables found to affect the life cycle and survival of the species. The models are designed to be modified to evaluate specific habitat alterations using the HSI model building techniques presented in the U.S. Fish and Wildlife Service's Habitat Evaluation Procedures.

  19. Sound solutions for habitat monitoring

    Treesearch

    Mary M. Rowland; Lowell H. Suring; Christina D. Vojta

    2015-01-01

    For agencies and organizations to effectively manage wildlife, knowledge about the status and trend of wildlife habitat is critical. Traditional wildlife monitoring, however, has focused on populations rather than habitat, because ultimately population status drives long-term species viability. Still, habitat loss has contributed to the decline of nearly all at-risk...

  20. Five new species of yeasts from fresh water and marine habitats in the Florida Everglades.

    PubMed

    Fell, Jack W; Statzell-Tallman, Adele; Scorzetti, Gloria; Gutiérrez, Marcelo H

    2011-03-01

    Yeast populations in the Shark River Slough of the Florida Everglades, USA, were examined during a 3-year period (2002-2005) at six locations ranging from fresh water marshes to marine mangroves. Seventy-four described species (33 ascomycetes and 41 basidiomycetes) and an approximately equal number of undescribed species were isolated during the course of the investigation. Serious human pathogens, such as Candida tropicalis, were not observed, which indicates that their presence in coastal waters is due to sources of pollution. Some of the observed species were widespread throughout the fresh water and marine habitats, whereas others appeared to be habitat restricted. Species occurrence ranged from prevalent to rare. Five representative unknown species were selected for formal description. The five species comprise two ascomycetes: Candida sharkiensis sp. nov. (CBS 11368(T)) and Candida rhizophoriensis sp. nov. (CBS 11402(T)) (Saccharomycetales, Metschnikowiaceae), and three basidiomycetes: Rhodotorula cladiensis sp. nov. (CBS 10878(T)) in the Sakaguchia clade (Cystobasidiomycetes), Rhodotorula evergladiensis sp. nov. (CBS 10880(T)) in the Rhodosporidium toruloides clade (Microbotryomycetes, Sporidiobolales) and Cryptococcus mangaliensis sp. nov. (CBS 10870(T)) in the Bulleromyces clade (Agaricomycotina, Tremellales).

  1. Habitats of Life

    NASA Astrophysics Data System (ADS)

    Dirk, Schulze-Makuch; Irwin, Louis N.

    There are four principal habitats in which life may exist - the surface of a planetary body, its subsurface, its atmosphere and space. From our own experience we know that life does exist on the surface of a planet, in its subsurface, and transiently at least in the atmosphere. Where it is present, it exists in a surprising diversity and in a variety of microhabitats, from deep caverns (Hose et al. 2000, Melim et al. 2001) to hydrothermal fluids and hot springs of various chemistries (Jannasch 1995, Rzonca and Schulze-Makuch 2002), to the frozen deserts of Antarctica (Friedmann 1982, Sun and Friedmann 1999). In this chapter we will elaborate on the principal habitats, the constraints they impose on life, and the possibilities they provide.

  2. Measuring acoustic habitats.

    PubMed

    Merchant, Nathan D; Fristrup, Kurt M; Johnson, Mark P; Tyack, Peter L; Witt, Matthew J; Blondel, Philippe; Parks, Susan E

    2015-03-01

    1. Many organisms depend on sound for communication, predator/prey detection and navigation. The acoustic environment can therefore play an important role in ecosystem dynamics and evolution. A growing number of studies are documenting acoustic habitats and their influences on animal development, behaviour, physiology and spatial ecology, which has led to increasing demand for passive acoustic monitoring (PAM) expertise in the life sciences. However, as yet, there has been no synthesis of data processing methods for acoustic habitat monitoring, which presents an unnecessary obstacle to would-be PAM analysts. 2. Here, we review the signal processing techniques needed to produce calibrated measurements of terrestrial and aquatic acoustic habitats. We include a supplemental tutorial and template computer codes in matlab and r, which give detailed guidance on how to produce calibrated spectrograms and statistical analyses of sound levels. Key metrics and terminology for the characterisation of biotic, abiotic and anthropogenic sound are covered, and their application to relevant monitoring scenarios is illustrated through example data sets. To inform study design and hardware selection, we also include an up-to-date overview of terrestrial and aquatic PAM instruments. 3. Monitoring of acoustic habitats at large spatiotemporal scales is becoming possible through recent advances in PAM technology. This will enhance our understanding of the role of sound in the spatial ecology of acoustically sensitive species and inform spatial planning to mitigate the rising influence of anthropogenic noise in these ecosystems. As we demonstrate in this work, progress in these areas will depend upon the application of consistent and appropriate PAM methodologies.

  3. Measuring acoustic habitats

    PubMed Central

    Merchant, Nathan D; Fristrup, Kurt M; Johnson, Mark P; Tyack, Peter L; Witt, Matthew J; Blondel, Philippe; Parks, Susan E

    2015-01-01

    1. Many organisms depend on sound for communication, predator/prey detection and navigation. The acoustic environment can therefore play an important role in ecosystem dynamics and evolution. A growing number of studies are documenting acoustic habitats and their influences on animal development, behaviour, physiology and spatial ecology, which has led to increasing demand for passive acoustic monitoring (PAM) expertise in the life sciences. However, as yet, there has been no synthesis of data processing methods for acoustic habitat monitoring, which presents an unnecessary obstacle to would-be PAM analysts. 2. Here, we review the signal processing techniques needed to produce calibrated measurements of terrestrial and aquatic acoustic habitats. We include a supplemental tutorial and template computer codes in matlab and r, which give detailed guidance on how to produce calibrated spectrograms and statistical analyses of sound levels. Key metrics and terminology for the characterisation of biotic, abiotic and anthropogenic sound are covered, and their application to relevant monitoring scenarios is illustrated through example data sets. To inform study design and hardware selection, we also include an up-to-date overview of terrestrial and aquatic PAM instruments. 3. Monitoring of acoustic habitats at large spatiotemporal scales is becoming possible through recent advances in PAM technology. This will enhance our understanding of the role of sound in the spatial ecology of acoustically sensitive species and inform spatial planning to mitigate the rising influence of anthropogenic noise in these ecosystems. As we demonstrate in this work, progress in these areas will depend upon the application of consistent and appropriate PAM methodologies. PMID:25954500

  4. Integral habitat transport system

    NASA Technical Reports Server (NTRS)

    Elliott, Bill; Frazer, Scott; Higgs, Joey; Huff, Jason; Milam, Tigree

    1994-01-01

    In the 1993 Fall quarter, the ME 4182 design class was sponsored to study various scenarios that needed to be studied for Martian travel. The class was sponsored by NASA and there were several different design projects. The design that group three chose was an integral transport system for a Martian habitat. An integral transport system means the design had to be one that was attached to the habitat. There were several criteria that the design had to meet. Group three performed an in depth study of the Martian environment and looked at several different design ideas. The concept group three developed involved the use of kinematic linkages and the use of Martian gravity to move the habitat. The various design concepts, the criteria matrices and all other aspects that helped group three develop their design can be found in their 1993 ME 4182 design report. Now it is Winter quarter 1994 and group three is faced with another problem. The problem is building a working prototype of their Fall design. The limitations this quarter were the parts. The group had to make the prototype work with existing manufactured parts or make the parts themselves in a machine shop. The prototype was scaled down roughly about twelve times smaller than the original design. The following report describes the actions taken by group three to build a working model.

  5. Habitat Suitability Index Models: Wood duck

    USGS Publications Warehouse

    Sousa, Patrick J.; Farmer, Adrian H.

    1983-01-01

    A review and synthesis of existing information were used to develop models for breeding and wintering habitats for the wood duck (Aix sponsa). The models are scaled to produce indices of habitat suitability between 0 (unsuitable habitat) and 1 (optimally suitable habitat). Habitat suitability indices are designed for use with Habitat Evaluation Procedures previously developed by the U.S. Fish and Wildlife Service.

  6. Habitat Suitability Index Models: Littleneck clam

    USGS Publications Warehouse

    Rodnick, Kenneth; Li, Hiram W.

    1983-01-01

    The littleneck clam, a member of the family Veneridae, is a hardshell species found in estuaries, bays, sloughs, and open coastl ines along the Pacific coast. This clam primarily inhabits the intertidal zone, but also occurs in subtidal areas (Hancock et ale 1979). It ranges from the Aleutian Islands to Socorro Island, r,1exico (Fraser and Smith 1928; Fitch 1953). It is commercially important only in Br{tish Columbia and Washington, where it is a highly regarded table item (Goodwin 1971).

  7. Advanced Plant Habitat

    NASA Image and Video Library

    2016-11-17

    A test unit, or prototype, of NASA's Advanced Plant Habitat (APH) was delivered to the Space Station Processing Facility at the agency's Kennedy Space Center in Florida. Inside a laboratory, Engineering Services Contract engineers set up test parameters on computers. From left, are Glenn Washington, ESC quality engineer; Claton Grosse, ESC mechanical engineer; and Jeff Richards, ESC project scientist. The APH is the largest plant chamber built for the agency. It will have 180 sensors and four times the light output of Veggie. The APH will be delivered to the International Space Station in March 2017.

  8. Advanced Plant Habitat (APH)

    NASA Image and Video Library

    2017-03-16

    A test unit, or prototype, of NASA's Advanced Plant Habitat (APH) with its first initial grow test in the Space Station Processing Facility at the agency's Kennedy Space Center in Florida. The taller plants pictured are dwarf wheat and the smaller plants are Arabidopsis. Developed by NASA and ORBITEC of Madison, Wisconsin, the APH is the largest plant chamber built for the agency. It is a fully automated plant growth facility that will be used to conduct bioscience research on the International Space Station. The APH will be delivered to the space station aboard future Commercial Resupply Services missions.

  9. Plant Habitat (PH)

    NASA Technical Reports Server (NTRS)

    Onate, Bryan

    2016-01-01

    The International Space Station (ISS) will soon have a platform for conducting fundamental research of Large Plants. Plant Habitat (PH) is designed to be a fully controllable environment for high-quality plant physiological research. PH will control light quality, level, and timing, temperature, CO2, relative humidity, and irrigation, while scrubbing ethylene. Additional capabilities include leaf temperature and root zone moisture and oxygen sensing. The light cap will have red (630 nm), blue (450 nm), green (525 nm), far red (730 nm) and broad spectrum white LEDs. There will be several internal cameras (visible and IR) to monitor and record plant growth and operations.

  10. Vacant habitats in the Universe.

    PubMed

    Cockell, Charles S

    2011-02-01

    The search for life on other planets usually makes the assumption that where there is a habitat, it will contain life. On the present-day Earth, uninhabited habitats (or vacant habitats) are rare, but might occur, for example, in subsurface oils or impact craters that have been thermally sterilized in the past. Beyond Earth, vacant habitats might similarly exist on inhabited planets or on uninhabited planets, for example on a habitable planet where life never originated. The hypothesis that vacant habitats are abundant in the Universe is testable by studying other planets. In this review, I discuss how the study of vacant habitats might ultimately inform an understanding of how life has influenced geochemical conditions on Earth. Copyright © 2010 Elsevier Ltd. All rights reserved.

  11. Airborne Lidar Measurements of Below-canopy Surface Water Height , Slope and Optical Properties in the Florida Everglades Shark River Slough

    NASA Astrophysics Data System (ADS)

    Dabney, P.; Harding, D. J.; Valett, S. R.; Yu, A. W.; Feliciano, E. A.; Neuenschwander, A. L.; Pitts, K.

    2015-12-01

    with 8 cm ranging precision, the surface altimetry data is acquired with very high spatial and vertical resolution. Examples of these capabilities will be shown using data collected in 2011 along and across the flow axis of the Florida Everglades Shark River Slough, targeting the slough's Long Term Ecology Research (LTER) field sites.

  12. Partial gravity habitat study

    NASA Technical Reports Server (NTRS)

    Capps, Stephen; Lorandos, Jason; Akhidime, Eval; Bunch, Michael; Lund, Denise; Moore, Nathan; Murakawa, Kiosuke

    1989-01-01

    The purpose of this study is to investigate comprehensive design requirements associated with designing habitats for humans in a partial gravity environment, then to apply them to a lunar base design. Other potential sites for application include planetary surfaces such as Mars, variable-gravity research facilities, and a rotating spacecraft. Design requirements for partial gravity environments include locomotion changes in less than normal earth gravity; facility design issues, such as interior configuration, module diameter, and geometry; and volumetric requirements based on the previous as well as psychological issues involved in prolonged isolation. For application to a lunar base, it is necessary to study the exterior architecture and configuration to insure optimum circulation patterns while providing dual egress; radiation protection issues are addressed to provide a safe and healthy environment for the crew; and finally, the overall site is studied to locate all associated facilities in context with the habitat. Mission planning is not the purpose of this study; therefore, a Lockheed scenario is used as an outline for the lunar base application, which is then modified to meet the project needs. The goal of this report is to formulate facts on human reactions to partial gravity environments, derive design requirements based on these facts, and apply the requirements to a partial gravity situation which, for this study, was a lunar base.

  13. Clackamas/Hood River Habitat Enhancement Program, 1988 Annual Report.

    SciTech Connect

    Bettin, Scott

    1989-04-01

    The Collawash Falls Fish Passage Project began in August of 1987, and resulted in completion of Phase I of the construction of the fish passage facility. A core team of Forest Service personnel. led by fish passage specialists from R-10, Alaska, excavated a trench in the bedrock face of the falls that is approximately 95 feet long, 8 feet deep and 10 feet wide. Implementation of Phase II of the project was put on hold in July of 1988. when 50 yards of rock from the adjacent headwall sloughed into the trench. During September and October of 1988 the larger rocks were reduced in size by blasting. High water flows in November moved the blasted rock from the trench. The project is being done by the Mt. Hood National Forest with funds supplied by the Bonneville Power Administration (BPA) under the NWPPC's Fish and Wildlife Program, Measure 703(c). Action Item 4.2, in consultation with the Oregon Department of Fish and Wildlife (ODF&W). Successful modification of the Collawash Falls will allow anadromous fish full access to over 10 miles of acknowledged high quality spawning and rearing habitat. The total anadromous fish production benefits gained from utilization of this habitat, assuming a 10 year project life with a 4% discount factor is $1,690,019.00. In 1974, several partial barriers to anadromous fish in the form of small falls and cataracts located immediately above the trench, were modified for full passage by blasting. This work conducted by the Forest Service was fully successful in allowing fish passage through all but the main barrier in Collawash Falls. Other Collawash River fisheries projects include the 1984 construction of a fish liberation access site above the falls for the PGE/ODFW spring chinook trap and haul program. Funding for the project came from revenues generated by an adjacent Forest Service timber sale. In summer of 1985, 30,000 spring chinook presmolts were stocked at this liberation site. In spring of 1987. 10,000 coho pre-smolts were

  14. NASA Habitat Demonstration Unit (HDU) Deep Space Habitat Analog

    NASA Technical Reports Server (NTRS)

    Howe, A. Scott; Kennedy, Kriss J.; Gill, Tracy

    2013-01-01

    The NASA Habitat Demonstration Unit (HDU) vertical cylinder habitat was established as a exploration habitat testbed platform for integration and testing of a variety of technologies and subsystems that will be required in a human-occupied planetary surface outpost or Deep Space Habitat (DSH). The HDU functioned as a medium-fidelity habitat prototype from 2010-2012 and allowed teams from all over NASA to collaborate on field analog missions, mission operations tests, and system integration tests to help shake out equipment and provide feedback for technology development cycles and crew training. This paper documents the final 2012 configuration of the HDU, and discusses some of the testing that took place. Though much of the higher-fidelity functionality has 'graduated' into other NASA programs, as of this writing the HDU, renamed Human Exploration Research Analog (HERA), will continue to be available as a volumetric and operational mockup for NASA Human Research Program (HRP) research from 2013 onward.

  15. NASA Habitat Demonstration Unit (HDU) Deep Space Habitat Analog

    NASA Technical Reports Server (NTRS)

    Howe, A. Scott; Kennedy, Kriss J.; Gill, Tracy

    2013-01-01

    The NASA Habitat Demonstration Unit (HDU) vertical cylinder habitat was established as a exploration habitat testbed platform for integration and testing of a variety of technologies and subsystems that will be required in a human-occupied planetary surface outpost or Deep Space Habitat (DSH). The HDU functioned as a medium-fidelity habitat prototype from 2010-2012 and allowed teams from all over NASA to collaborate on field analog missions, mission operations tests, and system integration tests to help shake out equipment and provide feedback for technology development cycles and crew training. This paper documents the final 2012 configuration of the HDU, and discusses some of the testing that took place. Though much of the higher-fidelity functionality has 'graduated' into other NASA programs, as of this writing the HDU, renamed Human Exploration Research Analog (HERA), will continue to be available as a volumetric and operational mockup for NASA Human Research Program (HRP) research from 2013 onward.

  16. Determination and comparative analysis of the small RNA genomic sequences of California encephalitis, Jamestown Canyon, Jerry Slough, Melao, Keystone and Trivittatus viruses (Bunyaviridae, genus Bunyavirus, California serogroup).

    PubMed

    Bowen, M D; Jackson, A O; Bruns, T D; Hacker, D L; Hardy, J L

    1995-03-01

    The nucleotide sequences of the small (S) genomic RNAs of six California (CAL) serogroup bunyaviruses (Bunyaviridae: genus Bunyavirus) were determined. The S RNAs of two California encephalitis virus strains, two Jamestown Canyon virus strains, Jerry Slough virus, Melao virus, Keystone virus and Trivittatus virus contained the overlapping nucleocapsid (N) and non-structural (NSs) protein open reading frames (ORFs) as described previously for the S RNAs of other CAL serogroup viruses. All N protein ORFs were 708 nucleotides in length and encoded a putative 235 amino acid gene product. The NSs ORFs were found to be of two lengths, 279 and 294 nucleotides, which potentially encode 92 and 97 amino acid proteins, respectively. The complementary termini and a purine-rich sequence in the 3' non-coding region (genome-complementary sense) were highly conserved amongst CAL serogroup bunyavirus S RNAs. Phylogenetic analyses of N ORF sequences indicate that the CAL serogroup bunyaviruses can be divided into three monophyletic lineages corresponding to three of the complexes previously derived by serological classification. The truncated version of the NSs protein, which is found in five CAL serogroup bunyaviruses, appears to have arisen twice during virus evolution.

  17. Occupancy in continuous habitat

    USGS Publications Warehouse

    Efford, Murray G.; Dawson, Deanna K.

    2012-01-01

    The probability that a site has at least one individual of a species ('occupancy') has come to be widely used as a state variable for animal population monitoring. The available statistical theory for estimation when detection is imperfect applies particularly to habitat patches or islands, although it is also used for arbitrary plots in continuous habitat. The probability that such a plot is occupied depends on plot size and home-range characteristics (size, shape and dispersion) as well as population density. Plot size is critical to the definition of occupancy as a state variable, but clear advice on plot size is missing from the literature on the design of occupancy studies. We describe models for the effects of varying plot size and home-range size on expected occupancy. Temporal, spatial, and species variation in average home-range size is to be expected, but information on home ranges is difficult to retrieve from species presence/absence data collected in occupancy studies. The effect of variable home-range size is negligible when plots are very large (>100 x area of home range), but large plots pose practical problems. At the other extreme, sampling of 'point' plots with cameras or other passive detectors allows the true 'proportion of area occupied' to be estimated. However, this measure equally reflects home-range size and density, and is of doubtful value for population monitoring or cross-species comparisons. Plot size is ill-defined and variable in occupancy studies that detect animals at unknown distances, the commonest example being unlimited-radius point counts of song birds. We also find that plot size is ill-defined in recent treatments of "multi-scale" occupancy; the respective scales are better interpreted as temporal (instantaneous and asymptotic) rather than spatial. Occupancy is an inadequate metric for population monitoring when it is confounded with home-range size or detection distance.

  18. A Wildlife Habitat Improvement Plan.

    ERIC Educational Resources Information Center

    Rogers, S. Elaine

    The document presents an overview of Stony Acres, a "sanctuary" for wildlife as well as a place for recreation enjoyment and education undertakings. A review of the history of wildlife habitat management at Stony Acres and the need for continued and improved wildlife habitat management for the property are discussed in Chapter I. Chapter…

  19. Forest habitat types of Montana

    Treesearch

    Robert D. Pfister; Bernard L. Kovalchik; Stephen F. Arno; Richard C. Presby

    1977-01-01

    A land-classification system based upon potential natural vegetation is presented for the forests of Montana. It is based on an intensive 4-year study and reconnaissance sampling of about 1,500 stands. A hierarchical classification of forest sites was developed using the habitat type concept. A total of 9 climax series, 64 habitat types, and 37 additional phases of...

  20. Habitat modeling for biodiversity conservation.

    Treesearch

    Bruce G. Marcot

    2006-01-01

    Habitat models address only 1 component of biodiversity but can be useful in addressing and managing single or multiple species and ecosystem functions, for projecting disturbance regimes, and in supporting decisions. I review categories and examples of habitat models, their utility for biodiversity conservation, and their roles in making conservation decisions. I...

  1. Clay Animals and Their Habitats

    ERIC Educational Resources Information Center

    Adamson, Kay

    2010-01-01

    Creating clay animals and their habitats with second-grade students has long been one of the author's favorite classroom activities. Students love working with clay and they also enjoy drawing animal homes. In this article, the author describes how the students created a diorama instead of drawing their clay animal's habitat. This gave students…

  2. A Wildlife Habitat Improvement Plan.

    ERIC Educational Resources Information Center

    Rogers, S. Elaine

    The document presents an overview of Stony Acres, a "sanctuary" for wildlife as well as a place for recreation enjoyment and education undertakings. A review of the history of wildlife habitat management at Stony Acres and the need for continued and improved wildlife habitat management for the property are discussed in Chapter I. Chapter…

  3. Clay Animals and Their Habitats

    ERIC Educational Resources Information Center

    Adamson, Kay

    2010-01-01

    Creating clay animals and their habitats with second-grade students has long been one of the author's favorite classroom activities. Students love working with clay and they also enjoy drawing animal homes. In this article, the author describes how the students created a diorama instead of drawing their clay animal's habitat. This gave students…

  4. Food technology in space habitats

    NASA Technical Reports Server (NTRS)

    Karel, M.

    1979-01-01

    The research required to develop a system that will provide for acceptable, nutritious, and safe diets for man during extended space missions is discussed. The development of a food technology system for space habitats capable of converting raw materials produced in the space habitats into acceptable food is examined.

  5. Habitat Design Optimization and Analysis

    NASA Technical Reports Server (NTRS)

    SanSoucie, Michael P.; Hull, Patrick V.; Tinker, Michael L.

    2006-01-01

    Long-duration surface missions to the Moon and Mars will require habitats for the astronauts. The materials chosen for the habitat walls play a direct role in the protection against the harsh environments found on the surface. Choosing the best materials, their configuration, and the amount required is extremely difficult due to the immense size of the design region. Advanced optimization techniques are necessary for habitat wall design. Standard optimization techniques are not suitable for problems with such large search spaces; therefore, a habitat design optimization tool utilizing genetic algorithms has been developed. Genetic algorithms use a "survival of the fittest" philosophy, where the most fit individuals are more likely to survive and reproduce. This habitat design optimization tool is a multi-objective formulation of structural analysis, heat loss, radiation protection, and meteoroid protection. This paper presents the research and development of this tool.

  6. Habitat Suitability Index Models: Baird's sparrow

    USGS Publications Warehouse

    Sousa, Patrick J.; McDonal, W. Neil

    1983-01-01

    A review and synthesis of existing information were used to develop a habitat model for Baird's sparrow. The model is scaled to produce an index of suitability between 0 (unsuitable habitat) to 1 (optimally suitable habitat) for Baird's sparrow habitat in the Northern Great Plains. Habitat suitability indices are designed for use with Habitat Evaluation Procedures previously developed by the U.S. Fish and Wildlife Service.

  7. Habitat Suitability Index Models: Downy woodpecker

    USGS Publications Warehouse

    Schroeder, Richard L.

    1983-01-01

    A review and synthesis of existing information was used to develop a habitat model for the downy woodpecker (Picoides eubescens). The model is scaled to produce an index of habitat suitability between 0 (unsuitable habitat) and 1 (optimally suitable habitat) for areas of the continental United States. Habitat suitability indexes are designed for use with Habitat Evaluation Procedures previously developed by the U.S. Fish and Wildlife Service.

  8. Habitat Suitability Index Models: Pileated woodpecker

    USGS Publications Warehouse

    Schroeder, Richard L.

    1983-01-01

    A review and synthesis of existing information was used to develop a habitat model for the pileated woodpecker (Dryocopus pileatus). The model is scaled to produce an index of habitat suitability between 0 (unsuitable habitat) and 1 (optimally suitable habitat) for areas of the continental United States. Habitat suitability indexes are designed for use.with Habitat Evaluation Procedures previously developed by the U.S. Fish and Wildlife Service.

  9. Habitat Suitability Index Models: Longnose dace

    USGS Publications Warehouse

    Edwards, Elizabeth A.; Li, Hiram; Schreck, Carl B.

    1983-01-01

    A review and synthesis of existing information were used to develop riverine and lacustrine habitat models for longnose dace (Rhinichthys cataractae), a freshwater fish. The models are scaled to produce an index of habitat suitability between 0 (unsuitable habitat) to 1 (optimally suitable habitat) for freshwater, marine and estuarine areas of the continental United States. Habitat suitability indexes (HSI's) are designed for use with the habitat evaluation procedures developed by the U.S. Fish and Wildlife Service.

  10. Types of habitat in the Universe

    NASA Astrophysics Data System (ADS)

    Cockell, Charles S.

    2014-04-01

    From a biological point of view, all environments in the Universe can be categorized into one of three types: uninhabitable, uninhabited habitat or inhabited habitat. This paper describes and defines different habitat types in the Universe with a special focus on environments not usually encountered on the Earth, but which might be common on other planetary bodies. They include uninhabited habitats, subtypes of which are sterile habitats and organic-free habitats. Examples of the different types of environments are provided with reference to the Eyjafjallajökull, Iceland. These habitat types are used to identify testable hypotheses on the abundance of different habitats and the distribution of life in the Universe.

  11. Habitat Suitability Index Models: Yellow perch

    USGS Publications Warehouse

    Krieger, Douglas A.; Terrell, James W.; Nelson, Patrick C.

    1983-01-01

    A review and synthesis of existing information were used to develop riverine and lacustrine habitat models for yellow perch (Perca flavescens). The models are scaled to produce an index of habitat suitability between 0 (unsuitable habitat) to 1 (optimally suitable habitat) for riverine, lacustrine, and palustrine habitat in the 48 contiguous United States. Habitat Suitability Indexes (HSI's) are designed for use with the Habitat Evaluation Procedures developed by the U.S. Fish and Wildlife Service. Also included are discussions of Suitability Index (SI) curves as used in the Instream Flow Incremental Methodology (IFIM) and SI curves available for an IFIM analysis of yellow perch habitat.

  12. Space habitat contamination model

    NASA Technical Reports Server (NTRS)

    Morgenthaler, George W.

    1990-01-01

    When one considers the missions that are involved in Space Exploration Initiative (SEI), a continuous Lunar Base at which astronauts will perform scientific experiments as well as being the center for Lunar resource exploitation, a human visit to the surface of Mars, and, later, the development of a Mars base, one recognizes that we have entered a new realm of space exploration activity. During the SEI era, human beings who are involved in such missions will be away from Earth for extended periods of time, even for years. For example, the classical Hohmann transfer round trip mission to Mars would involve a flight of 31 months, including the stay time in the vicinity of Mars. Of course, other Mars trips such as the Venus Fly-By mission (22 months) and the Mars Sprint mission (15 months) pose much less taxing problems, but still problems which put human space presence in a domain where human survival has not yet been tested and thoroughly understood. Humans have never before been placed into an isolated, low-gravity, hermetically sealed, contaminant-prone environment for periods well in excess of one year and then been expected to function normally upon return to Earth. This presentation develops a systems model to help analyze the space habitat containment growth problem and to indicate the thresholds of astronaut risk, astronaut operational impairment, and methods of risk mitigation. The model inputs were discussed with toxicology experts at the University of Colorado Health Services Center and the University of Rochester.

  13. Habitat-specific foraging of prothonotary warblers: Deducing habitat quality

    USGS Publications Warehouse

    Lyons, J.E.

    2005-01-01

    Foraging behavior often reflects food availability in predictable ways. For example, in habitats where food availability is high, predators should attack prey more often and move more slowly than in habitats where food availability is low. To assess relative food availability and habitat quality, I studied the foraging behavior of breeding Prothonotary Warblers (Protonotaria citrea) in two forest habitat types, cypress-gum swamp forest and coastal-plain levee forest. I quantified foraging behavior with focal animal sampling and continuous recording during foraging bouts. I measured two aspects of foraging behavior: 1) prey attack rate (attacks per minute), using four attack maneuvers (glean, sally, hover, strike), and 2) foraging speed (movements per minute), using three types of movement (hop, short flight [???1 m], long flight [>1 m]). Warblers attacked prey more often in cypress-gum swamp forest than in coastal-plain levee forest. Foraging speed, however, was not different between habitats. I also measured foraging effort (% time spent foraging) and relative frequency of attack maneuvers employed in each habitat; neither of these variables was influenced by forest type. I conclude that Prothonotary Warblers encounter more prey when foraging in cypress-gum swamps than in coastal-plain levee forest, and that greater food availability results in higher density and greater reproductive success for birds breeding in cypress-gum swamp.

  14. Synergistic effect of interferon-gamma and tumor necrosis factor-alpha on coxsackievirus and adenovirus receptor expression: an explanation of cell sloughing during testicular inflammation in mice.

    PubMed

    Gao, Ying; Lui, Wing-Yee

    2014-03-01

    Coxsackievirus and adenovirus receptor (CAR) is a junction molecule that expresses on Sertoli and germ cells. It mediates Sertoli-germ cell adhesion and facilitates migration of preleptotene/leptotene spermatocytes across the blood-testis barrier, suggesting that CAR-based cell adhesion and migration are crucial for spermatogenesis. Interferon-gamma (IFNG) and tumor necrosis factor alpha (TNF) are two major cytokines that are elevated during testicular inflammation and cause reduced fertility. We investigated the mechanism by which IFNG and TNF exert their disruptive effects on testicular cell adhesion. We have demonstrated that combined treatment with IFNG and TNF (IFNG+TNF) exerts a synergistic effect by downregulating CAR mRNA and protein levels. Immunofluorescence staining revealed that IFNG+TNF treatment effectively removes CAR from the site of cell-cell contact. Using inhibitor and co-immunoprecipitation, we confirmed that IFNG+TNF mediates CAR protein degradation via ubiquitin-proteasome and NFKB pathways. Blockage of ubiquitin-proteasome pathway significantly inhibits CAR degradation, as indicated by the reappearance of CAR at the site of cell-cell contact. Additionally, IFNG+TNF reduces CAR mRNA via transcriptional regulation. Mutational studies have shown that IFNG+TNF-induced CAR repression is achieved by suppression of the basal transcription. Electrophoretic mobility shift assay and chromatin immunoprecipitation assays further confirmed that IFNG+TNF treament not only inhibits binding of the basal transcription factors but also promotes binding of NFKB subunits and Sp1 (negative regulators) to the CAR promoter region. Taken together, IFNG+TNF treatment significantly downregulates CAR expression, which provides an explanation of how cell sloughing in the epithelium mediates, by loss of CAR-based cell adhesion, during testicular inflammation.

  15. Deep Space Habitat Concept Demonstrator

    NASA Technical Reports Server (NTRS)

    Bookout, Paul S.; Smitherman, David

    2015-01-01

    This project will develop, integrate, test, and evaluate Habitation Systems that will be utilized as technology testbeds and will advance NASA's understanding of alternative deep space mission architectures, requirements, and operations concepts. Rapid prototyping and existing hardware will be utilized to develop full-scale habitat demonstrators. FY 2014 focused on the development of a large volume Space Launch System (SLS) class habitat (Skylab Gen 2) based on the SLS hydrogen tank components. Similar to the original Skylab, a tank section of the SLS rocket can be outfitted with a deep space habitat configuration and launched as a payload on an SLS rocket. This concept can be used to support extended stay at the Lunar Distant Retrograde Orbit to support the Asteroid Retrieval Mission and provide a habitat suitable for human missions to Mars.

  16. Habitat classification modeling with incomplete data: Pushing the habitat envelope

    USGS Publications Warehouse

    Zarnetske, P.L.; Edwards, T.C.; Moisen, G.G.

    2007-01-01

    Habitat classification models (HCMs) are invaluable tools for species conservation, land-use planning, reserve design, and metapopulation assessments, particularly at broad spatial scales. However, species occurrence data are often lacking and typically limited to presence points at broad scales. This lack of absence data precludes the use of many statistical techniques for HCMs. One option is to generate pseudo-absence points so that the many available statistical modeling tools can be used. Traditional techniques generate pseudoabsence points at random across broadly defined species ranges, often failing to include biological knowledge concerning the species-habitat relationship. We incorporated biological knowledge of the species-habitat relationship into pseudo-absence points by creating habitat envelopes that constrain the region from which points were randomly selected. We define a habitat envelope as an ecological representation of a species, or species feature's (e.g., nest) observed distribution (i.e., realized niche) based on a single attribute, or the spatial intersection of multiple attributes. We created HCMs for Northern Goshawk (Accipiter gentilis atricapillus) nest habitat during the breeding season across Utah forests with extant nest presence points and ecologically based pseudo-absence points using logistic regression. Predictor variables were derived from 30-m USDA Landfire and 250-m Forest Inventory and Analysis (FIA) map products. These habitat-envelope-based models were then compared to null envelope models which use traditional practices for generating pseudo-absences. Models were assessed for fit and predictive capability using metrics such as kappa, thresholdindependent receiver operating characteristic (ROC) plots, adjusted deviance (Dadj2), and cross-validation, and were also assessed for ecological relevance. For all cases, habitat envelope-based models outperformed null envelope models and were more ecologically relevant, suggesting

  17. The ecology of urban habitats

    SciTech Connect

    Gilbert, O.L.

    1989-01-01

    This book provides an overview of the structure and function of urban ecosystems as well as a summary of existing information on specific urban habitats. The introduction and first four chapters of the book review characteristics of urban flora and fauna, urban climate and air pollution, soils and vegetation dynamics. The remaining 11 chapters cover the ecology and management of specific urban habitat types, with case studies included.

  18. Biodiversity in urban habitat patches.

    PubMed

    Angold, P G; Sadler, J P; Hill, M O; Pullin, A; Rushton, S; Austin, K; Small, E; Wood, B; Wadsworth, R; Sanderson, R; Thompson, K

    2006-05-01

    We examined the biodiversity of urban habitats in Birmingham (England) using a combination of field surveys of plants and carabid beetles, genetic studies of four species of butterflies, modelling the anthropochorous nature of the floral communities and spatially explicit modelling of selected mammal species. The aim of the project was to: (i) understand the ecological characteristics of the biota of cities model, (ii) examine the effects of habitat fragment size and connectivity upon the ecological diversity and individual species distributions, (iii) predict biodiversity in cities, and (iv) analyse the extent to which the flora and fauna utilise the 'urban greenways' both as wildlife corridors and as habitats in their own right. The results suggest that cities provide habitats for rich and diverse range of plants and animals, which occur sometimes in unlikely recombinant communities. The studies on carabids and butterflies illustrated the relative importance of habitat quality on individual sites as opposed to site location within the conurbation. This suggests that dispersal for most of our urban species is not a limiting factor in population persistence, although elements of the woodland carabid fauna did appear to have some geographical structuring. Theoretical models suggested that dormice and water voles may depend on linear habitats for dispersal. The models also indicated that other groups, such as small and medium sized mammals, may use corridors, although field-based research did not provide any evidence to suggest that plants or invertebrates use urban greenways for dispersal. This finding indicates the importance of identifying a target species or group of species for urban greenways intended as dispersal routeways rather than as habitat in their own right. Their importance for most groups is rather that greenways provide a chain of different habitats permeating the urban environment. We suggest that planners can have a positive impact on urban

  19. Geopressured habitat: A literature review

    SciTech Connect

    Negus-de Wys, Jane

    1992-09-01

    A literature review of the geopressured-geothermal habitat is summarized. Findings are presented and discussed with respect to the principal topics: Casual agents are both geological and geochemical; they include disequilibrium compaction of sediments, clay diagenesis, aquathermal pressuring, hydrocarbon generation, and lateral tectonic compression. The overall physical and chemical characteristics of the habitats are dictated by varying combinations of sedimentation rates, alteration mineralogy, permeability, porosity and pressure, temperature, fluid content and chemistry, and hydrodynamic flow. Habitat pressure seals are considered in terms of their formation processes, geologic characteristics, and physical behavior, including pressure release and reservoir pressure recharge on a geologic time scale. World-wide occurrence of geopressured-geothermal habitats is noted. The main thrust of this topic concerns the U.S.A. and Canada; in addition, reference is made to occurrences in China and indications from deep-sea vents, as well as the contribution of paleo-overpressure to habitat initiation and maintenance. Identification and assessment of the habitat is addressed in relation to use of hydrogeologic, geophysical, geochemical, and geothermic techniques, as well as well-logging and drill-stem-test data. Conclusions concerning the adequacy of the current state of knowledge and its applicability to resource exploration and development are set forth, together with recommendations for the thrust of future work.

  20. Asotin Creek Instream Habitat Alteration Projects: 1998 Habitat Evaluation Surveys.

    SciTech Connect

    Bumgarner, Joseph D.

    1999-03-01

    The Asotin Creek Model Watershed Master Plan was completed 1994. The plan was developed by a landowner steering committee for the Asotin County Conservation District (ACCD), with technical support from the various Federal, State and local entities. Actions identified within the plan to improve the Asotin Creek ecosystem fall into four main categories, (1) Stream and Riparian, (2) Forestland, (3) Rangeland, and (4) Cropland. Specific actions to be carried out within the stream and in the riparian area to improve fish habitat were, (a) create more pools, (b) increase the amount of large organic debris (LOD), (c) increase the riparian buffer zone through tree planting, and (d) increase fencing to limit livestock access; additionally, the actions are intended to stabilize the river channel, reduce sediment input, and protect private property. Fish species of main concern in Asotin Creek are summer steelhead (Oncorhynchus mykiss), spring chinook (Oncorhynchus tshawytscha), and bull trout (Salvelinus confluentus). Spring chinook in Asotin Creek are considered extinct (Bumgarner et al. 1998); bull trout and summer steelhead are below historical levels and are currently as ''threatened'' under the ESA. In 1998, 16 instream habitat projects were planned by ACCD along with local landowners. The ACCD identified the need for a more detailed analysis of these instream projects to fully evaluate their effectiveness at improving fish habitat. The Washington Department of Fish and Wildlife's (WDFW) Snake River Lab (SRL) was contracted by the ACCD to take pre-construction measurements of the existing habitat (pools, LOD, width, depth, etc.) within each identified site, and to eventually evaluate fish use within these sites. All pre-construction habitat measurements were completed between 6 and 14 July, 1998. 1998 was the first year that this sort of evaluation has occurred. Post construction measurements of habitat structures installed in 1998, and fish usage evaluation, will be

  1. Libby/Hungry Horse Dams Wildlife Mitigation : Montana Wildlife Habitat Protection : Final Report.

    SciTech Connect

    Wood, Marilyn

    1992-12-01

    The purpose of this project was to develop and obtain information necessary to evaluate and undertake specific wildlife habitat protection/enhancement actions in northwest Montana as outlined in the Columbia River Basin Fish and Wildlife Program. Three waterfowl projects were evaluated between September 1989 and June 1990. Weaver's Slough project involved the proposed acquisition of 200 acres of irrigated farmland and a donated conservation easement on an additional 213 acres. The proposal included enhancement of the agricultural lands by conversion to upland nesting cover. This project was rated the lowest priority based on limited potential for enhancement and no further action was pursued. The Crow Creek Ranch project involved the proposed acquisition of approximately 1830 acres of grazing and dryland farming lands. The intent would be to restore drained potholes and provide adjacent upland nesting cover to increase waterfowl production. This project received the highest rating based on the immediate threat of subdivision, the opportunity to restore degraded wetlands, and the overall benefits to numerous species besides waterfowl. Ducks Unlimited was not able to participate as a cooperator on this project due to the jurisdiction concerns between State and tribal ownership. The USFWS ultimately acquired 1,550 acres of this proposed project. No mitigation funds were used. The Ashley Creek project involved acquisition of 870 acres adjacent to the Smith Lake Waterfowl Production Area. The primary goal was to create approximately 470 acres of wetland habitat with dikes and subimpoundments. This project was rated second in priority due to the lesser threat of loss. A feasibility analysis was completed by Ducks Unlimited based on a concept design. Although adequate water was available for the project, soil testing indicated that the organic soils adjacent to the creek would not support the necessary dikes. The project was determined not feasible for mitigation

  2. Expandable Lunar Habitat (X-Hab)

    NASA Image and Video Library

    2010-09-23

    Expandable Lunar Habitat (X-Hab).ILC Dover, under contract by NASA Langley Research Center, and in cooperation with NASA Johnson Space Center has designed and manufactured an expandable lunar habitat. This cylindrical habitat, or Expandable Lunar Habitat (X-Hab) is a hybrid system with two hard end caps and a deployable softgoods section in the center.

  3. Habitat mapping and interpretation in New England

    Treesearch

    William B. Leak

    1982-01-01

    Recommendations are given on the classification of forest land in New England on the basis of physiographic region, climate (elevation, latitude), mineralogy, and habitat. A habitat map for the Bartlett Experimental Forest in New Hampshire is presented based on land form, vegetation, and soil materials. For each habitat or group of habitats, data are presented on stand...

  4. New England wildlife: management forested habitats

    Treesearch

    Richard M. DeGraaf; Mariko Yamasaki; William B. Leak; John W. Lanier

    1992-01-01

    Presents silvicultural treatments for six major cover-type groups in New England to produce stand conditions that provide habitat opportunities for a wide range of wildlife species. Includes matrices for species occurrence and utilization by forested and nonforested habitats, habitat breadth and size class, and structural habitat features for the 338 wildlife species...

  5. Multpile Drivers of Hypoxia in a Central California Coastal Ecosystem Influence Fish Diversity and Estuarine Nursery Function

    NASA Astrophysics Data System (ADS)

    Hughes, B. B.; Levey, M. D.; Fountain, M. C.; Carlisle, A. B.; Chavez, F.; Gleason, M. G.

    2016-02-01

    Along the west coast of the United States, some coastal ecosystems experience hypoxia from both land-based (nutrient loading) and ocean-based (upwelling) drivers. Here we report on drivers of hypoxia from both the land and sea and the climatic factors that regulate hypoxia severity by combining multiple data sets of water quality, climate, and fish that span > 40 years in an estuarine ecosystem in central California, Elkhorn Slough. The combination of these multiple hypoxia drivers ultimately had consequences for flatfish habitat quality and nursery function of the estuary. Remarkably, despite intense and increasing nutrient loading from a watershed characterized by agriculture, the estuary displayed periods of resilience. Variation in dissolved oxygen in the lower part of the estuary, where nutrient loading is most severe, was driven not by nutrient loading, but by annual intensity in upwelling. Yet, variation in dissolved oxygen conditions in the upper part of the estuary was driven by climate, specifically El Niño years increased precipitation which alleviated poor dissolved oxygen conditions, likely due to increased flushing of organic material, a product of eutrophication. Areas of the estuary behind water control structures were characterized by persistent hypoxia, and were devoid of flatfish. In fully tidal sites of the estuary, fish diversity and juvenile flatfish abundance were driven by variation in hypoxia. Finally, hypoxic conditions in the flatfish nursery correlated with lag effects to recruitment and fishery landings for a model flatfish species, English sole (Parophrys vetulus), where > 50% of adults in the offshore fishery have been documented to use Elkhorn Slough as a nursery. These results highlight the importance of understanding the drivers and consequences of hypoxia from multiple sources.

  6. CADDIS Volume 2. Sources, Stressors and Responses: Physical Habitat

    EPA Pesticide Factsheets

    Introduction to the Physical Habitat module, when to list Physical Habitat as a candidate cause, ways to measure Physical Habitat, simple and detailed conceptual diagrams for Physical Habitat, Physical Habitat module references and literature reviews.

  7. Habitat Suitability Index Models: Eastern brown pelican

    USGS Publications Warehouse

    Hingtgen, Terrence M.; Mulholland, Rosemarie; Zale, Alexander V.

    1985-01-01

    A review and synthesis of existing information were used to develop a habitat model for the eastern brown pelican (Pelecanus occidentalis carolinensis). The model is scaled to produce an index of habitat suitability between 0 (unsuitable habitat) and 1.0 (optimal habitat) for coastal areas within the eastern brown pelican's breeding range. Habitat suitability indices are designed for use with the Habitat Evaluation Procedures previously developed by the U.S. Fish and Wildlife Service. Guidelines for application of the eastern brown pelican habitat model and techniques for measuring model variables are described.

  8. Habitat Suitability Index Models: Lewis' woodpecker

    USGS Publications Warehouse

    Sousa, Patrick J.

    1983-01-01

    This document is part of the Habitat Suitability Index (HSI) Model Series (FWS/OBS-82/10), which provides habitat information useful for impact assessment and habitat management. Several types of habitat i nformat i on are provided. The Habitat Use Information Section is largely constrained to those data that can be used to derive quantitative relationships between key environmental variables and habitat suitability. The habitat use information provides the foundation for HSI models that follow. In addition, this same information may be useful in the development of other models more appropriate to specific assessment or evaluation needs.

  9. Habitat Suitability Index Models: Common shiner

    USGS Publications Warehouse

    Trial, Joan G.; Wade, Charles S.; Stanley, Jon G.; Nelson, Patrick C.

    1983-01-01

    A review and synthesis of existing information were used to develop riverine and lacustrine habitat models for common shiner (Notropis cornutus). The models are scaled to produce an index of habitat suitability between 0 (unsuitable habitat) to 1 (optimally suitable habitat) for the northeastern range of the common shiner in North America. Habitat suitability indexes (HSI's) are designed for use with the habitat evaluation procedures developed by the U.S. Fish and Wildlife Service. Also included are discussions of Suitability Index (SI) curves as used in the Instream Flow Incremental Methodology (IFIM) and SI curves available for an IFIM analysis of smallmouth bass habitat.

  10. Habitat Suitability Index Models: Bigmouth buffalo

    USGS Publications Warehouse

    Edwards, Elizabeth A.

    1983-01-01

    A review and synthesis of existing information were used to develop riverine and lacustrine habitat models for Bigmouth buffalo (Ictiobus cyprinellus), a freshwater fish. The models are scaled to produce an indices of habitat suitability between 0 (unsuitable habitat) and 1 (optimally suitable habitat) for freshwater areas of the continental United States. Other habitat suitability models found in the literature are also included. Habitat suitability indices (HSI's) are designed for use with the habitat evaluation procedures developed by the U.S. Fish and Wildlife Service.

  11. Habitat Suitability Index Models: Snapping turtle

    USGS Publications Warehouse

    Graves, Brent M.; Anderson, Stanley H.

    1987-01-01

    A review and synthesis of existing information were used to develop a Habitat Suitability Index (HSI) model for the snapping turtle (Chelydra serpentina). The model consolidates habitat use information into a framework appropriate for field application, and is scaled to produce an index between 0.0 (unsuitable habitat) and 1.0 (optimum habitat). HSI models are designed to be used with Habitat Evaluation Procedures previously developed by the U.S. Fish and Wildlife Service.

  12. Habitat Suitability Index Models: Belted kingfisher

    USGS Publications Warehouse

    Prose, Bart L.

    1985-01-01

    A review and synthesis of existing information were used to develop a Habitat Suitability Index (HSI) model for the belted kingfisher (Ceryle alcyon). The model consolidates habitat use information into a framework appropriate for field application, and is scaled to produce an index between 0.0 (unsuitable habitat) to 1.0 (optimum habitat). HSI models are designed to be used with Habitat Evaluation Procedures previously developed by the U.S. Fish and Wildlife Service.

  13. Habitat Suitability Index Models: Gray squirrel

    USGS Publications Warehouse

    Allen, Arthur W.

    1987-01-01

    A review and synthesis of existing information were used to develop a Habitat Suitability Index (HSI) model for the gray squirrel (Sciurus carolinensis). The model consolidates habitat use information into a framework appropriate for field application, and is scaled to produce an index between 0.0 (unsuitable habitat) and 1.0 (optimum habitat). HSI models are designed to be used with Habitat Evaluation Procedures previously developed by U.S. Fish and Wildlife Service.

  14. Habitat Suitability Index Models: Slider turtle

    USGS Publications Warehouse

    Morreale, Stephen J.; Gibbons, J. Whitfield

    1986-01-01

    A review and synthesis of existing information were used to develop a Habitat Suitability Index (HSI) model for the slider turtle (Pseudemys scripta). The model consolidates habitat use information into a framework appropriate for field application and is scaled to produce an index between 0.0 (unsuitable habitat) and 1.0 (optimum habitat). HSI models are designed to be used with Habitat Evaluation Procedures previously developed by the U.S. Fish and Wildlife Service.

  15. Habitat Suitability Index Models: Hairy woodpecker

    USGS Publications Warehouse

    Sousa, Patrick J.

    1987-01-01

    A review and synthesis of existing information were used to develop a Habitat Suitability Index (HSI) model for the hairy woodpecker (Picoides villosus). The model consolidates habitat use information into a framework appropriate for field application, and is scaled to produce an index between 0.0 (unsuitable habitat) to 1.0 (optimum habitat). HSI models are designed to be used with Habitat Evaluation Procedures previously developed by the U.S. Fish and Wildlife Service.

  16. Habitat Suitability Index Models: Brown thrasher

    USGS Publications Warehouse

    Cade, Brian S.

    1986-01-01

    A review and synthesis of existing information were used to develop a Habitat Suitability Index (HSI) model for the brown thrasher (Toxostoma rufum). The model consolidates habitat use information into a framework appropriate for field application, and is scaled to produce an index between 0.0 (unsuitable habitat) to 1.0 (optimum habitat). HSI models are designed to be used with Habitat Evaluation Procedures previously developed by the U.S. Fish and Wildlife Service.

  17. Habitat Suitability Index Models: Swamp rabbit

    USGS Publications Warehouse

    Allen, Arthur W.

    1985-01-01

    A review and synthesis of existing information were used to develop a Habitat Suitability Index (HSI) model for the swamp rabbit (Sylvilagus aquaticus). The model consolidates habitat use information into a framework appropriate for field application, and is scaled to produce an index between 0.0 (unsuitable habitat) to 1.0 (optimum habitat). HSI models are designed to be used with Habitat Evaluation Procedures previously developed by the U.S. Fish and Wildlife Service.

  18. Habitat Suitability Index Models: Pine warbler

    USGS Publications Warehouse

    Schroeder, Richard L.

    1982-01-01

    Habitat preferences of the pine warbler (Dendroica pinus) are described in this publication, which is one of a series of Habitat Suitability Index (HSI) models. Habitat use information is presented in a synthesis of the literature on the species-habitat requirements of the pine warbler, followed by the development of the HSI model. The model is presented in three formats: graphic, word, and mathematical, and is designed to provide information for use in impact assessment and habitat management activities.

  19. Habitat Suitability Index Models: Eastern meadowlark

    USGS Publications Warehouse

    Schroeder, Richard L.; Sousa, Patrick J.

    1982-01-01

    Habitat preferences of the eastern meadowlark (Sturnella magna) are described in this publication, which is one of a series of Habitat Suitability Index (HSI) models. Habitat use information is presented in a synthesis of the literature on the species-habitat requirements of the eastern meadowlark, followed by the development of the HSI model. The model is presented in three formats: graphic, word, and mathematical, and is designed to provide information for use in impact assessment and habitat management activities.

  20. Habitat Suitability Index Models: Cactus wren

    USGS Publications Warehouse

    Short, Henry L.

    1985-01-01

    A review and synthesis of existing information were used to develop a Habitat Suitability Index (HSI) model for the cactus wren (Campylorhynchus brunneicapillus). The model consolidates habitat use information into a framework appropriate for field application, and is scaled to produce an index between 0.0 (unsuitable habitat) to 1.0 (optimum habitat). HSI models are designed to be used with Habitat Evaluation Procedures previously developed by the U.S. Fish and Wildlife Service.

  1. Habitat Suitability Index Models: Spotted owl

    USGS Publications Warehouse

    Laymon, Stephen A.; Salwasser, Hal; Barrett, Reginald H.

    1985-01-01

    A review and synthesis of existing information were used to develop a Habitat Suitability Index (HSI) model for the spotted owl (Strix occidentalis). The model consolidates habitat use information into a framework appropriate for field application, and is scaled to produce an index between 0.0 (unsuitable habitat) to 1.0 (optimum habitat). HSI models are designed to be used with Habitat Evaluation Procedures previously developed by the U.S. Fish and Wildlife Service.

  2. Habitat Suitability Index Models: Snowshoe hare

    USGS Publications Warehouse

    Carreker, Raymond G.

    1985-01-01

    A review and synthesis of existing information were used to develop a Habitat Suitability Index (HSI) model for the Snowshoe hare (Lepus americanus). The model consolidates habitat use information into a framework appropriate for field application, and is scaled to produce an index between 0.0 (unsuitable habitat) to 1.0 (optimum habitat). HSI models are designed to be used with Habitat Evaluation Procedures previously developed by the U.S. Fish and Wildlife Service.

  3. Determining habitat quality for species that demonstrate dynamic habitat selection

    USGS Publications Warehouse

    Beerens, James M.; Frederick, Peter C; Noonburg, Erik G; Gawlik, Dale E.

    2015-01-01

    Determining habitat quality for wildlife populations requires relating a species' habitat to its survival and reproduction. Within a season, species occurrence and density can be disconnected from measures of habitat quality when resources are highly seasonal, unpredictable over time, and patchy. Here we establish an explicit link among dynamic selection of changing resources, spatio-temporal species distributions, and fitness for predictive abundance and occurrence models that are used for short-term water management and long-term restoration planning. We used the wading bird distribution and evaluation models (WADEM) that estimate (1) daily changes in selection across resource gradients, (2) landscape abundance of flocks and individuals, (3) conspecific foraging aggregation, and (4) resource unit occurrence (at fixed 400 m cells) to quantify habitat quality and its consequences on reproduction for wetland indicator species. We linked maximum annual numbers of nests detected across the study area and nesting success of Great Egrets (Ardea alba), White Ibises (Eudocimus albus), and Wood Storks (Mycteria americana) over a 20-year period to estimated daily dynamics of food resources produced by WADEM over a 7490 km2 area. For all species, increases in predicted species abundance in March and high abundance in April were strongly linked to breeding responses. Great Egret nesting effort and success were higher when birds also showed greater conspecific foraging aggregation. Synthesis and applications: This study provides the first empirical evidence that dynamic habitat selection processes and distributions of wading birds over environmental gradients are linked with reproductive measures over periods of decades. Further, predictor variables at a variety of temporal (daily-multiannual) resolutions and spatial (400 m to regional) scales effectively explained variation in ecological processes that change habitat quality. The process used here allows managers to develop

  4. Habitat destruction in mutualistic metacommunities.

    PubMed

    Prakash, Sona; de Roos, André M

    2004-03-01

    We investigate a mutualistic metacommunity where the strength of the mutualistic interaction between species is measured by the extent to which the presence of one species on a patch either reduces the extinction rate of the others present on the same patch or increases their ability to colonize other patches. In both cases, a strong enough mutualism enables all species to persist at habitat densities where they would all be extinct in the absence of the interaction. However, a mutualistic interaction that enhances colonization enables the species to persist at lower habitat density than one that suppresses extinction. All species abruptly go extinct (catastrophe) when the habitat density is decreased infinitesimally below a critical value. A comparison of the mean field or spatially implicit case with unrestricted dispersal and colonization to all patches in the system with a spatially explicit case where dispersal is restricted to the immediate neighbours of the original patch leads to the intriguing conclusion that restricted dispersal can be favourable for species that have a beneficial effect on each other when habitat conditions are adverse. When the mutualistic interaction is strong enough, the extinction threshold or critical amount of habitat required for the persistence of all species is lower when the dispersal is locally restricted than when unrestricted ! The persistence advantage for all species created by the mutualistic interaction increases substantially with the number of species in the metacommunity, as does the advantage for restricted dispersal over global dispersal.

  5. Concepts for manned lunar habitats

    NASA Technical Reports Server (NTRS)

    Hypes, W. D.; Butterfield, A. J.; King, C. B.; Qualls, G. D.; Davis, W. T.; Gould, M. J.; Nealy, J. E.; Simonsen, L. C.

    1991-01-01

    The design philosophy that will guide the design of early lunar habitats will be based on a compromise between the desired capabilities of the base and the economics of its development and implantation. Preferred design will be simple, make use of existing technologies, require the least amount of lunar surface preparation, and minimize crew activity. Three concepts for an initial habitat supporting a crew of four for 28 to 30 days are proposed. Two of these are based on using Space Station Freedom structural elements modified for use in a lunar-gravity environment. A third concept is proposed that is based on an earlier technology based on expandable modules. The expandable modules offer significant advantages in launch mass and packaged volume reductions. It appears feasible to design a transport spacecraft lander that, once landed, can serve as a habitat and a stand-off for supporting a regolith environmental shield. A permanent lunar base habitat supporting a crew of twelve for an indefinite period can be evolved by using multiple initial habitats. There appears to be no compelling need for an entirely different structure of larger volume and increased complexity of implantation.

  6. The role of ocean tides on groundwater-surface water exchange in a mangrove-dominated estuary: Shark River Slough, Florida Coastal Everglades, USA

    USGS Publications Warehouse

    Smith, Christopher G.; Price, René M.; Swarzenski, Peter W.; Stalker, Jeremy C.

    2016-01-01

    Low-relief environments like the Florida Coastal Everglades (FCE) have complicated hydrologic systems where surface water and groundwater processes are intimately linked yet hard to separate. Fluid exchange within these lowhydraulic-gradient systems can occur across broad spatial and temporal scales, with variable contributions to material transport and transformation. Identifying and assessing the scales at which these processes operate is essential for accurate evaluations of how these systems contribute to global biogeochemical cycles. The distribution of 222Rn and 223,224,226Ra have complex spatial patterns along the Shark River Slough estuary (SRSE), Everglades, FL. High-resolution time-series measurements of 222Rn activity, salinity, and water level were used to quantify processes affecting radon fluxes out of the mangrove forest over a tidal cycle. Based on field data, tidal pumping through an extensive network of crab burrows in the lower FCE provides the best explanation for the high radon and fluid fluxes. Burrows are irrigated during rising tides when radon and other dissolved constituents are released from the mangrove soil. Flushing efficiency of the burrows—defined as the tidal volume divided by the volume of burrows— estimated for the creek drainage area vary seasonally from 25 (wet season) to 100 % (dry season) in this study. The tidal pumping of the mangrove forest soil acts as a significant vector for exchange between the forest and the estuary. Processes that enhance exchange of O2 and other materials across the sediment-water interface could have a profound impact on the environmental response to larger scale processes such as sea level rise and climate change. Compounding the material budgets of the SRSE are additional inputs from groundwater from the Biscayne Aquifer, which were identified using radium isotopes. Quantification of the deep groundwater component is not obtainable, but isotopic data suggest a more prevalent signal in the dry

  7. Factors affecting marsh vegetation at the Liberty Island Conservation Bank in the Cache Slough region of the Sacramento–San Joaquin Delta, California

    USGS Publications Warehouse

    Orlando, James L.; Drexler, Judith Z.

    2017-07-07

    The Liberty Island Conservation Bank (LICB) is a tidal freshwater marsh restored for the purpose of mitigating adverse effects on sensitive fish populations elsewhere in the region. The LICB was completed in 2012 and is in the northern Cache Slough region of the Sacramento–San Joaquin Delta. The wetland vegetation at the LICB is stunted and yellow-green in color (chlorotic) compared to nearby wetlands. A study was done to investigate three potential causes of the stunted and chlorotic vegetation: (1) improper grading of the marsh plain, (2) pesticide contamination from agricultural and urban inputs upstream from the site, (3) nitrogen-deficient soil, or some combination of these. Water samples were collected from channels at five sites, and soil samples were collected from four wetlands, including the LICB, during the summer of 2015. Real-time kinematic global positioning system (RTK-GPS) elevation surveys were completed at the LICB and north Little Holland Tract, a closely situated natural marsh that has similar hydrodynamics as the LICB, but contains healthy marsh vegetation.The results showed no significant differences in carbon or nitrogen content in the surface soils or in pesticides in water among the sites. The elevation survey indicated that the mean elevation of the LICB was about 26 centimeters higher than that of the north Little Holland Tract marsh. Because marsh plain elevation largely determines the hydroperiod of a marsh, these results indicated that the LICB has a hydroperiod that differs from that of neighboring north Little Holland Tract marsh. This difference in hydroperiod contributed to the lower stature and decreased vigor of wetland vegetation at the LICB. Although the LICB cannot be regraded without great expense, it could be possible to reduce the sharp angle of the marsh edge to facilitate deeper and more frequent tidal flooding along the marsh periphery. Establishing optimal elevations for restored wetlands is necessary for obtaining

  8. Wildlife habitats in managed rangelands—the Great Basin of southeastern Oregon: manmade habitats.

    Treesearch

    Chris Maser; Jack Ward Thomas; Ira David Luman; Ralph. Anderson

    1979-01-01

    Manmade structures on rangelands provide specialized habitats for some species. These habitats and how they function as specialized habitat features are examined in this publication. The relationships of the wildlife of the Great Basin to such structures are detailed.

  9. Loss and modification of habitat

    USGS Publications Warehouse

    Lemckert, Francis; Hecnar, Stephen; Pilliod, David S.; Wilkinson, John W.; Heatwole, Harold

    2012-01-01

    Amphibians live in a wide variety of habitats around the world, many of which have been modified or destroyed by human activities. Most species have unique life history characteristics adapted to specific climates, habitats (e.g., lentic, lotic, terrestrial, arboreal, fossorial, amphibious), and local conditions that provide suitable areas for reproduction, development and growth, shelter from environmental extremes, and predation, as well as connectivity to other populations or habitats. Although some species are entirely aquatic or terrestrial, most amphibians, as their name implies, lead a dual life and require a mosaic of habitats in both aquatic and terrestrial ecosystems. With over 6 billion people on Earth, most species are now persisting in habitats that have been directly or indirectly influenced by human activities. Some species have disappeared where their habitats have been completely destroyed, reduced, or rendered unsuitable. Habitat loss and degradation are widely considered by most researchers as the most important causes of amphibian population decline globally (Barinaga 1990; Wake and Morowitz 1991; Alford and Richards 1999). In this chapter, a background on the diverse habitat requirements of amphibians is provided, followed by a discussion of the effects of urbanization, agriculture, livestock grazing, timber production and harvesting, fire and hazardous fuel management, and roads on amphibians and their habitats. Also briefly discussed is the influence on amphibian habitats of natural disturbances, such as extreme weather events and climate change, given the potential for human activities to impact climate in the longer term. For amphibians in general, microhabitats are of greater importance than for other vertebrates. As ectotherms with a skin that is permeable to water and with naked gelatinous eggs, amphibians are physiologically constrained to be active during environmental conditions that provide appropriate body temperatures and adequate

  10. Umatilla Basin Habitat Improvement Project.

    SciTech Connect

    Bailey, Timothy D.

    1990-01-01

    This annual report is in fulfillment of contract obligations with Bonneville Power Administration which is the funding source for the Oregon Department of Fish and Wildlife's Umatilla Basin Habitat Improvement Project. The major activities undertaken during this report period were: procurement of 17 cooperative lease agreements with private landowners, design and layout of 8.6 miles of riparian exclosure fence and 3.0 miles of instream structures, development of five fencing contracts and six instream work contracts. Results include implementation of 10 miles of fencing and 3 miles of instream work. Other activities undertaken during this report period are: data collection from 90 habitat monitoring transects, collection and summarization of temperature data, photopoint establishment, coordination with numerous agencies and tribes and education of all age groups on habitat improvement and protection. 4 refs., 4 figs., 6 tabs.

  11. Lunar Habitat Airlock/Suitlock

    NASA Technical Reports Server (NTRS)

    Griffin, Brand Norman

    2008-01-01

    Airlocks for lunar Extravehicular Activity (EVA) will be significantly different than previous designs. Until now, airlocks operated infrequently and only in the "clean" weightless environment, but lunar airlocks are planned to be used much more often (every other day) in a dusty, gravity environment. Concepts for airlocks were analyzed by the NASA, JSC Habitability Focus Element during recent lunar outpost studies. Three airlock types were identified; an Airlock (AL) or independent pressure vessel with one hatch to the outside and the other to the Habitat. A Suitlock (SL) which shares a pressure bulkhead with the Habitat allowing rear-entry suits to remain on the dusty side while the crew enters/exits the Habitat. The third option is the Suitport (SP) which offers direct access from the habitable volume into an externally mounted suit. The SP concept was not compared, however between the AL and SL, the AL was favored.

  12. Habitat Suitability Index Models: Mink

    USGS Publications Warehouse

    Allen, Arthur W.

    1983-01-01

    The mink (Mustela vison) is a predatory, semiaquatic mammal that is generally associated with stream and river banks, lake shores, fresh and saltwater marshes, and marine shore habitats (Gerell 1970).  Mink are chiefly nocturnal and remain active throughout the year (Marshall 1936); Gerell 1969; Burgess 1978).  The species is adaptable in its use of habitat, modifying daily habits according to environmental conditions, particularly prey availability (Wise et al. 1981; Linn and Birds 1981; Birks and Linn 1982).  The species is tolerant of human activity and will inhabit suboptimum habitats as long as an adequate food source is available; however, mink will be more mobile and change home ranges more frequently under such conditions (Linn pers. comm.).

  13. Habitat suitability index models: Black crappie

    USGS Publications Warehouse

    Edwards, Elizabeth A.; Krieger, Douglas A.; Bacteller, Mary; Maughan, O. Eugene

    1982-01-01

    Characteristics and habitat requirements of the black crappie (Pomoxis nigromaculatus) are described in a review of Habitat Suitability Index models. This is one in a series of publications to provide information on the habitat requirements of selected fish and wildlife species. Numerous literature sources have been consulted in an effort to consolidate scientific data on species-habitat relationships. These data have subsequently been synthesized into explicit Habitat Suitability Index (HSI) models. The models are based on suitability indices indicating habitat preferences. Indices have been formulated for variables found to affect the life cycle and survival of each species. Habitat Suitability Index (HSI) models are designed to provide information for use in impact assessment and habitat management activities. The HSI technique is a corollary to the U.S. Fish and Wildlife Service's Habitat Evaluation Procedures.

  14. Geomorphology and Sustainable Subsistence Habitats

    NASA Astrophysics Data System (ADS)

    Johnson, A. C.; Kruger, L. E.

    2016-02-01

    Climatic, tectonic, and human-related impacts are changing the distribution of shoreline habitats and associated species used as food resources. There is a need to summarize current and future shoreline geomorphic - biotic relationships and better understand potential impacts to native customary and traditional gathering patterns. By strategically integrating Native knowledge and observations, we create an inclusive vulnerability assessment strategy resulting in a win-win opportunity for resource users and research scientists alike. We merged the NOAA ShoreZone database with results from over sixty student intern discussions in six southeast Alaska Native communities. Changes in shore width and unit length were derived using near shore bathymetry depths and available isostatic rebound, tectonic movement, and rates of sea level rise. Physical attributes including slope, substrate, and exposure were associated with presence and abundance of specific species. Student interns, selected by Tribes and Tribal associations, conducted resource-based discussions with community members to summarize species use, characteristics of species habitat, transportation used to access collection areas, and potential threats to habitats. Geomorphic trends and community observations were summarized to assess potential threats within a spatial context. Given current measured rates of uplift and sea level rise, 2.4 to 0 m of uplift along with 0.20 m of sea level rise is expected in the next 100 years. Coastlines of southeast Alaska will be subject to both drowning (primarily to the south) and emergence (primarily to the north). We predict decreases in estuary and sediment-dominated shoreline length and an increase in rocky habitats. These geomorphic changes, combined with resident's concerns, highlight six major interrelated coastal vulnerabilities including: (1) reduction of clam and clam habitat quantity and quality, (2) reduction in chiton quality and quantity, (3) harmful expansion of

  15. Habitat classification modelling with incomplete data: Pushing the habitat envelope

    Treesearch

    Phoebe L. Zarnetske; Thomas C. Edwards; Gretchen G. Moisen

    2007-01-01

    Habitat classification models (HCMs) are invaluable tools for species conservation, land-use planning, reserve design, and metapopulation assessments, particularly at broad spatial scales. However, species occurrence data are often lacking and typically limited to presence points at broad scales. This lack of absence data precludes the use of many statistical...

  16. Habitat Suitability Index Models: Laughing gull

    USGS Publications Warehouse

    Zale, Alexander V.; Mulholland, Rosemarie

    1985-01-01

    A review and synthesis of existing information were used to develop a habitat model for laughing gull (Larus atricilla). The model is scaled to produce an index of habitat suitability between 0 (unsuitable habitat) and 1.0 (optimally suitable habitat) for areas along the Gulf of Mexico coast. Habitat suitability indices are designed for use with the Habitat Evaluation Procedures previously developed by the U.S. Fish and Wildlife Service. Guidelines for application of the model and techniques for measuring model variables are described.

  17. Habitat Suitability Index Models: Lesser scaup (wintering)

    USGS Publications Warehouse

    Mulholland, Rosemarie

    1985-01-01

    A review and synthesis of existing information were used to develop a model for evaluating wintering habitat quality for the lesser scaup (Aythya affinis). The model is scaled to produce an index of habitat suitability between 0.0 (unsuitable habitat) to 1.0 (optimal habitat) for Southern Atlantic and Gulf of Mexico coastal areas of the continental United States. Habitat suitability indices are designed for use with the Habitat Evaluation Procedures previously developed by the U.S. Fish and Wildlife Service Guidelines for model application and techniques for measuring model variables are provided.

  18. Habitat Suitability Index Models: Red king crab

    USGS Publications Warehouse

    Jewett, Stephen C.; Onuf, Christopher P.

    1988-01-01

    A review and synthesis of existing information were used to develop a Habitat Suitability Index (HSI) model for evaluating habitat of different life stages of red king crab (Paralithodes camtschatica). A model consolidates habitat use information into a framework appropriate for field application, and is scaled to produce an index between 0.0 (unsuitable habitat) and 1.0 (optimum habitat) in Alaskan coastal waters, especially in the Gulf of Alaska and the southeastern Bering Sea. HSI models are designed to be used with Habitat Evaluation Procedures previously developed by the U.S. Fish and Wildlife Service.

  19. Microbial Habitat on Kilimanjaro's Glaciers

    NASA Astrophysics Data System (ADS)

    Ponce, A.; Beaty, S. M.; Lee, C.; Lee, C.; Noell, A. C.; Stam, C. N.; Connon, S. A.

    2011-03-01

    Kilimanjaro glaciers captured a history of microbial diversity and abundance of supraglacial habitats. We show that a majority of bacterial clones, as determined by bacterial 16S rRNA gene sequencing, are most closely related to those isolated from cold-water environments.

  20. Oak woodlands as wildlife habitat

    Treesearch

    W. Tietje; K. Purcell; S. Drill

    2005-01-01

    This chapter provides local planners and policymakers with information on the diversity and abundance of oak woodland wildlife, wildlife habitat needs, and how local planning activities can influence wildlife abundance and diversity. Federal and state laws, particularly the federal and California Endangered Species Act and the California Environmental Quality Act (CEQA...

  1. Habitat Suitability Index Models: Brook trout

    USGS Publications Warehouse

    Raleigh, Robert F.

    1982-01-01

    The habitat use information and Habitat Suitability Index (HSI) models presented in this document are an aid for impact assessment and habitat management activities. Literature concerning a species' habitat requirements and preferences is reviewed and then synthesized into HSI models, which are scaled to produce an index between 0 (unsuitable habitat) and 1 (optimal habitat). Assumptions used to transform habitat use information into these mathematical models are noted, and guidelines for model application are described. Any models found in the literature which may also be used to calculate an HSI are cited, and simplified HSI models, based on what the authors believe to be the most important habitat characteristics for this species, are presented.

  2. FUTURE SCENARIOS OF CHANGE IN WILDLIFE HABITAT

    EPA Science Inventory

    Studies in Pennsylvania, Iowa, California, and Oregon show varying losses of terrestrial wildlife habitat in scenarios based on different assumptions about future human land use patterns. Retrospective estimates of losses of habitat since Euro-American settlement in several stud...

  3. White Lake AOC Habitat Restoration Project

    EPA Pesticide Factsheets

    The Muskegon Conservation District and the White Lake Public Advisory Council in 2012 completed the White Lake AOC Shoreline Habitat Restoration Project to address the loss of shoreline and nearshore habitat.

  4. Habitat Suitability Index Models: Rainbow trout

    USGS Publications Warehouse

    Raleigh, Robert F.; Hickman, Terry; Solomon, R. Charles; Nelson, Patrick C.

    1984-01-01

    A review and synthesis of existing information were used to develop riverine and lacustrine habitat models for rainbow trout (Salmo gairdneri), a freshwater species. The models are scaled to produce an index of habitat suitability between 0 (unsuitable habitat) to 1 (optimally suitable habitat) for freshwater areas of the continental United States. Other habitat suitability models found in the literature are also included. Habitat suitability indexes (HSI's) are designed for use with the habitat evaluation procedures developed by the U.S. Fish and Wildlife Service. Also included are discussions of Suitability Index (SI) curves as used in the Instream Flow Incremental Methodology (IFIM) and SI curves available for an IFIM analysis of Fallfish habitat.

  5. Contributions of Estuarine Habitats to Major Fisheries

    EPA Science Inventory

    Estuaries provide unique habitat conditions that are essential to the production of major fisheries throughout the world, but quantitatively demonstrating the value of these habitats to fisheries presents some difficult problems. The questions are important, because critical hab...

  6. Contributions of Estuarine Habitats to Major Fisheries

    EPA Science Inventory

    Estuaries provide unique habitat conditions that are essential to the production of major fisheries throughout the world, but quantitatively demonstrating the value of these habitats to fisheries presents some difficult problems. The questions are important, because critical hab...

  7. Habitats: Making Homes for Animals and Plants.

    ERIC Educational Resources Information Center

    Hickman, Pamela M.

    This book of activities is designed to supplement a child's outdoor experiences and to encourage children to take a closer look at nature by creating temporary mini-habitats at home or in school. An introduction explains to students the concept of habitat and the responsibilities of keeping a mini-habitat. The remainder of the book contains…

  8. A technical guide for monitoring wildlife habitat

    Treesearch

    M.M. Rowland; C.D. Vojta

    2013-01-01

    Information about status and trend of wildlife habitat is important for the U.S. Department of Agriculture, Forest Service to accomplish its mission and meet its legal requirements. As the steward of 193 million acres (ac) of Federal land, the Forest Service needs to evaluate the status of wildlife habitat and how it compares with desired conditions. Habitat monitoring...

  9. Forest habitat types of central Idaho

    Treesearch

    Robert Steele; Robert D. Pfister; Russell A. Ryker; Jay A. Kittams

    1981-01-01

    A land-classification system based upon potential natural vegetation is presented for the forests of central Idaho. It is based on reconnaissance sampling of about 800 stands. A hierarchical taxonomic classification of forest sites was developed using the habitat type concept. A total of eight climax series, 64 habitat types, and 55 additional phases of habitat types...

  10. Chapter 6. Landscape Analysis for Habitat Monitoring

    Treesearch

    Samuel A. Cushman; Kevin McGarigal; Kevin S. McKelvey; Christina D. Vojta; Claudia M. Regan

    2013-01-01

    The primary objective of this chapter is to describe standardized methods for measur¬ing and monitoring attributes of landscape pattern in support of habitat monitoring. This chapter describes the process of monitoring categorical landscape maps in which either selected habitat attributes or different classes of habitat quality are represented as different patch types...

  11. JUVENILE BAY SCALLOP (ARGOPECTEN IRRADIANS) HABITAT PREFERENCES

    EPA Science Inventory

    Habitat quality and quantity are known to be important for maintaining populations of bay scallops (Argopecten irradians), but data linking habitat attributes to bay scallop populations are lacking. This information is essential to understand the role of habitat alteration in th...

  12. JUVENILE BAY SCALLOP (ARGOPECTEN IRRADIANS) HABITAT PREFERENCES

    EPA Science Inventory

    Habitat quality and quantity are known to be important for maintaining populations of bay scallops (Argopecten irradians), but data linking habitat attributes to bay scallop populations are lacking. This information is essential to understand the role of habitat alteration in th...

  13. Habitats: Making Homes for Animals and Plants.

    ERIC Educational Resources Information Center

    Hickman, Pamela M.

    This book of activities is designed to supplement a child's outdoor experiences and to encourage children to take a closer look at nature by creating temporary mini-habitats at home or in school. An introduction explains to students the concept of habitat and the responsibilities of keeping a mini-habitat. The remainder of the book contains…

  14. Habitat-specific Tradeoffs Between Risk of Flow-induced Dislodgment and Fish Predation Affect Shell Morphologies of Potamopyrgus antipodarum in New Zealand

    NASA Astrophysics Data System (ADS)

    Holomuzki, J. R.; Biggs, B. J.

    2005-05-01

    Smooth and spiny shell-morphs exist in populations of the mudsnail Potamopyrgus antipodarum in New Zealand streams and lakes. We estimated the relative frequencies of smooth and spiny shell-morphs from 11 rivers and 9 lakes on the South Island and used stepwise regression to identify environmental variables that affected shell-morph frequencies. Habitat (stream or lake) explained 57% of the variation in morph frequency. Nearly 70% of snails in streams were smooth-shelled, whereas >80% of snails in lakes were spiny. Results from flow tank experiments showed that spines collected seston (sloughing algae and leaf matter) at current speeds <40 cm/s, making spiny-morphs more prone to flow-induced dislodgment than smooth-morphs. Moreover, individuals with longer spines collected more seston, and hence were more susceptible to dislodgment, than those with shorter ones. However, an advantage of spines was lower predation rates by common bullies (Gobiomorphus cotidianus), a widespread benthic fish in New Zealand streams and lakes. All snails egested by bullies were dead, suggesting common bullies may help regulate mudsnail populations in nature. Our results suggest tradeoffs between susceptibility to flow-induced dislodgment and fish predation affect habitat-specific frequencies of shell morphologies for this snail.

  15. Habitat use and habitat overlap of riparian birds in three elevational zones

    Treesearch

    Deborah M. Finch

    1989-01-01

    I examined patterns of variance in habitat use and habitat overlap in 20 breeding bird species found along a riparian vegetational gradient in southeastern Wyoming to test whether habitat use in species differed (1) from availability of random habitat resources, (2) among elevational zones, and (3) between species that inhabited only one zone and species that occupied...

  16. Quantifying consistent individual differences in habitat selection.

    PubMed

    Leclerc, Martin; Vander Wal, Eric; Zedrosser, Andreas; Swenson, Jon E; Kindberg, Jonas; Pelletier, Fanie

    2016-03-01

    Habitat selection is a fundamental behaviour that links individuals to the resources required for survival and reproduction. Although natural selection acts on an individual's phenotype, research on habitat selection often pools inter-individual patterns to provide inferences on the population scale. Here, we expanded a traditional approach of quantifying habitat selection at the individual level to explore the potential for consistent individual differences of habitat selection. We used random coefficients in resource selection functions (RSFs) and repeatability estimates to test for variability in habitat selection. We applied our method to a detailed dataset of GPS relocations of brown bears (Ursus arctos) taken over a period of 6 years, and assessed whether they displayed repeatable individual differences in habitat selection toward two habitat types: bogs and recent timber-harvest cut blocks. In our analyses, we controlled for the availability of habitat, i.e. the functional response in habitat selection. Repeatability estimates of habitat selection toward bogs and cut blocks were 0.304 and 0.420, respectively. Therefore, 30.4 and 42.0 % of the population-scale habitat selection variability for bogs and cut blocks, respectively, was due to differences among individuals, suggesting that consistent individual variation in habitat selection exists in brown bears. Using simulations, we posit that repeatability values of habitat selection are not related to the value and significance of β estimates in RSFs. Although individual differences in habitat selection could be the results of non-exclusive factors, our results illustrate the evolutionary potential of habitat selection.

  17. Subsurface microbial habitats on Mars

    NASA Technical Reports Server (NTRS)

    Boston, P. J.; Mckay, C. P.

    1991-01-01

    We developed scenarios for shallow and deep subsurface cryptic niches for microbial life on Mars. Such habitats could have considerably prolonged the persistence of life on Mars as surface conditions became increasingly inhospitable. The scenarios rely on geothermal hot spots existing below the near or deep subsurface of Mars. Recent advances in the comparatively new field of deep subsurface microbiology have revealed previously unsuspected rich aerobic and anaerobic microbal communities far below the surface of the Earth. Such habitats, protected from the grim surface conditions on Mars, could receive warmth from below and maintain water in its liquid state. In addition, geothermally or volcanically reduced gases percolating from below through a microbiologically active zone could provide the reducing power needed for a closed or semi-closed microbial ecosystem to thrive.

  18. Alligator, Alligator mississippiensis, habitat suitability index model

    USGS Publications Warehouse

    Waddle, Hardin

    2017-01-01

    The 2012 Coastal Master Plan utilized Habitat Suitability Indices (HSIs) to evaluate potential project effects on wildlife species. Even though HSIs quantify habitat condition, which may not directly correlate to species abundance, they remain a practical and tractable way to assess changes in habitat quality from various restoration actions. As part of the legislatively mandated five year update to the 2012 plan, the wildlife habitat suitability indices were updated and revised using literature and existing field data where available. The outcome of these efforts resulted in improved, or in some cases entirely new suitability indices. This report describes the development of the habitat suitability indices for the American alligator, Alligator mississippiensis.

  19. Habitat Suitability Index Models: American alligator

    USGS Publications Warehouse

    Newsom, John D.; Joanen, Ted; Howard, Rebecca J.

    1987-01-01

    A review and synthesis of existing information were used to develop a model for evaluating American alligator habitat quality. The model is applicable in marshes along the northern Gulf of Mexico. It is scaled to produce an index between 0 (unsuitable habitat) and 1.0 (optimal habitat). Habitat suitability index models are designed for use with the Habitat Evaluation Procedures previously developed by the U.S. Fish and Wildlife Service. Guidelines for model application and techniques for measuring model variables are described.

  20. Carpinteria salt marsh habitat polygons

    USGS Publications Warehouse

    Lafferty, Kevin D.; Dunham, Eleca J.; Mancini, Frank T.; Stewart, Tara E.; Hechinger, Ryan F.

    2017-01-01

    We identified five common habitat types in Carpinteria Salt Marsh: channels, pans (flats), marsh, salt flat and upland.  We then drew polygons around each habitat type identified from a registered and orthorectified aerial photograph and created a GIS shapefile. Polygons were ground-truthed in the field. From these habitat polygons, one can use GIS applications to estimate the area of each habitat type in this estuary. These data support the following publications: Kuris, Armand M., et al. "Ecosystem energetic implications of parasite and free-living biomass in three estuaries." Nature 454.7203 (2008): 515-518.Hechinger, Ryan F., Kevin D. Lafferty, Andy P. Dobson, James H. Brown, and Armand M. Kuris. "A common scaling rule for abundance, energetics, and production of parasitic and free-living species." Science 333, no. 6041 (2011): 445-448.Hechinger, Ryan F., Kevin D. Lafferty, John P. McLaughlin, Brian L. Fredensborg, Todd C. Huspeni, Julio Lorda, Parwant K. Sandhu et al. "Food webs including parasites, biomass, body sizes, and life stages for three California/Baja California estuaries." Ecology 92, no. 3 (2011): 791-791.Buck, J.C., Hechinger, R.F., Wood, A.C., Stewart, T.E., Kuris, A.M., and Lafferty, K.D., "Host density increases parasite recruitment but decreases host risk in a snail-trematode system." Manuscript submitted for publication. Lafferty, K.D., Stewart, T.E., and Hechinger, R.F. (in press). Bird distribution surveys at Carpinteria Salt Marsh, California USA, January 2012 to March 2013: U.S. Geological Survey data release, http://dx.doi.org/10.5066/F7F47M95. 

  1. Ecology and habitats of extremophiles.

    PubMed

    Kristjánsson, J K; Hreggvidsson, G O

    1995-01-01

    This review describes the main natural extreme environments, characterized by high temperature, high and low pH and high salinity, that can be colonized by microorganisms. The environments covered are: freshwater alkaline hot springs; acidic solfatara fields; anaerobic geothermal mud and soils; acidic sulphur and pyrite areas; carbonate springs and alkaline soil; and soda and highly saline lakes. The community structure, in terms of available energy sources and representative autotrophic and heterotrophic microorganisms, is discussed for each type of habitat.

  2. Ghosts of habitats past: Contribution of landscape change to current habitats used by shrubland birds

    USGS Publications Warehouse

    Knick, Steven T.; Rotenberry, J.T.

    2000-01-01

    Models of habitat associations for species often are developed with an implicit assumption that habitats are static, even though recent disturbance may have altered the landscape. We tested our hypothesis that trajectory and magnitude of habitat change influenced observed distribution and abundance of passerine birds breeding in shrubsteppe habitats of southwestern Idaho. Birds in this region live in dynamic landscapes undergoing predominantly large-scale, radical, and unidirectional habitat change because wildfires are converting shrublands into expanses of exotic annual grasslands. We used data from field surveys and satellite image analyses in a series of redundancy analyses to partition variances and to determine the relative contribution of habitat change and current landscapes. Although current habitats explained a greater proportion of total variation, changes in habitat and measures of habitat richness and texture also contributed to variation in abundance of Horned Larks (Eremophila alpestris), Brewera??s Sparrows (Spizella breweri), and Sage Sparrows (Amphispiza belli). Abundance of birds was insensitive to scale for nonspatial habitat variables. In contrast, spatial measures of habitat richness and texture in the landscape were significant only at large spatial scales. Abundance of Horned Larks, Western Meadowlarks (Sturnella neglecta), and Brewera??s Sparrows, but not Sage Thrashers (Oreoscoptes montanus) or Sage Sparrows, was positively correlated with changes toward stable habitats. Because dominant habitat changes were toward less stable conditions, regional declines of those birds in shrubsteppe habitats reflect current landscapes as well as the history, magnitude, and trajectory of habitat change.

  3. REVIEW: Can habitat selection predict abundance?

    PubMed

    Boyce, Mark S; Johnson, Chris J; Merrill, Evelyn H; Nielsen, Scott E; Solberg, Erling J; van Moorter, Bram

    2016-01-01

    Habitats have substantial influence on the distribution and abundance of animals. Animals' selective movement yields their habitat use. Animals generally are more abundant in habitats that are selected most strongly. Models of habitat selection can be used to distribute animals on the landscape or their distribution can be modelled based on data of habitat use, occupancy, intensity of use or counts of animals. When the population is at carrying capacity or in an ideal-free distribution, habitat selection and related metrics of habitat use can be used to estimate abundance. If the population is not at equilibrium, models have the flexibility to incorporate density into models of habitat selection; but abundance might be influenced by factors influencing fitness that are not directly related to habitat thereby compromising the use of habitat-based models for predicting population size. Scale and domain of the sampling frame, both in time and space, are crucial considerations limiting application of these models. Ultimately, identifying reliable models for predicting abundance from habitat data requires an understanding of the mechanisms underlying population regulation and limitation. © 2015 The Authors. Journal of Animal Ecology published by John Wiley & Sons Ltd on behalf of British Ecological Society.

  4. Dispersing brush mice prefer habitat like home

    PubMed Central

    Mabry, Karen E; Stamps, Judy A

    2007-01-01

    During natal dispersal, young animals leave their natal area and search for a new area to live. In species in which individuals inhabit different types of habitat, experience with a natal habitat may increase the probability that a disperser will select the same type of habitat post-dispersal (natal habitat preference induction or NHPI). Despite considerable interest in the ecological and the evolutionary implications of NHPI, we lack empirical evidence that it occurs in nature. Here we show that dispersing brush mice (Peromyscus boylii) are more likely to search and settle within their natal habitat type than expected based on habitat availability. These results document the occurrence of NHPI in nature and highlight the relevance of experience-generated habitat preferences for ecological and evolutionary processes. PMID:18077253

  5. Habitat Suitability Index Models: Smallmouth bass

    USGS Publications Warehouse

    Edwards, Elizabeth A.; Gebhart, Glen; Maughan, O. Eugene

    1983-01-01

    A review and synthesis of existing information were used to develop riverine and lacustrine habitat models for Smallmouth bass (Micropterus dolomieui), a freshwater species. The models are scaled to produce an index of habitat suitability between 0 (unsuitable habitat) and 1 (optimally suitable habitat) for freshwater areas of the continental United States. Habitat suitability indexes (HSI's) are designed for use with the habitat evaluation procedures developed by the U.S. Fish and Wildlife Service. The instream flow suitability curves are intended for use with the Instream Flow Incremental Methodology. Also included are discussions of Suitability Index (SI) curves as used by the Instream Flow Incremental Methodology (IFIM) and SI curves available for an IFIM analysis of Smallmouth bass habitat.

  6. Simulating mechanisms for dispersal, production and stranding of small forage fish in temporary wetland habitats

    USGS Publications Warehouse

    Yurek, Simeon; DeAngelis, Donald L.; Trexler, Joel C.; Jopp, Fred; Donalson, Douglas D.

    2013-01-01

    Movement strategies of small forage fish (<8 cm total length) between temporary and permanent wetland habitats affect their overall population growth and biomass concentrations, i.e., availability to predators. These fish are often the key energy link between primary producers and top predators, such as wading birds, which require high concentrations of stranded fish in accessible depths. Expansion and contraction of seasonal wetlands induce a sequential alternation between rapid biomass growth and concentration, creating the conditions for local stranding of small fish as they move in response to varying water levels. To better understand how landscape topography, hydrology, and fish behavior interact to create high densities of stranded fish, we first simulated population dynamics of small fish, within a dynamic food web, with different traits for movement strategy and growth rate, across an artificial, spatially explicit, heterogeneous, two-dimensional marsh slough landscape, using hydrologic variability as the driver for movement. Model output showed that fish with the highest tendency to invade newly flooded marsh areas built up the largest populations over long time periods with stable hydrologic patterns. A higher probability to become stranded had negative effects on long-term population size, and offset the contribution of that species to stranded biomass. The model was next applied to the topography of a 10 km × 10 km area of Everglades landscape. The details of the topography were highly important in channeling fish movements and creating spatiotemporal patterns of fish movement and stranding. This output provides data that can be compared in the future with observed locations of fish biomass concentrations, or such surrogates as phosphorus ‘hotspots’ in the marsh.

  7. Lunar base habitat designs: Characterizing the environment, and selecting habitat designs for future trade-offs

    NASA Technical Reports Server (NTRS)

    Ganapathi, Gani B.; Ferrall, Joseph; Seshan, P. K.

    1993-01-01

    A survey of distinct conceptual lunar habitat designs covering the pre- and post-Apollo era is presented. The impact of the significant lunar environmental challenges such as temperature, atmosphere, radiation, soil properties, meteorites, and seismic activity on the habitat design parameters are outlined. Over twenty habitat designs were identified and classified according to mission type, crew size; total duration of stay, modularity, environmental protection measures, and emplacement. Simple selection criteria of (1) post-Apollo design, (2) uniqueness of the habitat design, (3) level of thoroughness in design layout, (4) habitat dimensions are provided, and (5) materials of construction for the habitat shell are specified, are used to select five habitats for future trade studies. Habitat emplacement scenarios are created to examine the possible impact of emplacement of the habitat in different locations, such as lunar poles vs. equatorial, above ground vs. below ground, etc.

  8. Data Collection and Simulation of Ecological Habitat and Recreational Habitat in the Shenandoah River, Virginia

    USGS Publications Warehouse

    Krstolic, Jennifer L.

    2015-01-01

    Time-series analyses were used to investigate changes in habitat availability with increased water withdrawals of 10, 20, and almost 50 percent (48.6 percent) up to the 2040 amounts projected by local water supply plans. Adult and sub-adult smallmouth bass frequently had habitat availability outside the normal range for habitat conditions during drought years, yet 10- or 20-percent increases in withdrawals did not contribute to a large reduction in habitat. When withdrawals were increased by 50 percent, there was an additional decrease in habitat. During 2002 drought scenarios, reduced habitat availability for sub-adult redbreast sunfish or river chub was only slightly evident with 50-percent increased withdrawal scenarios. Recreational habitat represented by canoeing decreased lower than normal during the 2002 drought. For a recent normal year, like 2012, increased water-withdrawal scenarios did not affect habitat availability for fish such as adult and sub-adult smallmouth bass, sub-adult redbreast sunfish, or river chub. Canoeing habitat availability was within the normal range most of 2012, and increased water-withdrawal scenarios showed almost no affect. For both ecological fish habitat and recreational canoeing habitat, the antecedent conditions (habitat within normal range of habitat or below normal) appear to govern whether additional water withdrawals will affect habitat availability. As human populations and water demands increase, many of the ecological or recreational stresses may be lessened by managing the timing of water withdrawals from the system.

  9. Advanced Plant Habitat Test Harvest

    NASA Image and Video Library

    2017-08-24

    Arabidopsis thaliana plants are seen inside the growth chamber of the Advanced Plant Habitat (APH) Flight Unit No. 1 prior to harvest of half the plants. The harvest is part of an ongoing verification test of the APH unit, which is located inside the International Space Station Environmental Simulator in NASA Kennedy Space Center's Space Station Processing Facility. The APH undergoing testing at Kennedy is identical to one on the station and uses red, green and broad-spectrum white LED lights to grow plants in an environmentally controlled chamber. The seeds grown during the verification test will be grown on the station to help scientists understand how these plants adapt to spaceflight.

  10. Habitats of North American sea ducks.

    USGS Publications Warehouse

    Derksen, Dirk V.; Petersen, Margaret R.; Savard, Jean-Pierre L.

    2015-01-01

    Breeding, molting, fall and spring staging, and wintering habitats of the sea duck tribe Mergini are described based on geographic locations and distribution in North America, geomorphology, vegetation and soil types, and fresh water and marine characteristics. The dynamics of habitats are discussed in light of natural and anthropogenic events that shape areas important to sea ducks. Strategies for sea duck habitat management are outlined and recommendations for international collaboration to preserve key terrestrial and aquatic habitats are advanced. We follow the definition of habitat advanced by Odum (1971), which is the place or space where an organism lives. Weller (1999) emphasized that habitats for waterbirds required presence of sufficient resources (i.e., food, water, cover, space) for maintenance during a portion of their annual cycle. Habitats exploited by North American sea ducks are diverse, widespread across the continent and adjacent marine waters and until recently, most were only superficially known. Even following a 15-year-long effort through the Sea Duck Joint Venture and U.S. and Canadian Endangered/Threatened Species programs to fund research focused on sea duck habitats there are still important gaps in our understanding of key elements required by some species during various life stages. Importantly, many significant habitats, especially staging and wintering sites, have been and continue to be destroyed or altered, largely as a result of anthropogenic effects. Our goal here is to develop a comprehensive summary of marine, freshwater, and terrestrial habitats and their characteristics by considering sea duck species with similar needs as groups (e.g., eiders) within the tribe Mergini. Additionally, this chapter will examine threats and changes to sea duck habitats from human-caused and natural events. Finally, we will evaluate conservation and management programs underway or available for maintenance and enhancement of habitats critical for

  11. 50 CFR 17.94 - Critical habitats.

    Code of Federal Regulations, 2010 CFR

    2010-10-01

    ... 50 Wildlife and Fisheries 2 2010-10-01 2010-10-01 false Critical habitats. 17.94 Section 17.94... habitats. (a) The areas listed in § 17.95 (fish and wildlife) and § 17.96 (plants) and referred to in the lists at §§ 17.11 and 17.12 have been determined by the Director to be Critical Habitat. All Federal...

  12. 50 CFR 17.94 - Critical habitats.

    Code of Federal Regulations, 2013 CFR

    2013-10-01

    ... 50 Wildlife and Fisheries 2 2013-10-01 2013-10-01 false Critical habitats. 17.94 Section 17.94... habitats. (a) The areas listed in § 17.95 (fish and wildlife) and § 17.96 (plants) and referred to in the lists at §§ 17.11 and 17.12 have been determined by the Director to be Critical Habitat. All Federal...

  13. 50 CFR 17.94 - Critical habitats.

    Code of Federal Regulations, 2011 CFR

    2011-10-01

    ... 50 Wildlife and Fisheries 2 2011-10-01 2011-10-01 false Critical habitats. 17.94 Section 17.94... habitats. (a) The areas listed in § 17.95 (fish and wildlife) and § 17.96 (plants) and referred to in the lists at §§ 17.11 and 17.12 have been determined by the Director to be Critical Habitat. All Federal...

  14. 50 CFR 17.94 - Critical habitats.

    Code of Federal Regulations, 2012 CFR

    2012-10-01

    ... 50 Wildlife and Fisheries 2 2012-10-01 2012-10-01 false Critical habitats. 17.94 Section 17.94... habitats. (a) The areas listed in § 17.95 (fish and wildlife) and § 17.96 (plants) and referred to in the lists at §§ 17.11 and 17.12 have been determined by the Director to be Critical Habitat. All Federal...

  15. 50 CFR 17.94 - Critical habitats.

    Code of Federal Regulations, 2014 CFR

    2014-10-01

    ... 50 Wildlife and Fisheries 2 2014-10-01 2014-10-01 false Critical habitats. 17.94 Section 17.94... habitats. (a) The areas listed in § 17.95 (fish and wildlife) and § 17.96 (plants) and referred to in the lists at §§ 17.11 and 17.12 have been determined by the Director to be Critical Habitat. All Federal...

  16. Characterization of Anopheles pseudopunctipennis larval habitats.

    PubMed

    Manguin, S; Roberts, D R; Peyton, E L; Rejmankova, E; Pecor, J

    1996-12-01

    A survey of Anopheles pseudopunctipennis larval habitats was performed throughout most of its known geographic range. Eleven key environment variables characterized most larval habitats of this important vector of malaria in the Americas. Larval habitats occurred mainly in valley and foothill areas which were often situated in arid regions. Immatures were found primarily during the dry season in sun-exposed freshwater stream pools with clear, shallow, stagnant water containing abundant filamentous green algae and/or aquatic vegetation.

  17. Animal habitats for space experiments.

    PubMed

    Fukui, Keiji; Shimazu, Toru

    2004-11-01

    There has been little opportunity for flight experiments using small animals, due to delay of construction of the International Space Station. Therefore, proposals using small animals have been unfortunately excepted from International Space Life Sciences Experiment application opportunity since 2001. Moreover, NASA has changed their development plan of animal habitats for space experiments according to changes of the U.S. space policy and the outlook is not so bright. However, international researchers have been strongly requesting the opportunity for space experiments using small animals. It will be also important for Japanese researchers to make a request for the opportunity. At the same time, researchers have to make an advance in ground based studies toward space experiments and to respond future application opportunities immediately. In this symposium, we explain the AEM (Animal Enclosure Module), the RAHF (Research Animal Holding Facility), and the AAH (Advanced Animal Habitat). It will be helpful for investigators to have wide knowledge of what space experiment is technically possible. In addition, the sample share program will be introduced into our communities. The program will provide many researchers with the organs and tissues from space-flown animals. We will explain the technical aspect of sample share program.

  18. The Habitat Demonstration Unit Project

    NASA Technical Reports Server (NTRS)

    Kennedy, Kriss J.; Gill, Tracy; Tri, Terry; Howe, Scott

    2009-01-01

    This paper will describe an overview of the NASA-led multi-center Habitat Demonstration Unit (HDU) Project. The HDU project is a technology-pull project that integrates technologies and innovations from numerous NASA centers. This project will be used to investigate and validate surface architectures, operations concepts, and requirements definition. The HDU project will be part of the 2010 Desert Research and Technologies Simulations (DRATS). The purpose of this project is to develop, integrate, test, and evaluate a HDU in the context of the mission architectures and surface operation concepts. This HDU is based on the Constellation Architecture Scenario 12.1 concept of a vertically oriented habitat module. A multi-center approach with be utilized to build, integrate, and test the HDU project through a shared collaborative effort of multiple NASA centers. This project is part of the strategic plan from the ESMD Directorate Integration Office (DIO) and the Lunar Surface Systems Project Office (LSSPO) to test surface elements in a surface analog environment which includes two Lunar Electric Rovers and the HDU during the 2010 analog field test. This paper will describe the overall objectives, its various configurations, strategic plan, and technology integration as it pertains to the 2010 and 2011 field analog tests.

  19. Elevation Derivatives for Mojave Desert Tortoise Habitat

    USGS Publications Warehouse

    Wallace, Cynthia S.A.; Gass, Leila

    2008-01-01

    This report describes the methods used to derive various elevation-derivative grids that were inputted to the Mojave Desert Tortoise Habitat model (L. Gass and others, unpub. data). These grids, which capture information on surface roughness and topographic characteristics, are a subset of the environmental datasets evaluated for the tortoise habitat model. This habitat model is of major importance to the U.S. Fish and Wildlife Service, which is charged with management of this threatened population, including relocating displaced tortoises to areas identified as suitable habitat.

  20. A Case Study of Habitat for Humanity

    DTIC Science & Technology

    1994-01-01

    of reference 3). 4.2.1 Precedence Method using Primavera Proiect Planner (p3. The p3 software system was initially chosen because it is so...I ! I, B-8I I APPENDIX C INITIAL TABULAR SCHEDULE PRINTOUT ALACHUA HABITAT FOR HU1ANITY PRIMAVERA PROJECT PLANNER HABITAT FOR NANITY GENEIIC REPORT...HABITAT FOR HUMANITY PRIMAVERA PROJECT PLANNER HABITAT FOR HUMANITY GENERIC SCNED REPORT DATE 15JUL94 RUN NO. 21 START DATE 30OCT93 FIN DATE 27JAN94 11

  1. Fuzzy modelling of Atlantic salmon physical habitat

    NASA Astrophysics Data System (ADS)

    St-Hilaire, André; Mocq, Julien; Cunjak, Richard

    2015-04-01

    Fish habitat models typically attempt to quantify the amount of available river habitat for a given fish species for various flow and hydraulic conditions. To achieve this, information on the preferred range of values of key physical habitat variables (e.g. water level, velocity, substrate diameter) for the targeted fishs pecies need to be modelled. In this context, we developed several habitat suitability indices sets for three Atlantic salmon life stages (young-of-the-year (YOY), parr, spawning adults) with the help of fuzzy logic modeling. Using the knowledge of twenty-seven experts, from both sides of the Atlantic Ocean, we defined fuzzy sets of four variables (depth, substrate size, velocity and Habitat Suitability Index, or HSI) and associated fuzzy rules. When applied to the Romaine River (Canada), median curves of standardized Weighted Usable Area (WUA) were calculated and a confidence interval was obtained by bootstrap resampling. Despite the large range of WUA covered by the expert WUA curves, confidence intervals were relatively narrow: an average width of 0.095 (on a scale of 0 to 1) for spawning habitat, 0.155 for parr rearing habitat and 0.160 for YOY rearing habitat. When considering an environmental flow value corresponding to 90% of the maximum reached by WUA curve, results seem acceptable for the Romaine River. Generally, this proposed fuzzy logic method seems suitable to model habitat availability for the three life stages, while also providing an estimate of uncertainty in salmon preferences.

  2. Habitat patterns in a small mammal community

    SciTech Connect

    Kitchings, J.T.; Levy, D.J.

    1981-11-01

    Microhabitat relationships between four sympatric small mammal species (Peromyscus leucopus, Ochrotomys nuttalli, Blarina brevicauda, and Tamias striatus) were examined to determine if their discriminant analysis of small mammal habitat represented a unique habitat utilization pattern for a specific small mammal community. The authors concluded that habitat is only one of many dimensions to be considered when studying the interactions of sympatric species. Reproductive strategy, activity patterns, and other factors make up the n-dimensional hyperspace of an animal's niche. Thus differences in habitat usage alone cannot be used to determine niche overlap and competition between species. (JMT)

  3. Effects of habitat management treatments on plant community composition and biomass in a Montane wetland

    USGS Publications Warehouse

    Austin, J.E.; Keough, J.R.; Pyle, W.H.

    2007-01-01

    Grazing and burning are commonly applied practices that can impact the diversity and biomass of wetland plant communities. We evaluated the vegetative response of wetlands and adjacent upland grasslands to four treatment regimes (continuous idle, fall prescribed burning followed by idle, annual fall cattle grazing, and rotation of summer grazing and idle) commonly used by the U.S. Fish and Wildlife Service. Our study area was Grays Lake, a large, montane wetland in southeastern Idaho that is bordered by extensive wet meadows. We identified seven plant cover types, representing the transition from dry meadow to deep wetland habitats: mixed deep marsh, spikerush slough, Baltic rush (Juncus balticus), moist meadow, alkali, mesic meadow, and dry meadow. We compared changes in community composition and total aboveground biomass of each plant cover type between 1998, when all units had been idled for three years, and 1999 (1 yr post-treatment) and 2000 (2 yr post-treatment). Analysis using non-metric multidimensional scaling indicated that compositional changes varied among cover types, treatments, and years following treatment. Treatment-related changes in community composition were greatest in mixed deep marsh, Baltic rush, and mesic meadow. In mixed deep marsh and Baltic rush, grazing and associated trampling contributed to changes in the plant community toward more open water and aquatic species and lower dominance of Baltic rush; grazing and trampling also seemed to contribute to increased cover in mesic meadow. Changing hydrological conditions, from multiple years of high water to increasing drought, was an important factor influencing community composition and may have interacted with management treatments. Biomass differed among treatments and between years within cover types. In the wettest cover types, fall burning and grazing rotation treatments had greater negative impact on biomass than the idle treatment, but in drier cover types, summer grazing stimulated

  4. Habitat Evaluation Procedures (HEP) Report; Steigerwald Lake National Wildlife Refuge, Technical Report 2000-2001.

    SciTech Connect

    Allard, Donna

    2001-09-01

    Steigenvald Lake National Wildlife Refuge (NWR, refuge) was established as a result of the U. S. Army Corps of Engineers (COE) transferring ownership of the Stevenson tract located in the historic Steigerwald Lake site to the U.S. Fish and Wildlife Service (FWS, Service) for the mitigation of the fish and wildlife losses associated with the construction of a second powerhouse at the Bonneville Dam on the Columbia River and relocation of the town of North Bonneville (Public Law 98-396). The construction project was completed in 1983 and resulted in the loss of approximately 577 acres of habitat on the Washington shore of the Columbia River (USFWS, 1982). The COE determined that acquisition and development of the Steigenvald Lake area, along with other on-site project management actions, would meet their legal obligation to mitigate for these impacts (USCOE, 1985). Mitigation requirements included restoration and enhancement of this property to increase overall habitat diversity and productivity. From 1994 to 1999, 317 acres of additional lands, consisting of four tracts of contiguous land, were added to the original refuge with Bonneville Power Administration (BPA) funds provided through the Washington Wildlife Mitigation Agreement. These tracts comprised Straub (191 acres), James (90 acres), Burlington Northern (27 acres), and Bliss (9 acres). Refer to Figure 1. Under this Agreement, BPA budgeted $2,730,000 to the Service for 'the protection, mitigation, and enhancement of wildlife and wildlife habitat that was adversely affected by the construction of Federal hydroelectric dams on the Columbia River or its tributaries' in the state of Washington (BPA, 1993). Lands acquired for mitigation resulting from BPA actions are evaluated using the habitat evaluation procedures (HEP) methodology, which quantifies how many Habitat Units (HUs) are to be credited to BPA. HUs or credits gained lessen BPA's debt, which was formally tabulated in the Federal Columbia River Power

  5. Habitat destruction, fragmentation, and disturbance promote invasion by habitat generalists in a multispecies metapopulation.

    PubMed

    Marvier, Michelle; Kareiva, Peter; Neubert, Michael G

    2004-08-01

    Species invasions are extremely common and are vastly outpacing the ability of resource agencies to address each invasion, one species at a time. Management actions that target the whole landscape or ecosystem may provide more cost-effective protection against the establishment of invasive species than a species-by-species approach. To explore what ecosystem-level actions might effectively reduce invasions, we developed a multispecies, multihabitat metapopulation model. We assume that species that successfully establish themselves outside their native range tend to be habitat generalists and that a tradeoff exists between competitive ability and habitat breadth, such that habitat specialists are competitively superior to habitat generalists. In this model, habitat destruction, fragmentation, and short-term disturbances all favor invasion by habitat generalists, despite the inferior competitive abilities of generalist species. Our model results illustrate that providing relatively undisturbed habitat and preventing further habitat degradation and fragmentation can provide a highly cost-effective defense against invasive species.

  6. 75 FR 34975 - Notice of Estuary Habitat Restoration Council's Intent to Revise its Estuary Habitat Restoration...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-06-21

    ... National Oceanic and Atmospheric Administration RIN 0648-XX00 Notice of Estuary Habitat Restoration Council's Intent to Revise its Estuary Habitat Restoration Strategy; Request for Public Comment AGENCY.... ACTION: Notice; request for comments. SUMMARY: NOAA, on behalf of the interagency Estuary Habitat...

  7. Effect of a Recently Completed Habitat Rehabilitation and Enhancement Project on Fish Abundance in La Grange Pool of the Illinois River Using Long Term Resource Monitoring Program Data

    DTIC Science & Technology

    2008-03-01

    Big Lake; 2=Duck Island; 3=Clear Lake; 4=Meyers Ditch; 5=Quiver Lake; 6= Matanzas Lake; 7=Crane Lake; 8=Chain Lake; 9=Bach Slough; 10=Snicarte Slough...01/09. 68 pp. Lubinski, K. R., R. Burkhardt, J. Sauer, D. Soballe, and Y. Yin. 2001. Initial analyses of change detection capabilities and data

  8. Habitat selection by Mexican Spotted Owls in Northern Arizona

    Treesearch

    Joseph L. Ganey; Russell P. Balda

    1994-01-01

    We compared use of seven habitat types to availability of those types within the home ranges of eight radio-tagged Mexican Spotted Owls (Strix occidentalis lucida). When all habitat types were considered simultaneously, habitat use differed from habitat availability for each owl. Patterns of habitat use varied among individuals and with respect to...

  9. MEGAEPIFAUNA-HABITAT RELATIONSHIPS IN YAQUINA BAY, OR

    EPA Science Inventory

    Habitat-based ecological risk assessments rely, in part, on estimates of the ecological value of the habitats at risk. As part of a larger programmatic effort to estimate estuarine habitat values, we determined megaepifauna-habitat relationships for four major intertidal habitat...

  10. BENTHIC MACROFAUNA-HABITAT RELATIONSHIPS IN TWO PACIFIC NORTHWEST ESTUARIES

    EPA Science Inventory

    Habitat-based ecological risk assessments rely, in part, on estimates of the ecological value of the habitats at risk. As part of a larger programmatic effort to estimate estuarine habitat values, we determined benthic macrofauna-habitat relationships for 8 intertidal habitats i...

  11. MEGAEPIFAUNA-HABITAT RELATIONSHIPS IN YAQUINA BAY, OR

    EPA Science Inventory

    Habitat-based ecological risk assessments rely, in part, on estimates of the ecological value of the habitats at risk. As part of a larger programmatic effort to estimate estuarine habitat values, we determined megaepifauna-habitat relationships for four major intertidal habitat...

  12. BENTHIC MACROFAUNA-HABITAT RELATIONSHIPS IN TWO PACIFIC NORTHWEST ESTUARIES

    EPA Science Inventory

    Habitat-based ecological risk assessments rely, in part, on estimates of the ecological value of the habitats at risk. As part of a larger programmatic effort to estimate estuarine habitat values, we determined benthic macrofauna-habitat relationships for 8 intertidal habitats i...

  13. Advanced Plant Habitat Test Harvest

    NASA Image and Video Library

    2017-08-24

    John "JC" Carver, a payload integration engineer with NASA Kennedy Space Center's Test and Operations Support Contract, uses a FluorPen to measure the chlorophyll fluorescence of Arabidopsis thaliana plants inside the growth chamber of the Advanced Plant Habitat (APH) Flight Unit No. 1. Half the plants were then harvested. The harvest is part of an ongoing verification test of the APH unit, which is located inside the International Space Station Environmental Simulator in Kennedy's Space Station Processing Facility. The APH undergoing testing at Kennedy is identical to one on the station and uses red, green and broad-spectrum white LED lights to grow plants in an environmentally controlled chamber. The seeds grown during the verification test will be grown on the station to help scientists understand how these plants adapt to spaceflight.

  14. Advanced Plant Habitat Test Harvest

    NASA Image and Video Library

    2017-08-24

    John "JC" Carver, a payload integration engineer with NASA Kennedy Space Center's Test and Operations Support Contract, harvests half the Arabidopsis thaliana plants inside the growth chamber of the Advanced Plant Habitat (APH) Flight Unit No. 1. The harvest is part of an ongoing verification test of the APH unit, which is located inside the International Space Station Environmental Simulator in Kennedy's Space Station Processing Facility. The APH undergoing testing at Kennedy is identical to one on the station and uses red, green and broad-spectrum white LED lights to grow plants in an environmentally controlled chamber. The seeds grown during the verification test will be grown on the station to help scientists understand how these plants adapt to spaceflight.

  15. Advanced Plant Habitat Test Harvest

    NASA Image and Video Library

    2017-08-24

    John "JC" Carver, a payload integration engineer with NASA Kennedy Space Center's Test and Operations Support Contract, opens the door to the growth chamber of the Advanced Plant Habitat (APH) Flight Unit No. 1 for a test harvest of half of the Arabidopsis thaliana plants growing within. The harvest is part of an ongoing verification test of the APH unit, which is located inside the International Space Station Environmental Simulator in Kennedy's Space Station Processing Facility. The APH undergoing testing at Kennedy is identical to one on the station and uses red, green and broad-spectrum white LED lights to grow plants in an environmentally controlled chamber. The seeds grown during the verification test will be grown on the station to help scientists understand how these plants adapt to spaceflight.

  16. Advanced Plant Habitat Test Harvest

    NASA Image and Video Library

    2017-08-24

    John "JC" Carver, a payload integration engineer with NASA Kennedy Space Center's Test and Operations Support Contract, places Arabidopsis thaliana plants harvested from the Advanced Plant Habitat (APH) Flight Unit No. 1 into a Mini ColdBag that quickly freezes the plants. The harvest is part of an ongoing verification test of the APH unit, which is located inside the International Space Station Environmental Simulator in Kennedy's Space Station Processing Facility. The APH undergoing testing at Kennedy is identical to one on the station and uses red, green and broad-spectrum white LED lights to grow plants in an environmentally controlled chamber. The seeds grown during the verification test will be grown on the station to help scientists understand how these plants adapt to spaceflight.

  17. Advanced Plant Habitat Test Harvest

    NASA Image and Video Library

    2017-08-24

    John "JC" Carver, a payload integration engineer with NASA Kennedy Space Center's Test and Operations Support Contract, places Arabidopsis thaliana plants harvested from the Advanced Plant Habitat (APH) Flight Unit No. 1 into an Ultra-low Freezer chilled to -150 degrees Celsius. The harvest is part of an ongoing verification test of the APH unit, which is located inside the International Space Station Environmental Simulator in Kennedy's Space Station Processing Facility. The APH undergoing testing at Kennedy is identical to one on the station and uses red, green and broad-spectrum white LED lights to grow plants in an environmentally controlled chamber. The seeds grown during the verification test will be grown on the station to help scientists understand how these plants adapt to spaceflight.

  18. An Initial Mars Habitat (IMH)

    NASA Astrophysics Data System (ADS)

    Gutierrez, D. J.

    1993-02-01

    As long duration, manned missions to Mars are studied for feasibility, the requirements to maintain a crew for two years in hostile environments while allowing productive and necessary work to occur, quickly becomes a driving force. Based on a mission scenario developed in the Explorations Program Office at the Johnson Space, the Initial Mars Habitat (IMH) explores one solution to providing a six person crew with the necessary hardware, logistics and environment to support a 500 day Martian surface stay. Many key issues drove the development of this initial concept; crew safety, logistics resupply, crew productivity and several critical mission element assumptions such as the limitations of a surface lander. Consideration of expansion beyond the first mission to an enhanced capability base was also integrated into the development of the IMH.

  19. OA-7 Advanced Plant Habitat

    NASA Image and Video Library

    2017-02-15

    Inside a laboratory at the Space Station Processing Facility at NASA's Kennedy Space Center in Florida, scientists prepare Apogee wheat seeds for the science carrier, or base, of the Advanced Plant Habitat (APH). A growing substrate called arcillite is packed down in the base and coverings are secured to seal the base. The Apogee wheat seeds are then inserted into the carrier. Developed by NASA and ORBITEC of Madison, Wisconsin, the APH is the largest plant chamber built for the agency. It is a fully automated plant growth facility that will be used to conduct bioscience research on the International Space Station. The APH will be delivered to the space station aboard future Commercial Resupply Services missions.

  20. Subseafloor basalts as fungal habitats

    NASA Astrophysics Data System (ADS)

    Ivarsson, M.

    2012-02-01

    The oceanic crust is believed to host the largest potential habitat for microbial life on Earth, yet, next to nothing is known about this deep, concealed biosphere. Here fossilised fungal colonies in subseafloor basalts are reported from three different seamounts in the Pacific Ocean. The fungal colonies consist of various characteristic structures interpreted as fungal hyphae, fruit bodies and spores. The fungal hyphae are well preserved with morphological characteristics such as hyphal walls, septa, thallic conidiogenesis, and hyphal tips with hyphal vesicles within. The fruit bodies consist of large (~50-200 μm in diameter) body-like structures with a defined outer membrane and an interior filled with calcite. The fruit bodies have at some stage been emptied of their contents of spores and filled by carbonate forming fluids. A few fruit bodies not filled by calcite and with spores still within support this interpretation. Spore-like structures (ranging from a few μm:s to ∼20 μm in diameter) are also observed outside of the fruit bodies and in some cases concentrated to openings in the membrane of the fruit bodies. The hyphae, fruit bodies and spores are all closely associated with a crust lining the vein walls that probably represent a mineralized biofilm. The results support a fungal presence in deep subseafloor basalts and indicate that such habitats were vital between ∼81 and 48 Ma, and probably still is. It is suggested that near future ocean drilling programs prioritize sampling of live species to better understand this concealed biosphere.

  1. Subseafloor basalts as fungal habitats

    NASA Astrophysics Data System (ADS)

    Ivarsson, M.

    2012-09-01

    The oceanic crust is believed to host the largest potential habitat for microbial life on Earth, yet, still we lack substantial information about the abundance, diversity, and consequence of its biosphere. The last two decades have involved major research accomplishments within this field and a change in view of the ocean crust and its potential to harbour life. Here fossilised fungal colonies in subseafloor basalts are reported from three different seamounts in the Pacific Ocean. The fungal colonies consist of various characteristic structures interpreted as fungal hyphae, fruit bodies and spores. The fungal hyphae are well preserved with morphological characteristics such as hyphal walls, septa, thallic conidiogenesis, and hyphal tips with hyphal vesicles within. The fruit bodies consist of large (∼50-200 µm in diameter) body-like structures with a defined outer membrane and an interior filled with calcite. The fruit bodies have at some stage been emptied of their contents of spores and filled by carbonate-forming fluids. A few fruit bodies not filled by calcite and with spores still within support this interpretation. Spore-like structures (ranging from a few µm to ∼20 µm in diameter) are also observed outside of the fruit bodies and in some cases concentrated to openings in the membrane of the fruit bodies. The hyphae, fruit bodies and spores are all closely associated with a crust lining the vein walls that probably represent a mineralized biofilm. The results support a fungal presence in deep subseafloor basalts and indicate that such habitats were vital between ∼81 and 48 Ma.

  2. Habitat use by fishes in coral reefs, seagrass beds and mangrove habitats in the Philippines.

    PubMed

    Honda, Kentaro; Nakamura, Yohei; Nakaoka, Masahiro; Uy, Wilfredo H; Fortes, Miguel D

    2013-01-01

    Understanding the interconnectivity of organisms among different habitats is a key requirement for generating effective management plans in coastal ecosystems, particularly when determining component habitat structures in marine protected areas. To elucidate the patterns of habitat use by fishes among coral, seagrass, and mangrove habitats, and between natural and transplanted mangroves, visual censuses were conducted semiannually at two sites in the Philippines during September and March 2010-2012. In total, 265 species and 15,930 individuals were recorded. Species richness and abundance of fishes were significantly higher in coral reefs (234 species, 12,306 individuals) than in seagrass (38 species, 1,198 individuals) and mangrove (47 species, 2,426 individuals) habitats. Similarity tests revealed a highly significant difference among the three habitats. Fishes exhibited two different strategies for habitat use, inhabiting either a single (85.6% of recorded species) or several habitats (14.4%). Some fish that utilized multiple habitats, such as Lutjanus monostigma and Parupeneus barberinus, showed possible ontogenetic habitat shifts from mangroves and/or seagrass habitats to coral reefs. Moreover, over 20% of commercial fish species used multiple habitats, highlighting the importance of including different habitat types within marine protected areas to achieve efficient and effective resource management. Neither species richness nor abundance of fishes significantly differed between natural and transplanted mangroves. In addition, 14 fish species were recorded in a 20-year-old transplanted mangrove area, and over 90% of these species used multiple habitats, further demonstrating the key role of transplanted mangroves as a reef fish habitat in this region.

  3. Habitat Use by Fishes in Coral Reefs, Seagrass Beds and Mangrove Habitats in the Philippines

    PubMed Central

    Honda, Kentaro; Nakamura, Yohei; Nakaoka, Masahiro; Uy, Wilfredo H.; Fortes, Miguel D.

    2013-01-01

    Understanding the interconnectivity of organisms among different habitats is a key requirement for generating effective management plans in coastal ecosystems, particularly when determining component habitat structures in marine protected areas. To elucidate the patterns of habitat use by fishes among coral, seagrass, and mangrove habitats, and between natural and transplanted mangroves, visual censuses were conducted semiannually at two sites in the Philippines during September and March 2010–2012. In total, 265 species and 15,930 individuals were recorded. Species richness and abundance of fishes were significantly higher in coral reefs (234 species, 12,306 individuals) than in seagrass (38 species, 1,198 individuals) and mangrove (47 species, 2,426 individuals) habitats. Similarity tests revealed a highly significant difference among the three habitats. Fishes exhibited two different strategies for habitat use, inhabiting either a single (85.6% of recorded species) or several habitats (14.4%). Some fish that utilized multiple habitats, such as Lutjanus monostigma and Parupeneus barberinus, showed possible ontogenetic habitat shifts from mangroves and/or seagrass habitats to coral reefs. Moreover, over 20% of commercial fish species used multiple habitats, highlighting the importance of including different habitat types within marine protected areas to achieve efficient and effective resource management. Neither species richness nor abundance of fishes significantly differed between natural and transplanted mangroves. In addition, 14 fish species were recorded in a 20-year-old transplanted mangrove area, and over 90% of these species used multiple habitats, further demonstrating the key role of transplanted mangroves as a reef fish habitat in this region. PMID:23976940

  4. Relating Habitat and Climatic Niches in Birds

    PubMed Central

    Barnagaud, Jean-Yves; Devictor, Vincent; Jiguet, Frédéric; Barbet-Massin, Morgane; Le Viol, Isabelle; Archaux, Frédéric

    2012-01-01

    Predicting species' responses to the combined effects of habitat and climate changes has become a major challenge in ecology and conservation biology. However, the effects of climatic and habitat gradients on species distributions have generally been considered separately. Here, we explore the relationships between the habitat and thermal dimensions of the ecological niche in European common birds. Using data from the French Breeding Bird Survey, a large-scale bird monitoring program, we correlated the habitat and thermal positions and breadths of 74 bird species, controlling for life history traits and phylogeny. We found that cold climate species tend to have niche positions in closed habitats, as expected by the conjunction of the biogeographic history of birds' habitats, and their current continent-scale gradients. We also report a positive correlation between thermal and habitat niche breadths, a pattern consistent with macroecological predictions concerning the processes shaping species' distributions. Our results suggest that the relationships between the climatic and habitat components of the niche have to be taken into account to understand and predict changes in species' distributions. PMID:22427891

  5. Estuaries and Tidal Marshes. Habitat Pac.

    ERIC Educational Resources Information Center

    Fish and Wildlife Service (Dept. of Interior), Washington, DC.

    This educational packet consists of an overview, three lesson plans, student data sheets, and a poster. The overview examines estuaries and tidal or salt marshes by discussing the plants and animals in these habitats, marsh productivity, benefits and management of the habitats, historical aspects, and development and pollution. A glossary and list…

  6. Habitat selection and the perceptual trap.

    PubMed

    Patten, Michael A; Kelly, Jeffrey F

    2010-12-01

    The concept of "ecological traps" was introduced over three decades ago. An ecological trap occurs when, by various mechanisms, low-quality (yielding low fitness) habitat is more attractive than good habitat, thus coaxing individuals to settle there despite a resultant loss of fitness. Empirical work on such traps has increased dramatically in the past decade, but the converse-avoidance of high-quality habitat because it is less attractive, what we term a "perceptual trap" has remained largely unexplored. Even so, depending on conditions (growth rate, strength of habitat preference, and mortality rate), such perceptual traps can be more limiting than ecological traps to population persistence. An example from field experiments with the Lesser Prairie-Chicken (Tympanuchus pallidicinctus) lends empirical support to the concept, and several other potential examples suggest that these traps are perhaps more prevalent than has been appreciated. Because demographic Allee effects are expected to prevent a population from growing sufficiently in a habitat that is avoided, a perceptual trap may persist even though fitness is high. Unlike an ecological trap, which may be negated by increasing habitat quality, biologists will be hard pressed to negate a perceptual trap, which will require determining which cues an animal uses to select high-quality habitat and then devising a means of enhancing those cues so that an animal is lured into the habitat.

  7. Static Atmospheres in a Rotating Space Habitat.

    ERIC Educational Resources Information Center

    McKinley, John M.

    1980-01-01

    Discusses O'Neill's proposal for the colonization of space as it offers new problems in pure physics. Addresses specifically the distribution of the atmosphere in O'Neill's habitat and whether there will be enough air at the axis of rotation to allow human-powered flight, with particular reference to the habitat's "artificial gravity."…

  8. Habitat Impact on Ultraviolet Reflectance in Moths.

    PubMed

    Zapletalová, L; Zapletal, M; Konvička, M

    2016-10-01

    A comparison of 95 species of Central European moths, representing 11 families and inhabiting various habitats, was carried out in order to detect the potential impact of biotope on the ultraviolet (UV) light reflectance of their wings. Based on digitized photographs taken under UV light conditions, a phylogeny-controlled redundancy analysis relating UV reflectance to preferred habitat type (xerophilous, mesophilous, and hygrophilous) and habitat openness (open, semiopen, and closed) was carried out. Species preferring hygrophilous habitats displayed significantly higher UV wing reflectance than species inhabiting xerothermic and mesic habitats, and this pattern remained significant even after controlling for phyletic relationships. In contrast, UV wing reflectance displayed no pattern related to habitat openness. Given the higher UV reflectance of water and humid surfaces, we interpret these results, which are based on the first comprehensive sampling of UV reflectance in Central European moths, in terms of predator avoidance under habitat-specific light conditions. We conclude that the moisture content of the environment may markedly contribute to the variation of appearance of moth wings for better imitation habitat characteristics and therefore to increase protection. © The Authors 2016. Published by Oxford University Press on behalf of Entomological Society of America. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

  9. Habitat management considerations for prairie chickens

    USGS Publications Warehouse

    Kirsch, L.M.

    1974-01-01

    Lack of nesting and brood rearing habitat appears to be the universal limiting factor for prairie chickens (Tympanuchus cupido pinnatus) throughout their range. Grasslands are essential to prairie chickens, but vary widely in quality and thus in their ability to support prairie chickens. High-quality habitat is grassland providing residual vegetation averaging about 20 inches in height in spring and sufficiently dense to completely conceal a nesting prairie chicken. Annually grazed, annually hayed, or long-term (10 years or more) idled habitats are undesirable. The most successful method for maintaining high-quality nest-brood habitat is prescribed burning at 3- to 5-year intervals; such habitat may be established by seeding grass or grass-legume mixtures. Seeded habitat may be maintained by prescribed burning at 3- to 5-year intervals. Management units should contain at least 2 square miles of high-quality habitat within an area not to exceed 8 square miles. High-quality habitat blocks should be at least 160 acres with a minimum width of one-half mile. Based on available evidence, funding to provide winter food or cover is not recommended.

  10. Big game habitat use in southeastern Montana

    Treesearch

    James G. MacCracken; Daniel W. Uresk

    1984-01-01

    The loss of suitable, high quality habitat is a major problem facing big game managers in the western United States. Agricultural, water, road and highway, housing, and recreational development have contributed to loss of natural big game habitat (Wallmo et al. 1976, Reed 1981). In the western United States, surface mining of minerals has great potential to adversely...

  11. Habitats NatureScope[R] Kit.

    ERIC Educational Resources Information Center

    Emerson, Eva

    This kit introduces the basic concepts of habitat through challenging and engaging interdisciplinary, hands-on activities. The material is designed for K-8 educators working in traditional and non- traditional classrooms with the goals of increasing awareness of the ways habitats work and why they are important. This kit consists of four…

  12. Relating habitat and climatic niches in birds.

    PubMed

    Barnagaud, Jean-Yves; Devictor, Vincent; Jiguet, Frédéric; Barbet-Massin, Morgane; Le Viol, Isabelle; Archaux, Frédéric

    2012-01-01

    Predicting species' responses to the combined effects of habitat and climate changes has become a major challenge in ecology and conservation biology. However, the effects of climatic and habitat gradients on species distributions have generally been considered separately. Here, we explore the relationships between the habitat and thermal dimensions of the ecological niche in European common birds. Using data from the French Breeding Bird Survey, a large-scale bird monitoring program, we correlated the habitat and thermal positions and breadths of 74 bird species, controlling for life history traits and phylogeny. We found that cold climate species tend to have niche positions in closed habitats, as expected by the conjunction of the biogeographic history of birds' habitats, and their current continent-scale gradients. We also report a positive correlation between thermal and habitat niche breadths, a pattern consistent with macroecological predictions concerning the processes shaping species' distributions. Our results suggest that the relationships between the climatic and habitat components of the niche have to be taken into account to understand and predict changes in species' distributions.

  13. HABITAT MODELING APPROACHES FOR RESTORATION SITE SELECTION

    EPA Science Inventory

    Numerous modeling approaches have been used to develop predictive models of species-environment and species-habitat relationships. These models have been used in conservation biology and habitat or species management, but their application to restoration efforts has been minimal...

  14. Schoolyard Habitats[R] Site Planning Guide.

    ERIC Educational Resources Information Center

    National Wildlife Federation, Reston, VA.

    This document provides guidance for the creation of habitats on school grounds. Science activities, resources, and information on how to apply knowledge to the design, creation, and development of a habitat are presented. Contents include: (1) "Starting the Process"; (2) "Gathering Information: Site Inventory and Analysis"; (3)…

  15. Habitat Use and Selection by Giant Pandas.

    PubMed

    Hull, Vanessa; Zhang, Jindong; Huang, Jinyan; Zhou, Shiqiang; Viña, Andrés; Shortridge, Ashton; Li, Rengui; Liu, Dian; Xu, Weihua; Ouyang, Zhiyun; Zhang, Hemin; Liu, Jianguo

    2016-01-01

    Animals make choices about where to spend their time in complex and dynamic landscapes, choices that reveal information about their biology that in turn can be used to guide their conservation. Using GPS collars, we conducted a novel individual-based analysis of habitat use and selection by the elusive and endangered giant pandas (Ailuropoda melanoleuca). We constructed spatial autoregressive resource utilization functions (RUF) to model the relationship between the pandas' utilization distributions and various habitat characteristics over a continuous space across seasons. Results reveal several new insights, including use of a broader range of habitat characteristics than previously understood for the species, particularly steep slopes and non-forest areas. We also used compositional analysis to analyze habitat selection (use with respect to availability of habitat types) at two selection levels. Pandas selected against low terrain position and against the highest clumped forest at the at-home range level, but no significant factors were identified at the within-home range level. Our results have implications for modeling and managing the habitat of this endangered species by illustrating how individual pandas relate to habitat and make choices that differ from assumptions made in broad scale models. Our study also highlights the value of using a spatial autoregressive RUF approach on animal species for which a complete picture of individual-level habitat use and selection across space is otherwise lacking.

  16. Livestock grazing, wildlife habitat, and rangeland values

    Treesearch

    Paul R. Krausman; David E. Naugle; Michael R. Frisina; Rick Northrup; Vernon C. Bleich; William M. Block; Mark C. Wallace; Jeffrey D. Wright

    2009-01-01

    Livestock managers make and implement grazing management decisions to achieve a variety of objectives including livestock production, sustainable grazing, and wildlife habitat enhancement. Assessed values of grazing lands and ranches are often based on aesthetics and wildlife habitat or recreational values, which can exceed agricultural values, thus providing...

  17. Static Atmospheres in a Rotating Space Habitat.

    ERIC Educational Resources Information Center

    McKinley, John M.

    1980-01-01

    Discusses O'Neill's proposal for the colonization of space as it offers new problems in pure physics. Addresses specifically the distribution of the atmosphere in O'Neill's habitat and whether there will be enough air at the axis of rotation to allow human-powered flight, with particular reference to the habitat's "artificial gravity."…

  18. Forest wildlife habitat statistics for Maine - 1982

    Treesearch

    Robert T. Brooks; Thomas S. Frieswyk; Arthur Ritter

    1986-01-01

    A statistical report on the first forest wildlife habitat survey of Maine (1982). Eighty-five tables show estimates of forest area and several attributes of forest land wildlife habitat. Data are presented at two levels: state and geographic sampling unit.

  19. Habitat Use and Selection by Giant Pandas

    PubMed Central

    Hull, Vanessa; Zhang, Jindong; Huang, Jinyan; Zhou, Shiqiang; Viña, Andrés; Shortridge, Ashton; Li, Rengui; Liu, Dian; Xu, Weihua; Ouyang, Zhiyun; Zhang, Hemin; Liu, Jianguo

    2016-01-01

    Animals make choices about where to spend their time in complex and dynamic landscapes, choices that reveal information about their biology that in turn can be used to guide their conservation. Using GPS collars, we conducted a novel individual-based analysis of habitat use and selection by the elusive and endangered giant pandas (Ailuropoda melanoleuca). We constructed spatial autoregressive resource utilization functions (RUF) to model the relationship between the pandas' utilization distributions and various habitat characteristics over a continuous space across seasons. Results reveal several new insights, including use of a broader range of habitat characteristics than previously understood for the species, particularly steep slopes and non-forest areas. We also used compositional analysis to analyze habitat selection (use with respect to availability of habitat types) at two selection levels. Pandas selected against low terrain position and against the highest clumped forest at the at-home range level, but no significant factors were identified at the within-home range level. Our results have implications for modeling and managing the habitat of this endangered species by illustrating how individual pandas relate to habitat and make choices that differ from assumptions made in broad scale models. Our study also highlights the value of using a spatial autoregressive RUF approach on animal species for which a complete picture of individual-level habitat use and selection across space is otherwise lacking. PMID:27627805

  20. L-Reactor Habitat Mitigation Study

    SciTech Connect

    Not Available

    1988-02-01

    The L-Reactor Fish and Wildlife Resource Mitigation Study was conducted to quantify the effects on habitat of the L-Reactor restart and to identify the appropriate mitigation for these impacts. The completed project evaluated in this study includes construction of a 1000 acre reactor cooling reservoir formed by damming Steel Creek. Habitat impacts identified include a loss of approximately 3,700 average annual habitat units. This report presents a mitigation plan, Plan A, to offset these habitat losses. Plan A will offset losses for all species studied, except whitetailed deer. The South Carolina Wildlife and Marine Resources Department strongly recommends creation of a game management area to provide realistic mitigation for loss of deer habitats. 10 refs., 5 figs., 3 tabs. (MHB)

  1. Assessing habitat quality for a migratory songbird wintering in natural and agricultural habitats.

    PubMed

    Johnson, Matthew D; Sherry, Thomas W; Holmes, Richard T; Marra, Peter P

    2006-10-01

    As tropical forests are cleared, a greater proportion of migratory songbirds are forced to winter in agricultural and disturbed habitats, which, if poorer in quality than natural forests, could contribute to population declines. We compared demographic indicators of habitat quality for a focal species, the American Redstart (Setophaga ruticilla), wintering in Jamaican citrus orchards and shade coffee plantations with those in four natural habitats: mangrove, coastal scrub, coastal palm, and dry limestone forests. Demographic measures of habitat quality included density, age and sex ratio, apparent survival, and changes in body mass. Measures of habitat quality for redstarts in citrus and coffee habitats were generally intermediate between the highest (mangrove) and lowest (dry limestone) measurements from natural habitats. The decline in mean body mass over the winter period was a strong predictor of annual survival rate among habitats, and we suggest that measures of body condition coupled with survival data provide the best measures of habitat quality for nonbreeding songbirds. Density, which is far easier to estimate, was correlated with these more labor-intensive measures, particularly in the late winter when food is likely most limiting. Thus, local density may be useful as an approximation of habitat quality for wintering migrant warblers. Our findings bolster those of previous studies based on bird abundance that suggest arboreal agricultural habitats in the tropics can be useful for the conservation of generalist, insectivorous birds, including many migratory passerines such as redstarts.

  2. QUANTIFYING STRUCTURAL PHYSICAL HABITAT ATTRIBUTES USING LIDAR AND HYPERSPECTRAL IMAGERY

    EPA Science Inventory

    Structural physical habitat attributes include indices of stream size, channel gradient, substrate size, habitat complexity and cover, riparian vegetation cover and structure, anthropogenic disturbances and channel-riparian interaction. These habitat attributes will vary dependen...

  3. POWER TO DETECT REGIONAL TRENDS IN HABITAT CHARACTERISTICS

    EPA Science Inventory

    The condition of stream habitat draws considerable attention concerning the protection and recovery of salmonid populations in the West. Habitat degradation continues and substantial sums of money are spent on habitat restoration. However, aided by uncertainty concerning the ad...

  4. POWER TO DETECT REGIONAL TRENDS IN PHYSICAL HABITAT

    EPA Science Inventory

    The condition of stream habitat draws considerable attention concerning the protection and recovery of salmonid populations in the West. Habitat degradation continues and substantial sums of money are spent on habitat restoration. However, aided by uncertainty concerning the ad...

  5. NEKTON-HABITAT ASSOCIATIONS IN A PACIFIC NORTHWEST (USA) ESTUARY

    EPA Science Inventory

    Nekton−habitat associations were determined in Yaquina Bay, Oregon, United States, using a stratified-by-habitat, random, estuary-wide sampling design. Three habitats (intertidal eelgrass [Zostera marina], mud shrimp [Upogebia pugettensis], and ghost shrimp [Neotrypaea californie...

  6. Assessing patterns of fish demographics and habitat in stream networks

    EPA Science Inventory

    Effective habitat restoration planning requires correctly anticipating demographic responses to altered habitats. New applications of Passive Integrated Transponder (PIT) tag technology to fish-habitat research have provided critical insights into fish movement, growth, and surv...

  7. QUANTIFYING STRUCTURAL PHYSICAL HABITAT ATTRIBUTES USING LIDAR AND HYPERSPECTRAL IMAGERY

    EPA Science Inventory

    Structural physical habitat attributes include indices of stream size, channel gradient, substrate size, habitat complexity and cover, riparian vegetation cover and structure, anthropogenic disturbances and channel-riparian interaction. These habitat attributes will vary dependen...

  8. POWER TO DETECT REGIONAL TRENDS IN HABITAT CHARACTERISTICS

    EPA Science Inventory

    The condition of stream habitat draws considerable attention concerning the protection and recovery of salmonid populations in the West. Habitat degradation continues and substantial sums of money are spent on habitat restoration. However, aided by uncertainty concerning the ad...

  9. POWER TO DETECT REGIONAL TRENDS IN PHYSICAL HABITAT

    EPA Science Inventory

    The condition of stream habitat draws considerable attention concerning the protection and recovery of salmonid populations in the West. Habitat degradation continues and substantial sums of money are spent on habitat restoration. However, aided by uncertainty concerning the ad...

  10. NEKTON-HABITAT ASSOCIATIONS IN A PACIFIC NORTHWEST (USA) ESTUARY

    EPA Science Inventory

    Nekton−habitat associations were determined in Yaquina Bay, Oregon, United States, using a stratified-by-habitat, random, estuary-wide sampling design. Three habitats (intertidal eelgrass [Zostera marina], mud shrimp [Upogebia pugettensis], and ghost shrimp [Neotrypaea californie...

  11. Assessing patterns of fish demographics and habitat in stream networks

    EPA Science Inventory

    Effective habitat restoration planning requires correctly anticipating demographic responses to altered habitats. New applications of Passive Integrated Transponder (PIT) tag technology to fish-habitat research have provided critical insights into fish movement, growth, and surv...

  12. Modeling habitat dynamics accounting for possible misclassification

    USGS Publications Warehouse

    Veran, Sophie; Kleiner, Kevin J.; Choquet, Remi; Collazo, Jaime; Nichols, James D.

    2012-01-01

    Land cover data are widely used in ecology as land cover change is a major component of changes affecting ecological systems. Landscape change estimates are characterized by classification errors. Researchers have used error matrices to adjust estimates of areal extent, but estimation of land cover change is more difficult and more challenging, with error in classification being confused with change. We modeled land cover dynamics for a discrete set of habitat states. The approach accounts for state uncertainty to produce unbiased estimates of habitat transition probabilities using ground information to inform error rates. We consider the case when true and observed habitat states are available for the same geographic unit (pixel) and when true and observed states are obtained at one level of resolution, but transition probabilities estimated at a different level of resolution (aggregations of pixels). Simulation results showed a strong bias when estimating transition probabilities if misclassification was not accounted for. Scaling-up does not necessarily decrease the bias and can even increase it. Analyses of land cover data in the Southeast region of the USA showed that land change patterns appeared distorted if misclassification was not accounted for: rate of habitat turnover was artificially increased and habitat composition appeared more homogeneous. Not properly accounting for land cover misclassification can produce misleading inferences about habitat state and dynamics and also misleading predictions about species distributions based on habitat. Our models that explicitly account for state uncertainty should be useful in obtaining more accurate inferences about change from data that include errors.

  13. Does learning or instinct shape habitat selection?

    PubMed

    Nielsen, Scott E; Shafer, Aaron B A; Boyce, Mark S; Stenhouse, Gordon B

    2013-01-01

    Habitat selection is an important behavioural process widely studied for its population-level effects. Models of habitat selection are, however, often fit without a mechanistic consideration. Here, we investigated whether patterns in habitat selection result from instinct or learning for a population of grizzly bears (Ursus arctos) in Alberta, Canada. We found that habitat selection and relatedness were positively correlated in female bears during the fall season, with a trend in the spring, but not during any season for males. This suggests that habitat selection is a learned behaviour because males do not participate in parental care: a genetically predetermined behaviour (instinct) would have resulted in habitat selection and relatedness correlations for both sexes. Geographic distance and home range overlap among animals did not alter correlations indicating that dispersal and spatial autocorrelation had little effect on the observed trends. These results suggest that habitat selection in grizzly bears are partly learned from their mothers, which could have implications for the translocation of wildlife to novel environments.

  14. Habitat selection by juvenile Mojave Desert tortoises

    USGS Publications Warehouse

    Todd, Brian D; Halstead, Brian J.; Chiquoine, Lindsay P.; Peaden, J. Mark; Buhlmann, Kurt A.; Tuberville, Tracey D.; Nafus, Melia G.

    2016-01-01

    Growing pressure to develop public lands for renewable energy production places several protected species at increased risk of habitat loss. One example is the Mojave desert tortoise (Gopherus agassizii), a species often at the center of conflicts over public land development. For this species and others on public lands, a better understanding of their habitat needs can help minimize negative impacts and facilitate protection or restoration of habitat. We used radio-telemetry to track 46 neonate and juvenile tortoises in the Eastern Mojave Desert, California, USA, to quantify habitat at tortoise locations and paired random points to assess habitat selection. Tortoise locations near burrows were more likely to be under canopy cover and had greater coverage of perennial plants (especially creosote [Larrea tridentata]), more coverage by washes, a greater number of small-mammal burrows, and fewer white bursage (Ambrosia dumosa) than random points. Active tortoise locations away from burrows were closer to washes and perennial plants than were random points. Our results can help planners locate juvenile tortoises and avoid impacts to habitat critical for this life stage. Additionally, our results provide targets for habitat protection and restoration and suggest that diverse and abundant small-mammal populations and the availability of creosote bush are vital for juvenile desert tortoises in the Eastern Mojave Desert.

  15. Salmon River Habitat Enhancement, 1984 Annual Report.

    SciTech Connect

    Konopacky, Richard C.

    1986-04-01

    This report has four volumes: a Tribal project annual report (Part 1) and three reports (Parts 2, 3, and 4) prepared for the Tribes by their engineering subcontractor. The Tribal project annual report contains reports for four subprojects within Project 83-359. Subproject I involved habitat and fish inventories in Bear Valley Creek, Valley County, Idaho that will be used to evaluate responses to ongoing habitat enhancement. Subproject II is the coordination/planning activities of the Project Leader in relation to other BPA-funded habitat enhancement projects that have or will occur within the traditional Treaty (Fort Bridger Treaty of 1868) fishing areas of the Shoshone-Bannock Tribes, Fort Hall Reservation, Idaho. Subproject III involved habitat and fish inventories (pretreatment) and habitat problem identification on the Yankee Fork of the Salmon River (including Jordan Creek). Subproject IV during 1985 involved habitat problem identification in the East Fork of the Salmon River and habitat and fish inventories (pretreatment) in Herd Creek, a tributary to the East Fork.

  16. 75 FR 27708 - Stanford University Habitat Conservation Plan

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-05-18

    ... INTERIOR Fish and Wildlife Service RIN 0648-XV36 Stanford University Habitat Conservation Plan AGENCIES... University Habitat Conservation Plan (Plan), the Draft Environmental Impact Statement (DEIS) for...

  17. Selecting habitat management strategies on refuges

    USGS Publications Warehouse

    Schroeder, Richard L.; King, Wayne J.; Cornely, John E.

    1998-01-01

    This report is a joint effort of the Biological Resources Division, U.S. Geological Survey and the U.S. Fish and Wildlife Service (FWS) to provide National Wildlife Refuge (NWR) managers guidance on the selection and evaluation of habitat management strategies to meet stated objectives. The FWS recently completed a handbook on writing refuge management goals and objectives (U.S. Fish and Wildlife Service 1996a). the National Wildlife Refuge System Improvement Act of 1997 requires that National Wildlife Refuge System (NWRS) lands be managed according to approved Comprehensive Conservation Plans to guide management decisions and devise strategies for achieving refuge unit purposes and meeting the NWRS mission. It is expected that over the next several years most refuges will develop new or revised refuge goals and objectives for directing their habitat management strategies. This paper outlines the steps we recommend in selecting and evaluating habitat management strategies to meet specific refuge habitat objectives. We selected two examples to illustrate the process. Although each refuge is unique and will require specific information and solutions, these two examples can be used as guidance when selecting and evaluating habitat management strategies for other refuge resources: Example 1. Management of floodplain woods habitat for forest interior birds. The biological recourse of concern is the quality and quantity of floodplain woods habitat for eastern forest interior birds in the Cypress Creek NWR (U.S. Fish and Wildlife Service 1996b). Example 2. Management of habitat for biodiversity: Historical landscape proportions. The biological resource of concern is the change in diversity associated with man-induced changes in the distribution and abundance of habitat types at the Minnesota Valley NWR (U.S. Fish and Wildlife Service 1996c).

  18. Urban and agricultural pesticide inputs to a critical habitat for the threatened delta smelt (Hypomesus transpacificus).

    PubMed

    Weston, Donald P; Asbell, Aundrea M; Lesmeister, Sarah A; Teh, Swee J; Lydy, Michael J

    2014-04-01

    The Cache Slough complex is an area of tidal sloughs in the Sacramento-San Joaquin River Delta of California (USA), and is surrounding by irrigated agricultural lands. Among the species of concern in the area is the delta smelt (Hypomesus transpacificus), a federally listed threatened species. Releases of the organophosphate insecticide chlorpyrifos and pyrethroid insecticides were examined to determine whether they represented a threat to the copepods on which delta smelt feed (Eurytemora affinis and Pseudodiaptomus forbesi) and to aquatic life in general, represented by the standard testing organism, Hyalella azteca. There was a single incident of toxicity to H. azteca as a result of discharge of agricultural irrigation water containing chlorpyrifos. Pyrethroids were not found in samples collected during the dry season. Following rain events, however, the waters of western Cache Slough repeatedly became toxic to H. azteca because of the pyrethroids bifenthrin and cyhalothrin. The 96-h median lethal concentrations (LC50s) for E. affinis and P. forbesi for the pyrethroids bifenthrin and cyhalothrin were 16.7 ng/L to 19.4 ng/L when tested at 20 °C. However, their LC50s may be 5 mg/L to 10 ng/L at in situ temperatures of the Cache Slough, comparable to the peak bifenthrin concentration observed. The dominant pyrethroid source appeared to be urban runoff entering a creek 21 km upstream of Cache Slough. Pyrethroids of urban origin were supplemented by agricultural inputs of pyrethroids and chlorpyrifos as the creek flowed toward Cache Slough.

  19. Ghosts of habitats past: environmental carry-over effects drive population dynamics in novel habitat.

    PubMed

    Van Allen, Benjamin G; Rudolf, Volker H W

    2013-05-01

    The phenotype of adults can be strongly influenced by the environmental conditions experienced during development. Consequently, variation in habitat quality across space and through time also leads to differences in the phenotypes of adults. This could create carry-over effects where differences in the natal habitat quality of colonizers influence population dynamics in new habitats. We tested this hypothesis experimentally by simulating dispersal of Tribolium castaneum from low- or high-quality natal habitat into new patches of low- or high-quality habitat. Differences in the natal habitat quality of colonizers altered population growth trajectories and led to carrying capacities that differed by up to 63% within a habitat type, indicating that patch dynamics are determined by the interaction of past and current habitat quality. Interestingly, even after multiple generations, the natal habitat of colonizers determined differences in adult traits that were related to density-dependent population regulation. These changes in adult phenotype could at least partially explain why carry-over effects continued to alter population dynamics for multiple generations until the end of the experiment. These results highlight the importance of variable habitat quality and carry-over effects for population dynamics.

  20. Invadosomes in their natural habitat

    PubMed Central

    Génot, Elisabeth; Gligorijevic, Bojana

    2014-01-01

    Podosomes and invadopodia (collectively known as invadosomes) are small, F-actin-rich protrusions that are located at points of cell-ECM contacts and endow cells with invasive capabilities. So far, they have been identified in human or murine immune (myelomonocytic), vascular and cancer cells. The overarching reason for studying invadosomes is their connection to human disease. For example, macrophages and osteoclasts lacking Wiskott-Aldrich syndrome protein (WASp) are not able to form podosomes, and this leads to altered macrophage chemotaxis and defective bone resorption by osteoclasts. In contrast, the ability of cancer cells to form invadopodia is associated with high invasive and metastatic potentials. While invadosome composition, dynamics and signalling cascades leading to their assembly can be followed easily in in vitro assays, studying their contribution to pathophysiological processes in situ remains challenging. A number of recent papers have started to address this issue and describe invadosomes in situ in mouse models of cancer, cardiovascular disease and angiogenesis. In addition, in vivo invadosome homologs have been reported in developmental model systems such as C. elegans, zebrafish and sea squirt. Comparative analyses among different invasion mechanisms as they happen in their natural habitats, i.e., in situ, may provide an outline of the invadosome evolutionary history, and guide our understanding of the roles of the invasion process in pathophysiology versus development. PMID:25457677

  1. Invadosomes in their natural habitat.

    PubMed

    Génot, Elisabeth; Gligorijevic, Bojana

    2014-10-01

    Podosomes and invadopodia (collectively known as invadosomes) are small, F-actin-rich protrusions that are located at points of cell-ECM contacts and endow cells with invasive capabilities. So far, they have been identified in human or murine immune (myelomonocytic), vascular and cancer cells. The overarching reason for studying invadosomes is their connection to human disease. For example, macrophages and osteoclasts lacking Wiskott-Aldrich syndrome protein (WASp) are not able to form podosomes, and this leads to altered macrophage chemotaxis and defective bone resorption by osteoclasts. In contrast, the ability of cancer cells to form invadopodia is associated with high invasive and metastatic potentials. While invadosome composition, dynamics and signaling cascades leading to their assembly can be followed easily in in vitro assays, studying their contribution to pathophysiological processes in situ remains challenging. A number of recent papers have started to address this issue and describe invadosomes in situ in mouse models of cancer, cardiovascular disease and angiogenesis. In addition, in vivo invadosome homologs have been reported in developmental model systems such as C. elegans, zebrafish and sea squirt. Comparative analyses among different invasion mechanisms as they happen in their natural habitats, i.e., in situ, may provide an outline of the invadosome evolutionary history, and guide our understanding of the roles of the invasion process in pathophysiology versus development. Copyright © 2014 Elsevier GmbH. All rights reserved.

  2. High nutrient pulses, tidal mixing and biological response in a small California estuary: Variability in nutrient concentrations from decadal to hourly time scales

    USGS Publications Warehouse

    Caffrey, J.M.; Chapin, T.P.; Jannasch, H.W.; Haskins, J.C.

    2007-01-01

    Elkhorn Slough is a small estuary in Central California, where nutrient inputs are dominated by runoff from agricultural row crops, a golf course, and residential development. We examined the variability in nutrient concentrations from decadal to hourly time scales in Elkhorn Slough to compare forcing by physical and biological factors. Hourly data were collected using in situ nitrate analyzers and water quality data sondes, and two decades of monthly monitoring data were analyzed. Nutrient concentrations increased from the mid 1970s to 1990s as pastures and woodlands were converted to row crops and population increased in the watershed. Climatic variability was also a significant factor controlling interannual nutrient variability, with higher nutrient concentrations during wet than drought years. Elkhorn Slough has a Mediterranean climate with dry and rainy seasons. Dissolved inorganic nitrogen (DIN) concentrations were relatively low (10-70 ??mol L-1) during the dry season and high (20-160 ??mol L-1) during the rainy season. Dissolved inorganic phosphorus (DIP) concentrations showed the inverse pattern, with higher concentrations during the dry season. Pulsed runoff events were a consistent feature controlling nitrate concentrations during the rainy season. Peak nitrate concentrations lagged runoff events by 1 to 6 days. Tidal exchange with Monterey Bay was also an important process controlling nutrient concentrations, particularly near the mouth of the Slough. Biological processes had the greatest effect on nitrate concentrations during the dry season and were less important during the rainy season. While primary production was enhanced by nutrient pulses, chlorophyll a concentrations were not. We believe that the generally weak biological response compared to the strong physical forcing in Elkhorn Slough occurred because the short residence time and tidal mixing rapidly diluted nutrient pulses. ?? 2006 Elsevier Ltd. All rights reserved.

  3. Can settlement in natal-like habitat explain maladaptive habitat selection?

    PubMed Central

    Piper, Walter H.; Palmer, Michael W.; Banfield, Nathan; Meyer, Michael W.

    2013-01-01

    The study of habitat selection has long been influenced by the ideal free model, which maintains that young adults settle in habitat according to its inherent quality and the density of conspecifics within it. The model has gained support in recent years from the finding that conspecifics produce cues inadvertently that help prebreeders locate good habitat. Yet abundant evidence shows that animals often fail to occupy habitats that ecologists have identified as those of highest quality, leading to the conclusion that young animals settle on breeding spaces by means not widely understood. Here, we report that a phenomenon virtually unknown in nature, natal habitat preference induction (NHPI), is a strong predictor of territory settlement in both male and female common loons (Gavia immer). NHPI causes young animals to settle on natal-like breeding spaces, but not necessarily those that maximize reproductive success. If widespread, NHPI might explain apparently maladaptive habitat settlement. PMID:23804619

  4. Lunar and Planetary Bases, Habitats, and Colonies

    NASA Technical Reports Server (NTRS)

    2004-01-01

    This special bibliography includes the design and construction of lunar and Mars bases, habitats, and settlements; construction materials and equipment; life support systems; base operations and logistics; thermal management and power systems; and robotic systems.

  5. Habitat Suitability Index Models: Gray squirrel

    USGS Publications Warehouse

    Allen, Arthur W.

    1982-01-01

    The gray squirrel (Sciurus carolinensis)inhabits hardwood and mixed hardwood-coniferous forests (Uhlig 1955; Golley 1962). Although they may occur in a variety of forested habitat types, large, densely forested areas are preferred (Taylor 1974).

  6. Evaluation of a habitat suitability index model

    USGS Publications Warehouse

    Farmer, A.H.; Cade, B.S.; Stauffer, D.F.

    2002-01-01

    We assisted with development of a model for maternity habitat of the Indiana bat (Myotis soda/is), for use in conducting assessments of projects potentially impacting this endangered species. We started with an existing model, modified that model in a workshop, and evaluated the revised model, using data previously collected by others. Our analyses showed that higher indices of habitat suitability were associated with sites where Indiana bats were present and, thus, the model may be useful for identifying suitable habitat. Utility of the model, however, was based on a single component-density of suitable roost trees. Percentage of landscape in forest did not allow differentiation between sites occupied and not occupied by Indiana bats. Moreover, in spite of a general opinion by participants in the workshop that bodies of water were highly productive feeding areas and that a diversity of feeding habitats was optimal, we found no evidence to support either hypothesis.

  7. Seeding considerations in restoring big sagebrush habitat

    Treesearch

    Scott M. Lambert

    2005-01-01

    This paper describes methods of managing or seeding to restore big sagebrush communities for wildlife habitat. The focus is on three big sagebrush subspecies, Wyoming big sagebrush (Artemisia tridentata ssp. wyomingensis), basin big sagebrush (Artemisia tridentata ssp. tridentata), and mountain...

  8. Protostelids and myxomycetes isolated from aquatic habitats.

    PubMed

    Lindley, Lora A; Stephenson, Steven L; Spiegel, Frederick W

    2007-01-01

    Protostelids and myxomycetes have been isolated from dead plant parts in many different habitats, including tropical rain forests and deserts. However underwater habitats largely have been overlooked. The purpose of this study was to determine whether protostelids do occur in aquatic habitats and to survey the myxomycetes associated with these habitats. Protostelids and myxomycetes were isolated from substrates collected from just above and just below the surface of the water. Several species of both groups were present, and their distributions above and below the water were different. It is not surprising that the trophic cells of slime molds occur in ponds because they are known to grow in films of water. However these findings are significant because this is the first study to demonstrate clearly the occurrence of protostelids in underwater environments and one of the few surveys of myxomycetes from aquatic systems.

  9. Habitat destruction and the extinction debt revisited

    SciTech Connect

    Loehle, C.

    1996-02-01

    A very important analysis of the problem of habitat destruction concluded that such destruction may lead to an extinction debt, which is the irreversible loss of species following a prolonged transient or delay. An error in interpretation of this model led the authors to apply the results to all types of habitat destruction, but in fact the model applies only to an across-the-board decrease in fecundity, not to disturbances. For repeated, spatially random disturbance, a different model applies. For habitat destruction on regional scales (reduction in ecosystem area without disturbance in remnant areas), one must, in contrast, apply species-area relations based on the distribution of different habitat types (e.g., elevational and rainfall gradients, physiographic and edaphic variability). The error in interpretation of the basic model is presented, followed by clarification of model usage and development of a new model that applies to disturbance events.

  10. EPA'S BENTHIC HABITAT DATA FOR YAQUINA ESTUARY

    EPA Science Inventory

    Scientists at EPA's National Health and Environmental Effects Research Laboratory, Western Ecology Division (WED) have been studying seafloor (benthic) habitats in Yaquina estuary for several years. Those studies were conducted as parts of several research projects, including: e...

  11. EPA'S BENTHIC HABITAT DATA FOR YAQUINA ESTUARY

    EPA Science Inventory

    Scientists at EPA's National Health and Environmental Effects Research Laboratory, Western Ecology Division (WED) have been studying seafloor (benthic) habitats in Yaquina estuary for several years. Those studies were conducted as parts of several research projects, including: e...

  12. Wildlife guilds in Arizona desert habitats

    USGS Publications Warehouse

    Short, Henry L.

    1983-01-01

    This report summarizes information produced from Interagency Agreement No. AA-851-IA1-27 between the Bureau of Land Management (BLM), USDI, and the Fish and Wildlife Service (FWS), USDI. The contract was instrumental in the final development of wildlife guilds for the Hualapai-Aquarius planning area of the BLM in westcentral Arizona, reported herein. The Arizona study area was selected for the application of the guilding technology because a thorough assessment of the floral and faunal resources had recently occurred in conjunction with the development of a grazing Environmental Impact Statement (EIS). Thus, the association of wildlife species with habitat type was well known, which aided in the compilation of the data base necessary for the development of guilds. Some data were also available that described the vegetative structure of habitats. This was useful in the development of a model that evaluated the quality of habitat on the basis of the diversity of cover in those habitats (Short 1982).

  13. Habitat triage for exploited fishes: Can we identify essential “Essential Fish Habitat?”

    NASA Astrophysics Data System (ADS)

    Levin, Phillip S.; Stunz, Gregory W.

    2005-07-01

    There is little doubt that estuarine habitat is important for some exploited fish species, at some times, and in some places. However, it is also clear that we do not have enough resources to conserve or restore all estuarine habitat. Consequently, a simple, quantitative and transparent approach to prioritizing estuarine habitat management is required. Here, we present a general framework for identifying critical habitats of exploited fishes. Our approach requires three basic steps: (1) develop stage-structured models and identify sensitive life history stages; (2) determine what habitats, if any, are important to these stages; and (3) identify sites in which high densities of critical life stages occur in important habitat. We will illustrate the utility of this approach using red drum, Sciaenops ocellatus. Results of a simulation-based sensitivity analysis of a stage-structured matrix model show that most of the variability in population growth rate ( λ) of red drum is explained by larval and juvenile survival rates. Thus, this approach indicates that larval/juvenile red drum habitat should be given higher priority for conservation and/or restoration than habitats used by other life history stages. To illustrate the potential importance of juvenile habitat to red drum, we modeled the growth of a hypothetical red drum population using different population matrices as manifestations of varying habitat conditions. These numerical experiments revealed that restoration of both marsh and seagrass habitats would yield a ca. 24% increase in post-settlement survival and would result in a ca. 2% increase in λ—an increase sufficient to stem a long-term population decline. Our results illustrate that protection of fish habitat depends not only on protecting sites where fish occur but also on protecting the ecological processes that allow populations to expand. Quantitative and synthetic analyses of ecological data are a first step in this direction.

  14. Subseafloor basalts as fungal habitats

    NASA Astrophysics Data System (ADS)

    Ivarsson, M.; Bengtson, S.

    2013-12-01

    The oceanic crust makes up the largest potential habitat for life on Earth, yet next to nothing is known about the abundance, diversity and ecology of its biosphere. Our understanding of the deep biosphere of subseafloor crust is, with a few exceptions, based on a fossil record. Surprisingly, a majority of the fossilized microorganisms have been interpreted or recently re-interpreted as remnants of fungi rather than prokaryotes. Even though this might be due to a bias in fossilization the presence of fungi in these settings can not be neglected. We have examined fossilized microorganisms in drilled basalt samples collected at the Emperor Seamounts in the Pacific Ocean. Synchrotron-radiation X-ray tomography microscopy (SRXTM) studies has revealed a complex morphology and internal structure that corresponds to characteristic fungal morphology. Chitin was detected in the fossilized hyphae, which is another strong argument in favour of a fungal interpretation. Chitin is absent in prokaryotes but a substantial constituent in fungal cell walls. The fungal colonies consist of both hyphae and yeast-like growth states as well as resting structures and possible fruit bodies, thus, the fungi exist in vital colonies in subseafloor basalts. The fungi have also been involved in extensive weathering of secondary mineralisations. In terrestrial environments fungi are known as an important geobiological agent that promotes mineral weathering and decomposition of organic matter, and they occur in vital symbiosis with other microorganisms. It is probable to assume that fungi would play a similar role in subseafloor basalts and have great impact on the ecology and on biogeochemical cycles in such environments.

  15. An interpolation method for stream habitat assessments

    USGS Publications Warehouse

    Sheehan, Kenneth R.; Welsh, Stuart A.

    2015-01-01

    Interpolation of stream habitat can be very useful for habitat assessment. Using a small number of habitat samples to predict the habitat of larger areas can reduce time and labor costs as long as it provides accurate estimates of habitat. The spatial correlation of stream habitat variables such as substrate and depth improves the accuracy of interpolated data. Several geographical information system interpolation methods (natural neighbor, inverse distance weighted, ordinary kriging, spline, and universal kriging) were used to predict substrate and depth within a 210.7-m2 section of a second-order stream based on 2.5% and 5.0% sampling of the total area. Depth and substrate were recorded for the entire study site and compared with the interpolated values to determine the accuracy of the predictions. In all instances, the 5% interpolations were more accurate for both depth and substrate than the 2.5% interpolations, which achieved accuracies up to 95% and 92%, respectively. Interpolations of depth based on 2.5% sampling attained accuracies of 49–92%, whereas those based on 5% percent sampling attained accuracies of 57–95%. Natural neighbor interpolation was more accurate than that using the inverse distance weighted, ordinary kriging, spline, and universal kriging approaches. Our findings demonstrate the effective use of minimal amounts of small-scale data for the interpolation of habitat over large areas of a stream channel. Use of this method will provide time and cost savings in the assessment of large sections of rivers as well as functional maps to aid the habitat-based management of aquatic species.

  16. Space habitats. [prognosis for space colonization

    NASA Technical Reports Server (NTRS)

    Johnson, R. D.

    1978-01-01

    Differences between space industrialization and space colonization are outlined along with the physiological, psychological, and esthetic needs of the inhabitants of a space habitat. The detrimental effects of zero gravity on human physiology are reviewed, and the necessity of providing artificial gravity, an acceptable atmosphere, and comfortable relative humidity and temperature in a space habitat is discussed. Consideration is also given to social organization and governance, supply of food and water, and design criteria for space colonies.

  17. Columbia County Habitat for Humanity Passive Townhomes

    SciTech Connect

    None, None

    2016-03-01

    Columbia County Habitat for Humanity (CCHH) (New York, Climate Zone 5A) built a pair of townhomes to Passive House Institute U.S. (PHIUS+ 2015) criteria to explore approaches for achieving Passive House performance (specifically with respect to exterior wall, space-conditioning, and ventilation strategies) within the labor and budget context inherent in a Habitat for Humanity project. CCHH’s goal is to eventually develop a cost-justified Passive House prototype design for future projects.

  18. Space habitats. [prognosis for space colonization

    NASA Technical Reports Server (NTRS)

    Johnson, R. D.

    1978-01-01

    Differences between space industrialization and space colonization are outlined along with the physiological, psychological, and esthetic needs of the inhabitants of a space habitat. The detrimental effects of zero gravity on human physiology are reviewed, and the necessity of providing artificial gravity, an acceptable atmosphere, and comfortable relative humidity and temperature in a space habitat is discussed. Consideration is also given to social organization and governance, supply of food and water, and design criteria for space colonies.

  19. Vegetational designs for insect-habitat management

    NASA Astrophysics Data System (ADS)

    Altieri, Miguel A.

    1983-01-01

    Insect habitats in anthropocentric ecosystems consist of crop plants or forest trees and the coexisting non-crop vegetation. The manipulation of the spatial and temporal arrangement of these plant communities can trigger direct or indirect effects on insect pest populations and their associated natural enemy complexes. In this article habitat management is viewed as a technique to design plant associations that support populations of natural enemies or that exert deterrent effects on herbivorous insects.

  20. Beyond the border: effects of an expanding algal habitat on the fauna of neighbouring habitats.

    PubMed

    Lanham, Brendan S; Gribben, Paul E; Poore, Alistair G B

    2015-05-01

    The impacts of novel habitat-forming organisms on associated fauna have been difficult to predict, and may affect the fauna of neighbouring habitats due to changes in the spatial configuration of habitat patches of differing quality. Here, we test whether the localised expansion of a native habitat-forming macroalga, Caulerpa filiformis, on subtidal reefs can affect the abundance of fauna associated with a neighbouring macroalgal habitat. C. filiformis was a functionally distinct habitat for fauna, and the total abundance of epifauna associated with the resident alga, Sargassum linearifolium, was reduced at some sites when in close proximity to or surrounded by C. filiformis. Experimental manipulation of habitat configuration demonstrated that the low abundance of gastropods on S. linearifolium when surrounded by C. filiformis was likely explained by C. filiformis acting as a physical dispersal barrier for mobile fauna. Changes to the spatial configuration of novel and resident habitats can thus affect the abundance of fauna in addition to the direct replacement of habitats by species undergoing range expansions or increasing in abundance. Copyright © 2015 Elsevier Ltd. All rights reserved.

  1. Speciation through the learning of habitat features.

    PubMed

    Beltman, J B; Haccou, P

    2005-05-01

    Learning of environmental features can influence both mating behaviour and the location where young are produced. This may lead to speciation in three steps: (i) colonization of a new habitat, (ii) genetic divergence of the two groups by adaptation to the habitats, and (iii) a decrease of genetic mixing between the lineages (similar to reinforcement). In a previous paper we showed that steps (i) and (ii) occur readily for a wide range of fixed mating and habitat preferences. Here, we study whether this can ultimately lead to speciation through selective changes in these preferences. We show that this indeed occurs, and, furthermore, it is very general: for a large class of models there is selection toward producing young more frequently in the natal habitat. Once habitat preference is strong, there is selection toward stronger assortative mating. Even when steps (i) and (ii) initially fail, genetic divergence may succeed at a later evolutionary stage, after which a decrease of genetic mixing completes speciation. Our results show that speciation by the learning of habitat features is an extremely effective mechanism.

  2. Lunar/Mars Surface Habitat Mockups Project

    NASA Technical Reports Server (NTRS)

    Tri, Terry O.; Daues, Katherine R.

    2005-01-01

    Surface habitats play a centric role with respect to integration of the crew operations and supporting surface systems for external operations on the moon and Mars. Up to now the only planetary surface habitat NASA has ever developed is the 2-person, 3-day duration Lunar Module from the 1960 s-era Apollo Program. Today s National Vision for Space Exploration pushes far beyond the safety, performance and operational requirements of the Lunar Module, and NASA needs to develop a basis for making habitat design decisions Experience has shown that using mockups very early in a project s life cycle is extremely beneficial, providing data that influences requirements for human design, volumetrics, functionality, systems hardware and operations. Evaluating and comparing a variety of habitat configurations will provide NASA with a cost-effective basis for trades to support lunar and Martian habitat design selection. This paper describes the NASA project that recently has been created to undertake the development and evaluation of a series of planetary surface habitat mockups. This project is in direct response to the Advanced Space Platforms and Systems (ASPS) Element Program s request for novel systems approaches for robust and reconfigurable habitation systems.

  3. Breeding habitats of mosquitoes in Goa.

    PubMed

    Kulkarni, S M; Naik, P S

    1989-03-01

    Studies carried out in Goa from 1986 to 1987 revealed immature stages of 43 species of mosquitoes. Breeding habitats were divided into three categories, viz., (i) Ground water habitats consisting of ground pools and tanks, rocky pools, paddy fields and stream beds, yielding 30 species; (ii) Plant habitats consisting of tree holes and fallen coconut shells and leaf sheaths yielding 20 species; and (iii) Domestic/peridomestic habitats consisting of cement tanks, glass, earthen, metallic containers and tyres yielding 11 species. Five species viz., Anopheles subpictus, Aedes albopictus, Armigeres subalbatus, Culex quinquefasciatus and Cx. pallidothorax were found in all three types of habitats. Cx. tritaeniorhynchus preferred to breed in ground pools and paddy fields but was found in domestic cement tanks and ground tanks in adverse season. Majority of the anophelines and culicines were found in ground water habitats. Five out of 11 species of Aedes were found in tree holes. Aedes aegypti and Toxorhynchites splendens were found only in discarded tyres. Three species of the genus Uranotaenia, viz., U. bicolor, U. stricklandi and U. campestris were recorded from stream beds and plant containers.

  4. Lunar Habitat Optimization Using Genetic Algorithms

    NASA Technical Reports Server (NTRS)

    SanScoucie, M. P.; Hull, P. V.; Tinker, M. L.; Dozier, G. V.

    2007-01-01

    Long-duration surface missions to the Moon and Mars will require bases to accommodate habitats for the astronauts. Transporting the materials and equipment required to build the necessary habitats is costly and difficult. The materials chosen for the habitat walls play a direct role in protection against each of the mentioned hazards. Choosing the best materials, their configuration, and the amount required is extremely difficult due to the immense size of the design region. Clearly, an optimization method is warranted for habitat wall design. Standard optimization techniques are not suitable for problems with such large search spaces; therefore, a habitat wall design tool utilizing genetic algorithms (GAs) has been developed. GAs use a "survival of the fittest" philosophy where the most fit individuals are more likely to survive and reproduce. This habitat design optimization tool is a multiobjective formulation of up-mass, heat loss, structural analysis, meteoroid impact protection, and radiation protection. This Technical Publication presents the research and development of this tool as well as a technique for finding the optimal GA search parameters.

  5. Salmon River Habitat Enhancement, 1989 Annual Report.

    SciTech Connect

    Rowe, Mike

    1989-04-01

    This project was funded by the Bonneville Power Administration (BPA). The annual report contains three individual subproject papers detailing tribal fisheries work completed during the summer and fall of 1989. Subproject 1 contains summaries of evaluation/monitoring efforts associated with the Bear Valley Creek, Idaho enhancement project. Subproject 2 contains an evaluation of the Yankee Fork of the Salmon River habitat enhancement project. This report has been sub-divided into two parts: Part 1; stream evaluation and Part 2; pond series evaluation. Subproject 3 concerns the East Fork of the Salmon River, Idaho. This report summarizes the evaluation of the project to date including the 1989 pre-construction evaluation conducted within the East Fork drainage. Dredge mining has degraded spawning and rearing habitat for chinook salmon and steelhead trout in the Yankee Fork drainage of the Salmon River and in Bear Valley Creek. Mining, agricultural, and grazing practices degraded habitat in the East Fork of the Salmon River. Biological monitoring of the success of habitat enhancement for Bear Valley Creek and Yankee Fork are presented in this report. Physical and biological inventories prior to habitat enhancement in East Fork were also conducted. Four series of off-channel ponds of the Yankee Fork are shown to provide effective rearing habitat for chinook salmon. 45 refs., 49 figs., 24 tabs.

  6. Lunar/Mars Surface Habitat Mockups Project

    NASA Technical Reports Server (NTRS)

    Tri, Terry O.; Daues, Katherine R.

    2005-01-01

    Surface habitats play a centric role with respect to integration of the crew operations and supporting surface systems for external operations on the moon and Mars. Up to now the only planetary surface habitat NASA has ever developed is the 2-person, 3-day duration Lunar Module from the 1960 s-era Apollo Program. Today s National Vision for Space Exploration pushes far beyond the safety, performance and operational requirements of the Lunar Module, and NASA needs to develop a basis for making habitat design decisions Experience has shown that using mockups very early in a project s life cycle is extremely beneficial, providing data that influences requirements for human design, volumetrics, functionality, systems hardware and operations. Evaluating and comparing a variety of habitat configurations will provide NASA with a cost-effective basis for trades to support lunar and Martian habitat design selection. This paper describes the NASA project that recently has been created to undertake the development and evaluation of a series of planetary surface habitat mockups. This project is in direct response to the Advanced Space Platforms and Systems (ASPS) Element Program s request for novel systems approaches for robust and reconfigurable habitation systems.

  7. Nesting habitat of Mexican spotted owls in the Sacramento Mountains

    Treesearch

    Joseph L. Ganey; Darrell L. Apprill; Todd A. Rawlinson; Sean C. Kyle; Ryan S. Jonnes; James P. Ward

    2013-01-01

    Understanding the habitat relationships of rare species is critical to conserving populations and habitats of those species. Nesting habitat is suspected to limit distribution of the threatened Mexican spotted owl (Strix occidentalis lucida), and may vary among geographic regions. We studied selection of nesting habitat by Mexican spotted owls within their home ranges...

  8. Anthropogenic areas as incidental substitutes for original habitat.

    PubMed

    Martínez-Abraín, Alejandro; Jiménez, Juan

    2016-06-01

    One speaks of ecological substitutes when an introduced species performs, to some extent, the ecosystem function of an extirpated native species. We suggest that a similar case exists for habitats. Species evolve within ecosystems, but habitats can be destroyed or modified by natural and human-made causes. Sometimes habitat alteration forces animals to move to or remain in a suboptimal habitat type. In that case, the habitat is considered a refuge, and the species is called a refugee. Typically refugee species have lower population growth rates than in their original habitats. Human action may lead to the unintended generation of artificial or semiartificial habitat types that functionally resemble the essential features of the original habitat and thus allow a population growth rate of the same magnitude or higher than in the original habitat. We call such areas substitution habitats and define them as human-made habitats within the focal species range that by chance are partial substitutes for the species' original habitat. We call species occupying a substitution habitat adopted species. These are 2 new terms in conservation biology. Examples of substitution habitats are dams for European otters, wheat and rice fields for many steppeland and aquatic birds, and urban areas for storks, falcons, and swifts. Although substitution habitats can bring about increased resilience against the agents of global change, the conservation of original habitat types remains a conservation priority. © 2016 Society for Conservation Biology.

  9. NEKTON-HABITAT ASSOCIATIONS IN YAQUINA BAY, OREGON

    EPA Science Inventory

    Habitat-based ecological risk assessments rely, in part, on estimates of the ecological value of the habitats at risk. To estimate estuarine habitat values with respect to the nekton (small fish, crabs and other invertebrates), we determined nekton-habitat associations in four i...

  10. Pairing success of Kirtland's warblers in marginal vs. suitable habitat

    Treesearch

    John R. Probst; Jack P. Hayes

    1987-01-01

    We compared pairing success of male Kirtland's Warblers (Dendroica kirtlandii) in different habitats to test the hypothesis that a lower proportion of males in marginal habitat are mated. Fewer than 60% of the males in marginal habitat were paired, but 95% of the males in suitable habitat were paired. We estimated the overall pairing success of...

  11. Forest habitat loss, fragmentation, and red-cockaded woodpecker populations

    Treesearch

    Richard N. Conner; D. Craig Rudolph

    1991-01-01

    Loss of mature forest habitat was measured around Red-cockaded Woodpecker (Picoides borealis) cavity tree clusters (colonies) in three National Forests in eastern Texas. Forest removal results in a loss of foraging habitat and causes habitat fragmentation of the remaining mature forest. Habitat loss was negatively associated with woodpecker group size in small...

  12. 50 CFR 424.12 - Criteria for designating critical habitat.

    Code of Federal Regulations, 2012 CFR

    2012-10-01

    ... 50 Wildlife and Fisheries 11 2012-10-01 2012-10-01 false Criteria for designating critical habitat... LISTING ENDANGERED AND THREATENED SPECIES AND DESIGNATING CRITICAL HABITAT Revision of the Lists § 424.12 Criteria for designating critical habitat. (a) Critical habitat shall be specified to the maximum extent...

  13. 50 CFR 424.12 - Criteria for designating critical habitat.

    Code of Federal Regulations, 2011 CFR

    2011-10-01

    ... 50 Wildlife and Fisheries 9 2011-10-01 2011-10-01 false Criteria for designating critical habitat... LISTING ENDANGERED AND THREATENED SPECIES AND DESIGNATING CRITICAL HABITAT Revision of the Lists § 424.12 Criteria for designating critical habitat. (a) Critical habitat shall be specified to the maximum extent...

  14. Habitat usage by prairie grouse on the Sheyenne National Grasslands

    Treesearch

    Llewellyn L. Manske; William T. Barker

    1988-01-01

    Prairie grouse habitat usage was observed for six years. Spring and summer habitat usage was primarily in the upland and midland grassland habitat types. Habitat usage shifted during the fall and winter to cropland and associated tree shelterbelts. The switchgrass plant community was the primary concealment cover for nesting and roosting. Cropland and associated tree...

  15. Developing management guidelines for cerulean warbler breeding habitat

    Treesearch

    Paul B. Hamel; Kenneth V. Rosenberg

    2007-01-01

    Recovery activities for species of conservation concern may be directed to acquire and protect habitats known to contain the species, or to produce suitable habitats or locations suspected to be capable of supporting populations of the species. Management of those habitats ultimately becomes necessary, especially where production of additional habitats is deemed...

  16. NEKTON-HABITAT ASSOCIATIONS IN YAQUINA BAY, OREGON

    EPA Science Inventory

    Habitat-based ecological risk assessments rely, in part, on estimates of the ecological value of the habitats at risk. To estimate estuarine habitat values with respect to the nekton (small fish, crabs and other invertebrates), we determined nekton-habitat associations in four i...

  17. Habitat fragmentation in the temperate zone: a perspective for managers

    Treesearch

    John Faaborg; Margaret Brittingham; Therese Donovan; John Blake

    1993-01-01

    Habitat fragmentation occurs when a large, fairly continuous tract of vegetation is converted to other vegetation types such that only scattered fragments of the original type remain. Problems associated with habitat fragmentation include overall habitat loss, increase in edge habitat and edge effects (particularly higher parasitism and nest predation rates), and...

  18. CADDIS Volume 2. Sources, Stressors and Responses: Physical Habitat - Simple Conceptual Diagram

    EPA Pesticide Factsheets

    Introduction to the Physical Habitat module, when to list Physical Habitat as a candidate cause, ways to measure Physical Habitat, simple and detailed conceptual diagrams for Physical Habitat, Physical Habitat module references and literature reviews.

  19. CADDIS Volume 2. Sources, Stressors and Responses: Physical Habitat - Detailed Conceptual Diagram

    EPA Pesticide Factsheets

    Introduction to the Physical Habitat module, when to list Physical Habitat as a candidate cause, ways to measure Physical Habitat, simple and detailed conceptual diagrams for Physical Habitat, Physical Habitat module references and literature reviews.

  20. Morphodynamics of hard-bottom habitats in the Delaware Bay and the Atlantic inner shelf

    NASA Astrophysics Data System (ADS)

    Raineault, Nicole A.

    Though rare, hard-bottom environments provide oases of biological diversity and abundance on the otherwise fine-grained seafloor of the Delaware Bay and shallow Atlantic shelf. Complex sediment, biological, and hydrodynamic feedbacks shape bottom morphologies. Understanding the mechanisms that form and shape hard-bottom environments is key to better management and protection. The research presented here focuses on characterizing bed morphologies through high-resolution (sub-meter) acoustic mapping and analysis of hydrodynamic data at intertidal, estuarine, and inner shelf environments. Use of phase-measuring bathymetric sonar improved map resolution to <1 m, reduced the need for direct sampling, extended information on sediment-biological relationships to larger areas, and allowed the measurement of bedforms. Results show that hard-bottom habitats in Delaware Bay are more fragmented than previously thought. Acoustic backscatter and ground-truth samples at Broadkill Slough showed meters to 10's of meters variability in sediment and benthic assemblages along and across the major axes of the channel. Annual side-scan surveys at an offshore artificial reef site exhibited signs of periodic morphology. Scour generated during nor'easter events left a lasting imprint on the seabed through the formation of moats that were >0.5 m deep and 10's of meters in horizontal extent on the southwest side of objects. Scour revealed gravelly sand that supported more diverse and abundant macro benthic epifauna. Reef objects settled around 1.3 m into the seabed after six to seven years, suggesting an equilibrium that may be controlled by the underlying geology. The area of seafloor impacted and the time it takes for the seafloor to reach equilibrium was greater for large or clustered objects. By contrast, intertidal and shallow estuarine hard-bottom environments are subjected to daily hydrodynamic forcing that causes the bed to constantly change. A progression from wave orbital ripples

  1. Synergistic effects of habitat preference and gregarious behaviour on habitat use in coral reef cardinalfish

    NASA Astrophysics Data System (ADS)

    Gardiner, N. M.; Jones, G. P.

    2010-12-01

    Spatial distributions of coral reef fish species are potentially determined by habitat preferences and behavioural interactions. However, the relative importance of these factors and whether or not behavioural interactions reinforce or disrupt habitat associations are poorly understood. This paper explores the degree to which habitat and social preferences explain the association that three common coral reef cardinalfish species ( Zoramia leptacanthus, Archamia zosterophora and Cheilodipterus quinquelineatus; family Apogonidae) have with coral substrata at Lizard Island, Great Barrier Reef. At diurnal resting sites, species were strongly associated with branching corals, with 80-90% of each species inhabiting one branching coral species, Porites cylindrica. Species were also highly gregarious, forming large con-specific and hetero-specific aggregations in coral heads, potentially reinforcing habitat associations. Three-way choice experiments were conducted to test fishes habitat preferences for living coral over dead substrata, for particular coral species, and the influence of gregarious behaviour on these habitat choices. The strength of habitat preferences differed among species, with Z. leptacanthus preferring live coral and P. cylindrica, A. zosterophora preferring P. cylindrica, whether live or dead and C. quinquelineatus exhibiting no preferences. All species were attracted to conspecifics, and for C. quinquelineatus and A. zosterophora, conspecific attraction resulted in stronger preferences for live corals. Gregarious behaviour also increased C. quinquelineatus associations with P. cylindrica. The relative strength of social attraction versus habitat preferences was investigated by comparing fish habitat preferences in the presence and/or absence of conspecifics. The presence of conspecifics on non-preferred rubble habitat reduced each species association with live coral. This study’s results indicate that in the field, habitat preferences and

  2. No net loss of fish habitat: a review and analysis of habitat compensation in Canada.

    PubMed

    Harper, D J; Quigley, J T

    2005-09-01

    The achievement of No Net Loss (NNL) through habitat compensation has rarely been assessed in Canada. Files relating to 124 Fisheries Act Section 35(2) authorizations issued by Fisheries and Oceans Canada for the harmful alteration, disruption, and destruction of fish habitat (HADD) were collected and reviewed. Data extracted from these files were pooled and analyzed to provide an indication of the types of HADDs that have been authorized in Canada, what habitats have been affected, and what habitat management approaches have been used when compensating for HADDs and monitoring and ensuring the success of the compensation. Determinations regarding the effectiveness of habitat compensation in achieving NNL were made. Impacts to 419,562 m2 of fish habitat from the 124 authorized HADDs were offset by 1,020,388 m2 of compensatory habitat. Eighty percent of the authorizations had compensation ratios (compensation area:HADD area) of 2:1 or less, and 25% of the authorizations had a compensation ratio that was less than 1:1. In-channel and riparian habitat were the most frequently impacted habitats. Urban development and roads and highways resulted in the greatest areal loss of habitat. The compensation option that was most often selected was the creation of in-kind habitat. The mean duration of post-construction monitoring programs was 3.7 years. Determinations of NNL could only be made for 17 authorizations as a result of poor proponent compliance with monitoring requirements and the qualitative assessment procedures used by the monitoring programs. Adequate resources, proper training, and standardized approaches to data management and monitoring programs are required to ensure that the conservation goal of NNL can be achieved in Canada.

  3. Habitat assessment, Missouri River at Hermann, Missouri

    USGS Publications Warehouse

    Jacobson, Robert B.; Laustrup, Mark S.; Reuter, Joanna M.

    2002-01-01

    This report documents methods and results of aquatic habitat assessment in the Missouri River near Hermann, Missouri. The assessment is intended to improve understanding of spatial and temporal variability of aquatic habitat, including habitats thought to be critical for the endangered pallid sturgeon (Scaphirhynchus albus). Physical aquatic habitat - depth, velocity, and substrate - was assessed around 9 wing dikes and adjacent to the U.S. Route 19 bridge, at discharges varying from 44,000 cubic feet per second (cfs) to 146, 000 cfs during August 2000-May, 2001. For the river as a whole, velocities are bi-modally distributed with distinct peaks relating to navigation channel and wing-dike environments. Velocities predictably showed an increasing trend with increasing discharge. Substrate within wing dikes was dominated by mud at low discharges, whereas the navigation channel had patches of transporting sand, rippled sand, and coarse sand. Discharges that overtopped the wing dikes (about 93,000 cfs, March 2001) were associated with increases of patchy sand, rippled sand, and coarse sand within the wing dikes. When flows were substantially over the wing dikes (146,000 cfs, May 2001) substrates within most wing dikes showed substantial reorganization and coarsening. The habitat assessment provides a geospatial database that can be used to query wing dikes for distributions of depth, velocity, and substrate for comparison with fish samples collected by US Fish and Wildlife Service biologists (Grady and others, 2001). In addition, the assessment documented spatial and temporal variation in habitat within the Hermann reach and over a range of discharges. Measurable geomorphic change--alteration of substrate conditions plus substantial erosion and deposition--was associated with flows equaled or exceeded 12-40% of the time (40-140 days per year). Documented geomorphic change associated with high-frequency flows underscores the natural temporal variability of physical

  4. Influence of habitat degradation on fish replenishment

    NASA Astrophysics Data System (ADS)

    McCormick, M. I.; Moore, J. A. Y.; Munday, P. L.

    2010-09-01

    Temperature-induced coral bleaching is a major threat to the biodiversity of coral reef ecosystems. While reductions in species diversity and abundance of fish communities have been documented following coral bleaching, the mechanisms that underlie these changes are poorly understood. The present study examined the impacts of coral bleaching on the early life-history processes of coral reef fishes. Daily monitoring of fish settlement patterns found that ten times as many fish settled to healthy coral than sub-lethally bleached coral. Species diversity of settling fishes was least on bleached coral and greatest on dead coral, with healthy coral having intermediate levels of diversity. Laboratory experiments using light-trap caught juveniles showed that different damselfish species chose among healthy, bleached and dead coral habitats using different combinations of visual and olfactory cues. The live coral specialist, Pomacentrus moluccensis, preferred live coral and avoided bleached and dead coral, using mostly visual cues to inform their habitat choice. The habitat generalist, Pomacentrus amboinensis, also preferred live coral and avoided bleached and dead coral but selected these habitats using both visual and olfactory cues. Trials with another habitat generalist, Dischistodus sp., suggested that vision played a significant role. A 20 days field experiment that manipulated densities of P. moluccensis on healthy and bleached coral heads found an influence of fish density on juvenile weight and growth, but no significant influence of habitat quality. These results suggests that coral bleaching will affect settlement patterns and species distributions by influencing the visual and olfactory cues that reef fish larvae use to make settlement choices. Furthermore, increased fish density within the remaining healthy coral habitats could play an important role in influencing population dynamics.

  5. Hyperspectral analysis of columbia spotted frog habitat

    USGS Publications Warehouse

    Shive, J.P.; Pilliod, D.S.; Peterson, C.R.

    2010-01-01

    Wildlife managers increasingly are using remotely sensed imagery to improve habitat delineations and sampling strategies. Advances in remote sensing technology, such as hyperspectral imagery, provide more information than previously was available with multispectral sensors. We evaluated accuracy of high-resolution hyperspectral image classifications to identify wetlands and wetland habitat features important for Columbia spotted frogs (Rana luteiventris) and compared the results to multispectral image classification and United States Geological Survey topographic maps. The study area spanned 3 lake basins in the Salmon River Mountains, Idaho, USA. Hyperspectral data were collected with an airborne sensor on 30 June 2002 and on 8 July 2006. A 12-year comprehensive ground survey of the study area for Columbia spotted frog reproduction served as validation for image classifications. Hyperspectral image classification accuracy of wetlands was high, with a producer's accuracy of 96 (44 wetlands) correctly classified with the 2002 data and 89 (41 wetlands) correctly classified with the 2006 data. We applied habitat-based rules to delineate breeding habitat from other wetlands, and successfully predicted 74 (14 wetlands) of known breeding wetlands for the Columbia spotted frog. Emergent sedge microhabitat classification showed promise for directly predicting Columbia spotted frog egg mass locations within a wetland by correctly identifying 72 (23 of 32) of known locations. Our study indicates hyperspectral imagery can be an effective tool for mapping spotted frog breeding habitat in the selected mountain basins. We conclude that this technique has potential for improving site selection for inventory and monitoring programs conducted across similar wetland habitat and can be a useful tool for delineating wildlife habitats. ?? 2010 The Wildlife Society.

  6. Habitat Suitability Index Models: Red-spotted newt

    USGS Publications Warehouse

    Sousa, Patrick J.

    1985-01-01

    A review and synthesis of existing information were used to develop a Habitat Suitability Index (HSI) model for the red-spotted newt (Notophthalmus viridescens viridescens). The model consolidates habitat use information into a framework appropriate for field application, and is scaled to produce an index between 0.0 (unsuitable habitat) to 1.0 (optimum habitat). HSI models are designed to be used with Habitat Evaluation Procedures previously developed by the U.S. Fish and Wildlife Service.

  7. Habitat Suitability Index Models: Plains sharp-tailed grouse

    USGS Publications Warehouse

    Prose, Bart L.

    1987-01-01

    A review and synthesis of existing information were used to develop a Habitat Suitability Index (HSI) model for the plains sharp-tailed grouse (Tympanuchus phasianellus jamesi). The model consolidates habitat use information into a framework appropriate for field application, and is scaled to produce an index between 0.0 (unsuitable habitat) to 1.0 (optimum habitat). HSI models are designed to be used with Habitat Evaluation Procedures previously developed by the U.S. Fish and Wildlife Service.

  8. Habitat Suitability Index Models: Black-shouldered kite

    USGS Publications Warehouse

    Faanes, Craig A.; Howard, Rebecca J.

    1987-01-01

    A review and synthesis of existing information were used to develop a model for evaluating black-shouldered kite habitat quality. The model is scaled to produce an index between 0 (unsuitable habitat) to 1.0 (optimal habitat). Habitat suitability index models are designed for use with the Habitat Evaluation Procedures previously developed by the U.S. Fish and Wildlife Service. Guidelines for model application are provided.

  9. Habitat Suitability Index Models: Moose, Lake Superior Region

    USGS Publications Warehouse

    Allen, Arthur W.; Jordan, Peter A.; Terrell, James W.

    1987-01-01

    A review and synthesis of existing information were used to develop a Habitat Suitability Index (HSI) model for the moose (Alces alces). The model consolidates habitat use information into a framework appropriate for field application, and is scaled to produce an index between 0.0 (unsuitable habitat) to 1.0 (optimum habitat). HSI models are designed to be used with Habitat Evaluation Procedures previously developed by the U.S. Fish and Wildlife Service.

  10. Habitat Suitability Index Models: Blue-winged teal (breeding)

    USGS Publications Warehouse

    Sousa, Patrick J.

    1985-01-01

    A review and synthesis of existing information were used to develop a Habitat Suitability Index (HSI) model for the blue-winged teal (Anas discors). The model consolidates habitat use information into a framework appropriate for field application, and is scaled to produce an index between 0.0 (unsuitable habitat) to 1.0 (optimum habitat). HSI models are designed to be used with Habitat Evaluation Procedures previously developed by the U.S. Fish and Wildlife Service.

  11. Habitat Suitability Index Models: Diamondback terrapin (nesting) - Atlantic coast

    USGS Publications Warehouse

    Palmer, William M.; Cordes, Carroll L.

    1988-01-01

    A review and synthesis of existing information were used to develop a Habitat Suitability Index (HSI) model for the diamondback terrapin (Malaclemys terrapin). The model consolidates habitat use information into a framework appropriate for field application, and is scaled to produce an index between 0.0 (unsuitable habitat) to 1.0 (optimum habitat). HSI models are designed to be used with Habitat Evaluation Procedures previously developed by the U.S. Fish and Wildlife Service.

  12. Habitat Suitability Index Models: Red-winged blackbird

    USGS Publications Warehouse

    Short, Henry L.

    1985-01-01

    A review and synthesis of existing information were used to develop a Habitat Suitability Index (HSI) model for the red-winged blackbird (Agelaius phoeniceus L.). The model consolidates habitat use information into a framework appropriate for field application, and is scaled to produce an index between 0.0 (unsuitable habitat) to 1.0 (optimum habitat). HSI models are designed to be used with Habitat Evaluation Procedures previously developed by the U.S. Fish and Wildlife Service.

  13. Habitat Suitability Index Models: Northern pintail (gulf coast wintering)

    USGS Publications Warehouse

    Howard, Rebecca J.; Kantrud, Harold A.

    1986-01-01

    A review and synthesis of existing information were used to develop a model for evaluating wintering habitat quality for northern pintail (Anas acuta) along the Gulf of Mexico coast. The model is scaled to produce an index between unsuitable habitat) and 1.0 (optimal habitat). Habitat suitability index models are designed for use with the Habitat Evaluation Procedures previously developed by the U.S. Fish and Wildlife Service. Guidelines for model application and techniques for measuring model variables are provided.

  14. Creation of Island Habitat in Jacksonville Harbor, FL

    DTIC Science & Technology

    2013-06-01

    flora will be planted on the islands, natural recruitment is expected based on vegetative growth on similar habitat nearby in the harbor. Among the...not suitable for the littoral zone due to grain size but is ideal for creating wetland habitat, nesting areas for listed and endangered shorebirds... wetlands and mudflats for shorebird habitat, a 1-acre nesting habitat, and 118 acres of upland for songbird habitat as part of Hart-Miller Island. This

  15. Habitat Suitability Index Models: Black-tailed prairie dog

    USGS Publications Warehouse

    Clippinger, Norman W.

    1989-01-01

    A review and synthesis of existing information were used to develop a Habitat Suitability Index (HSI) model for the black-tailed prairie dog (Cynomus ludovicianus). The model consolidates habitat use information into a framework appropriate for field application, and is scaled to produce an index between 0.0 (unsuitable habitat) to 1.0 (optimum habitat). HSI models are designed to be used with Habitat Evaluation Procedures previously developed by the U.S. Fish and Wildlife Service.

  16. Habitat II and the Challenge of the Urban Environment: Bringing Together the Two Definitions of Habitat.

    ERIC Educational Resources Information Center

    Cohen, Michael

    1996-01-01

    Identifies major problems and concerns to be addressed at the upcoming Habitat II conference in Istanbul, Turkey. Details a number of recent significant developments, all of them related to emerging patterns of economic productivity, demographic concentration, and environmental pollution. Proposes a dual-definition of "habitat" as both…

  17. Assessing critical habitat: Evaluating the relative contribution of habitats to population persistence

    EPA Science Inventory

    1. A principal challenge of species conservation is to identify the specific habitats that are essential for long-term persistence or recovery of species at risk. However, many commonly used approaches to identifying important habitats do not provide direct insight into the contr...

  18. Assessing critical habitat: Evaluating the relative contribution of habitats to population

    EPA Science Inventory

    A principal challenge of species conservation is to identify the specific habitats that are essential for long-term persistence or recovery of imperiled species. However, many approaches to identifying important habitats do not provide direct insight into the contribution of hab...

  19. Ord's kangaroo rats living in floodplain habitats: Factors contributing to habitat attraction

    USGS Publications Warehouse

    Miller, M.S.; Wilson, K.R.; Andersen, D.C.

    2003-01-01

    High densities of an aridland granivore, Ord's kangaroo rat (Dipodomys ordii), have been documented in floodplain habitats along the Yampa River in northwestern Colorado. Despite a high probability of inundation and attendant high mortality during the spring flood period, the habitat is consistently recolonized. To understand factors that potentially make riparian habitats attractive to D. ordii, we compared density and spatial pattern of seeds, density of a competitor (western harvester ant, Pogonomyrmex occidentalis), and digging energetics within floodplain habitats and between floodplain and adjacent upland habitats. Seed density within the floodplain was greatest in the topographically high (rarely flooded) floodplain and lowest immediately after a spring flood in the topographically low (frequently flooded) floodplain. Seed densities in adjacent upland habitat that never floods were higher than the lowest floodplain habitat. In the low floodplain prior to flooding, seeds had a clumped spatial pattern, which D. ordii is adept at exploiting; after spring flooding, a more random pattern resulted. Populations of the western harvester ant were low in the floodplain relative to the upland. Digging by D. ordii was energetically less expensive in floodplain areas than in upland areas. Despite the potential for mortality due to annual spring flooding, the combination of less competition from harvester ants and lower energetic costs of digging might promote the use of floodplain habitat by D. ordii.

  20. Assessing critical habitat: Evaluating the relative contribution of habitats to population

    EPA Science Inventory

    A principal challenge of species conservation is to identify the specific habitats that are essential for long-term persistence or recovery of imperiled species. However, many approaches to identifying important habitats do not provide direct insight into the contribution of hab...

  1. Selecting compact habitat reserves for species with differential habitat size needs

    Treesearch

    Vladimir Marianov; Charles ReVelle; Stephanie Snyder

    2008-01-01

    We propose a model for the design of protected habitat reserves, which maximizes the number of species represented at least once in a limited set of reserved sites or parcels. Most models for reserve design do not differentiate eligible habitat sites by their size. Also, they assume that protection is guaranteed through the selection of one site for any species, not...

  2. Habitat connectivity as a metric for aquatic microhabitat quality: Application to Chinook salmon spawning habitat

    Treesearch

    Ryan Carnie; Daniele Tonina; Jim McKean; Daniel Isaak

    2016-01-01

    Quality of fish habitat at the scale of a single fish, at the metre resolution, which we defined here as microhabitat, has been primarily evaluated on short reaches, and their results have been extended through long river segments with methods that do not account for connectivity, a measure of the spatial distribution of habitat patches. However, recent...

  3. Assessing critical habitat: Evaluating the relative contribution of habitats to population persistence

    EPA Science Inventory

    1. A principal challenge of species conservation is to identify the specific habitats that are essential for long-term persistence or recovery of species at risk. However, many commonly used approaches to identifying important habitats do not provide direct insight into the contr...

  4. Desired future condition: Fish habitat in southwestern riparian-stream habitats

    Treesearch

    John N. Rinne

    1996-01-01

    Riparian ecosystems in the southwestern United States provide valuable habitats for many living organisms including native fishes. An analysis of habitat components important to native fishes was made based on the literature, case histories, and unpublished and observational data. Results suggest a natural, surface water hydrograph and lack of introduced species of...

  5. Effects of tide cycles on habitat selection and habitat partitioning by migrating shorebirds

    USGS Publications Warehouse

    Burger, J.; Howe, M.A.; Hahn, D.C.; Chase, J.

    1977-01-01

    We studied assemblages of feeding shorebirds in three intertidal habitats on the coast of New Jersey during August to document how species segregates patially both among and within habitats and to determine the effects of tidal cycles on these patterns. The habitats were a sandy beach facing the ocean proper (outer beach), a sandy beach on the mainland side of a barrier island (inner beach), and a small mudflat adjacent to a Spartina alternifiora salt marsh. We were able to identify several microhabitats on the outer beach and mudflat. Most speciesfe d in more than one habitat, but only two, Charadrius semipalmatus and Calidris canutus, used all three habitats regularly. Within habitats, most species exhibited strong preferences for the wettest areas, but we found differences among species in degrees of preference. The least amount of partitioning occurred on the inner beach, where birds crowded into a small zone near the water's edge and had frequent agonistic encounters suggesting intense competition. Shorebird feeding activity was partly a function of tide time: each habitat had a characteristic temporal pattern of use by shorebirds related to tide time rather than diel time; within habitats, we found species-characteristic feeding activity rhythms that were also a function of tide time. Feeding by most species peaked during the first 2 hours after low tide on the outer beach and mudflat. The results are discussed in terms of feeding strategies and interspecific competition.

  6. Aggregative response in bats: prey abundance versus habitat.

    PubMed

    Müller, Jörg; Mehr, Milenka; Bässler, Claus; Fenton, M Brock; Hothorn, Torsten; Pretzsch, Hans; Klemmt, Hans-Joachim; Brandl, Roland

    2012-07-01

    In habitats where prey is either rare or difficult to predict spatiotemporally, such as open habitats, predators must be adapted to react effectively to variations in prey abundance. Open-habitat foraging bats have a wing morphology adapted for covering long distances, possibly use information transfer to locate patches of high prey abundance, and would therefore be expected to show an aggregative response at these patches. Here, we examined the effects of prey abundance on foraging activities of open-habitat foragers in comparison to that of edge-habitat foragers and closed-habitat foragers. Bat activity was estimated by counting foraging calls recorded with bat call recorders (38,371 calls). Prey abundance was estimated concurrently at each site using light and pitfall traps. The habitat was characterized by terrestrial laser scanning. Prey abundance increased with vegetation density. As expected, recordings of open-habitat foragers clearly decreased with increasing vegetation density. The foraging activity of edge- and closed-habitat foragers was not significantly affected by the vegetation density, i.e., these guilds were able to forage from open habitats to habitats with dense vegetation. Only open-habitat foragers displayed a significant and proportional aggregative response to increasing prey abundance. Our results suggest that adaptations for effective and low-cost foraging constrains habitat use and excludes the guild of open-habitat foragers from foraging in habitats with high prey abundance, such as dense forest stands.

  7. Managing harvest and habitat as integrated components

    USGS Publications Warehouse

    Osnas, Erik; Runge, Michael C.; Mattsson, Brady J.; Austin, Jane E.; Boomer, G. S.; Clark, R. G.; Devers, P.; Eadie, J. M.; Lonsdorf, E. V.; Tavernia, Brian

    2014-01-01

    In 2007, several important initiatives in the North American waterfowl management community called for an integrated approach to habitat and harvest management. The essence of the call for integration is that harvest and habitat management affect the same resources, yet exist as separate endeavours with very different regulatory contexts. A common modelling framework could help these management streams to better understand their mutual effects. Particularly, how does successful habitat management increase harvest potential? Also, how do regional habitat programmes and large-scale harvest strategies affect continental population sizes (a metric used to express habitat goals)? In the ensuing five years, several projects took on different aspects of these challenges. While all of these projects are still on-going, and are not yet sufficiently developed to produce guidance for management decisions, they have been influential in expanding the dialogue and producing some important emerging lessons. The first lesson has been that one of the more difficult aspects of integration is not the integration across decision contexts, but the integration across spatial and temporal scales. Habitat management occurs at local and regional scales. Harvest management decisions are made at a continental scale. How do these actions, taken at different scales, combine to influence waterfowl population dynamics at all scales? The second lesson has been that consideration of the interface of habitat and harvest management can generate important insights into the objectives underlying the decision context. Often the objectives are very complex and trade-off against one another. The third lesson follows from the second – if an understanding of the fundamental objectives is paramount, there is no escaping the need for a better understanding of human dimensions, specifically the desires of hunters and nonhunters and the role they play in conservation. In the end, the compelling question is

  8. Habitat workshops: Knowledge, care and practice

    NASA Astrophysics Data System (ADS)

    Brown, Glenn Russell

    One commonly expressed goal of environmental education (EE) is to create positive attitudes. The dominant approaches emphasize factual information, assuming that attitudes will result, but results are mixed. I investigate conceptions of attitude, the psychology of attitude and how attitudes are learned. I also examine recent scholarship describing learning and teaching, since EE literature does not draw upon many of these ideas. I consider applications of these two perspectives to public schools while working within mainstream (Tbilisi) EE guidelines. It turns out to be important to identify specific, concrete objects and behaviours as targets for attitudes. "Environment" is general and abstract. Strongly related to attitudes, but little discussed, is the self-concept, which influences what one thinks, feels and does. I found that goals about attitudes can be more precisely phrased in terms of care, a positive concern for or interest in an object. I conclude that affective EE goals can be achieved through thoughtful and self-reflective care about local habitats and the species and individuals that inhabit them. Psychologists note that people are better able to manage their knowledge, to transfer ideas to new contexts, and to identify and solve problems if they learn within a group participating in realistic projects. Such interactions also integrate knowledge, skills and attitudes related to the group's work. Building on the Community of Learners model of teaching, I offer a framework for EE curriculum called Habitat Workshops. Its goals are knowledge of, care about and problem solving practices with habitats. Habitat Workshops engage classroom communities in the design and creation of local habitats within a group narrative of care and understanding. They involve both school subject knowledge as well as habitat-specific problems and responses that reflect real-world environmental issues. Habitat Workshops can be simple or progressively more complex. I provide an

  9. Eder Acquisition 2007 Habitat Evaluation Procedures Report.

    SciTech Connect

    Ashley, Paul R.

    2008-01-01

    A habitat evaluation procedures (HEP) analysis was conducted on the Eder acquisition in July 2007 to determine how many protection habitat units to credit Bonneville Power Administration (BPA) for providing funds to acquire the project site as partial mitigation for habitat losses associated with construction of Grand Coulee and Chief Joseph Dams. Baseline HEP surveys generated 3,857.64 habitat units or 1.16 HUs per acre. HEP surveys also served to document general habitat conditions. Survey results indicated that the herbaceous plant community lacked forbs species, which may be due to both livestock grazing and the late timing of the surveys. Moreover, the herbaceous plant community lacked structure based on lower than expected visual obstruction readings (VOR); likely a direct result of livestock impacts. In addition, introduced herbaceous vegetation including cultivated pasture grasses, e.g. crested wheatgrass and/or invader species such as cheatgrass and mustard, were present on most areas surveyed. The shrub element within the shrubsteppe cover type was generally a mosaic of moderate to dense shrubby areas interspersed with open grassland communities while the 'steppe' component was almost entirely devoid of shrubs. Riparian shrub and forest areas were somewhat stressed by livestock. Moreover, shrub and tree communities along the lower reaches of Nine Mile Creek suffered from lack of water due to the previous landowners 'piping' water out of the stream channel.

  10. An index of reservoir habitat impairment

    USGS Publications Warehouse

    Miranda, L.E.; Hunt, K.M.

    2011-01-01

    Fish habitat impairment resulting from natural and anthropogenic watershed and in-lake processes has in many cases reduced the ability of reservoirs to sustain native fish assemblages and fisheries quality. Rehabilitation of impaired reservoirs is hindered by the lack of a method suitable for scoring impairment status. To address this limitation, an index of reservoir habitat impairment (IRHI) was developed by merging 14 metrics descriptive of common impairment sources, with each metric scored from 0 (no impairment) to 5 (high impairment) by fisheries scientists with local knowledge. With a plausible range of 5 to 25, distribution of the IRHI scores ranged from 5 to 23 over 482 randomly selected reservoirs dispersed throughout the USA. The IRHI reflected five impairment factors including siltation, structural habitat, eutrophication, water regime, and aquatic plants. The factors were weakly related to key reservoir characteristics including reservoir area, depth, age, and usetype, suggesting that common reservoir descriptors are poor predictors of fish habitat impairment. The IRHI is rapid and inexpensive to calculate, provides an easily understood measure of the overall habitat impairment, allows comparison of reservoirs and therefore prioritization of restoration activities, and may be used to track restoration progress. The major limitation of the IRHI is its reliance on unstandardized professional judgment rather than standardized empirical measurements. ?? 2010 US Government.

  11. Inflatable rigidizable human habitat of large size

    NASA Astrophysics Data System (ADS)

    Kondyurin, Alexey

    Human organism is sensitive to space environment factors such as temperature variations, ra-diation, microgravity, that exist in all space missions on the board of space ships and space stations on Low Earth Orbit (LEO). The materials and constructions of modern space ships and ISS provide acceptable conditions for human crew during some months on the LEO. Fu-ture space flights to Moon, Mars and further will require new materials and stronger protection against high intensity solar irradiation, which could kill living organisms when flight is over the radiation belt of Earth. One of the modern project for future space flight is a large size habitat based on inflatable technology with rigidization of the habitat walls after deployment. The requirements for radiation protection, stable inflating, rigidization and sufficient mechan-ical properties during long life-time of the habitat are key question for selection of a suitable materials of the habitat. The properties of the inflatable rigidizable habitat to save life in far space are considered and discussed.

  12. Genetic differentiation within and between two habitats.

    PubMed Central

    Rousset, F

    1999-01-01

    We investigate the usefulness of analyses of population differentiation between different ecological types, such as host races of parasites or sources and sink habitats. To that aim, we formulate a model of population structure involving two classes of subpopulations found in sympatry. Extensions of previous results for Wright's F-statistics in island and isolation-by-distance models of dispersal are given. It is then shown that source and sinks cannot in general be distinguished by F-statistics nor by their gene diversities. The excess differentiation between two partially isolated classes with respect to differentiation within classes is shown to decrease with distance, and for a wide range of parameter values it should be difficult to detect. In the same circumstances little differentiation will be observed in "hierarchical" analyses between pools of samples from each habitat, and differences between levels of differentiation within each habitat will only reflect differences between levels of gene diversity within each habitat. Exceptions will indicate strong isolation between the different classes or habitat-related divergent selection. PMID:9872976

  13. A review of approaches for classifying benthic habitats and evaluating habitat quality.

    PubMed

    Diaz, Robert J; Solan, Martin; Valente, Raymond M

    2004-11-01

    We have assessed the current state of knowledge relative to methods used in assessing sub-tidal benthic habitat quality and the classification of benthic habitats. While our main focus is on marine habitat, we extensively draw on knowledge gained in freshwater systems where benthic assessment procedures are at an advanced stage of maturity. We found a broad range of sophistication/complication in terms of the methods applied in assessing and mapping benthic habitats. The simplest index or metric involved some assessment of species richness, while the most complicated required utilizing multi-variate analysis. The simplest mapping attempts equated physical substrate with benthic habitat while the most sophisticated relied on extensive environmental preference and groundtruth data for species of concern. The leading edge of methods for benthic habitat mapping involves combining the advances in optical and acoustic methods that allow for routine classifying and mapping of the seafloor with biological and habitat data for species of concern. The objective of this melding of dispirit methods is to produce benthic habitat maps with broad system wide coverage and sound biological underpinning. It is clear that the disparity in information density between the physical and biological sides of the equation currently hinder applicability and acceptability of benthic habitat mapping efforts. In addition to the lack of basic information on the biological and environmental tolerances of targeted species, the proliferation of metrics for characterizing and assessing biological conditions further clouds the usefulness of any broad scale mapping attempt. The problem of data density mismatch between physical and biological methods will likely not be solved until acoustic methods can routinely resolve the elusive biological components that make a physical substrate a habitat.

  14. Habitat specialization through germination cueing: a comparative study of herbs from forests and open habitats.

    PubMed

    Ten Brink, Dirk-Jan; Hendriksma, Harmen Pieter; Bruun, Hans Henrik

    2013-02-01

    This study examined the adaptive association between seed germination ecology and specialization to either forest or open habitats across a range of evolutionary lineages of seed plants, in order to test the hypotheses that (1) species' specialization to open vs. shaded habitats is consistently accompanied by specialization in their regeneration niche; and (2) species are thereby adapted to utilize different windows of opportunity in time (season) and space (habitat). Seed germination response to temperature, light and stratification was tested for 17 congeneric pairs, each consisting of one forest species and one open-habitat species. A factorial design was used with temperature levels and diurnal temperature variation (10 °C constant, 15-5 °C fluctuating, 20 °C constant, 25-15 °C fluctuating), and two light levels (light and darkness) and a cold stratification treatment. The congeneric species pair design took phylogenetic dependence into account. Species from open habitats germinated better at high temperatures, whereas forest species performed equally well at low and high temperatures. Forest species tended to germinate only after a period of cold stratification that could break dormancy, while species from open habitats generally germinated without cold stratification. The empirically derived germination strategies correspond quite well with establishment opportunities for forest and open-habitat plant species in nature. Annual changes in temperature and light regime in temperate forest delimit windows of opportunity for germination and establishment. Germination strategies of forest plants are adaptations to utilize such narrow windows in time. Conversely, lack of fit between germination ecology and environment may explain why species of open habitats generally fail to establish in forests. Germination strategy should be considered an important mechanism for habitat specialization in temperate herbs to forest habitats. The findings strongly suggest that

  15. Habitat specialization through germination cueing: a comparative study of herbs from forests and open habitats

    PubMed Central

    ten Brink, Dirk-Jan; Hendriksma, Harmen Pieter; Bruun, Hans Henrik

    2013-01-01

    Background and Aims This study examined the adaptive association between seed germination ecology and specialization to either forest or open habitats across a range of evolutionary lineages of seed plants, in order to test the hypotheses that (1) species' specialization to open vs. shaded habitats is consistently accompanied by specialization in their regeneration niche; and (2) species are thereby adapted to utilize different windows of opportunity in time (season) and space (habitat). Methods Seed germination response to temperature, light and stratification was tested for 17 congeneric pairs, each consisting of one forest species and one open-habitat species. A factorial design was used with temperature levels and diurnal temperature variation (10 °C constant, 15–5 °C fluctuating, 20 °C constant, 25–15 °C fluctuating), and two light levels (light and darkness) and a cold stratification treatment. The congeneric species pair design took phylogenetic dependence into account. Key Results Species from open habitats germinated better at high temperatures, whereas forest species performed equally well at low and high temperatures. Forest species tended to germinate only after a period of cold stratification that could break dormancy, while species from open habitats generally germinated without cold stratification. The empirically derived germination strategies correspond quite well with establishment opportunities for forest and open-habitat plant species in nature. Conclusions Annual changes in temperature and light regime in temperate forest delimit windows of opportunity for germination and establishment. Germination strategies of forest plants are adaptations to utilize such narrow windows in time. Conversely, lack of fit between germination ecology and environment may explain why species of open habitats generally fail to establish in forests. Germination strategy should be considered an important mechanism for habitat specialization in temperate herbs

  16. Habitat selection by postbreeding female diving ducks: Influence of habitat attributes and conspecifics

    USGS Publications Warehouse

    Austin, Jane E.; O'Neil, Shawn T.; Warren, Jeffrey M.

    2017-01-01

    Habitat selection studies of postbreeding waterfowl have rarely focused on within-wetland attributes such as water depth, escape cover, and food availability. Flightless waterfowl must balance habitat selection between avoiding predation risks and feeding. Reproductively successful female ducks face the greatest challenges because they begin the definitive prebasic molt at or near the end of brood rearing, when their body condition is at a low point. We assessed the relative importance of habitat attributes and group effects in habitat selection by postbreeding female lesser scaup Aythya affinis on a 2332-ha montane wetland complex during the peak flightless period (August) over seven years. Hypothesis-based habitat attributes included percent open water, open water:emergent edge density, water depth, percent flooded bare substrate, fetch (distance wind can travel unobstructed), group size, and several interactions representing functional responses to interannual variation in water levels. Surveys of uniquely marked females were conducted within randomly ordered survey blocks. We fitted two-part generalized linear mixed-effects models to counts of marked females within survey blocks, which allowed us to relate habitat attributes to relative probability of occurrence and, given the presence of a marked female, abundance of marked individuals. Postbreeding female scaup selected areas with water depths > 40 cm, large open areas, and intermediate edge densities but showed no relation to flooded bare substrate, suggesting their habitat preferences were more influenced by avoiding predation risks and disturbances than in meeting foraging needs. Grouping behavior by postbreeding scaup suggests habitat selection is influenced in part by behavioral components and/or social information, conferring energetic and survival benefits (predation and disturbance risks) but potentially also contributing to competition for food resources. This study demonstrates the importance of

  17. Benthic macrofauna habitat associations in Willapa Bay, Washington, USA

    NASA Astrophysics Data System (ADS)

    Ferraro, Steven P.; Cole, Faith A.

    2007-02-01

    Estuary-wide benthic macrofauna-habitat associations in Willapa Bay, Washington, United States, were determined for 4 habitats (eelgrass [ Zostera marina], Atlantic cordgrass [ Spartina alterniflora], mud shrimp [ Upogebia pugettensis], ghost shrimp [ Neotrypaea californiensis]) in 1996 and 7 habitats (eelgrass, Atlantic cordgrass, mud shrimp, ghost shrimp, oyster [ Crassostrea gigas], bare mud/sand, subtidal) in 1998. Most benthic macrofaunal species inhabited multiple habitats; however, 2 dominants, a fanworm, Manayunkia aestuarina, in Spartina, and a sand dollar, Dendraster excentricus, in subtidal, were rare or absent in all other habitats. Benthic macrofaunal Bray-Curtis similarity varied among all habitats except eelgrass and oyster. There were significant differences among habitats within- and between-years on several of the following ecological indicators: mean number of species ( S), abundance ( A), biomass ( B), abundance of deposit (AD), suspension (AS), and facultative (AF) feeders, Swartz's index (SI), Brillouin's index ( H), and jackknife estimates of habitat species richness (HSR). In the 4 habitats sampled in both years, A was about 2.5× greater in 1996 (a La Niña year) than 1998 (a strong El Niño year) yet relative values of S, A, B, AD, AS, SI, and H among the habitats were not significantly different, indicating strong benthic macrofauna-habitat associations despite considerable climatic and environmental variability. In general, the rank order of habitats on indicators associated with high diversity and productivity (high S, A, B, SI, H, HSR) was eelgrass = oyster ≥ Atlantic cordgrass ≥ mud shrimp ≥ bare mud/sand ≥ ghost shrimp = subtidal. Vegetation, burrowing shrimp, and oyster density and sediment %silt + clay and %total organic carbon were generally poor, temporally inconsistent predictors of ecological indicator variability within habitats. The benthic macrofauna-habitat associations in this study can be used to help identify

  18. Crims Island-Restoration and monitoring of juvenile salmon rearing habitat in the Columbia River Estuary, Oregon, 2004-10

    USGS Publications Warehouse

    Haskell, Craig A.; Tiffan, Kenneth F.

    2011-01-01

    -channel' was extended westward and connected to Bradbury Slough to create a second outlet to the main river. New intertidal channels were constructed from the existing 'T-channel' and tidal mudflats became inundated at high tide to increase rearing habitat for juvenile salmonids. The restoration action resulted in a 95-percent increase in available juvenile salmon rearing habitat. We collected juvenile salmon and other fishes at Crims Island and a nearby reference site using beach seines and fyke nets annually from March through August during all years. Benthic invertebrates were collected with sediment corers and drift invertebrates were collected with neuston nets. Juvenile salmon stomach contents were sampled using lavage. Vegetation and sediments characteristics were surveyed and we conducted a topographic/bathymetric survey using a RTK (real time kinematic) GPS (global positioning system). The fish assemblage at Crims Island, composed primarily of threespine stickleback (Gasterosteus aculeatus), non-native banded killifish (Fundulus diaphanus), peamouth chub (Mylocheilus caurinus), subyearling Chinook salmon (Oncorhynchus tshawytscha) (hereinafter referred to as subyearlings), and small numbers of juvenile chum salmon (Oncorhynchus keta), did not differ appreciably pre- and post-restoration. Subyearlings were the primary salmonid collected and were seasonally abundant from April through May during all years. The abundance of juvenile salmon declined seasonally as water temperature exceeded 20 degrees C in the Reference site by mid-June; however, subyearlings persisted at the Mainstem site and in subtidal channels of the Restoration site through the summer in water temperatures exceeding 22 degrees C. Residence times of subyearlings in Crims Island backwaters generally were short consisting of one or two tidal cycles. Median residence time was longer in the Restoration site than in the Reference site pre- and post-restoration. Small (mean = 55.7 millimeters) subyea

  19. Landscape habitat diversity: An information theoretic measure

    SciTech Connect

    Loehle, C.; Wein, G.

    1994-06-01

    Biotic diversity is a topic of increasing concern, but current tools for quantifying diversity at the landscape level are inadequate. A new index is proposed. Beginning with a classified raster image of a landscape, each habitat type is assigned a value based on an ordination axis distance. The change in value from one patch to the next depends on how similar the two patches are. An information measure d{sub I} is used to evaluate deviation from uniformity of the ordination values at different scales. Different areas can be compared if habitat values are based on the same ordination scale. This new method provides a powerful tool for both displaying and calculating landscape habitat diversity.

  20. Habitat fragmentation effects on biodiversity patterns

    NASA Astrophysics Data System (ADS)

    Conceição, Katiane S.; de Oliveira, Viviane M.

    2010-09-01

    We study the effects of habitat fragmentation on biodiversity patterns by means of a simple spatial model which considers selective geographic colonization, diffusion and mutation. In our model, regions of the lattice are characterized by the amount of resources available to populations of species which are going to colonize that regions. We simulate the fragmentation of the habitat by assuming that a proportion p of the sites is not available for colonization, that is, there is no resource availability in those sites. We analyse the patterns of the species-area relationship and the abundance distribution considering two sample methods, in order to simulate the cases in which the habitats are distributed in islands and continents. We have observed that the pattern of the species-area curve is changed when different sample methods are considered. We have also verified that the abundance distribution is bimodal when small mutation probabilities are considered.