Complex Structures in Sediments Overlying Sinkholes: 3D-GPR and Azimuthal Resistivity Imaging

NASA Astrophysics Data System (ADS)

Kruse, S.; Kiflu, H. G.; Ammar, A. I., Sr.; Karashay, P., III; Marshall, A. M.; McNiff, C. M.

2014-12-01

3D GPR surveys in the covered karst terrain of west-central Florida, USA, reveal surprising geometries of surficial sediments. Several meters of surficial sands overlie progressively more clay-rich sediments, which in turn overlie weathered limestone. The top of a clay-rich horizon produces an exceptionally clear GPR reflector visible from depths between 0.5 and ~8 meters. On length scales of 10-20 meters, the geometry of this horizon as it drapes over underlying weathered limestone suggests that depressions are not conical, but instead more complex troughs that surround domed stratigraphic highs. Azimuthal semi-variograms of the clay horizon depth show greatest correlation in directions that are aligned with the direction of elevated resistivities at depths to 10-14 meters. One possible interpretation is that dissolution in underlying limestone is concentrated in elongated zones rather than in columnar or spherical voids. Elongated sand-filled depressions in the clay layer produce azimuthal resistivity highs in the direction of the elongation. This direction in turn corresponds to the major axis of depressions in the clay-rich GPR reflecting horizon. Groundwater recharge in this area is concentrated into conduits that breach the clay-rich units that overlie the limestone aquifer. This study suggests that the conduits themselves may be elongated features rather than cylindrical in form. Recharge flow paths may be more complex than previously recognized. The high-resolution GPR images require 3D surveys with 250 MHz and 500 MHz antennas, with 10-cm line spacings, careful corrections for antenna positions and 3D migrations of the data.

Gravity perception and asymmetric growth in plants - A model derived from the grass pulvinus

NASA Technical Reports Server (NTRS)

Dayanandan, P.; Franklin, C. I.; Kaufman, P. B.

1982-01-01

It is pointed out that gravitropic responses in plants involve asymmetric growth. On the basis of the geometry of growth response in grass leaf sheath pulvinus, a general model is proposed for gravitropism in multicellular plant organs. The negative gravitropic response of a pulvinus is a result of cell elongation involving all but the uppermost region of a horizontally placed organ. Whereas the uppermost region does not grow, the lowermost region elongates maximally. The regions between elongate to intermediate extents. An expression is given relating the angle of curvature of the organ to the diameter and initial and final lengths of the organ. It is shown that the response of the individual cells can be expressed as inherent sensitivity to gravitational stimulus according to a particular equation.

The temporal distribution of seismic radiation during deep earthquake rupture

USGS Publications Warehouse

Houston, H.; Vidale, J.E.

1994-01-01

The time history of energy release during earthquakes illuminates the process of failure, which remains enigmatic for events deeper than about 100 kilometers. Stacks of teleseismic records from regional arrays for 122 intermediate (depths of 100 to 350 kilometers) and deep (depths of 350 to 700 kilometers) earthquakes show that the temporal pattern of short-period seismic radiation has a systematic variation with depth. On average, for intermediate depth events more radiation is released toward the beginning of the rupture than near the end, whereas for deep events radiation is released symmetrically over the duration of the event, with an abrupt beginning and end of rupture. These findings suggest a variation in the style of rupture related to decreasing fault heterogeneity with depth.The time history of energy release during earthquakes illuminates the process of failure, which remains enigmatic for events deeper than about 100 kilometers. Stacks of teleseismic records from regional arrays for 122 intermediate (depths of 100 to 350 kilometers) and deep (depths of 350 to 700 kilometers) earthquakes show that the temporal pattern of short-period seismic radiation has a systematic variation with depth. On average, for intermediate depth events more radiation is released toward the beginning of the rupture than near the end, whereas for deep events radiation is released symmetrically over the duration of the event, with an abrupt beginning and end of rupture. These findings suggest a variation in the style of rupture related to decreasing fault heterogeneity with depth.

Solid oxide fuel cell generator

DOEpatents

Draper, Robert; George, Raymond A.; Shockling, Larry A.

1993-01-01

A solid oxide fuel cell generator has a pair of spaced apart tubesheets in a housing. At least two intermediate barrier walls are between the tubesheets and define a generator chamber between two intermediate buffer chambers. An array of fuel cells have tubes with open ends engaging the tubesheets. Tubular, axially elongated electrochemical cells are supported on the tubes in the generator chamber. Fuel gas and oxidant gas are preheated in the intermediate chambers by the gases flowing on the other side of the tubes. Gas leakage around the tubes through the tubesheets is permitted. The buffer chambers reentrain the leaked fuel gas for reintroduction to the generator chamber.

Reversal bending fatigue testing

DOEpatents

Wang, Jy-An John; Wang, Hong; Tan, Ting

2014-10-21

Embodiments for apparatuses for testing reversal bending fatigue in an elongated beam are disclosed. Embodiments are configured to be coupled to first and second end portions of the beam and to apply a bending moment to the beam and create a pure bending condition in an intermediate portion of the beam. Embodiments are further configured to cyclically alternate the direction of the bending moment applied to the beam such that the intermediate portion of the beam cyclically bends in opposite directions in a pure bending condition.

Recent Intermediate Depth Earthquakes in El Salvador, Central Mexico, Cascadia and South-West Japan

NASA Astrophysics Data System (ADS)

Lemoine, A.; Gardi, A.; Gutscher, M.; Madariaga, R.

2001-12-01

We studied occurence and source parameters of several recent intermediate depth earthquakes. We concentrated on the Mw=7.7 salvadorian earthquake which took place on January 13, 2001. It was a good example of the high seismic risk associated to such kind of events which occur closer to the coast than the interplate thrust events. The Salvadorian earthquake was an intermediate depth downdip extensional event which occured inside the downgoing Cocos plate, next to the downdip flexure where the dip increases sharply before the slab sinks more steeply. This location corresponds closely to the position of the Mw=5.7 1996 and Mw=7.3 1982 downdip extensional events. Several recent intermediate depth earthquakes occured in subduction zones exhibiting a ``flat slab'' geometry with three distinct flexural bends where flexural stress may be enhanced. The Mw=6.7 Geiyo event showed a downdip extensional mechanism with N-S striking nodal planes. This trend was highly oblique to the trench (Nankai Trough), yet consistent with westward steepening at the SW lateral termination of the SW Japan flat slab. The Mw=6.8 Olympia earthquake in the Cascadia subduction zone occured at the downdip termination of the Juan de Fuca slab, where plate dip increases from about 5o to over 30o. The N-S orientation of the focal planes, parallel to the trench indicated downdip extension. The location at the downdip flexure corresponds closely to the estimated positions of the 1949 M7.1 Olympia and 1965 M6.5 Seattle-Tacoma events. Between 1994 and 1999, in Central Mexico, an unusually high intermediate depth seismicity occured where several authors proposed a flat geometry for the Cocos plate. Seven events of magnitude between Mw=5.9 and Mw=7.1 occured. Three of them were downdip compressional and four where down-dip extensional. We can explain these earthquakes by flexural stresses at down-dip and lateral terminations of the supposed flat segment. Even if intermediate depth earthquakes occurence could be favored by stress transfer between intermediate depth and interplate zone during the earthquake cycle, flexural stresses associated with bendings which are not only present at ``flat slab'' geometry but also at ``normal'' dipping subduction zone, seem to govern the location of intermediate depth seismicity and to explain their focal mechanisms in El Salvador, SW Japon, Cascadia and Central Mexico.

Synthesis of Elongated Microcapsules

NASA Technical Reports Server (NTRS)

Li, Wenyan; Buhrow, Jerry; Calle, Luz M.

2011-01-01

One of the factors that influence the effectiveness of self-healing in functional materials is the amount of liquid healing agents that can be delivered to the damaged area. The use of hollow tubes or fibers and the more sophisticated micro-vascular networks has been proposed as a way to increase the amount of healing agents that can be released when damage is inflicted. Although these systems might be effective in some specific applications, they are not practical for coatings applications. One possible practical way to increase the healing efficiency is to use microcapsules with high-aspect-ratios, or elongated microcapsules. It is understood that elongated microcapsules will be more efficient because they can release more healing agent than a spherical microcapsule when a crack is initiated in the coating. Although the potential advantage of using elongated microcapsules for self healing applications is clear, it is very difficult to make elongated microcapsules from an emulsion system because spherical microcapsules are normally formed due to the interfacial tension between the dispersed phase and the continuous phase. This paper describes the two methods that have been developed by the authors to synthesize elongated microcapsules. The first method involves the use of an emulsion with intermediate stability and the second involves the application of mechanical shear conditions to the emulsion.

METHOD OF FORMING ELONGATED COMPACTS

DOEpatents

Larson, H.F.

1959-05-01

A powder compacting procedure and apparatus which produces elongated compacts of Be is described. The powdered metal is placed in a thin metal tube which is chemically compatible to lubricant, powder, atmosphere, and die material and will undergo a high degree of plastic deformation and have intermediate hardness. The tube is capped and placed in the die, and punches are applied to the ends. During the compacting stroke the powder seizes the tube and a thickening and shortening of the tube occurs. The tube is easily removed from the die, split, and peeled from the compact. (T.R.H.)

The structural changes of T7 RNA polymerase from transcription initiation to elongation

PubMed Central

Steitz, Thomas A

2010-01-01

Summary The structures of T7 RNA polymerase (T7 RNAP) captured in the initiation and elongation phases of transcription, as well as an intermediate stage provide insights into how this RNA polymerase protein can initiate RNA synthesis and synthesize 7 to 10 nucleotides of RNA while remaining bound to the DNA promoter site. Recently, the structures of T7 RNAP bound to it promoter DNA along with either a 7 nucleotide or 8 nucleotide transcript show an elongated product site resulting from a 40° or 45° rotation of the promoter and domain that binds it. The different functional properties of the initiation and elongation phases of transcription are illuminated from structures of the initiation and elongation complexes. Structural insights into the translocation of the product transcript of RNAP, its separation of the downstream duplex DNA and its removal of the transcript from the heteroduplex are provided by the structures of several states of nucleotide incorporation. A conformational change in the “fingers” domain that results from the binding or dissociation of incoming NTP or PPi appears to be associated with the state of translocation of T7 RNAP. PMID:19811903

Seismic imaging of slab metamorphism and genesis of intermediate-depth intraslab earthquakes

NASA Astrophysics Data System (ADS)

Hasegawa, Akira; Nakajima, Junichi

2017-12-01

We review studies of intermediate-depth seismicity and seismic imaging of the interior of subducting slabs in relation to slab metamorphism and their implications for the genesis of intermediate-depth earthquakes. Intermediate-depth events form a double seismic zone in the depth range of c. 40-180 km, which occur only at locations where hydrous minerals are present, and are particularly concentrated along dehydration reaction boundaries. Recent studies have revealed detailed spatial distributions of these events and a close relationship with slab metamorphism. Pressure-temperature paths of the crust for cold slabs encounter facies boundaries with large H2O production rates and positive total volume change, which are expected to cause highly active seismicity near the facies boundaries. A belt of upper-plane seismicity in the crust nearly parallel to 80-90 km depth contours of the slab surface has been detected in the cold Pacific slab beneath eastern Japan, and is probably caused by slab crust dehydration with a large H2O production rate. A seismic low-velocity layer in the slab crust persists down to the depth of this upper-plane seismic belt, which provides evidence for phase transformation of dehydration at this depth. Similar low-velocity subducting crust closely related with intraslab seismicity has been detected in several other subduction zones. Seismic tomography studies in NE Japan and northern Chile also revealed the presence of a P-wave low-velocity layer along the lower plane of a double seismic zone. However, in contrast to predictions based on the serpentinized mantle, S-wave velocity along this layer is not low. Seismic anisotropy and pore aspect ratio may play a role in generating this unique structure. Although further validation is required, observations of these distinct low P-wave velocities along the lower seismic plane suggest the presence of hydrated rocks or fluids within that layer. These observations support the hypothesis that dehydration-derived H2O causes intermediate-depth intraslab earthquakes. However, it is possible that dual mechanisms generate these earthquakes; the initiation of earthquake rupture may be caused by local excess pore pressure from H2O, and subsequent ruptures may propagate through thermal shear instability. In either case, slab-derived H2O plays an important role in generating intermediate-depth events.

Acoustic Panel Liner for an Engine Nacelle

NASA Technical Reports Server (NTRS)

Nark, Douglas M. (Inventor); Ayle, Earl (Inventor); Jones, Michael G. (Inventor); Ichihashi, Fumitaka (Inventor)

2016-01-01

An acoustic panel liner includes a face sheet, back plate, and liner core positioned there-between, which may be used in an engine nacelle. Elongated chambers contain variable amounts of septa at a calibrated depth or depths. The septa may have varying DC flow resistance. The chambers may have a hexagonal or other polygonal cross sections. The septa, such as mesh caps, may be bonded to an inner wall of a corresponding chamber. The insertion depths may be the same or different. If different, the pattern of distribution of the depths may be randomized.

Imaging the 2017 MW 8.2 Tehuantepec intermediate-depth earthquake using Teleseismic P Waves

NASA Astrophysics Data System (ADS)

Brudzinski, M.; Zhang, H.; Koper, K. D.; Pankow, K. L.

2017-12-01

The September 8, 2017 MW 8.1 Tehuantepec, Mexico earthquakes in the middle American subduction zone is one of the largest intermediate-depth earthquake ever recorded and could provide an unprecedented opportunity for understanding the mechanism of intermediate-depth earthquakes. While the hypocenter and centroid depths for this earthquake are shallower than typically considered for intermediate depth earthquakes, the normal faulting mechanism consistent with down-dip extension and location within the subducting plate align with properties of intermediate depth earthquakes. Back-projection of high-frequency teleseismic P-waves from two regional arrays for this earthquake shows unilateral rupture on a southeast-northwest striking fault that extends north of the Tehuantepec fracture zone (TFZ), with an average horizontal rupture speed of 3.0 km/s and total duration of 60 s. Guided by these back-projection results, 47 globally distributed low-frequency P-waves were inverted for a finite-fault model (FFM) of slip for both nodal planes. The FFM shows a slip deficit in proximity to the extension of the TFZ, as well as the minor rupture beyond the TFZ (confirmed by the synthetic tests), which indicates that the TFZ acted as a barrier for this earthquake. Analysis of waveform misfit leads to the preference of a subvertical plane as the causative fault. The FFM shows that the majority of the rupture is above the focal depth and consists of two large slip patches: the first one is near the hypocenter ( 55 km depth) and the second larger one near 30 km depth. The distribution of the two patches spatially agrees with seismicity that defines the upper and lower zones of a double Benioff zone (DBZ). It appears there was single fault rupture across the two depth zones of the DBZ. This is uncommon because a stark aseismic zone is typically observed between the upper and lower zones of the DBZ. This finding indicates that the mechanism for intraslab earthquakes must allow for rupture to propagate from one of the DBZ to the other despite seismic quiescence in between, suggesting the aseismic zone is conditionally stable: unable to nucleate earthquakes but able to host a large rupture going across.

Ardnamurchan 3D cone-sheet architecture explained by a single elongate magma chamber

PubMed Central

Burchardt, Steffi; Troll, Valentin R.; Mathieu, Lucie; Emeleus, Henry C.; Donaldson, Colin H.

2013-01-01

The Palaeogene Ardnamurchan central igneous complex, NW Scotland, was a defining place for the development of the classic concepts of cone-sheet and ring-dyke emplacement and has thus fundamentally influenced our thinking on subvolcanic structures. We have used the available structural information on Ardnamurchan to project the underlying three-dimensional (3D) cone-sheet structure. Here we show that a single elongate magma chamber likely acted as the source of the cone-sheet swarm(s) instead of the traditionally accepted model of three successive centres. This proposal is supported by the ridge-like morphology of the Ardnamurchan volcano and is consistent with the depth and elongation of the gravity anomaly underlying the peninsula. Our model challenges the traditional model of cone-sheet emplacement at Ardnamurchan that involves successive but independent centres in favour of a more dynamical one that involves a single, but elongate and progressively evolving magma chamber system. PMID:24100542

Ardnamurchan 3D cone-sheet architecture explained by a single elongate magma chamber.

PubMed

Burchardt, Steffi; Troll, Valentin R; Mathieu, Lucie; Emeleus, Henry C; Donaldson, Colin H

2013-10-08

The Palaeogene Ardnamurchan central igneous complex, NW Scotland, was a defining place for the development of the classic concepts of cone-sheet and ring-dyke emplacement and has thus fundamentally influenced our thinking on subvolcanic structures. We have used the available structural information on Ardnamurchan to project the underlying three-dimensional (3D) cone-sheet structure. Here we show that a single elongate magma chamber likely acted as the source of the cone-sheet swarm(s) instead of the traditionally accepted model of three successive centres. This proposal is supported by the ridge-like morphology of the Ardnamurchan volcano and is consistent with the depth and elongation of the gravity anomaly underlying the peninsula. Our model challenges the traditional model of cone-sheet emplacement at Ardnamurchan that involves successive but independent centres in favour of a more dynamical one that involves a single, but elongate and progressively evolving magma chamber system.

Continental lithospheric subduction and intermediate-depth seismicity: Constraints from S-wave velocity structures in the Pamir and Hindu Kush

NASA Astrophysics Data System (ADS)

Li, Wei; Chen, Yun; Yuan, Xiaohui; Schurr, Bernd; Mechie, James; Oimahmadov, Ilhomjon; Fu, Bihong

2018-01-01

The Pamir has experienced more intense deformation and shortening than Tibet, although it has a similar history of terrane accretion. Subduction as a primary way to accommodate lithospheric shortening beneath the Pamir has induced the intermediate-depth seismicity, which is rare in Tibet. Here we construct a 3D S-wave velocity model of the lithosphere beneath the Pamir by surface wave tomography using data of the TIPAGE (Tien Shan-Pamir Geodynamic program) and other seismic networks in the area. We imaged a large-scale low velocity anomaly in the crust at 20-50 km depth in the Pamir overlain by a high velocity anomaly at a depth shallower than 15 km. The high velocity anomalies colocate with exposed gneiss domes, which may imply a similar history of crustal deformation, partial melting and exhumation in the hinterland, as has occurred in the Himalaya/Tibet system. At mantle depths, where the intermediate-depth earthquakes are located, a low velocity zone is clearly observed extending to about 180 km and 150 km depth in the Hindu Kush and eastern Pamir, respectively. Moreover, the geometry of the low-velocity anomaly suggests that lower crustal material has been pulled down into the mantle by the subducting Asian and Indian lithospheric mantle beneath the Pamir and Hindu Kush, respectively. Metamorphic processes in the subducting lower crust may cause the intermediate-depth seismicity down to 150-180 km depth beneath the Pamir and Hindu Kush. We inverted focal mechanisms in the seismic zone for the stress field. Differences in the stress field between the upper and lower parts of the Indian slab imply that subduction and detachment of the Indian lithosphere might cause intense seismicity associated with the thermal shear instability in the deep Hindu Kush.

Reduced oxygenation at intermediate depths of the southwest Pacific during the last glacial maximum

NASA Astrophysics Data System (ADS)

Durand, Axel; Chase, Zanna; Noble, Taryn L.; Bostock, Helen; Jaccard, Samuel L.; Townsend, Ashley T.; Bindoff, Nathaniel L.; Neil, Helen; Jacobsen, Geraldine

2018-06-01

To investigate changes in oxygenation at intermediate depths in the southwest Pacific between the Last Glacial Maximum (LGM) and the Holocene, redox sensitive elements uranium and rhenium were measured in 12 sediment cores located on the Campbell and Challenger plateaux offshore from New Zealand. The core sites are currently bathed by Subantarctic Mode Water (SAMW), Antarctic Intermediate Water (AAIW) and Upper Circumpolar Deep Water (UCDW). The sedimentary distributions of authigenic uranium and rhenium reveal reduced oxygen content at intermediate depths (800-1500 m) during the LGM compared to the Holocene. In contrast, data from deeper waters (≥1500 m) indicate higher oxygen content during the LGM compared to the Holocene. These data, together with variations in benthic foraminiferal δ13C, are consistent with a shallower AAIW-UCDW boundary over the Campbell Plateau during the LGM. Whilst AAIW continued to bathe the intermediate depths (≤1500 m) of the Challenger Plateau during the LGM, the data suggest that the AAIW at these core sites contained less oxygen compared to the Holocene. These results are at odds with the general notion that AAIW was better oxygenated and expanded deeper during the LGM due to stronger westerlies and colder temperatures. These findings may be explained by an important change in AAIW formation and circulation.

Effect of orientation on the morphology and mechanical properties of PLA/starch composite filaments

USDA-ARS?s Scientific Manuscript database

PLA/starch fibers were produced by twin screw extrusion of PLA with granular or gelatinized starch/glycerol followed by drawing through a set of winders with an intermediate oven. At 30% starch, fibers drawn 2-5x were highly flexible (elongation 20-100%) while undrawn filaments were brittle (elonga...

A glycosyltransferase with a length-controlling activity as a mechanism to regulate the size of polysaccharides

PubMed Central

Ciocchini, Andrés E.; Guidolin, L. Soledad; Casabuono, Adriana C.; Couto, Alicia S.; Iñón de Iannino, Nora; Ugalde, Rodolfo A.

2007-01-01

Cyclic β-1,2-glucans (CβG) are osmolyte homopolysaccharides with a cyclic β-1,2-backbone of 17–25 glucose residues present in the periplasmic space of several bacteria. Initiation, elongation, and cyclization, the three distinctive reactions required for building the cyclic structure, are catalyzed by the same protein, the CβG synthase. The initiation activity catalyzes the transference of the first glucose from UDP-glucose to a yet-unidentified amino acid residue in the same protein. Elongation proceeds by the successive addition of glucose residues from UDP-glucose to the nonreducing end of the protein-linked β-1,2-oligosaccharide intermediate. Finally, the protein-linked intermediate is cyclized, and the cyclic glucan is released from the protein. These reactions do not explain, however, the mechanism by which the number of glucose residues in the cyclic structure is controlled. We now report that control of the degree of polymerization (DP) is carried out by a β-1,2-glucan phosphorylase present at the CβG synthase C-terminal domain. This last activity catalyzes the phosphorolysis of the β-1,2-glucosidic bond at the nonreducing end of the linear protein-linked intermediate, releasing glucose 1-phosphate. The DP is thus regulated by this “length-controlling” phosphorylase activity. To our knowledge, this is the first description of a control of the DP of homopolysaccharides. PMID:17921247

Intermediate-depth earthquakes linked to localized heating in dunite and harzburgite

NASA Astrophysics Data System (ADS)

Ohuchi, Tomohiro; Lei, Xinglin; Ohfuji, Hiroaki; Higo, Yuji; Tange, Yoshinori; Sakai, Takeshi; Fujino, Kiyoshi; Irifune, Tetsuo

2017-10-01

The occurrence of intermediate-depth and deep earthquakes at depths greater than 60 km in subducting slabs has long puzzled geoscientists. These earthquakes require some mechanism to accelerate the fault movement at high pressures above 1.8 GPa. Localized heating would contribute to faulting, but experimental evidence for this mechanism has been limited to pressures of up to 0.5 GPa. Here we conduct deformation experiments on dry dunite samples at pressures of 1.0 to 2.6 GPa and temperatures of 860 to 1,350 K--conditions close to those for relatively shallow intermediate-depth earthquakes. We observe plastic deformation of the dunite, followed by faulting and acoustic emissions at an accelerated strain rate of about 5 × 10-5 s-1 or higher. We find that ultrafine-grained gouge layers containing iron-rich melt films, which is indicative of a very high peak temperature of about 2,110 K along the fault planes. We also observe faulting in wet harzburgite--a dehydration product of antigorite--at natural stress levels of 0.3 to 0.4 gigapascals. We therefore suggest that intermediate-depth earthquakes can be induced by localized heating both in dry and wet subducting slabs, if the background strain rate exceeds a threshold value in the range from 10-16 to 10-13 s-1.

Tectonic Implications of Intermediate-depth Earthquakes Beneath the Northeast Caribbean

NASA Astrophysics Data System (ADS)

Mejia, H.; Pulliam, J.; Huerfano, V.; Polanco Rivera, E.

2016-12-01

The Caribbean-North American plate boundary transitions from normal subduction beneath the Lesser Antilles to oblique subduction at Hispaniola before becoming exclusively transform at Cuba. In the Greater Antilles, large earthquakes occur all along the plate boundary at shallow depths but intermediate-depth earthquakes (50-200 km focal depth) occur almost uniquely beneath eastern Hispaniola. Previous studies have suggested that regional tectonics may be dominated by, for example, opposing subducting slabs, tearing of the subducting North American slab, or "slab push" by the NA slab. In addition, the Bahamas Platform, located north of Hispaniola, is likely causing compressive stresses and clockwise rotation of the island. A careful examination of focal mechanisms of intermediate-depth earthquakes could clarify regional tectonics but seismic stations in the region have historically been sparse, so constraints on earthquake depths and focal mechanisms have been poor. In response, fifteen broadband sensors were deployed in the Dominican Republic in 2014, increasing the number of stations to twenty-two. To determine the roles earthquakes play in regional tectonics, a event catalog was created joining data from our stations and other regional stations for which event depths are greater than 50 km and magnitudes are greater than 3.5. All events have been relocated and focal mechanisms are presented for as many events as possible. Multiple probable fault planes are computed for each event. Compressive (P) and tensional (T) axes, from fault planes, are plotted in 3-dimensions with density distribution contours determined of each axis. Examining relationships between axes distributions and events helps constrain tectonic stresses at intermediate-depths beneath eastern Hispaniola. A majority of events show primary compressive axes oriented in a north-south direction, likely produced by collision with the Bahamas Platform.

Bright-field scanning confocal electron microscopy using a double aberration-corrected transmission electron microscope.

PubMed

Wang, Peng; Behan, Gavin; Kirkland, Angus I; Nellist, Peter D; Cosgriff, Eireann C; D'Alfonso, Adrian J; Morgan, Andrew J; Allen, Leslie J; Hashimoto, Ayako; Takeguchi, Masaki; Mitsuishi, Kazutaka; Shimojo, Masayuki

2011-06-01

Scanning confocal electron microscopy (SCEM) offers a mechanism for three-dimensional imaging of materials, which makes use of the reduced depth of field in an aberration-corrected transmission electron microscope. The simplest configuration of SCEM is the bright-field mode. In this paper we present experimental data and simulations showing the form of bright-field SCEM images. We show that the depth dependence of the three-dimensional image can be explained in terms of two-dimensional images formed in the detector plane. For a crystalline sample, this so-called probe image is shown to be similar to a conventional diffraction pattern. Experimental results and simulations show how the diffracted probes in this image are elongated in thicker crystals and the use of this elongation to estimate sample thickness is explored. Copyright © 2010 Elsevier B.V. All rights reserved.

Phenotyping for the dynamics of field wheat root system architecture

NASA Astrophysics Data System (ADS)

Chen, Xinxin; Ding, Qishuo; Błaszkiewicz, Zbigniew; Sun, Jiuai; Sun, Qian; He, Ruiyin; Li, Yinian

2017-01-01

We investigated a method to quantify field-state wheat RSA in a phenotyping way, depicting the 3D topology of wheat RSA in 14d periods. The phenotyping procedure, proposed for understanding the spatio-temporal variations of root-soil interaction and the RSA dynamics in the field, is realized with a set of indices of mm scale precision, illustrating the gradients of both wheat root angle and elongation rate along soil depth, as well as the foraging potential along the side directions. The 70d was identified as the shifting point distinguishing the linear root length elongation from power-law development. Root vertical angle in the 40 mm surface soil layer was the largest, but steadily decreased along the soil depth. After 98d, larger root vertical angle appeared in the deep soil layers. PAC revealed a stable root foraging potential in the 0-70d period, which increased rapidly afterwards (70-112d). Root foraging potential, explained by MaxW/MaxD ratio, revealed an enhanced gravitropism in 14d period. No-till post-paddy wheat RLD decreased exponentially in both depth and circular directions, with 90% roots concentrated within the top 20 cm soil layer. RER along soil depth was either positive or negative, depending on specific soil layers and the sampling time.

Phenotyping for the dynamics of field wheat root system architecture

PubMed Central

Chen, Xinxin; Ding, Qishuo; Błaszkiewicz, Zbigniew; Sun, Jiuai; Sun, Qian; He, Ruiyin; Li, Yinian

2017-01-01

We investigated a method to quantify field-state wheat RSA in a phenotyping way, depicting the 3D topology of wheat RSA in 14d periods. The phenotyping procedure, proposed for understanding the spatio-temporal variations of root-soil interaction and the RSA dynamics in the field, is realized with a set of indices of mm scale precision, illustrating the gradients of both wheat root angle and elongation rate along soil depth, as well as the foraging potential along the side directions. The 70d was identified as the shifting point distinguishing the linear root length elongation from power-law development. Root vertical angle in the 40 mm surface soil layer was the largest, but steadily decreased along the soil depth. After 98d, larger root vertical angle appeared in the deep soil layers. PAC revealed a stable root foraging potential in the 0–70d period, which increased rapidly afterwards (70–112d). Root foraging potential, explained by MaxW/MaxD ratio, revealed an enhanced gravitropism in 14d period. No-till post-paddy wheat RLD decreased exponentially in both depth and circular directions, with 90% roots concentrated within the top 20 cm soil layer. RER along soil depth was either positive or negative, depending on specific soil layers and the sampling time. PMID:28079107

Surface-based atlases of cerebellar cortex in the human, macaque, and mouse.

PubMed

Van Essen, David C

2002-12-01

This study describes surface reconstructions and associated flat maps that represent the highly convoluted shape of cerebellar cortex in three species: human, macaque, and mouse. The reconstructions were based on high-resolution structural MRI data obtained from other laboratories. The surface areas determined for the fiducial reconstructions are about 600 cm(2) for the human, 60 cm(2) for the macaque, and 0.8 cm(2) for the mouse. As expected from the ribbon-like pattern of cerebellar folding, the cerebellar flat maps are elongated along the axis parallel to the midline. However, the degree of elongation varies markedly across species. The macaque flat map is many times longer than its mean width, whereas the mouse flat map is only slightly elongated and the human map is intermediate in its aspect ratio. These cerebellar atlases, along with associated software for visualization and for mapping experimental data onto the atlas, are freely available to the neuroscience community (see http:/brainmap.wustl.edu).

Surface-based atlases of cerebellar cortex in the human, macaque, and mouse

NASA Technical Reports Server (NTRS)

Van Essen, David C.

2002-01-01

This study describes surface reconstructions and associated flat maps that represent the highly convoluted shape of cerebellar cortex in three species: human, macaque, and mouse. The reconstructions were based on high-resolution structural MRI data obtained from other laboratories. The surface areas determined for the fiducial reconstructions are about 600 cm(2) for the human, 60 cm(2) for the macaque, and 0.8 cm(2) for the mouse. As expected from the ribbon-like pattern of cerebellar folding, the cerebellar flat maps are elongated along the axis parallel to the midline. However, the degree of elongation varies markedly across species. The macaque flat map is many times longer than its mean width, whereas the mouse flat map is only slightly elongated and the human map is intermediate in its aspect ratio. These cerebellar atlases, along with associated software for visualization and for mapping experimental data onto the atlas, are freely available to the neuroscience community (see http:/brainmap.wustl.edu).

Source Analysis of Bucaramanga Nest Intermediate-Depth Earthquakes

NASA Astrophysics Data System (ADS)

Prieto, G. A.; Pedraza, P.; Dionicio, V.; Levander, A.

2016-12-01

Intermediate-depth earthquakes are those that occur at depths of 50 to 300 km in subducting lithosphere and can occasionally be destructive. Despite their ubiquity in earthquake catalogs, their physical mechanism remains unclear because ambient temperatures and pressures at such depths are expected to lead to ductile flow, rather than brittle failure, as a response to stress. Intermediate-depth seismicity rates vary substantially worldwide, even within a single subduction zone having highly clustered seismicity in some cases (Vrancea, Hindu-Kush, etc.). One such places in known as the Bucaramanga Nest (BN), one of the highest concentration of intermediate-depth earthquakes in the world. Previous work on these earthquakes has shown 1) Focal mechanisms vary substantially within a very small volume. 2) Radiation efficiency is small for M<5 events. 3) repeating and reverse polarity events are present. 4) Larger events show a complex behavior with two distinct rupture stages. Due to on-going efforts by the Colombian Geological Survey (SGC) to densify the national seismic network, it is now possible to better constrain the rupture behavior of these events. In our work we will present results from focal mechanisms based on waveform inversion as well as polarity and S/P amplitude ratios. These results will be contrasted to the detection and classification of repeating families. For the larger events we will determine source parameters and radiation efficiencies. Preliminary results show that reverse polarity events are present and that two main focal mechanisms, with their corresponding reverse polarity events are dominant. Our results have significant implications in our understanding of intermedaite-depth earthquakes and the stress conditions that are responsible for this unusual cluster of seismicity.

Fossil intermediate-depth earthquakes in subducting slabs linked to differential stress release

NASA Astrophysics Data System (ADS)

Scambelluri, Marco; Pennacchioni, Giorgio; Gilio, Mattia; Bestmann, Michel; Plümper, Oliver; Nestola, Fabrizio

2017-12-01

The cause of intermediate-depth (50-300 km) seismicity in subduction zones is uncertain. It is typically attributed either to rock embrittlement associated with fluid pressurization, or to thermal runaway instabilities. Here we document glassy pseudotachylyte fault rocks—the products of frictional melting during coseismic faulting—in the Lanzo Massif ophiolite in the Italian Western Alps. These pseudotachylytes formed at subduction-zone depths of 60-70 km in poorly hydrated to dry oceanic gabbro and mantle peridotite. This rock suite is a fossil analogue to an oceanic lithospheric mantle that undergoes present-day subduction. The pseudotachylytes locally preserve high-pressure minerals that indicate an intermediate-depth seismic environment. These pseudotachylytes are important because they are hosted in a near-anhydrous lithosphere free of coeval ductile deformation, which excludes an origin by dehydration embrittlement or thermal runaway processes. Instead, our observations indicate that seismicity in cold subducting slabs can be explained by the release of differential stresses accumulated in strong dry metastable rocks.

Characterization of two distinct beta2-microglobulin unfolding intermediates that may lead to amyloid fibrils of different morphology.

PubMed

Armen, Roger S; Daggett, Valerie

2005-12-13

The self-assembly of beta(2)-microglobulin into fibrils leads to dialysis-related amyloidosis. pH-mediated partial unfolding is required for the formation of the amyloidogenic intermediate that then self-assembles into amyloid fibrils. Two partially folded intermediates of beta(2)-microglobulin have been identified experimentally and linked to the formation of fibrils of distinct morphology, yet it remains difficult to characterize these partially unfolded states at high resolution using experimental approaches. Consequently, we have performed molecular dynamics simulations at neutral and low pH to determine the structures of these partially unfolded amyloidogenic intermediates. In the low-pH simulations, we observed the formation of alpha-sheet structure, which was first proposed by Pauling and Corey. Multiple simulations were performed, and two distinct intermediate state ensembles were identified that may account for the different fibril morphologies. The predominant early unfolding intermediate was nativelike in structure, in agreement with previous NMR studies. The late unfolding intermediate was significantly disordered, but it maintained an extended elongated structure, with hydrophobic clusters and residual alpha-extended chain strands in specific regions of the sequence that map to amyloidogenic peptides. We propose that the formation of alpha-sheet facilitates self-assembly into partially unfolded prefibrillar amyloidogenic intermediates.

Trapping of intermediates with substrate analog HBOCoA in the polymerizations catalyzed by class III polyhydroxybutyrate (PHB) synthase from Allochromatium vinosum.

PubMed

Chen, Chao; Cao, Ruikai; Shrestha, Ruben; Ward, Christina; Katz, Benjamin B; Fischer, Christopher J; Tomich, John M; Li, Ping

2015-05-15

Polyhydroxybutyrate (PHB) synthases (PhaCs) catalyze the formation of biodegradable PHB polymers that are considered as an ideal alternative to petroleum-based plastics. To provide strong evidence for the preferred mechanistic model involving covalent and noncovalent intermediates, a substrate analog HBOCoA was synthesized chemoenzymatically. Substitution of sulfur in the native substrate HBCoA with an oxygen in HBOCoA enabled detection of (HB)nOCoA (n = 2-6) intermediates when the polymerization was catalyzed by wild-type (wt-)PhaECAv at 5.84 h(-1). This extremely slow rate is due to thermodynamically unfavorable steps that involve the formation of enzyme-bound PHB species (thioesters) from corresponding CoA oxoesters. Synthesized standards (HB)nOCoA (n = 2-3) were found to undergo both reacylation and hydrolysis catalyzed by the synthase. Distribution of the hydrolysis products highlights the importance of the penultimate ester group as previously suggested. Importantly, the reaction between primed synthase [(3)H]-sT-PhaECAv and HBOCoA yielded [(3)H]-sTet-O-CoA at a rate constant faster than 17.4 s(-1), which represents the first example that a substrate analog undergoes PHB chain elongation at a rate close to that of the native substrate (65.0 s(-1)). Therefore, for the first time with a wt-synthase, strong evidence was obtained to support our favored PHB chain elongation model.

A putative hybrid swarm within Oonopsis foliosa (Asteraceae: Astereae)

USGS Publications Warehouse

Hughes, J.F.; Brown, G.K.

2004-01-01

Oo??nopsis foliosa var. foliosa and var. monocephala are endemic to short-grass steppe of southeastern Colorado and until recently were considered geographically disjunct. The only known qualitative feature separating these 2 varieties is floral head type; var. foliosa has radiate heads, whereas var. monocephala heads are discoid. Sympatry between these varieties is restricted to a small area in which a range of parental types and intermediate head morphologies is observed. We used distribution mapping, morphometric analyses, chromosome cytology, and pollen stainability to characterize the sympatric zone. Morphometrics confirms that the only discrete difference between var. foliosa and var. monocephala is radiate versus discoid heads, respectively. The outer florets of putative hybrid individuals ranged from conspicuously elongated yet radially symmetric disc-floret corollas, to elongated radially asymmetric bilabiate- or deeply cleft corollas, to stunted ray florets with appendages remnant of corolla lobes. Chromosome cytology of pollen mother cells from both putative parental varieties and a series of intermediate morphological types collected at the sympatric zone reveal evidence of translocation heterozygosity. Pollen stainability shows no significant differences in viability between the parental varieties and putative hybrids. The restricted distribution of putative hybrids to a narrow zone of sympatry between the parental types and the presence of meiotic chromosome-pairing anomalies in these intermediate plants are consistent with a hybrid origin. The high stainability of putative-hybrid pollen adds to a growing body of evidence that hybrids are not universally unfit.

Geographic variation in floral allometry suggests repeated transitions between selfing and outcrossing in a mixed mating plant.

PubMed

Summers, Holly E; Hartwick, Sally M; Raguso, Robert A

2015-05-01

Isometric and allometric scaling of a conserved floral plan could provide a parsimonious mechanism for rapid and reversible transitions between breeding systems. This scaling may occur during transitions between predominant autogamy and xenogamy, contributing to the maintenance of a stable mixed mating system. We compared nine disjunct populations of the polytypic, mixed mating species Oenothera flava (Onagraceae) to two parapatric relatives, the obligately xenogamous species O. acutissima and the mixed mating species O. triloba. We compared floral morphology of all taxa using principal component analysis (PCA) and developmental trajectories of floral organs using ANCOVA homogeneity of slopes. The PCA revealed both isometric and allometric scaling of a conserved floral plan. Three principal components (PCs) explained 92.5% of the variation in the three species. PC1 predominantly loaded on measures of floral size and accounts for 36% of the variation. PC2 accounted for 35% of the variation, predominantly in traits that influence pollinator handling. PC3 accounted for 22% of the variation, primarily in anther-stigma distance (herkogamy). During O. flava subsp. taraxacoides development, style elongation was accelerated relative to anthers, resulting in positive herkogamy. During O. flava subsp. flava development, style elongation was decelerated, resulting in zero or negative herkogamy. Of the two populations with intermediate morphology, style elongation was accelerated in one population and decelerated in the other. Isometric and allometric scaling of floral organs in North American Oenothera section Lavauxia drive variation in breeding system. Multiple developmental paths to intermediate phenotypes support the likelihood of multiple mating system transitions. © 2015 Botanical Society of America, Inc.

Creep and rupture of an ODS alloy with high stress rupture ductility. [Oxide Dispersion Strengthened

NASA Technical Reports Server (NTRS)

Mcalarney, M. E.; Arsons, R. M.; Howson, T. E.; Tien, J. K.; Baranow, S.

1982-01-01

The creep and stress rupture properties of an oxide (Y2O3) dispersion strengthened nickel-base alloy, which also is strengthened by gamma-prime precipitates, was studied at 760 and 1093 C. At both temperatures, the alloy YDNiCrAl exhibits unusually high stress rupture ductility as measured by both elongation and reduction in area. Failure was transgranular, and different modes of failure were observed including crystallographic fracture at intermediate temperatures and tearing or necking almost to a chisel point at higher temperatures. While the rupture ductility was high, the creep strength of the alloy was low relative to conventional gamma prime strengthened superalloys in the intermediate temperature range and to ODS alloys in the higher temperature range. These findings are discussed with respect to the alloy composition; the strengthening oxide phases, which are inhomogeneously dispersed; the grain morphology, which is coarse and elongated and exhibits many included grains; and the second phase inclusion particles occurring at grain boundaries and in the matrix. The creep properties, in particular the high stress dependencies and high creep activation energies measured, are discussed with respect to the resisting stress model of creep in particle strengthened alloys.

Model-based analysis of keratin intermediate filament assembly

NASA Astrophysics Data System (ADS)

Martin, Ines; Leitner, Anke; Walther, Paul; Herrmann, Harald; Marti, Othmar

2015-09-01

The cytoskeleton of epithelial cells consists of three types of filament systems: microtubules, actin filaments and intermediate filaments (IFs). Here, we took a closer look at type I and type II IF proteins, i.e. keratins. They are hallmark constituents of epithelial cells and are responsible for the generation of stiffness, the cellular response to mechanical stimuli and the integrity of entire cell layers. Thereby, keratin networks constitute an important instrument for cells to adapt to their environment. In particular, we applied models to characterize the assembly of keratin K8 and K18 into elongated filaments as a means for network formation. For this purpose, we measured the length of in vitro assembled keratin K8/K18 filaments by transmission electron microscopy at different time points. We evaluated the experimental data of the longitudinal annealing reaction using two models from polymer chemistry: the Schulz-Zimm model and the condensation polymerization model. In both scenarios one has to make assumptions about the reaction process. We compare how well the models fit the measured data and thus determine which assumptions fit best. Based on mathematical modelling of experimental filament assembly data we define basic mechanistic properties of the elongation reaction process.

Deep Arctic Ocean warming during the last glacial cycle

USGS Publications Warehouse

Cronin, T. M.; Dwyer, G.S.; Farmer, J.; Bauch, H.A.; Spielhagen, R.F.; Jakobsson, M.; Nilsson, J.; Briggs, W.M.; Stepanova, A.

2012-01-01

In the Arctic Ocean, the cold and relatively fresh water beneath the sea ice is separated from the underlying warmer and saltier Atlantic Layer by a halocline. Ongoing sea ice loss and warming in the Arctic Ocean have demonstrated the instability of the halocline, with implications for further sea ice loss. The stability of the halocline through past climate variations is unclear. Here we estimate intermediate water temperatures over the past 50,000 years from the Mg/Ca and Sr/Ca values of ostracods from 31 Arctic sediment cores. From about 50 to 11 kyr ago, the central Arctic Basin from 1,000 to 2,500 m was occupied by a water mass we call Glacial Arctic Intermediate Water. This water mass was 1–2 °C warmer than modern Arctic Intermediate Water, with temperatures peaking during or just before millennial-scale Heinrich cold events and the Younger Dryas cold interval. We use numerical modelling to show that the intermediate depth warming could result from the expected decrease in the flux of fresh water to the Arctic Ocean during glacial conditions, which would cause the halocline to deepen and push the warm Atlantic Layer into intermediate depths. Although not modelled, the reduced formation of cold, deep waters due to the exposure of the Arctic continental shelf could also contribute to the intermediate depth warming.

Saturated mutagenesis of ketoisovalerate decarboxylase V461 enabled specific synthesis of 1-pentanol via the ketoacid elongation cycle.

PubMed

Chen, Grey S; Siao, Siang Wun; Shen, Claire R

2017-09-12

Iterative ketoacid elongation has been an essential tool in engineering artificial metabolism, in particular the synthetic alcohols. However, precise control of product specificity is still greatly challenged by the substrate promiscuity of the ketoacid decarboxylase, which unselectively hijacks ketoacid intermediates from the elongation cycle along with the target ketoacid. In this work, preferential tuning of the Lactococcus lactis ketoisovalerate decarboxylase (Kivd) specificity toward 1-pentanol synthesis was achieved via saturated mutagenesis of the key residue V461 followed by screening of the resulting alcohol spectrum. Substitution of V461 with the small and polar amino acid glycine or serine significantly improved the Kivd selectivity toward the 1-pentanol precursor 2-ketocaproate by lowering its catalytic efficiency for the upstream ketoacid 2-ketobutyrate and 2-ketovalerate. Conversely, replacing V461 with bulky or charged side chains displayed severely adverse effect. Increasing supply of the iterative addition unit acetyl-CoA by acetate feeding further drove 2-ketoacid flux into the elongation cycle and enhanced 1-pentanol productivity. The Kivd V461G variant enabled a 1-pentanol production specificity around 90% of the total alcohol content with or without oleyl alcohol extraction. This work adds insight to the selectivity of Kivd active site.

Dehydration-driven stress transfer triggers intermediate-depth earthquakes

NASA Astrophysics Data System (ADS)

Ferrand, Thomas P.; Hilairet, Nadège; Incel, Sarah; Deldicque, Damien; Labrousse, Loïc; Gasc, Julien; Renner, Joerg; Wang, Yanbin; Green, Harry W., II; Schubnel, Alexandre

2017-05-01

Intermediate-depth earthquakes (30-300 km) have been extensively documented within subducting oceanic slabs, but their mechanics remains enigmatic. Here we decipher the mechanism of these earthquakes by performing deformation experiments on dehydrating serpentinized peridotites (synthetic antigorite-olivine aggregates, minerals representative of subduction zones lithologies) at upper mantle conditions. At a pressure of 1.1 gigapascals, dehydration of deforming samples containing only 5 vol% of antigorite suffices to trigger acoustic emissions, a laboratory-scale analogue of earthquakes. At 3.5 gigapascals, acoustic emissions are recorded from samples with up to 50 vol% of antigorite. Experimentally produced faults, observed post-mortem, are sealed by fluid-bearing micro-pseudotachylytes. Microstructural observations demonstrate that antigorite dehydration triggered dynamic shear failure of the olivine load-bearing network. These laboratory analogues of intermediate-depth earthquakes demonstrate that little dehydration is required to trigger embrittlement. We propose an alternative model to dehydration-embrittlement in which dehydration-driven stress transfer, rather than fluid overpressure, causes embrittlement.

Earthquake activity along the Himalayan orogenic belt

NASA Astrophysics Data System (ADS)

Bai, L.; Mori, J. J.

2017-12-01

The collision between the Indian and Eurasian plates formed the Himalayas, the largest orogenic belt on the Earth. The entire region accommodates shallow earthquakes, while intermediate-depth earthquakes are concentrated at the eastern and western Himalayan syntaxis. Here we investigate the focal depths, fault plane solutions, and source rupture process for three earthquake sequences, which are located at the western, central and eastern regions of the Himalayan orogenic belt. The Pamir-Hindu Kush region is located at the western Himalayan syntaxis and is characterized by extreme shortening of the upper crust and strong interaction of various layers of the lithosphere. Many shallow earthquakes occur on the Main Pamir Thrust at focal depths shallower than 20 km, while intermediate-deep earthquakes are mostly located below 75 km. Large intermediate-depth earthquakes occur frequently at the western Himalayan syntaxis about every 10 years on average. The 2015 Nepal earthquake is located in the central Himalayas. It is a typical megathrust earthquake that occurred on the shallow portion of the Main Himalayan Thrust (MHT). Many of the aftershocks are located above the MHT and illuminate faulting structures in the hanging wall with dip angles that are steeper than the MHT. These observations provide new constraints on the collision and uplift processes for the Himalaya orogenic belt. The Indo-Burma region is located south of the eastern Himalayan syntaxis, where the strike of the plate boundary suddenly changes from nearly east-west at the Himalayas to nearly north-south at the Burma Arc. The Burma arc subduction zone is a typical oblique plate convergence zone. The eastern boundary is the north-south striking dextral Sagaing fault, which hosts many shallow earthquakes with focal depth less than 25 km. In contrast, intermediate-depth earthquakes along the subduction zone reflect east-west trending reverse faulting.

Insights into North Atlantic deep water formation during the peak interglacial interval of Marine Isotope Stage 9 (MIS 9)

NASA Astrophysics Data System (ADS)

Mokeddem, Zohra; McManus, Jerry F.

2017-11-01

Foraminifera abundance and stable isotope records from ODP Site 984 (61.25°N, 24.04°W, 1648 m) in the North Atlantic are used to reconstruct surface circulation variations and the relative strength of the North Atlantic Deep Water (NADW) formation over the period spanning the peak warmth of Marine Interglacial Stage (MIS) 9e ( 324-336 ka). This interval includes the preceding deglaciation, Termination 4 (T4), and the subsequent glacial inception of MIS 9d. The records indicate a greatly reduced contribution of NADW during T4, as observed in more recent deglaciations. In contrast with the most recent deglaciation, the lack of a significant NADW signal extended from T4 well into the peak interglacial MIS 9e and persisted nearly until the transition to the subsequent glacial stage MIS 9d. Although NADW formation resumed during MIS 9e, only depths greater than 2000 m appear to have been ventilated. The poorly ventilated intermediate depth of Site 984 (<2000 m) may have resulted on one hand from a general reduction of deep water ventilation by NADW during the study interval or, on the other hand, from different pathways of the spread of newly formed NADW that bypassed the study location. The intermediate depths may have also been invaded by southern-sourced waters as the formation of intermediate depth NADW weakened. The absence of any significant NADW signal at the water depth of Site 984 during the climatic optimum contrasts sharply with subsequent interglacial peaks (MIS 5e and the Holocene). Despite the perturbed intermediate depth circulation, oceanic heat transport northeastward was not interrupted and may have contributed to the relatively mild interglacial conditions of MIS 9e.

Enhanced ID Pit Sizing Using Multivariate Regression Algorithm

NASA Astrophysics Data System (ADS)

Krzywosz, Kenji

2007-03-01

EPRI is funding a program to enhance and improve the reliability of inside diameter (ID) pit sizing for balance-of plant heat exchangers, such as condensers and component cooling water heat exchangers. More traditional approaches to ID pit sizing involve the use of frequency-specific amplitude or phase angles. The enhanced multivariate regression algorithm for ID pit depth sizing incorporates three simultaneous input parameters of frequency, amplitude, and phase angle. A set of calibration data sets consisting of machined pits of various rounded and elongated shapes and depths was acquired in the frequency range of 100 kHz to 1 MHz for stainless steel tubing having nominal wall thickness of 0.028 inch. To add noise to the acquired data set, each test sample was rotated and test data acquired at 3, 6, 9, and 12 o'clock positions. The ID pit depths were estimated using a second order and fourth order regression functions by relying on normalized amplitude and phase angle information from multiple frequencies. Due to unique damage morphology associated with the microbiologically-influenced ID pits, it was necessary to modify the elongated calibration standard-based algorithms by relying on the algorithm developed solely from the destructive sectioning results. This paper presents the use of transformed multivariate regression algorithm to estimate ID pit depths and compare the results with the traditional univariate phase angle analysis. Both estimates were then compared with the destructive sectioning results.

A morphospace for reef fishes: elongation is the dominant axis of body shape evolution.

PubMed

Claverie, Thomas; Wainwright, Peter C

2014-01-01

Tropical reef fishes are widely regarded as being perhaps the most morphologically diverse vertebrate assemblage on earth, yet much remains to be discovered about the scope and patterns of this diversity. We created a morphospace of 2,939 species spanning 56 families of tropical Indo-Pacific reef fishes and established the primary axes of body shape variation, the phylogenetic consistency of these patterns, and whether dominant patterns of shape change can be accomplished by diverse underlying changes. Principal component analysis showed a major axis of shape variation that contrasts deep-bodied species with slender, elongate forms. Furthermore, using custom methods to compare the elongation vector (axis that maximizes elongation deformation) and the main vector of shape variation (first principal component) for each family in the morphospace, we showed that two thirds of the families diversify along an axis of body elongation. Finally, a comparative analysis using a principal coordinate analysis based on the angles among first principal component vectors of each family shape showed that families accomplish changes in elongation with a wide range of underlying modifications. Some groups such as Pomacentridae and Lethrinidae undergo decreases in body depth with proportional increases in all body regions, while other families show disproportionate changes in the length of the head (e.g., Labridae), the trunk or caudal region in all combinations (e.g., Pempheridae and Pinguipedidae). In conclusion, we found that evolutionary changes in body shape along an axis of elongation dominates diversification in reef fishes. Changes in shape on this axis are thought to have immediate implications for swimming performance, defense from gape limited predators, suction feeding performance and access to some highly specialized habitats. The morphological modifications that underlie changes in elongation are highly diverse, suggesting a role for a range of developmental processes and functional consequences.

Depth-dependent variations in Achilles tendon deformations with age are associated with reduced plantarflexor performance during walking

PubMed Central

Thelen, Darryl G.

2015-01-01

The anatomical arrangement of the Achilles tendon (AT), with distinct fascicle bundles arising from the gastrocnemius and soleus muscles, may facilitate relatively independent behavior of the triceps surae muscles. A reduced capacity for sliding between adjacent tendon fascicles with age may couple gastrocnemius and soleus muscle behavior, thereby potentially contributing to diminished plantarflexor performance commonly observed in old adults. Nine healthy young (mean age, 23.9 yr) and eight healthy old (69.9 yr) adults walked at three speeds (0.75, 1.00, and 1.25 m/s) on a force-sensing treadmill. We coupled dynamic ultrasound imaging of the free AT with motion capture and inverse dynamic analyses to compute, in part: 1) depth-dependent variations in AT tissue displacements and elongations and 2) net ankle joint kinetics during push-off. The difference in displacements between superficial and deep AT regions, and in their corresponding elongations, did not differ between old and young adults at the slower two walking speeds (P > 0.61). However, old adults walked with 41% smaller depth-dependent variations in free AT displacements and elongations at 1.25 m/s (P = 0.02). These more uniform tendon deformations in old adults most strongly correlated with reduced peak ankle moment (R2 = 0.40), but also significantly correlated with reduced peak power generation (R2 = 0.15) and positive ankle work during push-off (R2 = 0.19) (P > 0.01). Our findings: 1) demonstrate a potential role for nonuniform AT deformations in governing gastrocnemius and soleus muscle-tendon function and 2) allude to altered tendon behavior that may contribute to the age-related reduction in plantarflexor performance during walking. PMID:26023223

Depth-dependent variations in Achilles tendon deformations with age are associated with reduced plantarflexor performance during walking.

PubMed

Franz, Jason R; Thelen, Darryl G

2015-08-01

The anatomical arrangement of the Achilles tendon (AT), with distinct fascicle bundles arising from the gastrocnemius and soleus muscles, may facilitate relatively independent behavior of the triceps surae muscles. A reduced capacity for sliding between adjacent tendon fascicles with age may couple gastrocnemius and soleus muscle behavior, thereby potentially contributing to diminished plantarflexor performance commonly observed in old adults. Nine healthy young (mean age, 23.9 yr) and eight healthy old (69.9 yr) adults walked at three speeds (0.75, 1.00, and 1.25 m/s) on a force-sensing treadmill. We coupled dynamic ultrasound imaging of the free AT with motion capture and inverse dynamic analyses to compute, in part: 1) depth-dependent variations in AT tissue displacements and elongations and 2) net ankle joint kinetics during push-off. The difference in displacements between superficial and deep AT regions, and in their corresponding elongations, did not differ between old and young adults at the slower two walking speeds (P > 0.61). However, old adults walked with 41% smaller depth-dependent variations in free AT displacements and elongations at 1.25 m/s (P = 0.02). These more uniform tendon deformations in old adults most strongly correlated with reduced peak ankle moment (R(2) = 0.40), but also significantly correlated with reduced peak power generation (R(2) = 0.15) and positive ankle work during push-off (R(2) = 0.19) (P > 0.01). Our findings: 1) demonstrate a potential role for nonuniform AT deformations in governing gastrocnemius and soleus muscle-tendon function and 2) allude to altered tendon behavior that may contribute to the age-related reduction in plantarflexor performance during walking. Copyright © 2015 the American Physiological Society.

Exploring Thermal Shear Runaway as a triggering process for Intermediate-Depth Earthquakes: Overview of the Northern Chilean seismic nest.

NASA Astrophysics Data System (ADS)

Derode, B.; Riquelme, S.; Ruiz, J. A.; Leyton, F.; Campos, J. A.; Delouis, B.

2014-12-01

The intermediate depth earthquakes of high moment magnitude (Mw ≥ 8) in Chile have had a relative greater impact in terms of damage, injuries and deaths, than thrust type ones with similar magnitude (e.g. 1939, 1950, 1965, 1997, 2003, and 2005). Some of them have been studied in details, showing paucity of aftershocks, down-dip tensional focal mechanisms, high stress-drop and subhorizontal rupture. At present, their physical mechanism remains unclear because ambient temperatures and pressures are expected to lead to ductile, rather than brittle deformation. We examine source characteristics of more than 100 intraslab intermediate depth earthquakes using local and regional waveforms data obtained from broadband and accelerometers stations of IPOC network in northern Chile. With this high quality database, we estimated the total radiated energy from the energy flux carried by P and S waves integrating this flux in time and space, and evaluated their seismic moment directly from both spectral amplitude and near-field waveform inversion methods. We estimated the three parameters Ea, τa and M0 because their estimates entail no model dependence. Interestingly, the seismic nest studied using near-field re-location and only data from stations close to the source (D<250km) appears to not be homogeneous in terms of depths, displaying unusual seismic gaps along the Wadati-Benioff zone. Moreover, as confirmed by other studies of intermediate-depth earthquakes in subduction zones, very high stress drop ( >> 10MPa) and low radiation efficiency in this seismic nest were found. These unusual seismic parameter values can be interpreted as the expression of the loose of a big quantity of the emitted energy by heating processes during the rupture. Although it remains difficult to conclude about the processes of seismic nucleation, we present here results that seem to support a thermal weakening behavior of the fault zones and the existence of thermal stress processes like thermal shear runaway as a preferred mechanism for intermediate earthquake triggering. Despite the non-exhaustive aspect of this study, data presented here lead to the necessity of new systematic near-field studies to obtain valuable conclusions and constrain more accurately the physics of rupture mechanisms of these intermediate-depth seismic event.

Enhancement of ductility and improvement of abnormal Goss grain growth of magnetostrictive Fe-Ga rolled alloys

NASA Astrophysics Data System (ADS)

Li, Ji-heng; Yuan, Chao; Mu, Xing; Bao, Xiao-qian; Gao, Xue-xu

2018-04-01

The influences of initial microstructures on the mechanical properties and the recrystallization texture of magnetostrictive 0.1at% NbC-doped Fe83Ga17 alloys were investigated. The directionally solidified columnar-grained structure substantially enhanced the tensile elongation at intermediate temperatures by suppressing fracture along the transverse boundaries. Compared with tensile elongations of 1.0% at 300°C and 12.0% at 500°C of the hot-forged equiaxed-grained alloys, the columnar-grained alloys exhibited substantially increased tensile elongations of 21.6% at 300°C and 46.6% at 500°C. In the slabs for rolling, the introduction of <001>-oriented columnar grains also promotes the secondary recrystallization of Goss grains in the finally annealed sheets, resulting in an improvement of the saturation magnetostriction. For the columnar-grained specimens, the inhomogeneous microstructure and disadvantage in number and size of Goss grains are improved in the primarily annealed sheets, which is beneficial to the abnormal growth of Goss grains during the final annealing process.

Stress drops for intermediate-depth intraslab earthquakes beneath Hokkaido, northern Japan

NASA Astrophysics Data System (ADS)

Kita, S.; Katsumata, K.

2015-12-01

Spatial variations in the stress drop for 1726 intermediate-depth intraslab earthquakes in the subducting Pacific plate beneath Hokkaido were examined, using precisely relocated hypocenters, the corner frequencies of events, and detailed determined geometry of the upper interface of the Pacific plate. The analysis results show that median stress drop for intraslab earthquakes generally increases with an increase in depth from 10 to 157 Mpa at depths of 70-300 km. Median stress drops for events in the oceanic crust decrease (9.9-6.8 MPa) at depths of 70-120 km and increase (6.8-17 MPa) at depths of 120- 170 km, whereas median stress drop for events in the oceanic mantle decrease (21.6-14.0 MPa) at depths of 70-170 km, where the geometry of the Pacific plate is well determined. The increase in stress drop with depth in the oceanic crust at depths of 120-170 km can be explained by a lithofacies change (increases in velocity and density and a decrease in the water content) due to the phase change with dehydration in the oceanic crust. At depths of 70-110 km, the decrease in the median stress drop in the oceanic crust would also be explained by that the temperature-induced rigidity decrease would be larger than that of the rigidity increase caused by lithofacies change and water content. Stress drops for events in the oceanic mantle were larger than those for events in the oceanic crust at depths of 70-120 km. Differences in both the rigidity of　the rock types and in the rupture mechanisms for events between the oceanic crust and mantle could be causes for the stress drop differences within a slab. These analysis results can help clarify the nature of intraslab earthquakes and provide information useful for the prediction of strong motion associated with earthquakes in the slab at intermediate depths.

Investigating category- and shape-selective neural processing in ventral and dorsal visual stream under interocular suppression.

PubMed

Ludwig, Karin; Kathmann, Norbert; Sterzer, Philipp; Hesselmann, Guido

2015-01-01

Recent behavioral and neuroimaging studies using continuous flash suppression (CFS) have suggested that action-related processing in the dorsal visual stream might be independent of perceptual awareness, in line with the "vision-for-perception" versus "vision-for-action" distinction of the influential dual-stream theory. It remains controversial if evidence suggesting exclusive dorsal stream processing of tool stimuli under CFS can be explained by their elongated shape alone or by action-relevant category representations in dorsal visual cortex. To approach this question, we investigated category- and shape-selective functional magnetic resonance imaging-blood-oxygen level-dependent responses in both visual streams using images of faces and tools. Multivariate pattern analysis showed enhanced decoding of elongated relative to non-elongated tools, both in the ventral and dorsal visual stream. The second aim of our study was to investigate whether the depth of interocular suppression might differentially affect processing in dorsal and ventral areas. However, parametric modulation of suppression depth by varying the CFS mask contrast did not yield any evidence for differential modulation of category-selective activity. Together, our data provide evidence for shape-selective processing under CFS in both dorsal and ventral stream areas and, therefore, do not support the notion that dorsal "vision-for-action" processing is exclusively preserved under interocular suppression. © 2014 Wiley Periodicals, Inc.

Slab temperature controls on the Tonga double seismic zone and slab mantle dehydration

PubMed Central

Wei, S. Shawn; Wiens, Douglas A.; van Keken, Peter E.; Cai, Chen

2017-01-01

Double seismic zones are two-layered distributions of intermediate-depth earthquakes that provide insight into the thermomechanical state of subducting slabs. We present new precise hypocenters of intermediate-depth earthquakes in the Tonga subduction zone obtained using data from local island–based, ocean-bottom, and global seismographs. The results show a downdip compressional upper plane and a downdip tensional lower plane with a separation of about 30 km. The double seismic zone in Tonga extends to a depth of about 300 km, deeper than in any other subduction system. This is due to the lower slab temperatures resulting from faster subduction, as indicated by a global trend toward deeper double seismic zones in colder slabs. In addition, a line of high seismicity in the upper plane is observed at a depth of 160 to 280 km, which shallows southward as the convergence rate decreases. Thermal modeling shows that the earthquakes in this “seismic belt” occur at various pressures but at a nearly constant temperature, highlighting the important role of temperature in triggering intermediate-depth earthquakes. This seismic belt may correspond to regions where the subducting mantle first reaches a temperature of ~500°C, implying that metamorphic dehydration of mantle minerals in the slab provides water to enhance faulting. PMID:28097220

Distribution, origin and implications of seismic stress release in shallow and intermediate-depth subduction systems

NASA Astrophysics Data System (ADS)

Chen, Po-Fei

A characterization of focal mechanisms is developed for shallow and intermediate-depth earthquakes in the context of the local geometry of subduction systems. Its application to the Ryukyu-Taiwan-Luzon system is used to refine the spatial distribution of characteristic groups of earthquakes in the framework of local tectonic processes, such as flipping of the polarity of subduction and the nascent processes of arc-continent collision. The Harvard catalogue of Centroid Moment Tensor solutions is expanded to include intermediate-depth earthquakes from the WWSSN-HGLP era (1962--1975). Seventy-six new solutions are obtained, with the resulting dataset estimated to be complete for M0 ≥ 1026 dyn-cm. While source mechanisms from our new dataset are generally similar to those previously compiled in the Harvard catalogue, seismic moment release rates are found to be significantly smaller for the WWSSN era. The intermediate-depth seismicity of South America is compiled from the Harvard catalogue, using projection along local slab coordinates, to determine along-strike variations in the distribution of earthquakes and in the geometry of their stress release. Slab geometry is investigated in relation to slab stresses and the presence or absence of arc volcanism. Steeper-dipping slabs are found to exhibit consistent down-dip extension, a higher rate of seismic moment release and surface volcanism. Visualization using slab coordinate projections is extended systematically to a global survey of the geometry of stress release in intermediate-depth earthquakes. Various proposed models for all subduction zones are appraised, as contributors to stress regimes, based on global data compilations. Down-dip stresses, where prominent, are found to be consistent with the thermo-mechanical and petrological force models. Slab-normal conjugate stresses generally support the concept of earthquake reactivation of fossil faults. Patterns of lateral stresses support the predictions of the so-called "punctured-ping-pong-ball" model.

ATXN2 with intermediate-length CAG/CAA repeats does not seem to be a risk factor in hereditary spastic paraplegia.

PubMed

Nielsen, Troels Tolstrup; Svenstrup, Kirsten; Budtz-Jørgensen, Esben; Eiberg, Hans; Hasholt, Lis; Nielsen, Jørgen E

2012-10-15

Hereditary spastic paraplegia (HSP) confines a group of heterogeneous neurodegenerative disorders characterized by progressive spasticity and lower limb weakness. Age of onset is highly variable even in familial cases with known mutations suggesting that the disease is modulated by other yet unknown parameters. Although progressive gait disturbances, lower limb spasticity and extensor plantar responses are hallmarks of HSP these characteristics are also found in other neurodegenerative disorders, e.g. amytrophic lateral sclerosis (ALS). HSP has been linked to ALS and frontotemporal degeneration with motor neuron disease (FTD-MND), since TDP-43 positive inclusions have recently been found in an HSP subtype, and TDP-43 are found in abundance in pathological inclusions of both ALS and FTD-MND. Furthermore, ataxin-2 (encoded by the gene ATXN2), a polyglutamine containing protein elongated in spinocerebellar ataxia type 2, has been shown to be a modulator of TDP-43 induced toxicity in ALS animal and cell models. Finally, it has been shown that ATXN2 with non-pathogenic intermediate-length CAG/CAA repeat elongations (encoding the polyglutamine tract) is a genetic risk factor of ALS. Considering the similarities in the disease phenotype and the neuropathological link between ALS and HSP we hypothesized that intermediate-length CAG/CAA repeats in ATXN2 could be a modulator of HSP. We show that in a cohort of 181 HSP patients 4.9 % of the patients had intermediate-length CAG/CAA repeats in ATXN2 which was not significantly different from the frequencies in a Danish control cohort or in American and European control populations. However, the mean age of onset was significantly lower in HSP patients with intermediate-length CAG/CAA repeats in ATXN2 compared to patients with normal length repeats. Based on these results we conclude that ATXN2 is most likely not a risk factor of HSP, whereas it might serve as a modulator of age of onset. Copyright © 2012 Elsevier B.V. All rights reserved.

Systematic variation in the depths of slabs beneath arc volcanoes

USGS Publications Warehouse

England, P.; Engdahl, R.; Thatcher, W.

2004-01-01

The depths to the tops of the zones of intermediate-depth seismicity beneath arc volcanoes are determined using the hypocentral locations of Engdahl et al. These depths are constant, to within a few kilometres, within individual arc segments, but differ by tens of kilometres from one arc segment to another. The range in depths is from 65 km to 130 km, inconsistent with the common belief that the volcanoes directly overlie the places where the slabs reach a critical depth that is roughly constant for all arcs. The depth to the top of the intermediate-depth seismicity beneath volcanoes correlates neither with age of the descending ocean floor nor with the thermal parameter of the slab. This depth does, however, exhibit an inverse correlation with the descent speed of the subducting plate, which is the controlling factor both for the thermal structure of the wedge of mantle above the slab and for the temperature at the top of the slab. We interpret this result as indicating that the location of arc volcanoes is controlled by a process that depends critically upon the temperature at the top of the slab, or in the wedge of mantle, immediately below the volcanic arc.

Marvels of enzyme catalysis at true atomic resolution: distortions, bond elongations, hidden flips, protonation states and atom identities.

PubMed

Neumann, Piotr; Tittmann, Kai

2014-12-01

Although general principles of enzyme catalysis are fairly well understood nowadays, many important details of how exactly the substrate is bound and processed in an enzyme remain often invisible and as such elusive. In fortunate cases, structural analysis of enzymes can be accomplished at true atomic resolution thus making possible to shed light on otherwise concealed fine-structural traits of bound substrates, intermediates, cofactors and protein groups. We highlight recent structural studies of enzymes using ultrahigh-resolution X-ray protein crystallography showcasing its enormous potential as a tool in the elucidation of enzymatic mechanisms and in unveiling fundamental principles of enzyme catalysis. We discuss the observation of seemingly hyper-reactive, physically distorted cofactors and intermediates with elongated scissile substrate bonds, the detection of 'hidden' conformational and chemical equilibria and the analysis of protonation states with surprising findings. In delicate cases, atomic resolution is required to unambiguously disclose the identity of atoms as demonstrated for the metal cluster in nitrogenase. In addition to the pivotal structural findings and the implications for our understanding of enzyme catalysis, we further provide a practical framework for resolution enhancement through optimized data acquisition and processing. Copyright © 2014 Elsevier Ltd. All rights reserved.

Distinct roles for the 5' and 3' untranslated regions in the degradation and accumulation of chloroplast tufA mRNA: identification of an early intermediate in the in vivo degradation pathway.

PubMed

Zicker, Alicia A; Kadakia, Crystal S; Herrin, David L

2007-03-01

Elongation factor Tu in Chlamydomonas reinhardtii is a chloroplast-encoded gene (tufA) whose 1.7-kb mRNA has a relatively short half-life. In the presence of chloramphenicol (CAP), which freezes translating chloroplast ribosomes, a 1.5-kb tufA RNA becomes prominent. Rifampicin-chase analysis indicates that the 1.5-kb RNA is a degradation intermediate, and mapping studies show that it is missing 176-180 nucleotides from the 5' end of tufA. The 5' terminus of the intermediate maps to a section of the untranslated region (UTR) predicted to be highly structured and to encode a small ORF. The intermediate could be detected in older cultures in the absence of CAP, indicating that it is not an artifact of drug treatment. Also, it did not overaccumulate in the chloroplast ribosome-deficient mutant, ac20 cr1, indicating its stabilization is specific to elongation-arrested ribosomes. To determine if the 5' UTR of tufA is destabilizing, the corresponding region of the atpA-aadA-rbcL gene was replaced with the tufA sequence, and introduced into the chloroplast genome; the 3' UTR was also substituted for comparison. Analysis of these transformants showed that the transcripts containing the tufA 3'-UTR accumulate to significantly lower levels. Data from constructs based on the vital reporter, Renilla luciferase, confirmed the importance of the tufA 3'-UTR in determining RNA levels, and suggested that the 5' UTR of tufA affects translation efficiency. These data indicate that the in vivo degradation of tufA mRNA begins in the 5' UTR, and is promoted by translation. The data also suggest, however, that the level of the mature RNA is determined more by the 3' UTR than the 5' UTR.

Frictional Properties of Main Fault Gouge of Mont Terri, Switzerland

NASA Astrophysics Data System (ADS)

Aoki, K.; Seshimo, K.; Guglielmi, Y.; Nussbaum, C.; Shimamoto, T.; Ma, S.; Yao, L.; Kametaka, M.; Sakai, T.

2016-12-01

JAEA participated in the Fault Slip Experiment of Mont Terri Project which aims at understanding (i) the conditions for slip activation and stability of clay faults, and (ii) the evolution of the coupling between fault slip, pore pressure and fluids migration. The experiment uses SIMFIP probe to estimate (i) the hydraulic and elastic properties of fault zone elements, (ii) the state of stresses across the fault zone and (iii) the fault zone apparent strength properties (friction coefficient and cohesion). To elaborate on the Fault Slip Experiment, JAEA performed friction experiment of borehole cores of depths 47.2m and 37.3m using a rotary-shear low to high-velocity friction apparatus at Institute of Geology, China Earthquake Administration. Friction experiments were performed either dry with room humidity or with 30wt% of H2O, at a normal stress of 1.38 MPa and at low to intermediate slip rates ranging 0.21 microns/s to 2.1mm/s. Sample from a depth of 37.3 m is a fault rock with scaly fabric with calcite veins, whereas that from 47.2 m in depth is a pelitic rock that disaggregates easily with water. Main experimental results are summarized as follows. (1) Gouge samples from both depths exhibit slight velocity-strengthening at V below 0.021 mm/s and notable velocity strengthening at V above approximately 0.021 mm/s. Frictional regimes can be classified into low-velocity and intermediate-velocity regimes, characterized by slight and clear velocity-strengthening behaviors, respectively. (2) Wet gouge from a depth of 47.2 m has mss of 0.12 0.2 at low V and 0.11 0.24 at intermediate V, while dry gouge from the same depth has mss two to three times as high as that for the wet gouge from the same depth. (3) In contrast, both dry and wet gouges from a depth of 37.3 m has mss of around 0.4 to 0.74 at low V and from around 0.45 to 0.75 at intermediate V. There are almost no differences between the dry and wet gouges from this depth (4) The wet gouge from 47.2 m depths has clear slip zone at the gouge-moving piston interface, but clear slip zones are missing in wet gouge from 37.3 m depth. (5) It is hoped that the frictional strength from the present experiments would give some insight on the initiation conditions of fault slip during fluid injection. Results of four other depths will be discussed at the session.

Shape of the piriform aperture in Gorilla gorilla, Pan troglodytes, and modern Homo sapiens: characterization and polymorphism analysis.

PubMed

Schmittbuhl, M; Le Minor, J M; Allenbach, B; Schaaf, A

1998-07-01

By using new methodologies based on automatic image analysis, the shape of the piriform aperture was analyzed in Gorilla gorilla (33 males, 13 females), Pan troglodytes (35 males, 22 females), and modern Homo sapiens (30 males, 12 females). The determination of the piriform aperture index (breadth/height) allowed the authors to demonstrate a marked elongation of the aperture in Homo compared with Gorilla and Pan. Individual characterization of the shape was possible with great precision and without ambiguity by using Fourier analysis. An absolute, interspecific partition between Gorilla, Pan, and Homo resulted from the canonical discriminant analysis of the Fourier descriptors. However, a closeness of shape between some individuals in Pan and some in Gorilla and Homo was observed, demonstrating a morphological continuum of the shape of the piriform aperture in hominoids: Pan was in intermediate position between Gorilla and Homo. Interspecific differences between Homo and the group Pan-Gorilla were explained principally by the differences in elongation (amplitude of the second harmonic) and pentagonality (amplitude of the fifth harmonic) and by differences in orientation of quadrangularity (phase of the fourth harmonic). Differences in the shape of the piriform aperture between Pan and Gorilla were explained by differences in orientation of elongation (phase of the second harmonic) and by differences in the component of triangularity (amplitude of the third harmonic). In Gorilla and Pan, the little, elongated, and relatively trapezoidal piriform aperture seems to be a shared primitive feature (plesiomorphic), whereas an elongated piriform aperture seems to be a characteristic and derived feature (apomorphic) of modern Homo sapiens.

Wave height estimates from pressure and velocity data at an intermediate depth in the presence of uniform currents

NASA Astrophysics Data System (ADS)

Basu, Biswajit

2017-12-01

Bounds on estimates of wave heights (valid for large amplitudes) from pressure and flow measurements at an arbitrary intermediate depth have been provided. Two-dimensional irrotational steady water waves over a flat bed with a finite depth in the presence of underlying uniform currents have been considered in the analysis. Five different upper bounds based on a combination of pressure and velocity field measurements have been derived, though there is only one available lower bound on the wave height in the case of the speed of current greater than or less than the wave speed. This article is part of the theme issue 'Nonlinear water waves'.

Dehydration-driven stress transfer triggers intermediate-depth earthquakes

PubMed Central

Ferrand, Thomas P.; Hilairet, Nadège; Incel, Sarah; Deldicque, Damien; Labrousse, Loïc; Gasc, Julien; Renner, Joerg; Wang, Yanbin; Green II, Harry W.; Schubnel, Alexandre

2017-01-01

Intermediate-depth earthquakes (30–300 km) have been extensively documented within subducting oceanic slabs, but their mechanics remains enigmatic. Here we decipher the mechanism of these earthquakes by performing deformation experiments on dehydrating serpentinized peridotites (synthetic antigorite-olivine aggregates, minerals representative of subduction zones lithologies) at upper mantle conditions. At a pressure of 1.1 gigapascals, dehydration of deforming samples containing only 5 vol% of antigorite suffices to trigger acoustic emissions, a laboratory-scale analogue of earthquakes. At 3.5 gigapascals, acoustic emissions are recorded from samples with up to 50 vol% of antigorite. Experimentally produced faults, observed post-mortem, are sealed by fluid-bearing micro-pseudotachylytes. Microstructural observations demonstrate that antigorite dehydration triggered dynamic shear failure of the olivine load-bearing network. These laboratory analogues of intermediate-depth earthquakes demonstrate that little dehydration is required to trigger embrittlement. We propose an alternative model to dehydration-embrittlement in which dehydration-driven stress transfer, rather than fluid overpressure, causes embrittlement. PMID:28504263

RNA polymerase gate loop guides the nontemplate DNA strand in transcription complexes.

PubMed

NandyMazumdar, Monali; Nedialkov, Yuri; Svetlov, Dmitri; Sevostyanova, Anastasia; Belogurov, Georgiy A; Artsimovitch, Irina

2016-12-27

Upon RNA polymerase (RNAP) binding to a promoter, the σ factor initiates DNA strand separation and captures the melted nontemplate DNA, whereas the core enzyme establishes interactions with the duplex DNA in front of the active site that stabilize initiation complexes and persist throughout elongation. Among many core RNAP elements that participate in these interactions, the β' clamp domain plays the most prominent role. In this work, we investigate the role of the β gate loop, a conserved and essential structural element that lies across the DNA channel from the clamp, in transcription regulation. The gate loop was proposed to control DNA loading during initiation and to interact with NusG-like proteins to lock RNAP in a closed, processive state during elongation. We show that the removal of the gate loop has large effects on promoter complexes, trapping an unstable intermediate in which the RNAP contacts with the nontemplate strand discriminator region and the downstream duplex DNA are not yet fully established. We find that although RNAP lacking the gate loop displays moderate defects in pausing, transcript cleavage, and termination, it is fully responsive to the transcription elongation factor NusG. Together with the structural data, our results support a model in which the gate loop, acting in concert with initiation or elongation factors, guides the nontemplate DNA in transcription complexes, thereby modulating their regulatory properties.

Strong Scaling and a Scarcity of Small Earthquakes Point to an Important Role for Thermal Runaway in Intermediate-Depth Earthquake Mechanics

NASA Astrophysics Data System (ADS)

Barrett, S. A.; Prieto, G. A.; Beroza, G. C.

2015-12-01

There is strong evidence that metamorphic reactions play a role in enabling the rupture of intermediate-depth earthquakes; however, recent studies of the Bucaramanga Nest at a depth of 135-165 km under Colombia indicate that intermediate-depth seismicity shows low radiation efficiency and strong scaling of stress drop with slip/size, which suggests a dramatic weakening process, as proposed in the thermal shear instability model. Decreasing stress drop with slip and low seismic efficiency could have a measurable effect on the magnitude-frequency distribution of small earthquakes by causing them to become undetectable at substantially larger seismic moment than would be the case if stress drop were constant. We explore the population of small earthquakes in the Bucaramanga Nest using an empirical subspace detector to push the detection limit to lower magnitude. Using this approach, we find ~30,000 small, previously uncatalogued earthquakes during a 6-month period in 2013. We calculate magnitudes for these events using their relative amplitudes. Despite the additional detections, we observe a sharp deviation from a Gutenberg-Richter magnitude frequency distribution with a marked deficiency of events at the smallest magnitudes. This scarcity of small earthquakes is not easily ascribed to the detectability threshold; tests of our ability to recover small-magnitude waveforms of Bucaramanga Nest earthquakes in the continuous data indicate that we should be able to detect events reliably at magnitudes that are nearly a full magnitude unit smaller than the smallest earthquakes we observe. The implication is that nearly 100,000 events expected for a Gutenberg-Richter MFD are "missing," and that this scarcity of small earthquakes may provide new support for the thermal runaway mechanism in intermediate-depth earthquake mechanics.

Links Between Earthquake Characteristics and Subducting Plate Heterogeneity in the 2016 Pedernales Ecuador Earthquake Rupture Zone

NASA Astrophysics Data System (ADS)

Bai, L.; Mori, J. J.

2016-12-01

The collision between the Indian and Eurasian plates formed the Himalayas, the largest orogenic belt on the Earth. The entire region accommodates shallow earthquakes, while intermediate-depth earthquakes are concentrated at the eastern and western Himalayan syntaxis. Here we investigate the focal depths, fault plane solutions, and source rupture process for three earthquake sequences, which are located at the western, central and eastern regions of the Himalayan orogenic belt. The Pamir-Hindu Kush region is located at the western Himalayan syntaxis and is characterized by extreme shortening of the upper crust and strong interaction of various layers of the lithosphere. Many shallow earthquakes occur on the Main Pamir Thrust at focal depths shallower than 20 km, while intermediate-deep earthquakes are mostly located below 75 km. Large intermediate-depth earthquakes occur frequently at the western Himalayan syntaxis about every 10 years on average. The 2015 Nepal earthquake is located in the central Himalayas. It is a typical megathrust earthquake that occurred on the shallow portion of the Main Himalayan Thrust (MHT). Many of the aftershocks are located above the MHT and illuminate faulting structures in the hanging wall with dip angles that are steeper than the MHT. These observations provide new constraints on the collision and uplift processes for the Himalaya orogenic belt. The Indo-Burma region is located south of the eastern Himalayan syntaxis, where the strike of the plate boundary suddenly changes from nearly east-west at the Himalayas to nearly north-south at the Burma Arc. The Burma arc subduction zone is a typical oblique plate convergence zone. The eastern boundary is the north-south striking dextral Sagaing fault, which hosts many shallow earthquakes with focal depth less than 25 km. In contrast, intermediate-depth earthquakes along the subduction zone reflect east-west trending reverse faulting.

Performance evaluation of extended depth of field microscopy in the presence of spherical aberration and noise

NASA Astrophysics Data System (ADS)

King, Sharon V.; Yuan, Shuai; Preza, Chrysanthe

2018-03-01

Effectiveness of extended depth of field microscopy (EDFM) implementation with wavefront encoding methods is reduced by depth-induced spherical aberration (SA) due to reliance of this approach on a defined point spread function (PSF). Evaluation of the engineered PSF's robustness to SA, when a specific phase mask design is used, is presented in terms of the final restored image quality. Synthetic intermediate images were generated using selected generalized cubic and cubic phase mask designs. Experimental intermediate images were acquired using the same phase mask designs projected from a liquid crystal spatial light modulator. Intermediate images were restored using the penalized space-invariant expectation maximization and the regularized linear least squares algorithms. In the presence of depth-induced SA, systems characterized by radially symmetric PSFs, coupled with model-based computational methods, achieve microscope imaging performance with fewer deviations in structural fidelity (e.g., artifacts) in simulation and experiment and 50% more accurate positioning of 1-μm beads at 10-μm depth in simulation than those with radially asymmetric PSFs. Despite a drop in the signal-to-noise ratio after processing, EDFM is shown to achieve the conventional resolution limit when a model-based reconstruction algorithm with appropriate regularization is used. These trends are also found in images of fixed fluorescently labeled brine shrimp, not adjacent to the coverslip, and fluorescently labeled mitochondria in live cells.

Plastic Responses of a Sessile Prey to Multiple Predators: A Field and Experimental Study

PubMed Central

Hirsch, Philipp Emanuel; Cayon, David; Svanbäck, Richard

2014-01-01

Background Theory predicts that prey facing a combination of predators with different feeding modes have two options: to express a response against the feeding mode of the most dangerous predator, or to express an intermediate response. Intermediate phenotypes protect equally well against several feeding modes, rather than providing specific protection against a single predator. Anti-predator traits that protect against a common feeding mode displayed by all predators should be expressed regardless of predator combination, as there is no need for trade-offs. Principal Findings We studied phenotypic anti-predator responses of zebra mussels to predation threat from a handling-time-limited (crayfish) and a gape-size-limited (roach) predator. Both predators dislodge mussels from the substrate but diverge in their further feeding modes. Mussels increased expression of a non-specific defense trait (attachment strength) against all combinations of predators relative to a control. In response to roach alone, mussels showed a tendency to develop a weaker and more elongated shell. In response to crayfish, mussels developed a harder and rounder shell. When exposed to either a combination of predators or no predator, mussels developed an intermediate phenotype. Mussel growth rate was positively correlated with an elongated weaker shell and negatively correlated with a round strong shell, indicating a trade-off between anti-predator responses. Field observations of prey phenotypes revealed the presence of both anti-predator phenotypes and the trade-off with growth, but intra-specific population density and bottom substrate had a greater influence than predator density. Conclusions Our results show that two different predators can exert both functionally equivalent and inverse selection pressures on a single prey. Our field study suggests that abiotic factors and prey population density should be considered when attempting to explain phenotypic diversity in the wild. PMID:25517986

A Morphospace for Reef Fishes: Elongation Is the Dominant Axis of Body Shape Evolution

PubMed Central

Claverie, Thomas; Wainwright, Peter C.

2014-01-01

Tropical reef fishes are widely regarded as being perhaps the most morphologically diverse vertebrate assemblage on earth, yet much remains to be discovered about the scope and patterns of this diversity. We created a morphospace of 2,939 species spanning 56 families of tropical Indo-Pacific reef fishes and established the primary axes of body shape variation, the phylogenetic consistency of these patterns, and whether dominant patterns of shape change can be accomplished by diverse underlying changes. Principal component analysis showed a major axis of shape variation that contrasts deep-bodied species with slender, elongate forms. Furthermore, using custom methods to compare the elongation vector (axis that maximizes elongation deformation) and the main vector of shape variation (first principal component) for each family in the morphospace, we showed that two thirds of the families diversify along an axis of body elongation. Finally, a comparative analysis using a principal coordinate analysis based on the angles among first principal component vectors of each family shape showed that families accomplish changes in elongation with a wide range of underlying modifications. Some groups such as Pomacentridae and Lethrinidae undergo decreases in body depth with proportional increases in all body regions, while other families show disproportionate changes in the length of the head (e.g., Labridae), the trunk or caudal region in all combinations (e.g., Pempheridae and Pinguipedidae). In conclusion, we found that evolutionary changes in body shape along an axis of elongation dominates diversification in reef fishes. Changes in shape on this axis are thought to have immediate implications for swimming performance, defense from gape limited predators, suction feeding performance and access to some highly specialized habitats. The morphological modifications that underlie changes in elongation are highly diverse, suggesting a role for a range of developmental processes and functional consequences. PMID:25409027

Environmental forcing of the Campeche cold-water coral province, southern Gulf of Mexico

NASA Astrophysics Data System (ADS)

Hebbeln, D.; Wienberg, C.; Wintersteller, P.; Freiwald, A.; Becker, M.; Beuck, L.; Dullo, C.; Eberli, G. P.; Glogowski, S.; Matos, L.; Forster, N.; Reyes-Bonilla, H.; Taviani, M.

2014-04-01

With an extension of > 40 km2 the recently discovered Campeche cold-water coral province located at the northeastern rim of the Campeche Bank in the southern Gulf of Mexico belongs to the largest coherent cold-water coral areas discovered so far. The Campeche province consists of numerous 20-40 m-high elongated coral mounds that are developed in intermediate water depths of 500 to 600 m. The mounds are colonized by a vivid cold-water coral ecosystem that covers the upper flanks and summits. The rich coral community is dominated by the framework-building Scleractinia Enallopsammia profunda and Lophelia pertusa, while the associated benthic megafauna shows a rather scarce occurrence. The recent environmental setting is characterized by a high surface water production caused by a local upwelling center and a dynamic bottom-water regime comprising vigorous bottom currents, obvious temporal variability, and strong density contrasts, which all together provide optimal conditions for the growth of cold-water corals. This setting - potentially supported by the diel vertical migration of zooplankton in the Campeche area - controls the delivering of food particles to the corals. The Campeche cold-water coral province is, thus, an excellent example highlighting the importance of the oceanographic setting in securing the food supply for the development of large and vivid cold-water coral ecosystems.

Puzzling mass movement features in the Navarinsky Canyon head, Bering Sea

USGS Publications Warehouse

Carlson, P.R.; Karl, Herman A.; Edwards, B.D.

1982-01-01

Two types of morphologic features in the head of Navarinsky Canyon are attributed to mass movement of near-surface sediment. A series of pull-aparts is located downslope of large sand waves. These pull-aparts, possibly induced by liquefaction, affect the upper 5 to 10 m of sandy sediment (water depths 350 to 600 m) on a 1o slope. A hummocky elongate mound of muddy sand (water depths 550 to 800 m) contains chaotic internal reflectors to a subbottom depth of 30 to 40 m and possibly is the product of a shallow slide. We speculate that Holocene seismicity is the likely triggering mechanism. ?? 1982 A. M. Dowden, Inc.

Subduction and dehydration of slow-spread oceanic lithosphere

NASA Astrophysics Data System (ADS)

Paulatto, M.; Laigle, M.; Galve, A.; Charvis, P.

2016-12-01

Water transported by subducting slabs affects the dynamics of subduction zones and is a major gateway in the global geochemical water cycle. During subduction much of the water stored in the slab is released via pore fluid escape and through metamorphic reactions that depend on the thermal regime. The most notable are eclogitization of hydrated basalt and gabbro and breakdown of serpentinite. Most constraints to date have been obtained at Pacific subduction zones, and have contributed to a model of slab dehydration applicable to normal fast-spread oceanic lithosphere with a mafic crust. Slow-spread crust however, is heterogeneous in thickness and composition and has a different water distribution than fast-spread crust. We use P-wave traveltimes from several active source seismic experiments and P- and S-wave traveltimes from shallow and intermediate depth (< 160 km) local earthquakes recorded on a vast amphibious array of OBSs and land seismometers to recover the 3D Vp and Vp/Vs structure of the central Lesser Antilles subduction zone from the surface to 160 km depth. This slab was formed by slow accretion at the Mid-Atlantic ridge and represents the global slow accretion rate end-member. We image the dipping low-Vp layer at the top of the slab corresponding to the hydrated slab crust penetrating to about 100 km depth. High Vp/Vs ratio on the slab top and in the forearc crust is interpreted as evidence of elevated fluid content either as free fluids or as bound water in hydrated minerals. A local minimum in Vp is observed on the slab top at 50 km depth, and forms an elongated trench-parallel anomaly. This anomaly is interrupted at the projection of the Marathon fracture zone. We suggest that this is the result of lateral variations in slab crust composition from normal mafic oceanic crust to tectonized oceanic crust consisting to a large extent of serpentinized peridotite near the fracture zone. Slab regions with normal mafic oceanic crust likely undergo eclogitization, resulting in voluminous water release over a narrow depth range. Serpentinized ultramafic crust, in contrast, may release water at a more constant rate. We infer that subduction of slow-spread lithosphere may result in heterogeneous water transport and release at subduction zones with implications for seismicity, magma generation and the geochemical budget.

Bending-related faulting and mantle serpentinization at the Middle America trench.

PubMed

Ranero, C R; Morgan, J Phipps; McIntosh, K; Reichert, C

2003-09-25

The dehydration of subducting oceanic crust and upper mantle has been inferred both to promote the partial melting leading to arc magmatism and to induce intraslab intermediate-depth earthquakes, at depths of 50-300 km. Yet there is still no consensus about how slab hydration occurs or where and how much chemically bound water is stored within the crust and mantle of the incoming plate. Here we document that bending-related faulting of the incoming plate at the Middle America trench creates a pervasive tectonic fabric that cuts across the crust, penetrating deep into the mantle. Faulting is active across the entire ocean trench slope, promoting hydration of the cold crust and upper mantle surrounding these deep active faults. The along-strike length and depth of penetration of these faults are also similar to the dimensions of the rupture area of intermediate-depth earthquakes.

Modeling generic aspects of ideal fibril formation

DOE Office of Scientific and Technical Information (OSTI.GOV)

Michel, D., E-mail: denis.michel@live.fr

Many different proteins self-aggregate into insoluble fibrils growing apically by reversible addition of elementary building blocks. But beyond this common principle, the modalities of fibril formation are very disparate, with various intermediate forms which can be reshuffled by minor modifications of physico-chemical conditions or amino-acid sequences. To bypass this complexity, the multifaceted phenomenon of fibril formation is reduced here to its most elementary principles defined for a linear prototype of fibril. Selected generic features, including nucleation, elongation, and conformational recruitment, are modeled using minimalist hypotheses and tools, by separating equilibrium from kinetic aspects and in vitro from in vivo conditions.more » These reductionist approaches allow to bring out known and new rudiments, including the kinetic and equilibrium effects of nucleation, the dual influence of elongation on nucleation, the kinetic limitations on nucleation and fibril numbers, and the accumulation of complexes in vivo by rescue from degradation. Overlooked aspects of these processes are also pointed: the exponential distribution of fibril lengths can be recovered using various models because it is attributable to randomness only. It is also suggested that the same term “critical concentration” is used for different things, involved in either nucleation or elongation.« less

Modeling generic aspects of ideal fibril formation

NASA Astrophysics Data System (ADS)

Michel, D.

2016-01-01

Many different proteins self-aggregate into insoluble fibrils growing apically by reversible addition of elementary building blocks. But beyond this common principle, the modalities of fibril formation are very disparate, with various intermediate forms which can be reshuffled by minor modifications of physico-chemical conditions or amino-acid sequences. To bypass this complexity, the multifaceted phenomenon of fibril formation is reduced here to its most elementary principles defined for a linear prototype of fibril. Selected generic features, including nucleation, elongation, and conformational recruitment, are modeled using minimalist hypotheses and tools, by separating equilibrium from kinetic aspects and in vitro from in vivo conditions. These reductionist approaches allow to bring out known and new rudiments, including the kinetic and equilibrium effects of nucleation, the dual influence of elongation on nucleation, the kinetic limitations on nucleation and fibril numbers, and the accumulation of complexes in vivo by rescue from degradation. Overlooked aspects of these processes are also pointed: the exponential distribution of fibril lengths can be recovered using various models because it is attributable to randomness only. It is also suggested that the same term "critical concentration" is used for different things, involved in either nucleation or elongation.

Reconstruction of intermediate water circulation in the tropical North Atlantic during the past 22,000 years

NASA Astrophysics Data System (ADS)

Xie, Ruifang C.; Marcantonio, Franco; Schmidt, Matthew W.

2014-09-01

Decades of paleoceanographic studies have reconstructed a well-resolved water mass structure for the deep Atlantic Ocean during the Last Glacial Maximum (LGM). However, the variability of intermediate water circulation in the tropics over the LGM and deglacial abrupt climate events is still largely debated. This study aims to reconstruct intermediate northern- and southern-sourced water circulation in the tropical North Atlantic during the past 22 kyr and attempts to confine the boundary between Antarctic Intermediate Water (AAIW) and northern-sourced intermediate water (i.e., upper North Atlantic Deep Water (NADW) or Glacial North Atlantic Intermediate Water) in the past. High-resolution Nd isotopic compositions of fish debris and acid-reductive leachate of bulk sediment in core VM12-107 (1079 m depth) from the Southern Caribbean are not in agreement. We suggest that the leachate method does not reliably extract the Nd isotopic compositions of seawater at this location, and that it needs to be tested in more detail in various oceanic settings. The fish debris εNd values display a general decrease from the early deglaciation to the end of the Younger Dryas, followed by a greater drop toward less radiogenic values into the early Holocene. We propose a potentially more radiogenic glacial northern endmember water mass and interpret this pattern as recording a recovery of the upper NADW during the last deglaciation. Comparing our new fish debris Nd isotope data to authigenic Nd isotope studies in the Florida Straits (546 and 751 m depth), we propose that both glacial and deglacial AAIW do not penetrate beyond the lower depth limit of modern AAIW in the tropical Atlantic.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Cuffey, R.J.; Pachut, J.F.

The Holocene reef-building coral Favia pallida was sampled at 4.5 m depth increments (to 40 m) from two reefs on Enewetak Atoll to examine intraspecific environmental effects. An exposed outer reef was massive and wall-like, whereas a sheltered lagoonal reef grew as a slender pinnacle. Corallite diameter and growth rate, two attributes retrievable in fossil corals, were measured with data partitioned into shallow (<20 m), intermediate (20 to 29 m), and deep-water (>29 m) subsets. Highly significant differences between depth zone populations were found for both corallite diameters and growth rates in analyses of individual and combined reef data sets.more » Canonical variates analyses (CVA) separated populations from depth zones along single, highly significant, functions. Centroids and 95% confidence intervals, calculated from CVA scores of colonies in each population, are widely separated for the lagoon reef and combined data sets. Conversely, populations from shallow and intermediate depths on the outer reef display overlapping confidence bars indicative of more gradational morphologic changes. When CV's were used to classify specimens to groups, misassignments of intermediate depth specimens to shallow or deep-water populations underscored the gradational nature of the environment. Completely intergrading populations of Favia pallida collected from different depths can be morphologically separated into statistically distinct groupings. A stratigraphic succession of such morphotypes might be interpreted as abruptly appearing separate species if sampling were not as uniform, systematic, and detailed as was possible on modern reefs. Analyses of evolutionary patterns must carefully assess potential effects of clinal variation if past evolutionary patterns are to be interpreted correctly.« less

Subduction of lower continental crust beneath the Pamir imaged by receiver functions from the seismological TIPAGE network

NASA Astrophysics Data System (ADS)

Schneider, F. M.; Yuan, X.; Schurr, B.; Mechie, J.; Sippl, C.; Kufner, S.; Haberland, C. A.; Minaev, V.; Oimahmadov, I.; Gadoev, M.; Abdybachaev, U.; Orunbaev, S.

2013-12-01

As the northwestern promontory of the Tibetan Plateau, the Pamir forms an outstanding part of the India-Asia convergence zone. The Pamir plateau has an average elevation of more than 4000 m surrounded by peaks exceeding 7000 m at its northern, eastern and southern borders. The Pamir is thought to consist of the same collage of continental terranes as Tibet. However, in this region the Indian-Asian continental collision presents an extreme situation since, compared to Tibet, in the Pamir a similar amount of north-south convergence has been accommodated within a much smaller distance. The Pamir hosts a zone of intermediate depth earthquakes being the seismic imprint of Earth's most spectacular active intra-continental subduction zone. We present receiver function (RF) images from the TIPAGE seismic profile giving evidence that the intermediate depth seismicity is situated within a subducted layer of lower continental crust: We observe a southerly dipping 10-15 km thick low-velocity zone (LVZ), that starts from the base of the crust and extends to a depth of more than 150 km enveloping the intermediate depth earthquakes that have been located with high precision from our local network records. In a second northwest to southeast cross section we observe that towards the western Pamir the dip direction of the LVZ bends to the southeast following the geometry of the intermediate depth seismic zone. Our observations imply that the complete arcuate intermediate depth seismic zone beneath the Pamir traces a slab of subducting Eurasian continental lower crust. These observations provide important implications for the geodynamics of continental collision: First, it shows that under extreme conditions lower crust can be brought to mantle depths despite its buoyancy, a fact that is also testified by the exhumation of ultra-high pressure metamorphic rocks. Recent results from teleseismic tomography show a signal of Asian mantle lithosphere down to 600 km depth, implying a great amount of mantle lithosphere to be involved in the subduction, which possibly transmits pull forces to the lower crust to overcome its buoyancy. Secondly, the observation that earthquakes occur within the subducted crust implies that similar to oceanic subduction, metamorphic processes within the lower continental crust can cause or enable earthquakes at depths, where the high pressure and temperature conditions would normally not allow brittle failure of rocks. For imaging of the dipping LVZ, cross sections of Q- and T-component RFs are generated using a migration technique that accounts for the inclination of the conversion layers. Furthermore we present a Moho map of the Pamir, showing crustal thickness in most places of the Pamir ranging between 65 km and 75 km, while the greatest Moho depths of around 80 km are observed at the upper end of the LVZ. The surrounding areas namely the Tajik Depression, and the Ferghana and Tarim Basins show Moho depths of around 40 to 45 km giving an estimate of the pre-collisional crustal thickness of the former Basin area that was overthrust by the Pamir.

Coupling of oceanic carbon and nitrogen facilitates spatially resolved quantitative reconstruction of nitrate inventories.

PubMed

Glock, Nicolaas; Erdem, Zeynep; Wallmann, Klaus; Somes, Christopher J; Liebetrau, Volker; Schönfeld, Joachim; Gorb, Stanislav; Eisenhauer, Anton

2018-03-23

Anthropogenic impacts are perturbing the global nitrogen cycle via warming effects and pollutant sources such as chemical fertilizers and burning of fossil fuels. Understanding controls on past nitrogen inventories might improve predictions for future global biogeochemical cycling. Here we show the quantitative reconstruction of deglacial bottom water nitrate concentrations from intermediate depths of the Peruvian upwelling region, using foraminiferal pore density. Deglacial nitrate concentrations correlate strongly with downcore δ 13 C, consistent with modern water column observations in the intermediate Pacific, facilitating the use of δ 13 C records as a paleo-nitrate-proxy at intermediate depths and suggesting that the carbon and nitrogen cycles were closely coupled throughout the last deglaciation in the Peruvian upwelling region. Combining the pore density and intermediate Pacific δ 13 C records shows an elevated nitrate inventory of >10% during the Last Glacial Maximum relative to the Holocene, consistent with a δ 13 C-based and δ 15 N-based 3D ocean biogeochemical model and previous box modeling studies.

Abundant aftershock sequence of the 2015 Mw7.5 Hindu Kush intermediate-depth earthquake

NASA Astrophysics Data System (ADS)

Li, Chenyu; Peng, Zhigang; Yao, Dongdong; Guo, Hao; Zhan, Zhongwen; Zhang, Haijiang

2018-05-01

The 2015 Mw7.5 Hindu Kush earthquake occurred at a depth of 213 km beneath the Hindu Kush region of Afghanistan. While many early aftershocks were missing from the global earthquake catalogues, this sequence was recorded continuously by eight broad-band stations within 500 km. Here we use a waveform matching technique to systematically detect earthquakes around the main shock. More than 3000 events are detected within 35 d after the main shock, as compared with 42 listed in the Advanced National Seismic System catalogue (or 196 in the International Seismological Centre catalogue). The aftershock sequence generally follows the Omori's law with a decay constant p = 0.92. We also apply the recently developed double-pair double-difference technique to relocate all detected aftershocks. Most of them are located to the west of the hypocentre of the main shock, consistent with the westward propagation of the main-shock rupture. The aftershocks outline a nearly vertical southward dipping plane, which matches well with one of the nodal planes of the main shock. We conclude that the aftershock sequence of this intermediate-depth earthquake shares many similarities with those for shallow earthquakes and infer that there are some common mechanisms responsible for shallow and intermediate-depth earthquakes.

Thermally resistant polymers for fuel tank sealants

NASA Technical Reports Server (NTRS)

Webster, J. A.

1973-01-01

Imide-linked perfluoroalkylene ether polymers, that were developed for the high temperature fuel tank sealant application, are discussed. Modifications of polymer structure and properties were realized through use of a new aromatic dianhydride intermediate containing an ether-linked perfluoroalkylene segment. Tests of thermal, oxidative and hydrolytic stability, fuel resistance, and adhesion are discussed along with tensile strength and elongation results. Efforts to effect a low temperature condensation of amic acid prepolymer to form imide links inside are described.

An oxide dispersion strengthened Ni-W-Al alloy with superior high temperature strength

NASA Technical Reports Server (NTRS)

Glasgow, T. K.

1976-01-01

An experimental oxide dispersion strengthened (ODS) alloy, WAZ-D, derived from the WAZ-20 composition was produced by the mechanical alloying process. Cast WAZ-20 is strengthened by both a high refractory metal content, and 70 volume percent of gamma prime. The ODS alloy WAZ-D was responsive to variables of alloy content, of attritor processing, of consolidation by extrusion, and of heat treatment. The best material produced had large highly elongated grains. It exhibited tensile strengths generally superior to a comparable cast alloy. The ODS alloy exhibited high temperature stress rupture life considerably superior to any known cast superalloy. Tensile and rupture ductility were low, as was intermediate temperature rupture life. Very low creep rates were noted and some specimens failed with essentially no third stage creep. Also the benefit derived from the oxide dispersion, far out-weighed that from the elongated microstructure alone.

Variation in tolerance of rice to long-term stagnant flooding that submerges most of the shoot will aid in breeding tolerant cultivars

PubMed Central

Vergara, Georgina V.; Nugraha, Yudhistira; Esguerra, Manuel Q.; Mackill, David J.; Ismail, Abdelbagi M.

2014-01-01

Stagnant flooding (SF) is a major problem in rainfed lowlands where floodwater of 25–50 cm stagnates in the field for most of the season. We aimed to establish a system for phenotyping SF tolerance and identifying tolerant germplasm through screening of landraces. A total of 626 rice accessions were evaluated over 3 years under control conditions and two levels of SF. Floodwater was raised to 20 cm at 25 or 30 days after transplanting (DAT). In one trial, the depth was increased subsequently by 5 cm a week and in another (severe stress), it was increased to 40 cm at 37 DAT and to 50 cm at 42 DAT. In both trials, water depth was maintained at 50–60 cm until maturity. In all cases, no plant was completely submerged. Plant height, elongation rate and yield were measured at maturity. Genotypes best suited to SF showed moderate elongation of 1.3–2.3 cm day−1 under SF. In contrast, semi-dwarf and fast-elongating types performed poorly. Subsequent trials using 18 genotypes, including six pairs of near isogenic lines (NILs) with or without SUB1 showed that all SUB1 NILs were sensitive to SF. Five of the other six genotypes contained SUB1 and were SF tolerant, suggesting the possibility of combining tolerances to complete submergence (SUB1) and SF. Stem starch and soluble sugar concentrations were similar under control conditions among the 18 genotypes, but starch was depleted by 37 % under SF, with less depletion in tolerant genotypes. SUB1 NILs contained similar concentrations of starch and sugars under SF. We conclude that survival and yield under SF are dependent on moderate elongation, high tillering, lesser carbohydrate depletion and higher fertility. The tolerant genotypes identified here performed strongly in both wet and dry seasons and will be used to identify tolerance mechanisms and alleles for use in marker-assisted breeding. PMID:25202124

Extension of the energy-to-moment parameter Θ to intermediate and deep earthquakes

NASA Astrophysics Data System (ADS)

Saloor, Nooshin; Okal, Emile A.

2018-01-01

We extend to intermediate and deep earthquakes the slowness parameter Θ originally introduced by Newman and Okal (1998). Because of the increasing time lag with depth between the phases P, pP and sP, and of variations in anelastic attenuation parameters t∗ , we define four depth bins featuring slightly different algorithms for the computation of Θ . We apply this methodology to a global dataset of 598 intermediate and deep earthquakes with moments greater than 1025 dyn∗cm. We find a slight increase with depth in average values of Θ (from -4.81 between 80 and 135 km to -4.48 between 450 and 700 km), which however all have intersecting one- σ bands. With widths ranging from 0.26 to 0.31 logarithmic units, these are narrower than their counterpart for a reference dataset of 146 shallow earthquakes (σ = 0.55). Similarly, we find no correlation between values of Θ and focal geometry. These results point to stress conditions within the seismogenic zones inside the Wadati-Benioff slabs more homogeneous than those prevailing at the shallow contacts between tectonic plates.

Optics for multimode lasers with elongated depth of field

NASA Astrophysics Data System (ADS)

Laskin, Alexander; Laskin, Vadim; Ostrun, Aleksei

2017-02-01

Modern multimode high-power lasers are widely used in industrial applications and control of their radiation, especially by focusing, is of great importance. Because of relatively low optical quality, characterized by high values of specifications Beam Parameter Product (BPP) or M², the depth of field by focusing of multimode laser radiation is narrow. At the same time laser technologies like deep penetration welding, cutting of thick metal sheets get benefits from elongated depth of field in area of focal plane, therefore increasing of zone along optical axis with minimized spot size is important technical task. As a solution it is suggested to apply refractive optical systems splitting an initial laser beam into several beamlets, which are focused in different foci separated along optical axis with providing reliable control of energy portions in each separate focus, independently of beam size or mode structure. With the multi-focus optics, the length of zone of material processing along optical axis is defined rather by distances between separate foci, which are determined by optical design of the optics and can be chosen according to requirements of a particular laser technology. Due to stability of the distances between foci there is provided stability of a technology process. This paper describes some design features of refractive multi-focus optics, examples of real implementations and experimental results will be presented as well.

Geochemical and sedimentological records of intermediate-depth circulation in the Labrador Sea since the Last Glacial Maximum

NASA Astrophysics Data System (ADS)

Hoffmann, S. S.; Dalsing, R.; McManus, J. F.

2016-12-01

Dynamical sedimentary proxies for deep ocean circulation, such as mean sortable silt size and 231Pa/230Th, allow the reconstruction of past changes in deep water circulation speed and ocean basin ventilation. This provides an important addition to traditional methods of deep water circulation reconstruction such as mapping water mass geometry through foraminiferal carbon isotopic records. We have produced records of mean sortable silt size from three intermediate-depth sediment core sites in the Labrador Sea, taken from the continental slope and Orphan Knoll east of Newfoundland, to reconstruct changes in intermediate depth water circulation including Glacial North Atlantic Intermediate Water and Labrador Sea Water. Radiocarbon dating indicates that the cores span the Holocene, deglaciation and LGM. Increases in mean sortable silt size appear to coincide with Heinrich Event 1, the Older Dryas, Younger Dryas, and mid-late Holocene, which could suggest increased bottom current speeds at these times. However, ice-rafted debris contributes to marine sediments in this region, and mean sortable silt size at times of major IRD input such as Heinrich Event 1 may therefore reflect multiple influences. We will use inverse modeling techniques to determine likely end members contributing to the sortable silt fraction and to correct for the effect of IRD on sortable silt size, allowing a better understanding of the influence of current speed on these samples. We combine these sortable silt measurements with the sedimentary geochemical proxy 231Pa/230Th, which has been used to reconstruct changes in North Atlantic meridional overturning circulation. New 231Pa/230Th data from cores KN158-4-27/28, which provided our best-resolved sortable silt record, will allow us to compare results from the two dynamical proxies to better understand both the behavior of these proxies in the Labrador Sea, and the history of intermediate-depth circulation and ventilation in the Labrador Sea during major abrupt climate events and transitions.

Measuring the response of conifer seedlings to soil compaction stress

Treesearch

Howard G. Halverson; Robert P. Zisa

1982-01-01

A test of seedling growth response to several levels of soil compaction showed that root penetration depth was best correlated with soil compaction. Shoot biomass, root biomass, root elongation, and seedling height were not well correlated with compaction. The results reveal that most measurements of growth do not give a good indication of seedling response to stresses...

The Fast Rotating Star 51 Oph Probed by VEGA/CHARA

NASA Astrophysics Data System (ADS)

Jamialahmadi, N.; Berio, P.; Meilland, A.; Perraut, K.; Mourard, D.; Lopez, B.; Stee, P.; Nardetto, N.; Pichon, B.; Clausse, J. M.; Spang, A.; McAlister, H.; ten Brummelaar, T.

2015-12-01

Stellar rotation is a key in our understanding of both mass-loss and evolution of intermediate and massive stars. It can lead to anisotropic mass-loss in the form of radiative wind or an excretion disk. We used the VEGA visible beam combiner installed on the CHARA array that reaches a sub milliarcsecond resolution. We derived, for the first time, the extension and flattening of 51 Oph photosphere. We found an elongated ratio of 1.45 ± 0.12.

Final Scientific/Technical Report of Gas Hydrate Dynamics on the Alaskan Beaufort Continental Slope: Modeling and Field Characterization

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hornbach, Matthew J; Colwell, Frederick S; Harris, Robert

Methane Hydrates, a solid form of methane and water, exist at high pressures and low temperatures, occurs on every continental margin on Earth, represents one of the largest reservoirs of carbon on the planet, and, if destabilized, may play an important role in both slope stability and climate change. For decades, researchers have studied methane hydrates with the hope of determining if methane hydrates are destabilizing, and if so, how this destabilization might impact slope stability and ocean/atmosphere carbon budgets. In the past ~5 years, it has become well established that the upper “feather-edge” of methane hydrate stability (intermediate watermore » depths of ~200-500 meters below sea level) represents an important frontier for methane hydrates stability research, as this zone is most susceptible to destabilization due to minor fluctuations in ocean temperature in space and time. The Arctic Ocean—one of the fastest warming regions on Earth—is perhaps the best place to study possible changes to methane hydrate stability due to ocean warming. To address the stability of methane hydrates at intermediate ocean depths, Southern Methodist University in partnership with Oregon State University and The United State Geological Survey at Woods Hole began investigating methane hydrate stability in intermediate water depths below both the US Beaufort Sea and the Atlantic Margin, from 2012-2017. The work was funded by the Department of Energy’s (DOE) National Energy Technology Laboratory (NETL). The key goal of the SMU component of this study was to collect the first ever heat flow data in the Beaufort Sea and compare measured shallow (probe-based1) heat flow values with deeper (BSR-derived2) heat flow values, and from this, determine whether hydrates were in thermal equilibrium. In September 2016, SMU/OSU collected the first ever heat flow measurements in the US Beaufort Sea. Despite poor weather and rough seas, the cruise was a success, with 116 heat flow measurements acquired across the margin, spanning 4 transects separated by more than 400 km. Useable heat flow data exists for 97% (113) of probe heat flow measurements, revealing a clear picture of regional heat flow across the basin. During the past 8 months since the cruise, SMU researchers have processed the heat flow and thermal conductivity measurements and compared results to deeper heat flow estimates obtained from seismic data. The analysis reveals clear, consistent trends: All probe heat flow measurements in depths greater than 800 mbsl are consistent with BSR-derived values; heat flow measurements obtained in water depths between ~250-750 mbsl are systematically lower than those estimated from BSRs; and heat flow estimates in water depths shallower than ~250 mbsl are systematically warmer than deeper estimates. The consistency between shallow (probe) and deep (BSR) heat flow measurements at depths greater than ~750 m where ocean temperature changes are minimal supports the premise that the hydrates consist primarily of methane and represent a valuable tool for estimating heat flow. The anomalous cooling trend observed in the upper 250 m is consistent with expected seasonal effects observed in shallow ocean buoy measurements in the arctic, when cold, less dense melting sea ice cools the upper 200 m of the ocean during the summer as ice melting occurs. The discrepancy in heat flow at intermediate water depths is best explained via recent intermediate ocean temperature warming, where long-term (annual or longer) warming intermediate ocean bottom waters result in an anomalously low heat flow in shallow heat flow measurements. Using the characteristic 1D time-length scale for diffusion, we estimate that ocean temperature warming began no later than ~1200 years ago but arguably much more recently as results are limited by seismic resolution. More importantly, our analysis indicates methane hydrate is destabilizing not only in the upper feather edge (200-500 mbsl) but at depths as great as 750 mbsl. The intermediate ocean warming rate supports previous studies suggesting geologically rapid warming (>0.1 deg C/decade) at intermediate ocean depths in the Beaufort Sea. Assuming no further changes or additional warming, our analysis indicates methane hydrates will destabilize at seafloor depths shallower than 750 mbsl in the Beaufort Sea within the next ~3000 years. 1 Probe outfitted with sensors inserted into the seafloor sediment 2 Bottom-simulating reflector (BSR) seismic data indicates presence of hydrate deposits« less

Abrupt changes of intermediate water properties on the northeastern slope of the Bering Sea during the last glacial and deglacial period

NASA Astrophysics Data System (ADS)

Rella, Stephan F.; Tada, Ryuji; Nagashima, Kana; Ikehara, Minoru; Itaki, Takuya; Ohkushi, Ken'ichi; Sakamoto, Tatsuhiko; Harada, Naomi; Uchida, Masao

2012-09-01

Millennial-scale variability in the behavior of North Pacific Intermediate Water during the last glacial and deglacial period, and its association with Dansgaard-Oeschger (D-O) cycles and Heinrich events, are examined based on benthic foraminiferal oxygen and carbon isotopes (δ18Obf and δ13Cbf) and %CaCO3 using a sediment core recovered from the northeastern slope of the Bering Sea. A suite of positive δ18Obf excursions at intermediate depths of the Bering Sea, which seem at least in part associated with increases in the δ18Obf gradients between the Bering and Okhotsk Seas, suggest the Bering Sea as a proximate source of intermediate water during several severe stadial episodes in the last glacial and deglacial period. Absence of such δ18Obf gradients during periods of high surface productivity in the Bering and Okhotsk Seas, which we correlate to D-O interstadials, suggests a reduction in intermediate water production in the Bering Sea and subsequent introduction of nutrient-rich deep waters from the North Pacific into intermediate depths of the Bering Sea. We argue that a reorganization of atmospheric circulation in the high-latitude North Pacific during severe cold episodes in the last glacial and deglacial period created favorable conditions for brine rejection in the northeastern Bering Sea. The resulting salinity increase in the cold surface waters could have initiated intermediate (and deep) water formation that spread out to the North Pacific.

Scattering mechanisms in shallow undoped Si/SiGe quantum wells

DOE PAGES

Laroche, Dominique; Huang, S. -H.; Nielsen, Erik; ...

2015-10-07

We report the magneto-transport study and scattering mechanism analysis of a series of increasingly shallow Si/SiGe quantum wells with depth ranging from ~ 100 nm to ~ 10 nm away from the heterostructure surface. The peak mobility increases with depth, suggesting that charge centers near the oxide/semiconductor interface are the dominant scattering source. The power-law exponent of the electron mobility versus density curve, μ ∝ n α, is extracted as a function of the depth of the Si quantum well. At intermediate densities, the power-law dependence is characterized by α ~ 2.3. At the highest achievable densities in the quantummore » wells buried at intermediate depth, an exponent α ~ 5 is observed. Lastly, we propose and show by simulations that this increase in the mobility dependence on the density can be explained by a non-equilibrium model where trapped electrons smooth out the potential landscape seen by the two-dimensional electron gas.« less

Magnetovariational information to improve distortion diagnostics in deep magnetotelluric soundings

NASA Astrophysics Data System (ADS)

Borzotta, E.

2012-09-01

An interpretative experience from nine magnetotelluric soundings was accomplished in the central region of Argentina (32°S-34°S; 63°W-69°W), from the Andean region in the west to the platform zone in the east. To do this, magnetovariational information was used to improve the distortion diagnostics in magnetotelluric curves. Using Pilar Geomagnetic Observatory as a reference site, horizontal magnetic transfer functions were estimated, which were compared with the integrate conductivity at each location in field. As a result, a rather simple methodology is proposed to better approach the accurate positions of normal curves. Results suggest that, in this way, better formal interpretations of soundings may be reached. In addition, a more clear and comprehensible knowledge about the nature of lateral in-homogeneities is obtained; e.g., discovering 3-D effects no suspected from tectonic maps. This methodology seems to be particularly useful when-as in the present case-magnetotelluric soundings are far away each others; i.e., when effective volumes of soundings are not interpenetrated. Horizontal magnetovariational information suggests two elongate conductivity anomalies (about N25°-30°E), possibly associated with deep seated faults belonging to the South American regmatic network. These anomalies would be produced by partial melting in lower crust and possibly in the asthenospheric zone next to Andean Range. Another elongate anomaly (possibly of graphitic nature) is shown in the study region. It seems to be a marginal fault following the border between The Sierras Pampeanas dynamic zone and the South American craton. Magnetotelluric results indicate the study region can be considered as divided in a dynamic belt next to Andean Range and a cratonic zone eastward. The dynamic zone presents a well developed lower crust, with conductances ranging 300-4300 Siemens and depths of about 20-30 km. An asthenosphere close to the Andes with 1000 Siemens of conductance at 74 km depth is also observable. Heat flows of 63-70 mW/m2 are estimated next to Andes and 48 mW/m2, eastward, close to South American platform. The cratonic zone presents a first conductive layer with a conductance of 270 Siemens underneath BUL sounding site, but it does not seem to present lateral development. An intermediate conductive layer is also present in this region, but it does not have so much development. Therefore, this layer would not have asthenospheric character; so, the lithosphere would be tied to upper mantle. Heat flows ranging 40-35 mW/m2 were estimated for this cratonic region.

Structural outline of the detailed mechanism for elongation factor Ts-mediated guanine nucleotide exchange on elongation factor Tu.

PubMed

Thirup, Søren S; Van, Lan Bich; Nielsen, Tine K; Knudsen, Charlotte R

2015-07-01

Translation elongation factor EF-Tu belongs to the superfamily of guanine-nucleotide binding proteins, which play key cellular roles as regulatory switches. All G-proteins require activation via exchange of GDP for GTP to carry out their respective tasks. Often, guanine-nucleotide exchange factors are essential to this process. During translation, EF-Tu:GTP transports aminoacylated tRNA to the ribosome. GTP is hydrolyzed during this process, and subsequent reactivation of EF-Tu is catalyzed by EF-Ts. The reaction path of guanine-nucleotide exchange is structurally poorly defined for EF-Tu and EF-Ts. We have determined the crystal structures of the following reaction intermediates: two structures of EF-Tu:GDP:EF-Ts (2.2 and 1.8Å resolution), EF-Tu:PO4:EF-Ts (1.9Å resolution), EF-Tu:GDPNP:EF-Ts (2.2Å resolution) and EF-Tu:GDPNP:pulvomycin:Mg(2+):EF-Ts (3.5Å resolution). These structures provide snapshots throughout the entire exchange reaction and suggest a mechanism for the release of EF-Tu in its GTP conformation. An inferred sequence of events during the exchange reaction is presented. Copyright © 2015 The Authors. Published by Elsevier Inc. All rights reserved.

Transcriptional Elongation Control of Hepatitis B Virus Covalently Closed Circular DNA Transcription by Super Elongation Complex and BRD4.

PubMed

Francisco, Joel Celio; Dai, Qian; Luo, Zhuojuan; Wang, Yan; Chong, Roxanne Hui-Heng; Tan, Yee Joo; Xie, Wei; Lee, Guan-Huei; Lin, Chengqi

2017-10-01

Chronic hepatitis B virus (HBV) infection can lead to liver cirrhosis and hepatocellular carcinoma. HBV reactivation during or after chemotherapy is a potentially fatal complication for cancer patients with chronic HBV infection. Transcription of HBV is a critical intermediate step of the HBV life cycle. However, factors controlling HBV transcription remain largely unknown. Here, we found that different P-TEFb complexes are involved in the transcription of the HBV viral genome. Both BRD4 and the super elongation complex (SEC) bind to the HBV genome. The treatment of bromodomain inhibitor JQ1 stimulates HBV transcription and increases the occupancy of BRD4 on the HBV genome, suggesting the bromodomain-independent recruitment of BRD4 to the HBV genome. JQ1 also leads to the increased binding of SEC to the HBV genome, and SEC is required for JQ1-induced HBV transcription. These findings reveal a novel mechanism by which the HBV genome hijacks the host P-TEFb-containing complexes to promote its own transcription. Our findings also point out an important clinical implication, that is, the potential risk of HBV reactivation during therapy with a BRD4 inhibitor, such as JQ1 or its analogues, which are a potential treatment for acute myeloid leukemia. Copyright © 2017 American Society for Microbiology.

Microstructure evolution and tensile properties of Zr-2.5wt%Nb pressure tubes processed from billets with different microstructures

NASA Astrophysics Data System (ADS)

Kapoor, K.; Saratchandran, N.; Muralidharan, K.

1999-02-01

Starting with identical ingots, billets having different microstructures were obtained by three different processing methods for fabrication of Zr-2.5wt%Nb pressure tubes. The billets were further processed by hot extrusion and cold Pilger tube reducing to the finished product. Microstructural characterization was done at each stage of processing. The effects of the initial billet microstructure on the intermediate and final microstructure and mechanical property results were determined. It was found that the structure at each stage and the final mechanical properties depend strongly on the initial billet microstructure. The structure at the final stage consists of elongated alpha zirconium grains with a network of metastable beta zirconium phase. Some of this metastable phase transforms into stable beta niobium during thermomechanical processing. Billets with quenched structure resulted in less beta niobium at the final stage. The air cooled billets resulted in a large amount of beta niobium. The tensile properties, especially the percentage elongation, were found to vary for the different methods. Higher percentage elongation was observed for billets having quenched structure. Extrusion and forging did not produce any characteristic differences in the properties. The results were used to select a process flow sheet which yields the desired mechanical properties with suitable microstructure in the final product.

P-wave velocity structure of the uppermost mantle beneath Hawaii from traveltime tomography

USGS Publications Warehouse

Tilmann, F.J.; Benz, H.M.; Priestley, K.F.; Okubo, P.G.

2001-01-01

We examine the P-wave velocity structure beneath the island of Hawaii using P-wave residuals from teleseismic earthquakes recorded by the Hawaiian Volcano Observatory seismic network. The station geometry and distribution of events makes it possible to image the velocity structure between ~ 40 and 100 km depth with a lateral resolution of ~ 15 km and a vertical resolution of ~ 30 km. For depths between 40 and 80 km, P-wave velocities are up to 5 per cent slower in a broad elongated region trending SE-NW that underlies the island between the two lines defined by the volcanic loci. No direct correlation between the magnitude of the lithospheric anomaly and the current level of volcanic activity is apparent, but the slow region is broadened at ~ 19.8??N and narrow beneath Kilauea. In the case of the occanic lithosphere beneath Hawaii, slow seismic velocities are likely to be related to magma transport from the top of the melting zone at the base of the lithosphere to the surface. Thermal modelling shows that the broad elongated low-velocity zone cannot be explained in terms of conductive heating by one primary conduit per volcano but that more complicated melt pathways must exist.

Physical properties of the WAIS Divide ice core

USGS Publications Warehouse

Fitzpatrick, Joan J.; Voigt, Donald E.; Fegyveresi, John M.; Stevens, Nathan T.; Spencer, Matthew K.; Cole-Dai, Jihong; Alley, Richard B.; Jardine, Gabriella E.; Cravens, Eric; Wilen, Lawrence A.; Fudge, T. J.; McConnell, Joseph R.

2014-01-01

The WAIS (West Antarctic Ice Sheet) Divide deep ice core was recently completed to a total depth of 3405 m, ending ∼50 m above the bed. Investigation of the visual stratigraphy and grain characteristics indicates that the ice column at the drilling location is undisturbed by any large-scale overturning or discontinuity. The climate record developed from this core is therefore likely to be continuous and robust. Measured grain-growth rates, recrystallization characteristics, and grain-size response at climate transitions fit within current understanding. Significant impurity control on grain size is indicated from correlation analysis between impurity loading and grain size. Bubble-number densities and bubble sizes and shapes are presented through the full extent of the bubbly ice. Where bubble elongation is observed, the direction of elongation is preferentially parallel to the trace of the basal (0001) plane. Preferred crystallographic orientation of grains is present in the shallowest samples measured, and increases with depth, progressing to a vertical-girdle pattern that tightens to a vertical single-maximum fabric. This single-maximum fabric switches into multiple maxima as the grain size increases rapidly in the deepest, warmest ice. A strong dependence of the fabric on the impurity-mediated grain size is apparent in the deepest samples.

Shallow seismic source parameter determination using intermediate-period surface wave amplitude spectra

NASA Astrophysics Data System (ADS)

Fox, Benjamin D.; Selby, Neil D.; Heyburn, Ross; Woodhouse, John H.

2012-09-01

Estimating reliable depths for shallow seismic sources is important in both seismo-tectonic studies and in seismic discrimination studies. Surface wave excitation is sensitive to source depth, especially at intermediate and short-periods, owing to the approximate exponential decay of surface wave displacements with depth. A new method is presented here to retrieve earthquake source parameters from regional and teleseismic intermediate period (100-15 s) fundamental-mode surface wave recordings. This method makes use of advances in mapping global dispersion to allow higher frequency surface wave recordings at regional and teleseismic distances to be used with more confidence than in previous studies and hence improve the resolution of depth estimates. Synthetic amplitude spectra are generated using surface wave theory combined with a great circle path approximation, and a grid of double-couple sources are compared with the data. Source parameters producing the best-fitting amplitude spectra are identified by minimizing the least-squares misfit in logarithmic amplitude space. The F-test is used to search the solution space for statistically acceptable parameters and the ranges of these variables are used to place constraints on the best-fitting source. Estimates of focal mechanism, depth and scalar seismic moment are determined for 20 small to moderate sized (4.3 ≤Mw≤ 6.4) earthquakes. These earthquakes are situated across a wide range of geographic and tectonic locations and describe a range of faulting styles over the depth range 4-29 km. For the larger earthquakes, comparisons with other studies are favourable, however existing source determination procedures, such as the CMT technique, cannot be performed for the smaller events. By reducing the magnitude threshold at which robust source parameters can be determined, the accuracy, especially at shallow depths, of seismo-tectonic studies, seismic hazard assessments, and seismic discrimination investigations can be improved by the application of this methodology.

Causes of earthquake spatial distribution beneath the Izu-Bonin-Mariana Arc

NASA Astrophysics Data System (ADS)

Kong, Xiangchao; Li, Sanzhong; Wang, Yongming; Suo, Yanhui; Dai, Liming; Géli, Louis; Zhang, Yong; Guo, Lingli; Wang, Pengcheng

2018-01-01

Statistics about the occurrence frequency of earthquakes (1973-2015) at shallow, intermediate and great depths along the Izu-Bonin-Mariana (IBM) Arc is presented and a percent perturbation relative to P-wave mean value (LLNL-G3Dv3) is adopted to show the deep structure. The correlation coefficient between the subduction rate and the frequency of shallow seismic events along the IBM is 0.605, proving that the subduction rate is an important factor for shallow seismic events. The relationship between relief amplitudes of the seafloor and earthquake occurrences implies that some seamount chains riding on the Pacific seafloor may have an effect on intermediate-depth seismic events along the IBM. A probable hypothesis is proposed that the seamounts or surrounding seafloor with high degree of fracture may bring numerous hydrous minerals into the deep and may result in a different thermal structure compared to the seafloor where no seamounts are subducted. Fluids from the seamounts or surrounding seafloor are released to trigger earthquakes at intermediate-depth. Deep events in the northern and southern Mariana arc are likely affected by a horizontal propagating tear parallel to the trench.

Decarboxylation of malonyl-(acyl carrier protein) by 3-oxoacyl-(acyl carrier protein) synthases in plant fatty acid biosynthesis.

PubMed Central

Winter, E; Brummel, M; Schuch, R; Spener, F

1997-01-01

In order to identify regulatory steps in fatty acid biosynthesis, the influence of intermediate 3-oxoacyl-(acyl carrier proteins) (3-oxoacyl-ACPs) and end-product acyl-ACPs of the fatty acid synthase reaction on the condensation reaction was investigated in vitro, using total fatty acid synthase preparations and purified 3-oxoacyl-ACP synthases (KASs; EC 2.3.1.41) from Cuphea lanceolata seeds. KAS I and II in the fatty acid synthase preparations were assayed for the elongation of octanoyl- and hexadecanoyl-ACP respectively, and the accumulation of the corresponding condensation product 3-oxoacyl-ACP was studied by modulating the content of the reducing equivalentS NADH and NADPH. Complete omission of reducing equivalents resulted with either KAS in the abnormal synthesis of acetyl-ACP from malonyl-ACP by a decarboxylation reaction. Supplementation with NADPH or NADH, separately or in combination with recombinant 3-oxoacyl-ACP reductase (EC 1.1.1.100), led to a decrease in the amount of acetyl-ACP and a simultaneous increase in elongation products. This demonstrates that the accumulation of 3-oxoacyl-ACP inhibits the condensation reaction on the one hand, and induces the decarboxylation of malonyl-ACP on the other. By carrying out similar experiments with purified enzymes, this decarboxylation was attributed to the action of KAS. Our data point to a regulatory mechanism for the degradation of malonyl-ACP in plants which is activated by the accumulation of the fatty acid synthase intermediate 3-oxoacyl-ACP. PMID:9020860

Decarboxylation of malonyl-(acyl carrier protein) by 3-oxoacyl-(acyl carrier protein) synthases in plant fatty acid biosynthesis.

PubMed

Winter, E; Brummel, M; Schuch, R; Spener, F

1997-01-15

In order to identify regulatory steps in fatty acid biosynthesis, the influence of intermediate 3-oxoacyl-(acyl carrier proteins) (3-oxoacyl-ACPs) and end-product acyl-ACPs of the fatty acid synthase reaction on the condensation reaction was investigated in vitro, using total fatty acid synthase preparations and purified 3-oxoacyl-ACP synthases (KASs; EC 2.3.1.41) from Cuphea lanceolata seeds. KAS I and II in the fatty acid synthase preparations were assayed for the elongation of octanoyl- and hexadecanoyl-ACP respectively, and the accumulation of the corresponding condensation product 3-oxoacyl-ACP was studied by modulating the content of the reducing equivalentS NADH and NADPH. Complete omission of reducing equivalents resulted with either KAS in the abnormal synthesis of acetyl-ACP from malonyl-ACP by a decarboxylation reaction. Supplementation with NADPH or NADH, separately or in combination with recombinant 3-oxoacyl-ACP reductase (EC 1.1.1.100), led to a decrease in the amount of acetyl-ACP and a simultaneous increase in elongation products. This demonstrates that the accumulation of 3-oxoacyl-ACP inhibits the condensation reaction on the one hand, and induces the decarboxylation of malonyl-ACP on the other. By carrying out similar experiments with purified enzymes, this decarboxylation was attributed to the action of KAS. Our data point to a regulatory mechanism for the degradation of malonyl-ACP in plants which is activated by the accumulation of the fatty acid synthase intermediate 3-oxoacyl-ACP.

Magnolol and Honokiol Attenuate Apoptosis of Enterotoxigenic Escherichia Coli-Induced Intestinal Epithelium by Maintaining Secretion and Absorption Homeostasis and Protecting Mucosal Integrity.

PubMed

Deng, Yanli; Han, Xuefeng; Tang, Shaoxun; Li, Chengjian; Xiao, Wenjun; Tan, Zhiliang

2018-05-21

BACKGROUND The cortex of Magnolia officinalis has long been used as an element of traditional Chinese medicine for the treatment of anxiety, chronic bronchitis, and gastrointestinal dysfunction. This study aimed to elucidate the underlying mechanism of its functional ingredients (magnolol and honokiol) in modifying the secretion and absorption homeostasis and protecting mucosal integrity in an Enterotoxigenic Escherichia coli (ETEC)-induced diarrhea mouse model. MATERIAL AND METHODS This study established a diarrhea mouse model infected by ETEC at a dosage of 0.02 ml/g live body weight (BW) in vivo. Magnolol or honokiol was followed by an intraperitoneal administration at dosages of 100, 300, and 500 mg/kg BW according to a 3×3 factorial arrangement. The useful biomarkers for evaluating the integrity of intestinal tract and histologic injury were analyzed and morphological development (including villus height, crypt depth, and ratio of villus height to crypt depth) and the expressions of inflammatory cytokines were determined by real-time PCR. RESULTS The results showed that magnolol and honokiol (500 mg/kg BW) reduced the concentrations of NO, DAO, and DLA, and iNOS activity, and the mRNA expressions of the interferon gamma (IFN-γ) and interleukin 10 (IL-10), and inhibited intestinal epithelial cell apoptosis. Magnolol and honokiol (300 mg/kg BW) elongated the villus height and crypt depth and decreased the number of goblet cells and the ratio of villus height to crypt depth. CONCLUSIONS The current results indicate that magnolol and honokiol enhance the intestinal anti-inflammatory capacities, elongate the villus height and crypt depth, and reduce goblet cell numbers to inhibit the intestinal epithelium apoptosis and effectively protect the intestinal mucosa. These results show that magnolol and honokiol protect the intestinal mucosal integrity and regulate gastrointestinal dysfunction.

Macular Choroidal Small-Vessel Layer, Sattler's Layer and Haller's Layer Thicknesses: The Beijing Eye Study.

PubMed

Zhao, Jing; Wang, Ya Xing; Zhang, Qi; Wei, Wen Bin; Xu, Liang; Jonas, Jost B

2018-03-13

To study macular choroidal layer thickness, 3187 study participants from the population-based Beijing Eye Study underwent spectral-domain optical coherence tomography with enhanced depth imaging for thickness measurements of the macular small-vessel layer, including the choriocapillaris, medium-sized choroidal vessel layer (Sattler's layer) and large choroidal vessel layer (Haller's layer). In multivariate analysis, greater thickness of all three choroidal layers was associated (all P < 0.05) with higher prevalence of age-related macular degeneration (AMD) (except for geographic atrophy), while it was not significantly (all P > 0.05) associated with the prevalence of open-angle glaucoma or diabetic retinopathy. There was a tendency (0.07 > P > 0.02) toward thinner choroidal layers in chronic angle-closure glaucoma. The ratio of small-vessel layer thickness to total choroidal thickness increased (P < 0.001; multivariate analysis) with older age and longer axial length, while the ratios of Sattler's layer and Haller's layer thickness to total choroidal thickness decreased. A higher ratio of small-vessel layer thickness to total choroidal thickness was significantly associated with a lower prevalence of AMD (early type, intermediate type, late geographic type). Axial elongation-associated and aging-associated choroidal thinning affected Haller's and Sattler's layers more markedly than the small-vessel layer. Non-exudative and exudative AMD, except for geographic atrophy, was associated with slightly increased choroidal thickness.

Study of nonlinear interaction between bunched beam and intermediate cavities in a relativistic klystron amplifier

NASA Astrophysics Data System (ADS)

Wu, Y.; Xu, Z.; Li, Z. H.; Tang, C. X.

2012-07-01

In intermediate cavities of a relativistic klystron amplifier (RKA) driven by intense relativistic electron beam, the equivalent circuit model, which is widely adopted to investigate the interaction between bunched beam and the intermediate cavity in a conventional klystron design, is invalid due to the high gap voltage and the nonlinear beam loading in a RKA. According to Maxwell equations and Lorentz equation, the self-consistent equations for beam-wave interaction in the intermediate cavity are introduced to study the nonlinear interaction between bunched beam and the intermediate cavity in a RKA. Based on the equations, the effects of modulation depth and modulation frequency of the beam on the gap voltage amplitude and its phase are obtained. It is shown that the gap voltage is significantly lower than that estimated by the equivalent circuit model when the beam modulation is high. And the bandwidth becomes wider as the beam modulation depth increases. An S-band high gain relativistic klystron amplifier is designed based on the result. And the corresponding experiment is carried out on the linear transformer driver accelerator. The peak output power has achieved 1.2 GW with an efficiency of 28.6% and a gain of 46 dB in the corresponding experiment.

Inability to determine tissue health is main indication of allograft use in intermediate extent burns.

PubMed

Fletcher, John L; Cancio, Leopoldo C; Sinha, Indranil; Leung, Kai P; Renz, Evan M; Chan, Rodney K

2015-12-01

Cutaneous allograft is commonly used in the early coverage of excised burns when autograft is unavailable. However, allograft is also applied in intermediate-extent burns (25-50%), during cases in which it is possible to autograft. In this population, there is a paucity of data on the indications for allograft use. This study explores the indications for allograft usage in moderate size burns. Under an IRB-approved protocol, patients admitted to our burn unit between March 2003 and December 2010 were identified through a review of the burn registry. Data on allograft use, total burn surface area, operation performed, operative intent, number of operations, intensive care unit length of stay, and overall length of stay were collected and analyzed. Data are presented as means±standard deviations, except where noted. In the study period, 146 patients received allograft during their acute hospitalization. Twenty-five percent of allograft recipients sustained intermediate-extent burns. Patients with intermediate-extent burns received allograft later in their hospitalization than those with large-extent (50-75% TBSA) burns (6.8 days vs. 3.4 days, p=0.01). Allografted patients with intermediate-extent burns underwent more operations (10.8 vs. 6.1, p=0.002) and had longer hospitalizations (78.3 days vs. 40.9 days, p<0.001) than non-allografted patients, when controlled for TBSA. Clinical rationale for placement of allograft in this population included autograft failure, uncertain depth of excision, lack of autograft donor site, and wound complexity. When uncertain depth of excision was the indication, allograft was universally applied onto the face. In half of allografted intermediate-extent burn patients the inability to identify a viable recipient bed was the ultimate reason for allograft use. Unlike large body surface area burns, allograft skin use in intermediate-extent injury occurs later in the hospitalization and is driven by the inability to determine wound bed suitability for autograft application. Allograft application can be utilized to test recipient site viability in cases of autograft failure or uncertain depth of excision. Published by Elsevier Ltd.

Tectonic deformation of the Andes and the configuration of the subducted slab in central Peru: Results from a micro-seismic experiment

NASA Technical Reports Server (NTRS)

Suarez, G.; Gagnepain, J. J.; Cisternas, A.; Hatzfeld, D.; Molnar, P.; Ocola, L.; Roecker, S. W.; Viode, J. P.

1983-01-01

The vast majority of the microearthquakes recorded occurred to the east: on the Huaytapallana fault in the Eastern Cordillera or in the western margin of the sub-Andes. The sub-Andes appear to be the physiographic province subjected to the most intense seismic deformation. Focal depths for the crustal events here are as deep as 50 km, and the fault plane solutions, show thrust faulting on steep planes oriented roughly north-south. The Huaytapallana fault in the Cordillera Oriental also shows relatively high seismicity along a northeast-southwest trend that agrees with the fault scarp and the east dipping nodal plane of two large earthquakes that occurred on this fault in 1969. The recorded microearthquakes of intermediate depth show a flat seismic zone about 25 km thick at a depth of about 100 km. This agrees with the suggestion that beneath Peru the slab first dips at an angle of 30 deg to a depth of 100 km and then flattens following a quasi-horizontal trajectory. Fault plane solutions of intermediate depth microearthquakes have horizontal T axes oriented east-west.

Probing the Natural World, Level III, Student Guide: Investigating Variation. Intermediate Science Curriculum Study.

ERIC Educational Resources Information Center

Bonar, John R., Ed.; Hathway, James A., Ed.

This is the student's text of one unit of the Intermediate Science Curriculum Study (ISCS) for level III students (grade 9). This unit focuses on diversity in human populations, measurement, and data collection. Numerous activities are given and optional excursions encourage students to pursue a topic in greater depth. Data tables within the…

A quantitative analysis of global intermediate and deep seismicity

NASA Astrophysics Data System (ADS)

Ruscic, Marija; Becker, Dirk; Le Pourhiet, Laetitita; Agard, Philippe; Meier, Thomas

2017-04-01

The seismic activity in subduction zones around the world shows a large spatial variabilty with some regions exhibiting strong seismic activity down to depths of almost 700km while in other places seismicity terminates at depths of about 200 or 300 km. Also the decay of the number of seismic events or of the seismic moment with depth is more pronounced in some regions than in others. The same is true for the variability of the ratio of large to small events (the b-value of the Gutenberg-Richter relation) that is varying with depth. These observations are often linked to parameters of the downgoing plate like age or subduction velocity. In this study we investigate a subset of subduction zones utilizing the revised ISC catalogue of intermediate and deep seismicity to determine statistical parameters well suited to describe properties of intermediate deep and deep events. The seismicity is separated into three depth intervals from 50-175km, 175-400km and >400km based on the depth at which the plate contact decouples, the observed nearly exponential decay of the event rate with depth and the supposed depth of phase transition at 410 km depth where also an increase of the event number with depth is observed. For estimation of the b-value and the exponential decay with depth, a restriction of the investigated time interval to the period after 1997 produced significantly better results indicating a globally homogeneous magnitude scale with the magnitude of completeness of about Mw 5. On a global scale the b-value decreases with depth from values of about 1 at 50-175km to values of slightly below 0.8 for events below 400km. Also, there is a slight increase of the b-value with the age of the subducting plate. These changes in the b-value with depth and with age may indicate a varying fragmentation of the slab. With respect to the ratio of the seismic moment between deeper and shallower parts of the subduction zones a dependence on the age is apparent with older slabs exhibiting higher ratios indicating stronger hydration of older slabs and consequently stronger seismic activity at depth in older and thicker slabs. Furthermore, older slabs show the tendency to larger b-values. This indicates stronger fragmentation of older slabs favoring smaller events. Between 50 km and 300 km depth, seismicity in subduction zones decays nearly exponentially with depth. However, the majority of subduction zones show between about 60 km and 100 km lower seismic activity than expected by an exponential decay. This observation correlates well with findings from petrological studies that rocks are rarely scraped off from the downgoing plate at these depths indicating low seismic coupling and low stresses at the plate interface in a depth range below the seismogenic zone and above 100 km depth were dehydration reactions become virulent. Interestingly, the percentage of this deficit becomes larger with plate age for event frequency (reduced number of events), but decreases for moment release (events have larger magnitudes). It is observed that the forearc high is located above the plate interface with reduced seismic coupling. The forearc high is thus an indication of upward directed return flow along the seismically decoupled plate interface. In addition, it is found that the topography of the forearc high is larger above shallow dipping slabs. A correlation of the depth dependent seismic behavior with the subduction or trench velocity is not observed for the investigated subduction zones. Plate age seems to be the dominating factor for properties of intermediate deep and deep seismicity.

Meiotic Nuclear Oscillations Are Necessary to Avoid Excessive Chromosome Associations.

PubMed

Chacón, Mariola R; Delivani, Petrina; Tolić, Iva M

2016-11-01

Pairing of homologous chromosomes is a crucial step in meiosis, which in fission yeast depends on nuclear oscillations. However, how nuclear oscillations help pairing is unknown. Here, we show that homologous loci typically pair when the spindle pole body is at the cell pole and the nucleus is elongated, whereas they unpair when the spindle pole body is in the cell center and the nucleus is round. Inhibition of oscillations demonstrated that movement is required for initial pairing and that prolonged association of loci leads to mis-segregation. The double-strand break marker Rec25 accumulates in elongated nuclei, indicating that prolonged chromosome stretching triggers recombinatory pathways leading to mis-segregation. Mis-segregation is rescued by overexpression of the Holliday junction resolvase Mus81, suggesting that prolonged pairing results in irresolvable recombination intermediates. We conclude that nuclear oscillations exhibit a dual role, promoting initial pairing and restricting the time of chromosome associations to ensure proper segregation. Copyright © 2016 The Author(s). Published by Elsevier Inc. All rights reserved.

Texture evolution in Oxide Dispersion Strengthened (ODS) steel tubes during pilgering process

NASA Astrophysics Data System (ADS)

Vakhitova, E.; Sornin, D.; Barcelo, F.; François, M.

2017-10-01

Oxide Dispersion Strengthened (ODS) steels are foreseen as fuel cladding material in the coming generation of Sodium Fast Reactors (SFR). Cladding tubes are manufactured by hot extrusion and subsequent cold forming steps. In this study, a 9 wt% Cr ODS steel exhibiting α-γ phase transformation at high temperature is cold formed under industrial conditions with a large section reduction in two pilgering steps. The influence of pilgering process parameters and intermediate heat treatment on the microstructure evolution is studied experimentally using Electron Backscattering Diffraction (EBSD) and X-ray Diffraction (XRD) methods. Pilgered samples show elongated grains and a high texture formation with a preferential orientation along the rolling direction. During the heat treatment, grain morphology is recovered from elongated grains to almost equiaxed ones, while the well-known α-fiber texture presents an unexpected increase in intensity. The remarkable temperature stability of this fiber is attributed to a crystallographic structure memory effect during phase transformations.

FabQ, a Dual-Function Dehydratase/Isomerase, Circumvents the Last Step of the Classical Fatty Acid Synthesis Cycle

PubMed Central

Bi, Hongkai; Wang, Haihong; Cronan, John E.

2015-01-01

SUMMARY In the classical anaerobic pathway of unsaturated fatty acid biosynthesis, that of Escherichia coli, the double bond is introduced into the growing acyl chain by the FabA dehydratase/isomerase. Another dehydratase, FabZ, functions in the chain elongation cycle. In contrast, Aerococcus viridans has only a single FabA/FabZ homolog we designate FabQ. FabQ can not only replace the function of E. coli FabZ in vivo, but it also catalyzes the isomerization required for unsaturated fatty acid biosynthesis. Most strikingly, FabQ in combination with E. coli FabB imparts the surprising ability to bypass reduction of the trans-2-acyl-ACP intermediates of classical fatty acid synthesis. FabQ allows elongation by progressive isomerization reactions to form the polyunsaturated fatty acid, 3-hydroxy-cis-5, 7-hexadecadienoic acid, both in vitro and in vivo. FabQ therefore provides a potential pathway for bacterial synthesis of polyunsaturated fatty acids. PMID:23972938

Tracer signals of the intermediate layer of the Arabian Sea

NASA Astrophysics Data System (ADS)

Rhein, Monika; Stramma, Lothar; Plähn, Olaf

In 1995, hydrographic and chlorofluorocarbon (CFCs, components F11, F12) measurements were carried out in the Gulf of Aden, in the Gulf of Oman, and in the Arabian Sea. In the Gulf of Oman, the F12 concentrations in the Persian Gulf outflow (PGW) at about 300m depth were significantly higher than in ambient surface water with saturations reaching 270%. These high values could not be caused by air-sea gas exchange. The outflow was probably contaminated with oil, and the lipophilic character of the CFCs could then lead to the observed supersaturations. The intermediate F12 maximum decreased rapidly further east and south. At the Strait of Bab el Mandeb in the Gulf of Aden, the Red Sea outflow (RSW) was saturated with F12 to about 65% at 400m depth, and decreased to 50% while descending to 800m depth. The low saturation is not surprising, because the outflow contains deep and intermediate water masses from the Red Sea which were isolated from the surface for some time. The tracer contributions to the Arabian Sea for Indian Central Water (ICW) and PGW are about equal, while below 500m depth the RSW contribution greatly exceeds ICW. Modeling the CFC budget of the Arabian Sea, the inflow of ICW north of 12°N is estimated to be 1-6 Sv, depending mainly on the strength of the flow of Red Sea Water into the Arabian Sea.

Deglacial Evolution of Atlantic Mid-Depth and Intermediate-Depth Water Variability

NASA Astrophysics Data System (ADS)

Oppo, D.; Gebbie, G.; Huang, K. F.; Guo, W.; Schmittner, A.; Liu, Z.; Curry, W. B.

2014-12-01

Deglacial variations in the Atlantic Meridional Overturning Circulation (AMOC) feature prominently in hypotheses of deglacial climate variability and atmospheric CO2rise. However, there is lingering uncertainty in the glacial deepwater mass configuration (e.g. Gebbie, 2014) and deglacial AMOC variability is even more poorly understood. For example, the deglacial evolution of the contribution of northern and southern source waters to the middle and intermediate depths of the Atlantic is still vigorously debated. Here, we evaluate the evolution of subsurface Atlantic ventilation, emphasizing middle and intermediate depths, by comparing new and published records of water mass variability to output from transient model simulations designed to provide insight into the climatic and oceanographic effects of a dramatic reduction in the AMOC, such as apparently occurred during Heinrich Stadial 1 (Liu et al., 2009; Schmittner and Lund, 2014). Gebbie, G. (2014), How much did Glacial North Atlantic Water shoal? Paleoceanography, 29, 190-209, doi: 10.1002/2013PA002557. Liu, Z., B. Otto-Bliesner, F. He, E. Brady, R. Thomas, P. U. Clark, A. E. Carlson, J. Lynch-Stieglitz, W. Curry, E. Brook, D. Erickson, R. Jacob, J. Kutzbach, J., and J. Chen (2009), Transient climate simulation of last deglaciation with a new mechanism for Bølling-Allerød warming, Science, 325, 310-314. Schmittner, A., and Lund, D. C. (submitted), Carbon Isotopes Support Atlantic Meridional Overturning Circulation Decline as a Trigger for Early Deglacial CO2 rise Climate of the Past Discussions.

Fast Moment Magnitude Determination from P-wave Trains for Bucharest Rapid Early Warning System (BREWS)

NASA Astrophysics Data System (ADS)

Lizurek, Grzegorz; Marmureanu, Alexandru; Wiszniowski, Jan

2017-03-01

Bucharest, with a population of approximately 2 million people, has suffered damage from earthquakes in the Vrancea seismic zone, which is located about 170 km from Bucharest, at a depth of 80-200 km. Consequently, an earthquake early warning system (Bucharest Rapid earthquake Early Warning System or BREWS) was constructed to provide some warning about impending shaking from large earthquakes in the Vrancea zone. In order to provide quick estimates of magnitude, seismic moment was first determined from P-waves and then a moment magnitude was determined from the moment. However, this magnitude may not be consistent with previous estimates of magnitude from the Romanian Seismic Network. This paper introduces the algorithm using P-wave spectral levels and compares them with catalog estimates. The testing procedure used waveforms from about 90 events with catalog magnitudes from 3.5 to 5.4. Corrections to the P-wave determined magnitudes according to dominant intermediate depth events mechanism were tested for November 22, 2014, M5.6 and October 17, M6 events. The corrections worked well, but unveiled overestimation of the average magnitude result of about 0.2 magnitude unit in the case of shallow depth event ( H < 60 km). The P-wave spectral approach allows for the relatively fast estimates of magnitude for use in BREWS. The average correction taking into account the most common focal mechanism for radiation pattern coefficient may lead to overestimation of the magnitude for shallow events of about 0.2 magnitude unit. However, in case of events of intermediate depth of M6 the resulting M w is underestimated at about 0.1-0.2. We conclude that our P-wave spectral approach is sufficiently robust for the needs of BREWS for both shallow and intermediate depth events.

The Differences in Source Dynamics Between Intermediate-Depth and Deep EARTHQUAKES:A Comparative Study Between the 2014 Rat Islands Intermediate-Depth Earthquake and the 2015 Bonin Islands Deep Earthquake

NASA Astrophysics Data System (ADS)

Twardzik, C.; Ji, C.

2015-12-01

It has been proposed that the mechanisms for intermediate-depth and deep earthquakes might be different. While previous extensive seismological studies suggested that such potential differences do not significantly affect the scaling relationships of earthquake parameters, there has been only a few investigations regarding their dynamic characteristics, especially for fracture energy. In this work, the 2014 Mw7.9 Rat Islands intermediate-depth (105 km) earthquake and the 2015 Mw7.8 Bonin Islands deep (680 km) earthquake are studied from two different perspectives. First, their kinematic rupture models are constrained using teleseismic body waves. Our analysis reveals that the Rat Islands earthquake breaks the entire cold core of the subducting slab defined as the depth of the 650oC isotherm. The inverted stress drop is 4 MPa, compatible to that of intra-plate earthquakes at shallow depths. On the other hand, the kinematic rupture model of the Bonin Islands earthquake, which occurred in a region lacking of seismicity for the past forty years, according to the GCMT catalog, exhibits an energetic rupture within a 35 km by 30 km slip patch and a high stress drop of 24 MPa. It is of interest to note that although complex rupture patterns are allowed to match the observations, the inverted slip distributions of these two earthquakes are simple enough to be approximated as the summation of a few circular/elliptical slip patches. Thus, we investigate subsequently their dynamic rupture models. We use a simple modelling approach in which we assume that the dynamic rupture propagation obeys a slip-weakening friction law, and we describe the distribution of stress and friction on the fault as a set of elliptical patches. We will constrain the three dynamic parameters that are yield stress, background stress prior to the rupture and slip weakening distance, as well as the shape of the elliptical patches directly from teleseismic body waves observations. The study would help us getting a better understanding of the dynamic conditions that control the rupture behaviour of these two types of earthquakes, and subsequently improving our knowledge of the dynamics of subducting slabs.

Amorphous-amorphous transition in a porous coordination polymer.

PubMed

Ohtsu, Hiroyoshi; Bennett, Thomas D; Kojima, Tatsuhiro; Keen, David A; Niwa, Yasuhiro; Kawano, Masaki

2017-07-04

The amorphous state plays a key role in porous coordination polymer and metal-organic framework phase transitions. We investigate a crystalline-to-amorphous-to-amorphous-to-crystalline (CAAC) phase transition in a Zn based coordination polymer, by X-ray absorption fine structure (XAFS) and X-ray pair distribution function (PDF) analysis. We show that the system shows two distinct amorphous phases upon heating. The first involves a reversible transition to a desolvated form of the original network, followed by an irreversible transition to an intermediate phase which has elongated Zn-I bonds.

Geophysical Imprints of the Geodynamic Evolution of Moesia Following the Black Sea Opening

NASA Astrophysics Data System (ADS)

Besutiu, Lucian

2014-05-01

Genesis of the two types of the Moesia basement (the so called Walachian, and Dobrogean sectors) along with the complex fault system affecting its cover and basement are still debated issues. Besides, there are two other intriguing aspects raised by the seismicity map of Romania: the sub-crustal events in the bending zone of East Carpathians, and the crust seismicity of the eastern Moesian Plate (MoP). Both the intermediate-depth earthquakes within full intra-continental environment and the intense craton seismicity are unusual aspects, and their apparent association difficult to explain. The paper proposes an integrated geodynamic model of MoP able to justify its current tectonics and both the crustal events in front of Carpathians, and the intermediate-depth earthquakes in the Vrancea zone within the frame of a unique geodynamic process. It starts from the idea that tectonic and geodynamic evolution of the E MoP and the bending zone of East Carpathians has been strongly affected by the opening of the W Black Sea basin, and is currently maintained by active rifting in SW Arabian Plate. The model is supported by geophysical and geodetic evidence. Unlike some previous geology-based models assuming that Black Sea opened during a singular geodynamic event (northward subduction of the Neo-Tethys Ocean floor), the pattern of the gravity and geomagnetic field, along with off-shore seismics bring convincing evidence on the distinct timing of the W and E Black Sea basins opening. Fingerprints of the lithosphere expelled by the W Black Sea rifting in the NW inland may be seen in the distribution of compression (P) wave velocity. In-depth development of NW striking major faults (splitting MoP into numerous vertical compartments) is also well revealed by seismic tomography (e.g. Peceneaga-Camena Fault, as the limit between MoP and East European Plate (EEP), still separates two distinct P wave velocity domains at 150 km depth). A second major fault system was created by the downward bending of MoP pushed towards vertical edge of Intra-Alpine Plate. It seems that W Black Sea opening also created the necessary environment for a FFT unstable triple junction within the bending zone of East Carpathians (VTJ), to which intermediate-depth earthquakes should be associated through thermo-baric accommodation phenomena occurring within the lithosphere sunken into the upper mantle. The triangle-shape and in-depth increase of the lateral extension of the VTJ high velocity seismic body are revealed by the high accuracy P wave tomography performed within Vrancea zone. Current geodetic and geophysical monitoring in the area has suggested a close link between crust and intermediate-depth seismic events. The intensification in tectonic forces may firstly led to the intensification of crust seismicity in the Carpathians foreland (by provoking slips between the MoP vertical compartments), followed, after a time-span depending on the force intensity and upper mantle viscosity, by VTJ sinking and consequent intermediate-depth seismic events in the Vrancea zone.

The Intermediate Piano Stage: Exploring Teacher Perspectives and Insights

ERIC Educational Resources Information Center

Daniel, Ryan; Bowden, Julia

2013-01-01

While many piano students successfully progress beyond beginner status to reach what is commonly referred to as the intermediate stage, there is minimal research specific to this area of practice. This is despite the fact that there is a high drop-out rate at this stage. This research study therefore set out to develop an in-depth understanding of…

Probing the Natural World, Level III, Teacher's Edition: Investigating Variation. Intermediate Science Curriculum Study.

ERIC Educational Resources Information Center

Bonar, John R., Ed.; Hathway, James A., Ed.

This is the teacher's edition of one of the eight units of the Intermediate Science Curriculum Study (ISCS) for level III students (grade 9). This unit focuses on diversity in human populations, measurement, and data collection. Optional excursions are described for students who wish to study a topic in greater depth. An introduction describes…

Probing the Natural World, Level III, Teacher's Edition: Environmental Science. Intermediate Science Curriculum Study.

ERIC Educational Resources Information Center

Bonar, John R., Ed.; Hathway, James A., Ed.

This is the teacher's edition of one of the eight units of the Intermediate Science Curriculum Study (ISCS) for level III students (grade 9). This unit and its activities focuses on environmental pollution and hazards. Optional excursions are suggested for students who wish to study an area in greater depth. An introduction describes the problem…

Dehydration-driven stress transfer triggers intermediate-depth earthquakes

NASA Astrophysics Data System (ADS)

Ferrand, T. P.; Schubnel, A.; Hilairet, N.; Incel, S.; Deldicque, D.; Labrousse, L.; Gasc, J.; Renner, J.; Wang, Y.; Green, H. W., II

2016-12-01

Intermediate-depth earthquakes (30-300 km) have been extensively documented within subducting oceanic slabs but their physical mechanisms remain enigmatic. Earthquakes occur both in the upper and lower Wadati-Benioff planes of seismicity (UBP and LBP). The LBP is located in the mantle of the subducted oceanic lithosphere, 20-40 km below the plate interface. Several mechanisms have been proposed: dehydration embrittlement of antigorite, shear heating instabilities, and the reactivation of pre-existing shear zones. We dehydrated synthetic antigorite-olivine aggregates, a proxy for serpentinized mantle, during deformation at upper mantle conditions. Acoustic emissions (AEs) were recorded during dehydration of samples with antigorite contents as low as 5 vol.% and with up to 50 vol.%, deformed at pressures of 1.1 GPa and 3.5 GPa, respectively. Source characteristics of these AEs are compatible with faults sealed by fluid-bearing micro-pseudotachylytes in recovered samples, demonstrating that antigorite dehydration triggered dynamic shear failure of the olivine load-bearing network. These intermediate-depth earthquake analogs reconcile the apparent contradictions of previous laboratory studies and confirm that little mantle hydration, as suggested by seismic imaging, may suffice to generate LBP seismicity. We propose an alternative model to dehydration-embrittlement in which dehydration-induced stress transfer, rather than fluid overpressure, is the trigger of mantle rocks embrittlement.

Preparation of ordered mesoporous and macroporous thermoplastic polyurethane surfaces for potential medical applications.

PubMed

Chennell, Philip; Feschet-Chassot, Emmanuelle; Sautou, Valérie; Mailhot-Jensen, Bénédicte

2018-05-01

Thermoplastic polyurethanes are widely used in medical devices. In order to limit some of their shortfalls, like microbial attachment, surfaces modifications can be required. In this work, a two-step replication method was used to create ordered macroporous and mesoporous thermoplastic polyurethane surfaces using anodic aluminum oxide as master template. The intermediate mould materials that were tested were polystyrene and a polyacrylate resin with inorganic filler. All obtained surfaces were characterized by scanning electron microscopy. The initial anodic aluminum oxide surfaces possessed macro or mesopores, function of anodization conditions. The intermediate mould structure correctly replicated the pattern, but the polystyrene surface structures (pillars) were less resistant than the polyacrylate resin ones. The thermoplastic polyurethane pattern possessed macropores or mesopores of about 130 nm or 46 nm diameter and of about 300 nm or 99 nm interpore distances, respectively, in accordance with the initial pattern. Thermoplastic polyurethanes pore depth was however less than initial anodic aluminum oxide pore depth, linked to an incomplete replication during intermediate mould preparation (60 to 90% depth replication). The correct replication of the original pattern confirms that this novel fabrication method is a promising route for surface patterning of thermoplastic polyurethanes that could be used for medical applications.

Offshore submarine storage facility for highly chilled liquified gases

DOE Office of Scientific and Technical Information (OSTI.GOV)

Cook, S.F.

1982-12-28

Improvements in an offshore platform and submarine storage facility for highly chilled liquified gas, such as liquified natural gas, are disclosed. The improved facility includes an elongated, vertically oriented submerged anchoring frame to which one or more insulated storage tanks are moveably mounted so they can be positioned at a selected depth in the water. The double piston tank is constructed with improved seals to transfer ambient water pressure of the selected depth to the cryogenic liquified gas without intermixture. This transferred pressure at the depth selected aids in maintaining the liquified state of the stored liquified gas. Structural improvementsmore » to the tank facilitating ballasting, locking the double piston cylinders together and further facilitating surface access to the tank for inspection, repairs and removal, and structural improvements to the platform are disclosed.« less

Vertical Stratification of Peat Pore Water Dissolved Organic Matter Composition in a Peat Bog in Northern Minnesota

NASA Astrophysics Data System (ADS)

Tfaily, Malak M.; Wilson, Rachel M.; Cooper, William T.; Kostka, Joel E.; Hanson, Paul; Chanton, Jeffrey P.

2018-02-01

We characterized dissolved organic matter (DOM) composition throughout the peat column at the Marcell S1 forested bog in northern Minnesota and tested the hypothesis that redox oscillations associated with cycles of wetting and drying at the surface of the fluctuating water table correlate with increased carbon, sulfur, and nitrogen turn over. We found significant vertical stratification of DOM molecular composition and excitation-emission matrix parallel factor analysis components within the peat column. In particular, the intermediate depth zone ( 50 cm) was identified as a zone where maximum decomposition and turnover is taking place. Surface DOM was dominated by inputs from surface vegetation. The intermediate depth zone was an area of high organic matter reactivity and increased microbial activity with diagenetic formation of many unique compounds, among them polycyclic aromatic compounds that contain both nitrogen and sulfur heteroatoms. These compounds have been previously observed in coal-derived compounds and were assumed to be responsible for coal's biological activity. Biological processes triggered by redox oscillations taking place at the intermediate depth zone of the peat profile at the S1 bog are assumed to be responsible for the formation of these heteroatomic PACs in this system. Alternatively, these compounds could stem from black carbon and nitrogen derived from fires that have occurred at the site in the past. Surface and deep DOM exhibited more similar characteristics, compared to the intermediate depth zone, with the deep layer exhibiting greater input of microbially degraded organic matter than the surface suggesting that the entire peat profile consists of similar parent material at different degrees of decomposition and that lateral and vertical advection of pore water from the surface to the deeper horizons is responsible for such similarities. Our findings suggest that molecular composition of DOM in peatland pore water is dynamic and is a function of ecosystem activity, water table, redox oscillation, and pore water advection.

Exercise mitigates the stunting effect of cold temperature on limb elongation in mice by increasing solute delivery to the growth plate

PubMed Central

Williams, Rebecca M.; Farnum, Cornelia E.

2010-01-01

Ambient temperature and physical activity modulate bone elongation in mammals, but mechanisms underlying this plasticity are a century-old enigma. Longitudinal bone growth occurs in cartilaginous plates, which receive nutritional support via delivery of solutes from the vasculature. We tested the hypothesis that chronic exercise and warm temperature promote bone lengthening by increasing solute delivery to the growth plate, measured in real time using in vivo multiphoton microscopy. We housed 68 weanling female mice at cold (16°C) or warm (25°C) temperatures and allowed some groups voluntary access to a running wheel. We show that exercise mitigates the stunting effect of cold temperature on limb elongation after 11 days of wheel running. All runners had significantly lengthened limbs, regardless of temperature, while nonrunning mice had shorter limbs that correlated with housing temperature. Tail length was impacted only by temperature, indicating that the exercise effect was localized to limb bones and was not a systemic endocrine reaction. In vivo multiphoton imaging of fluoresceinated tracers revealed enhanced solute delivery to tibial growth plates in wheel-running mice, measured under anesthesia at rest. There was a minimal effect of rearing temperature on solute delivery when measured at an intermediate room temperature (20°C), suggesting that a lasting increase in solute delivery is an important factor in exercise-mediated limb lengthening but may not play a role in temperature-mediated limb lengthening. These results are relevant to the study of skeletal evolution in mammals from varying environments and have the potential to fundamentally advance our understanding of bone elongation processes. PMID:20930127

Calcium dependence of rapid auxin action in maize roots

NASA Technical Reports Server (NTRS)

Hasenstein, K. H.; Evans, M. L.

1986-01-01

We investigated the interaction of Ca2+ and auxin on root elongation in seedlings of Zea mays L. The seedlings were raised either in the presence of Ca2+ (high calcium; HC = imbibed and raised in 10 millimolar CaCl2), in the absence of additional Ca2+ (intermediate calcium; IC = imbibed and raised in distilled H2O, calcium supply from seed only), or without additional Ca2+ and subsequently depleting them of Ca2+ (low calcium; LC = imbibed and raised in distilled H2O and subsequently treated with 1 millimolar ethyleneglycol-bis-[beta-aminoethylether]-N,N,N',N'-tetraacetic acid [EGTA]). Exposure of roots of either HC or IC seedlings to auxin concentrations from 0.1 to 10 micromolar resulted in strong inhibition of elongation. In roots of LC seedlings, on the other hand, auxin concentrations as high as 10 micromolar caused only slight inhibition of elongation. Adding 0.5 millimolar Ca2+ to LC roots in the presence of IAA allowed normal expression of the inhibitory action of the hormone. Inhibition of elongation in IC roots by indoleacetic acid was reversible upon treatment of the roots with 1 millimolar EGTA. The inhibitory action of auxin could then be re-established by supplying 0.5 millimolar Ca2+. The data indicate that Ca2+ may be necessary to the growth-regulating action of auxin. The significance of this finding is discussed with respect to the potential role of Ca2+ as a second messenger of auxin action and the relevance of this model to recent evidence for gravi-induced redistribution of Ca2+ and its role in establishing gravitropic curvature.

No evidence for a deglacial intermediate water Δ14C anomaly in the SW Atlantic

NASA Astrophysics Data System (ADS)

Sortor, R. N.; Lund, D. C.

2010-12-01

Reconstructions of Δ14C from the eastern tropical Pacific show that severe depletions in 14C occurred at intermediate depths during the last deglaciation (Marchitto et al. 2007; Stott et al. 2009). Marchitto et al. (2007) suggested that old radiocarbon from an isolated abyssal reservoir was injected via the Southern Ocean, and that this anomaly was then carried by Antarctic Intermediate Water (AAIW) to the tropical Pacific. However, a core from the southeastern Pacific Ocean near Chile, which is in the direct path of modern-day AAIW, does not exhibit the excursion and therefore casts doubts upon the AAIW mechanism (De Pol-Holz et al. 2010). Here we evaluate whether or not a deglacial 14C anomaly similar to that in the eastern tropical Pacific occurred at intermediate depths in the South Atlantic. We reconstructed Δ14C using planktonic and benthic foraminifera from core KNR159-5-36GGC on the Brazil Margin (27○31’S and 46○28’W, 1268 m depth). In the modern ocean, the hydrography near this core site is heavily influenced by AAIW (Oppo & Horowitz, 2000). Benthic Δ14C values were determined using raw benthic 14C ages and calendar-calibrated planktonic ages. The deglacial benthic Δ14C trend at this site is similar to the atmospheric Δ14C trend, and is consistent with U/Th-dated corals from intermediate depths on the Brazil Margin (Mangini et al. 2010). The amplitude and timing of Δ14C changes in the foraminiferal and coral records are especially congruous during the Mystery Interval. We find no evidence in the southwestern Atlantic of a ~300‰ decrease in intermediate water Δ14C beginning at 18 kyr BP. Changes in reservoir age of ~1000 years are required to create a Baja-like Δ14C anomaly off Brazil, an implausible increase for a subtropical gyre location. Furthermore, the resulting sedimentation rates would be up to ~145 cm/kyr during the deglaciation, an order of magnitude higher than the average sedimentation rate for 36GGC. When our results are paired with those from the South Pacific, it appears AAIW was not the vehicle that carried the 14C anomaly to lower latitudes, and therefore other hypotheses to explain the eastern tropical Pacific data are required. References Marchitto, T., Lehman, S., Ortiz, J., Fluckiger, J. & van Geen, A. Marine radiocarbon evidence for the mechanism of deglacial atmospheric CO2 rise. Science 316, 1456-1459 (2007). Stott, L., Southon, J., Timmermann, A. & Koutavas, A. Radiocarbon age anomaly at intermediate depth in the Pacific Ocean during the last deglaciation. Paleoceanography 24, PA2223 (2009). Pol-Holz, R.D., Keigwin, L., Southon, J., Hebbeln, D. & Mohtadi, M. No signature of abyssal carbon in intermediate waters off Chile during deglaciation. Nature Geosci. 3, 192-195 (2010). Oppo, D.W. & Horowitz, M. Glacial deep water geometry: South Atlantic benthic foraminiferal Cd/Ca and delta C-13 evidence. Paleoceanography 15, 147-160 (2000). Mangini, A., Godoy, J.M., Godoy, M.L., Kowsmann, R., Santos, G.M., Ruckelshausen, M., Schroeder-Ritzrau, A. & Wacker, L. Deep Sea corals off Brazil verify a poorly ventilated Southern Pacific Ocean during H2, H1 and the Younger Dryas. Earth Planet. Sci. Lett. 293, 269-276 (2010).

Miscoding-induced stalling of substrate translocation on the bacterial ribosome.

PubMed

Alejo, Jose L; Blanchard, Scott C

2017-10-10

Directional transit of the ribosome along the messenger RNA (mRNA) template is a key determinant of the rate and processivity of protein synthesis. Imaging of the multistep translocation mechanism using single-molecule FRET has led to the hypothesis that substrate movements relative to the ribosome resolve through relatively long-lived late intermediates wherein peptidyl-tRNA enters the P site of the small ribosomal subunit via reversible, swivel-like motions of the small subunit head domain within the elongation factor G (GDP)-bound ribosome complex. Consistent with translocation being rate-limited by recognition and productive engagement of peptidyl-tRNA within the P site, we now show that base-pairing mismatches between the peptidyl-tRNA anticodon and the mRNA codon dramatically delay this rate-limiting, intramolecular process. This unexpected relationship between aminoacyl-tRNA decoding and translocation suggests that miscoding antibiotics may impact protein synthesis by impairing the recognition of peptidyl-tRNA in the small subunit P site during EF-G-catalyzed translocation. Strikingly, we show that elongation factor P (EF-P), traditionally known to alleviate ribosome stalling at polyproline motifs, can efficiently rescue translocation defects arising from miscoding. These findings help reveal the nature and origin of the rate-limiting steps in substrate translocation on the bacterial ribosome and indicate that EF-P can aid in resuming translation elongation stalled by miscoding errors.

Miscoding-induced stalling of substrate translocation on the bacterial ribosome

PubMed Central

Alejo, Jose L.; Blanchard, Scott C.

2017-01-01

Directional transit of the ribosome along the messenger RNA (mRNA) template is a key determinant of the rate and processivity of protein synthesis. Imaging of the multistep translocation mechanism using single-molecule FRET has led to the hypothesis that substrate movements relative to the ribosome resolve through relatively long-lived late intermediates wherein peptidyl-tRNA enters the P site of the small ribosomal subunit via reversible, swivel-like motions of the small subunit head domain within the elongation factor G (GDP)-bound ribosome complex. Consistent with translocation being rate-limited by recognition and productive engagement of peptidyl-tRNA within the P site, we now show that base-pairing mismatches between the peptidyl-tRNA anticodon and the mRNA codon dramatically delay this rate-limiting, intramolecular process. This unexpected relationship between aminoacyl-tRNA decoding and translocation suggests that miscoding antibiotics may impact protein synthesis by impairing the recognition of peptidyl-tRNA in the small subunit P site during EF-G–catalyzed translocation. Strikingly, we show that elongation factor P (EF-P), traditionally known to alleviate ribosome stalling at polyproline motifs, can efficiently rescue translocation defects arising from miscoding. These findings help reveal the nature and origin of the rate-limiting steps in substrate translocation on the bacterial ribosome and indicate that EF-P can aid in resuming translation elongation stalled by miscoding errors. PMID:28973849

Stochastic strong ground motion simulations for the intermediate-depth earthquakes of the south Aegean subduction zone

NASA Astrophysics Data System (ADS)

Kkallas, Harris; Papazachos, Konstantinos; Boore, David; Margaris, Vasilis

2015-04-01

We have employed the stochastic finite-fault modelling approach of Motazedian and Atkinson (2005), as described by Boore (2009), for the simulation of Fourier spectra of the Intermediate-depth earthquakes of the south Aegean subduction zone. The stochastic finite-fault method is a practical tool for simulating ground motions of future earthquakes which requires region-specific source, path and site characterizations as input model parameters. For this reason we have used data from both acceleration-sensor and broadband velocity-sensor instruments from intermediate-depth earthquakes with magnitude of M 4.5-6.7 that occurred in the south Aegean subduction zone. Source mechanisms for intermediate-depth events of north Aegean subduction zone are either collected from published information or are constrained using the main faulting types from Kkallas et al. (2013). The attenuation parameters for simulations were adopted from Skarladoudis et al. (2013) and are based on regression analysis of a response spectra database. The site amplification functions for each soil class were adopted from Klimis et al., (1999), while the kappa values were constrained from the analysis of the EGELADOS network data from Ventouzi et al., (2013). The investigation of stress-drop values was based on simulations performed with the EXSIM code for several ranges of stress drop values and by comparing the results with the available Fourier spectra of intermediate-depth earthquakes. Significant differences regarding the strong-motion duration, which is determined from Husid plots (Husid, 1969), have been identified between the for-arc and along-arc stations due to the effect of the low-velocity/low-Q mantle wedge on the seismic wave propagation. In order to estimate appropriate values for the duration of P-waves, we have automatically picked P-S durations on the available seismograms. For the S-wave durations we have used the part of the seismograms starting from the S-arrivals and ending at the 95%-energy limit of the Husid plots. After appropriate calibration of all parameters involved in the simulations we generated separate stochastic waveforms for both P- and S-waves, and produce the final synthetics by appropriate merging of the two stochastic waveforms. This work has been partly supported by the 3D-SEGMENTS project #1337 funded by EC European Social Fund and the Operational Programme "Education and Lifelong Learning" of the ARISTEIA-I call of the Greek Secretariat of Research and Technology.

Paleoceanography/climate and taphonomy at intermediate water depth in the Subtropical Western North Pacific Ocean over the last 1 Ma from IODP Exp 350 Sites U1436C and U1437B, Izu arc area.

NASA Astrophysics Data System (ADS)

Vautravers, Maryline

2015-04-01

IODP Expedition 350 Site U1436C lies in the western part of the Izu fore arc basin, ~60 km east of the arc front volcano Aogashima, at 1776 m water depth. This site is a technical hole (only a 150 m long record) for a potential future deep drilling by Chikyu. Site U1437 is located in the Izu rear arc, ~90 km west of the arc front volcanoes Myojinsho and Myojin Knoll, at 2117 m water depth. At this site in order to study the evolution of the IZU rear arc crust we recovered a 1800 meter long sequence of mud and volcaniclastic sediments. These sites provide a rich and well-preserved record of volcanic eruptions within the area of the Izu Bonin-Arc. However, the material recovered, mostly mud with ash containing generally abundant planktonic foraminifera, can support additional paleoceanographic goals in an area affected by the Kuroshio Current. Also, the hydrographic divide created by the Izu rise provides a rare opportunity to gain some insight into the operation of the global intermediate circulation. The Antarctic Intermediate Water Mass is more influential at the depth of U1437B in the West and the North Pacific Intermediate Water at Site U1436C to the East. We analyzed 460 samples recovered at Sites U1436C and U1437B for a quantitative planktonic foraminifer study, and also for carbonate preservation indices, including: shell weight, percent planktonic foraminifera fragments planktonic foraminifer concentrations, various faunal proxies, and benthic/planktonic ratio. We measured the stable isotopes for a similar number of samples using the thermocline dwelling Neogloboquadrina dutertrei. The dataset presented here covers the last 1 Ma at Site U1437B and 0.9 Ma at Site U1436C. The age models for the two sites are largely established through stable isotope stratigraphy (this study). On their respective age models we evidence based on polar/subpolar versus subtropical faunal assemblages changes qualitative surface water temperature variations recording the changing influences in the Kuroshio/Oyashio currents at orbital time scales over the last 1 Ma. However, the 2 main findings are i.) that of the intense and pervasive carbonate dissolution at such an intermediate water depth, especially during interglacials, and in particular at site U1436C, and ii.) the good and improving carbonate preservation at Site U1437B during glacials, particularly in the upper part of the record.

Teleseismic P wave tomography of South Island, New Zealand upper mantle: Evidence of subduction of Pacific lithosphere since 45 Ma

NASA Astrophysics Data System (ADS)

Zietlow, Daniel W.; Molnar, Peter H.; Sheehan, Anne F.

2016-06-01

A P wave speed tomogram produced from teleseismic travel time measurements made on and offshore the South Island of New Zealand shows a nearly vertical zone with wave speeds that are 4.5% higher than the background average reaching to depths of approximately 450 km under the northwestern region of the island. This structure is consistent with oblique west-southwest subduction of Pacific lithosphere since about 45 Ma, when subduction beneath the region began. The high-speed zone reaches about 200-300 km below the depths of the deepest intermediate-depth earthquakes (subcrustal to ~200 km) and therefore suggests that ~200-300 km of slab below them is required to produce sufficient weight to induce the intermediate-depth seismicity. In the southwestern South Island, high P wave speeds indicate subduction of the Australian plate at the Puysegur Trench to approximately 200 km depth. A band with speeds ~2-3.5% lower than the background average is found along the east coast of the South Island to depths of ~150-200 km and underlies Miocene or younger volcanism; these low speeds are consistent with thinned lithosphere. A core of high speeds under the Southern Alps associated with a convergent margin and mountain building imaged in previous investigations is not well resolved in this study. This could suggest that such high speeds are limited in both width and depth and not resolvable by our data.

Quantification of change in vocal fold tissue stiffness relative to depth of artificial damage.

PubMed

Rohlfs, Anna-Katharina; Schmolke, Sebastian; Clauditz, Till; Hess, Markus; Müller, Frank; Püschel, Klaus; Roemer, Frank W; Schumacher, Udo; Goodyer, Eric

2017-10-01

To quantify changes in the biomechanical properties of human excised vocal folds with defined artificial damage. The linear skin rheometer (LSR) was used to obtain a series of rheological measurements of shear modulus from the surface of 30 human cadaver vocal folds. The tissue samples were initially measured in a native condition and then following varying intensities of thermal damage. Histological examination of each vocal fold was used to determine the depth of artificial alteration. The measured changes in stiffness were correlated with the depth of cell damage. For vocal folds in a pre-damage state the shear modulus values ranged from 537 Pa to 1,651 Pa (female) and from 583 Pa to 1,193 Pa (male). With increasing depth of damage from the intermediate layer of the lamina propria (LP), tissue stiffness increased consistently (compared with native values) following application of thermal damage to the vocal folds. The measurement showed an increase of tissue stiffness when the depth of tissue damage was extending from the intermediate LP layer downwards. Changes in the elastic characteristics of human vocal fold tissue following damage at defined depths were demonstrated in an in vitro experiment. In future, reproducible in vivo measurements of elastic vocal fold tissue alterations may enable phonosurgeons to infer the extent of subepithelial damage from changes in surface elasticity.

Precise Relative Earthquake Depth Determination Using Array Processing Techniques

NASA Astrophysics Data System (ADS)

Florez, M. A.; Prieto, G. A.

2014-12-01

The mechanism for intermediate depth and deep earthquakes is still under debate. The temperatures and pressures are above the point where ordinary fractures ought to occur. Key to constraining this mechanism is the precise determination of hypocentral depth. It is well known that using depth phases allows for significant improvement in event depth determination, however routinely and systematically picking such phases for teleseismic or regional arrivals is problematic due to poor signal-to-noise ratios around the pP and sP phases. To overcome this limitation we have taken advantage of the additional information carried by seismic arrays. We have used beamforming and velocity spectral analysis techniques to precise measure pP-P and sP-P differential travel times. These techniques are further extended to achieve subsample accuracy and to allow for events where the signal-to-noise ratio is close to or even less than 1.0. The individual estimates obtained at different subarrays for a pair of earthquakes can be combined using a double-difference technique in order to precisely map seismicity in regions where it is tightly clustered. We illustrate these methods using data from the recent M 7.9 Alaska earthquake and its aftershocks, as well as data from the Bucaramanga nest in northern South America, arguably the densest and most active intermediate-depth earthquake nest in the world.

Through-Focus Vision Performance and Light Disturbances of 3 New Intraocular Lenses for Presbyopia Correction

PubMed Central

Escandón-García, Santiago; Ribeiro, Filomena J.; McAlinden, Colm

2018-01-01

Purpose To compare the through-focus visual performance in a clinical population of pseudophakic patients implanted with two new trifocal intraocular lenses (IOLs) and one extended depth of focus IOL. Methods Prospective, nonrandomized, examiner-masked case series. Twenty-three patients received the FineVision® and seven patients received the PanOptix™ trifocal IOLs. Fifteen patients received the Symfony extended depth of focus IOL. Mean age of patients was 63 ± 8 years. Through-focus visual acuity was measured from –3.00 to +1.00 D vergences. Contrast sensitivity was measured with and without a source of glare. Light disturbances were evaluated with the Light Distortion Analyzer. Results Though-focus evaluation showed that trifocal IOLs performed significantly better at near distance (33 and 40 cm), and extended depth of focus performed significantly better at intermediate distance (1.0 m). Contrast sensitivity function with glare and dysphotopsia was similar between the three IOLs and subjective response to questionnaire showed a significantly higher score (worse performance) for the extended depth of focus IOL compared to both trifocal IOLs in the bothersome subscale (p < 0.05). Conclusions Trifocal IOLs grant better performance at near distance while extended depth of focus IOL performs better at intermediate distance. Objective dysphotopsia measured with the Light Distortion Analyzer is not reduced in extended depth of focus IOL compared to trifocal IOLs. PMID:29651343

Guidance for Subaqueous Dredged Material Capping.

DTIC Science & Technology

1998-06-01

from Ambrose Channel , over the contaminated sediments. At least two intermediate sur- veys and additional capping were required before capping was...organisms to a given bioturbation depth; reducing contami- nant flux rates to achieve specific sediment, pore water, or water column target...bathymetry, bottom slopes, cur- rents, water depths, water column density stratification, erosion/accretion trends, proximity to navigation channels

Analyzing the Effect of Spinning Process Variables on Draw Frame Blended Cotton Mélange Yarn Quality

NASA Astrophysics Data System (ADS)

Ray, Suchibrata; Ghosh, Anindya; Banerjee, Debamalya

2018-06-01

An investigation has been made to study the effect of important spinning process variables namely shade depth, ring frame spindle speed and yarn twist multiplier (TM) on various yarn quality parameters like unevenness, strength, imperfection, elongation at break and hairiness index of draw frame blended cotton mélange yarn. Three factors Box and Behnken design of experiment has been used to conduct the study. The quadratic regression model is used to device the statistical inferences about sensitivity of the yarn quality parameters to the different process variables. The response surfaces are constructed for depicting the geometric representation of yarn quality parameters plotted as a function of process variables. Analysis of the results show that yarn strength of draw frame blended cotton mélange yarn is significantly affected by shade depth and TM. Yarn unevenness is affected by shade depth and ring frame spindle speed. Yarn imperfection level is mainly influenced by the shade depth and spindle speed. The shade depth and yarn TM have shown significant impact on yarn hairiness index.

Analyzing the Effect of Spinning Process Variables on Draw Frame Blended Cotton Mélange Yarn Quality

NASA Astrophysics Data System (ADS)

Ray, Suchibrata; Ghosh, Anindya; Banerjee, Debamalya

2017-12-01

An investigation has been made to study the effect of important spinning process variables namely shade depth, ring frame spindle speed and yarn twist multiplier (TM) on various yarn quality parameters like unevenness, strength, imperfection, elongation at break and hairiness index of draw frame blended cotton mélange yarn. Three factors Box and Behnken design of experiment has been used to conduct the study. The quadratic regression model is used to device the statistical inferences about sensitivity of the yarn quality parameters to the different process variables. The response surfaces are constructed for depicting the geometric representation of yarn quality parameters plotted as a function of process variables. Analysis of the results show that yarn strength of draw frame blended cotton mélange yarn is significantly affected by shade depth and TM. Yarn unevenness is affected by shade depth and ring frame spindle speed. Yarn imperfection level is mainly influenced by the shade depth and spindle speed. The shade depth and yarn TM have shown significant impact on yarn hairiness index.

In vivo biometry in the mouse eye with low coherence interferometry.

PubMed

Schmucker, Christine; Schaeffel, Frank

2004-01-01

A major drawback of the mouse model of myopia is that the ocular dimensions cannot be measured in vivo, and that histological techniques post-mortem suffer from limited resolution. We have tested the potential of a newly developed technique, optical low coherence interferometry (OLCI), adapted for short measurement distances by Meditec, Carl Zeiss, Jena, Germany (the "ACMaster"). Using this technique, ocular biometry was performed in mice with normal vision and after deprivation of form vision. Axial eye length, corneal thickness and anterior chamber depth were measured in 23 mice, aged 25-53 days, and standard deviations from repeated measurements in the same eyes, as well as intra-individual and inter-individual variability were determined in different age groups. The data were compared to those from a preceding study in which biometrical data were obtained from frozen sections [Vision Res. 44 (2004) 1857]. Refractions were measured by automated infrared photorefraction. Mice had either normal visual exposure or were monocularly deprived of form vision for 14 days. Using OLCI, axial length could be determined with an average standard deviation of 8.0 +/- 2.9 microm, corneal thickness with 3.5 +/- 2.1 microm, and anterior chamber depth with 10.6 +/- 12.3 microm. Neither axial length, nor corneal thickness, nor anterior chamber depth were significantly different in left and right eyes of individual mice that had normal visual experience (mean absolute difference between axial lengths: 17 +/- 18 microm, between corneal thickness 5.1 +/- 4.8 microm, and between anterior chamber depths 16.7 +/- 14.8 microm). Compared to the variability that was previously found in frozen sections, the variability of axial length measurements with OLCI was 2.7 times less. After two weeks of form deprivation, OLCI revealed a significant axial elongation in the occluded eyes, compared to the contralateral fellow eyes (+38 +/- 36 microm or 1.16%, p = 0.045, n = 7, paired t-test). In this sample, no accompanying myopic shift was observed in the occluded eyes but this observation is not unexpected given the inherently variable responses of mouse eye growth to visual deprivation. OLCI had sufficient resolution in living mice to detect axial length changes in vivo that were equivalent to a dioptric change of 2 D. Using this technique, it was confirmed that mouse eyes respond to form deprivation by axial elongation, similar to the eyes of other animal models. The lack of a myopic shift in this sample, despite the axial elongation, demonstrates that biometric data are particularly important when the mouse eye is used as a model to study myopia.

Tensile Property of ANSI 304 Stainless Steel Weldments Subjected to Cavitation Erosion Based on Treatment of Laser Shock Processing.

PubMed

Zhang, Lei; Liu, Yue-Hua; Luo, Kai-Yu; Zhang, Yong-Kang; Zhao, Yong; Huang, Jian-Yun; Wu, Xu-Dong; Zhou, Chuang

2018-05-16

Tensile property was one important index of mechanical properties of ANSI 304 stainless steel laser weldments subjected to cavitation erosion (CE). Laser shock processing (LSP) was utilized to strengthen the CE resistance, and the tensile property and fracture morphology were analyzed through three replicated experiment times. Results showed tensile process of treated weldments was composed of elastic deformation, plastic deformation, and fracture. The elastic limit, elastic modulus, elongation, area reduction, and ultimate tensile strength of tensile sample after CE were higher in view of LSP. In the fracture surface, the fiber zone, radiation zone and shear lip zone were generated, and those were more obvious through LSP. The number and size of pores in the fracture surface were smaller, and the fracture surface was smoother and more uniform. The dimples were elongated along the unified direction due to effects of LSP, and the elongated direction was in agreement with the crack propagation direction. Their distribution and shape were uniform with deeper depth. It could be reflected that the tensile property was improved by LSP and the CE resistance was also enhanced.

[Penile augmentation and elongation using autologous dermal-fat strip grafting].

PubMed

Yang, Zhe; Li, Yang-qun; Tang, Yong; Chen, Wen; Li, Qiang; Zhou, Chuan-de; Zhao, Mu-xin; Hu, Chun-mei

2012-05-01

To investigate the effect of autologous dermal-fat strip grafting in penile augmentation and elongation. From May 2004 to December 2010, 24 patients underwent penile enhancement with free dermal-fat strip grafting. Through suprapubic incision, the superior suspensory ligament and part deep suspensory ligament are cutted off to lengthen the penis. The resulted dead space is filled with the autologous dermal-fat strip (6.0-9.5 cm in length, 1.2-1.5 cm in width and 0.6-0.8 cm in depth) to enhance the penis. Primary healing was achieved in 23 cases. Incisional fat liquefaction happened in one case which healed after dressing change. The penile appearance was satisfactory both at rest or erection. The penile length and circumference increased by 2.5-4.8 cm (average, 3.2 cm) and 1.8-3.0 cm (average, 2.4 cm), respectively. 18 patients were followed up for 3 months to 5 years. All the patients were satisfactory on the cosmetic and functional results. No complication happened. It is safe and effective for penile augmention and elongation with autologous dermal-fat strip grafting and disconnection of penile suspensory ligament.

Application of spatial time domain reflectometry measurements in heterogeneous, rocky substrates

NASA Astrophysics Data System (ADS)

Gonzales, C.; Scheuermann, A.; Arnold, S.; Baumgartl, T.

2016-10-01

Measurement of soil moisture across depths using sensors is currently limited to point measurements or remote sensing technologies. Point measurements have limitations on spatial resolution, while the latter, although covering large areas may not represent real-time hydrologic processes, especially near the surface. The objective of the study was to determine the efficacy of elongated soil moisture probes—spatial time domain reflectometry (STDR)—and to describe transient soil moisture dynamics of unconsolidated mine waste rock materials. The probes were calibrated under controlled conditions in the glasshouse. Transient soil moisture content was measured using the gravimetric method and STDR. Volumetric soil moisture content derived from weighing was compared with values generated from a numerical model simulating the drying process. A calibration function was generated and applied to STDR field data sets. The use of elongated probes effectively assists in the real-time determination of the spatial distribution of soil moisture. It also allows hydrologic processes to be uncovered in the unsaturated zone, especially for water balance calculations that are commonly based on point measurements. The elongated soil moisture probes can potentially describe transient substrate processes and delineate heterogeneity in terms of the pore size distribution in a seasonally wet but otherwise arid environment.

Tensile Property of ANSI 304 Stainless Steel Weldments Subjected to Cavitation Erosion Based on Treatment of Laser Shock Processing

PubMed Central

Zhang, Lei; Liu, Yue-Hua; Luo, Kai-Yu; Zhang, Yong-Kang; Zhao, Yong; Huang, Jian-Yun; Wu, Xu-Dong; Zhou, Chuang

2018-01-01

Tensile property was one important index of mechanical properties of ANSI 304 stainless steel laser weldments subjected to cavitation erosion (CE). Laser shock processing (LSP) was utilized to strengthen the CE resistance, and the tensile property and fracture morphology were analyzed through three replicated experiment times. Results showed tensile process of treated weldments was composed of elastic deformation, plastic deformation, and fracture. The elastic limit, elastic modulus, elongation, area reduction, and ultimate tensile strength of tensile sample after CE were higher in view of LSP. In the fracture surface, the fiber zone, radiation zone and shear lip zone were generated, and those were more obvious through LSP. The number and size of pores in the fracture surface were smaller, and the fracture surface was smoother and more uniform. The dimples were elongated along the unified direction due to effects of LSP, and the elongated direction was in agreement with the crack propagation direction. Their distribution and shape were uniform with deeper depth. It could be reflected that the tensile property was improved by LSP and the CE resistance was also enhanced. PMID:29772661

Compressive sensing of frequency-dependent seismic radiation from subduction zone megathrust ruptures

PubMed Central

Yao, Huajian; Shearer, Peter M.; Gerstoft, Peter

2013-01-01

Megathrust earthquakes rupture a broad zone of the subducting plate interface in both along-strike and along-dip directions. The along-dip rupture characteristics of megathrust events, e.g., their slip and energy radiation distribution, reflect depth-varying frictional properties of the slab interface. Here, we report high-resolution frequency-dependent seismic radiation of the four largest megathrust earthquakes in the past 10 y using a compressive-sensing (sparse source recovery) technique, resolving generally low-frequency radiation closer to the trench at shallower depths and high-frequency radiation farther from the trench at greater depths. Together with coseismic slip models and early aftershock locations, our results suggest depth-varying frictional properties at the subducting plate interfaces. The shallower portion of the slab interface (above ∼15 km) is frictionally stable or conditionally stable and is the source region for tsunami earthquakes with large coseismic slip, deficient high-frequency radiation, and few early aftershocks. The slab interface at intermediate depths (∼15–35 km) is the main unstable seismogenic zone for the nucleation of megathrust quakes, typically with large coseismic slip, abundant early aftershocks, and intermediate- to high-frequency radiation. The deeper portion of the slab interface (∼35–45 km) is seismically unstable, however with small coseismic slip, dominant high-frequency radiation, and relatively fewer aftershocks.

Probing the Natural World, Level III, Teacher's Edition: Well-Being. Intermediate Science Curriculum Study.

ERIC Educational Resources Information Center

Bonar, John R., Ed.; Hathway, James A., Ed.

This is the teacher's edition of one of the eight units of the Intermediate Science Curriculum Study (ISCS) for level III students (grade 9). This unit focuses on hazards to the body from drug use. Activities are given that relate to the topic. Optional excursions are suggested for students who wish to study an area in greater depth. An…

The Role of Syllables in Intermediate-Depth Stress-Timed Languages: Masked Priming Evidence in European Portuguese

ERIC Educational Resources Information Center

Campos, Ana Duarte; Mendes Oliveira, Helena; Soares, Ana Paula

2018-01-01

The role of syllables as a sublexical unit in visual word recognition and reading is well established in deep and shallow syllable-timed languages such as French and Spanish, respectively. However, its role in intermediate stress-timed languages remains unclear. This paper aims to overcome this gap by studying for the first time the role of…

Abrupt Deglacial Changes in Subarctic Pacific Ventilation: Intermediate and Deep Water Ventilation, Oxygen Fluctuations, and the relation to carbon cycle dynamics

NASA Astrophysics Data System (ADS)

Lembke-Jene, L.; Tiedemann, R.; Gong, X.; Max, L.; Zou, J.; Shi, X.; Lohmann, G.

2016-12-01

The modern subarctic Pacific halocline prevents the formation of deepwater masses andonly mid-depth waters are ventilated by North Pacific Intermediate Water (NPIW). During the last glacial, isolation of the deep North Pacific ids thought to have been more pronounced, combined with a better ventilated and expanded NPIW. This glacial deep to intermediate separation, together with upper ocean stratification, has principal implications for the deep ocean storage of carbon, as well as the mid-depth provision of nutrients by NPIW to the lower-latitude thermocline and the Pacific subarctic gyre. To date, conflicting evidence persists how the North Pacific biological and physical carbon pump reorganized during millennial-scale glacial and deglacial changes over the past 50 ka, limiting our understanding of carbon pool dynamics between Pacific ocean and the atmosphere. We present proxydata and paleoclimate modelling evidence for rapid intermediate and deep ocean nutrient and ventilation changes based on a sediment core collection with good temporal and spatial resolution from the Okhotsk Sea, Bering Sea, and the open subarctic North Pacific. High sedimentation rates (20-200 cm/ka) enable us to decipher rapid climatic changes on millennial time scales through MIS 2-3 and with a higher, up to inter-decadal, resolution during the last glacial termination. Paired AMS radiocarbon planktic-benthic ages help us to constrain water mass age changes, while multi-species foraminiferal stable isotope and redox-sensitive elemental time series provide information on past oxygenation and nutrient dynamics. We found evidence for a weaker chemical separation between intermediate and deep water during the glacial than previously thought, with rapid alternations between major NPIW ventilation areas in marginal seas, in particular during Heinrich stadials and the termination. We provide new information about the deglacial mid-depth subarctic Pacific de-oxygenation timing, extent and forcing. Finally, we discuss evidence for the spatial characteristics and causes of observed physical and chemical intermediate and deep ocean changes, based on results from a suite of paleoclimate modelling experiments using the COSMOS Earth System Model, and the high-resolution (eddy-permitting) sea ice - ocean model AWI-FESOM.

Slab-pull and slab-push earthquakes in the Mexican, Chilean and Peruvian subduction zones

NASA Astrophysics Data System (ADS)

Lemoine, A.; Madariaga, R.; Campos, J.

2002-09-01

We studied intermediate depth earthquakes in the Chile, Peru and Mexican subduction zones, paying special attention to slab-push (down-dip compression) and slab-pull (down-dip extension) mechanisms. Although, slab-push events are relatively rare in comparison with slab-pull earthquakes, quite a few have occurred recently. In Peru, a couple slab-push events occurred in 1991 and one slab-pull together with several slab-push events occurred in 1970 near Chimbote. In Mexico, several slab-push and slab-pull events occurred near Zihuatanejo below the fault zone of the 1985 Michoacan event. In central Chile, a large M=7.1 slab-push event occurred in October 1997 that followed a series of four shallow Mw>6 thrust earthquakes on the plate interface. We used teleseismic body waveform inversion of a number of Mw>5.9 slab-push and slab-pull earthquakes in order to obtain accurate mechanisms, depths and source time functions. We used a master event method in order to get relative locations. We discussed the occurrence of the relatively rare slab-push events in the three subduction zones. Were they due to the geometry of the subduction that produces flexure inside the downgoing slab, or were they produced by stress transfer during the earthquake cycle? Stress transfer can not explain the occurence of several compressional and extensional intraplate intermediate depth earthquakes in central Chile, central Mexico and central Peru. It seemed that the heterogeneity of the stress field produced by complex slab geometry has an important influence on intraplate intermediate depth earthquakes.

Slab rupture and delamination under the Betics and Rif constrained from receiver functions

NASA Astrophysics Data System (ADS)

Mancilla, Flor de Lis; Booth-Rea, Guillermo; Stich, Daniel; Pérez-Peña, José Vicente; Morales, José; Azañón, José Miguel; Martin, Rosa; Giaconia, Flavio

2015-11-01

We map the lithospheric structure under the westernmost Mediterranean convergent setting interpreting P-receiver functions obtained from a dense seismic network. No orogenic root occurs under the eastern and great part of the central Betics. However, the subducted South Iberian continental lithosphere is found beneath the western Betics where the Iberian Moho reaches depths of approximately 65 km, dipping gently towards the SE. Meanwhile, at the Rif, strong crustal and lithospheric thickness contrasts occur across the Nekor NW-SE sinistral fault that overlies the region of present slab tearing. East of the Nekor fault there is no orogenic root and the crust has been thinned to approximately 22 km, whilst to the west the crust reaches 55 km thickness and the Maghrebian continental lithosphere is attached to the lithospheric slab imaged by tomography under the Alboran basin. These data suggest that subduction rollback under the Alboran and Algerian basins, together with continental slab tearing or detachment producing edge delamination under the Betics and Rif have been the main tectonic mechanisms driving extension, magmatism and regional uplift in the westernmost Mediterranean since the Late Miocene until present. The surface expression of edge-delamination and slab tearing is marked by regional uplift, denudation of HP rocks in elongated core-complex type domes, late Miocene volcanism in the Eastern Betics and Rif, and by large NE-SW strike-slip transfer faults like the Alpujarras, Crevillente, Torcal or Nekor faults that accommodate strong gradients in crustal displacements. The Iberian slab is still attached to the oceanic slab imaged under the Alboran basin at the western Betics where intermediate depth seismicity, recent dextral strike-slip faulting and folding, could reflect slab tearing. Meanwhile, active faulting and differential GPS-measured displacements would mark slab tearing beneath the Rif coinciding with the trace of the sinistral Nekor fault.

Long-term patterns of benthic irradiance and kelp production in the central Beaufort sea reveal implications of warming for Arctic inner shelves

NASA Astrophysics Data System (ADS)

Bonsell, Christina; Dunton, Kenneth H.

2018-03-01

This study synthesizes a multidecadal dataset of annual growth of the Arctic endemic kelp Laminaria solidungula and corresponding measurements of in situ benthic irradiance from Stefansson Sound in the central Beaufort Sea. We incorporate long-term data on sea ice concentration (National Sea Ice Data Center) and wind (National Weather Service) to assess how ice extent and summer wind dynamics affect the benthic light environment and annual kelp production. We find evidence of significant changes in sea ice extent in Stefansson Sound, with an extension of the ice-free season by approximately 17 days since 1979. Although kelp elongation at 5-7 m depths varies significantly among sites and years (3.8-49.8 cm yr-1), there is no evidence for increased production with either earlier ice break-up or a longer summer ice-free period. This is explained by very low light transmittance to the benthos during the summer season (mean daily percent surface irradiance ± SD: 1.7 ± 3.6 to 4.5 ± 6.6, depending on depth, with light attenuation values ranging from 0.5 to 0.8 m-1), resulting in minimal potential for kelp production on most days. Additionally, on month-long timescales (35 days) in the ice-free summer, benthic light levels are negatively related to wind speed. The frequent, wind-driven resuspension of sediments following ice break-up significantly reduce light to the seabed, effectively nullifying the benefits of an increased ice-free season on annual kelp growth. Instead, benthic light and primary production may depend substantially on the 1-3 week period surrounding ice break-up when intermediate sea ice concentrations reduce wind-driven sediment resuspension. These results suggest that both benthic and water column primary production along the inner shelf of Arctic marginal seas may decrease, not increase, with reductions in sea ice extent.

Monitoring deep geodynamic processes within Vrancea intermediate-depth seismic zone by geodetic means

NASA Astrophysics Data System (ADS)

Besutiu, Lucian; Zlagnean, Luminita

2015-04-01

Background Located in the bending zone of East Carpathians, the so-called Vrancea zone is one of the most active seismic regions in Europe. Despite many years of international research, its intermediate-depth seismicity within full intra-continental environment still represents a challenge of the 21st century. Infrastructure In the attempt to join the above-mentioned efforts, the Solid Earth Dynamics Department (SEDD) in the Institute of Geodynamics of the Romanian Academy has developed a special research infrastructure, mainly devoted to gravity and space geodesy observations. A geodetic network covering the epicentre area of the intermediate-depth earthquakes has been designed and implemented for monitoring deep geodynamic processes and their surface echoes. Within each base-station of the above-mentioned network, a still-reinforced concrete pillar allows for high accuracy repeated gravity and GPS determinations. Results Starting from some results of the previously run CERGOP and UNIGRACE European programmes, to which additional SEDD repeated field campaigns were added, an unusual geodynamic behaviour has been revealed in the area. 1) Crust deformation: unlike the overall uprising of East Carpathians, as a result of denudation followed by erosion, their SE bending zone, with Vrancea epicentre area exhibits a slight subsidence. 2) Gravity change: more than 200 microgals non-tidal gravity decrease over a 20 years time-span has been noticed within the subsiding area. Extended observations showed the gravity lowering as a nowadays continuing process. Interpretation This strange combination of topography subsidence and gravity lowering has been interpreted in terms of crust stretching in the Vrancea epicentre zone due to the gravity pull created by densification of the lower crust as a result of phase-transform processes taking place in the lithospheric compartment sunken into the upper mantle. The occurrence of crust earthquakes with vertical-extension focal mechanism exclusively in the Vrancea seismic zone support the assumption. Recent studies on the Vrancea echoes of 2013 Galati-Izvoarele quake swarm have also confirmed our hypotheses. Based on numerical modelling of the geodynamic process, an estimate of the stretching rate has been obtained, fully consistent with results inferred from studies on the seismic energy released by the Vrancea intermediate earthquakes. Concluding remarks Looking further, the sinking of the Vrancea lithosphere into the upper mantle (and consequent crust stretching, appropriately reflected in the non-tidal gravity change) appears as an ongoing geodynamic process, tightly connected to the intermediate-depth seismicity generated within the lithosphere penetrating the upper mantle by thermo-baric accommodation phenomena. Time series provided by repeated gravity observations conducted on the above-mentioned infrastructure for about ten years have clearly revealed: (i) the persistence of the gravity lowering, and (ii) some apparent connection between the rate of the gravity change, and the amount of seismic energy released by intermediate-depth earthquakes. Acknowledgements. The research has been partly performed through CYBERDYNE project, funded through the EU structural programme (contract #184/2010).

Multiple intermediates on the energy landscape of a 15-HEAT-repeat protein

PubMed Central

Tsytlonok, Maksym; Craig, Patricio O.; Sivertsson, Elin; Serquera, David; Perrett, Sarah; Best, Robert B.; Wolynes, Peter G.; Itzhaki, Laura S.

2014-01-01

Repeat proteins are a special class of modular, non-globular proteins composed of small structural motifs arrayed to form elongated architectures and stabilised solely by short-range contacts. We find a remarkable complexity in the unfolding of the large HEAT repeat protein PR65/A. In contrast to what has been seen for small repeat proteins in which unfolding propagates from one end, the HEAT array of PR65/A ruptures at multiple distant sites, leading to intermediate states with non-contiguous folded subdomains. Kinetic analysis allows us to define a network of intermediates and to delineate the pathways that connect them. There is a dominant sequence of unfolding, reflecting a non-uniform distribution of stability across the repeat array; however the unfolding of certain intermediates is competitive, leading to parallel pathways. Theoretical models accounting for the heterogeneous contact density in the folded structure are able to rationalize the variation in stability across the array. This variation in stability also suggests how folding may direct function in a large repeat protein: The stability distribution enables certain regions to present rigid motifs for molecular recognition while affording others flexibility to broaden the search area as in a fly-casting mechanism. Thus PR65/A uses the two ends of the repeat array to bind diverse partners and thereby coordinate the dephosphorylation of many different substrates and of multiple sites within hyperphosphorylated substrates. PMID:24120762

An examination of photoacclimatory responses of Zostera marina transplants along a depth gradient for transplant-site selection in a disturbed estuary

NASA Astrophysics Data System (ADS)

Li, Wen-Tao; Kim, Seung Hyeon; Kim, Jae Woo; Kim, Jong-Hyeob; Lee, Kun-Seop

2013-02-01

Growth and photosynthetic responses of Zostera marina transplants along a depth gradient were examined to determine appropriate transplanting areas for seagrass restoration. Seagrass Z. marina was once widely distributed in the Taehwa River estuary in southeastern Korea, but has disappeared since the 1960s due to port construction and large scale pollutant inputs from upstream industrial areas. Recently, water quality has been considerably improved as a result of effective sewage treatment, and the local government is attempting to restore Z. marina to the estuary. For seagrass restoration in this estuary, a pilot transplantation trial of Z. marina at three water depths (shallow: 0.5 m; intermediate: 1.5 m; deep: 2.5 m relative to MLLW) was conducted in November 2008. The transplant shoot density increased gradually at the intermediate and deep sites, whereas the transplants at the shallow site disappeared after 3 months. To find the optimal transplantation locations in this estuary, the growth and photosynthetic responses of the transplants along a depth gradient were examined for approximately 4 months following transplantation in March 2009. In the 2009 experimental transplantation trial, shoot density of transplants at the shallow site was significantly higher than those at the intermediate and deep sites during the first 3 months following transplantation, but rapidly decreased approximately 4 months after transplantation. The chlorophyll content, photosynthetic efficiency (α), and maximum quantum yield (Fv/Fm) of the transplants were significantly higher at the deep site than at the shallow site. Shoot size, biomass and leaf productivity were also significantly higher at the deep site than at the shallow site. Although underwater irradiance was significantly lower at the deep site than at the shallow site, transplants at the deep site were morphologically and physiologically acclimated to the low light. Transplants at the shallow site exhibited high mortality during the early period of transplantation perhaps due to high physical disturbances at the site, but transplants at the intermediate and deep sites showed higher growth through more efficient photosynthesis and morphological adaptation. Thus, the intermediate and deep sites (1.5-2.5 m relative to MLLW) appeared to be more appropriate seagrass transplantation sites in this estuary.

33 CFR 207.680 - Willamette River, Oreg.; use, administration, and navigation of canal and locks at Willamette...

Code of Federal Regulations, 2011 CFR

2011-07-01

... and Navigable Waters CORPS OF ENGINEERS, DEPARTMENT OF THE ARMY, DEPARTMENT OF DEFENSE NAVIGATION... through the locks. The controlling water depth over the intermediate miter sills throughout the locks is 6.5 feet. However, the depth on the sill of the upstream gate at low water is 7.5 feet and over the...

Ion Demagnetization in the Magnetopause Current Layer Observed by MMS

NASA Technical Reports Server (NTRS)

Wang, Shan; Chen, Li-Jen; Hesse, Michael; Gershman, Daniel J.; Dorelli, John; Giles, Barbara; Torbert, Roy B.; Pollock, Craig J.; Lavraud, Benoit; Strangeway, Robert;

Ion demagnetization in the magnetopause current layer observed by MMS

NASA Astrophysics Data System (ADS)

Wang, Shan; Chen, Li-Jen; Hesse, Michael; Gershman, Daniel J.; Dorelli, John; Giles, Barbara; Torbert, Roy B.; Pollock, Craig J.; Lavraud, Benoit; Strangeway, Robert; Ergun, Robert E.; Burch, Jim; Avanov, Levon; Moore, Thomas E.; Saito, Yoshifumi

2016-05-01

We report ion velocity distribution functions (VDFs) observed by Magnetospheric Multiscale Mission (MMS) and present evidence for demagnetized ion Speiser motion during magnetopause reconnection. The demagnetization is observed in the vicinity of the X line, as well as near the current sheet midplane about tens of ion skin depths (di) away from the X line. Close to the X line before the outflow is built up, the VDFs are elongated, and the elongated part of VDFs rotates from the out-of-plane current direction toward the outflow directions downstream from the X line. Farther downstream, demagnetized ions exhibit a characteristic half-ring structure in the VDFs, as a result of the mixture of ions that have experienced different amounts of cyclotron turning around the magnetic field normal to the current sheet. Signatures of acceleration by electric fields are more pronounced in the VDFs near the X line than downstream.

The nature of the sunspot phenomenon. III - Energy consumption and energy transport. IV - The intrinsic instability of the magnetic configuration

NASA Technical Reports Server (NTRS)

Parker, E. N.

1975-01-01

The basic relation is described between conversion of thermal energy into convective fluid motion and convective transport of thermal energy, and the equilibrium configuration of a sunspot's magnetic field is shown to be unstable to the hydromagnetic exchange instability. It is determined that heat transport necessarily accompanies convective driving of fluid motion and that the formation of cool sunspots requires convection extending coherently over several scale heights, a distance of at least 500 km. Several theoretical possibilities for sunspot stabilization are reviewed, and it is suggested that a suitable redistribution of cooling in the umbra may be the stabilization mechanism. It is believed that if cooling extends to a great depth in an elongated portion of a sunspot, the magnetic pressure on the boundary will be reduced, tending to reduce the elongation.

Refrigerated cryogenic envelope

DOEpatents

Loudon, John D.

1976-11-16

An elongated cryogenic envelope including an outer tube and an inner tube coaxially spaced within said inner tube so that the space therebetween forms a vacuum chamber for holding a vacuum. The inner and outer tubes are provided with means for expanding or contracting during thermal changes. A shield is located in the vacuum chamber intermediate the inner and outer tubes; and, a refrigeration tube for directing refrigeration to the shield is coiled about at least a portion of the inner tube within the vacuum chamber to permit the refrigeration tube to expand or contract along its length during thermal changes within said vacuum chamber.

Preliminary Drill Sites

DOE Data Explorer

Lane, Michael

2013-06-28

Preliminary locations for intermediate depth temperature gradient holes and/or resource confirmation wells based on compilation of geological, geophysical and geochemical data prior to carrying out the DOE-funded reflection seismic survey.

The intermediate-depth Tonga double-seismic zone and relationship to slab thermal structure

NASA Astrophysics Data System (ADS)

Wei, S. S.; Wiens, D.; Van Keken, P. E.; Adams, A. N.; Cai, C.

2015-12-01

We used data from the ocean bottom seismographs and island-based stations deployed in the Tonga-Fiji area from 2009 to 2010 to investigate the seismicity of the Tonga subducting slab. We relocated 785 events from the Reviewed ISC Bulletin with local array data, 379 newly detected intermediate-depth events, as well as 1976-2012 events with Global Centroid-Moment-Tensor (CMT) solutions. The events were relocated with both local and teleseismic P, pP, and S arrivals using a hypocentroidal decomposition relative location algorithm. The results show a double-seismic zone (DSZ) with a separation of about 30 km along the Tonga slab within a depth range of about 70 - 300 km. The upper plane is more seismically active and characterized by downdip compressional stress whereas the lower plane is characterized by downdip tensional stress, consistent with the slab unbending model. Accordingly, focal mechanisms of the earthquakes along the surface of the slab show downdip extension above the depth of 80 km, but turn to compression below it, coinciding with the change of the slab dip angle from 30˚ to 60˚ at the same depth. The lower limit of the DSZ beneath Tonga is significantly deeper than that in Japan and Mariana (about 200 km), implying the importance of thermal variations in controlling the DSZ. Since the Tonga slab, with the fastest subduction rate, is cooler than other slabs, thermally controlled processes such as dehydration embrittlement can occur at greater depths, resulting in a deeper depth extent of the DSZ.

Cotranslational structure acquisition of nascent polypeptides monitored by NMR spectroscopy.

PubMed

Eichmann, Cédric; Preissler, Steffen; Riek, Roland; Deuerling, Elke

2010-05-18

The folding of proteins in living cells may start during their synthesis when the polypeptides emerge gradually at the ribosomal exit tunnel. However, our current understanding of cotranslational folding processes at the atomic level is limited. We employed NMR spectroscopy to monitor the conformation of the SH3 domain from alpha-spectrin at sequential stages of elongation via in vivo ribosome-arrested (15)N,(13)C-labeled nascent polypeptides. These nascent chains exposed either the entire SH3 domain or C-terminally truncated segments thereof, thus providing snapshots of the translation process. We show that nascent SH3 polypeptides remain unstructured during elongation but fold into a compact, native-like beta-sheet assembly when the entire sequence information is available. Moreover, the ribosome neither imposes major conformational constraints nor significantly interacts with exposed unfolded nascent SH3 domain moieties. Our data provide evidence for a domainwise folding of the SH3 domain on ribosomes without significant population of folding intermediates. The domain follows a thermodynamically favorable pathway in which sequential folding units are stabilized, thus avoiding kinetic traps during the process of cotranslational folding.

Strengthening of Aluminum Alloy 2219 by Thermo-mechanical Treatment

NASA Astrophysics Data System (ADS)

Li, Xifeng; Lei, Kun; Song, Peng; Liu, Xinqin; Zhang, Fei; Li, Jianfei; Chen, Jun

2015-10-01

Strengthening of aluminum alloy 2219 by thermo-mechanical treatment has been compared with artificial aging. Three simple deformation modes including pre-stretching, compression, and rolling have been used in thermo-mechanical treatment. The tensile strength, elongation, fracture feature, and precipitated phase have been investigated. The results show that the strengthening effect of thermo-mechanical treatment is better than the one of artificial aging. Especially, the yield strength significantly increases with a small decrease of elongation. When the specimen is pre-stretched to 8.0%, the yield strength reaches 385.0 MPa and increases by 22.2% in comparison to the one obtained in aging condition. The maximum tensile strength of 472.4 MPa is achieved with 4.0% thickness reduction by compression. The fracture morphology reveals locally ductile and brittle failure mechanism, while the coarse second-phase particles distribute on the fracture surface. The intermediate phases θ″ or θ' orthogonally precipitate in the matrix after thermo-mechanical treatment. As compared to artificial aging, the cold plastic deformation increases distribution homogeneity and the volume fraction of θ'' or θ' precipitates. These result in a better strengthening effect.

Millennial-Scale Variability in the Indian Monsoon and Links to Ocean Circulation

NASA Astrophysics Data System (ADS)

DeLong, K. A.; Came, R. E.; Johnson, J. E.; Giosan, L.

2014-12-01

Millennial-scale variability in the Indian monsoon was temporally linked to changes in global ocean circulation during the last glacial period, as evidenced by planktic-benthic foraminiferal stable isotope and trace element results from an intermediate depth sediment core from the northwestern Bay of Bengal. Paired planktic foraminiferal Mg/Ca and δ18Oc constrain sea surface temperatures and isolate millennial-scale variations in the δ18O of surface waters (δ18Osw), which resulted from changes in river runoff in the northwestern Bay. Concurrently with low δ18Osw events, benthic foraminiferal δ13C decreased, suggesting an increased influence of an aged water mass at this intermediate depth site during the low salinity events. Benthic foraminiferal Cd/Ca results support the identification of this water mass as aged Glacial Antarctic Intermediate Water (GAAIW). Lagged correlation analysis (r= 0.41) indicates that changes in subsurface properties led changes in surface properties by an average of 380 years. The implication is that Southern Hemisphere climate exerted a controlling influence on the Indian monsoon during the last glacial period.

Characterizing saccular aortic arch aneurysms from the geometry-flow dynamics relationship.

PubMed

Natsume, Kayoko; Shiiya, Norihiko; Takehara, Yasuo; Sugiyama, Masataka; Satoh, Hiroshi; Yamashita, Katsushi; Washiyama, Naoki

2017-06-01

Low wall shear stress (WSS) has been reported to be associated with accelerated atherosclerosis, aneurysm growth, or rupture. We evaluated the geometry of aortic arch aneurysms and their relationship with WSS by using the 4-dimensional flow magnetic resonance imaging to better characterize the saccular aneurysms. We analyzed the geometry in 100 patients using multiplanar reconstruction of computed tomography. We evaluated WSS and vortex flow using 4-dimensional flow magnetic resonance imaging in 16 of them, which were compared with 8 age-matched control subjects and eight healthy young volunteers. Eighty-two patients had a saccular aneurysm, and 18 had a fusiform aneurysm. External diameter/aneurysm length ratio and sac depth/neck width ratio of the fusiform aneurysms were constant at 0.76 ± 0.18 and 0.23 ± 0.09, whereas those of saccular aneurysms, especially those involving the outer curvature, were higher and more variable. Vortex flow was always present in the aneurysms, resulting in low WSS. When the sac depth/neck width ratio was less than 0.8, peak WSS correlated inversely with luminal diameter even in the saccular aneurysms. When this ratio exceeded 0.8, which was the case only with the saccular aneurysms, such correlation no longer existed and WSS was invariably low. Fusiform aneurysms elongate as they dilate, and WSS is lower as the diameter is larger. Saccular aneurysms dilate without proportionate elongation, and they, especially those occupying the inner curvature, have higher and variable sac depth/neck width ratio. When this ratio exceeds 0.8, WSS is low regardless of diameter, which may explain their malignant clinical behavior. Copyright © 2016 The American Association for Thoracic Surgery. Published by Elsevier Inc. All rights reserved.

Low-frequency source parameters of twelve large earthquakes. M.S. Thesis

NASA Technical Reports Server (NTRS)

Harabaglia, Paolo

1993-01-01

A global survey of the low-frequency (1-21 mHz) source characteristics of large events are studied. We are particularly interested in events unusually enriched in low-frequency and in events with a short-term precursor. We model the source time function of 12 large earthquakes using teleseismic data at low frequency. For each event we retrieve the source amplitude spectrum in the frequency range between 1 and 21 mHz with the Silver and Jordan method and the phase-shift spectrum in the frequency range between 1 and 11 mHz with the Riedesel and Jordan method. We then model the source time function by fitting the two spectra. Two of these events, the 1980 Irpinia, Italy, and the 1983 Akita-Oki, Japan, are shallow-depth complex events that took place on multiple faults. In both cases the source time function has a length of about 100 seconds. By comparison Westaway and Jackson find 45 seconds for the Irpinia event and Houston and Kanamori about 50 seconds for the Akita-Oki earthquake. The three deep events and four of the seven intermediate-depth events are fast rupturing earthquakes. A single pulse is sufficient to model the source spectra in the frequency range of our interest. Two other intermediate-depth events have slower rupturing processes, characterized by a continuous energy release lasting for about 40 seconds. The last event is the intermediate-depth 1983 Peru-Ecuador earthquake. It was first recognized as a precursive event by Jordan. We model it with a smooth rupturing process starting about 2 minutes before the high frequency origin time superimposed to an impulsive source.

Heat tolerance in a wild Oryza species is attributed to maintenance of Rubisco activation by a thermally stable Rubisco activase ortholog.

PubMed

Scafaro, Andrew P; Gallé, Alexander; Van Rie, Jeroen; Carmo-Silva, Elizabete; Salvucci, Michael E; Atwell, Brian J

2016-08-01

The mechanistic basis of tolerance to heat stress was investigated in Oryza sativa and two wild rice species, Oryza meridionalis and Oryza australiensis. The wild relatives are endemic to the hot, arid Australian savannah. Leaf elongation rates and gas exchange were measured during short periods of supra-optimal heat, revealing species differences. The Rubisco activase (RCA) gene from each species was sequenced. Using expressed recombinant RCA and leaf-extracted RCA, the kinetic properties of the two isoforms were studied under high temperatures. Leaf elongation was undiminished at 45°C in O. australiensis. The net photosynthetic rate was almost 50% slower in O. sativa at 45°C than at 28°C, while in O. australiensis it was unaffected. Oryza meridionalis exhibited intermediate heat tolerance. Based on previous reports that RCA is heat-labile, the Rubisco activation state was measured. It correlated positively with leaf elongation rates across all three species and four periods of exposure to 45°C. Sequence analysis revealed numerous polymorphisms in the RCA amino acid sequence from O. australiensis. The O. australiensis RCA enzyme was thermally stable up to 42°C, contrasting with RCA from O. sativa, which was inhibited at 36°C. We attribute heat tolerance in the wild species to thermal stability of RCA, enabling Rubisco to remain active. © 2016 The Authors. New Phytologist © 2016 New Phytologist Trust.

A Putative Role for the Tomato Genes DUMPY and CURL-3 in Brassinosteroid Biosynthesis and Response1

PubMed Central

Koka, Chala V.; Cerny, R. Eric; Gardner, Randy G.; Noguchi, Takahiro; Fujioka, Shozo; Takatsuto, Suguru; Yoshida, Shigeo; Clouse, Steven D.

2000-01-01

The dumpy (dpy) mutant of tomato (Lycopersicon esculentum Mill.) exhibits short stature, reduced axillary branching, and altered leaf morphology. Application of brassinolide and castasterone rescued the dpy phenotype, as did C-23-hydroxylated, 6-deoxo intermediates of brassinolide biosynthesis. The brassinolide precursors campesterol, campestanol, and 6-deoxocathasterone failed to rescue, suggesting that dpy may be affected in the conversion of 6-deoxocathasterone to 6-deoxoteasterone, similar to the Arabidopsis constitutive photomorphogenesis and dwarfism (cpd) mutant. Measurements of endogenous brassinosteroid levels by gas chromatography-mass spectrometry were consistent with this hypothesis. To examine brassinosteroid-regulated gene expression in dpy, we performed cDNA subtractive hybridization and isolated a novel xyloglucan endotransglycosylase that is regulated by brassinosteroid treatment. The curl-3 (cu-3) mutant (Lycopersicon pimpinellifolium [Jusl.] Mill.) shows extreme dwarfism, altered leaf morphology, de-etiolation, and reduced fertility, all strikingly similar to the Arabidopsis mutant brassinosteroid insensitive 1 (bri1). Primary root elongation of wild-type L. pimpinellifolium seedlings was strongly inhibited by brassinosteroid application, while cu-3 mutant roots were able to elongate at the same brassinosteroid concentration. Moreover, cu-3 mutants retained sensitivity to indole-3-acetic acid, cytokinins, gibberellin, and abscisic acid while showing hypersensitivity to 2,4-dichlorophenoxyacetic acid in the root elongation assay. The cu-3 root response to hormones, coupled with its bri1-like phenotype, suggests that cu-3 may also be brassinosteroid insensitive. PMID:10631252

Microstructure evolution and tensile properties of Zr-2.5 wt.% Nb pressure tubes processed from billets with different microstructures

DOE Office of Scientific and Technical Information (OSTI.GOV)

Kapoor, K.; Saratchandran, N.; Muralidharan, K.

1999-02-01

Pressurized heavy water reactors (PHWR) use zirconium-base alloys for their low neutron-absorption cross section, good mechanical strength, low irradiation creep, and high corrosion resistance in reactor atmospheres. Starting with identical ingots, billets having different microstructures were obtained by three different processing methods for fabrication of Zr-2.5 wt%Nb pressure tubes., The billets were further processed by hot extrusion and cold Pilger tube reducing to the finished product. Microstructural characterization was done at each stage of processing. The effects of the initial billet microstructure on the intermediate and final microstructure and mechanical property results were determined. It was found that the structuremore » at each stage and the final mechanical properties depend strongly on the initial billet microstructure. The structure at the final stage consists of elongated alpha zirconium grains with a network of metastable beta zirconium phase. Some of this metastable phase transforms into stable beta niobium during thermomechanical processing. Billets with quenched structure resulted in less beta niobium at the final stage. The air cooled billets resulted in a large amount of beta niobium. The tensile properties, especially the percentage elongation, were found to vary for the different methods. Higher percentage elongation was observed for billets having quenched structure. Extrusion and forging did not produce any characteristic differences in the properties. The results were used to select a process flow sheet which yields the desired mechanical properties with suitable microstructure in the final product.« less

The beta -globin locus control region (LCR) functions primarily by enhancing the transition from transcription initiation to elongation.

PubMed

Sawado, Tomoyuki; Halow, Jessica; Bender, M A; Groudine, Mark

2003-04-15

To investigate the molecular basis of beta-globin gene activation, we analyzed factor recruitment and histone modification at the adult beta-globin gene in wild-type (WT)/locus control region knockout (DeltaLCR) heterozygous mice and in murine erythroleukemia (MEL) cells. Although histone acetylation and methylation (Lys 4) are high before and after MEL differentiation, recruitment of the erythroid-specific activator NF-E2 to the promoter and preinitiation complex (PIC) assembly occur only after differentiation. We reported previously that targeted deletion of the LCR reduces beta-globin gene expression to 1%-4% of WT without affecting promoter histone acetylation. Here, we report that NF-E2 is recruited equally efficiently to the adult beta-globin promoters of the DeltaLCR and WT alleles. Moreover, the LCR deletion reduces PIC assembly only twofold, but has a dramatic effect on Ser 5 phosphorylation of RNA polymerase II and transcriptional elongation. Our results suggest at least three distinct stages in beta-globin gene activation: (1) an LCR-independent chromatin opening stage prior to NF-E2 recruitment to the promoter and PIC assembly; (2) an intermediate stage in which NF-E2 binding (LCR-independent) and PIC assembly (partially LCR-dependent) occur; and (3) an LCR-dependent fully active stage characterized by efficient pol II elongation. Thus, in its native location the LCR functions primarily downstream of activator recruitment and PIC assembly.

Imaging and structural analysis of the Geyser field, Iceland, from underwater and drone based photogrammetry

NASA Astrophysics Data System (ADS)

Walter, Thomas R.; Jousset, Philippe; Allahbakhshi, Massoud; Witt, Tanja; Gudmundsson, Magnus T.; Pall Hersir, Gylfi

2017-04-01

The Haukadalur thermal area, southwestern Iceland, is composed of a large number of individual thermal springs, geysers and hot pots that are roughly elongated in a north-south direction. The Haukadalur field is located on the eastern slope of a hill, that is structurally delimited by fissures associated with the Western Volcanic Zone. A detailed analysis on the spatial distribution, structural relations and permeability in the Haukadalur thermal area remained to be carried out. By use of high resolution unmanned aerial vehicle (UAV) based optical and radiometric infrared cameras, we are able to identify over 350 distinct thermal spots distributed in distinct areas. Close analysis of their arrangement yields a preferred direction that is found to be consistent with the assumed tectonic trend in the area. Furthermore by using thermal isolated deep underwater cameras we are able to obtain images from the two largest geysers. Geysir, name giving for all geysers in the world, and Strokkur at depths exceeding 20 m. Near to the surface, the conduit of the geysers are near circular, but at a depth the shape changes into a crack-like elongated fissure. In this presentation we discuss the structural relationship of the deeper and shallower parts of these geysers and elaborate on the conditions of geyser and hot pot formations, with general relevance also for other thermal fields elsewhere.

Geological Characteristics of Active Methane Expulsion In Accretionary Prism Kaoping Slope Off SW Taiwan

NASA Astrophysics Data System (ADS)

Huang, C.; Chien, C.; Yang, T. F.; Lin, S.

2005-12-01

The Kaoping Slope off SW Taiwan represents the syn-collision accretionary prism characterized by active NW-trending folding - thrusting structures and high sedimentation rate favoring the formation of gas hydrate. For an assessment of gas hydrate potential in the Kaoping Slope off SW Taiwan, sedimentology, paleontology and geochemistry in box cores and piston cores were studied. BSRs are commonly found in seismic profiles in 400-600 m below seafloor of water depth 2500-1000 m. Active expulsions of methane were found along active thrust faults where sulfate/methane interface could be as shallow as 30 cm and the methane concentration of dissolved gases in bottom water and in pore-space of drilled core samples could be three-four order higher than the normal marine environments. Occurrences of authigenic carbonate and elongated pyrite tubes are correlated with shallow SMI depth and high methane content in bottom water and pore-space of sediment cores. Authigenic carbonates were found in seafloor surface and in 20-25 meters below seafloor. The authigenic carbonate nodules are characterized by irregular shape, whitish color, no visible microfossil, containing native sulfur, pyrites, gypsum, small open spaces, and very depleted carbon isotope (-54 ~ -43 per mil PDB). Tiny native sulfur and gypsum crystals were commonly found either on surface of foraminiferal tests and elongated pyrite tubes or in the authigenic carbonate nodules. Morphological measurements of elongated pyrite tubes show that they could represent pseudomorphs after three types of Pogonophora tube worm. Foraminifers are commonly filled by rhomboidal pyrites or cemented by pyrite crystals. Normal marine benthic foraminifers predominated by calcareous tests of slope fauna are associated with authigenic carbonate nodules in the study area, suggesting no major geochemistry effect on distribution of benthic foraminifers. Integrating sedimentology, paleontology and geochemistry characters, there could be high potential to have gas hydrate in the accretionary prism off SW Taiwan.

Benchmark dataset for undirected and Mixed Capacitated Arc Routing Problems under Time restrictions with Intermediate Facilities.

PubMed

Willemse, Elias J; Joubert, Johan W

2016-09-01

In this article we present benchmark datasets for the Mixed Capacitated Arc Routing Problem under Time restrictions with Intermediate Facilities (MCARPTIF). The problem is a generalisation of the Capacitated Arc Routing Problem (CARP), and closely represents waste collection routing. Four different test sets are presented, each consisting of multiple instance files, and which can be used to benchmark different solution approaches for the MCARPTIF. An in-depth description of the datasets can be found in "Constructive heuristics for the Mixed Capacity Arc Routing Problem under Time Restrictions with Intermediate Facilities" (Willemseand Joubert, 2016) [2] and "Splitting procedures for the Mixed Capacitated Arc Routing Problem under Time restrictions with Intermediate Facilities" (Willemseand Joubert, in press) [4]. The datasets are publicly available from "Library of benchmark test sets for variants of the Capacitated Arc Routing Problem under Time restrictions with Intermediate Facilities" (Willemse and Joubert, 2016) [3].

Regulation of microtubule (MT)-based cytoskeleton in the seminiferous epithelium during spermatogenesis

PubMed Central

Tang, Elizabeth I.; Mruk, Dolores D.; Cheng, C. Yan

2016-01-01

In rodents and humans, testicular cells, similar to other mammalian cells, are supported by actin-, microtubule (MT)- and intermediate filament-based cytoskeletons to regulate spermatogenesis during the epithelial cycle. However, most of the published findings in the literature are limited to studies that visualize these cytoskeletons in the seminiferous epithelium during spermatogenesis. Few are focus on the underlying molecular mechanism that regulates their organization in the epithelium in response to changes in the stages of the epithelial cycle remains largely explored. Functional studies in the last decade have begun to focus on the role of binding proteins that regulate these cytoskeletons, and some interesting data have been rapidly emerging in the field. Since the actin- and intermediate-based cytoskeletons have been recently reviewed, herein we focus on the MT-based cytoskeleton for two reasons. First, besides serving as a structural support cytoskeleton, MT is known to serve as the track to support and facilitate the transport of germ cells, such as preleptotene spermatocytes connected in clones and elongating/elongated spermatids during spermiogenesis across the blood-testis barrier (BTB) and the adluminal compartment, respectively, during spermatogenesis. While these cellular events are crucial to the completion of spermatogenesis, they have been largely ignored in the past. Second, MT-based cytoskeleton is working in concert with the actin-based cytoskeleton to provide structural support to the transport of intracellular organelles across the cell cytosol, such as endosome-based vesicles, and residual bodies, phagosomes in Sertoli cells, to maintain the cellular homeostasis in the seminiferous epithelium. We critically evaluate some recent published findings herein to support a hypothesis regarding the role of MT in conferring germ cell transport in the seminiferous epithelium. PMID:26791048

Consistent nonlinear deterministic and stochastic evolution equations for deep to shallow water wave shoaling

NASA Astrophysics Data System (ADS)

Vrecica, Teodor; Toledo, Yaron

2015-04-01

One-dimensional deterministic and stochastic evolution equations are derived for the dispersive nonlinear waves while taking dissipation of energy into account. The deterministic nonlinear evolution equations are formulated using operational calculus by following the approach of Bredmose et al. (2005). Their formulation is extended to include the linear and nonlinear effects of wave dissipation due to friction and breaking. The resulting equation set describes the linear evolution of the velocity potential for each wave harmonic coupled by quadratic nonlinear terms. These terms describe the nonlinear interactions between triads of waves, which represent the leading-order nonlinear effects in the near-shore region. The equations are translated to the amplitudes of the surface elevation by using the approach of Agnon and Sheremet (1997) with the correction of Eldeberky and Madsen (1999). The only current possibility for calculating the surface gravity wave field over large domains is by using stochastic wave evolution models. Hence, the above deterministic model is formulated as a stochastic one using the method of Agnon and Sheremet (1997) with two types of stochastic closure relations (Benney and Saffman's, 1966, and Hollway's, 1980). These formulations cannot be applied to the common wave forecasting models without further manipulation, as they include a non-local wave shoaling coefficients (i.e., ones that require integration along the wave rays). Therefore, a localization method was applied (see Stiassnie and Drimer, 2006, and Toledo and Agnon, 2012). This process essentially extracts the local terms that constitute the mean nonlinear energy transfer while discarding the remaining oscillatory terms, which transfer energy back and forth. One of the main findings of this work is the understanding that the approximated non-local coefficients behave in two essentially different manners. In intermediate water depths these coefficients indeed consist of rapidly oscillating terms, but as the water depth becomes shallow they change to an exponential growth (or decay) behavior. Hence, the formerly used localization technique cannot be justified for the shallow water region. A new formulation is devised for the localization in shallow water, it approximates the nonlinear non-local shoaling coefficient in shallow water and matches it to the one fitting to the intermediate water region. This allows the model behavior to be consistent from deep water to intermediate depths and up to the shallow water regime. Various simulations of the model were performed for the cases of intermediate, and shallow water, overall the model was found to give good results in both shallow and intermediate water depths. The essential difference between the shallow and intermediate nonlinear shoaling physics is explained via the dominating class III Bragg resonances phenomenon. By inspecting the resonance conditions and the nature of the dispersion relation, it is shown that unlike in the intermediate water regime, in shallow water depths the formation of resonant interactions is possible without taking into account bottom components. References Agnon, Y. & Sheremet, A. 1997 Stochastic nonlinear shoaling of directional spectra. J. Fluid Mech. 345, 79-99. Benney, D. J. & Saffman, P. G. 1966 Nonlinear interactions of random waves. Proc. R. Soc. Lond. A 289, 301-321. Bredmose, H., Agnon, Y., Madsen, P.A. & Schaffer, H.A. 2005 Wave transformation models with exact second-order transfer. European J. of Mech. - B/Fluids 24 (6), 659-682. Eldeberky, Y. & Madsen, P. A. 1999 Deterministic and stochastic evolution equations for fully dispersive and weakly nonlinear waves. Coastal Engineering 38, 1-24. Kaihatu, J. M. & Kirby, J. T. 1995 Nonlinear transformation of waves in infinite water depth. Phys. Fluids 8, 175-188. Holloway, G. 1980 Oceanic internal waves are not weak waves. J. Phys. Oceanogr. 10, 906-914. Stiassnie, M. & Drimer, N. 2006 Prediction of long forcing waves for harbor agitation studies. J. of waterways, port, coastal and ocean engineering 132(3), 166-171. Toledo, Y. & Agnon, Y. 2012 Stochastic evolution equations with localized nonlinear shoaling coefficients. European J. of Mech. - B/Fluids 34, 13-18.

Vertical Stratification of Peat Pore Water Dissolved Organic Matter Composition in a Peat Bog in Northern Minnesota: Pore Water DOM composition in a peat bog

DOE PAGES

Tfaily, Malak M.; Wilson, Rachel M.; Cooper, William T.; ...

2018-01-29

Here, we characterized dissolved organic matter (DOM) composition throughout the peat column at the Marcell S1 forested bog in northern Minnesota and tested the hypothesis that redox oscillations associated with cycles of wetting and drying at the surface of the fluctuating water table correlate with increased carbon, sulfur, and nitrogen turn over. We found significant vertical stratification of DOM molecular composition and excitation-emission matrix parallel factor analysis components within the peat column. In particular, the intermediate depth zone (~ 50 cm) was identified as a zone where maximum decomposition and turnover is taking place. Surface DOM was dominated by inputsmore » from surface vegetation. The intermediate depth zone was an area of high organic matter reactivity and increased microbial activity with diagenetic formation of many unique compounds, among them polycyclic aromatic compounds that contain both nitrogen and sulfur heteroatoms. These compounds have been previously observed in coal-derived compounds and were assumed to be responsible for coal's biological activity. Biological processes triggered by redox oscillations taking place at the intermediate depth zone of the peat profile at the S1 bog are assumed to be responsible for the formation of these heteroatomic PACs in this system. Alternatively, these compounds could stem from black carbon and nitrogen derived from fires that have occurred at the site in the past. Surface and deep DOM exhibited more similar characteristics, compared to the intermediate depth zone, with the deep layer exhibiting greater input of microbially degraded organic matter than the surface suggesting that the entire peat profile consists of similar parent material at different degrees of decomposition and that lateral and vertical advection of pore water from the surface to the deeper horizons is responsible for such similarities. Lastly, our findings suggest that molecular composition of DOM in peatland pore water is dynamic and is a function of ecosystem activity, water table, redox oscillation, and pore water advection.« less

Vertical Stratification of Peat Pore Water Dissolved Organic Matter Composition in a Peat Bog in Northern Minnesota: Pore Water DOM composition in a peat bog

DOE Office of Scientific and Technical Information (OSTI.GOV)

Tfaily, Malak M.; Wilson, Rachel M.; Cooper, William T.

Here, we characterized dissolved organic matter (DOM) composition throughout the peat column at the Marcell S1 forested bog in northern Minnesota and tested the hypothesis that redox oscillations associated with cycles of wetting and drying at the surface of the fluctuating water table correlate with increased carbon, sulfur, and nitrogen turn over. We found significant vertical stratification of DOM molecular composition and excitation-emission matrix parallel factor analysis components within the peat column. In particular, the intermediate depth zone (~ 50 cm) was identified as a zone where maximum decomposition and turnover is taking place. Surface DOM was dominated by inputsmore » from surface vegetation. The intermediate depth zone was an area of high organic matter reactivity and increased microbial activity with diagenetic formation of many unique compounds, among them polycyclic aromatic compounds that contain both nitrogen and sulfur heteroatoms. These compounds have been previously observed in coal-derived compounds and were assumed to be responsible for coal's biological activity. Biological processes triggered by redox oscillations taking place at the intermediate depth zone of the peat profile at the S1 bog are assumed to be responsible for the formation of these heteroatomic PACs in this system. Alternatively, these compounds could stem from black carbon and nitrogen derived from fires that have occurred at the site in the past. Surface and deep DOM exhibited more similar characteristics, compared to the intermediate depth zone, with the deep layer exhibiting greater input of microbially degraded organic matter than the surface suggesting that the entire peat profile consists of similar parent material at different degrees of decomposition and that lateral and vertical advection of pore water from the surface to the deeper horizons is responsible for such similarities. Lastly, our findings suggest that molecular composition of DOM in peatland pore water is dynamic and is a function of ecosystem activity, water table, redox oscillation, and pore water advection.« less

Method and apparatus for subsurface exploration

NASA Technical Reports Server (NTRS)

Wilcox, Brian (Inventor)

2002-01-01

A subsurface explorer (SSX) for exploring beneath the terrestrial surface of planetary bodies such as the Earth, Mars, or comets. This exploration activity utilizes appropriate sensors and instrument to evaluate the composition, structure, mineralogy and possibly biology of the subsurface medium, as well as perhaps the ability to return samples of that medium back to the surface. The vehicle comprises an elongated skin or body having a front end and a rear end, with a nose piece at the front end for imparting force to composition material of the planetary body. Force is provided by a hammer mechanism to the back side of a nose piece from within the body of the vehicle. In the preferred embodiment, a motor spins an intermediate shaft having two non-uniform threads along with a hammer which engages these threads with two conical rollers. A brake assembly halts the rotation of the intermediate shaft, causing the conical roller to spin down the non-uniform thread to rapidly and efficiently convert the rotational kinetic energy of the hammer into translational energy.

Fluctuations between multiple EF-G-induced chimeric tRNA states during translocation on the ribosome

NASA Astrophysics Data System (ADS)

Adio, Sarah; Senyushkina, Tamara; Peske, Frank; Fischer, Niels; Wintermeyer, Wolfgang; Rodnina, Marina V.

2015-06-01

The coupled translocation of transfer RNA and messenger RNA through the ribosome entails large-scale structural rearrangements, including step-wise movements of the tRNAs. Recent structural work has visualized intermediates of translocation induced by elongation factor G (EF-G) with tRNAs trapped in chimeric states with respect to 30S and 50S ribosomal subunits. The functional role of the chimeric states is not known. Here we follow the formation of translocation intermediates by single-molecule fluorescence resonance energy transfer. Using EF-G mutants, a non-hydrolysable GTP analogue, and fusidic acid, we interfere with either translocation or EF-G release from the ribosome and identify several rapidly interconverting chimeric tRNA states on the reaction pathway. EF-G engagement prevents backward transitions early in translocation and increases the fraction of ribosomes that rapidly fluctuate between hybrid, chimeric and posttranslocation states. Thus, the engagement of EF-G alters the energetics of translocation towards a flat energy landscape, thereby promoting forward tRNA movement.

Body shape transformation along a shared axis of anatomical evolution in labyrinth fishes (Anabantoidei).

PubMed

Collar, David C; Quintero, Michelle; Buttler, Bernardo; Ward, Andrea B; Mehta, Rita S

2016-03-01

Major morphological transformations, such as the evolution of elongate body shape in vertebrates, punctuate evolutionary history. A fundamental step in understanding the processes that give rise to such transformations is identification of the underlying anatomical changes. But as we demonstrate in this study, important insights can also be gained by comparing these changes to those that occur in ancestral and closely related lineages. In labyrinth fishes (Anabantoidei), rapid evolution of a highly derived torpedo-shaped body in the common ancestor of the pikehead (Luciocephalus aura and L. pulcher) occurred primarily through exceptional elongation of the head, with secondary contributions involving reduction in body depth and lengthening of the precaudal vertebral region. This combination of changes aligns closely with the primary axis of anatomical diversification in other anabantoids, revealing that pikehead evolution involved extraordinarily rapid change in structures that were ancestrally labile. Finer-scale examination of the anatomical components that determine head elongation also shows alignment between the pikehead evolutionary trajectory and the primary axis of cranial diversification in anabantoids, with much higher evolutionary rates leading to the pikehead. Altogether, our results show major morphological transformation stemming from extreme change along a shared morphological axis in labyrinth fishes. © 2016 The Author(s). Evolution © 2016 The Society for the Study of Evolution.

Plasmoid formation in the elongated current sheet during transient CHI on HIST

NASA Astrophysics Data System (ADS)

Nagata, Masayoshi; Fujita, Akihiro; Matsui, Takahiro; Kikuchi, Yusuke; Fukumoto, Naoyuki; Kanki, Takashi

2016-10-01

The Transient-Coaxial Helicity Injection (T-CHI) is a promising candidate for the non-inductive plasma start-up on Spherical Torus (ST). The problem of the flux closure in the T-CHI is important and related to understand the physics of fast magnetic reconnection. The recent MHD simulation (F. Ebrahimi and R. Raman, Phys. Rev. Lett. 114, 205003 (2015)) on T-CHI for NSTX predicts the formation and breakup of an elongated Sweet-Parker (S-P) current sheet and a transient to plasmoid instability. According to this simulation, the reconnection rate based on the plasmoid instability is faster than that by S-P model and becomes nearly independent of the Lundquist number S. In this meeting, we will present that the formation of multiple X-points and plasmoids has been observed in T-CHI start-up plasmas on HIST. The stronger external guide (toroidal) magnetic field makes plasma less compressible, leading to slower reconnection time and longer current sheet. The experimental observation shows that 2/3 plasmoids are generated in the elongated current sheet with the narrow width comparable to the ion skin depth or the ion sound gyro-radius. The small plasmoids develop to a large-scale flux structure due to a current inward diffusion during the decay phase.

A new database on subduction seismicity at the global scale

NASA Astrophysics Data System (ADS)

Presti, D.; Heuret, A.; Funiciello, F.; Piromallo, C.

2012-04-01

In the framework of the EURYI Project 'Convergent margins and seismogenesis: defining the risk of great earthquakes by using statistical data and modelling', a global collection of recent intraslab seismicity has been performed. Based on EHB hypocenter and CMT Harvard catalogues, the hypocenters, nodal planes and seismic moments of worldwide subduction-related earthquakes were extracted for the period 1976 - 2007. Data were collected for centroid depths between sea level and 700 km and for magnitude Mw ≥ 5.5. For each subduction zone, a set of trench-normal transects were constructed choosing a 120km width of the cross-section on each side of a vertical plane and a spacing of 1 degree along the trench. For each of the 505 resulting transects, the whole subduction seismogenic zone was mapped as focal mechanisms projected on to a vertical plane after their faulting type classification according to the Aki-Richards convention. Transect by transect, fist the seismicity that can be considered not related to the subduction process under investigation was removed, then was selected the upper plate seismicity (i.e. earthquakes generated within the upper plate as a result of the subduction process). After deletion from the so obtained event subset of the interplate seismicity as identified in the framework of this project by Heuret et al. (2011), we can be reasonably confident that the remaining seismicity can be related to the subducting plate. Among these earthquakes we then selected the intermediate and deep depth seismicity. The upper limit of the intermediate depth seismicity is generally fixed at 70 km depth in order to avoid possible mixing with interplate seismicity. The ranking of intermediate depth and deep seismicity was in most of cases referred to earthquakes with focal depth between 70-300 km and with depth exceeding 300 km, respectively. Outer-rise seismicity was also selected. Following Heuret et al. (2011), the 505 transects were merged into 62 larger segments that were ideally homogeneous in terms of their seismogenic zone characteristics. Comparisons between main seismic parameters (e.g. cumulated seismic moment, P- and T-axes distributions, spatial and temporal distribution of largest magnitudes) with relation to both the different categories selected and the different segments have been performed in order to obtain a snapshot on the general behaviour of global subduction-related seismicity.

An Effective Method to Detect Volatile Intermediates Generated in the Bioconversion of Coal to Methane by Gas Chromatography-Mass Spectrometry after In-Situ Extraction Using Headspace Solid-Phase Micro-Extraction under Strict Anaerobic Conditions.

PubMed

Liu, Jianmin; Wang, Baoyu; Tai, Chao; Wu, Li; Zhao, Han; Guan, Jiadong; Chen, Linyong

2016-01-01

Bioconversion of coal to methane has gained increased attention in recent decades because of its economic and environmental advantages. However, the mechanism of this process is difficult to study in depth, partly because of difficulties associated with the analysis of intermediates generated in coal bioconversion. In this investigation, we report on an effective method to analyze volatile intermediates generated in the bioconversion of coal under strict anaerobic conditions. We conduct in-situ extraction of intermediates using headspace solid-phase micro-extraction followed by detection by gas chromatography-mass spectrometry. Bioconversion simulation equipment was modified and combined with a solid-phase micro-extraction device. In-situ extraction could be achieved by using the combined units, to avoid a breakdown in anaerobic conditions and to maintain the experiment continuity. More than 30 intermediates were identified qualitatively in the conversion process, and the variation in trends of some typical intermediates has been discussed. Volatile organic acids (C2-C7) were chosen for a quantitative study of the intermediates because of their importance during coal bioconversion to methane. Fiber coating, extraction time, and solution acidity were optimized in the solid-phase micro-extraction procedure. The pressure was enhanced during the bioconversion process to investigate the influence of headspace pressure on analyte extraction. The detection limits of the method ranged from 0.0006 to 0.02 mmol/L for the volatile organic acids and the relative standard deviations were between 4.6% and 11.5%. The volatile organic acids (C2-C7) generated in the bioconversion process were 0.01-1.15 mmol/L with a recovery range from 80% to 105%. The developed method is useful for further in-depth research on the bioconversion of coal to methane.

An Effective Method to Detect Volatile Intermediates Generated in the Bioconversion of Coal to Methane by Gas Chromatography-Mass Spectrometry after In-Situ Extraction Using Headspace Solid-Phase Micro-Extraction under Strict Anaerobic Conditions

PubMed Central

Liu, Jianmin; Wang, Baoyu; Tai, Chao; Wu, Li; Zhao, Han; Guan, Jiadong; Chen, Linyong

2016-01-01

Bioconversion of coal to methane has gained increased attention in recent decades because of its economic and environmental advantages. However, the mechanism of this process is difficult to study in depth, partly because of difficulties associated with the analysis of intermediates generated in coal bioconversion. In this investigation, we report on an effective method to analyze volatile intermediates generated in the bioconversion of coal under strict anaerobic conditions. We conduct in-situ extraction of intermediates using headspace solid-phase micro-extraction followed by detection by gas chromatography-mass spectrometry. Bioconversion simulation equipment was modified and combined with a solid-phase micro-extraction device. In-situ extraction could be achieved by using the combined units, to avoid a breakdown in anaerobic conditions and to maintain the experiment continuity. More than 30 intermediates were identified qualitatively in the conversion process, and the variation in trends of some typical intermediates has been discussed. Volatile organic acids (C2–C7) were chosen for a quantitative study of the intermediates because of their importance during coal bioconversion to methane. Fiber coating, extraction time, and solution acidity were optimized in the solid-phase micro-extraction procedure. The pressure was enhanced during the bioconversion process to investigate the influence of headspace pressure on analyte extraction. The detection limits of the method ranged from 0.0006 to 0.02 mmol/L for the volatile organic acids and the relative standard deviations were between 4.6% and 11.5%. The volatile organic acids (C2–C7) generated in the bioconversion process were 0.01–1.15 mmol/L with a recovery range from 80% to 105%. The developed method is useful for further in-depth research on the bioconversion of coal to methane. PMID:27695055

Deglacial Ocean Circulation Scheme at Intermediate Depths in the Tropical North Atlantic

NASA Astrophysics Data System (ADS)

Xie, R. C.; Marcantonio, F.; Schmidt, M. W.

2014-12-01

In the modern Atlantic Ocean, intermediate water circulation is largely governed by the southward flowing upper North Atlantic Deep Water (NADW) and the northward return flow Antarctic Intermediate Water (AAIW). During the last deglaciation, it is commonly accepted that the southward flow Glacial North Atlantic Intermediate Water, the glacial analogue of NADW, contributed significantly to past variations in intermediate water circulation. However, to date, there is no common consensus of the role AAIW played during the last deglaciation, especially across abrupt climate events such as the Heinrich 1 and the Younger Dryas. This study aims to reconstruct intermediate northern- and southern-sourced water circulation in the tropical North Atlantic during the past 22 kyr and attempts to confine the boundary between AAIW and northern-sourced intermediate waters in the past. High-resolution Nd isotopic compositions (ɛNd thereafter) of fish debris and bulk sediment acid-reductive leachate from the Southern Caribbean (VM12-107; 1079 m) are inconsistent, again casting concerns, as already raised by recent studies, on the reliability of the leachate method in extracting seawater ɛNd signature. This urges the need to carefully verify the seawater ɛNd integrity in sediment acid-reductive leachate in various oceanic settings. Fish debris Nd isotope record in our study displays a two-step decreasing trend from the early deglaciation to early Holocene. We interpret this as recording a two-step deglacial recovery of the upper NADW, given the assumption on a more radiogenic glacial northern-sourced water is valid. Comparing with authigenic ɛNd records in the Florida Straits [1] and the Demarara Rise [2], our new fish debris ɛNd results suggest that, in the tropical western North Atlantic, glacial and deglacial AAIW never penetrated beyond the lower depth limit of modern AAIW. [1] Xie et al., GCA (140) 2014; [2] Huang et al., EPSL (389) 2014

Effects of Geometric Variations on Lift Augmentation of Simple-plenum-chamber Ground-effect Models

NASA Technical Reports Server (NTRS)

Davenport, Edwin E.

1961-01-01

Considerable interest has been shown during recent years in ground-effect vehicles. Of the various types proposed, the simple-plenum-chamber vehicle has indicated promise because, although the lift augmentation obtainable appears to be less than that of an annular jet, it may be somewhat less complicated structurally. The present investigation was undertaken to study the effects of some geometric variations upon lift augmentation of a simple plenum chamber within ground proximity. The variables included the ratio inlet area to exit area, plenum-chamber depth, and entrance configuration. An optimum plenum-chamber depth appeared to be between 3 and 10 percent of the plenum-chamber diameter with a ratio of inlet diameter to plenum-chamber diameter of 0.15 for the range of plenum-chamber depths investigated. The most important effect of multiple inlets was the elimination of negative lift augmentation, which was experienced with single sharp-edged inlets, at intermediate heights. Installation of a flared inlet and a turning-vane assembly improved lift augmentation of a single-inlet configuration at intermediate heights.

Legacy effects of grassland management on soil carbon to depth.

PubMed

Ward, Susan E; Smart, Simon M; Quirk, Helen; Tallowin, Jerry R B; Mortimer, Simon R; Shiel, Robert S; Wilby, Andrew; Bardgett, Richard D

2016-08-01

The importance of managing land to optimize carbon sequestration for climate change mitigation is widely recognized, with grasslands being identified as having the potential to sequester additional carbon. However, most soil carbon inventories only consider surface soils, and most large-scale surveys group ecosystems into broad habitats without considering management intensity. Consequently, little is known about the quantity of deep soil carbon and its sensitivity to management. From a nationwide survey of grassland soils to 1 m depth, we show that carbon in grassland soils is vulnerable to management and that these management effects can be detected to considerable depth down the soil profile, albeit at decreasing significance with depth. Carbon concentrations in soil decreased as management intensity increased, but greatest soil carbon stocks (accounting for bulk density differences), were at intermediate levels of management. Our study also highlights the considerable amounts of carbon in subsurface soil below 30 cm, which is missed by standard carbon inventories. We estimate grassland soil carbon in Great Britain to be 2097 Tg C to a depth of 1 m, with ~60% of this carbon being below 30 cm. Total stocks of soil carbon (t ha(-1) ) to 1 m depth were 10.7% greater at intermediate relative to intensive management, which equates to 10.1 t ha(-1) in surface soils (0-30 cm), and 13.7 t ha(-1) in soils from 30 to 100 cm depth. Our findings highlight the existence of substantial carbon stocks at depth in grassland soils that are sensitive to management. This is of high relevance globally, given the extent of land cover and large stocks of carbon held in temperate managed grasslands. Our findings have implications for the future management of grasslands for carbon storage and climate mitigation, and for global carbon models which do not currently account for changes in soil carbon to depth with management. © 2016 John Wiley & Sons Ltd.

Seasonal variability of the Red Sea, from satellite gravity, radar altimetry, and in situ observations

NASA Astrophysics Data System (ADS)

Wahr, John; Smeed, David A.; Leuliette, Eric; Swenson, Sean

2014-08-01

Seasonal variations of sea surface height (SSH) and mass within the Red Sea are caused mostly by exchange of heat with the atmosphere and by flow through the strait opening into the Gulf of Aden to the south. That flow involves a net mass transfer into the Red Sea during fall and out during spring, though in summer there is an influx of cool water at intermediate depths. Thus, summer water in the south is warmer near the surface due to higher air temperatures, but cooler at intermediate depths. Summer water in the north experiences warming by air-sea exchange only. The temperature affects water density, which impacts SSH but has no effect on mass. We study this seasonal cycle by combining GRACE mass estimates, altimeter SSH measurements, and steric contributions derived from the World Ocean Atlas temperature climatology. Among our conclusions are: mass contributions are much larger than steric contributions; the mass is largest in winter, consistent with winds pushing water into the Red Sea in fall and out during spring; the steric signal is largest in summer, consistent with surface warming; and the cool, intermediate-depth water flowing into the Red Sea in spring has little impact on the steric signal, because contributions from the lowered temperature are offset by effects of decreased salinity. The results suggest that the combined use of altimeter and GRACE measurements can provide a useful alternative to in situ data for monitoring the steric signal.

Dehydration kinetics of talc and 10 Å phase: Consequences for subduction zone seismicity

NASA Astrophysics Data System (ADS)

Chollet, Mélanie; Daniel, Isabelle; Koga, Kenneth T.; Petitgirard, Sylvain; Morard, Guillaume

2009-06-01

The process of dehydration embrittlement is usually proposed as an explanation for the presence of intermediate-depth earthquakes in subduction zones. It assumes that the release of water by hydrous mineral breakdown is fast enough to provoke brittle failure. We performed high-pressure, high-temperature, dehydration experiments of talc and 10 Å phase coupled with in situ measurement of reaction kinetics using synchrotron X-ray diffraction. Newly developed, X-ray transparent, pressure-sealed, titanium capsule ensured a closed thermochemical environment. From isothermal kinetics data fitted to the Avrami's equation and from the texture of reaction products, we conclude that dehydration rates of these minerals are limited by diffusion. Predicted minimum rates of fluid release range from 10 - 4 to 9 × 10 - 6 m 3fluid m - 3 rock s - 1 , and are fast enough to provoke hydraulic rupture since Maxwell relaxation rate of rocks relevant of subduction zones are slower than the rate of fluid release. These rates are comparable between talc, 10 Å phase and antigorite also [Perrillat, J.-P., Daniel, I., Koga, K.T., Reynard, B., Cardon, H., Crichton, W.A., 2005. Kinetics of antigorite dehydration: a real-time X-ray diffraction study. Earth Planet. Sci. Lett. 236, 899-913]. Consequently, we suggest that the dehydration of hydrous minerals may eventually be fast enough to trigger the intermediate-depth earthquakes, and that the deepest among intermediate-depth earthquakes may actually locate the limits for dehydration of hydrous minerals in the downgoing lithosphere.

A-thermal elastic behavior of silicate glasses.

PubMed

Rabia, Mohammed Kamel; Degioanni, Simon; Martinet, Christine; Le Brusq, Jacques; Champagnon, Bernard; Vouagner, Dominique

2016-02-24

Depending on the composition of silicate glasses, their elastic moduli can increase or decrease as function of the temperature. Studying the Brillouin frequency shift of these glasses versus temperature allows the a-thermal composition corresponding to an intermediate glass to be determined. In an intermediate glass, the elastic moduli are independent of the temperature over a large temperature range. For sodium alumino-silicate glasses, the a-thermal composition is close to the albite glass (NaAlSi3O8). The structural origin of this property is studied by in situ high temperature Raman scattering. The structure of the intermediate albite glass and of silica are compared at different temperatures between room temperature and 600 °C. When the temperature increases, it is shown that the high frequency shift of the main band at 440 cm(-1) in silica is a consequence of the cristobalite-like alpha-beta transformation of 6-membered rings. This effect is stronger in silica than bond elongation (anharmonic effects). As a consequence, the elastic moduli of silica increase as the temperature increases. In the albite glass, the substitution of 25% of Si(4+) ions by Al(3+) and Na(+) ions decreases the proportion of SiO2 6-membered rings responsible for the silica anomaly. The effects of the silica anomaly balance the anharmonicity in albite glass and give rise to an intermediate a-thermal glass. Different networks, formers or modifiers, can be added to produce different a-thermal glasses with useful mechanical or chemical properties.

RNA splicing regulates the temporal order of TNF-induced gene expression.

PubMed

Hao, Shengli; Baltimore, David

2013-07-16

When cells are induced to express inflammatory genes by treatment with TNF, the mRNAs for the induced genes appear in three distinct waves, defining gene groups I, II, and III, or early, intermediate, and late genes. To examine the basis for these different kinetic classes, we have developed a PCR-based procedure to distinguish pre-mRNAs from mRNAs. It shows that the three groups initiate transcription virtually simultaneously but that delays in splicing characterize groups II and III. We also examined the elongation times, concluding that pre-mRNA synthesis is coordinate but splicing differences directly regulate the timing of mRNA production.

Circulation in the Mediterranean Sea and consequences on the water quality

NASA Astrophysics Data System (ADS)

Millot, C.

2003-04-01

Atlantic Water (AW) flows into the Mediterranean Sea (about 10 super(6) m super(3)/s) to compensate for the deficit (about 10 super(5) m super(3)/s) created by evaporation larger than precipitation and river runoff there. Mainly due to the earth's rotation, the current is generally bent to the right, so that AW flows anticlockwise alongslope in both the western and the eastern basins. Meanwhile, it is continuously evaporated and thus made denser. In winter, dry and cold air masses transported by violent northerly winds induce large losses of latent and sensible heat. Hence, AW sinks in some specific regions located in the northern part of the various subbasins. The intermediate and deep waters that are formed in such a way then circulate, still bent to the right by the earth's rotation, before flowing through the various channels and, finally, out from the sea. The Mediterranean Sea is thus a machine that transforms surface oceanic water into saltier (by about 2 psu) cooler (by about 2 °C) and denser (by about 2 kg/m super(3)) waters that will flow and spread at intermediate depths (1000-1200 m) in most of the northern Atlantic. Due to the west-east elongated shape of both basins, and to the specific locations of their openings, AW first flows eastwards in the southern part of each basin. There, the current is markedly unstable and it generates, all year long and a few times per year, 100-200 km anticyclonic eddies that propagate downstream at a few km/day, extend possibly down to the bottom (about 3000 m), and have lifetimes up to 3 years at least. Especially in the eastern basin, similar eddies are induced in specific places by the Etesians, they can propagate then and survive for more than one year. All these eddies strongly interact, either with their parent current of with other eddies, and two eddies can merge. Natural barriers (islands and/or the bathymetry) prevent these eddies from reaching the eastern parts of the basins so that AW there flows northward in a relatively gentle way. In the northern parts of the basins, AW flows westwards, strongly interacting with the process of dense water formation and thus displaying a marked seasonal variability. At intermediate and greater depths, the circulation is less well specified, but it can display a marked variability at seasonal and meso- scales, and it can be much more intense than generally thought. On the whole, consequences on the water quality are that floating materials are transported all around the sea, eventually pushed southwards by the dominant winds, but still maintained within the sea. Conversely, all dissolved materials will, some time, be flushed out of the sea. At basin scale, sewage effluents released along the southern coasts will generally be entrained either alongslope (in one direction or the other) or seaward, before eventually coming back. Effluents from the eastern and northern coasts will generally be entrained alongslope downstream.

Minor elements in Quaternary sediment from the Sea of Japan: a record of surface-water productivity and intermediate-water redox conditions

USGS Publications Warehouse

Piper, D.Z.; Isaacs, C.M.

1995-01-01

Records six episodes of high accumulation rates of Cd, Cr, Cu, Mo, Ni, U, V, and Zn. The high rates correspond to periods of sulfate reduction in the water column at the intermediate depth of Oki Ridge; the intervening low values correspond to periods of denitrification and oxygen respiration. The maxima have a period of 41 k.y., the youngest having an age of 1.10 Ma. -from Authors

Modeling Postconvective Submesoscale Coherent Vortices in the Northwestern Mediterranean Sea

NASA Astrophysics Data System (ADS)

Damien, P.; Bosse, A.; Testor, P.; Marsaleix, P.; Estournel, C.

2017-12-01

For the first time, the formation of submesoscale coherent vortices (SCVs) during intermediate and deep convection events is documented in a realistic high-resolution (1 km) numerical simulation of the oceanic circulation in the northwestern Mediterranean Sea. Winter intermediate and deep convection leads to the formation of anticyclonic and cyclonic eddies with lifetimes exceeding 1 year. By focusing on three typical eddies, the main characteristics of such vortices are discussed. The anticyclonic eddies are typical of SCVs observed in deep convection areas so far. They are characterized by a small radius (˜6.5 km) and orbital peak velocities of about 7 cm/s located at great depth (˜1500 m) or intermediate depth (˜500 m). The cyclonic vortices show very similar characteristics, such as a high Rossby number (˜0.4), but with surface-intensified structures. The long lifetimes of both anticyclonic and cyclonic eddies reflect very slow diffusive processes between their core and their surroundings and a strong resistance to external perturbations. These long-lived eddies are found to participate in the spreading of a significant portion (from 15 to 35%) of the convected waters in the Gulf of Lions and contribute to the ventilation of the deep basin.

The Syrtis Major volcano, Mars: A multidisciplinary approach to interpreting its magmatic evolution and structural development

NASA Astrophysics Data System (ADS)

Lillis, Robert J.; Dufek, Josef; Kiefer, Walter S.; Black, Benjamin A.; Manga, Michael; Richardson, Jacob A.; Bleacher, Jacob E.

2015-09-01

Very weak crustal magnetic fields over the Syrtis Major volcanic complex imply almost total thermal demagnetization via magmatic intrusions over a large area less than ~4 Ga. We fit a model of these intrusions and the resulting thermal demagnetization to maps of crustal magnetic field strength at 185 km altitude. The best fits are most consistent with a "dog bone"-shaped region of intrusive material, elongated approximately north-south, with an area of ~350,000 km2 and an inferred volume of ~4-19 × 106 km3. Such a large volume is best explained by a long-lived mantle plume beneath the Syrtis edifice. A free-air gravity anomaly high over the Syrtis Major caldera is consistent with dense mafic residue remaining at depth following crystal fractionation that produced the silicic magmas seen at the surface. The elongation of this region is consistent with ascent and north-south emplacement of magma enabled by structures parallel to and associated with the preexisting Isidis impact basin.

Computer based imaging and analysis of root gravitropism

NASA Technical Reports Server (NTRS)

Evans, M. L.; Ishikawa, H.

1997-01-01

Two key issues in studies of the nature of the gravitropic response in roots have been the determination of the precise pattern of differential elongation responsible for downward bending and the identification of the cells that show the initial motor response. The main approach for examining patterns of differential growth during root gravitropic curvature has been to apply markers to the root surface and photograph the root at regular intervals during gravitropic curvature. Although these studies have provided valuable information on the characteristics of the gravitropic motor response in roots, their labor intensive nature limits sample size and discourages both high frequency of sampling and depth of analysis of surface expansion data. In this brief review we describe the development of computer-based video analysis systems for automated measurement of root growth and shape change and discuss some key features of the root gravitropic response that have been revealed using this methodology. We summarize the capabilities of several new pieces of software designed to measure growth and shape changes in graviresponding roots and describe recent progress in developing analysis systems for studying the small, but experimentally popular, primary roots of Arabidopsis. A key finding revealed by such studies is that the initial gravitropic response of roots of maize and Arabidopsis occurs in the distal elongation zone (DEZ) near the root apical meristem, not in the main elongation zone. Another finding is that the initiation of rapid elongation in the DEZ following gravistimulation appears to be related to rapid membrane potential changes in this region of the root. These observations have provided the incentive for ongoing studies examining possible links between potential growth modifying factors (auxin, calcium, protons) and gravistimulated changes in membrane potential and growth patterns in the DEZ.

Genetics and Assembly Line Enzymology of Siderophore Biosynthesis in Bacteria

PubMed Central

Crosa, Jorge H.; Walsh, Christopher T.

2002-01-01

The regulatory logic of siderophore biosynthetic genes in bacteria involves the universal repressor Fur, which acts together with iron as a negative regulator. However in other bacteria, in addition to the Fur-mediated mechanism of regulation, there is a concurrent positive regulation of iron transport and siderophore biosynthetic genes that occurs under conditions of iron deprivation. Despite these regulatory differences the mechanisms of siderophore biosynthesis follow the same fundamental enzymatic logic, which involves a series of elongating acyl-S-enzyme intermediates on multimodular protein assembly lines: nonribosomal peptide synthetases (NRPS). A substantial variety of siderophore structures are produced from similar NRPS assembly lines, and variation can come in the choice of the phenolic acid selected as the N-cap, the tailoring of amino acid residues during chain elongation, the mode of chain termination, and the nature of the capturing nucleophile of the siderophore acyl chain being released. Of course the specific parts that get assembled in a given bacterium may reflect a combination of the inventory of biosynthetic and tailoring gene clusters available. This modular assembly logic can account for all known siderophores. The ability to mix and match domains within modules and to swap modules themselves is likely to be an ongoing process in combinatorial biosynthesis. NRPS evolution will try out new combinations of chain initiation, elongation and tailoring, and termination steps, possibly by genetic exchange with other microorganisms and/or within the same bacterium, to create new variants of iron-chelating siderophores that can fit a particular niche for the producer bacterium. PMID:12040125

Vertical Stratification of Peat Pore Water Dissolved Organic Matter Composition in a Peat Bog in Northern Minnesota: Pore Water DOM composition in a peat bog

DOE Office of Scientific and Technical Information (OSTI.GOV)

Tfaily, Malak M.; Wilson, Rachel M.; Cooper, William T.

We characterized dissolved organic matter (DOM) composition throughout the peat column at the Marcell S1 forested bog in northern Minnesota and tested the hypothesis that redox oscillations associated with cycles of wetting and drying at the surface of the fluctuating water table correlate with increased carbon, sulfur and nitrogen turn over. We found significant vertical stratification of DOM molecular composition and EEM-PARAFAC components within the peat column. In particular the intermediate depth zone (~ 50 cm) was identified as a zone where maximum decomposition and turnover is taking place. Surface DOM was dominated by inputs from surface vegetation. The intermediate-depthmore » zone was an area of high organic matter reactivity and increased microbial activity with diagenetic formation of many unique compounds, among them polycyclic aromatic compounds (PAC) that contain both nitrogen and sulfur heteroatoms. These compounds have been previously observed in coal-derived compounds and were assumed to be responsible for coal's biological activity. Biological processes triggered by redox oscillations taking place at the intermediate depth zone of the peat profile at the S1 bog are assumed to be responsible for the formation of these heteroatomic PACs in this system. Alternatively these compounds could stem from black carbon and nitrogen derived from fires that have occurred at the site in the past. Surface and deep DOM exhibited more similar characteristics, compared to the intermediate-depth zone, with the deep layer exhibiting greater input of microbially degraded organic matter than the surface suggesting that the entire peat profile consists of similar parent material at different degrees of decomposition and that lateral and vertical advection of pore water from the surface to the deeper horizons is responsible for such similarities. Our findings suggest that molecular composition of DOM in peatland pore water is dynamic and is a function of ecosystem activity, water table and redox oscillation and porewater advection.« less

Slab tears and intermediate-depth seismicity

USGS Publications Warehouse

Meighan, Hallie E.; ten Brink, Uri S.; Pulliam, Jay

2013-01-01

Active tectonic regions where plate boundaries transition from subduction to strike slip can take several forms, such as triple junctions, acute, and obtuse corners. Well-documented slab tears that are associated with high rates of intermediate-depth seismicity are considered here: Gibraltar arc, the southern and northern ends of the Lesser Antilles arc, and the northern end of Tonga trench. Seismicity at each of these locations occurs, at times, in the form of swarms or clusters, and various authors have proposed that each marks an active locus of tear propagation. The swarms and clusters start at the top of the slab below the asthenospheric wedge and extend 30–60 km vertically downward within the slab. We propose that these swarms and clusters are generated by fluid-related embrittlement of mantle rocks. Focal mechanisms of these swarms generally fit the shear motion that is thought to be associated with the tearing process.

Multiple-Scale Physics During Magnetic Reconnection

DOE Office of Scientific and Technical Information (OSTI.GOV)

Jara-Almonte, Jonathan

Magnetic reconnection is a key fundamental process in magnetized plasmas wherein the global magnetic topology is modified and stored energy is transferred from fields to particles. Reconnection is an inherently local process, and mechanisms to couple global-scale dynamics are not well understood. This dissertation explores two different mechanisms for cross-scale coupling during magnetic reconnection. As one example, we theoretically examine reconnection in a collisionless plasma using particle-in-cell simulations and demonstrate that large scale reconnection physics can couple to and drive microscopic instabilities, even in two-dimensional systems if significant scale separation exists between the Debye length and the electron skin depth.more » The physics underlying these instabilities is explained using simple theoretical models, and their potential connection to existing discrepancies between laboratory experiments and numerical simulations is explored. In three-dimensional systems, these instabilities are shown to generate anomalous resistivity that balances a substantial fraction of the electric field. In contrast, we also use experiments to investigate cross-scale couplings during reconnection in a collisional plasma. A leading candidate for coupling global and local scales is the hierarchical breakdown of elongated, reconnecting current sheets into numerous smaller current sheets -– the plasmoid instability. In the Magnetic Reconnection Experiment (MRX), recent hardware improvements have extended the accessible parameter space allowing for the study of long-lived, elongated current sheets. Moreover, by using Argon, reproducible and collisional plasmas are produced, which allow for a detailed statistical study of collisional reconnection. As a result, we have conclusively measured the onset of sub-ion-scale plasmoids during resistive, anti-parallel reconnection for the first time. The current sheet thickness is intermediate between ion and electron kinetic scales such that the plasma is in the Hall-MHD regime. Surprisingly, plasmoids are observed at Lundquist numbers < 100 well below theoretical predictions (> 10,000). The number of plasmoids scales with both Lundquist number and current sheet aspect ratio. The Hall quadrupolar fields are shown to suppress plasmoids. Finally, plasmoids are shown to couple local and global physics by enhancing the reconnection rate. These results are compared with prior studies of tearing and plasmoid instability, and implications for astrophysical plasmas, laboratory experiments, and theoretical studies of reconnection are discussed.« less

Mechanism of Polyubiquitination by Human Anaphase-Promoting Complex: RING Repurposing for Ubiquitin Chain Assembly

DOE PAGES

Brown, Nicholas G.; Watson, Edmond R.; Weissmann, Florian; ...

2014-10-09

Polyubiquitination by E2 and E3 enzymes is a predominant mechanism regulating protein function. Some RING E3s, including anaphase-promoting complex/cyclosome (APC), catalyze polyubiquitination by sequential reactions with two different E2s. An initiating E2 ligates ubiquitin to an E3-bound substrate. Another E2 grows a polyubiquitin chain on the ubiquitin-primed substrate through poorly defined mechanisms. Here in this paper we show that human APC’s RING domain is repurposed for dual functions in polyubiquitination. The canonical RING surface activates an initiating E2-ubiquitin intermediate for substrate modification. However, APC engages and activates its specialized ubiquitin chain-elongating E2 UBE2S in ways that differ from current paradigms.more » During chain assembly, a distinct APC11 RING surface helps deliver a substrate-linked ubiquitin to accept another ubiquitin from UBE2S. Our data define mechanisms of APC/UBE2S-mediated polyubiquitination, reveal diverse functions of RING E3s and E2s, and provide a framework for understanding distinctive RING E3 features specifying ubiquitin chain elongation.« less

Chemoenzymatic Total Synthesis and Structural Diversification of Tylactone-Based Macrolide Antibiotics through Late-Stage Polyketide Assembly, Tailoring, and C-H Functionalization.

PubMed

Lowell, Andrew N; DeMars, Matthew D; Slocum, Samuel T; Yu, Fengan; Anand, Krithika; Chemler, Joseph A; Korakavi, Nisha; Priessnitz, Jennifer K; Park, Sung Ryeol; Koch, Aaron A; Schultz, Pamela J; Sherman, David H

2017-06-14

Polyketide synthases (PKSs) represent a powerful catalytic platform capable of effecting multiple carbon-carbon bond forming reactions and oxidation state adjustments. We explored the functionality of two terminal PKS modules that produce the 16-membered tylosin macrocycle, using them as biocatalysts in the chemoenzymatic synthesis of tylactone and its subsequent elaboration to complete the first total synthesis of the juvenimicin, M-4365, and rosamicin classes of macrolide antibiotics via late-stage diversification. Synthetic chemistry was employed to generate the tylactone hexaketide chain elongation intermediate that was accepted by the juvenimicin (Juv) ketosynthase of the penultimate JuvEIV PKS module. The hexaketide is processed through two complete modules (JuvEIV and JuvEV) in vitro, which catalyze elongation and functionalization of two ketide units followed by cyclization of the resulting octaketide into tylactone. After macrolactonization, a combination of in vivo glycosylation, selective in vitro cytochrome P450-mediated oxidation, and chemical oxidation was used to complete the scalable construction of a series of macrolide natural products in as few as 15 linear steps (21 total) with an overall yield of 4.6%.

Microprocessor Recruitment to Elongating RNA Polymerase II Is Required for Differential Expression of MicroRNAs.

PubMed

Church, Victoria A; Pressman, Sigal; Isaji, Mamiko; Truscott, Mary; Cizmecioglu, Nihal Terzi; Buratowski, Stephen; Frolov, Maxim V; Carthew, Richard W

2017-09-26

The cellular abundance of mature microRNAs (miRNAs) is dictated by the efficiency of nuclear processing of primary miRNA transcripts (pri-miRNAs) into pre-miRNA intermediates. The Microprocessor complex of Drosha and DGCR8 carries this out, but it has been unclear what controls Microprocessor's differential processing of various pri-miRNAs. Here, we show that Drosophila DGCR8 (Pasha) directly associates with the C-terminal domain of the RNA polymerase II elongation complex when it is phosphorylated by the Cdk9 kinase (pTEFb). When association is blocked by loss of Cdk9 activity, a global change in pri-miRNA processing is detected. Processing of pri-miRNAs with a UGU sequence motif in their apical junction domain increases, while processing of pri-miRNAs lacking this motif decreases. Therefore, phosphorylation of RNA polymerase II recruits Microprocessor for co-transcriptional processing of non-UGU pri-miRNAs that would otherwise be poorly processed. In contrast, UGU-positive pri-miRNAs are robustly processed by Microprocessor independent of RNA polymerase association. Copyright © 2017 The Author(s). Published by Elsevier Inc. All rights reserved.

Effects of porosity on weld-joint tensile strength of aluminum alloys

NASA Technical Reports Server (NTRS)

Lovoy, C. V.

1974-01-01

Tensile properties in defect-free weldments of aluminum alloys 2014-T6 and 2219-T87 (sheet and plate) are shown to be related to the level or concentration of induced simulated porosity. The scatter diagram shows that the ultimate tensile strength of the weldments displays the most pronounced linear relationship with the level of porosity. The relationships between yield strength or elongation and porosity are either trivial or inconsequential in the lower and intermediate levels of porosity content. In highly concentrated levels of porosity, both yield strength and elongation values decrease markedly. Correlation coefficients were obtained by simple straight line regression analysis between the variables of ultimate tensile strength and pore level. The coefficients were greater, indicating a better correlation, using a pore area accumulation concept or pore volume accumulation than the accumulation of the pore diameters. These relationships provide a useful tool for assessing the existing aerospace radiographic acceptance standards with respect to permissible porosity. In addition, these relationships, in combination with known design load requirements, will serve as an engineering guideline in determining when a weld repair is necessary based on accumulative pore level as detected by radiographic techniques.

Continental Delamination of the Romanian Eastern Carpathians: A Lower Crustal Origin of the Vrancea Seismogenic Zone?

NASA Astrophysics Data System (ADS)

Fillerup, M. A.; Knapp, J. H.; Knapp, C. C.

2006-12-01

Two lithosphere-scale, explosive-source seismic reflection profiles (DRACULA I and DACIA PLAN), inclusive of the hinterland and foreland of the Romanian Eastern Carpathians, provide new evidence for the geodynamic origin of the Vrancea Seismogenic Zone (VSZ) of Romania. These data, collected to evaluate existing subduction-related and delamination geodynamic models proposed to explain the intermediate depth seismicity associated with the Vrancea zone, show evidence of continental crust extending continuously above the VSZ from the Carpathian foreland well into the Transylvanian hinterland. Crustal thicknesses inferred from these data based on reflectivity show a 40-45 km crust below the Transylvanian basin abruptly shallowing to 32 km for ~120 km beneath the fold and thrust belt of the main Carpathian orogen and thickening again to 38-42 km crust in the foreland. This thinned crust outlines an apparent lower crustal sub-orogenic cavity that is overlain by a relatively subhorizontal reflective fabric absent of dipping reflectivity. The northwest dipping Vrancea seismogenic body, a 30x70x200 km volume of intermediate depth earthquakes, is located on the eastern flank of the apparently thin crust beneath the Carpathian orogen. Amplitude decay curves show penetration of seismic energy to a depth of ~60 km in the vicinity of the sub-orogenic cavity, implying this non- reflective zone is a geologic signature. Rotation of the VSZ about a hinge beneath the foreland basin at a depth of ~50 km restores to fill the lower-crustal cavity under the orogen, suggesting the VSZ represents a portion of brittle lower crust delaminated during continental lithospheric delamination which may have caused regional uplift of the Transylvanian basin. The lack of through-going, dipping crustal-scale boundaries along this composite lithospheric transect would appear to preclude subduction as an explanation for seismicity in the VSZ, consistent with abundant surface geologic data. These seismic data advocate possible lower crustal continental lithospheric delamination as a mechanism for generating intermediate depth seismicity in the absence of a plate boundary.

Abrupt changes of intermediate-water oxygen in the northwestern Pacific during the last 27 kyr

NASA Astrophysics Data System (ADS)

Ishizaki, Yui; Ohkushi, Ken'ichi; Ito, Takashi; Kawahata, Hodaka

2009-04-01

An oxygen minimum zone (OMZ) currently exists at intermediate water depths on the northern Japanese margin in the northwestern Pacific. The OMZ results largely from a combination of high surface-water productivity and poor ventilation of intermediate waters. We investigated the late Quaternary history (last 27 kyr) of the intensity of this OMZ using changes in benthic foraminiferal carbon isotopes and assemblages in a sediment core taken on the continental slope off Shimokita Peninsula, northern Japan, at a water depth of 975 m. The core was located well within the region of the present-day OMZ and high surface-water productivity. The benthic foraminiferal δ13C values, which indicate millennial-scale fluctuations of nutrient contents at the sediment-water interface, were 0.48‰ lower during the last glacial maximum (LGM) than during the late Holocene. These results do not indicate the formation of glacial intermediate waters of subarctic Pacific origin, but rather the large contribution of high-nutrient water masses such as the Antarctic Intermediate Water, implying that the regional circulation pattern during the LGM was similar to that of modern times. Benthic foraminiferal assemblages underwent major changes in response to changes in dissolved oxygen concentrations in ocean floor sediments. The lowest oxygen and highest nutrient conditions, marked by dysoxic taxa and negative values of benthic foraminiferal δ13C, occurred during the Bølling/Allerød (B/A) and Pre-Boreal warming events. Dysoxic conditions in this region during these intervals were possibly caused by high surface-water productivity at times of reduced intermediate-water ventilation in the northwestern Pacific. The benthic assemblages show dysoxic events on approx. 100- to 200-year cycles during the B/A, reflecting centennial-scale productivity changes related to freshwater cycles and surface-water circulation in the North Pacific.

Widespread gas hydrate instability on the upper U.S. Beaufort margin

NASA Astrophysics Data System (ADS)

Phrampus, Benjamin J.; Hornbach, Matthew J.; Ruppel, Carolyn D.; Hart, Patrick E.

2014-12-01

The most climate-sensitive methane hydrate deposits occur on upper continental slopes at depths close to the minimum pressure and maximum temperature for gas hydrate stability. At these water depths, small perturbations in intermediate ocean water temperatures can lead to gas hydrate dissociation. The Arctic Ocean has experienced more dramatic warming than lower latitudes, but observational data have not been used to study the interplay between upper slope gas hydrates and warming ocean waters. Here we use (a) legacy seismic data that constrain upper slope gas hydrate distributions on the U.S. Beaufort Sea margin, (b) Alaskan North Slope borehole data and offshore thermal gradients determined from gas hydrate stability zone thickness to infer regional heat flow, and (c) 1088 direct measurements to characterize multidecadal intermediate ocean warming in the U.S. Beaufort Sea. Combining these data with a three-dimensional thermal model shows that the observed gas hydrate stability zone is too deep by 100 to 250 m. The disparity can be partially attributed to several processes, but the most important is the reequilibration (thinning) of gas hydrates in response to significant (~0.5°C at 2σ certainty) warming of intermediate ocean temperatures over 39 years in a depth range that brackets the upper slope extent of the gas hydrate stability zone. Even in the absence of additional ocean warming, 0.44 to 2.2 Gt of methane could be released from reequilibrating gas hydrates into the sediments underlying an area of ~5-7.5 × 103 km2 on the U.S. Beaufort Sea upper slope during the next century.

AmeriFlux US-Me2 Metolius-intermediate aged ponderosa pine

DOE Data Explorer

Law, Bev [Oregon State University

2016-01-01

This is the AmeriFlux version of the carbon flux data for the site US-Me2 Metolius-intermediate aged ponderosa pine. Site Description - The mean stand age is 64 years old and the stand age of the oldest trees is about 100 years old. This site is one of the Metolius cluster sites with different age and disturbance classes and part of the AmeriFlux network (http://ameriflux.ornl.gov/fullsiteinfo.php?sid=88). The overstory is almost exclusively composed of ponderosa pine trees (Pinus ponderosa Doug. Ex P. Laws) with a few scattered incense cedars (Calocedrus decurrens (Torr.) Florin) and has a peak leaf area index (LAI) of 2.8 m2 m-2. Tree height is relatively homogeneous at about 16 m, and the mean tree density is approximately 325 trees ha-1 (Irvine et al., 2008). The understory is sparse with an LAI of 0.2 m2 m-2 and primarily composed of bitterbrush (Purshia tridentate (Push) DC.) and Manzanita (Arctostaphylos patula Greene). Soils at the site are sandy (69%/24%/7% sand/silt/clay at 0–0.2 m depth and 66%/27%/7% at 0.2–0.5 m depth, and 54%/ 35%/11% at 0.5–1.0 m depth), freely draining with a soil depth of approximately 1.5 m (Irvine et al., 2008; Law et al., 2001b; Schwarz et al., 2004).

Late Holocene Radiocarbon Variability in Northwest Atlantic Slope Waters

DOE Office of Scientific and Technical Information (OSTI.GOV)

Sherwood, O; Edinger, E; Guilderson, T P

2008-08-15

Deep-sea gorgonian corals secrete a 2-part skeleton of calcite, derived from dissolved inorganic carbon at depth, and gorgonin, derived from recently fixed and exported particulate organic matter. Radiocarbon contents of the calcite and gorgonin provide direct measures of seawater radiocarbon at depth and in the overlying surface waters, respectively. Using specimens collected from Northwest Atlantic slope waters, we generated radiocarbon records for surface and upper intermediate water layers spanning the pre- and post bomb-{sup 14}C eras. In Labrador Slope Water (LSW), convective mixing homogenizes the pre-bomb {Delta}{sup 14}C signature (-67 {+-} 4{per_thousand}) to at least 1000 m depth. Surface watermore » bomb-{sup 14}C signals were lagged and damped (peaking at {approx} +45{per_thousand} in the early 1980s) relative to other regions of the northwest Atlantic, and intermediate water signals were damped further. Off southwest Nova Scotia, the vertical gradient in {Delta}{sup 14}C is much stronger. In surface water, pre-bomb {Delta}{sup 14}C averaged -75 {+-} 5{per_thousand}. At 250-475 m depth, prebomb {Delta}{sup 14}C oscillated quasi-decadally between -80 and -100{per_thousand}, likely reflecting interannual variability in the presence of Labrador Slope Water vs. Warm Slope Water (WSW). Finally, subfossil corals reveal no systematic changes in vertical {Delta}{sup 14}C gradients over the last 1200 years.« less

Isolated intermediate-depth seismicity north of the Izu peninsula, Japan: implications for subduction of the Philippine Sea Plate

NASA Astrophysics Data System (ADS)

Nakajima, Junichi

2018-01-01

The subduction of the Philippine Sea (PHS) Plate toward the north of Izu peninsula, Japan, is of great interest because intraslab seismicity is absent where the buoyant Izu volcanic arc has been subducting over the past 15 Myr. This study analyzes 42 earthquakes in an isolated seismic cluster that occurred 100 km north of Izu peninsula at depths of 40-90 km and discusses seismogenesis in the context of plate subduction. We picked P- and S-wave arrival times of earthquakes to produce a complete hypocenter catalogue, carried out double-difference event relocations, and then determined focal mechanism solutions of 7 earthquakes from P-wave polarity data. Based on the focal mechanism solution, the largest earthquake (M3.1) is interpreted as a thrust earthquake along the upper surface of the PHS Plate. Locations of other earthquakes relative to the largest event suggest that most earthquakes occur within the subducting PHS Plate. Our results suggest that the PHS Plate north of Izu peninsula has temperatures low enough to facilitate thrust and intraslab earthquakes at depths of 60-90 km. Earthquakes are likely to occur where pore pressures are locally high, which weakens pre-existing faults. The presence of the intermediate-depth seismic cluster indicates the continuous subduction of the PHS Plate toward the north of Izu peninsula without any disruption.[Figure not available: see fulltext.

New method to monitor RF safety in MRI-guided interventions based on RF induced image artefacts.

PubMed

van den Bosch, Michiel R; Moerland, Marinus A; Lagendijk, Jan J W; Bartels, Lambertus W; van den Berg, Cornelis A T

2010-02-01

Serious tissue heating may occur at the tips of elongated metallic structures used in MRI-guided interventions, such as vascular guidewires, catheters, biopsy needles, and brachytherapy needles. This heating is due to resonating electromagnetic radiofrequency (RF) waves along the structure. Since it is hard to predict the exact length at which resonance occurs under in vivo conditions, there is a need for methods to monitor this resonance behavior. In this study, the authors propose a method based on the RF induced image artefacts and demonstrate its applicability in two phantom experiments. The authors developed an analytical model that describes the RF induced image artefacts as a function of the induced current in an elongated metallic structure placed parallel to the static magnetic field. It describes the total RF field as a sum of the RF fields produced by the transmit coil of the MR scanner and by the elongated metallic structure. Several spoiled gradient echo images with different nominal flip angle settings were acquired to map the B1+ field, which is a quantitative measure for the RF distortion around the structure. From this map, the current was extracted by fitting the analytical model. To investigate the sensitivity of our method we performed two phantom experiments with different setup parameters: One that mimics a brachytherapy needle insertion and one that resembles a guidewire intervention. In the first experiment, a short needle was placed centrally in the MR bore to ensure that the induced currents would be small. In the second experiment, a longer wire was placed in an off-center position to mimic a worst case scenario for the patient. In both experiments, a Luxtron (Santa Clara, CA) fiberoptic temperature sensor was positioned at the structure tip to record the temperature. In the first experiment, no significant temperature increases were measured, while the RF image artefacts and the induced currents in the needle increased with the applied insertion depth. The maximum induced current in the needle was 44 mA. Furthermore, a standing wave pattern became clearly visible for larger insertion depths. In the second experiment, significant temperature increases up to 2.4 degrees C in 1 min were recorded during the image acquisitions. The maximum current value was 1.4 A. In both experiments, a proper estimation of the current in the metallic structure could be made using our analytical model. The authors have developed a method to quantitatively determine the induced current in an elongated metallic structure from its RF distortion. This creates a powerful and sensitive method to investigate the resonant behavior of RF waves along elongated metallic structures used for MRI-guided interventions, for example, to monitor the RF safety or to inspect the influence of coating on the resonance length. Principally, it can be applied under in vivo conditions and for noncylindrical metallic structures such as hip implants by taking their geometry into account.

Intermediate-depth earthquakes within young Cocos plate beneath Central Mexico: A hypothesis test for dehydration embrittlement and shear instability

NASA Astrophysics Data System (ADS)

Song, T.

2010-12-01

Subducting slab undergoes a series of dehydration reactions on their ways into the mantle and these processes are responsible for transporting water, recycling volatiles and chemical elements in arc magmas. It is generally accepted that the SOC is hydrated. However, it is not clear if subducting oceanic mantle (SOM) is hydrated and how deep the hydration is. Seismic refraction studies found that normal-fault type faulting can extend 12-20 km deep into the interior of the slab off Nicaragua, suggesting deep hydration of the SOM. Seismic refraction studies also found that the uppermost SOM is seismically slow and is partially serpentinized. The fluids released from dehydration inside the SOM can reduce the normal stress locally and facilitate the occurrences of intra-slab events through dehydration embrittlement and hydraulic fracture. It has been suggested that the dehydration of antigorite at about 600C is particularly important in facilitating the lower plane of the double seismic zone. To link the dehydration process to the occurrences of intra-slab events, it is critical to clarify where these events are located, either located at the dehydration boundary or in the neighborhood rocks. However, if the SOM is anhydrous, other mechanism, such as shear instabilities, has to be invoked to explain the occurrences of intermediate-depth intraslab earthquakes. Here I discuss locations of intermediate-depth intraslab earthquakes in Central Mexico subduction zone, where young Cocos plate subducts beneath North America plate. Recent studies involving local converted wave modeling and receiver function analysis indicate the presence of an ultra-slow velocity layer (USL) of about 3 km thick, likely an over-pressured upper oceanic crust. Most events display anomalously large converted SP waves that are 2-2.5 secs after direct P waves and finite difference modeling converge the location of these events about 9 km below the lower boundary USL. With a lower oceanic crust of about 3-5 km estimated from receiver function, these intermediate-depth earthquakes are about 6 km inside the SOM. There is no clear evidence yet indicating the presence of a partially serpentinized layer in such a young plate (10-15 Ma). Further waveform modeling is undertaken to explore the presence of such a partially serpentinized layer.

Slab Geometry and Deformation in the Northern Nazca Subduction Zone Inferred From The Relocation and Focal mechanisms of Intermediate-Depth Earthquakes

NASA Astrophysics Data System (ADS)

Chang, Y.; Warren, L. M.; Prieto, G. A.

2015-12-01

In the northern Nazca subduction zone, the Nazca plate is subducting to the east beneath the South American Plate. At ~5.6ºN, the subducting plate has a 240-km east-west offset associated with a slab tear, called the Caldas tear, that separates the northern and southern segments. Our study seeks to better define the slab geometry and deformation in the southern segment, which has a high rate of intermediate-depth earthquakes (50-300 km) between 3.6ºN and 5.2ºN in the Cauca cluster. From Jan 2010 to Mar 2014, 228 intermediate-depth earthquakes in the Cauca cluster with local magnitude Ml 2.5-4.7 were recorded by 65 seismic stations of the Colombian National Seismic Network. We review and, if necessary, adjust the catalog P and S wave arrival picks. We use the travel times to relocate the earthquakes using a double difference relocation method. For earthquakes with Ml ≥3.8, we also use waveform modeling to compute moment tensors . The distribution of earthquake relocations shows an ~15-km-thick slab dipping to the SE. The dip angle increases from 20º at the northern edge of the cluster to 38º at the southern edge. Two concentrated groups of earthquakes extend ~40 km vertically above the general downdip trend, with a 20 km quiet gap between them at ~100 km depth. The earthquakes in the general downdip seismic zone have downdip compressional axes, while earthquakes close to the quiet gap and in the concentrated groups have an oblique component. The general decrease in slab dip angle to the north may be caused by mantle flow through the Caldas tear. The seismicity gap in the slab may be associated with an active deformation zone and the concentrated groups of earthquakes with oblique focal mechanisms could be due to a slab fold.

Rheology and Seismic Potential of Experimentally-Deformed Natural Serpentinites

NASA Astrophysics Data System (ADS)

Gasc, J.; Hilairet, N.; Wang, Y.; Yu, T.; Ferrand, T. P.; Schubnel, A.

2016-12-01

The origin of intermediate-depth earthquakes, which occur at depths of 60-300 km along subducting slabs, remains somehow enigmatic. In the pressure and temperature conditions involved, rocks should indeed deform in a ductile fashion. One, or more, mechanism is therefore responsible for mechanical instabilities. Dehydration embrittlement, due to serpentine breakdown, was long considered a good candidate. However, in recent years, experimental studies have challenged this theory, by showing that deformation and faulting of serpentinites, related to dehydration, occurs in a stable and aseismic way (Chernak and Hirth, 2011; Gasc et al., 2011). In order to assess the seismic potential of serpentinites, high pressure deformation experiments were carried out on natural samples, during which micro-seismicity was monitored by recording Acoustic Emissions (AE's). Deformation was performed at pressures of 3-5 GPa, using a Deformation-DIA device, and over a wide range of temperatures, both within and outside antigorite's stability field. The results show that, below 400 C, serpentinite deformation involves aseismic semi-brittle mechanisms, even in cases where strain localization is observed. At high temperature (i.e., above 600 C), despite conditions propitious to dehydration embrittlement (i.e., with fast strain rates and reaction kinetics), joint deformation and dehydration leads to ductile shear, without generation of AE's. On the other hand, a brittle temperature window, centered at ca. 500 C, is evidenced. In this latter case, AE's are consistently collected upon deformation and faulting with extremely sharp strain localization is observed. This brittle field may therefore be a source of seismicity in subducting slabs at mantle pressures. However, analysis of the acoustic signal shows that it is relatively orders of magnitude weaker than its real-earth counterparts, which suggests that other mechanisms are responsible for larger intermediate-depth earthquakes. In fact, recent results on samples composed of antigorite and olivine mixtures (Ferrand et al., under review), show that mechanical instabilities develop upon antigorite dehydration, thus suggesting that the largest intermediate-depth earthquakes arise in partly hydrated peridotites.

Insights Into Intermediate Ocean Barium Cycling From Deep-Sea Bamboo Coral Records on the California Margin

NASA Astrophysics Data System (ADS)

LaVigne, M.; Serrato Marks, G.; Freiberger, M. M.; Miller, H. R.; Hill, T. M.; McNichol, A. P.; Lardie Gaylord, M.

2016-02-01

Dissolved barium (BaSW) has been linked to several biogeochemical processes such as the cycling and export of nutrients, organic carbon (Corg), and barite in surface and intermediate oceans. The dynamic nature of barium cycling in the water column has been demonstrated on short timescales (days-weeks) while sedimentary records have documented geologic-scale changes in barite preservation driven by export production. Our understanding of how inter-annual-decadal scale climate variability impacts these biogeochemical processes currently lacks robust instrumental and paleoceanographic records. Recent work has calibrated and demonstrated the reproducibility of a new BaSW proxy in California Current System (CCS) bamboo corals (Ba/Ca) using a coral depth transect spanning the CCS oxygen minimum zone (792-2055m water depth). New `reconnaissance' radiocarbon data identifying the bomb 14C spike in coral proteinaceous nodes and sclerochronological analyses of calcitic internodes are used to assign chronologies to the CCS coral records. Century-long coral records from 900-1500m record 4-7 year long increases in Ba/Ca ( 10-70 nmol/kg BaSW) at depths where rapid barite cycling occurs on day-weekly timescales. The BaSW peaks punctuate the coral records at different time periods and depths and do not coincide with inter-annual/decadal climate transitions (e.g. ENSO/PDO). Stable surface productivity and coral δ15N records indicate that Corg export from CCS surface waters has been relatively constant over the past century. Thus, the inter-annual scale BaSW peaks recorded by the 900-1500m corals more likely reflect periods of decreased barite formation (and/or increased dissolution) via reduced bacterial Corg respiration or barite saturation state. Paleoceanographic BaSW records and continued research on barium cycling in the modern ocean have the potential to elucidate the mechanisms linking intermediate water carbon and barium cycling, climate, and ocean oxygenation in the past.

Scattering mechanisms in shallow undoped Si/SiGe quantum wells

NASA Astrophysics Data System (ADS)

Laroche, Dominique; Huang, Shih-Hsien; Nielsen, Erik; Chuang, Yen; Li, Jiun-Yun; Liu, Chih-Wen; Lu, Tzu-Ming

We report the magneto-transport and scattering mechanism analysis of a series of increasingly shallow Si/SiGe quantum wells with the shallowest 2DEG located only ~ 10 nm away from the surface. The peak mobility increases with increasing depth, suggesting that charge centers near the oxide/semiconductor interface is the main source of disorder. The power-law exponent of the mobility versus density curve, μ ~nα , is extracted as a function of the depth. At intermediate densities, the power-law dependence is characterized by α ~ 2 . 3 while at the highest achievable densities for devices with intermediate depth, an exponent α ~ 5 is observed. We propose, and show by simulations, that this increase in α is explained by a non-equilibrium model where electrons migrating to the surface smooth out the potential landscape seen by the 2DEG. This work has been supported by the Division of Materials Sciences and Engineering, Office of Basic Energy Sciences, U.S. Department of Energy (DOE). Sandia National Laboratories is a multi program laboratory managed and operated by Sandia Corporation, a wholly owned subsidiary of Lockheed Martin Corporation, for the U.S. DOE's National Nuclear Security Administration under contract DE-AC04-94AL

Application of x-ray nano-particulate markers for the visualization of intermediate layers and interfaces using scanning electron microscopy

NASA Astrophysics Data System (ADS)

Bessudnova, Nadezda O.; Bilenko, David I.; Zakharevich, Andrey M.

2012-03-01

In this study the methodology of biological sample preparation for dental research using SEM/EDX has been elaborated. (1)The original cutting equipment supplied with 3D user-controlled sample fixation and an adjustable cooling system has been designed and evaluated. (2) A new approach to the root dentine drying procedure has been developed to preserve structure peculiarities of root dentine. (3) A novel adhesive system with embedded X-Ray nanoparticulate markers has been designed. (4)The technique allowing for visualization of bonding resins, interfaces and intermediate layers between tooth hard tissues and restorative materials of endodontically treated teeth using the X-ray nano-particulate markers has been developed and approved. These methods and approaches were used to compare the objective depth of penetration of adhesive systems of different generations in root dentine. It has been shown that the depth of penetration in dentine is less for adhesive systems of generation VI in comparison with bonding resins of generation V, which is in agreement with theoretical evidence. The depth of penetration depends on the correlation between the direction of dentinal tubules, bonding resin delivery and gravity.

Noncanonical Radical SAM Enzyme Chemistry Learned from Diphthamide Biosynthesis.

PubMed

Dong, Min; Zhang, Yugang; Lin, Hening

2018-05-10

Radical S-adenosylmethionine (SAM) enzymes are a superfamily of enzymes that use SAM and reduced [4Fe-4S] cluster to generate a 5'-deoxyadenosyl radical to catalyze numerous challenging reactions. We have reported a type of noncanonical radical SAM enzymes in the diphthamide biosynthesis pathway. These enzymes also use SAM and reduced [4Fe-4S] clusters, but generate a 3-amino-3-carboxypropyl (ACP) radical to modify the substrate protein, translation elongation factor 2. The regioselective cleavage of a different C-S bond of the sulfonium center of SAM in these enzymes comparing to canonical radical SAM enzymes is intriguing. Here, we highlight some recent findings in the mechanism of these types of enzymes, showing that the diphthamide biosynthetic radial SAM enzymes bound SAM with a distinct geometry. In this way, the unique iron of the [4Fe-4S] cluster in the enzyme can only attack the carbon on the ACP group to form an organometallic intermediate. The homolysis of the organometallic intermediate releases the ACP radical and generates the EF2 radial.

Biodegradation of imidazolium ionic liquids by activated sludge microorganisms.

PubMed

Liwarska-Bizukojc, Ewa; Maton, Cedric; Stevens, Christian V

2015-11-01

Biological properties of ionic liquids (ILs) have been usually tested with the help of standard biodegradation or ecotoxicity tests. So far, several articles on the identification of intermediate metabolites of microbiological decay of ILs have been published. Simultaneously, the number of novel ILs with unrecognized characteristics regarding biodegradability and effect on organisms and environment is still increasing. In this work, seven imidazolium ionic liquids of different chemical structure were studied. Three of them are 1-alkyl-3-methyl-imidazolium bromides, while the other four are tetra- or completely substituted imidazolium iodides. This study focused on the identification of intermediate metabolites of the aforementioned ionic liquids subjected to biodegradation in a laboratory activated sludge system. Both fully substituted ionic liquids and 1-ethyl-3-methyl-imidazolium bromide were barely biodegradable. In the case of two of them, no biotransformation products were detected. The elongation of the alkyl side chain made the IL more susceptible for microbiological decomposition. 1-Decyl-3-methyl-imidazolium bromide was biotransformed most easily. Its primary biodegradation up to 100 % could be achieved. Nevertheless, the cleavage of the imidazolium ring has not been observed.

Tubular solid oxide fuel cells with porous metal supports and ceramic interconnections

DOEpatents

Huang, Kevin [Export, PA; Ruka, Roswell J [Pittsburgh, PA

2012-05-08

An intermediate temperature solid oxide fuel cell structure capable of operating at from 600.degree. C. to 800.degree. C. having a very thin porous hollow elongated metallic support tube having a thickness from 0.10 mm to 1.0 mm, preferably 0.10 mm to 0.35 mm, a porosity of from 25 vol. % to 50 vol. % and a tensile strength from 700 GPa to 900 GPa, which metallic tube supports a reduced thickness air electrode having a thickness from 0.010 mm to 0.2 mm, a solid oxide electrolyte, a cermet fuel electrode, a ceramic interconnection and an electrically conductive cell to cell contact layer.

Scaling and Instabilities in Bubble Pinch-Off

NASA Astrophysics Data System (ADS)

Burton, J. C.; Waldrep, R.; Taborek, P.

2005-05-01

We have used a 100 000 frame-per-second video to analyze the pinch-off of nitrogen gas bubbles in fluids with a wide range of viscosity. If the external fluid is highly viscous (ηext>100 cP), the bubble neck radius is proportional to the time before break, τ, and decreases smoothly to zero. If the external fluid has low viscosity (ηext<10 cP), the radius scales as τ1/2 until an instability develops in the gas bubble, which causes the neck to rupture and tear apart. Finally, if the viscosity of the external fluid is in an intermediate range, an elongated thread is formed, which breaks apart into micron-sized bubbles.

3D Density Structure of Oceanic Lithosphere Affected by A Plume: A Case Study from the Greater Jan Mayen-East Greenland Region (NE Atlantic)

NASA Astrophysics Data System (ADS)

Tan, P.; Sippel, J.; Breivik, A. J.; Scheck-Wenderoth, M.; Meeßen, C.

2017-12-01

Unraveling the density structure of the oceanic lithosphere north of Iceland is key for understanding the effects of the Iceland Plume on the mid-ocean ridges of the greater Jan Mayen-East Greenland Region. We use a data-integrative approach for 3D gravity modeling to develop new insights into the crust and upper mantle density structure of this region. First, we obtain the 3D density structure of the sediments and crust from interpretations of regional reflection and refraction seismic lines. Then, the temperature and density structure of the mantle between 50 and 250 km are derived from a published shear-wave velocity (Vs) tomography model. To assess the density configuration between the Moho and 50 km depth, we follow a combined forward and inverse 3D gravity modeling approach. The Vs tomography and derived density of the deeper mantle (>50 km depth) reveal that the low-density anomaly related to the Iceland plume gets weaker with increasing distance from the plume, i.e. from the strongly influenced Middle Kolbeinsey Ridge (MKR) to the Mohn's Ridge. The West Jan Mayen Fracture Zone is identified as a main mantle density contrast, indicative of differences in the thermal evolution of the ridge systems it separates. Beneath the MKR region, the low-density anomaly at depths of >50 km continues upwards into the uppermost mantle, where its lateral dimensions narrow considerably. This elongated density anomaly is consistent with a basement high and indicates a channelization of the Iceland plume effects. The NE-SW elongated mantle anomaly does not, however, coincide with the topographical NNE-SSW striking ridge axis. Thus, the modelled plume-affected oceanic lithosphere reveals discrepancies with the half-space cooling model. We discuss the 3D density model in terms of such spatial relations between deeper mantle anomalies and the shallow crustal structure.

Sorted bedforms developed on sandy lobes fed by small ephemeral streams (Catalan continental shelf)

NASA Astrophysics Data System (ADS)

Durán, R.; Guillén, J.; Muñoz, A.; Guerrero, Q.

2016-12-01

The morphology and sedimentological characteristics of sorted bedforms identified in the Catalan continental shelf (NW Mediterranean Sea) have been characterized using multibeam echosounder data and sediment samples collected in 2013 within the FORMED project. Bathymetric data was compared with previous data gathered in 2004 within the ESPACE project to assess the decadal stability of these bedforms. The sorted bedforms were observed on the inner shelf at water depths from 10 to 40 m, along a coastal stretch of more than 3 km. They are associated with elongated patches of low backscatter, corresponding to fine sand. The fine-grained sediment patches are located off small bays fed by short, intermittent streams, extending down to 40 m water depth. The sorted bedforms exhibit elongated shapes with subtle relief (up to 1 m) and are oriented nearly perpendicular to the shoreline. In cross-section, the sorted bedforms display lateral symmetry in bathymetric relief and backscatter, with high backscatter corresponding to poorly sorted coarse sand (median size of 0.55-0.96 mm) centered on the bathymetric depression, and low backscatter consisting of well-sorted fine to medium sand (median sized of 0.22-0.35 mm) on the crest. The local input of well-sorted fine sand supplied by ephemeral streams over the coarse sand domain of the infralittoral prograding wedge contributes to the bed sediment heterogeneity (mixture of sediment), which is further reorganized into sorted bedforms. The sorted bedforms are better developed in deeper waters (20-40 m) than near the shoreline, probably due to stronger wave forcing in the shallower shelf that prevents the maintenance of these morphologies. At a decadal time scale, the morphological evolution of these bedforms indicates that they are persistent features, showing small changes in their boundaries, which is in agreement with previous observations and numerical simulations that highlighted the persistence and long-term stability of sorted bedforms at water depths greater than 15-20 m over annual or even decadal timescales.

SU-F-T-408: On the Determination of Equivalent Squares for Rectangular Small MV Photon Fields

DOE Office of Scientific and Technical Information (OSTI.GOV)

Sauer, OA; Wegener, S; Exner, F

Purpose: It is common practice to tabulate dosimetric data like output factors, scatter factors and detector signal correction factors for a set of square fields. In order to get the data for an arbitrary field, it is mapped to an equivalent square, having the same scatter as the field of interest. For rectangular fields both, tabulated data and empiric formula exist. We tested the applicability of such rules for very small fields. Methods: Using the Monte-Carlo method (EGSnrc-doseRZ), the dose to a point in 10cm depth in water was calculated for cylindrical impinging fluence distributions. Radii were from 0.5mm tomore » 11.5mm with 1mm thickness of the rings. Different photon energies were investigated. With these data a matrix was constructed assigning the amount of dose to the field center to each matrix element. By summing up the elements belonging to a certain field, the dose for an arbitrary point in 10cm depth could be determined. This was done for rectangles up to 21mm side length. Comparing the dose to square field results, equivalent squares could be assigned. The results were compared to using the geometrical mean and the 4Xperimeter/area rule. Results: For side length differences less than 2mm, the difference between all methods was in general less than 0.2mm. For more elongated fields, relevant differences of more than 1mm and up to 3mm for the fields investigated occurred. The mean square side length calculated from both empiric formulas fitted much better, deviating hardly more than 1mm and for the very elongated fields only. Conclusion: For small rectangular photon fields, deviating only moderately from square both investigated empiric methods are sufficiently accurate. As the deviations often differ regarding their sign, using the mean improves the accuracy and the useable elongation range. For ratios larger than 2, Monte-Carlo generated data are recommended. SW is funded by Deutsche Forschungsgemeinschaft (SA481/10-1)« less

Crustal structure between Lake Mead, Nevada, and Mono Lake, California

USGS Publications Warehouse

Johnson, Lane R.

1964-01-01

Interpretation of a reversed seismic-refraction profile between Lake Mead, Nevada, and Mono Lake, California, indicates velocities of 6.15 km/sec for the upper layer of the crust, 7.10 km/sec for an intermediate layer, and 7.80 km/sec for the uppermost mantle. Phases interpreted to be reflections from the top of the intermediate layer and the Mohorovicic discontinuity were used with the refraction data to calculate depths. The depth to the Moho increases from about 30 km near Lake Mead to about 40 km near Mono Lake. Variations in arrival times provide evidence for fairly sharp flexures in the Moho. Offsets in the Moho of 4 km at one point and 2 1/2 km at another correspond to large faults at the surface, and it is suggested that fracture zones in the upper crust may displace the Moho and extend into the upper mantle. The phase P appears to be an extension of the reflection from the top of the intermediate layer beyond the critical angle. Bouguer gravity, computed for the seismic model of the crust, is in good agreement with the measured Bouguer gravity. Thus a model of the crustal structure is presented which is consistent with three semi-independent sources of geophysical data: seismic-refraction, seismic-reflection, and gravity.

Study of dilution, height, and lateral spread of vertical dense jets in marine shallow water.

PubMed

Ahmad, Nadeem; Suzuki, Takayuki

2016-01-01

This study provides information for the design of sea outfalls to dispose of brine from desalination plants into shallow lagoons of the sea. The behavior of vertical dense jets was studied experimentally by discharging cold saline water vertically upward into a tank filled with hot freshwater under stagnant ambient conditions. The minimum return point dilution, μmin, was determined using thermocouples, and the maximum height, Z(m), and the lateral spread, R(sp), of the fountains were determined by observing shadowgraph pictures. The flow was turbulent and the densimetric Froude number Fr(0) varied from 9 to 18.8. Three mixing regimes were identified: deep, intermediate, and impinging mixing regimes. In the intermediate mixing regime, μ(min) and Z(m) were analyzed and compared with the results of deep water studies. The μ(min) and Z(m) values of fountains at an intermediate water depth were found to be higher than those of fountains at deep water depths. In the impinging regime, μ(min) decreases rapidly when a fountain starts to continuously impinge on the water surface, showing a noticeable disturbance in the water surface. Therefore, a good rule of thumb is to reduce the flow through multiport diffusers from desalination plants when the noticeable disturbance is observed from the top water surface.

Proposed Drill Sites

DOE Data Explorer

Lane, Michael

2013-06-28

Proposed drill sites for intermediate depth temperature gradient holes and/or deep resource confirmation wells. Temperature gradient contours based on shallow TG program and faults interpreted from seismic reflection survey are shown, as are two faults interpreted by seismic contractor Optim but not by Oski Energy, LLC.

Variations in Depth and Chemical Composition of Groundwater During an Interval in Intermittent Water Delivery.

PubMed

Yongjin, Chen; Weihong, Li; Jiazhen, Liu; Ming, Lu; Mengchen, Xu; Shengliang, Liu

2015-08-01

Based on monitoring data collected from 2006 to 2009 at the lower reaches of the Tarim River, tempo-spatial variations in groundwater depth and chemistry during an approximately 3-year interval of intermittent water delivery were studied. Results indicate that as the groundwater depth increased at the upper sector of the river's lower reaches from March 2007 to September 2009, so too did the main chemical composition of groundwater. Groundwater depth at the intermediate sector also increased, but major ions in groundwater declined. The groundwater depth at the lower sector started to decrease in August 2008, and the concentrations of main ions in the groundwater generally rose and fell along with the variations in groundwater depth. The groundwater depth and chemistry in the monitoring wells located at a distance from the aqueduct expressed complex changes at different sections. For instance, at the section near the Daxihaizi Reservoir Section B, groundwater depth increased gradually, but chemical composition changed little. In contrast, the groundwater depth of monitoring wells far from the Daxihaizi Reservoir (Section I) decreased and salt content in the groundwater increased. In sectors at a moderate distance from the reservoir, groundwater depth decreased and concentrations of main ions significantly increased.

Depth dependent stress revealed by aftershocks

NASA Astrophysics Data System (ADS)

Narteau, C.; Shebalin, P.

2017-12-01

Aftershocks occur in response to perturbations of the state of stress induced either by earthquakes or human activities. Along major strike-slip fault segments of the San Andreas fault system, the time-delay before the onset of the power-law aftershock decay rate (the c-value) varies by three orders of magnitude in the first twenty kilometers below the surface. Despite the influence of the lithostatic stress, there is no continuous change in c-value with respect to depth. Instead, two decay phases are separated by an abrupt increase at an intermediate depth range of 2 to 5 km. This transitional regime is the only one observed in fluid-injection-induced seismic areas. This provides strong evidence for the role of fluid and a porosity reduction mechanism at depth of few kilometers in active fault zones. Aftershock statistics can then be used to predict the evolution the differential shear stress with depth until the brittle-ductile transition is reached.

Upper mantle electrical conductivity for seven subcontinental regions of the Earth

USGS Publications Warehouse

Campbell, W.H.; Schiffmacher, E.R.

1988-01-01

Spherical harmonic analysis coefficients of the external and internal parts of the quiet-day geomagnetic field variations (Sq) separated for the 7 continental regions of the observatories have been used to determine conductivity profiles to depths of about 600 km by the Schmucker equivalent substitute conductor method. The profiles give evidence of increases in conductivity between about 150 and 350 km depth, then a general increase in conductivity thereafter. For South America we found a high conductivity at shallow depths. The European profile showed a highly conducting layer near 125 km. At the greater depths, Europe, Australia and South America had the lowest values of conductivity. North America and east Asia had intermediate values whereas the African and central Asian profiles both showed the conductivities rising rapidly beyond 450 km depth. The regional differences indicate that there may be considerable lateral heterogeneity of electrical conductivity in the Earth's upper mantle. -Authors

Mechanism of papain-catalyzed synthesis of oligo-tyrosine peptides.

PubMed

Mitsuhashi, Jun; Nakayama, Tsutomu; Narai-Kanayama, Asako

2015-01-01

Di-, tri-, and tetra-tyrosine peptides with angiotensin I-converting enzyme inhibitory activity were synthesized by papain-catalyzed polymerization of L-tyrosine ethyl ester in aqueous media at 30 °C. Varying the reaction pH from 6.0 to 7.5 and the initial concentration of the ester substrate from 25 to 100 mM, the highest yield of oligo-tyrosine peptides (79% on a substrate basis) was produced at pH 6.5 and 75 mM, respectively. In the reaction initiated with 100 mM of the substrate, approx. 50% yield of insoluble, highly polymerized peptides accumulated. At less than 15 mM, the reaction proceeded poorly; however, from 30 mM to 120 mM a dose-dependent increase in the consumption rate of the substrate was observed with a sigmoidal curve. Meanwhile, each of the tri- and tetra-tyrosine peptides, even at approx. 5mM, was consumed effectively by papain but was not elongated to insoluble polymers. For deacylation of the acyl-papain intermediate through which a new peptide bond is made, L-tyrosine ethyl ester, even at 5mM, showed higher nucleophilic activity than di- and tri-tyrosine. These results indicate that the mechanism through which papain polymerizes L-tyrosine ethyl ester is as follows: the first interaction between papain and the ester substrate is a rate-limiting step; oligo-tyrosine peptides produced early in the reaction period are preferentially used as acyl donors, while the initial ester substrate strongly contributes as a nucleophile to the elongation of the peptide product; and the balance between hydrolytic fragmentation and further elongation of oligo-tyrosine peptides is dependent on the surrounding concentration of the ester substrate. Copyright © 2015 Elsevier Inc. All rights reserved.

Isolation of amino acid activating subunit-pantetheine protein complexes: Their role in chain elongation in tyrocidine synthesis

PubMed Central

Lee, Sung G.; Lipmann, Fritz

1977-01-01

Dissociation of the multienzymes of tyrocidine synthesis by prolonged incubation of crude extracts of Bacillus brevis (Dubos strain, ATCC 8185) has yielded, on Sephadex G-100 chromatography, two fractions of amino acid activating subunits, a larger one of 70,000 daltons and a smaller one of 90,000 daltons; the latter was a complex consisting of the 70,000 dalton subunit and the pantetheine-carrying protein of about 20,000 daltons. When it dissociated, the intermediate enzyme, which activates three amino acids, contained two-thirds of the subunits in the 70,000 dalton and one-third in the 90,000 dalton fraction; the heavy enzyme, which activates six amino acids, contained five-sixths of the subunits in the former fraction and one-sixth in the latter. Both fractions showed ATP-PPi exchange with all amino acids that are activated by the respective polyenzymes. With proline as an example, the 70,000 dalton subunit exhibited a single low-affinity binding site, which should correspond to the peripheral thiol acceptor site, whereas the 90,000 dalton subunit showed both a low-affinity binding site and an additional high-affinity site for proline; the high-affinity site is attributed to the pantetheine present on the pantetheine-carrying protein, and suggests that amino acids are translocated from the peripheral SH to the pantetheine-carrying moiety during chain elongation. This was confirmed by the observation that the 90,000 dalton complex, when incubated with the light enzyme in the presence of phenylalanine and proline, produced DPhe-Pro dipeptide that cyclized into DPhe-Pro diketopiperazine, but the 70,000 dalton activating subunit, when similarly incubated, did not. After subunit dissociation, however, no further elongation occurred after the transfer from phenylalanine to proline. Images PMID:196286

Magmatic arc structure around Mount Rainier, WA, from the joint inversion of receiver functions and surface wave dispersion

NASA Astrophysics Data System (ADS)

Obrebski, Mathias; Abers, Geoffrey A.; Foster, Anna

2015-01-01

The deep magmatic processes in volcanic arcs are often poorly understood. We analyze the shear wave velocity (VS) distribution in the crust and uppermost mantle below Mount Rainier, in the Cascades arc, resolving the main velocity contrasts based on converted phases within P coda via source normalization or receiver function (RF) analysis. To alleviate the trade-off between depth and velocity, we use long period phase velocities (25-100 s) obtained from earthquake surface waves, and at shorter period (7-21 s) we use seismic noise cross correlograms. We use a transdimensional Bayesian scheme to explore the model space (VS in each layer, number of interfaces and their respective depths, level of noise on data). We apply this tool to 15 broadband stations from permanent and Earthscope temporary stations. Most results fall into two groups with distinctive properties. Stations east of the arc (Group I) have comparatively slower middle-to-lower crust (VS = 3.4-3.8 km/s at 25 km depth), a sharp Moho and faster uppermost mantle (VS = 4.2-4.4 km/s). Stations in the arc (Group II) have a faster lower crust (VS = 3.7-4 km/s) overlying a slower uppermost mantle (VS = 4.0-4.3 km/s), yielding a weak Moho. Lower crustal velocities east of the arc (Group I) most likely represent ancient subduction mélanges mapped nearby. The lower crust for Group II ranges from intermediate to felsic. We propose that intermediate-felsic to felsic rocks represent the prearc basement, while intermediate composition indicates the mushy andesitic crustal magmatic system plus solidified intrusion along the volcanic conduits. We interpret the slow upper mantle as partial melt.

Differential soil water sourcing of managed Loblolly Pine and Sweet Gum revealed by stable isotopes in the Upper Coastal Plain, USA

NASA Astrophysics Data System (ADS)

Brockman, L. E.; Younger, S. E.; Jackson, C. R.; McDonnell, J.; Janzen, K. F.

2017-12-01

Stable isotope signatures of stem water can illuminate where in the soil profile different types of trees are accessing soil water and thereby contribute to our understanding of water movement through the soil plant atmosphere continuum. The objective of this study was to use 2H and 18O isotopes to characterize water sources of fourteen-year-old intensively managed Loblolly Pine and Sweet Gum stands in replicated (n=3) paired plots. In order to differentiate the isotopic signatures of tree and soil water, both species and five soil depths were sampled monthly for one year. Tree sap and soil water were extracted cryogenically and their isotopic signatures were determined. Although plant water uptake is generally considered a non-fractionating process, our dataset suggests a source of fractionation in 2H signatures in both species and during most of the thirteen sampling events. As a result, only the 18O isotopic data were used to determine the vertical distribution of soil water contributions to stem water. Statistically, we grouped the five soil sampling depths into three isotopic horizons. Shallow, intermediate and deep soil represent sampling depths of 0-10cm, 30-70cm and 100-125cm, respectively. These isotopic horizons were used in a direct inference approach and Bayesian mixing model analysis to determine the origin of stem water. In this study, Loblolly Pine used more water from intermediate and deep soil while Sweet Gum used more water from shallow and intermediate soil. In the winter months, January through March, Loblolly Pine transpired primarily deep soil where as Sweet Gum mainly utilized shallow soil for transpiration. These results indicate that both species have opportunistic water use patterns with seasonal variation.

Widespread gas hydrate instability on the upper U.S. Beaufort margin

USGS Publications Warehouse

Phrampus, Benjamin J.; Hornbach, Matthew J.; Ruppel, Carolyn D.; Hart, Patrick E.

2014-01-01

The most climate-sensitive methane hydrate deposits occur on upper continental slopes at depths close to the minimum pressure and maximum temperature for gas hydrate stability. At these water depths, small perturbations in intermediate ocean water temperatures can lead to gas hydrate dissociation. The Arctic Ocean has experienced more dramatic warming than lower latitudes, but observational data have not been used to study the interplay between upper slope gas hydrates and warming ocean waters. Here we use (a) legacy seismic data that constrain upper slope gas hydrate distributions on the U.S. Beaufort Sea margin, (b) Alaskan North Slope borehole data and offshore thermal gradients determined from gas hydrate stability zone thickness to infer regional heat flow, and (c) 1088 direct measurements to characterize multidecadal intermediate ocean warming in the U.S. Beaufort Sea. Combining these data with a three-dimensional thermal model shows that the observed gas hydrate stability zone is too deep by 100 to 250 m. The disparity can be partially attributed to several processes, but the most important is the reequilibration (thinning) of gas hydrates in response to significant (~0.5°C at 2σ certainty) warming of intermediate ocean temperatures over 39 years in a depth range that brackets the upper slope extent of the gas hydrate stability zone. Even in the absence of additional ocean warming, 0.44 to 2.2 Gt of methane could be released from reequilibrating gas hydrates into the sediments underlying an area of ~5–7.5 × 103 km2 on the U.S. Beaufort Sea upper slope during the next century.

Earthquakes and strain in subhorizontal slabs

NASA Astrophysics Data System (ADS)

Brudzinski, Michael R.; Chen, Wang-Ping

2005-08-01

Using an extensive database of fault plane solutions and precise locations of hypocenters, we show that the classic patterns of downdip extension (DDE) or downdip compression (DDC) in subduction zones deteriorate when the dip of the slab is less than about 20°. This result is depth-independent, demonstrated by both intermediate-focus (depths from 70 to 300 km) and deep-focus (depths greater than 300 km) earthquakes. The absence of pattern in seismic strain in subhorizontal slabs also occurs locally over scales of about 10 km, as evident from a detailed analysis of a large (Mw 7.1) earthquake sequence beneath Fiji. Following the paradigm that a uniform strain of DDE/DDC results from sinking of the cold, dense slab as it encounters resistance from the highly viscous mantle at depth, breakdown of DDE/DDC in subhorizontal slabs reflects waning negative buoyancy ("slab pull") in the downdip direction. Our results place a constraint on the magnitude of slab pull that is required to dominate over localized sources of stress and to align seismic strain release in dipping slabs. Under the condition of a vanishing slab pull, eliminating the only obvious source of regional stress, the abundance of earthquakes in subhorizontal slabs indicates that a locally variable source of stress is both necessary and sufficient to sustain the accumulation of elastic strain required to generate intermediate- and deep-focus seismicity. Evidence is growing that the process of seismogenesis under high pressures, including localized sources of stress, is tied to the presence of petrologic anomalies.

Geologic and geophysical data for wells drilled at Raft River Valley, Cassia County, Idaho, in 1977-1978 and data for wells drilled previously

USGS Publications Warehouse

Nathenson, Manuel; Urban, Thomas C.; Covington, Harry R.

2014-01-01

For purposes of defining the thermal anomaly for the geothermal system, temperature gradients are calculated over long depth intervals on the basis of the appearance of reasonable linear segments on a temperature versus plot depth.  Temperature versus depth data for some drill holes can be represented by a single gradient, whereas others require multiple gradients to match the data.  Data for some drill holes clearly reflect vertical flows of water in the formation surrounding the drill holes, and water velocities are calculated for these drill holes.  Within The Narrows area, temperature versus depth data show reversals at different depth in different drill holes.  In the main thermal area, temperatures in intermediate-depth drill holes vary approximately linearly but with very high values of temperature gradient.  Temperature gradients on a map of the area can be reasonable divided into a large area of regional gradients and smaller areas defining the thermal anomalies.

Paleo-Productivity across the Paleocene-Eocene Thermal Maximum, Walvis Ridge Transect (ODP Sites 1262, 1263, and 1266)

NASA Astrophysics Data System (ADS)

Chun, C. O.; Delaney, M. L.; Zachos, J. C.

2005-12-01

Walvis Ridge transect (Ocean Drilling Program (ODP) Leg 208) provides the first high-resolution depth-transect of deep-sea sediments recovered from the south Atlantic across the P/E boundary. A geographically restricted depth transect (~ 2.2 km, water depths between 2500 and 4770 m) allows us to constrain the surface waters by assuming marine productivity conditions in the overlying water column are similar across all sites. The sediment record will reveal variations for processes that are water-depth dependent. We use the geochemical tracers; biogenic barium, phosphorus, calcium carbonate, and the redox sensitive trace elements manganese and uranium, to reconstruct nutrient burial, paleoproductivity, and bottom water redox chemistry across the Paleocene-Eocene Thermal Maximum (PETM). We calculate our concentrations on a calcium carbonate-free basis to account for dilution by non-carbonate sediments. Trace metal enrichment factors (EFs) are calculated relative to bulk crustal averages. We chose three sites from the depth transect: the shallowest (Site 1263, 2717 m water depth), an intermediate site (Site 1266, 3798 m water depth), and the deepest site (Site 1262, 4755 m water depth). We sampled each site at a sample resolution of ~ 1-2 kyr for 5 m.y. centered at 55 Ma. Uranium EFs at the shallow site exhibits values ~ 5 pre-event and drop to values near crustal averages during and after the carbon isotope excursion (CIE). No dramatic changes in U EFs across the P/E boundary are recorded at the deep and intermediate sites. Mn EFs range between 2.9 -8.6 prior to the event across all three sites, suggesting an oxygenated depositional environment. At the boundary, Mn EFs drop to crustal averages at all sites, then gradually return to pre-event values, indicating more reducing environments during the CIE, a possible explanation for the benthic extinction event (BEE) observed across this transect. Ba excess and reactive phosphorus exhibit decreased concentrations during the CIE with gradual return to pre-event values at the shallowest and deepest sites. We will compare the paleo-productivity and redox chemistry response at the Walvis Ridge sites across the PETM.

Estimation of the intrinsic absorption and scattering attenuation in Northeastern Venezuela (Southeastern Caribbean) using coda waves

USGS Publications Warehouse

Ugalde, A.; Pujades, L.G.; Canas, J.A.; Villasenor, A.

1998-01-01

Northeastern Venezuela has been studied in terms of coda wave attenuation using seismograms from local earthquakes recorded by a temporary short-period seismic network. The studied area has been separated into two subregions in order to investigate lateral variations in the attenuation parameters. Coda-Q-1 (Q(c)-1) has been obtained using the single-scattering theory. The contribution of the intrinsic absorption (Q(i)-1) and scattering (Q(s)-1) to total attenuation (Q(t)-1) has been estimated by means of a multiple lapse time window method, based on the hypothesis of multiple isotropic scattering with uniform distribution of scatterers. Results show significant spatial variations of attenuation: the estimates for intermediate depth events and for shallow events present major differences. This fact may be related to different tectonic characteristics that may be due to the presence of the Lesser Antilles subduction zone, because the intermediate depth seismic zone may be coincident with the southern continuation of the subducting slab under the arc.

Subsurface temperature data in Jemez Mountains, New Mexico. Circular 151

DOE Office of Scientific and Technical Information (OSTI.GOV)

Reiter, M.; Weidman, C.; Edwards, C.L.

1976-01-01

Temperature data taken in 13 drill tests around the Valles Caldera are presented. Seven of these tests were shallow auger holes (less than approximately 30m), 4 were rotary holes of intermediate depth (140 m to 170 m), and 2 were relatively deep tests (350 m and 730 m). Heat-flow measurements were obtained in the 4 intermediate drill tests whereas only geothermal gradients were measured in the remaining tests. Potential ground-water movement, lack of good thermal conductivity control, and the shallow depth of many of the drill tests makes the heat-flow pattern in the area uncertain. Two trends appear likely: highermore » heat flows are to the western side of the Valles Caldera (as opposed to the eastern side) and heat flows increase rapidly in approaching the margin of the Valles Caldera from the west. Both observations suggest a relatively shallow heat source located beneath the western part of the Valles Caldera.« less

Dehydration-driven stress transfer triggers intermediate-depth earthquakes

DOE Office of Scientific and Technical Information (OSTI.GOV)

Ferrand, Thomas P.; Hilairet, Nadège; Incel, Sarah

Intermediate-depth earthquakes (30–300 km) have been extensively documented within subducting oceanic slabs, but their mechanics remains enigmatic. Here in this paper we decipher the mechanism of these earthquakes by performing deformation experiments on dehydrating serpentinized peridotites (synthetic antigorite-olivine aggregates, minerals representative of subduction zones lithologies) at upper mantle conditions. At a pressure of 1.1 gigapascals, dehydration of deforming samples containing only 5 vol% of antigorite suffices to trigger acoustic emissions, a laboratory-scale analogue of earthquakes. At 3.5 gigapascals, acoustic emissions are recorded from samples with up to 50 vol% of antigorite. Experimentally produced faults, observed post-mortem, are sealed by fluid-bearingmore » micro-pseudotachylytes. Microstructural observations demonstrate that antigorite dehydration triggered dynamic shear failure of the olivine load-bearing network. These laboratory analogues of intermediatedepth earthquakes demonstrate that little dehydration is required to trigger embrittlement. We propose an alternative model to dehydration-embrittlement in which dehydration-driven stress transfer, rather than fluid overpressure, causes embrittlement.« less

Dehydration-driven stress transfer triggers intermediate-depth earthquakes

DOE PAGES

Ferrand, Thomas P.; Hilairet, Nadège; Incel, Sarah; ...

2017-05-15

Intermediate-depth earthquakes (30–300 km) have been extensively documented within subducting oceanic slabs, but their mechanics remains enigmatic. Here in this paper we decipher the mechanism of these earthquakes by performing deformation experiments on dehydrating serpentinized peridotites (synthetic antigorite-olivine aggregates, minerals representative of subduction zones lithologies) at upper mantle conditions. At a pressure of 1.1 gigapascals, dehydration of deforming samples containing only 5 vol% of antigorite suffices to trigger acoustic emissions, a laboratory-scale analogue of earthquakes. At 3.5 gigapascals, acoustic emissions are recorded from samples with up to 50 vol% of antigorite. Experimentally produced faults, observed post-mortem, are sealed by fluid-bearingmore » micro-pseudotachylytes. Microstructural observations demonstrate that antigorite dehydration triggered dynamic shear failure of the olivine load-bearing network. These laboratory analogues of intermediatedepth earthquakes demonstrate that little dehydration is required to trigger embrittlement. We propose an alternative model to dehydration-embrittlement in which dehydration-driven stress transfer, rather than fluid overpressure, causes embrittlement.« less

Seismicity Structure of the Downgoing Nazca Slab in Northern Chile

NASA Astrophysics Data System (ADS)

Sippl, C.; Schurr, B.

2017-12-01

We applied an automatized earthquake detection and location algorithm to 8 years of continuous seismic data from the IPOC network in Northern Chile, located in the forearc between about 18.5°S and 24°S. The resulting seismicity catalog contains more than 113k double-difference relocated earthquake hypocenters and features a completeness magnitude around 2.8. Despite the occurrence of two megathrust earthquakes with vigorous aftershock seismicity in the studied time period (the 2007 Tocopilla and the 2014 Iquique earthquakes), >60% of the retrieved seismicity is located in a highly active band of intermediate-depth earthquakes (80-120 km deep) within the downgoing Nazca slab.We obtain a triple seismic zone in the updip part of the slab, with the three parallel dipping planes corresponding to the plate interface, the oceanic Moho (ca. 8 km below the interface) and a third band in the mantle lithosphere 26-28 km beneath the slab top. The plate interface seismicity terminates abruptly at a depth of 55 km. At about 80-90 km depth, the remaining two planes of seismicity then merge into the single, 20 km thick cluster of vigorous seismicity mentioned above, which terminates at 120 km depth. This cluster is located directly beneath the volcanic arc and shows a pronounced kink in the slab dipping angle. Intra-slab seismicity is most likely related to metamorphic dehydration reactions, hence our high-resolution earthquake distribution can be considered a map of metamorphic reactions (although a possibly incomplete one, since not all reactions necessarily invoke seismicity). By correlating this distribution with isotherms from thermal models as well as geophysical imaging results from previous studies, we attempt to get a glimpse at the processes that produce the different patches of intraslab seismicity at intermediate depths.

A Survey of Escherichia coli and Salmonella in the Hyporheic Zone of a Subtropical Stream: Their Bacteriological, Physicochemical and Environmental Relationships

PubMed Central

Mugnai, Riccardo; Sattamini, Ana; Albuquerque dos Santos, José Augusto; Regua-Mangia, Adriana Hamond

2015-01-01

The Hyporheic Zone is among the most important interstitial freshwater habitats, but the relationship between biotic and abiotic factors in this zone remains under-explored. Enterobacteria were expected to be present, but no specific studies had ever confirmed this prediction. The aim of this study was, therefore, to evaluate the total coliforms, Escherichia coli and Salmonella spp. in hyporheic water and to determine the relationship of the physical, chemical and environmental factors at different depths in a rainforest stream. To this end, thirty-six water samples were collected at three depths in sites located in the first, second and third orders in diverse substrates. The total coliforms, Escherichia coli and Salmonella sp. were evaluated in terms of their CFU/ml. In the interstitial samples, coliforms were detected in 100% of the samples. The total coliform counts had higher values at intermediate depths, while E. coli and Salmonella spp. instead had higher values at intermediate and large depths, often reaching or exceeding the values of the surface samples. Our results revealed that Salmonella spp. and the coliforms have different microhabitat preferences. Salmonella spp. and coliform species prefer deposition areas, such as lateral sides of pools, curves and bars, but they have a tendency to distribute into different depths, likely due to temperature differences. Salmonella spp. prefer compact substrata, with fewer fluids passing through and with upwelling areas with lower oxygen inflow. The coliform species showed the opposite preference. Our results suggest that bacterial variation is related to environmental factors and physical-chemical parameters within the HZ and may play a key role in the microbial diversity and distribution in these ecosystems. PMID:26067288

Double diameter boring tool

DOEpatents

Ashbaugh, F.A.; Murry, K.R.

1986-02-10

A boring tool and a method of operation are provided for boring two concentric holes of precision diameters and depths in a single operation. The boring tool includes an elongated tool body, a shank for attachment to a standard adjustable boring head which is used on a manual or numerical control milling machine and first and second diametrically opposed cutting flutes formed for cutting in opposite directions. The diameter of the elongated tool body is substantially equal to the distance from the first flute tip to the axis of rotation plus the distance from the second flute tip to the axis of rotation. The axis of rotation of the tool is spaced from the tool centerline a distance substantially equal to one-half the distance from the second flute tip to the axis of rotation minus one-half the distance from the first flute tip to the axis of rotation. The method includes the step of inserting the boring tool into the boring head, adjusting the distance between the tool centerline and the tool axis of rotation as described above and boring the two concentric holes.

Experimental and Theoretical Approaches for the Surface Interaction between Copper and Activated Sludge Microorganisms at Molecular Scale

NASA Astrophysics Data System (ADS)

Luo, Hong-Wei; Chen, Jie-Jie; Sheng, Guo-Ping; Su, Ji-Hu; Wei, Shi-Qiang; Yu, Han-Qing

2014-11-01

Interactions between metals and activated sludge microorganisms substantially affect the speciation, immobilization, transport, and bioavailability of trace heavy metals in biological wastewater treatment plants. In this study, the interaction of Cu(II), a typical heavy metal, onto activated sludge microorganisms was studied in-depth using a multi-technique approach. The complexing structure of Cu(II) on microbial surface was revealed by X-ray absorption fine structure (XAFS) and electron paramagnetic resonance (EPR) analysis. EPR spectra indicated that Cu(II) was held in inner-sphere surface complexes of octahedral coordination with tetragonal distortion of axial elongation. XAFS analysis further suggested that the surface complexation between Cu(II) and microbial cells was the distorted inner-sphere coordinated octahedra containing four short equatorial bonds and two elongated axial bonds. To further validate the results obtained from the XAFS and EPR analysis, density functional theory calculations were carried out to explore the structural geometry of the Cu complexes. These results are useful to better understand the speciation, immobilization, transport, and bioavailability of metals in biological wastewater treatment plants.

Double diameter boring tool

DOEpatents

Ashbaugh, Fred N.; Murry, Kenneth R.

1988-12-27

A boring tool and a method of operation are provided for boring two concentric holes of precision diameters and depths in a single operation. The boring tool includes an elongated tool body, a shank for attachment to a standard adjustable boring head which is used on a manual or numerical control milling machine and first and second diametrically opposed cutting edges formed for cutting in opposite directions. The diameter of the elongated tool body is substantially equal to the distance from the first cutting edge tip to the axis of rotation plus the distance from the second cutting edge tip to the axis of rotation. The axis of rotation of the tool is spaced from the tool centerline a distance substantially equal to one-half the distance from the second cutting edge tip to the axis of rotation minus one-half the distance from the first cutting edge tip to the axis of rotation. The method includes the step of inserting the boring tool into the boring head, adjusting the distance between the tool centerline and the tool axis of rotation as described above and boring the two concentric holes.

Double diameter boring tool

DOE Office of Scientific and Technical Information (OSTI.GOV)

Ashbaugh, F.A.; Murry, K.R.

A boring tool and a method of operation are provided for boring two concentric holes of precision diameters and depths in a single operation. The boring tool includes an elongated tool body, a shank for attachment to a standard adjustable boring head which is used on a manual or numerical control milling machine and first and second diametrically opposed cutting flutes formed for cutting in opposite directions. The diameter of the elongated tool body is substantially equal to the distance from the first flute tip to the axis of rotation plus the distance from the second flute tip to themore » axis of rotation. The axis of rotation of the tool is spaced from the tool centerline a distance substantially equal to one-half the distance from the second flute tip to the axis of rotation minus one-half the distance from the first flute tip to the axis of rotation. The method includes the step of inserting the boring tool into the boring head, adjusting the distance between the tool centerline and the tool axis of rotation as described above and boring the two concentric holes.« less

Physical determinants of phytoplankton production, algal stoichiometry, and vertical nutrient fluxes.

PubMed

Jäger, Christoph G; Diehl, Sebastian; Emans, Maximilian

2010-04-01

Most phytoplankters face opposing vertical gradients in light versus nutrient supplies but have limited capacities for vertical habitat choice. We therefore explored a dynamical model of negatively buoyant algae inhabiting a one-dimensional water column to ask how water column depth and turbulence constrain total (areal) phytoplankton biomass. We show that the population persistence boundaries in water column depth-turbulence space are set by sinking losses and light limitation but that nutrients are most limiting to total biomass in water columns that are neither too shallow or too weakly mixed (where sinking losses prevail) nor too deep and turbulent (where light limitation prevails). In shallow waters, the most strongly limiting process is nutrient influx to the bottom of the water column (e.g., from sediments). In deep waters, the most strongly limiting process is turbulent upward transport of nutrients to the photic zone. Consequently, the highest total biomasses are attained in turbulent waters at intermediate water column depths and in deep waters at intermediate turbulences. These patterns are insensitive to the assumption of fixed versus flexible algal carbon-to-nutrient stoichiometry, and they arise irrespective of whether the water column is a surface layer above a deep water compartment or has direct contact with sediments.

Facilitation of intermediate-depth earthquakes by eclogitization-related stresses and H2O

NASA Astrophysics Data System (ADS)

Nakajima, J.; Uchida, N.; Hasegawa, A.; Shiina, T.; Hacker, B. R.; Kirby, S. H.

2012-12-01

Generation of intermediate-depth earthquakes is an ongoing enigma because high lithostatic pressures render ordinary dry frictional failure unlikely. A popular hypothesis to solve this conundrum is fluid-related embrittlement (e.g., Kirby et al., 1996; Preston et al., 2003), which is known to work even for dehydration reactions with negative volume change (Jung et al., 2004). One consequence of reaction with the negative volume change is the formation of a paired stress field as a result of strain compatibility across the reaction front (Hacker, 1996; Kirby et al., 1996). Here we analyze waveforms of a tiny seismic cluster in the lower crust of the downgoing Pacific plate at a depth of 155 km and propose new evidence in favor of this mechanism: tensional earthquakes lying 1 km above compressional earthquakes, and earthquakes with highly similar waveforms lying on well-defined planes with complementary rupture areas. The tensional stress is interpreted to be caused by the dimensional mismatch between crust transformed to eclogite and underlying untransformed crust, and the earthquakes are interpreted to be facilitated by fluid produced by eclogitization. These observations provide seismic evidence for the dual roles of volume-change related stresses and fluid-related embrittlement as viable processes for nucleating earthquakes in downgoing oceanic lithosphere.

The impact of intermediate care services on job satisfaction, skills and career development opportunities.

PubMed

Nancarrow, Susan

2007-07-01

The purpose of this study was to examine, in depth, the impact of intermediate care services on staff job satisfaction, skills development and career development opportunities. Recruitment and retention difficulties present a major barrier to the effective delivery of intermediate care services in the UK. The limited existing literature is contradictory, but points to the possibility of staff deskilling and suggests that intermediate care is poorly understood and may be seen by other practitioners as being of lower status than hospital work. These factors have the potential to reduce staff morale and limit the possibilities of recruiting staff. The research is based on interviews with 26 staff from case studies of two intermediate care services in South Yorkshire. Participants reported high levels of job satisfaction, which was because of the enabling philosophy of care, increased autonomy, the setting of care and the actual teams within which the workers were employed. For most disciplines, intermediate care facilitated the application of existing skills in a different way; enhancing some skills, while restricting the use of others. Barriers to career development opportunities were attributed to the relative recency of intermediate care services, small size of the services and lack of clear career structures. Career development opportunities in intermediate care could be improved through staff rotations through acute, community and intermediate care to increase their awareness of the roles of intermediate care staff. The non-hierarchical management structures limits management career development opportunities, instead, there is a need to enhance professional growth opportunities through the use of consultant posts and specialization within intermediate care. This study provides insight into the impact of an increasingly popular model of care on the roles and job satisfaction of workers and highlights the importance of this learning for recruitment and retention of staff.

Nataliella marcelli n. g., n. sp. (Cestoda: Trypanorhyncha: Rhinoptericolidae) from Hawaiian fishes.

PubMed

Palm, Harry W

2010-02-01

A new trypanorhynch cestode from Hawaiian waters is described based on specimens in the collection of the Meguro Parasitological Museum, Tokyo, and newly collected specimens. Nataliella marcelli n. g., n. sp. is characterised by its elongate, craspedote scolex with four small, ear-shaped bothria, an elongate pars vaginalis and long bulbs. The homeoacanthous homeomorphous metabasal armature is comprised of five or six slender, solid hooks per half spiral row. A distinctive basal armature is present, including a combination of six characteristically shaped macrohooks not previously described for trypanorhynchs. The surface ultrastructure consists of gladiate spiniform microtriches that cover the distal and proximal bothrial surface and filiform microtriches on the scolex peduncle. The adults are not known. Nataliella is assigned to the family Rhinoptericolidae Carvajal & Campbell, 1975 based on its possession of four bothria, prebulbar organs and no chainette or intercalary hooks. The family diagnosis is amended to accommodate the new genus. Rhinoptericola megacantha Carvajal & Campbell, 1975 is considered the most closely related species, a position that has been confirmed by molecular analyses of the SSU and LSU rDNA. Nataliella n. g. is intermediate in morphology between the homeoacanth family Tentaculariidae Poche, 1926 (superfamily Tentacularioidea) and the Rhinoptericolidae and other eutetrarhynchid genera (superfamily Eutetrarhynchoidea), sharing characters of both superfamilies.

Elastic instabilities in planar elongational flow of monodisperse polymer solutions

PubMed Central

Haward, Simon J.; McKinley, Gareth H.; Shen, Amy Q.

2016-01-01

We investigate purely elastic flow instabilities in the almost ideal planar stagnation point elongational flow field generated by a microfluidic optimized-shape cross-slot extensional rheometer (OSCER). We use time-resolved flow velocimetry and full-field birefringence microscopy to study the behavior of a series of well-characterized viscoelastic polymer solutions under conditions of low fluid inertia and over a wide range of imposed deformation rates. At low deformation rates the flow is steady and symmetric and appears Newtonian-like, while at high deformation rates we observe the onset of a flow asymmetry resembling the purely elastic instabilities reported in standard-shaped cross-slot devices. However, for intermediate rates, we observe a new type of elastic instability characterized by a lateral displacement and time-dependent motion of the stagnation point. At the onset of this new instability, we evaluate a well-known dimensionless criterion M that predicts the onset of elastic instabilities based on geometric and rheological scaling parameters. The criterion yields maximum values of M which compare well with critical values of M for the onset of elastic instabilities in viscometric torsional flows. We conclude that the same mechanism of tension acting along curved streamlines governs the onset of elastic instabilities in both extensional (irrotational) and torsional (rotational) viscoelastic flows. PMID:27616181

Petrological insights into intermediate-depths of a subduction plate interface

NASA Astrophysics Data System (ADS)

Angiboust, Samuel; Agard, Philippe

2013-04-01

Understanding processes acting along the subduction interface is crucial to assess lithospheric scale coupling between tectonic plates, exhumation of deep-seated rocks and mechanisms causing intermediate-depth seismicity. Yet, despite a wealth of geophysical studies aimed at better characterizing the subduction interface, we still lack critical petrological data constraining such processes as intermediate-seismicity within oceanic subduction zones. This contribution reviews recent findings from two major localities showing deeply subducted ophiolitic remnants (Zermatt-Saas, Monviso), which crop out in the classic, well-preserved fossil subduction setting of the Western Alps. We herein show that both ophiolite remnants represent large, relatively continuous fragments of oceanic lithosphere (i.e., several km-thick tectonic slices across tens of km) exhumed from ~80 km depths and thereby provide important constraints on interplate coupling mechanisms. In both fragments (but even more so in the Zermatt-Saas one) pervasive hydrothermal processes and seafloor alteration, promoting fluid incorporation in both mafic and associated ultramafic rocks, was essential, together with the presence of km-thick serpentinite soles, to decrease the density of the tectonic slices and prevent them from an irreversible sinking into the mantle. The Monviso case sudy provides further insights into the subduction plate interface at ~80 km depths. The Lago Superiore Unit, in particular, is made of a 50-500 m thick eclogitized mafic crust (associated with minor calcschist lenses) overlying a 100-400 m thick metagabbroic body and a km-thick serpentinite sole, and is cut by two 10 to 100m thick eclogite-facies shear zones, respectively located at the boundary between basalts and gabbros, and between gabbros and serpentinites (the Lower Shear Zone: LSZ). The LSZ gives precious information on both seismicity and fluid flow: (1) Eclogite breccias, reported here for the first time, mark the locus of an ancient fault zone associated with intraslab, intermediate-depth earthquakes at ~80 km depth. They correspond to m-sized blocks made of 1-10 cm large fragments of eclogite mylonite later embedded in serpentinite in the eclogite facies LSZ. We suggest that seismic brecciation (possibly at magnitudes Mw ~4) occurred in the middle part of the oceanic crust, accompanied by the input of externally-derived fluids. (2) Prominent fluid-rock interactions, as attested by ubiquitous metasomatic rinds, affected the fragments of mylonitic basaltic eclogites and calcschists dragged and dismembered within serpentinite during eclogite-facies deformation. Detailed petrological and geochemical investigations point to a massive, pulse-like, fluid-mediated element transfer essentially originating from serpentinite. Antigorite breakdown, occurring ca. 15 km deeper than the maximum depth reached by these eclogites, is regarded as the likely source of this highly focused fluid/rock interaction and element transfer. Such a pulse-like, subduction-parallel fluid migration pathway within the downgoing oceanic lithosphere may have been promoted by transient slip behaviour along the LSZ under eclogite-facies conditions. These petrological data are finally tied to bi-phase numerical models in which fluid migration is driven by fluid concentrations in the rocks, non-lithostatic pressure gradients and deformation, and that allow for mantle wedge hydration and mechanical weakening of the plate interface. We suggest that the detachment of such oceanic tectonic slices is largely promoted by fluid circulation along the subduction interface, as well as by subducting a strong and originally discontinuous mafic crust.

Geological features of Subduction Transfer Edge Propagator (STEP) faults, examples from the Betics and Rif

NASA Astrophysics Data System (ADS)

Booth-Rea, Guillermo; Pérez-Peña, Vicente; Azañón, José Miguel; de Lis Mancilla, Flor; Morales, Jose; Stich, Daniel; Giaconia, Flavio

2014-05-01

Most of the geological features of the Betics and Rif have resulted from slab tearing, edge delamination and punctual slab breakoff events between offset STEP faults. New P-reciever function data of the deep structure under the Betics and Rif have helped to map the deep boundaries of slab tearing and rupture in the area. Linking surface geological features with the deep structure shows that STEP faulting under the Betics occurred along ENE-WSW segments offset towards the south, probably do to the westward narrowing of the Tethys slab. The surface expression of STEP faulting at the Betics consists of ENE-WSW dextral strike-slip fault segments like the Crevillente, Alpujarras or Torcal faults that are interrupted by basins and elongated extensional domes were exhumed HP middle crust occurs. Exhumation of deep crust erases the effects of strike-slip faulting in the overlying brittle crust. Slab tearing affected the eastern Betics during the Tortonian to Messinian, producing the Fortuna and Lorca basins, and later propagated westward generating the end-Messinian to Pleistocene Guadix-Baza basins and the Granada Pliocene-Pleistocene depocentre. At present slab tearing is occurring beneath the Málaga depression, where the Torcal dextral strike-slip fault ends in a region of active distributed shortening and where intermediate depth seismicity occurs. STEP fault migration has occurred at average rates between 2 and 4 cm/yr since the late Miocene, producing a wave of alternating uplift-subsidence pulses. These initiate with uplift related to slab flexure, subsidence related to slab-pull, followed by uplift after rupture and ending with thermal subsidence. This "yo-yo" type tectonic evolution leads to the generation of endorheic basins that later evolve to exhorheic when they are uplifted and captured above the region where asthenospheric upwelling occurs.

SU-C-304-06: Determination of Intermediate Correction Factors for Three Dosimeters in Small Composite Photon Fields Used in Robotic Radiosurgery

DOE Office of Scientific and Technical Information (OSTI.GOV)

Christiansen, E; Belec, J; Vandervoort, E

2015-06-15

Purpose: To calculate using Monte-Carlo the intermediate and total correction factors (CFs) for two microchambers and a plastic scintillator for composite fields delivered by the CyberKnife system. Methods: A linac model was created in BEAMnrc by matching percentage depth dose (PDD) curves and output factors (OFs) measured using an A16 microchamber with Monte Carlo calculations performed in egs-chamber to explicitly model detector response. Intermediate CFs were determined for the A16 and A26 microchambers and the W1 plastic scintillator in fourteen different composite fields inside a solid water phantom. Seven of these fields used a 5 mm diameter collimator; the remainingmore » fields employed a 7.5 mm collimator but were otherwise identical to the first seven. Intermediate CFs are reported relative to the respective CF for a 60 mm collimator (800 mm source to detector distance and 100 mm depth in water). Results: For microchambers in composite fields, the intermediate CFs that account for detector density and volume were the largest contributors to total CFs. The total CFs for the A26 were larger than those for the A16, especially for the 5 mm cone (1.227±0.003 to 1.144±0.004 versus 1.142±0.003 to 1.099±0.004), due to the A26’s larger active volume (0.015 cc) relative to the A16 (0.007 cc), despite the A26 using similar wall and electrode material. The W1 total and intermediate CFs are closer to unity, due to its smaller active volume and near water-equivalent composition, however, 3–4% detector volume corrections are required for 5 mm collimator fields. In fields using the 7.5 mm collimator, the correction is nearly eliminated for the W1 except for a non-isocentric field. Conclusion: Large and variable CFs are required for microchambers in small composite fields primarily due to density and volume effects. Corrections are reduced but not eliminated for a plastic scintillator in the same fields.« less

Late Quaternary changes in intermediate water oxygenation and oxygen minimum zone, northern Japan: A benthic foraminiferal perspective

NASA Astrophysics Data System (ADS)

Shibahara, Akihiko; Ohkushi, Ken'ichi; Kennett, James P.; Ikehara, Ken

2007-09-01

A strong oxygen minimum zone (OMZ) currently exists at upper intermediate water depths on the northern Japanese margin, NW Pacific. The OMZ results largely from a combination of high surface water productivity and poor ventilation of upper intermediate waters. We investigated late Quaternary history (last 34 kyr) of ocean floor oxygenation and the OMZ using quantitative changes in benthic foraminiferal assemblages in three sediment cores taken from the continental slope off Shimokita Peninsula and Tokachi, northern Japan, at water depths between 975 and 1363 m. These cores are well located within the present-day OMZ, a region of high surface water productivity, and in close proximity to the source region of North Pacific Intermediate Water. Late Quaternary benthic foraminiferal assemblages experienced major changes in response to changes in dissolved oxygen concentration in ocean floor sediments. Foraminiferal assemblages are interpreted to represent three main groups representing oxic, suboxic, and dysoxic conditions. Assemblage changes in all three cores and hence in bottom water oxygenation coincided with late Quaternary climatic episodes, similar to that known for the southern California margin. These episodes, in turn, are correlated with orbital and millennial climate episodes in the Greenland ice core including the last glacial episode, Bølling-Ållerød (B/A), Younger Dryas, Preboreal (earliest Holocene), early Holocene, and late Holocene. The lowest oxygen conditions, marked by dysoxic taxa and laminated sediments in one core, occurred during the B/A and the Preboreal intervals. Suboxic taxa dominated mainly during the last glacial, the Younger Dryas, and most of the Holocene. Dysoxic conditions during the B/A and Preboreal intervals in this region were possibly caused by high surface water productivity at times of reduced intermediate ventilation in the northwestern Pacific. Remarkable similarities are evident in the late Quaternary sequence of benthic foraminiferal assemblage change between the two very distant continental margins of northern Japan and southern California. The oscillations in OMZ strength, reflected by these faunal changes, were widespread and apparently synchronous over wide areas of the North Pacific, reflecting broad changes in intermediate water ventilation and surface ocean productivity closely linked with late Quaternary climate change on millennial and orbital timescales.

Math Process Standards Series, Grades 3-5

ERIC Educational Resources Information Center

O'Connell, Susan, Ed.

2008-01-01

NCTM's Process Standards support teaching that helps upper elementary level children develop independent, effective mathematical thinking. The books in the Heinemann Math Process Standards Series give every intermediate-grades teacher the opportunity to explore each standard in depth. With language and examples that don't require prior math…

Reactivation of Deep Subsurface Microbial Community in Response to Methane or Methanol Amendment

PubMed Central

Rajala, Pauliina; Bomberg, Malin

2017-01-01

Microbial communities in deep subsurface environments comprise a large portion of Earth’s biomass, but the microbial activity in these habitats is largely unknown. Here, we studied how microorganisms from two isolated groundwater fractures at 180 and 500 m depths of the Outokumpu Deep Drillhole (Finland) responded to methane or methanol amendment, in the presence or absence of sulfate as an additional electron acceptor. Methane is a plausible intermediate in the deep subsurface carbon cycle, and electron acceptors such as sulfate are critical components for oxidation processes. In fact, the majority of the available carbon in the Outokumpu deep biosphere is present as methane. Methanol is an intermediate of methane oxidation, but may also be produced through degradation of organic matter. The fracture fluid samples were incubated in vitro with methane or methanol in the presence or absence of sulfate as electron acceptor. The metabolic response of microbial communities was measured by staining the microbial cells with fluorescent redox sensitive dye combined with flow cytometry, and DNA or cDNA-derived amplicon sequencing. The microbial community of the fracture zone at the 180 m depth was originally considerably more respiratory active and 10-fold more numerous (105 cells ml-1 at 180 m depth and 104 cells ml-1 at 500 m depth) than the community of the fracture zone at the 500 m. However, the dormant microbial community at the 500 m depth rapidly reactivated their transcription and respiration systems in the presence of methane or methanol, whereas in the shallower fracture zone only a small sub-population was able to utilize the newly available carbon source. In addition, the composition of substrate activated microbial communities differed at both depths from original microbial communities. The results demonstrate that OTUs representing minor groups of the total microbial communities play an important role when microbial communities face changes in environmental conditions. PMID:28367144

Intermediate and deep water mass distribution in the Pacific during the Last Glacial Maximum inferred from oxygen and carbon stable isotopes

NASA Astrophysics Data System (ADS)

Herguera, J. C.; Herbert, T.; Kashgarian, M.; Charles, C.

2010-05-01

Intermediate ocean circulation changes during the last Glacial Maximum (LGM) in the North Pacific have been linked with Northern Hemisphere climate through air-sea interactions, although the extent and the source of the variability of the processes forcing these changes are still not well resolved. The ventilated volumes and ages in the upper wind driven layer are related to the wind stress curl and surface buoyancy fluxes at mid to high latitudes in the North Pacific. In contrast, the deeper thermohaline layers are more effectively ventilated by direct atmosphere-sea exchange during convective formation of Subantarctic Mode Waters (SAMW) and Antarctic Intermediate Waters (AAIW) in the Southern Ocean, the precursors of Pacific Intermediate Waters (PIW) in the North Pacific. Results reported here show a fundamental change in the carbon isotopic gradient between intermediate and deep waters during the LGM in the eastern North Pacific indicating a deepening of nutrient and carbon rich waters. These observations suggest changes in the source and nature of intermediate waters of Southern Ocean origin that feed PIW and enhanced ventilation processes in the North Pacific, further affecting paleoproductivity and export patters in this basin. Furthermore, oxygen isotopic results indicate these changes may have been accomplished in part by changes in circulation affecting the intermediate depths during the LGM.

Targeted energy transfer in laminar vortex-induced vibration of a sprung cylinder with a nonlinear dissipative rotator

NASA Astrophysics Data System (ADS)

Blanchard, Antoine; Bergman, Lawrence A.; Vakakis, Alexander F.

2017-07-01

We computationally investigate the dynamics of a linearly-sprung circular cylinder immersed in an incompressible flow and undergoing transverse vortex-induced vibration (VIV), to which is attached a rotational nonlinear energy sink (NES) consisting of a mass that freely rotates at constant radius about the cylinder axis, and whose motion is restrained by a rotational linear viscous damper. The inertial coupling between the rotational motion of the attached mass and the rectilinear motion of the cylinder is ;essentially nonlinear;, which, in conjunction with dissipation, allows for one-way, nearly irreversible targeted energy transfer (TET) from the oscillating cylinder to the nonlinear dissipative attachment. At the intermediate Reynolds number Re = 100, the NES-equipped sprung cylinder undergoes repetitive cycles of slowly decaying oscillations punctuated by intervals of chaotic instabilities. During the slowly decaying portion of each cycle, the dynamics of the cylinder is regular and, for large enough values of the ratio ε of the NES mass to the total mass (i.e., NES mass plus cylinder mass), can lead to significant vortex street elongation with partial stabilization of the wake. As ε approaches zero, no such vortex elongation is observed and the wake patterns appear similar to that for a sprung cylinder with no NES. We apply proper orthogonal decomposition (POD) to the velocity flow field during a slowly decaying portion of the solution and show that, in situations where vortex elongation occurs, the NES, though not in direct contact with the surrounding fluid, has a drastic effect on the underlying flow structures, imparting significant and continuous passive redistribution of energy among POD modes. We construct a POD-based reduced-order model for the lift coefficient to characterize energy transactions between the fluid and the cylinder throughout the slowly decaying cycle. We introduce a quantitative signed measure of the work done by the fluid on the cylinder over one quasi-period of the slowly decaying response and find that vortex elongation is associated with a sign change of that measure, indicating that a reversal of the direction of energy transfer, with the cylinder ;leaking energy back; to the flow, is responsible for partial stabilization and elongation of the wake. We interpret these findings in terms of the spatial structure and energy distribution of the POD modes, and relate them to the mechanism of transient resonance capture into a slow invariant manifold of the fluid-structure interaction dynamics.

Water pressure and ground vibrations induced by water guns at a backwater pond on the Illinois River near Morris, Illinois

USGS Publications Warehouse

Koebel, Carolyn M.; Egly, Rachel M.

2016-09-27

Three different geophysical sensor types were used to characterize the underwater pressure waves and ground velocities generated by the underwater firing of seismic water guns. These studies evaluated the use of water guns as a tool to alter the movement of Asian carp. Asian carp are aquatic invasive species that threaten to move into the Great Lakes Basin from the Mississippi River Basin. Previous studies have identified a threshold of approximately 5 pounds per square inch (lb/in2) for behavioral modification and for structural limitation of a water gun barrier.Two studies were completed during August 2014 and May 2015 in a backwater pond connected to the Illinois River at a sand and gravel quarry near Morris, Illinois. The August 2014 study evaluated the performance of two 80-cubic-inch (in3) water guns. Data from the 80-in3 water guns showed that the pressure field had the highest pressures and greatest extent of the 5-lb/in2 target value at a depth of 5 feet (ft). The maximum recorded pressure was 13.7 lb/in2, approximately 25 ft from the guns. The produced pressure field took the shape of a north-south-oriented elongated sphere with the 5-lb/in2 target value extending across the entire study area at a depth of 5 ft. Ground velocities were consistent over time, at 0.0067 inches per second (in/s) in the transverse direction, 0.031 in/s in the longitudinal direction, and 0.013 in/s in the vertical direction.The May 2015 study evaluated the performance of one and two 100-in3 water guns. Data from the 100-in3 water guns, fired both individually and simultaneously, showed that the pressure field had the highest pressures and greatest extent of the 5-lb/in2 target value at a depth of 5 ft. The maximum pressure was 57.4 lb/in2, recorded at the underwater blast sensor closest to the water guns (at a horizontal distance of approximately 3 ft), as two guns fired simultaneously. Pressures and extent of the 5-lb/in2 target value decrease above and below this 5-ft depth, producing a relatively north-south-oriented pressure field shaped like an elongated sphere.

Basement structure of the United Arab Emirates derived from an analysis of regional gravity and aeromagnetic database

NASA Astrophysics Data System (ADS)

Ali, M. Y.; Fairhead, J. D.; Green, C. M.; Noufal, A.

2017-08-01

Gravity and aeromagnetic data covering the whole territory of the United Arab Emirates (UAE) have been used to evaluate both shallow and deep geological structures, in particular the depth to basement since it is not imaged by seismic data anywhere within the UAE. Thus, the aim has been to map the basement so that its structure can help to assess its control on the distribution of hydrocarbons within the UAE. Power spectrum analysis reveals gravity and magnetic signatures to have some similarities, in having two main density/susceptibility interfaces widely separated in depth such that regional-residual anomaly separation could effectively be undertaken. The upper density/susceptibility interface occurs at a depth of about 1.0 km while the deeper interface varies in depth throughout the UAE. For gravity, this deeper interface is assumed to be due to the combined effect of lateral changes in density structures within the sediments and in depth of basement while for magnetics it is assumed the sediments have negligible susceptibility and the anomalies unrelated to the volcanic/magmatic bodies result from only changes in depth to basement. The power spectrum analysis over the suspect volcanic/magmatic bodies indicates they occur at 5 km depth. The finite tilt-depth and finite local wavenumber methods were used to estimate depth to source and only depths that agree to within 10% of each other were used to generate the depth to basement map. This depth to basement map, to the west of the UAE-Oman Mountains, varies in depth from 5 km to in excess of 15 km depth and is able to structurally account for the location of the shear structures, seen in the residual magnetic data, and the location of the volcanic/magmatic centres relative to a set of elongate N-S to NE-SW trending basement highs. The majority of oilfields in the UAE are located within these basement highs. Therefore, the hydrocarbon distribution in the UAE basin appears to be controlled by the location of the basement ridges.

Dark-soliton dynamics in Bose-Einstein condensates at finite temperature

DOE Office of Scientific and Technical Information (OSTI.GOV)

Jackson, B.; Proukakis, N. P.; Barenghi, C. F.

2007-05-15

The dynamics of a dark soliton in an elongated Bose-Einstein condensate is studied at finite temperatures. In addition to accurately reproducing all stages of the decay of the soliton observed in the experiment of Burger et al. [Phys. Rev. Lett. 83, 5198 (1999)], our numerical simulations reveal the existence of an experimentally accessible parameter regime for which phase-imprinted dark solitons can execute at least one full axial oscillation prior to their decay. The dependence of the decay time scale on temperature and initial soliton depth is analyzed and the role of interatomic collisions quantified.

Spatial distributions of sulphur species and sulphate-reducing bacteria provide insights into sulphur redox cycling and biodegradation hot-spots in a hydrocarbon-contaminated aquifer

NASA Astrophysics Data System (ADS)

Einsiedl, Florian; Pilloni, Giovanni; Ruth-Anneser, Bettina; Lueders, Tillman; Griebler, Christian

2015-05-01

Dissimilatory sulphate reduction (DSR) has been proven to be one of the most relevant redox reactions in the biodegradation of contaminants in groundwater. However, the possible role of sulphur species of intermediate oxidation state, as well as the role of potential re-oxidative sulphur cycling in biodegradation particularly at the groundwater table are still poorly understood. Here we used a combination of stable isotope measurements of SO42-, H2S, and S0 as well as geochemical profiling of sulphur intermediates with special emphasis on SO32-, S2O32-, and S0 to unravel possible sulphur cycling in the biodegradation of aromatics in a hydrocarbon-contaminated porous aquifer. By linking these results to the quantification of total bacterial rRNA genes and respiratory genes of sulphate reducers, as well as pyrotag sequencing of bacterial communities over depth, light is shed on possible key-organisms involved. Our results substantiate the role of DSR in biodegradation of hydrocarbons (mainly toluene) in the highly active plume fringes above and beneath the plume core. In both zones the concentration of sulphur intermediates (S0, SO32- and S2O32-) was almost twice that of other sampling-depths, indicating intense sulphur redox cycling. The dual isotopic fingerprint of oxygen and sulphur in dissolved sulphate suggested a re-oxidation of reduced sulphur compounds to sulphate especially at the upper fringe zone. An isotopic shift in δ34S of S0 of nearly +4‰ compared to the δ34S values of H2S from the same depth linked to a high abundance (∼10%) of sequence reads related to Sulphuricurvum spp. (Epsilonproteobacteria) in the same depth were indicative of intensive oxidation of S0 to sulphate in this zone. At the lower plume fringe S0 constituted the main inorganic sulphur species, possibly formed by abiotic re-oxidation of H2S with Fe(III)oxides subsequent to sulphate reduction. These results provide first insights into intense sulphur redox cycling in a hydrocarbon contaminant plume, which widens the perspective of redox processes and microbial interactions ongoing in contaminated aquifers.

Distribution of dissolved zinc in the western and central subarctic North Pacific

NASA Astrophysics Data System (ADS)

Kim, T.; Obata, H.; Gamo, T.

2016-02-01

Zinc (Zn) is an essential micronutrient for bacteria and phytoplankton in the ocean as it plays an important role in numerous enzyme systems involved in various metabolic processes. However, large-scale distributions of total dissolved Zn in the subarctic North Pacific have not been investigated yet. In this study, we investigated the distributions of total dissolved Zn to understand biogeochemical cycling of Zn in the western and central subarctic North Pacific as a Japanese GEOTRACES project. Seawater samples were collected during the R/V Hakuho-maru KH-12-4 GEOTRACES GP 02 cruise (from August to October 2012), by using acid-cleaned Teflon-coated X-type Niskin samplers. Total dissolved Zn in seawater was determined using cathodic stripping voltammetry (CSV) after UV-digestion. In this study, total dissolved Zn concentrations in the western and central subarctic North Pacific commonly showed Zn increase from surface to approximately 400-500 m, just above the oxygen minimum layer. However, in the western subarctic North Pacific, relatively higher Zn concentrations have also been observed at intermediate depths (800-1200 m), in comparison with those observed in deep waters. The relationship between Zn and Si in the western subarctic North Pacific showed that Zn is slightly enriched at intermediate depths. These results may indicate that there are additional sources of Zn to intermediate water of the western subarctic North Pacific.

Teaching Foreign Cultural Literacy with Margarethe von Trotta's "Das Versprechen"

ERIC Educational Resources Information Center

Kuttenberg, Eva

2003-01-01

This article describes model units for an in-depth cultural analysis of "Das Versprechen" in undergraduate college courses including intermediate German, German culture and civilization, advanced conversation and composition, and film. Practical suggestions for pre-viewing, viewing, and post-viewing activities as well as assessment in…

Environmental and Water Quality Operational Studies. Riverine Influences on the Water Quality Characteristics of West Point Lake.

DTIC Science & Technology

1984-01-01

photosynthetic productivity and -. the confinement of river water to intermediate depths. Increases in manga - nese concentration and dye distribution...reduction of suspended in- soluble manganese would not account for the increase in dissolved manga - .. nese. The only available source of additional

Genome-wide analysis reveals phytohormone action during cassava storage root initiation.

PubMed

Sojikul, Punchapat; Saithong, Treenut; Kalapanulak, Saowalak; Pisuttinusart, Nuttapat; Limsirichaikul, Siripan; Tanaka, Maho; Utsumi, Yoshinori; Sakurai, Tetsuya; Seki, Motoaki; Narangajavana, Jarunya

2015-08-01

Development of storage roots is a process associated with a phase change from cell division and elongation to radial growth and accumulation of massive amounts of reserve substances such as starch. Knowledge of the regulation of cassava storage root formation has accumulated over time; however, gene regulation during the initiation and early stage of storage root development is still poorly understood. In this study, transcription profiling of fibrous, intermediate and storage roots at eight weeks old were investigated using a 60-mer-oligo microarray. Transcription and gene expression were found to be the key regulating processes during the transition stage from fibrous to intermediate roots, while homeostasis and signal transduction influenced regulation from intermediate roots to storage roots. Clustering analysis of significant genes and transcription factors (TF) indicated that a number of phytohormone-related TF were differentially expressed; therefore, phytohormone-related genes were assembled into a network of correlative nodes. We propose a model showing the relationship between KNOX1 and phytohormones during storage root initiation. Exogeneous treatment of phytohormones N (6) -benzylaminopurine and 1-Naphthaleneacetic acid were used to induce the storage root initiation stage and to investigate expression patterns of the genes involved in storage root initiation. The results support the hypothesis that phytohormones are acting in concert to regulate the onset of cassava storage root development. Moreover, MeAGL20 is a factor that might play an important role at the onset of storage root initiation when the root tip becomes swollen.

Genetic variability and haplotypes of Echinococcus isolates from Tunisia.

PubMed

Boufana, Belgees; Lahmar, Samia; Rebaï, Waël; Ben Safta, Zoubeir; Jebabli, Leïla; Ammar, Adel; Kachti, Mahmoud; Aouadi, Soufia; Craig, Philip S

2014-11-01

The species/genotypes of Echinococcus infecting a range of intermediate, canid and human hosts were examined as well as the intraspecific variation and population structure of Echinococcus granulosus sensu lato (s.l.) within these hosts. A total of 174 Echinococcus isolates from humans and ungulate intermediate hosts and adult tapeworms from dogs and jackals were used. Genomic DNA was used to amplify a fragment within a mitochondrial gene and a nuclear gene, coding for cytochrome c oxidase subunit 1 (cox1; 828 bp) and elongation factor 1-alpha (ef1a; 656 bp), respectively. E. granulosus sensu stricto was identified from all host species examined, E. canadensis (G6) in a camel and, for the first time, fertile cysts of E. granulosus (s.s.) and E. equinus in equids (donkeys) and E. granulosus (s.s.) from wild boars and goats. Considerable genetic variation was seen only for the cox1 sequences of E. granulosus (s.s.). The pairwise fixation index (Fst) for cox1 E. granulosus (s.s.) sequences from donkeys was high and was statistically significant compared with that of E. granulosus populations from other intermediate hosts. A single haplotype (EqTu01) was identified for the cox1 nucleotide sequences of E. equinus. The role of donkeys in the epidemiology of echinococcosis in Tunisia requires further investigation. © The Author 2014. Published by Oxford University Press on behalf of Royal Society of Tropical Medicine and Hygiene. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

Clinical outcome and higher order aberrations after bilateral implantation of an extended depth of focus intraocular lens.

PubMed

Pilger, Daniel; Homburg, David; Brockmann, Tobias; Torun, Necip; Bertelmann, Eckart; von Sonnleithner, Christoph

2018-04-01

The purpose of this study was to assess the clinical outcome after a bilateral implantation of an extended depth of focus intraocular lens in comparison to a monofocal intraocular lens. Department of Ophthalmology, Charité-Medical University Berlin, Germany. A total of 60 eyes of 30 patients were enrolled in this prospective, single-center study. The cataract patients underwent phacoemulsification with bilateral implantation of a TECNIS ® Symfony (Abbott Medical Optics, Santa Ana, CA, USA, 15 patients) or a TECNIS Monofocal ZCB00 (Abbott Medical Optics, Santa Ana, CA, USA, 15 patients). Postoperative evaluations were performed after 1 and 3 months, including visual acuities at far, intermediate, and near distance. Mesopic, scotopic vision, and contrast sensitivity were investigated. Aberrometry was performed using an iTrace aberrometer with a pupil scan size of 5.0 mm. After 3 months, the TECNIS Symfony group reached an uncorrected visual acuity at far distance of -0.02 logMAR compared to -0.06 logMAR in the TECNIS Monofocal group ( p = 0.03). Regarding the uncorrected vision at intermediate and near distance the following values were obtained: intermediate visual acuity -0.13 versus 0.0 logMAR (TECNIS Symfony vs TECNIS Monofocal, p = 0.001) and near visual acuity 0.11 versus 0.26 logMAR (TECNIS Symfony vs TECNIS Monofocal, p = 0.001). Low-contrast visual acuities were 0.27 versus 0.20 logMar (TECNIS Symfony vs TECNIS Monofocal, p = 0.023). The TECNIS Symfony intraocular lens can be considered an appropriate alternative to multifocal intraocular lenses because of good visual results at far, intermediate, and near distance as well as in low-contrast vision.

Polybenzimidazole/Mxene composite membranes for intermediate temperature polymer electrolyte membrane fuel cells.

PubMed

Fei, Mingming; Lin, Ruizhi; Deng, Yuming; Xian, Hongxi; Bian, Renji; Zhang, Xiaole; Cheng, Jigui; Xu, Chenxi; Cai, Dongyu

2018-01-19

This report demonstrated the first study on the use of a new 2D nanomaterial (Mxene) for enhancing membrane performance of intermediate temperature (>100 °C) polymer electrolyte membrane fuel cells (ITPEMFCs). In this study, a typical Ti 3 C 2 T x -MXene was synthesized and incorporated into polybenzimidazole (PBI)-based membranes by using a solution blending method. The composite membrane with 3 wt% Ti 3 C 2 T x -MXene showed the proton conductivity more than 2 times higher than that of pristine PBI membrane at the temperature range of 100 °C-170 °C, and led to substantial increase in maximum power density of fuel cells by ∼30% tested at 150 °C. The addition of Ti 3 C 2 T x -MXene also improved the mechanical properties and thermal stability of PBI membranes. At 3 wt% Ti 3 C 2 T x -MXene, the elongation at break of phosphoric acid doped PBI remained unaffected at 150 °C, and the tensile strength and Young's modulus was increased by ∼150% and ∼160%, respectively. This study pointed out promising application of MXene in ITPEMFCs.

Effect of thermomechanical treatment on the microstructure, phase composition, and mechanical properties of Al-Cu-Mn-Mg-Zr alloy

NASA Astrophysics Data System (ADS)

Zuiko, I. S.; Gazizov, M. R.; Kaibyshev, R. O.

2016-09-01

The effect of the thermomechanical treatment on the microstructure, phase composition, and mechanical properties of heat-treatable AA2519 aluminum alloy (according to the classification of the Aluminum Association) has been considered. After solid-solution treatment, quenching, and artificial aging (T6 treatment) at 180°C for the peak strength, the yield stress, ultimate tensile strength, and elongation to failure are ~300 MPa, 435 MPa, and 21.7%, respectively. It has been shown that treatments that include intermediate plastic deformations with degrees of 7 and 15% (T87 and T815 treatments, respectively) have a significant effect on the phase composition and morphology of strengthening particles precipitated during peak aging T8X type, where X is pre-strain percent, treatments initiate the precipitation of significant amounts of particles of the θ'- and Ω-phases. After T6 treatment, predominantly homogeneously distributed particles of θ″-phase have been observed. Changes in the microstructure and phase composition of the AA2519 alloy, which are caused by intermediate deformation, lead to a significant increase in the yield stress and ultimate tensile strength (by ~40 and ~8%, respectively), whereas the plasticity decreases by 40-50%.

Polybenzimidazole/Mxene composite membranes for intermediate temperature polymer electrolyte membrane fuel cells

NASA Astrophysics Data System (ADS)

Fei, Mingming; Lin, Ruizhi; Deng, Yuming; Xian, Hongxi; Bian, Renji; Zhang, Xiaole; Cheng, Jigui; Xu, Chenxi; Cai, Dongyu

2018-01-01

This report demonstrated the first study on the use of a new 2D nanomaterial (Mxene) for enhancing membrane performance of intermediate temperature (>100 °C) polymer electrolyte membrane fuel cells (ITPEMFCs). In this study, a typical Ti3C2T x -MXene was synthesized and incorporated into polybenzimidazole (PBI)-based membranes by using a solution blending method. The composite membrane with 3 wt% Ti3C2T x -MXene showed the proton conductivity more than 2 times higher than that of pristine PBI membrane at the temperature range of 100 °C-170 °C, and led to substantial increase in maximum power density of fuel cells by ˜30% tested at 150 °C. The addition of Ti3C2T x -MXene also improved the mechanical properties and thermal stability of PBI membranes. At 3 wt% Ti3C2T x -MXene, the elongation at break of phosphoric acid doped PBI remained unaffected at 150 °C, and the tensile strength and Young’s modulus was increased by ˜150% and ˜160%, respectively. This study pointed out promising application of MXene in ITPEMFCs.

Focal Mechanisms From Moment Tensor Solutions and First Motion Polarities of Shallow to Deep Local Earthquakes in Eastern Nepal and Southern Tibet

NASA Astrophysics Data System (ADS)

de La Torre, T. L.; Sheehan, A. F.; Monsalve, G.; Wu, F.

2004-12-01

We determined focal mechanisms using waveforms and first motion polarities from local earthquakes recorded during the Himalayan Nepal Tibet Seismic Experiment (HIMNT). The HIMNT experiment included the deployment of 28 broad band seismometers in eastern Nepal and southern Tibet from September 2001 to April 2003. Using a regional moment tensor method (Ammon and Randall, 2001) and first motion polarities for displaying double-couple focal mechanisms (Snokes, 2003), we analyzed the fault plane solutions at three distinct zones of seismicity. Characteristic focal mechanisms in seismically concentrated areas may indicate the presence of fault ramps or a decollement in the Himalayan collision zone. Previous studies of focal mechanisms on the Tibetan Plateau predominantly indicate east-west extension and shallow thrusting at the Himalayan collision zone for shallow to intermediate earthquakes (Ni and Barazangi, 1984; Molnar and Lyon-Caen, 1989; Randall et al., 1995) and east-west extension for intermediate to deep earthquakes (Zhu and Helmberger, 1996; Chen and Yang, 2004). The first zone in southeast Nepal between the Main Boundary and Main Frontal faults consist of earthquakes < Mw 4.0 at depths 40 - 60 km near the epicenter of the 1988 Udaypur earthquake, Mb 6.1, depth 57 km. The second zone north of the Main Central Thrust outcrop in eastern Nepal consists of 14 earthquakes 3.0 - 5.0 Mw at depths < 30 km that indicate north-south strike normal faulting and east-west strike thrust faulting. The third zone is an arc parallel to the Himalayas in southern Tibet and a cluster in northeast Nepal. This zone consists of 45 earthquakes < 4.0 Mw at depths > 50 km. Four earthquakes indicate northwest-southeast compression resulting in northeast strike strike-slip faulting while one earthquake in the northeast cluster indicates east-west compression at a source depth below the crust-mantle boundary. Focal mechanisms from full waveform moment tensor inversions are cross checked with first motion solutions for selected events. Source depths as determined from normalized error of the sum of the squared differences between the data and synthetic seismogram coincide with the source depths determined from the travel time residual inversion.

Long-range and depth-selective imaging of macroscopic targets using low-coherence and wide-field interferometry (Conference Presentation)

NASA Astrophysics Data System (ADS)

Woo, Sungsoo; Kang, Sungsam; Yoon, Changhyeong; Choi, Wonshik

2016-03-01

With the advancement of 3D display technology, 3D imaging of macroscopic objects has drawn much attention as they provide the contents to display. The most widely used imaging methods include a depth camera, which measures time of flight for the depth discrimination, and various structured illumination techniques. However, these existing methods have poor depth resolution, which makes imaging complicated structures a difficult task. In order to resolve this issue, we propose an imaging system based upon low-coherence interferometry and off-axis digital holographic imaging. By using light source with coherence length of 200 micro, we achieved the depth resolution of 100 micro. In order to map the macroscopic objects with this high axial resolution, we installed a pair of prisms in the reference beam path for the long-range scanning of the optical path length. Specifically, one prism was fixed in position, and the other prism was mounted on a translation stage and translated in parallel to the first prism. Due to the multiple internal reflections between the two prisms, the overall path length was elongated by a factor of 50. In this way, we could cover a depth range more than 1 meter. In addition, we employed multiple speckle illuminations and incoherent averaging of the acquired holographic images for reducing the specular reflections from the target surface. Using this newly developed system, we performed imaging targets with multiple different layers and demonstrated imaging targets hidden behind the scattering layers. The method was also applied to imaging targets located around the corner.

Impact assessment of intermediate soil cover on landfill stabilization by characterizing landfilled municipal solid waste.

PubMed

Qi, Guangxia; Yue, Dongbei; Liu, Jianguo; Li, Rui; Shi, Xiaochong; He, Liang; Guo, Jingting; Miao, Haomei; Nie, Yongfeng

2013-10-15

Waste samples at different depths of a covered municipal solid waste (MSW) landfill in Beijing, China, were excavated and characterized to investigate the impact of intermediate soil cover on waste stabilization. A comparatively high amount of unstable organic matter with 83.3 g kg(-1) dry weight (dw) total organic carbon was detected in the 6-year-old MSW, where toxic inorganic elements containing As, Cd, Cr, Cu, Mn, Ni, Pb, and Zn of 10.1, 0.98, 85.49, 259.7, 530.4, 30.5, 84.0, and 981.7 mg kg(-1) dw, respectively, largely accumulated because of the barrier effect of intermediate soil cover. This accumulation resulted in decreased microbial activities. The intermediate soil cover also caused significant reduction in moisture in MSW under the soil layer, which was as low as 25.9%, and led to inefficient biodegradation of 8- and 10-year-old MSW. Therefore, intermediate soil cover with low permeability seems to act as a barrier that divides a landfill into two landfill cells with different degradation processes by restraining water flow and hazardous matter. Copyright © 2013 Elsevier Ltd. All rights reserved.

Biophysical Factors Affecting the Distribution of Demersal Fish around the Head of a Submarine Canyon Off the Bonney Coast, South Australia

PubMed Central

Currie, David R.; McClatchie, Sam; Middleton, John F.; Nayar, Sasi

2012-01-01

We sampled the demersal fish community of the Bonney Canyon, South Australia at depths (100–1,500 m) and locations that are poorly known. Seventy-eight species of demersal fish were obtained from 12 depth-stratified trawls along, and to either side, of the central canyon axis. Distributional patterns in species richness and biomass were highly correlated. Three fish assemblage groupings, characterised by small suites of species with narrow depth distributions, were identified on the shelf, upper slope and mid slope. The assemblage groupings were largely explained by depth (ρw = 0.78). Compared to the depth gradient, canyon-related effects are weak or occur at spatial or temporal scales not sampled in this study. A conceptual physical model displayed features consistent with the depth zonational patterns in fish, and also indicated that canyon upwelling can occur. The depth zonation of the fish assemblage was associated with the depth distribution of water masses in the area. Notably, the mid-slope community (1,000 m) coincided with a layer of Antarctic Intermediate Water, the upper slope community (500 m) resided within the core of the Flinders Current, and the shelf community was located in a well-mixed layer of surface water (<450 m depth). PMID:22253907

Correlation between elastic energy density and deep earthquakes distribution

NASA Astrophysics Data System (ADS)

Gunawardana, P. M.; Morra, G.

2017-05-01

The mechanism at the origin of the earthquakes below 30 km remains elusive as these events cannot be explained by brittle frictional processes. In this work we focus on the global total distribution of earthquakes frequency vs. depth from ∼50 km to 670 km depth. We develop a numerical model of self-driven subduction by solving the non-homogeneous Stokes equation using the ;Particle in cell method; in combination with a conservative finite difference scheme, here solved for the first time using Python and NumPy only. We show that most of the elastic energy is stored in the slab core and that it is strongly correlated with the earthquake frequency-depth distribution for a wide range of lithosphere and lithosphere-core viscosities. According to our results, we suggest that 1) slab bending at the bottom of the upper mantle causes the peak of the earthquake frequency-depth distribution that is observed at mantle transition depth; 2) the presence of a high viscous stiff core inside the lithosphere generates an elastic energy distribution that fits better with the exponential decay that is observed at intermediate depth.

Visualization of Green's Function Anomalies for Megathrust Source in Nankai Trough by Reciprocity Method

NASA Astrophysics Data System (ADS)

Petukhin, A.; Miyakoshi, K.; Tsurugi, M.; Kawase, H.; Kamae, K.

2014-12-01

Effect of various areas (asperities or SMGA) in the source of a megathrust subduction zone earthquake on the simulated long-period ground motions is studied. For this case study we employed a source fault model proposed by HERP (2012) for future M9-class event in the Nankai trough. Velocity structure is 3-D JIVSM model developed for long-period ground motion simulations. The target site OSKH02 "Konohana" is located in center of the Osaka basin. Green's functions for large number of sub-sources (>1000) were calculated by FDM using the reciprocity approach. Depths, strike and dip angles of sub-sources are adjusted to the shape of upper boundary of the Philippine Sea plate. The target period range is 4-20sec. Strongly nonuniform distribution of peak amplitudes of Green's functions is observed (see Figure), and two areas have anomalously large amplitudes: (1) a large along-strike elongated area just south of Kii peninsula and (2) a similar area south of Kii peninsula but shifted toward the Nankai trough. Elongation of the first anomaly fits well 10-15km isolines of the depth distribution of the Philippine Sea plate, while target site is located in the direction perpendicular to these isolines. For this reason, preliminarily we suppose that plate shape may have critical effect on the simulated ground motions, via a cumulative effect of sub-source radiation patterns and specific strike and dip angle distributions. Analysis of the time delay of the peak arrivals at OKSH02 demonstrates that Green's functions from the second anomaly, located in shallow part of plate boundary, are mostly composed of surface waves.

Hydrologic data from the integrated lake-watershed acidification study in the west-central Adirondack Mountains, New York : October 1977 through January 1982

USGS Publications Warehouse

Peters, N.E.; Murdoch, Peter S.; Dalton, F.N.

1987-01-01

Hydrologic data were collected from three forested headwater lake watersheds in Herkimer and Hamilton Counties from October 1977 through early January 1982 as part of the Integrated Lake-Watersheds Acidification Study (ILWAS). ILWAS was established in 1977 to determine why these lakes differ in pH when all receive equal amounts of acidic atmospheric deposition. Woods Lake is acidic (pH ranges from 4 to 5), Panther Lake is neutral (pH ranges from 5 to 7.5), and Sagamore Lake is intermediate (pH ranges from 5 to 6). The data tabulated herein include discharge at the three lake outlets and in a tributary to each lake; lake-water stage at each lake; chemical quality of lake water, including total concentrations of zinc, iron, manganese, and lead, at each lake outlet and at Lost Brook (a tributary to Sagamore Lake); groundwater stage from 29 wells; major ion concentrations of groundwater from 22 of these wells; temperature of soil from three depths at one site in each watershed; soil-moisture tension at three depths at eight sites - four in the neutral-lake basin, three in the acidic-lake basin , and one in the intermediate-lake basin; and average snowpack depths and water equivalents at approximately 20 snow-course sites in each basin for three sampling periods during the 1979-80 winter. (USGS)

Refining the Tonga Slab Geometry Using Slab Phases of Seismic Waves

NASA Astrophysics Data System (ADS)

Alongi, T.; Wei, S. S.; Blackman, D. K.

2017-12-01

Although the Tonga subducting slab geometry has been previously mapped by earthquake distribution, its detailed morphology is poorly constrained. The uncertainties of the slab surface relative to earthquakes can be translated into large errors in predicted temperature of hypocenters that is considered as a chief control of intermediate-depth seismicity. Seismic waves converted at the interface between the slab crust and the overlying mantle wedge can provide additional constraints on the location of the slab surface. A PS phase converted at the slab interface is observable in the horizontal components, whereas an SP converted phase can be seen in the vertical component. In this study, we analyze PS and SP phases in the seismic dataset of the 2009-2010 Ridge2000 Lau Spreading Center project, which consisted of 50 ocean bottom seismographs (OBSs) and 17 island-based seismic stations deployed in Fiji, Tonga, and the Lau Basin for about one year. More than 1,000 PS arrivals from local events were manually picked, predominantly with a 1-3 Hz filter. Next, the PS-P differential travel times will be inverted to determine improved depths of the slab surface relative to the local earthquakes and the receiving stations. The refined slab geometry will allow us to assess the thermal structure and dehydration reactions of the Tonga slab, lending further insight into the mechanisms of intermediate-depth seismicity.

Distinct characteristics of the intermediate water observed off the east coast of Korea during two contrasting years

NASA Astrophysics Data System (ADS)

Nam, S.; Yoon, S.; Park, J. H.; Kim, Y. H.; Chang, K. I.

2016-02-01

The intermediate water known as `East Sea Intermediate Water' and its coastal mode `North Korea Cold Water' found south of the Subpolar Front (SF) is formed in the northern East (Japan) Sea, and its physical properties are known to be determined by wintertime air-sea interaction north of the SF. Hydrographic data collected off the coast bi-monthly from 1994 to 2011 show significant decadal oscillations in spiciness following isopycnals of intermediate water (27.1-27.2 sigma-theta typically corresponding to 150 m depth), which are explained by the Arctic Oscillation (AO) and consequent cold-air outbreaks. During positive AO phases over the decades, the cold-air outbreak and water formation are more active and the intermediate water having the same spiciness reaches higher density (higher spiciness following the same isopycnals). At interannual timescale, however, the spiciness variability is well beyond the relationship with the AO. Especially, significantly lower spiciness (or both less saline and lower temperature) intermediate water was observed in spring of 2010 than 2001 under the similar AO condition (negative peaks). Strong cooling with common negative peaks in surface net-heat flux (with different patterns) and common negative peaks in the AO index are prominent in winter of the two years over past two decades. Such contrasting characteristics of intermediate water between 2001 and 2010 are consistent with the HYCOM reanalysis results which, along with the satellite altimetry-derived sea surface height maps, indicates widespread extension of low (high) spiciness intermediate water in the southwestern East Sea in 2010 (2001). A clear contrast in circulation pattern, along with net-heat flux pattern, is suggested to derive the observational results in the distinctly different characteristics of the intermediate water.

eVoc Strategies: 10 Ways to Use Technology to Build Vocabulary

ERIC Educational Resources Information Center

Dalton, Bridget; Grisham, Dana L.

2011-01-01

Vocabulary knowledge is key to comprehension and expression. For students in the intermediate grades, the need for breadth and depth of vocabulary accelerates as they encounter more challenging academic texts in print and on the Internet. Drawing on research-based principles of vocabulary instruction and multimedia learning, this article presents…

Measuring soil moisture content non-invasively at intermediate spatial scale using cosmic-ray neutrons 1986

USDA-ARS?s Scientific Manuscript database

Soil moisture content on a horizontal scale of hectometers and at depths of decimeters can be inferred from measurements of low-energy cosmic-ray neutrons that are generated within soil, moderated mainly by hydrogen atoms, and diffused back to the atmosphere. These neutrons are sensitive to water co...

An in-depth comparison of the porcine, murine and human inflammasomes; lessons from the porcine genome and transcriptome

USDA-ARS?s Scientific Manuscript database

Emerging evidence suggests that swine are a scientifically acceptable intermediate species between rodents and humans to model immune function relevant to humans. The swine genome has recently been sequenced and several preliminary structural and functional analysis of the porcine immunome have been...

Weather. Learning in Science Project. Working Paper No. 21.

ERIC Educational Resources Information Center

Moyle, Ray

One area explored in the second (in-depth) phase of the Learning in Science Project was "children's science," defined as views of the world and the meanings for words that children have and bring with them to science lessons. The investigation reported focuses on primary, intermediate, and secondary students' (N=41) ideas about selected…

Relationship Between Far Field Stresses, Fluid Flow and High-Pressure Deserpentinization in Subducting Slabs: a Case Study From the Almirez Ultramafic Massif

NASA Astrophysics Data System (ADS)

Dilissen, Nicole; Hidas, Károly; Garrido, Carlos J.; López Sánchez-Vizcaíno, Vicente; Kahl, Wolf-Achim; Padrón-Navarta, José Alberto; Jesús Román-Alpiste, Manuel

2017-04-01

Serpentinite dehydration during prograde metamorphism plays a crucial role in subduction dynamics. Observations from exhumed paleo-subduction metamorphic terranes suggest that the discharge of deserpentinization fluids from the subducting slab takes place along different pathways and mechanisms [e.g. 1-3]. Analysis of intermediate-depth focal solutions in active subduction zones indicates that slabs are subjected to different principal stress fields characterized primarily by downdip compression and downdip tension [4]. Although it is well known that far field stresses play a crucial role on fluid flow channeling, their potential impact on the kinetics of serpentinite dehydration and subsequent fluid escape in subducting slabs is still poorly understood. Here, we present a detailed structural and microstructural study to investigate the relationships between far field stresses, fluid flow and high-pressure deserpentinization in the Almirez ultramafic massif (Betic Cordillera, SE Spain) [1, 2]. This massif preserves the high-pressure breakdown of antigorite (Atg-) serpentinite to prograde chlorite (Chl-) harzburgite, which are separated by a sharp isograd [2, 5]. The Chl-harzburgite reaction products show either a granofels or spinifex-like texture indicating crystallization under different overstepping of the Atg-out reaction. The two different textural types of Chl-harzburgite occur below the Atg-out isograd as alternating, meter-wide lenses with either a granofels or spinifex texture. From field measurements, we infer that during antigorite dehydration the minimum compressive stress was subnormal to the dehydration front and the paleo-slab surface. This stress field is consistent with subduction zones with slabs under downdip compression at intermediate depths [4]. The detailed microstructural study —combining µ-CT and EBSD-SEM [6]— of Chl-harzburgite across a c. 15 m wide lens reveals that the SPO and CPO of olivines with contrasting textures are strongly correlated with the inferred paleo-stress. The SPO of opaque phases and that of granofelsic olivine are aligned and have a single maximum in each sample. Across the studied lens these maxima are distributed along a plane that corresponds to the average orientation of Atg-serpentinite foliation in a nearby outcrop, and they show a strong maximum close to the intermediate compressive stress axis. Spinifex olivines form tablet-like crystals that are elongated parallel to [001]-axes in a plane perpendicular to their [100]-axes. These growth planes are oriented at high angle to the least compressional stress axis, and the olivine growth directions (i.e., [001]-axes) are dominantly oriented at the acute angle between the maximum and intermediate compressive stress axes. These results indicate that formation of spinifex crystals is preferred at enhanced reaction rates and it occurred along hydrofractures that opened as controlled by the stress field. Our data show that overpressured fluids escaped along the slab surface towards the maximum compression direction. We therefore propose that at periods of high fluid flux due to hydrofracturing in a dehydrating slab, the development of fluid network channels strongly depends on the principal stress field. REFERENCES 1. Padrón-Navarta, J.A., Tommasi, A., Garrido, C.J., López Sánchez-Vizcaíno, V., Gómez-Pugnaire, M.T., Jabaloy, A., Vauchez, A., 2010. Fluid transfer into the wedge controlled by high-pressure hydrofracturing in the cold top-slab mantle. Earth and Planetary Science Letters 297, 271-286. doi: 10.1016/j.epsl.2010.06.029. 2. Padrón-Navarta, J.A., López Sánchez-Vizcaíno, V., Garrido, C.J., Gómez-Pugnaire, M.T., 2011. Metamorphic Record of High-pressure Dehydration of Antigorite Serpentinite to Chlorite Harzburgite in a Subduction Setting (Cerro del Almirez, Nevado-Filábride Complex, Southern Spain). Journal of Petrology 52, 2047-2078. 3. Plümper, O., John, T., Podladchikov, Y.Y., Vrijmoed, J.C., Scambelluri, M., (in press). Fluid escape from subduction zones controlled by channel-forming reactive porosity. Nature Geoscience. 4. Chen, P.-F., Bina, C.R., Okal, E.A., 2004. A global survey of stress orientations in subducting slabs as revealed by intermediate-depth earthquakes. Geophysical Journal International 159, 721-733. 5. Padrón-Navarta, J.A., Tommasi, A., Garrido, C.J., López Sánchez-Vizcaíno, V., 2012. Plastic deformation and development of antigorite crystal preferred orientation in high-pressure serpentinites. Earth and Planetary Science Letters 349-350, 75-86. doi: 10.1016/j.epsl.2012.06.049 6. Kahl, W.-A., Hidas, K., Dilissen, N., Garrido, C.J., López-Sánchez Vizcaíno, V., Román-Alpiste, M.J. 2017. Reconstruction of the 3-D shape and crystal preferred orientation of olivine: a combined µ-CT and EBSD-SEM approach. Geophysical Research Abstracts 19, EGU2017-8061. Funding: Research leading to these results was funded by the EU-FP7 Marie Curie Initial Training Network ZIP - Zooming in between plates.

Microzooplankton biomass distribution in Terra Nova Bay, Ross Sea (Antarctica)

NASA Astrophysics Data System (ADS)

Fonda Umani, S.; Monti, M.; Nuccio, C.

1998-11-01

This work describes the spatial and vertical distribution of microzooplankton (20-200 μm) abundance and biomass of the upper layers (0-100 m), collected during the first oceanographic Italian expedition in Antarctica (1987/1988) in Terra Nova Bay (Ross Sea). Biomass was estimated by using biovolume calculations and literature conversion factors. Sampling was carried out at three depths, surface, 50 and 100 m. The dominant taxa were made up of tintinnid ciliates, ciliates other than tintinnids, larvae of micrometazoa and heterotrophic dinoflagellates. The abundance of the total microplankton fraction had its absolute maximum in the center of Terra Nova Bay at the surface with 31 042 ind. dm -3. The areal and vertical distribution of heterotrophic microplankton biomass differs from that of abundance. On the basis of hydrological conditions, phytoplankton composition and biomass and microzooplankton biomass and structure it is possible to identify three groups of stations: 1—northern coastal stations (intermediate chlorophyll maxima, microphytoplankton prevalence, low microzooplankton biomass); 2—central stations (high surface chlorophyll, nanoplankton prevalence, high abundance of microzooplankton); 3—northern stations (deeper pycnocline, nanoplankton prevalence, high microzooplankton biomass at intermediate depths).

Patterned basal seismicity shows sub-ice stream bedforms

NASA Astrophysics Data System (ADS)

Barcheck, C. G.; Tulaczyk, S. M.; Schwartz, S. Y.

2017-12-01

Patterns in seismicity emanating from the bottom of fast-moving ice streams and glaciers may indicate localized patches of higher basal resistance— sometimes called 'sticky spots', or otherwise varying basal properties. These seismogenic basal areas resist an unknown portion of the total driving stress of the Whillans Ice Plain (WIP), in West Antarctica, but may play an important role in the WIP stick-slip cycle and ice stream slowdown. To better understand the mechanism and importance of basal seismicity beneath the WIP, we analyze seismic data collected by a small aperture (< 3km) network of 8 surface and 5 borehole seismometers installed in the main central sticky spot of the WIP. We use a network beamforming technique to detect and roughly locate thousands of small (magnitude < 0), local basal micro-earthquakes in Dec 2014, and we compare the resulting map of seismicity to ice bottom depth measured by airborne radar. The number of basal earthquakes per area within the network is spatially heterogeneous, but a pattern of two 400m wide streaks of high seismicity rates is evident, with >50-500 earthquakes detected per 50x50m grid cell in 2 weeks. These seismically active streaks are elongated approximately in the ice flow direction with a spacing of 750m. Independent airborne radar measurements of ice bottom depth from Jan 2013 show a low-amplitude ( 5m) undulation in the basal topography superposed on a regional gradient in ice bottom depth. The flow-perpendicular wavelength of these low-amplitude undulations is comparable to the spacing of the high seismicity bands, and the streaks of high seismicity intersect local lows in the undulating basal topography. We interpret these seismic and radar observations as showing seismically active sub-ice stream bedforms that are low amplitude and elongated in the direction of ice flow, comparable to the morphology of mega scale glacial lineations (MSGLs), with high basal seismicity rates observed in the MSGL troughs. These results have implications for understanding the formation mechanism of MSGLS and well as understanding the interplay between basal topographic roughness, spatially varying basal till and hydrologic properties, basal resistance to fast ice flow, and ice stream stick-slip.

SU-E-T-370: Measurement of Conical Cone Output Factors for the Varian Edge Linear Accelerator

DOE Office of Scientific and Technical Information (OSTI.GOV)

Li, H; Kim, J; Gordon, J

Purpose: To quantify the impact of detector type, SSD/depth, and intermediate reference on conical cone output factor (OF) measurements for the Varian Edge linac. Methods: OF's for 4, 5, 7.5, 10, 12.5, 15, and 17.5 mm diameter cones relative to 10cmx10cm field were measured for the 6X FFF and 10X FFF energies, with jaws set to 5cmx5cm. Measurements were performed with an Edge diode (0.8mmx0.8mmx0.03mm WxLxT), stereotatic diode SFD, photon diode, CC01 and pinpoint chambers (2mm diameter for both). 95cm SSD/5cm depth were used in a water tank. For the measurement with diodes, OF's were cross-referred to CC13 ion chambermore » measurements with 3cmx3cm field, as recommended, to help mitigate the energy variation in diode response with field size. Results were compared to the representative data from Varian measured with Edge detector. With SFD, OF's at 98.5cm SSD/1.5cm depth and 90cm SSD/10cm depth were also measured. Results: OF's measured with the Edge detector matched within 1.3% (max diff) with the representative data from Varian. For the SFD, OF's matched within 1.3% for the 4, 5 and 17.5 mm cones and within 3.7% for the other cones. OF's with photon diode were within 1.3% except for the 4 and 5 mm cones where they were 8.1% and 3.7%, respectively. OF's for the CC01 and pinpoint chamber deviated up to 36% and 44%, respectively for the 4 mm cone. OF's after intermediate reference with 3cmx3cm field changed by 3.7% for SFD, 0.8% for photon diode, and 0.6% for Edge detector. OF's at 98.5cm SSD/1.5cm depth were 10.8% higher than that at 95cm SSD/5cm depth, and OF's at 90cm SSD/1.5cm depth were 7.5% lower. Conclusion: OF's measured with the Edge detector appear to be reliable. CC01 and pinpoint chambers do not appear suitable for measuring the small cone OF's. SSD/depth affects OF measurements significantly.« less

Rapid response to climate change in a marginal sea.

PubMed

Schroeder, K; Chiggiato, J; Josey, S A; Borghini, M; Aracri, S; Sparnocchia, S

2017-06-22

The Mediterranean Sea is a mid-latitude marginal sea, particularly responsive to climate change as reported by recent studies. The Sicily Channel is a choke point separating the sea in two main basins, the Eastern Mediterranean Sea and the Western Mediterranean Sea. Here, we report and analyse a long-term record (1993-2016) of the thermohaline properties of the Intermediate Water that crosses the Sicily Channel, showing increasing temperature and salinity trends much stronger than those observed at intermediate depths in the global ocean. We investigate the causes of the observed trends and in particular determine the role of a changing climate over the Eastern Mediterranean, where the Intermediate Water is formed. The long-term Sicily record reveals how fast the response to climate change can be in a marginal sea like the Mediterranean Sea compared to the global ocean, and demonstrates the essential role of long time series in the ocean.

Saltless solar pond

NASA Technical Reports Server (NTRS)

Lin, E. I. H. (Inventor)

1984-01-01

A solar pond adapted for efficiently trapping and storing radiant solar energy without the use of a salt concentration gradient in the pond is disclosed. A body of water which may be fresh, saline, relatively clear or turbid, is substantially covered by a plurality of floating honeycomb panels. The honeycomb panels are made of a material such as glass which is pervious to short wave solar radiation but impervious to infrared radiation. Each honeycomb panel includes a multitude of honeycomb cells. The honeycomb panels are divided into the elongated honeycomb cells by a multitude of intermediate plates disposed between a bottom plate and top plate of the panel. The solar pond is well suited for providing hot water of approximately 85 to 90 C temperature for direct heating applications, and for electrical power generation.

Choroid plexus carcinoma with neuronal and glial differentiation in a 7-week-old male Sprague-Dawley rat.

PubMed

Inohana, Mari; Eguchi, Ayumi; Nakamura, Misato; Nagahara, Rei; Watanabe, Yosuke; Yoshida, Toshinori; Shibutani, Makoto

2018-04-18

We describe a case of choroid plexus carcinoma arising in the cerebrum of a 7-week-old male Sprague-Dawley rat. The tumor mass occupied the right lateral ventricle of the cerebrum. Histological analyses revealed that the epithelial tumor cells had proliferated in tubular, cribriform, papillary and solid growth patterns in the vicinity of the choroid plexus, with slight invasion into the cerebrum parenchyma. We divided the tumor cells into cuboidal, elongated and intermediate cells. Immunohistochemical studies showed that these tumor cells expressed relatively high levels of cytokeratin AE1/AE3, vimentin and glial fibrillary acidic proteins, and low levels of nestin, oligodendrocyte transcription factor and doublecortin proteins. The present case was diagnosed as a choroid plexus carcinoma with neuronal and glial differentiation.

Gas Bubble Pinch-off in Viscous and Inviscid Liquids

NASA Astrophysics Data System (ADS)

Taborek, P.

2005-11-01

We have used high-speed video to analyze pinch-off of nitrogen gas bubbles in fluids with a wide range of viscosity. If the external fluid is highly viscous (ηext>100 cP), the radius is proportional to the time before break, τ, and decreases smoothly to zero. If the external fluid has low viscosity (ηext<10 cP), the neck radius scales as &1/2circ; until an instability develops in the gas bubble which causes the neck to rupture and tear apart. Finally, if the viscosity of the external fluid is in an intermediate range, an elongated thread is formed which breaks apart into micron-sized bubbles. 100,000 frame-per-second videos will be presented which illustrate each of these flow regimes.

Pavilion Lake, British Columbia, Canada - An investigation of potentially unique freshwater microbialites, and their application to Mars exploration.

NASA Astrophysics Data System (ADS)

Lim, D. S.; Laval, B.; Slater, G.; Andersen, D.; Airo, A.; Mullins, G.; Schulze-Makuch, D.; Cady, S.; McKay, C.

2005-12-01

Pavilion Lake, B. C., Canada has become the first target site of an on-going NASA effort to investigate the Mars analogue potential of terrestrial lacustrine carbonates. A combination of hypothesis and exploration driven research activities are underway to study the unusual freshwater microbialite structures found in this lake. These structures are of interest in terms of models of Precambrian reefs and may also be relevant to carbonate formation in ancient lakes on Mars. Laval et al. (2000) provides an overview of the morphological characteristics of the microbialites, and explores the physical limnology of Pavilion Lake. Several key hypotheses and questions related to the role of biology in the formation of the microbialites, and the effect of varying light levels on the microbialite morphologies have since resulted from Laval et al., but to date remain unanswered. In August 2004, the Pavilion Lake Research Project (PLRP) was established to commence a new round of investigations into Pavilion Lake, to test hypotheses concerning the factors controlling carbonate formation, and to collect further exploration data related to understanding the lake's limnology and development. Laval et al. classified the differing microbialite structures into four depth categories: shallow to intermediate (5-10m), intermediate (~20m), intermediate to deep (20-30m), and deep facies (30-35m). There is a variation of the morphology and mechanical strength of the structures with depth, which may reflect a change in the relative role of biotic and non-biotic precipitation with lowering light levels. Recent field investigations (August 2005) revealed carbonate structures at depths beyond what was reported in Laval et al. (2000). These new structures appear at 46-55m, and are morphologically distinct from the previously described microbialites. Here we present our current research activities at Pavilion Lake, along with recent data collection results. Excursions to the lake have included the use of SCUBA to sample collect and to install a variety of sensors including a thermistor chain and a Licor light meter. Seepage meters have also been placed in strategic regions of the lake to collect incoming lake groundwater for future chemical limnological analyses and hydrological mapping of the area. In addition, conventional Conductivity/Temperature/Depth (CTD) profiles and water sampling has been conducted during a winter and summer period, and will be presented here. Microbialite samples recovered from each of the discernible morphological depth transects have been investigated for relative variations in d13C isotopic signatures, and the results will presented here.

Anatomy of a subduction zone - seismicity structure of the northern Chilean forearc from >100,000 double-difference relocated earthquake hypocenters

NASA Astrophysics Data System (ADS)

Sippl, Christian; Schurr, Bernd

2017-04-01

We present a catalog of >100k well-located earthquake hypocenters for the northern Chilean forearc region, between the latitudes of 18.5°S and 24°S. The detected events cover the timespan 2007-2014 and were extracted from the IPOC permanent station network dataset. Previously published earthquake catalogs for the region contain significantly fewer earthquakes. Using this new, high-resolution set of hypocenters, we can outline the slab structure in unprecedented detail, allowing e.g. the determination of along-strike changes in slab dip angle or the resolution of structures inside the zone of intermediate-depth seismicity. For the compilation of the catalog, we relied on an automated multi-step process for event detection, association and phase picking. Thus retrieved earthquake hypocenters were then relocated in a 2.5D velocity model for the Northern Chile forearc region with a probabilistic approach that also allows the determination of uncertainties. In a final step, double-difference re-location incorporating cross-correlation lag times was performed, which sharpened event clusters through relative location. We estimate that the completeness magnitude of the catalog is around 3. The majority of all >100k earthquakes are located at intermediate depths (between 80 and 140 km) inside the subducted slab. This area of pervasive activity extends along the entire strike of the investigated area, but shows a clear offset at 21°S, which may hint at a slab tear at this location. Events of comparable hypocentral depths to the south of this offset are located further east than the ones to the north of it. Further updip, a triple seismic zone at depths between 40 and around 80 km is visible, which grades into the highly active event cluster at intermediate depths: below the plate interface, which is clearly delineated by seismic activity, a second parallel band of hypocenters only about 5 km below likely corresponds to earthquakes occurring within the oceanic crust or close to the oceanic Moho. A third band of earthquakes, paralleling the other two at about 20-25 km below the interface, clearly indicates the presence of seismicity in the oceanic lithospheric mantle. Seismicity in the upper plate is pervasive throughout the entire crustal thickness near the coast but gets shallower towards the volcanic arc. Shallow clusters related to regional mining activities are also clearly visible.

The combined use of 87Sr/86Sr and carbon and water isotopes to study the hydrochemical interaction between groundwater and lakewater in mantled karst

USGS Publications Warehouse

Katz, B.G.; Bullen, T.D.

1996-01-01

The hydrochemical interaction between groundwater and lakewater influences the composition of water that percolates downward from the surficial aquifer system through the underlying intermediate confining unit and recharges the Upper Floridan aquifer along highlands in Florida. The 87Sr/86Sr ratio along with the stable isotopes, D, 18O, and 13C were used as tracers to study the interaction between groundwater, lakewater, and aquifer minerals near Lake Barco, a seepage lake in the mantled karst terrane of northern Florida. Upgradient from the lake, the 87Sr/86Sr ratio of groundwater decreases with depth (mean values of 0.71004, 0.70890, and 0.70852 for water from the surficial aquifer system, intermediate confining unit, and Upper Floridan aquifer, respectively), resulting from the interaction of dilute oxygenated recharge water with aquifer minerals that are less radiogenic with depth. The concentrations of Sr2+ generally increase with depth, and higher concentrations of Sr2+ in water from the Upper Floridan aquifer (20-35 ??g/L), relative to water from the surficial aquifer system and the intermediate confining unit, result from the dissolution of Sr-bearing calcite and dolomite in the Eocene limestone. Dissolution of calcite [??13C = -1.6 permil (???)] is also indicated by an enriched ??13CDIC (-8.8 to - 11.4???) in water from the Upper Floridan aquifer, relative to the overlying hydrogeologic units (??13CDIC < - 16???). Groundwater downgradient from Lake Barco was enriched in 18O and D relative to groundwater upgradient from the lake, indicating mixing of lakewater leakage and groundwater. Downgradient from the lake, the 87Sr/86Sr ratio of groundwater and aquifer material become less radiogenic and the Sr2+ concentrations generally increase with depth. However, Sr2+ concentrations are substantially less than in upgradient groundwaters at similar depths. The lower Sr2+ concentrations result from the influence of anoxic lakewater leakage on the mobility of Sr2+ from clays. Based on results from mass-balance modeling, it is probable that cation exchange plays the dominant role in controlling the 87Sr/86Sr ratio of groundwater, both upgradient and downgradient from Lake Barco. Even though groundwater from the three distinct hydrogeologic units displays considerable variability in Sr concentration and isotopic composition, the dominant processes associated with the mixing of lakewater leakage with groundwater, as well as the effects of mineral-water interaction, can be ascertained by integrating the use of stable and radiogenic isotopic measurements of groundwater, lakewater, and aquifer minerals.

Slab Geometry and Stress State of the Southwestern Colombia Subduction Zone

NASA Astrophysics Data System (ADS)

Chang, Ying

A high rate of intermediate-depth earthquakes is concentrates in the Cauca cluster (3.5°N-5.5°N) and isolated from nearby seismicity in the southwestern Colombia subduction zone. Previously-studied nests of intermediate-depth earthquakes show that a high seismicity rate is often associated with a slab tear, detachment, or contortion. The cause of the less-studied Cauca cluster is unknown. To investigate the cause, we image the slab geometry using precise relative locations of intermediate-depth earthquakes. We use the earthquake catalog produced and seismic waveforms recorded by the Colombian National Seismic Network from January 2010 to March 2014. We calculate the focal mechanisms to examine whether the earthquakes reactivate pre-existing faults or form new fractures. The focal mechanisms are inverted for the intraslab stress field to check the stress guide hypothesis and to evaluate the stress orientations with regard to the change in the slab geometry. The earthquake relocations indicate that the Cauca segment has a continuous 20 km thick seismic zone and increases in dip angle from north to south. Two 40-km-tall fingers of earthquakes extend out of the slab and into the mantle wedge. Different from the previously-studied nests, the Cauca cluster does not correspond to slab contortions or tearing. The cluster may be associated with a high amount of dehydrated fluid. The determined focal mechanisms of 69 earthquakes have various types and variably-oriented nodal planes, corresponding to the reactivation of pre-existing faults and the formation of new fractures. The results of stress inversion show that the extensional axis in the northern Cauca segment is in the plane of the slab and 25° from the downdip direction, and the southern part has along-strike extension. The compression is subnormal to the plane of the slab. The stress field supports the stress guide hypothesis and shows a consistent rotation with increase in slab dip angle.

The influence of water table depth and the free atmospheric state on convective rainfall predisposition

DOE PAGES

Bonetti, Sara; Manoli, Gabriele; Domec, Jean-Christophe; ...

2015-03-16

Here, we report a mechanistic model for the soil-plant system is coupled to a conventional slab representation of the atmospheric boundary layer (ABL) to explore the role of groundwater table (WT) variations and free atmospheric (FA) states on convective rainfall predisposition (CRP) at a Loblolly pine plantation site situated in the lower coastal plain of North Carolina. Predisposition is quantified using the crossing between modeled lifting condensation level (LCL) and convectively grown ABL depth. The LCL-ABL depth crossing is necessary for air saturation but not sufficient for cloud formation and subsequent convective rainfall occurrence. However, such crossing forms the mainmore » template for which all subsequent dynamical processes regulating the formation (or suppression) of convective rainfall operate on. If the feedback between surface fluxes and FA conditions is neglected, a reduction in latent heat flux associated with reduced WT levels is shown to enhance the ABL-LCL crossing probability. When the soil-plant system is fully coupled with ABL dynamics thereby allowing feedback with ABL temperature and humidity, FA states remain the leading control on CRP. However, vegetation water stress plays a role in controlling ABL-LCL crossing when the humidity supply by the FA is within an intermediate range of values. When FA humidity supply is low, cloud formation is suppressed independent of surface latent heat flux. Similarly, when FA moisture supply is high, cloud formation can occur independent of surface latent heat flux. In an intermediate regime of FA moisture supply, the surface latent heat flux controlled by soil water availability can supplement (or suppress) the necessary water vapor leading to reduced LCL and subsequent ABL-LCL crossing. Lastly, it is shown that this intermediate state corresponds to FA values around the mode in observed humidity lapse rates γ w (between -2.5 × 10 -6 and -1.5 × 10 -6 kg kg -1m -1), suggesting that vegetation water uptake may be controlling CRP at the study site.« less

Plant root and shoot dynamics during subsurface obstacle interaction

NASA Astrophysics Data System (ADS)

Conn, Nathaniel; Aguilar, Jeffrey; Benfey, Philip; Goldman, Daniel

As roots grow, they must navigate complex underground environments to anchor and retrieve water and nutrients. From gravity sensing at the root tip to pressure sensing along the tip and elongation zone, the complex mechanosensory feedback system of the root allows it to bend towards greater depths and avoid obstacles of high impedance by asymmetrically suppressing cell elongation. Here we investigate the mechanical and physiological responses of roots to rigid obstacles. We grow Maize, Zea mays, plants in quasi-2D glass containers (22cm x 17cm x 1.4cm) filled with photoelastic gel and observe that, regardless of obstacle interaction, smaller roots branch off the primary root when the upward growing shoot (which contains the first leaf) reaches an average length of 40 mm, coinciding with when the first leaf emerges. However, prior to branching, contacts with obstacles result in reduced root growth rates. The growth rate of the root relative to the shoot is sensitive to the angle of the obstacle surface, whereby the relative root growth is greatest for horizontally oriented surfaces. We posit that root growth is prioritized when horizontal obstacles are encountered to ensure anchoring and access to nutrients during later stages of development. NSF Physics of Living Systems.

Different surface sensing of the cell body and nucleus in healthy primary cells and in a cancerous cell line on nanogrooves.

PubMed

Davidson, Patricia M; Bigerelle, Maxence; Reiter, Günter; Anselme, Karine

2015-10-01

Cancer cells are known to have alterations compared to healthy cells, but can these differences extend to the way cells interact with their environment? Here, the authors focused on the alignment on an array of grooves of nanometer depth using two cell types: healthy osteoprogenitor primary cells (HOP) and a cancerous osteosarcoma (SaOs-2) cell line. Another concern was how this alignment affects the cell's interior, namely, the nucleus. Based on the results, it is proposed that these two cell types respond to different size regimes: SaOs-2 cells are more sensitive to shallow grooves while HOP cells are strongly aligned with deep grooves. As a measure of the impact of cell alignment on the nucleus the orientation and elongation of the nucleus were determined. Compared to HOP cells, the cell nucleus of SaOs-2 cells is more aligned and elongated in response to grooves, suggesting a softer nucleus and/or increased force transmission. These results support the hypothesis that cancer cells have reduced nucleus rigidity compared to healthy ones and further indicate differences in sensing, which may be important during metastasis.

Distributed biotin–streptavidin transcription roadblocks for mapping cotranscriptional RNA folding

PubMed Central

Strobel, Eric J.; Nedialkov, Yuri; Artsimovitch, Irina

2017-01-01

Abstract RNA folding during transcription directs an order of folding that can determine RNA structure and function. However, the experimental study of cotranscriptional RNA folding has been limited by the lack of easily approachable methods that can interrogate nascent RNA structure at nucleotide resolution. To address this, we previously developed cotranscriptional selective 2΄-hydroxyl acylation analyzed by primer extension sequencing (SHAPE-Seq) to simultaneously probe all intermediate RNA transcripts during transcription by stalling elongation complexes at catalytically dead EcoRIE111Q roadblocks. While effective, the distribution of elongation complexes using EcoRIE111Q requires laborious PCR using many different oligonucleotides for each sequence analyzed. Here, we improve the broad applicability of cotranscriptional SHAPE-Seq by developing a sequence-independent biotin–streptavidin (SAv) roadblocking strategy that simplifies the preparation of roadblocking DNA templates. We first determine the properties of biotin–SAv roadblocks. We then show that randomly distributed biotin–SAv roadblocks can be used in cotranscriptional SHAPE-Seq experiments to identify the same RNA structural transitions related to a riboswitch decision-making process that we previously identified using EcoRIE111Q. Lastly, we find that EcoRIE111Q maps nascent RNA structure to specific transcript lengths more precisely than biotin–SAv and propose guidelines to leverage the complementary strengths of each transcription roadblock in cotranscriptional SHAPE-Seq. PMID:28398514

Structural characterization of ribosome recruitment and translocation by type IV IRES.

PubMed

Murray, Jason; Savva, Christos G; Shin, Byung-Sik; Dever, Thomas E; Ramakrishnan, V; Fernández, Israel S

2016-05-09

Viral mRNA sequences with a type IV IRES are able to initiate translation without any host initiation factors. Initial recruitment of the small ribosomal subunit as well as two translocation steps before the first peptidyl transfer are essential for the initiation of translation by these mRNAs. Using electron cryomicroscopy (cryo-EM) we have structurally characterized at high resolution how the Cricket Paralysis Virus Internal Ribosomal Entry Site (CrPV-IRES) binds the small ribosomal subunit (40S) and the translocation intermediate stabilized by elongation factor 2 (eEF2). The CrPV-IRES restricts tvhe otherwise flexible 40S head to a conformation compatible with binding the large ribosomal subunit (60S). Once the 60S is recruited, the binary CrPV-IRES/80S complex oscillates between canonical and rotated states (Fernández et al., 2014; Koh et al., 2014), as seen for pre-translocation complexes with tRNAs. Elongation factor eEF2 with a GTP analog stabilizes the ribosome-IRES complex in a rotated state with an extra ~3 degrees of rotation. Key residues in domain IV of eEF2 interact with pseudoknot I (PKI) of the CrPV-IRES stabilizing it in a conformation reminiscent of a hybrid tRNA state. The structure explains how diphthamide, a eukaryotic and archaeal specific post-translational modification of a histidine residue of eEF2, is involved in translocation.

Distributed biotin-streptavidin transcription roadblocks for mapping cotranscriptional RNA folding.

PubMed

Strobel, Eric J; Watters, Kyle E; Nedialkov, Yuri; Artsimovitch, Irina; Lucks, Julius B

2017-07-07

RNA folding during transcription directs an order of folding that can determine RNA structure and function. However, the experimental study of cotranscriptional RNA folding has been limited by the lack of easily approachable methods that can interrogate nascent RNA structure at nucleotide resolution. To address this, we previously developed cotranscriptional selective 2΄-hydroxyl acylation analyzed by primer extension sequencing (SHAPE-Seq) to simultaneously probe all intermediate RNA transcripts during transcription by stalling elongation complexes at catalytically dead EcoRIE111Q roadblocks. While effective, the distribution of elongation complexes using EcoRIE111Q requires laborious PCR using many different oligonucleotides for each sequence analyzed. Here, we improve the broad applicability of cotranscriptional SHAPE-Seq by developing a sequence-independent biotin-streptavidin (SAv) roadblocking strategy that simplifies the preparation of roadblocking DNA templates. We first determine the properties of biotin-SAv roadblocks. We then show that randomly distributed biotin-SAv roadblocks can be used in cotranscriptional SHAPE-Seq experiments to identify the same RNA structural transitions related to a riboswitch decision-making process that we previously identified using EcoRIE111Q. Lastly, we find that EcoRIE111Q maps nascent RNA structure to specific transcript lengths more precisely than biotin-SAv and propose guidelines to leverage the complementary strengths of each transcription roadblock in cotranscriptional SHAPE-Seq. © The Author(s) 2017. Published by Oxford University Press on behalf of Nucleic Acids Research.

Light Scattering Characterization of Elastin-Like Polypeptide Trimer Micelles

NASA Astrophysics Data System (ADS)

Tsuper, Ilona; Terrano, Daniel; Maraschky, Adam; Holland, Nolan; Streletzky, Kiril

The elastin-like polypeptides (ELP) nanoparticles are composed of three-armed star polypeptides connected by a negatively charged foldon. Each of the three arms extending from the foldon domain includes 20 repeats of the (GVGVP) amino acid sequence. The ELP polymer chains are soluble at room temperature and become insoluble at the transition temperature (close to 50 ° C), forming micelles. The size and shape of the micelle are dependent on the temperature and the pH of the solution, and on the concentration of the phosphate buffered saline (PBS). The depolarized dynamic light scattering (DDLS) was employed to study the structure and dynamics of micelles at 62 ° C. The solution was maintained at an approximate pH level of 7.3 - 7.5, while varying PBS concentration. At low salt concentrations (<15 mM), the micelle radius was about 10nm but not very reproducible on account of unstable pH levels arising from low buffer concentrations. At intermediate salt concentrations (15 - 60 mM), the system formed spherically-shaped micelles, exhibiting a steady growth in the hydrodynamic radius (Rh) from 10 to 21 nm, with increasing PBS concentration. Interestingly, higher salt concentrations (>60 mM) displayed an apparent elongation of the micelles evident by a significant VH signal, along with a surge in the apparent Rh. A model of micelle growth (and potential elongation) with increase in salt concentration is considered.

Morphological response to competition for light in the clonal Trifolium repens (Fabaceae).

PubMed

Bittebiere, Anne-Kristel; Renaud, Nolwenn; Clément, Bernard; Mony, Cendrine

2012-04-01

Plant communities in temperate zones are dominated by clonal plants that can plastically modify their growth characteristics in response to competition. Given that plants compete with one another, and the implications this has for species coexistence, we conducted a study to assess how clonal species morphologically respond to competition for light depending on its intensity and heterogeneity, which are determined by the competitor species. We assessed the morphological response to competition for light of the clonal species Trifolium repens L. by measuring its growth performance, and vertical and horizontal growth traits. We used five competitive environments, i.e., one without competitor and four differing by their competitor species creating different conditions of competition intensity and heterogeneity. The morphological response of Trifolium repens to competition for light depended on the competitor identity. Competition intensity and heterogeneity, determined by competitor identity, had an interactive effect on most traits. The increase in petiole elongation and specific leaf area due to increased competition intensity was observed only at low to intermediate competition heterogeneity. Competition heterogeneity promoted the elongation of clone connections allowing space exploration. Our results demonstrated that the intensity and heterogeneity of competition, which depended on competitor identity, are of primary importance in determining the plastic response of Trifolium repens. This emphasizes that it is important to consider the fine-scale spatial distribution of individuals when studying their interactions within plant communities.

Numerical simulation of scouring-deposition variations caused by rainfall-induced landslides in the upstream of Zengwun River, Taiwan

NASA Astrophysics Data System (ADS)

Lee, Ming-Hsi; Liao, Yi-Wen; Tsai, Kuang-Jung

2017-04-01

In recent years, the increasing sediment disasters of severe rainfall-induced landslides on human lives and lifeline facilities worldwide have advanced the necessity to find out both economically acceptable and useful techniques to predict the occurrence and destructive power of the disasters. In August 2009, Typhoon Morakot brought a large amount of rainfall with both high intensity and long duration to a vast area of Taiwan. Unfortunately, this resulted in a catastrophic landslide in watershed of Zengwun-River reservoir, southern Taiwan. Meanwhile, large amounts of landslides were formed in the upstream of Zengwun River. The major scope of this study is to apply numerical model to simulate the scouring-deposition variations caused by rainfall-induced landslides that occurred in the upstream of Zengwun River during Typhoon Morakot. This study proposed the relation diagrams of the intermediate diameter (d50), recurrence interval (T) and scouring-deposition depth (D), and applied the diagrams to understand the impacts of the scouring-deposition variations on the structures for water and soil conservation and their measurements. Based on the simulation of scouring-deposition variation at the Da-Bu dam and Da-Bang dam, this study also discussed the scouring-deposition variations of different sections under different scenarios (including flow rate, intermediate diameters and structures). In summary, the result suggested that the diagrams of the intermediate diameter, recurrence interval and scouring-deposition depth could be used as the reference for designing the check dams, ground sills and lateral constructions.

Excess total organic carbon in the intermediate water of the South China Sea and its export to the North Pacific

NASA Astrophysics Data System (ADS)

Dai, Minhan; Meng, Feifei; Tang, Tiantian; Kao, Shu-Ji; Lin, Jianrong; Chen, Junhui; Huang-Chuan, Jr.; Tian, Jiwei; Gan, Jianping; Yang, Shuang

2009-12-01

Depth profiles of total organic carbon (TOC) were measured in spring (2005) and winter (2006) in the South China Sea (SCS), the largest marginal sea adjacent to the North Western Pacific (NWP). Compared to TOC profiles in the NWP, excess TOC (3.2 ± 1.1 μmol kg-1) was revealed in the intermediate layer of the SCS at σθ ˜ 27.2-27.6 (˜1000-1500 m). Below the depth of 2000 m, TOC concentrations were identical between the SCS and the NWP. Based on a one-dimensional steady state diffusion advection model constrained by potential temperature, we estimated a net TOC production rate of 0.12 ± 0.04 μmol kg-1 yr-1 to maintain this excess. A positive relationship between TOC and apparent oxygen utilization in the SCS deep water lent support to such a model-derived TOC production. This excess TOC in the out-flowing intermediate water may carry 3.1 ± 2.1 Tg C yr-1 of organic carbon out from the SCS and potentially into the deep open ocean. In light of the short residence time of the SCS deep water, the exported TOC was likely from the recently fixed organic carbon within the SCS. The export of such organic carbon, thereby less likely to return to the atmosphere may therefore contribute significantly to the carbon sequestration in the SCS.

Seismic variability of subduction thrust faults: Insights from laboratory models

NASA Astrophysics Data System (ADS)

Corbi, F.; Funiciello, F.; Faccenna, C.; Ranalli, G.; Heuret, A.

2011-06-01

Laboratory models are realized to investigate the role of interface roughness, driving rate, and pressure on friction dynamics. The setup consists of a gelatin block driven at constant velocity over sand paper. The interface roughness is quantified in terms of amplitude and wavelength of protrusions, jointly expressed by a reference roughness parameter obtained by their product. Frictional behavior shows a systematic dependence on system parameters. Both stick slip and stable sliding occur, depending on driving rate and interface roughness. Stress drop and frequency of slip episodes vary directly and inversely, respectively, with the reference roughness parameter, reflecting the fundamental role for the amplitude of protrusions. An increase in pressure tends to favor stick slip. Static friction is a steeply decreasing function of the reference roughness parameter. The velocity strengthening/weakening parameter in the state- and rate-dependent dynamic friction law becomes negative for specific values of the reference roughness parameter which are intermediate with respect to the explored range. Despite the simplifications of the adopted setup, which does not address the problem of off-fault fracturing, a comparison of the experimental results with the depth distribution of seismic energy release along subduction thrust faults leads to the hypothesis that their behavior is primarily controlled by the depth- and time-dependent distribution of protrusions. A rough subduction fault at shallow depths, unable to produce significant seismicity because of low lithostatic pressure, evolves into a moderately rough, velocity-weakening fault at intermediate depths. The magnitude of events in this range is calibrated by the interplay between surface roughness and subduction rate. At larger depths, the roughness further decreases and stable sliding becomes gradually more predominant. Thus, although interplate seismicity is ultimately controlled by tectonic parameters (velocity of the plates/trench and the thermal regime), the direct control is exercised by the resulting frictional properties of the plate interface.

Detection of Intermediate Mediterranean Waters in the Atlantic Ocean by ARGO Floats Data

NASA Astrophysics Data System (ADS)

Filyushkin, B. N.; Lebedev, K. V.; Kozhelupova, N. G.

2017-11-01

Peculiarities of the spatial distribution of intermediate Mediterranean waters (MW), which are the main source to maintain the heat and salt budgets at depths of 600-1500 m in the Atlantic Ocean, have been studied using the ARGO floats measurements database. About 75000 temperature and salinity profiles recorded by 900 ARGO floats in 2005-2014 in the Atlantic Ocean for latitudes from 20° to 50° N were used. To process these data, we used the ARGO-Based Model for Investigation of the Global Ocean (AMIGO). This technique allowed us for the first time to obtain a complete set of oceanographic characteristics up to a depth of 2000 m for different time averaging intervals (month, season, years). Joint analysis of the temperature, salinity, and velocity distributions at 700-1000 m depths made it possible to revise the distribution of MW and their penetration into the western part of the ocean across the Mid-Atlantic Ridge (MAR). It is shown that at depths of 700 and 1000 m, the Mid-Atlantic Ridge is a barrier to advective propagation of salty waters (>35.5 PSU) to the west and is transparent to fragments of destroyed intrathermocline lenses (ITL) with lower salinity (<35.4 PSU). In the Atlantic region, from 20° to 35° N and from 30° to 70° W, individual lens profiles with an anomalous salinity distribution were sought using ARGO measurements to detect ITL and its separate fragments. About 24 000 measurements from 370 ARGO floats were analyzed, and only about 3% of them showed weak salinity anomalies at 800-1200 m depths. No ITL were found from these observations. Analysis of long-term drifting of individual floats recording temperature and salinity profiles with anomalous layers made it possible to study the nature of MW transport through the MAR.

Organic matter transformation in the peat column at Marcell Experimental Forest: Humification and vertical stratification

NASA Astrophysics Data System (ADS)

Tfaily, Malak M.; Cooper, William T.; Kostka, Joel E.; Chanton, Patrick R.; Schadt, Christopher W.; Hanson, Paul J.; Iversen, Colleen M.; Chanton, Jeffrey P.

2014-04-01

We characterized peat decomposition at the Marcell Experimental Forest (MEF), Minnesota, USA, to a depth of 2 m to ascertain the underlying chemical changes using Fourier transform infrared (FT IR) and 13C nuclear magnetic resonance (NMR) spectroscopy) and related these changes to decomposition proxies C:N ratio, δ13C and δ15N, bulk density, and water content. FT IR determined that peat humification increased rapidly between 30 and 75 cm, indicating a highly reactive intermediate-depth zone consistent with changes in C:N ratio, δ13C and δ15N, bulk density, and water content. Peat decomposition at the MEF, especially in the intermediate-depth zone, is mainly characterized by preferential utilization of O-alkyl-C, carboxyl-C, and other oxygenated functionalities with a concomitant increase in the abundance of alkyl- and nitrogen-containing compounds. Below 75 cm, less change was observed but aromatic functionalities and lignin accumulated with depth. Significant correlations with humification indices, identified by FT IR spectroscopy, were found for C:N ratios. Incubation studies at 22°C revealed the highest methane production rates, greatest CH4:CO2 production ratios, and significant O-alkyl-C utilization within this 30 and 75 cm zone. Oxygen-containing functionalities, especially O-alkyl-C, appear to serve as excellent proxies for soil decomposition rate and should be a sensitive indicator of the response of the solid phase peat to increased temperatures caused by climate change and the field study manipulations that are planned to occur at this site. Radiocarbon signatures of microbial respiration products in deeper pore waters at the MEF resembled the signatures of more modern dissolved organic carbon rather than solid phase peat, indicating that recently photosynthesized organic matter fueled the bulk of subsurface microbial respiration. These results indicate that carbon cycling at depth at the MEF is not isolated from surface processes.

Lagrangian circulation study near Cape Henry, Virginia. [Chesapeake Bay

NASA Technical Reports Server (NTRS)

Johnson, R. E.

1981-01-01

A study of the circulation near Cape Henry, Virginia, was made using surface and seabed drifters and radar tracked surface buoys coupled to subsurface drag plates. Drifter releases were conducted on a line normal to the beach just south of Cape Henry. Surface drifter recoveries were few; wind effects were strongly noted. Seabed drifter recoveries all exhibited onshore motion into Chesapeake Bay. Strong winds also affected seabed recoveries, tending to move them farther before recovery. Buoy trajectories in the vicinity of Cape Henry appeared to be of an irrotational nature, showing a clockwise rotary tide motion. Nearest the cape, the buoy motion elongated to almost parallel depth contours around the cape. Buoy motion under the action of strong winds showed that currents to at least the depth of the drag plates substantially are altered from those of low wind conditions near the Bay mouth. Only partial evidence could be found to support the presence of a clockwise nontidal eddy at Virginia Beach, south of Cape Henry.

Outcome Analysis of Patients With Oral Cavity Cancer and Extracapsular Spread in Neck Lymph Nodes

DOE Office of Scientific and Technical Information (OSTI.GOV)

Liao, Chun-Ta, E-mail: liaoct@adm.cgmh.org.tw; Department of Head and Neck Oncology Group, Chang Gung Memorial Hospital and Chang Gung University, Taoyuan, Taiwan; Lee, Li-Yu

Purpose: Extracapsular spread (ECS) in neck lymph nodes is a major adverse prognostic factor in patients with oral cavity squamous cell carcinoma (OSCC). We conducted a retrospective analysis of prognostic factors in this patient group and tried to identify a subset of patients with a worse prognosis suitable for more aggressive therapeutic interventions. Methods and Materials: Enrolled in the study were 255 OSCC patients with ECS in neck nodes and without evidence of distant metastasis. All participants were followed-up for at least 2 years or censored at last follow-up. The 5-year rates of control, distant metastasis, and survival were themore » main outcome measures. Results: Level IV/V lymph node metastases and tumor depth {>=}12 mm were independent predictors of 5-year survival and identified three prognostic groups. In the low-risk group (no level IV/V metastases and tumor depth <12 mm), the 5-year disease-free, disease-specific, and overall survival rates were 60%, 66%, and 50%, respectively. In the intermediate-risk group (no level IV/V metastases and tumor depth {>=}12 mm), the 5-year disease-free, disease-specific, and overall survival rates were 39%, 41%, and 28%, respectively. In the high-risk group (evidence of level IV/V metastases), the 5-year disease-free, disease-specific, and overall survival rates were 14%, 12%, and 10%, respectively. Conclusions: Among OSCC patients with ECS, those with level IV/V metastases appear to have the worst prognosis followed by without level IV/V metastases and tumor depth {>=}12 mm. An aggressive therapeutic approach may be suitable for intermediate- and high-risk patients.« less

An Assessment of Southern Ocean Water Masses and Sea Ice During 1988-2007 in a Suite of Interannual CORE-II Simulations

NASA Technical Reports Server (NTRS)

Downes, Stephanie M.; Farneti, Riccardo; Uotila, Petteri; Griffies, Stephen M.; Marsland, Simon J.; Bailey, David; Behrens, Erik; Bentsen, Mats; Bi, Daohua; Biastoch, Arne;

High-Resolution P'P' Precursor Imaging of Nazca-South America Plate Boundary Zones and Inferences for Transition Zone Temperature and Composition

NASA Astrophysics Data System (ADS)

Gu, Y. J.; Schultz, R.

2013-12-01

Knowledge of upper mantle transition zone stratification and composition is highly dependent on our ability to efficiently extract and properly interpret small seismic arrivals. A promising high-frequency seismic phase group particularly suitable for a global analysis is P'P' precursors, which are capable of resolving mantle structures at vertical and lateral resolution of approximately 5 and 200 km, respectively, owing to their shallow incidence angle and small, quasi-symmetric Fresnel zones. This study presents a simultaneous analysis of SS and P'P' precursors based on deconvolution, Radon transform and depth migration. Our multi-resolution survey of the mantle near Nazca-South America subduction zone reveals both olivine and garnet related transitions at depth below 400 km. We attribute a depressed 660 to thermal variations, whereas compositional variations atop the upper-mantle transition zone are needed to explain the diminished or highly complex reflected/scattered signals from the 410 km discontinuity. We also observe prominent P'P' reflections within the transition zone, especially near the plate boundary zone where anomalously high reflection amplitudes result from a sharp (~10 km thick) mineral phase change resonant with the dominant frequency of the P'P' precursors. Near the base of the upper mantle, the migration of SS precursors shows no evidence of split reflections near the 660-km discontinuity, but potential majorite-ilmenite (590-640 km) and ilmenite-perovskite transitions (740-750 km) are identified based on similarly processed high-frequency P'P' precursors. At nominal mantle temperatures these two phase changes may be seismically indistinguishable, but colder mantle conditions from the descending Nazca plate, the presence of water and variable Fe contents may cause sufficient separation for a reliable analysis. In addition, our preliminary results provide compelling evidence for multiple shallow lower-mantle reflections (at ~800 km) along the elongated plate boundary zones of South America. Slab stagnation at the base of the transition zone could play a key role, though a proper interpretation of this finding would likely entail compositional (rather than strictly thermal) variations in the vicinity of the descending oceanic crust and lithosphere. Overall, the resolution and sensitivity differences between low/intermediate- S and high-frequency P wave reflections are key considerations toward reconciling seismic and mineralogical models of transition zone structure, both at the study location and worldwide.

The geochemical and petrological characteristics of prenatal caldera volcano: a case of the newly formed small dacitic caldera, Hijiori, Northeast Japan

NASA Astrophysics Data System (ADS)

Miyagi, Isoji; Kita, Noriko; Morishita, Yuichi

2017-09-01

Evaluating the magma depth and its physical properties is critical to conduct a better geophysical assessment of magma chambers of caldera volcanoes that may potentially cause future volcanic hazards. To understand pre-eruptive conditions of a magma chamber before its first appearance at the surface, this paper describes the case of Hijiori caldera volcano in northeastern Japan, which emerged approximately 12,000 years ago at a place where no volcano ever existed. We estimated the depth, density, bulk modulus, vesicularity, crystal content, and bulk H_2O content of the magma chamber using petrographic interpretations, bulk and microchemical compositions, and thermodynamic calculations. The chemical mass balance calculations and thermodynamic modeling of the erupted magmas indicate that the upper portion of the Hijiori magmatic plumbing system was located at depths between 2 and 4 km, and had the following characteristics: (1) pre-eruptive temperature: about 780 °C; (2) bulk magma composition: 66 ± 1.5 wt% SiO2; (3) bulk magmatic H_2O: approximately 2.5 wt%, and variable characteristics that depend on depth; (4) crystal content: ≤57 vol%; (5) bulk modulus of magma: 0.1-0.8 GPa; (6) magma density: 1.8-2.3 g/cm3; and (7) amount of excess magmatic H_2O: 11-32 vol% or 48-81 mol%. The range of melt water contents found in quartz-hosted melt inclusions (2-9 wt%) suggests the range of depth phenocrysts growth to be wide (2˜13 km). Our data suggest the presence of a vertically elongated magma chamber whose top is nearly solidified but highly vesiculated; this chamber has probably grown and re-mobilized by repeated injections of a small amount of hot dacitic magma originated from the depth.

Observations of pockmark flow structure in Belfast Bay, Maine, Part 1: current-induced mixing

USGS Publications Warehouse

Fandel, Christina L.; Lippmann, Thomas C.; Irish, James D.; Brothers, Laura L.

2017-01-01

Field observations of current profiles and temperature, salinity, and density structure were used to examine vertical mixing within two pockmarks in Belfast Bay, Maine. The first is located in 21 m water depth (sea level to rim), nearly circular in shape with a 45 m rim diameter and 12 m rim-to-bottom relief. The second is located in 25 m water depth, more elongated in shape with an approximately 80 m (36 m) major (minor) axis length at the rim, and 17 m relief. Hourly averaged current profiles were acquired from bottom-mounted acoustic Doppler current profilers deployed on the rim and center of each pockmark over successive 42 h periods in July 2011. Conductivity–temperature–depth casts at the rim and center of each pockmark show warmer, fresher water in the upper water column, evidence of both active and fossil thermocline structure 5–8 m above the rim, and well-mixed water below the rim to the bottom. Vertical velocities show up- and down-welling events that extend into the depths of each pockmark. An observed temperature change at both the rim and center occurs coincident with an overturning event below the rim, and suggests active mixing of the water column into the depths of each pockmark. Vertical profiles of horizontal velocities show depth variation at both the center and rim consistent with turbulent logarithmic current boundary layers, and suggest that form drag may possibly be influencing the local flow regime. While resource limitations prevented observation of the current structure and water properties at a control site, the acquired data suggest that active mixing and overturning within the sampled pockmarks occur under typical benign conditions, and that current flows are influenced by upstream bathymetric irregularities induced by distant pockmarks.

The evolutionary origin of feathers.

PubMed

Regal, P J

1975-03-01

Previous theories relating the origin of feathers to flight or to heat conservation are considered to be inadequate. There is need for a model of feather evolution that gives attention to the function and adaptive advantage of intermediate structures. The present model attempts to reveal and to deal with, the spectrum of complex questions that must be considered. In several genera of modern lizards, scales are elongated in warm climates. It is argued that these scales act as small shields to solar radiation. Experiments are reported that tend to confirm this. Using lizards as a conceptual model, it is argued that feathers likewise arose as adaptations to intense solar radiation. Elongated scales are assumed to have subdivided into finely branched structures that produced a heat-shield, flexible as well as long and broad. Associated muscles had the function of allowing the organism fine control over rates of heat gain and loss: the specialized scales or early feathers could be moved to allow basking in cool weather or protection in hot weather. Subdivision of the scales also allowed a close fit between the elements of the insulative integument. There would have been mechanical and thermal advantages to having branches that interlocked into a pennaceous structure early in evolution, so the first feathers may have been pennaceous. A versatile insulation of movable, branched scales would have been a preadaptation for endothermy. As birds took to the air they faced cooling problems despite their insulative covering because of high convective heat loss. Short glides may have initially been advantageous in cooling an animal under heat stress, but at some point the problem may have shifted from one of heat exclusion to one of heat retention. Endothermy probably evolved in conjunction with flight. If so, it is an unnecessary assumption to postulate that the climate cooled and made endothermy advantageous. The development of feathers is complex and a model is proposed that gives attention to the fundamental problems of deriving a branched structure with a cylindrical base from an elongated scale.

Relationships between root diameter, root length and root branching along lateral roots in adult, field-grown maize

PubMed Central

Wu, Qian; Pagès, Loïc; Wu, Jie

2016-01-01

Background and Aims Root diameter, especially apical diameter, plays an important role in root development and function. The variation in diameter between roots, and along roots, affects root structure and thus the root system’s overall foraging performance. However, the effect of diameter variation on root elongation, branching and topological connections has not been examined systematically in a population of high-order roots, nor along the roots, especially for mature plants grown in the field. Methods A method combining both excavation and analysis was applied to extract and quantify root architectural traits of adult, field-grown maize plants. The relationships between root diameter and other root architectural characteristics are analysed for two maize cultivars. Key Results The basal diameter of the lateral roots (orders 1–3) was highly variable. Basal diameter was partly determined by the diameter of the bearing segment. Basal diameter defined a potential root length, but the lengths of most roots fell far short of this. This was explained partly by differences in the pattern of diameter change along roots. Diameter tended to decrease along most roots, with the steepness of the gradient of decrease depending on basal diameter. The longest roots were those that maintained (or sometimes increased) their diameters during elongation. The branching density (cm–1) of laterals was also determined by the diameter of the bearing segment. However, the location of this bearing segment along the mother root was also involved – intermediate positions were associated with higher densities of laterals. Conclusions The method used here allows us to obtain very detailed records of the geometry and topology of a complex root system. Basal diameter and the pattern of diameter change along a root were associated with its final length. These relationships are especially useful in simulations of root elongation and branching in source–sink models. PMID:26744490

Aphidicolin-induced nuclear elongation in tobacco BY-2 cells.

PubMed

Yasuhara, Hiroki; Kitamoto, Kazuki

2014-05-01

Plant nuclei are known to differentiate into various shapes within a single plant. However, little is known about the mechanisms of nuclear morphogenesis. We found that nuclei of tobacco BY-2 cells were highly elongated on long-term treatment with 5 mg l⁻¹ aphidicolin, an inhibitor of DNA polymerase α. In aphidicolin-treated cells, the nuclear length was correlated with the cell length. During culture in the presence of aphidicolin, the nuclei were elongated in parallel with cell elongation. Nuclear elongation was inhibited by the inhibition of cell elongation with 2,6-dichlorobenzonitrile, a cellulose synthesis inhibitor. However, cell elongation induced in the auxin-depleted medium in the absence of aphidicolin did not cause nuclear elongation, indicating that cell elongation alone is not sufficient for nuclear elongation. Treatment with either latrunculin B or propyzamide inhibited the aphidicolin-induced nuclear elongation, indicating that both actin filaments and microtubules (MTs) are required for nuclear elongation. Observations using BY-YTHCLR2 cells, in which actin filaments, MTs and nuclei were simultaneously visualized, revealed that the longitudinally arranged MT bundles associated with the nucleus play an important role in nuclear elongation, and that actin filaments affect the formation of these MT bundles. In aphidicolin-treated cells, the nuclear DNA contents of the elongated nuclei exceeded 4C, and the nuclear length was highly correlated with the nuclear DNA content. In cells treated with 50 mg l⁻¹ aphidicolin, cells were elongated and nucleus-associated longitudinal MT bundles were formed, but the nuclear DNA contents did not exceed 4C and the nuclei did not elongate. These results indicate that an increase in the nuclear DNA content above 4C is also required for nuclear elongation.

Vegetation change alters soil profile δ15N values at the landscape scale in a subtropical savanna

NASA Astrophysics Data System (ADS)

Zhou, Y.; Mushinski, R. M.; Hyodo, A.; Wu, X. B.; Boutton, T. W.

2017-12-01

The assessment of spatial variation in soil δ15N could provide integrative insights on soil N cycling processes across multiple spatial scales. However, little is known about spatial patterns of δ15N within soil profiles in arid and semiarid ecosystems, especially those undergoing vegetation change with a distinct shift in dominance and/or functional type. We quantified how changes from grass to woody plant dominance altered spatial patterns of δ15N throughout a 1.2 m soil profile by collecting 320 spatially-specific soil cores in a 160 m × 100 m subtropical savanna landscape that has undergone encroachment by Prosopis glandulosa (an N2-fixer) during the past century. Leaf δ15N was comparable among different plant life-forms, while fine roots from woody species had significantly lower δ15N than herbaceous species across this landscape. Woody encroachment significantly decreased soil δ15N throughout the entire soil profile, and created horizontal spatial patterns of soil δ15N that strongly resembled the spatial distribution of woody patches and were evident within each depth increment. The lower soil δ15N values that characterized areas beneath woody canopies were mostly due to the encroaching woody species, especially the N2-fixer P. glandulosa, which delivered 15N-depleted organic matter via root turnover to soils along the profile. Soil δ15N increased with depth, reached maximum values at an intermediate depth, and decreased at greater depths. Higher δ15N values at intermediate soil depths were correlated with the presence of a subsurface clay-rich argillic horizon across this landscape which may favor more rapid rates of N-cycling processes that can cause N losses and 15N enrichment of the residual soil N. These results indicate that succession from grassland to woodland has altered spatial variation in soil δ15N across the landscape and to considerable depth, suggesting significant changes in the relative rates of N-inputs vs. N-losses in this subtropical system after vegetation change.

Enhancing Learners' Emotions in an L2 Context through Emotionalized Dynamic Assessment

ERIC Educational Resources Information Center

Abdolrezapour, Parisa; Tavakoli, Mansoor; Ketabi, Saeed

2013-01-01

The aim of this study was to gain more in-depth understanding of students' emotions in an EFL context by applying dynamic assessment (DA) procedures to the development of learners' emotional intelligence. The study with 50 intermediate learners aged 12-15 used three modalities: a control group, which was taught under institute's normal procedures;…

Interpreting inverse magnetic fabric in dikes from Eastern Iceland

NASA Astrophysics Data System (ADS)

Trippanera, Daniele; Urbani, Stefano; Porreca, Massimiliano; Acocella, Valerio; Kissel, Catherine; Sagnotti, Leonardo; Winkler, Aldo

2017-04-01

Since the 70's magnetic fabric analysis has been used to infer magma emplacement in dikes. However, the interpretation of magmatic flow orientation in dikes is often complicated by the occurrence of anomalous (i.e. inverse) magnetic fabric. This latter may either reflect the presence of single-domain (SD) grains or result from peculiar orientation mechanisms of magnetic minerals in magmas of different viscosities. Tertiary dike swarms of extinct volcanic systems in Eastern Iceland represent the ideal case study to clarify the origin of anomalous magnetic fabric. Here we present the results of a multidisciplinary study on dikes belonging to the Alftafjordur volcanic system (Eastern Iceland), including a: (1) structural field study in order to identify kinematic and thermal indicators of dikes; (2) anisotropy of low-field magnetic susceptibility (AMS) analysis, to investigate the magnetic fabric and reconstruct the flow direction of 25 dikes; (3) first order reversal curve (FORC) diagrams and thermomagnetic properties of selected dikes to define the magnetic mineralogy; (4) petrofabric and image analyses at different microscopic scales to investigate the origin of the magnetic fabric and compare the AMS results with mineral texture. Our results show that half of the dikes show a well defined inverse magnetic fabrics (k max orthogonal to the dike margins) and anomalous high anisotropy degrees. Only 7 dikes have a normal magnetic fabric and other 6 dikes have an intermediate magnetic fabric. No clear prevalence of SD grains, which could explain the inverse magnetic fabric, was observed. On the contrary, petrofabric and thermomagnetic analysis reveal the presence of low Ti-content coarse magnetite and high Ti-content elongated magnetite grains as the main contributors to most of the observed magnetic fabrics. In particular, the orientation of the elongated high Ti-content magnetite grains, though usually scattered, is partly comparable with that of the maximum and minimum axes of the AMS ellipsoids, suggesting that the preferential orientation of these minerals represent the main source of inverse and intermediate magnetic fabrics. The results of this study demonstrate that the interpretation of the magnetic fabric is not always straightforward and the origin of anomalous fabrics may be related to a variety of physical and chemical processes during magma emplacement.

Did Antarctic Intermediate Water in the Southeast Pacific expanded vertically or only deepened?

NASA Astrophysics Data System (ADS)

Martinez-Mendez, G.; Lamy, F.; Mohtadi, M.; Hebbeln, D.

2017-12-01

Paleoceanographic and modelling studies have demonstrated in the last few years that deep waters are not the single protagonists in the global circulation scheme. Intermediate waters also play various and important roles. Particularly, the Antarctic Intermediate Water (AAIW) is key for the ventilation of mid-depths and thermocline levels, with its influence being noticeable till the eastern equatorial Pacific; it is involved in rapid reorganizations of the Global Circulation and also, most plausibly, in trapping and releasing atmospheric CO2 on glacial-interglacial time scales. In recent years, several records about the past variability of the AAIW have been published while they all lay at the lower edges of the influence of this water mass and, hence, mostly only conclusions about the AAIW variability at its deep boundary could be drawn. Here we present a novel record covering several glacial-interglacial cycles from the upper levels of this water mass. Site GeoB15020 was drilled with the MARUM Sea floor drill rig (MeBo) off Chile (27.29°S; 71.05°W) at 550 m water depth (core length: 78 meters composite depth). We will present δ18O, δ13C downcore records and Mg/Ca-derived ambient temperature from peak interglacial and peak glacial periods. The records will be compared with published results from Site GeoB15016 (Martínez-Méndez et al., 2013), which lays at nearly the same position but at 956 m water depth, i.e. both cores bound the main tongue of AAIW today. The results of GeoB15016 had shown increase presence of the AAIW at the site, but it was not possible to relate unequivocally this increased presence to a deepening of the core of the AAIW or to an increase in production. Results from GeoB15020 will allow answering that dichotomy. In addition, actual changes in the intrinsic characteristics of the AAIW are poorly constrained. Therefore, we will additionally present high resolution (multi-decadal time scales) δ18O, δ13C and Sortable Silt records from core GeoB3359-3 (35.23°S; 72.81°W, 678 m, 380 cm core length) to investigate fluctuations within the core of AAIW from the Last Glacial Maximum to the present and relate those to the changes observed downstream.

Chemical composition, water vapor permeability, and mechanical properties of yuba film influenced by soymilk depth and concentration.

PubMed

Zhang, Siran; Lee, Jaesang; Kim, Yookyung

2018-03-01

Yuba is a soy protein-lipid film formed during heating of soymilk. This study described yuba as an edible film by analyzing its chemical composition, water vapor permeability (WVP), and mechanical properties. Three yuba films were prepared by using different concentrations and depths of soymilk: HS (86 g kg -1 and 2.3 cm), LS (70 g kg -1 and 2.3 cm), and LD (70 g kg -1 and 3.0 cm). As yuba was successively skimmed, the protein, lipid, and SH content decreased, but carbohydrate and SS content increased. Though both the initial concentration and the depth of soymilk affect the properties of the films, the depth of soymilk influences WVP and tensile strength (TS) more. The WVP of the HS and LS changed the least (13-17 g mm kPa -1 m -2 day 1 ), while that of the LD changed the most (13-35 g mm kPa -1 m -2 day -1 ). There were no differences (P > 0.05) in the TS between the HS and LS. LD had the greatest decrease of TS and the lowest TS among the groups. The earlier the yuba films were collected, the greater the elongation of the films was: 129% (HS), 113% (LS), and 155% (LD). The initial concentration and the depth of soymilk changed the chemical composition and structure of the yuba films. The LS yuba produced more uniform edible films with good mechanical properties. © 2017 Society of Chemical Industry. © 2017 Society of Chemical Industry.

Time-resolved distance determination by tryptophan fluorescence quenching: probing intermediates in membrane protein folding.

PubMed

Kleinschmidt, J H; Tamm, L K

1999-04-20

The mechanism of insertion and folding of an integral membrane protein has been investigated with the beta-barrel forming outer membrane protein A (OmpA) of Escherichia coli. This work describes a new approach to this problem by combining structural information obtained from tryptophan fluorescence quenching at different depths in the lipid bilayer with the kinetics of the refolding process. Experiments carried out over a temperature range between 2 and 40 degrees C allowed us to detect, trap, and characterize previously unidentified folding intermediates on the pathway of OmpA insertion and folding into lipid bilayers. Three membrane-bound intermediates were found in which the average distances of the Trps were 14-16, 10-11, and 0-5 A, respectively, from the bilayer center. The first folding intermediate is stable at 2 degrees C for at least 1 h. A second intermediate has been isolated at temperatures between 7 and 20 degrees C. The Trps move 4-5 A closer to the center of the bilayer at this stage. Subsequently, in an intermediate that is observable at 26-28 degrees C, the Trps move another 5-10 A closer to the center of the bilayer. The final (native) structure is observed at higher temperatures of refolding. In this structure, the Trps are located on average about 9-10 A from the bilayer center. Monitoring the evolution of Trp fluorescence quenching by a set of brominated lipids during refolding at various temperatures therefore allowed us to identify and characterize intermediate states in the folding process of an integral membrane protein.

Evidence of a Weakly Absorbing Intermediate Mode of Aerosols in AERONET Data from Saharan and Sahelian Sites

NASA Technical Reports Server (NTRS)

Gianelli, Scott M.; Lacis, Andrew A.; Carlson, Barbara E.; Hameed, Sultan

2013-01-01

Accurate retrievals of aerosol size distribution are necessary to estimate aerosols' impact on climate and human health. The inversions of the Aerosol Robotic Network (AERONET) usually retrieve bimodal distributions. However, when the inversion is applied to Saharan and Sahelian dust, an additional mode of intermediate size between the coarse and fine modes is sometimes seen. This mode explains peculiarities in the behavior of the Angstrom exponent, along with the fine mode fraction retrieved using the spectral deconvolution algorithm, observed in a March 2006 dust storm. For this study, 15 AERONET sites in northern Africa and on the Atlantic are examined to determine the frequency and properties of the intermediate mode. The mode is observed most frequently at Ilorin in Nigeria. It is also observed at Capo Verde and multiple sites located within the Sahel but much less frequently at sites in the northern Sahara and the Canary Islands. The presence of the intermediate mode coincides with increases in Angstrom exponent, fine mode fraction, single-scattering albedo, and to a lesser extent percent sphericity. The Angstrom exponent decreases with increasing optical depth at most sites when the intermediate mode is present, but the fine mode fraction does not. Single-scattering albedo does not steadily decrease with fine mode fraction when the intermediate mode is present, as it does in typical mixtures of dust and biomass-burning aerosols. Continued investigation is needed to further define the intermediate mode's properties, determine why it differs from most Saharan dust, and identify its climate and health effects.

Light and temperature sensing and signaling in induction of bud dormancy in woody plants.

PubMed

Olsen, Jorunn E

2010-05-01

In woody species cycling between growth and dormancy must be precisely synchronized with the seasonal climatic variations. Cessation of apical growth, resulting from exposure to short photoperiod (SD) and altered light quality, is gating the chain of events resulting in bud dormancy and cold hardiness. The relative importance of these light parameters, sensed by phytochromes and possibly a blue light receptor, varies with latitude. Early in SD, changes in expression of light signaling components dominate. In Populus active shoot elongation is linked to high expression of FLOWERING LOCUS T (FT) resulting from coincidence of high levels of CONSTANS and light at the end of days longer than a critical one. In Picea, PaFT4 expression increases substantially in response to SD. Thus, in contrast to Populus-FT, PaFT4 appears to function in inhibition of shoot elongation or promotion of growth cessation. Accordingly, different FT-genes appear to have opposite effects in photoperiodic control of shoot elongation. Reduction in gibberellin under SD is involved in control of growth cessation and bud formation, but not further dormancy development. Coinciding with formation of a closed bud, abscisic acid activity increases and cell-proliferation genes are down-regulated. When dormancy is established very few changes in gene expression occur. Thus, maintenance of dormancy is not dependent on comprehensive transcriptional regulation. In some species low temperature induces growth cessation and dormancy, in others temperature affects photoperiod requirement. The temperature under SD affects both the rate of growth cessation, bud formation and depth of dormancy. As yet, information on the molecular basis of these responses to temperature is scarce.

Effect of pressure difference on the quality of titanium casting.

PubMed

Watanabe, I; Watkins, J H; Nakajima, H; Atsuta, M; Okabe, T

1997-03-01

In casting titanium using a two-compartment casting machine, Herø et al. (1993) reported that the pressure difference between the melting chamber and the mold chamber affected the soundness of the castings. This study tested the hypothesis that differences in pressure produce castings with various amounts of porosity and different mechanical properties values. Plastic dumbbell-shaped patterns were invested with an alumina-based, phosphate-bonded investment material. Both chambers of the casting machine were evacuated to 6 x 10(-2) torr; the argon pressure difference was then adjusted to either 50, 150, 300, or 450 torr. The porosity of the cast specimens was determined by x-ray radiography and quantitative image analysis. Tensile strength and elongation were measured by means of a universal testing machine at a strain rate of 1.7 x 10(-4)/s. The fractured surfaces were examined by SEM. Changes in Vickers hardness with depth from the cast surface were measured on polished cross-sections of the specimens. Raising the argon pressure difference to 300 and 450 torr caused a significant increase in internal porosity and a resultant decrease in the engineering tensile strength and elongation. The highest tensile strength (approximately 540 MPa), elongation (approximately 10%), bulk hardness (HV50g 209), and lowest porosity level (approximately 0.8%) occurred in the specimens cast at 150 torr. Turbulence of the metal during casting was thought to be responsible for the increase in porosity levels with the increase in argon pressure difference. By choosing an argon pressure difference (around 150 torr) suitable for this geometry, we could produce castings which have adequate mechanical properties and low porosity levels.

Development of high strength and high ductility nanostructured TWIP steel

NASA Astrophysics Data System (ADS)

Kou, Hong Ning

Strength and ductility are two exclusive mechanical properties of structural materials. One challenge for material research is to develop bulk nanostructured metals with simultaneous high strength and good ductility. To meet this objective, steels with twinning induced plasticity (TWIP) effect are selected for surface mechanical attrition treatment (SMAT) in this study. Tensile tests reveal extremely high yield strength and simultaneously sufficient ductility in these SMATed TWIP steel samples. With the duration increase of SMAT, both yield strength and tensile strength firstly monotonically increase to a maximum value of 2.25GPa with 18% total elongation. However, further increase of SMAT duration results in decreases of both strength and elongation. The excellent ductility of coarse-grained TWIP steels is attributed to the instantaneous generation of deformation twins in tension. Based on this, an interesting hierarchically tertiary twinning system is revealed by TEM/HRTEM in SMATed samples, composed of multi-scale twins respectively produced by annealing treatment, SMAT and tensile deformation. On one hand, boundaries of hierarchical twins with different orientations form three-dimensional networks that restrict each other and act as strong barriers to dislocation motion, leading to ultrahigh strength. On the other hand, stress concentration is relieved due to deformation transfer caused by twinning from grain to grain, resulting in large plasticity. Therefore, the hierarchical twinning structure is regarded as the most effective element that induces both extraordinary ultrahigh strength and good elongation in SMATed TWIP. The stable austenite also contributes to the preservation of good ductility. Martensite is only observed in SMATed TWIP by longest SMAT duration. Another route of fabricating nanostructured TWIP is performed by combining SMAT and thermomechanical treatment. The interval heat treatment between double SMAT benefits the total elongation to over 50%, with 980 MPa yield strength. Nanograins are observed at 60mum depth, different from their usual emergence on top surface. Martensitic phase transformation is discovered. Most nanostructured SMATed TWIP samples demonstrate typical ductile fractures with large quantities of dimples in different sizes, following the same trend of gradient grains. Long SMAT duration produces slight brittle crack with tearing ribs. Microvoids coalescence with manganese carbides leads to final rupture.

Simulation of collisional transport processes and the stability of planetary rings

NASA Technical Reports Server (NTRS)

Brophy, Thomas G.; Esposito, Larry W.

1989-01-01

The utility of the phase-space fluid method for the study of planetary ring dynamics is presently demonstrated through the numerical solution of a model kinetic equation for a flattened Keplerian disk. Attention is given to ringlets composed of single-sized particles, as well as to ringlets composed of two different-sized particles; in the latter case, the ringlets evolve in such a way that the lighter particles are confined by the heavier ones. The results obtained indicate that some natural process may sharpen the optical depth profile of edges even without an external forcing mechanism, and that intermediate optical depths are dynamically preferred in some cases.

Zinc coated sheet steel for press hardening

NASA Astrophysics Data System (ADS)

Ghanbari, Zahra N.

Galvanized steels are of interest to enhance corrosion resistance of press-hardened steels, but concerns related to liquid metal embrittlement have been raised. The objective of this study was to assess the soak time and temperature conditions relevant to the hot-stamping process during which Zn penetration did or did not occur in galvanized 22MnB5 press-hardening steel. A GleebleRTM 3500 was used to heat treat samples using hold times and temperatures similar to those used in industrial hot-stamping. Deformation at both elevated temperature and room temperature were conducted to assess the coating and substrate behavior related to forming (at high temperature) and service (at room temperature). The extent of alloying between the coating and substrate was assessed on undeformed samples heat treated under similar conditions to the deformed samples. The coating transitioned from an α + Gamma1 composition to an α (bcc Fe-Zn) phase with increased soak time. This transition likely corresponded to a decrease in availability of Zn-rich liquid in the coating during elevated temperature deformation. Penetration of Zn into the substrate sheet in the undeformed condition was not observed for any of the processing conditions examined. The number and depth of cracks in the coating and substrate steel was also measured in the hot-ductility samples. The number of cracks appeared to increase, while the depth of cracks appeared to decrease, with increasing soak time and increasing soak temperature. The crack depth appeared to be minimized in the sample soaked at the highest soak temperature (900 °C) for intermediate and extended soak times (300 s or 600 s). Zn penetration into the substrate steel was observed in the hot-ductility samples soaked at each hold temperature for the shortest soak time (10 s) before being deformed at elevated temperature. Reduction of area and elongation measurements showed that the coated sample soaked at the highest temperature and longest soak time maintained the highest ductility when compared to the uncoated sample processed under the sample conditions. Fractography of the hot-ductility samples showed features associated with increased ductility with increased soak time for all soak temperatures. Heat treatments (without elevated temperature deformation) and subsequent room temperature deformation were conducted to investigate the "in-service" behavior of 22MnB5. The uncoated and coated specimens deformed at room temperature showed similar ultimate tensile strength and ductility values. The only notable differences in the room temperature mechanical behavior of uncoated and coated samples processed under the same conditions were a result of differences in the substrate microstructure. All samples appeared to have ductile fracture features; features characteristic of liquid metal embrittlement were not observed.

Non-toric extended depth of focus contact lenses for astigmatism and presbyopia correction

NASA Astrophysics Data System (ADS)

Ben Yaish, Shai; Zlotnik, Alex; Yehezkel, Oren; Lahav-Yacouel, Karen; Belkin, Michael; Zalevsky, Zeev

2010-02-01

Purpose: Testing whether the extended depth of focus technology embedded on non-toric contact lenses is a suitable treatment for both astigmatism and presbyopia. Methods: The extended depth of focus pattern consisting of microndepth concentric grooves was engraved on a surface of a mono-focal soft contact lens. These grooves create an interference pattern extending the focus from a point to a length of about 1mm providing a 3.00D extension in the depth of focus. The extension in the depth of focus provides high quality focused imaging capabilities from near through intermediate and up to far ranges. Due to the angular symmetry of the engraved pattern the extension in the depth of focus can also resolve regular as well as irregular astigmatism aberrations. Results: The contact lens was tested on a group of 8 astigmatic and 13 subjects with presbyopia. Average correction of 0.70D for astigmatism and 1.50D for presbyopia was demonstrated. Conclusions: The extended depth of focus technology in a non-toric contact lens corrects simultaneously astigmatism and presbyopia. The proposed solution is based upon interference rather than diffraction effects and thus it is characterized by high energetic efficiency to the retina plane as well as reduced chromatic aberrations.

Organic matter pools, C turnover and meiofaunal biodiversity in the sediments of the western Spitsbergen deep continental margin, Svalbard Archipelago

NASA Astrophysics Data System (ADS)

Pusceddu, A.; Carugati, L.; Gambi, C.; Mienert, J.; Petani, B.; Sanchez-Vidal, A.; Canals, M.; Heussner, S.; Danovaro, R.

2016-01-01

We investigated organic matter (OM) quantity, nutritional quality and degradation rates, as well as abundance and biodiversity of meiofauna and nematodes along the deep continental margin off Spitsbergen, in the Svalbard Archipelago. Sediment samples were collected in July 2010 and 2011 along a bathymetric gradient between 600 m and 2000 m depth, and total mass flux measured at the same depths from July 2010 to July 2011. In both sampling periods sedimentary OM contents and C degradation rates increased significantly with water depth, whereas OM nutritional quality was generally higher at shallower depths, with the unique exception at 600 m depth in 2010. Meiofaunal abundance and biomass (largely dominated by nematodes) showed the highest values at intermediate depths (ca 1500 m) in both sampling periods. The richness of meiofaunal higher taxa and nematode species richness did not vary significantly with water depth in both sampling periods. We suggest here that patterns in OM quantity, C degradation rates, and meiofauna community composition in 2011 were likely influenced by the intensification of the warm West Spitsbergen Current (WSC). We hypothesize that the intensity of the WSC inflow to the Arctic Ocean could have an important role on benthic biodiversity and functioning of deep-sea Arctic ecosystems.

Tree-regeneration and mortality patterns and hydrologic change in a forested karst wetland--Sinking Pond, Arnold Air Force Base, Tennessee

USGS Publications Warehouse

Wolfe, William J.; Evans, Jonathan P.; McCarthy, Sarah; Gain, W. Scott; Bryan, Bradley A.

2004-01-01

Multiple lines of evidence point to climate change as the driving factor suppressing tree regeneration since 1970 in Sinking Pond, a 35-hectare seasonally flooded karst depression located on Arnold Air Force Base near Manchester, Tennessee. Annual censuses of 162-193 seedling plots from 1997 through 2001 demonstrate that the critical stage for tree survival is the transition from seedling to sapling and that this transition is limited to shallow (less than 0.5 meters) ponding depths. Recruitment of saplings to the small adult class also was restricted to shallow areas. Analysis of the spatial and elevation distribution of tree-size classes in a representative 2.3-hectare area of Sinking Pond showed a general absence of overcup oak saplings and young adults in deep (ponding depth greater than 1 meter) and intermediate (ponding depth 0.5-1 meter) areas, even though overcup oak seedlings and mature trees are concentrated in these areas. Analysis of tree rings from 45 trees sampled in a 2.3-hectare spatial-analysis plot showed an even distribution of tree ages across ponding-depth classes from the 1800s through 1970, followed by complete suppression of recruitment in deep and intermediate areas after 1970. Trees younger than 30 years were spatially and vertically concentrated in a small area with shallow ponding depth, about 0.5 meter below the spillway elevation. Results of hydrologic modeling, based on rainfall and temperature records covering the period January 1854 through September 2002, show ponding durations after 1970 considerably longer than historical norms, across ponding-depth classes. This increase in ponding duration corresponds closely with similar increases documented in published analyses of streamflow and precipitation in the eastern United States and with the suppression of tree regeneration at ponding depths greater than 0.5 meter indicated by tree-ring analysis. Comparison of the simulated stage record for Sinking Pond with the ages and elevations of sampled trees shows that prolonged (200 days or more per year) inundation in more than 2 of the first 5 years after germination is inversely related to successful tree recruitment and that such inundation was rare before 1970 and common afterwards.

Gibberellin biosynthesis and signal transduction is essential for internode elongation in deepwater rice

PubMed Central

Ayano, Madoka; Kani, Takahiro; Kojima, Mikiko; Sakakibara, Hitoshi; Kitaoka, Takuya; Kuroha, Takeshi; Angeles-Shim, Rosalyn B; Kitano, Hidemi; Nagai, Keisuke; Ashikari, Motoyuki

2014-01-01

Under flooded conditions, the leaves and internodes of deepwater rice can elongate above the water surface to capture oxygen and prevent drowning. Our previous studies showed that three major quantitative trait loci (QTL) regulate deepwater-dependent internode elongation in deepwater rice. In this study, we investigated the age-dependent internode elongation in deepwater rice. We also investigated the relationship between deepwater-dependent internode elongation and the phytohormone gibberellin (GA) by physiological and genetic approach using a QTL pyramiding line (NIL-1 + 3 + 12). Deepwater rice did not show internode elongation before the sixth leaf stage under deepwater condition. Additionally, deepwater-dependent internode elongation occurred on the sixth and seventh internodes during the sixth leaf stage. These results indicate that deepwater rice could not start internode elongation until the sixth leaf stage. Ultra-performance liquid chromatography tandem mass-spectrometry (UPLC-MS/MS) method for the phytohormone contents showed a deepwater-dependent GA1 and GA4 accumulation in deepwater rice. Additionally, a GA inhibitor abolished deepwater-dependent internode elongation in deepwater rice. On the contrary, GA feeding mimicked internode elongation under ordinary growth conditions. However, mutations in GA biosynthesis and signal transduction genes blocked deepwater-dependent internode elongation. These data suggested that GA biosynthesis and signal transduction are essential for deepwater-dependent internode elongation in deepwater rice. Deepwater rice obtained the ability for rapid internode elongation to avoid drowning and adapt to flooded condition. How does it regulate internode elongation? Using both physiological and genetic approach, this paper shows that the plant hormone, gibberellin (GA) regulates internode elongation. PMID:24891164

Foraminiferal assemblages from a transitional tropical upwelling zone in the Golfe d'Arguin, Mauritania

NASA Astrophysics Data System (ADS)

Reymond, Claire E.; Mateu-Vicens, Guillem; Westphal, Hildegard

2014-07-01

With the growing pressure of eutrophication in tropical regions, the Mauritian shelf provides a natural situation to understand the variability in mesotrophic assemblages. Site-specific dynamics occur throughout the 1200 m depth gradient. The shallow assemblages divide into three types of warm-water mesotrophic foraminiferal assemblages, which is not only a consequence of high primary productivity restricting light to the benthos but due to low pore water oxygenation, shelf geomorphology, and sediment partitioning. In the intermediate depth (approx. 500 m), the increase in foraminiferal diversity is due to the cold-water coral habitat providing a greater range of micro niches. Planktonic species characterise the lower bathyal zone, which emphasizes the reduced benthic carbonate production at depth. Although, due to the strong hydrodynamics within the Golf, planktonic species occur in notable abundances through out the whole depth gradient. Overall, this study can easily be compared to other tropical marine settings investigating the long-term effects of tropical eutrophication and the biogeographic distribution of carbonate producing organisms.

Relating Line Width and Optical Depth for CO Emission in the Large Mgellanic Cloud

NASA Astrophysics Data System (ADS)

Wojciechowski, Evan; Wong, Tony; Bandurski, Jeffrey; MC3 (Mapping CO in Molecular Clouds in the Magellanic Clouds) Team

2018-01-01

We investigate data produced from ALMA observations of giant molecular clouds (GMCs) located in the Large Magellanic Cloud (LMC), using 12CO(2–1) and 13CO(2–1) emission. The spectral line width is generally interpreted as tracing turbulent rather than thermal motions in the cloud, but could also be affected by optical depth, especially for the 12CO line (Hacar et al. 2016). We compare the spectral line widths of both lines with their optical depths, estimated from an LTE analysis, to evaluate the importance of optical depth effects. Our cloud sample includes two regions recently published by Wong et al. (2017, submitted): the Tarantula Nebula or 30 Dor, an HII region rife with turbulence, and the Planck cold cloud (PCC), located in a much calmer environment near the fringes of the LMC. We also include four additional LMC clouds, which span intermediate levels of star formation relative to these two clouds, and for which we have recently obtained ALMA data in Cycle 4.

Detection of Intermediates And Kinetic Control During Assembly of Bacteriophage P22 Procapsid

DOE Office of Scientific and Technical Information (OSTI.GOV)

Tuma, R.; Tsuruta, H.; French, K.H.

2009-05-26

Bacteriophage P22 serves as a model for the assembly and maturation of other icosahedral double-stranded DNA viruses. P22 coat and scaffolding proteins assemble in vitro into an icosahedral procapsid, which then expands during DNA packaging (maturation). Efficient in vitro assembly makes this system suitable for design and production of monodisperse spherical nanoparticles (diameter {approx} 50 nm). In this work, we explore the possibility of controlling the outcome of assembly by scaffolding protein engineering. The scaffolding protein exists in monomer-dimer-tetramer equilibrium. We address the role of monomers and dimers in assembly by using three different scaffolding proteins with altered monomer-dimer equilibriummore » (weak dimer, covalent dimer, monomer). The progress and outcome of assembly was monitored by time-resolved X-ray scattering, which allowed us to distinguish between closed shells and incomplete assembly intermediates. Binding of scaffolding monomer activates the coat protein for assembly. Excess dimeric scaffolding protein resulted in rapid nucleation and kinetic trapping yielding incomplete shells. Addition of monomeric wild-type scaffold with excess coat protein completed these metastable shells. Thus, the monomeric scaffolding protein plays an essential role in the elongation phase by activating the coat and effectively lowering its critical concentration for assembly.« less

Structure of the kidney of Bufo arenarum: intermediate segment, distal tubule and collecting tubule.

PubMed

Farías, Alejandro; Hermida, Gladys Noemí; Fiorito, Luisa Eleonora

2003-04-01

The ultrastructure of the intermediate segment (IS), distal tubule and collecting tubule (CT) of the south american toad Bufo arenarum, was studied by light and transmission electron microscopy. The IS is composed of cubical ciliated cells which propel the urine along the renal tubule. The distal tubule is divided into two portions: the early distal tubule (EDT) and the late distal tubule (LDT). The EDT is characterized by only one type of cells with well developed basolateral interdigitations and numerous elongated mitochondria, which are oriented normal to the basal surface. The "macula densa--like" is a specialized zone of the EDT in contact with the vascular pole, where cells are more tightly packed than in the rest of the tubule. The LDT shows two types of cells called dark and light cells according to the appearance of their cytoplasm. Dark cells have microplicae and few but long microvilli at their luminal surface, and abundant mitochondria in their cytoplasm. Light cells show basal and lateral infoldings and few mitochondria. The CT, which is composed of dark and light cells, exhibits an enlarged lumen with an undulated surface and dilated spaces between neighbouring cells. This work is a contribution to the knowledge of the kidney of B. arenarum; frequently used as an experimental model for physiological and biochemical studies.

A ketoreductase domain in the PksJ protein of the bacillaene assembly line carries out both α- and β-ketone reduction during chain growth

PubMed Central

Calderone, Christopher T.; Bumpus, Stefanie B.; Kelleher, Neil L.; Walsh, Christopher T.; Magarvey, Nathan A.

2008-01-01

The polyketide signaling metabolites bacillaene and dihydrobacillaene are biosynthesized in Bacillus subtilis on an enzymatic assembly line with both nonribosomal peptide synthetase (NRPS) and polyketide synthase (PKS) modules acting along with catalytic domains servicing the assembly line in trans. These signaling metabolites possess the unusual starter unit α-hydroxyisocaproate (α-HIC). We show here that it arises from initial activation of α-ketoisocaproate (α-KIC) by the first adenylation domain of PksJ (a hybrid PKS/NRPS) and installation on the pantetheinyl arm of the adjacent thiolation (T) domain. The α-KIC unit is elongated to α-KIC-Gly by the second NRPS module in PksJ as demonstrated by mass spectrometric analysis. The third module of PksJ uses PKS logic and contains an embedded ketoreductase (KR) domain along with two adjacent T domains. We show that this KR domain reduces canonical 3-ketobutyryl chains but also the α-keto group of α-KIC-containing intermediates on the PksJ T-domain doublet. This KR activity accounts for the α-HIC moiety found in the dihydrobacillaene/bacillaene pair and represents an example of an assembly-line dual-function α- and β-KR acting on disparate positions of a growing chain intermediate. PMID:18723688

The role of the distal elongation zone in the response of maize roots to auxin and gravity

NASA Technical Reports Server (NTRS)

Ishikawa, H.; Evans, M. L.

1993-01-01

We used a video digitizer system to (a) measure changes in the pattern of longitudinal surface extension in primary roots of maize (Zea mays L.) upon application and withdrawal of auxin and (b) compare these patterns during gravitropism in control roots and roots pretreated with auxin. Special attention was paid to the distal elongation zone (DEZ), arbitrarily defined as the region between the meristem and the point within the elongation zone at which the rate of elongation reaches 0.3 of the peak rate. For roots in aqueous solution, the basal limit of the DEZ is about 2.5 mm behind the tip of the root cap. Auxin suppressed elongation throughout the elongation zone, but, after 1 to 3 h, elongation resumed, primarily as a result of induction of rapid elongation in the DEZ. Withdrawal of auxin during the period of strong inhibition resulted in exceptionally rapid elongation attributable to the initiation of rapid elongation in the DEZ plus recovery in the main elongation zone. Gravistimulation of auxin-inhibited roots induced rapid elongation in the DEZ along the top of the root. This resulted in rapid gravitropism even though the elongation rate of the root was zero before gravistimulation. The results indicate that cells of the DEZ differ from cells in the bulk of the elongation zone with respect to auxin sensitivity and that DEZ cells play an important role in gravitropism.

Spacecraft Docking System

NASA Technical Reports Server (NTRS)

Ghofranian, Siamak (Inventor); Chuang, Li-Ping Christopher (Inventor); Motaghedi, Pejmun (Inventor)

2016-01-01

A method and apparatus for docking a spacecraft. The apparatus comprises elongate members, movement systems, and force management systems. The elongate members are associated with a docking structure for a spacecraft. The movement systems are configured to move the elongate members axially such that the docking structure for the spacecraft moves. Each of the elongate members is configured to move independently. The force management systems connect the movement systems to the elongate members and are configured to limit a force applied by the each of the elongate members to a desired threshold during movement of the elongate members.

Transition zone cells reach G2 phase before initiating elongation in maize root apex

PubMed Central

Alarcón, M. Victoria

2017-01-01

ABSTRACT Root elongation requires cell divisions in the meristematic zone and cell elongation in the elongation zone. The boundary between dividing and elongating cells is called the transition zone. In the meristem zone, initial cells are continuously dividing, but on the basal side of the meristem cells exit the meristem through the transition zone and enter in the elongation zone, where they stop division and rapidly elongate. Throughout this journey cells are accompanied by changes in cell cycle progression. Flow cytometry analysis showed that meristematic cells are in cycle, but exit when they enter the elongation zone. In addition, the percentage of cells in G2 phase (4C) strongly increased from the meristem to the elongation zone. However, we did not observe remarkable changes in the percentage of cells in cell cycle phases along the entire elongation zone. These results suggest that meristematic cells in maize root apex stop the cell cycle in G2 phase after leaving the meristem. PMID:28495964

Evaluation of the Course of the Flight Simulators from the Perspective of Students and University Teachers

ERIC Educational Resources Information Center

Kaysi, Feyzi; Bavli, Bünyamin; Gürol, Aysun

2016-01-01

The study evaluates the flight simulators course which was opened to fulfill the intermediate staff need of the sector. To collect data, Qualitative techniques were applied. Within this scope, the case study method was employed in the study. The study group consisted of students and instructors. In-depth and focus group interviews were conducted…

Cash Flow Statement Spreadsheet Modeling Case Using a Prototype System Development Process

ERIC Educational Resources Information Center

Davis, Jefferson T.

2015-01-01

U.S. GAAP and IFRS standards both require a cash flow statement that presents operating, investing and financing net cash flows (FASB, FAS 95; 1987; IASB, IAS 7, 1992). Although students are exposed to the cash flow statement in beginning accounting courses and then study the cash flow statement in more depth in intermediate accounting classes,…

Biomechanics and energetics in aquatic and semiaquatic mammals: platypus to whale.

PubMed

Fish, F E

2000-01-01

A variety of mammalian lineages have secondarily invaded the water. To locomote and thermoregulate in the aqueous medium, mammals developed a range of morphological, physiological, and behavioral adaptations. A distinct difference in the suite of adaptations, which affects energetics, is apparent between semiaquatic and fully aquatic mammals. Semiaquatic mammals swim by paddling, which is inefficient compared to the use of oscillating hydrofoils of aquatic mammals. Semiaquatic mammals swim at the water surface and experience a greater resistive force augmented by wave drag than submerged aquatic mammals. A dense, nonwettable fur insulates semiaquatic mammals, whereas aquatic mammals use a layer of blubber. The fur, while providing insulation and positive buoyancy, incurs a high energy demand for maintenance and limits diving depth. Blubber contours the body to reduce drag, is an energy reserve, and suffers no loss in buoyancy with depth. Despite the high energetic costs of a semiaquatic existence, these animals represent modern analogs of evolutionary intermediates between ancestral terrestrial mammals and their fully aquatic descendants. It is these intermediate animals that indicate which potential selection factors and mechanical constraints may have directed the evolution of more derived aquatic forms.

Depth of maximum of air-shower profiles at the Pierre Auger Observatory. II. Composition implications

DOE PAGES

Aab, A.; Abreu, P.; Aglietta, M.; ...

2014-12-01

Using the data taken at the Pierre Auger Observatory between December 2004 and December 2012, we have examined the implications of the distributions of depths of atmospheric shower maximum (Xmax), using a hybrid technique, for composition and hadronic interaction models. We do this by fitting the distributions with predictions from a variety of hadronic interaction models for variations in the composition of the primary cosmic rays and examining the quality of the fit. Regardless of what interaction model is assumed, we find that our data are not well described by a mix of protons and iron nuclei over most ofmore » the energy range. Acceptable fits can be obtained when intermediate masses are included, and when this is done consistent results for the proton and iron-nuclei contributions can be found using the available models. We observe a strong energy dependence of the resulting proton fractions, and find no support from any of the models for a significant contribution from iron nuclei. However, we also observe a significant disagreement between the models with respect to the relative contributions of the intermediate components.« less

Globigerinoides ruber morphotypes in the Gulf of Mexico: a test of null hypothesis

USGS Publications Warehouse

Thirumalai, Kaustubh; Richey, Julie N.; Quinn, Terrence M.; Poore, Richard Z.

2014-01-01

Planktic foraminifer Globigerinoides ruber (G. ruber), due to its abundance and ubiquity in the tropical/subtropical mixed layer, has been the workhorse of paleoceanographic studies investigating past sea-surface conditions on a range of timescales. Recent geochemical work on the two principal white G. ruber (W) morphotypes, sensu stricto (ss) and sensu lato (sl), has hypothesized differences in seasonal preferences or calcification depths, implying that reconstructions using a non-selective mixture of morphotypes could potentially be biased. Here, we test these hypotheses by performing stable isotope and abundance measurements on the two morphotypes in sediment trap, core-top, and downcore samples from the northern Gulf of Mexico. As a test of null hypothesis, we perform the same analyses on couplets of G. ruber (W) specimens with attributes intermediate to the holotypic ss and sl morphologies. We find no systematic or significant offsets in coeval ss-sl δ18O, and δ13C. These offsets are no larger than those in the intermediate pairs. Coupling our results with foraminiferal statistical model INFAUNAL, we find that contrary to previous work elsewhere, there is no evidence for discrepancies in ss-sl calcifying depth habitat or seasonality in the Gulf of Mexico.

Faulting of natural serpentinite: Implications for intermediate-depth seismicity

NASA Astrophysics Data System (ADS)

Gasc, Julien; Hilairet, Nadège; Yu, Tony; Ferrand, Thomas; Schubnel, Alexandre; Wang, Yanbin

2017-09-01

The seismic potential of serpentinites at high pressure was investigated via deformation experiments on cored natural serpentinite samples, during which micro-seismicity was monitored by recording Acoustic Emissions (AEs). Deformation was performed at pressures of 3-5 GPa, using a Deformation-DIA device, and over a wide range of temperatures, both within and outside antigorite's stability field. Below 400 °C, serpentinite deformation involves ;silent; semi-brittle mechanisms, even in cases where strain localization is observed. At high temperature (i.e., above 600 °C), despite conditions propitious to dehydration embrittlement (i.e., fast strain rates and reaction kinetics), joint deformation and dehydration lead to ductile shear, without generation of AEs. Brittle behavior was observed in a narrow temperature window ca. 500 °C. In this latter case, AEs are consistently observed upon faulting and extremely sharp strain localization is observed in recovered samples. The resulting microstructures are consistent with the inverse ductile-to-brittle transition proposed by Proctor and Hirth (2016) in antigorite. This may therefore be a source of seismicity in subducting slabs at mantle pressures and temperatures from 500 to 600 °C. However, the acoustic signal observed here is orders of magnitude weaker than what is obtained at low PT conditions with brittle failure, consistently with low radiation efficiency of serpentinite faulting (Prieto et al., 2013) and suggests that other mechanisms are responsible for large intermediate-depth earthquakes. In fact, the present results are in line with a recent study (Ferrand et al., 2017), that suggests that intermediate earthquakes are likely induced by mechanical instabilities due to dehydration in partly hydrated peridotites.

The relationship of birth weight, gestational age, and postmenstrual age with ocular biometry parameters in premature infants.

PubMed

Ozdemir, Ozdemir; Tunay, Zuhal Ozen; Acar, Damla Erginturk; Erol, Muhammet Kazım; Sener, Ender; Acar, Ugur

2015-01-01

To analyze ocular biometry parameters and evaluate their relationship with gestational age, birth weight, and postmenstrual age in prematurely born infants. The right eyes of 361 premature infants born before the 36th gestational week were evaluated. Birth weight, gestational week, and gender were recorded. An A-scan Biometer was used for obtaining axial measurements, including anterior chamber depth, lens thickness, vitreous length, and total axial length. Gestational age and birth weight values ranged from 23 to 36 weeks and from 560 to 2,670 g, respectively. The mean gestational age and birth weight were 30.8 ± 2.8 weeks and 1,497.9 ± 483.6 g, respectively. During the first examination (4-5 weeks of postnatal age), birth weight and gestational age of the infants correlated significantly and positively with lens thickness, vitreous length, and axial length (r>0.5, p<0.001), but not with anterior chamber depth (r<0.5). Increased vitreous and axial lengths correlated significantly with increasing postmenstrual age of the infants (r=0.669, p<0.001; r=0.845, p<0.001, respectively). Lens thickness, vitreous length, and axial length, but not anterior chamber depth, were significantly correlated with birth weight and gestational age. All four parameters increased with increasing postmenstrual age, with higher correlations for vitreous and axial lengths than for anterior chamber depth and lens thickness. It was concluded that axial elongation resulted primarily from increasing posterior chamber length.

Diphytanyl glycerol ether distributions in sediments of the Orca Basin

DOE Office of Scientific and Technical Information (OSTI.GOV)

Pease, T.K.; VanVleet, E.S.; Barre, J.S.

1992-09-01

Archaebacterially produced diphytanyl glycerol ether (DPGE) was examined in core sediments from the Orca Basin, an anoxic hypersaline basin in the northwestern Gulf of Mexico, to observe its spatial variability and potential origin. A differential extraction protocol was employed to quantify the isopranyl glycerol ethers associated with unbound, intermediate-bound, and kerogen-bound lipid fractions. Archaebacterial lipids were evident at all depths for the unbound and intermediate-bound fractions. Concentrations of DPGE ranged from 0.51 to 2.91 [mu]g/g dry sediment at the surface and showed secondary maxima deeper in basin sediments. Intermediate-bound DPGE concentrations exhibited an inverse relationship to unbound DPGE concentrations. Kerogen-boundmore » DPGE concentrations were normally below detection limits. Earlier studies describing the general homogeneity of lipid components within the overlying brine and at the brine/seawater interface suggest that the large-scale sedimentary DPGE variations observed in this study result from spatial and temporal variations in in-situ production by methanogenic or extremely halophilic archaebacteria.« less

Spreading of Levantine Intermediate Waters by submesoscale coherent vortices in the northwestern Mediterranean Sea as observed with gliders

NASA Astrophysics Data System (ADS)

Bosse, Anthony; Testor, Pierre; Mortier, Laurent; Prieur, Louis; Taillandier, Vincent; d'Ortenzio, Fabrizio; Coppola, Laurent

2015-03-01

Since 2007, gliders have been regularly deployed in the northwestern Mediterranean Sea, a crucial region regarding the thermohaline circulation of the Mediterranean Sea. It revealed for the first time very warm (+0.4∘C) and saline (+0.1) submesoscale anticyclones at intermediate depth characterized by a small radius (˜5 km), high Rossby (˜0.3), and Burger (˜0.7) numbers. They are likely order of 10 to be formed each year, have a life time order a year and certainly contribute significantly to the spreading of the Levantine Intermediate Waters (LIW) toward the whole subbasin, thus potentially impacting wintertime vertical mixing through hydrographical and dynamical preconditioning. They could be mainly formed by the combined action of turbulent mixing and flow detachment of the northward flow of LIW at the northwestern headland of Sardinia. Upwelling conditions along the western coast of Sardinia associated with a southward geostrophic flow within the upper layers seem to play a key role in their formation process.

Nuclear pore assembly proceeds by an inside-out extrusion of the nuclear envelope

PubMed Central

Otsuka, Shotaro; Bui, Khanh Huy; Schorb, Martin; Hossain, M Julius; Politi, Antonio Z; Koch, Birgit; Eltsov, Mikhail; Beck, Martin; Ellenberg, Jan

2016-01-01

The nuclear pore complex (NPC) mediates nucleocytoplasmic transport through the nuclear envelope. How the NPC assembles into this double membrane boundary has remained enigmatic. Here, we captured temporally staged assembly intermediates by correlating live cell imaging with high-resolution electron tomography and super-resolution microscopy. Intermediates were dome-shaped evaginations of the inner nuclear membrane (INM), that grew in diameter and depth until they fused with the flat outer nuclear membrane. Live and super-resolved fluorescence microscopy revealed the molecular maturation of the intermediates, which initially contained the nuclear and cytoplasmic ring component Nup107, and only later the cytoplasmic filament component Nup358. EM particle averaging showed that the evagination base was surrounded by an 8-fold rotationally symmetric ring structure from the beginning and that a growing mushroom-shaped density was continuously associated with the deforming membrane. Quantitative structural analysis revealed that interphase NPC assembly proceeds by an asymmetric inside-out extrusion of the INM. DOI: http://dx.doi.org/10.7554/eLife.19071.001 PMID:27630123

Applications of just-noticeable depth difference model in joint multiview video plus depth coding

NASA Astrophysics Data System (ADS)

Liu, Chao; An, Ping; Zuo, Yifan; Zhang, Zhaoyang

2014-10-01

A new multiview just-noticeable-depth-difference(MJNDD) Model is presented and applied to compress the joint multiview video plus depth. Many video coding algorithms remove spatial and temporal redundancies and statistical redundancies but they are not capable of removing the perceptual redundancies. Since the final receptor of video is the human eyes, we can remove the perception redundancy to gain higher compression efficiency according to the properties of human visual system (HVS). Traditional just-noticeable-distortion (JND) model in pixel domain contains luminance contrast and spatial-temporal masking effects, which describes the perception redundancy quantitatively. Whereas HVS is very sensitive to depth information, a new multiview-just-noticeable-depth-difference(MJNDD) model is proposed by combining traditional JND model with just-noticeable-depth-difference (JNDD) model. The texture video is divided into background and foreground areas using depth information. Then different JND threshold values are assigned to these two parts. Later the MJNDD model is utilized to encode the texture video on JMVC. When encoding the depth video, JNDD model is applied to remove the block artifacts and protect the edges. Then we use VSRS3.5 (View Synthesis Reference Software) to generate the intermediate views. Experimental results show that our model can endure more noise and the compression efficiency is improved by 25.29 percent at average and by 54.06 percent at most compared to JMVC while maintaining the subject quality. Hence it can gain high compress ratio and low bit rate.

Double diameter boring tool

DOE Office of Scientific and Technical Information (OSTI.GOV)

Ashbaugh, F.N.; Murry, K.R.

A method of boring two concentric holes of different depths is described utilizing an elongated boring tool having a tool axis of rotation, a longitudinally disposed tool centerline axis, and first and second transverse cutting edges at one end thereof extending across the boring tool, the second cutting edge being longitudinally rearwardly recessed with respect to the first cutting edge. The method consists of inserting the boring tool into an adjustable boring head, adjusting a distance B between the tool centerline axis and the tool axis of rotation such that the tool axis of rotation intersects a first boring areamore » of the first cutting edge; and boring the concentric holes having respectively larger and smaller diameters.« less

Seamount Lineaments of the Northern Galápagos and Plume-ridge Interaction

NASA Astrophysics Data System (ADS)

Cushman, W.; Harpp, K. S.; Kurz, M. D.; Geist, D.; Mittelstaedt, E. L.; Fornari, D. J.; Soule, S.; R/v Melville Mv1007 Flamingo Scientific Team

2010-12-01

The Northern Galápagos Province (NGP) is located between the Galápagos Archipelago and the Galápagos Spreading Center (GSC). There are 3 volcanic lineaments in the NGP, trending NW/SE. The lineaments’ origins remain enigmatic, but may provide information about plume-ridge interaction. In 2010, the R/V Melville MV1007 Cruise employed EM122 multibeam bathymetry, MR1 sidescan sonar, and dredging to study the area. The western lineament, the Wolf-Darwin Lineament (WDL), intersects the GSC at ~92°10’W and is the largest of the 3. The WDL is ~190km long and has 6 main volcanic centers, with many smaller satellite vents. The Central Lineament (CL) intersects the GSC at ~91°48’W and is ~60 km long with 4 major seamounts. The largest is roughly 2/3 the volume of the WDL’s smallest seamount. The Eastern Lineament (EL) intersects the GSC at ~91°16’W and is ~100km long. The EL includes 5 major seamounts with intermediate volumes. From N to S, the edifices in the WDL and the EL become more elongate, suggesting greater deviatoric stresses away from the ridge. The elongation is more pronounced in WDL seamounts than on those in the EL. The bathymetric footprints of seamounts on the N end of both lineaments are more symmetrical, as are all those of the CL. Seamounts with circular bases are probably monogenetic, with limited ranges of Mg#, phenocryst content, and incompatible trace element (ITE) concentrations. Most have single vents. The larger elongate seamounts have multiple vents and wider compositional ranges, likely the result of polygenetic eruptive histories. Lavas erupted along the lineaments have ITE ratios ranging between Galápagos Plume and depleted upper mantle sources, suggesting that mixing between the 2 sources occurs in the NGP. No seamount is more enriched than GSC axial lavas from within the study area, and no systematic gradient exists along strike of any of the lineaments, indicating that mixing between the plume and ridge is not simply progressive. The CL is the least plume-like, with the EL generally exhibiting more and the WDL the most plume contributions. The 3He/4He ratios along the lineaments are MORB-like, with a slight increase S along the WDL and EL. The Sm/Yb for WDL lavas increase southward, which may reflect increasing depth of melt generation in response to thickening lithosphere away from the GSC. The increase is more pronounced S of a pseudofault that intersects the WDL. Morgan (1978) proposed that the WDL is a channel along which plume material reaches the GSC; more recent models have been proposed for the lineaments in which plume material is transported to the GSC via ‘fingers’ that act as conduits. Data from the lineaments are inconsistent with both hypotheses, which predict increasing plume influence with distance from the GSC. An alternative hypothesis invokes stresses induced on the NGP by the GSC transform fault at ~90°50’W. These stresses create weak zones in the lithosphere along which plume-contaminated mantle is erupted to form lineaments. This hypothesis predicts no channeling of plume material to the GSC, but rather that the lineaments are the result of dispersed, point source eruptions tapping the heterogeneous mantle.

The combined use of 87Sr/86Sr and carbon and water isotopes to study the hydrochemical interaction between groundwater and lakewater in mantled karst

NASA Astrophysics Data System (ADS)

Katz, Brian G.; Bullen, Thomas D.

1996-12-01

The hydrochemical interaction between groundwater and lakewater influences the composition of water that percolates downward from the surficial aquifer system through the underlying intermediate confining unit and recharges the Upper Floridan aquifer along highlands in Florida. The 87Sr/86Sr ratio along with the stable isotopes, D, 18O, and 13C were used as tracers to study the interaction between groundwater, lakewater, and aquifer minerals near Lake Barco, a seepage lake in the mantled karst terrane of northern Florida. Upgradient from the lake, the 87Sr/86Sr ratio of groundwater decreases with depth (mean values of 0.71004, 0.70890, and 0.70852 for water from the surficial aquifer system, intermediate confining unit, and Upper Floridan aquifer, respectively), resulting from the interaction of dilute oxygenated recharge water with aquifer minerals that are less radiogenic with depth. The concentrations of Sr2+ generally increase with depth, and higher concentrations of Sr2+ in water from the Upper Floridan aquifer (20-35 μg/L), relative to water from the surficial aquifer system and the intermediate confining unit, result from the dissolution of Sr-bearing calcite and dolomite in the Eocene limestone. Dissolution of calcite [δ13C= -1.6permil(‰)] is also indicated by an enriched δ13CDIC(-8.8 to -11.4 ‰) in water from the Upper Floridan aquifer, relative to the overlying hydrogeologic units (δ13CDIC< -16‰). Groundwater downgradient from Lake Barco was enriched in18O and D relative to groundwater upgradient from the lake, indicating mixing of lakewater leakage and groundwater. Downgradient from the lake, the 87Sr/86Sr ratio of groundwater and aquifer material become less radiogenic and the Sr2+ concentrations generally increase with depth. However, Sr2+ concentrations are substantially less than in upgradient groundwaters at similar depths. The lower Sr2+ concentrations result from the influence of anoxic lakewater leakage on the mobility of Sr2+ from clays. Based on results from mass-balance modeling, it is probable that cation exchange plays the dominant role in controlling the 87Sr/86Sr ratio of groundwater, both upgradient and downgradient from Lake Barco. Even though groundwater from the three distinct hydrogeologic units displays considerable variability in Sr concentration and isotopic composition, the dominant processes associated with the mixing of lakewater leakage with groundwater, as well as the effects of mineral-water interaction, can be ascertained by integrating the use of stable and radiogenic isotopic measurements of groundwater, lakewater, and aquifer minerals.

Intermediate type excitons in Schottky barriers of A3B6 layer semiconductors and UV photodetectors

NASA Astrophysics Data System (ADS)

Alekperov, O. Z.; Guseinov, N. M.; Nadjafov, A. I.

2006-09-01

Photoelectric and photovoltaic spectra of Schottky barrier (SB) structures of InSe, GaSe and GaS layered semiconductors (LS) are investigated at quantum energies from the band edge excitons of corresponding materials up to 6.5eV. Spectral dependences of photoconductivity (PC) of photo resistors and barrier structures are strongly different at the quantum energies corresponding to the intermediate type excitons (ITE) observed in these semiconductors. It was suggested that high UV photoconductivity of A3B6 LS is due to existence of high mobility light carriers in the depth of the band structure. It is shown that SB of semitransparent Au-InSe is high sensitive photo detector in UV region of spectra.

Gibberellin biosynthesis and signal transduction is essential for internode elongation in deepwater rice.

PubMed

Ayano, Madoka; Kani, Takahiro; Kojima, Mikiko; Sakakibara, Hitoshi; Kitaoka, Takuya; Kuroha, Takeshi; Angeles-Shim, Rosalyn B; Kitano, Hidemi; Nagai, Keisuke; Ashikari, Motoyuki

2014-10-01

Under flooded conditions, the leaves and internodes of deepwater rice can elongate above the water surface to capture oxygen and prevent drowning. Our previous studies showed that three major quantitative trait loci (QTL) regulate deepwater-dependent internode elongation in deepwater rice. In this study, we investigated the age-dependent internode elongation in deepwater rice. We also investigated the relationship between deepwater-dependent internode elongation and the phytohormone gibberellin (GA) by physiological and genetic approach using a QTL pyramiding line (NIL-1 + 3 + 12). Deepwater rice did not show internode elongation before the sixth leaf stage under deepwater condition. Additionally, deepwater-dependent internode elongation occurred on the sixth and seventh internodes during the sixth leaf stage. These results indicate that deepwater rice could not start internode elongation until the sixth leaf stage. Ultra-performance liquid chromatography tandem mass-spectrometry (UPLC-MS/MS) method for the phytohormone contents showed a deepwater-dependent GA1 and GA4 accumulation in deepwater rice. Additionally, a GA inhibitor abolished deepwater-dependent internode elongation in deepwater rice. On the contrary, GA feeding mimicked internode elongation under ordinary growth conditions. However, mutations in GA biosynthesis and signal transduction genes blocked deepwater-dependent internode elongation. These data suggested that GA biosynthesis and signal transduction are essential for deepwater-dependent internode elongation in deepwater rice. © 2014 The Authors. Plant, Cell & Environment published by John Wiley & Sons Ltd.

Terrestrial Cosmogenic-Nuclide Dating of Alluvial Fans in Death Valley, California

USGS Publications Warehouse

Machette, Michael N.; Slate, Janet L.; Phillips, Fred M.

2008-01-01

We have used terrestrial cosmogenic nuclides (TCN) to establish the age of some of the most extensive Quaternary alluvial fans in Death Valley, California. These intermediate-age alluvial fans are most extensive on the western side of the valley, where tectonic deformation is considerably less pronounced than on the eastern side of the valley. These fans are characterized by a relatively smooth, densely packed desert pavement formed by well-varnished (blackened) clasts. These surfaces have been mapped as the Q2 gravel by previous workers and as unit Qai (intermediate age) by us. However, the intermediate-age gravels probably contain multiple subunits, as evidenced by slight differences in morphologic expression, soil formation, and inset geomorphic relations. The TCN technique used herein sums the cosmogenic 36Cl in approximately 2.5-meter-deep profiles through soil and host alluvium, thus avoiding some of the problems associated with the more typical surface-exposure dating of boulders or smaller clasts. Our TCN 36Cl dating of 12 depth profiles indicates that these intermediate-age (Qai) alluvial fans range from about 100 to 40 kilo-annum (ka), with a mean age of about 70 ka. An alternative interpretation is that alluvial unit Qai was deposited in two discrete episodes from 90 to 80 ka and from 60 to 50 ka, before and after MIS (marine oxygen-isotope stage) 4 (respectively). Without an intermediate-age unit, such as MIS 4 lake deposits, we can neither disprove nor prove that Qai was deposited in two discrete intervals or over a longer range of time. Thus, in Death Valley, alluvial unit Qai largely brackets MIS 4, which is not associated with a deep phase of Lake Manly. These Qai fans extend to elevations of about -46 meters (150 feet below sea level) and have not been transgressed by Lake Manly, suggesting that MIS 4 or MIS 2 lakes were rather shallow in Death Valley, perhaps because they lacked inflow from surface runoff of the Sierra Nevada drainages through Panamint Valley and over Wingate Wash. A remnant of ancient lake shoreline deposits that once extended across the Hanaupah Canyon fan constrains the timing and extent of the last deep cycle of Pleistocene Lake Manly. The lacustrine delta complex yields a 36Cl depth-profile date of 130 ka, which is consistent with deposition during a highstand of Lake Manly at the end of MIS 6. These deposits are presently at an altitude of about 30 meters above sea level (asl), which relates to a lake with a maximum depth of about 115 meters. Remnants of shoreline deposits at higher elevations on the southern margin of the Hanaupah Canyon fan complex are cut across older alluvium (unit Qao) and may be related to an MIS 6 highstand of at least 67 meters asl or, more likely, an older (MIS 8 or earlier) highstand that is poorly preserved and still undated in the valley. As part of our work on the west-side fans, we also dated an older phase of alluvial-fan deposits from the Trail Canyon fan complex, which is north of Hanaupah Canyon. A 36Cl depth-profile age of 170 ka suggests alluvial deposition of unit Qaio (older phase of Qao) took place prior to the MIS 6 highstand of Lake Manly. Knowing the absolute ages (or range in ages) of the intermediate-age (Qai) surfaces in Death Valley allows us to estimate the following rates of geologic processes: (1) a lateral slip rate of 5 millimeters per year for the northern Death Valley fault zone; (2) uplift of 50 meters in roughly the past 80,000 years for parts of the Mustard Canyon hills in east-central Death Valley; and (3) an estimated 10-40 m of dip-slip thrust movement on the Echo Canyon fault in Furnace Creek Canyon.

The architecture of amyloid-like peptide fibrils revealed by X-ray scattering, diffraction and electron microscopy

DOE Office of Scientific and Technical Information (OSTI.GOV)

Langkilde, Annette E., E-mail: annette.langkilde@sund.ku.dk; Morris, Kyle L.; Serpell, Louise C.

The aggregation process and the fibril state of an amyloidogenic peptide suggest monomer addition to be the prevailing mechanism of elongation and a model of the peptide packing in the fibrils has been obtained. Structural analysis of protein fibrillation is inherently challenging. Given the crucial role of fibrils in amyloid diseases, method advancement is urgently needed. A hybrid modelling approach is presented enabling detailed analysis of a highly ordered and hierarchically organized fibril of the GNNQQNY peptide fragment of a yeast prion protein. Data from small-angle X-ray solution scattering, fibre diffraction and electron microscopy are combined with existing high-resolution X-raymore » crystallographic structures to investigate the fibrillation process and the hierarchical fibril structure of the peptide fragment. The elongation of these fibrils proceeds without the accumulation of any detectable amount of intermediate oligomeric species, as is otherwise reported for, for example, glucagon, insulin and α-synuclein. Ribbons constituted of linearly arranged protofilaments are formed. An additional hierarchical layer is generated via the pairing of ribbons during fibril maturation. Based on the complementary data, a quasi-atomic resolution model of the protofilament peptide arrangement is suggested. The peptide structure appears in a β-sheet arrangement reminiscent of the β-zipper structures evident from high-resolution crystal structures, with specific differences in the relative peptide orientation. The complexity of protein fibrillation and structure emphasizes the need to use multiple complementary methods.« less

Development and evaluation of elastomeric materials for geothermal applications. Annual report, October 1977-December 1978

DOE Office of Scientific and Technical Information (OSTI.GOV)

Mueller, W.A.; Kalfayan, S.H.; Reilly, W.W.

1979-05-15

The research involved formulation of commercially available materials and synthesis of new elastomers. Formulation studies at JPL and elsewhere produced a material having about 250-350 psi tensile strength and 30 to 80% elongation at 260/sup 0/C for at least 24 hours in simulated brine. The relationship between these laboratory test results and sealing performance in actual or simulated test conditions is not entirely clear; however, it is believed that no conventional formation or casing packer design is likely to perform well using these materials. The synthetic effort focused on high temperature block copolymers and development of curable polystyrene. Procedures weremore » worked out for synthesizing these new materials. Initial results with heat-cured unfilled polystyrene gum at 260/sup 0/C indicated a tensile strength of about 50 psi. Cast films of the first sample of polyphenyl quinoxaline-polystyrene block copolymer, which has a graft-block structure consisting of a polystyrene chain with pendant polyphenyl quinoxaline groups, showed elastomeric behavior in the required temperature range. Its tensile strength and elongation at 260/sup 0/C were 220 to 350 psi and 18 to 36%, respectively. All of these materials also showed satisfactory hydrolytic stability. A procedure for the synthesis of a linear block copolymer of this type has been devised, and the required new intermediates have been synthesized and characterized. A description of the previous year's work is included in an appendix.« less

Polyphosphate kinase: demonstration that short chain polyphosphate serves as a primer for the enzymatic synthesis of polyphosphate

DOE Office of Scientific and Technical Information (OSTI.GOV)

Robinson, N.A.; Wood, H.G.

1986-05-01

Polyphosphate (poly(P)) kinase, isolated from Propionibacterium shermanii, catalyzes the following reaction: poly(P/sub n/) + ATPin equilibriumpoly(P/sub n+1/) + ADP. The authors have purified this enzyme to 90% homogeneity and have shown it to be composed of 2-3 identical subunits of M/sub r/ 80,000. Investigation of the reaction mechanism by product analysis has revealed that the elongation phase is processive whereby successive elongation occurs without release of intermediate sizes until very long chains are formed. The initiation phase of synthesis has been investigated using (/sup 32/P) poly(P) primer of chain length 11-60. It is incorporated into long chain poly(P) and themore » /sup 32/P has been shown, by use of poly(P) glucokinase, to be localized at the end of the molecule. Calculation of average chain length based upon the incorporation of /sup 32/P, however, yields a value approx.3 fold higher than the value calculated by another method using poly(P) glucokinase. This result indicates that initiation of poly(P) synthesis occurs by at least one other route which does not involve short chain poly(P) primers. The effect of temperature and concentration of poly(P) primer upon the average chain length of poly(P) synthesized was also investigated. A general trend was observed in which the chain length of the synthesized poly(P) decreased as either temperature or concentration or primer was increased.« less

Structural characterization of ribosome recruitment and translocation by type IV IRES

PubMed Central

Murray, Jason; Savva, Christos G; Shin, Byung-Sik; Dever, Thomas E; Ramakrishnan, V; Fernández, Israel S

2016-01-01

Viral mRNA sequences with a type IV IRES are able to initiate translation without any host initiation factors. Initial recruitment of the small ribosomal subunit as well as two translocation steps before the first peptidyl transfer are essential for the initiation of translation by these mRNAs. Using electron cryomicroscopy (cryo-EM) we have structurally characterized at high resolution how the Cricket Paralysis Virus Internal Ribosomal Entry Site (CrPV-IRES) binds the small ribosomal subunit (40S) and the translocation intermediate stabilized by elongation factor 2 (eEF2). The CrPV-IRES restricts the otherwise flexible 40S head to a conformation compatible with binding the large ribosomal subunit (60S). Once the 60S is recruited, the binary CrPV-IRES/80S complex oscillates between canonical and rotated states (Fernández et al., 2014; Koh et al., 2014), as seen for pre-translocation complexes with tRNAs. Elongation factor eEF2 with a GTP analog stabilizes the ribosome-IRES complex in a rotated state with an extra ~3 degrees of rotation. Key residues in domain IV of eEF2 interact with pseudoknot I (PKI) of the CrPV-IRES stabilizing it in a conformation reminiscent of a hybrid tRNA state. The structure explains how diphthamide, a eukaryotic and archaeal specific post-translational modification of a histidine residue of eEF2, is involved in translocation. DOI: http://dx.doi.org/10.7554/eLife.13567.001 PMID:27159451

Initial investigation of SU-8 photopolymer as a material for noninvasive endothelial cell research platforms

NASA Astrophysics Data System (ADS)

Westwood, S.; Gojova, A.; Kuo, B.; Barakat, A. I.; Gray, B. L.

2007-01-01

This paper presents a preliminary investigation in the usage of the micromachining polymer material SU-8 for the noninvasive shape control and functional study of vascular endothelial cells (ECs). We previously demonstrated a silicon and glass modular microinstrument platform that allowed for a wide range of EC functional response studies. However, we expect SU-8 to provide a more versatile fabrication technology and material for microchannel fabrication and instrumentation, since it is capable of achieving high aspect ratio sensor-compatible structures through simple photopatterning. In this paper, SU-8 microchannels were fabricated on glass slides for straightforward optical observation and biological sampling. Channel widths ranged from 50 to 210 µm, length varied from 100 to 2100 µm, with depth fixed at 100 µm. We plated bovine aortic endothelial cells (BAECs) in the microchannels and used image analysis to determine cellular elongation and orientation. Similar to silicon-on-glass microchannels, the cells become more elongated and oriented along the microchannel axis as the width of the microchannel decreases. Initial results indicate cells plate in the microchannels and on the SU-8 surfaces, whereas in a previous silicon microchannel study, cells plated exclusively on the glass bottom surfaces. This finding has implications for SU-8 as a structural material for microchannel instrumentation.

The Location of the Deepest Point of the Eyeball Determines the Optic Disc Configuration.

PubMed

Kim, Yong Chan; Jung, Younhea; Park, Hae-Young Lopilly; Park, Chan Kee

2017-07-19

Tilted and rotated appearances are hallmarks of the myopic optic disc. As the eyeball grows axially, the posterior pole elongates not only globally but in a localized manner as well. In this process, the optic disc is pulled towards the deepest point of the elongated eyeball, which might result in a change in optic disc configuration. Thus, we hypothesized that analyzing the variation of posterior pole contour can play a major role in understanding optic disc configuration in myopic subjects. By analyzing consecutive images of swept source OCT coronal sections at the posterior pole, the deepest interface between Bruch's membrane and the choroid could be identified as the deepest point of the eyeball (DPE). The location and the properties of the DPE differed significantly between the 125 eyes of non-glaucomatous myopic group and the 40 eyes of non-glaucomatous emmetropic group classified based on 24 mm axial length. The results suggested that the larger disc to DPE angle and the larger disc to DPE depth strongly predicts the optic disc torsion degree and the optic disc tilt. Our findings suggest that identifying the posterior pole profile plays a major role in understanding the optic disc alterations found in myopic subjects.

RNA Polymerase II Elongation Control

PubMed Central

Zhou, Qiang; Li, Tiandao; Price, David H.

2014-01-01

Regulation of the elongation phase of transcription by RNA Polymerase II (Pol II) is utilized extensively to generate the pattern of mRNAs needed to specify cell types and to respond to environmental changes. After Pol II initiates, negative elongation factors cause it to pause in a promoter proximal position. These polymerases are poised to respond to the positive transcription elongation factor, P-TEFb, and then enter productive elongation only under the appropriate set of signals to generate full length properly processed mRNAs. Recent global analyses of Pol II and elongation factors, mechanisms that regulate P-TEFb involving the 7SK snRNP, factors that control both the negative and positive elongation properties of Pol II and the mRNA processing events that are coupled with elongation are discussed. PMID:22404626

Determining the orientation of depth-rotated familiar objects.

PubMed

Niimi, Ryosuke; Yokosawa, Kazuhiko

2008-02-01

How does the human visual system determine the depth-orientation of familiar objects? We examined reaction times and errors in the detection of 15 degrees differences in the depth orientations of two simultaneously presented familiar objects, which were the same objects (Experiment 1) or different objects (Experiment 2). Detection of orientation differences was best for 0 degrees (front) and 180 degrees (back), while 45 degrees and 135 degrees yielded poorer results, and 90 degrees (side) showed intermediate results, suggesting that the visual system is tuned for front, side and back orientations. We further found that those advantages are due to orientation-specific features such as horizontal linear contours and symmetry, since the 90 degrees advantage was absent for objects with curvilinear contours, and asymmetric object diminished the 0 degrees and 180 degrees advantages. We conclude that the efficiency of visually determining object orientation is highly orientation-dependent, and object orientation may be perceived in favor of front-back axes.

Paleoproductivity and intermediate-water ventilation in the subarctic Northwest Pacific during the last deglaciation

NASA Astrophysics Data System (ADS)

Khim, B.; Ikehara, K.; Sagawa, T.; Shibahara, A.; Yamamoto, M.

2010-12-01

Laminated sediments during the last deglaciation in the subarctic North Pacific indicate significant depletion of dissolved oxygen concentration at intermediate water depths. Such a strong oxygen minimum zone results primarily from a combination of high surface water productivity and poor ventilation of intermediate waters. We investigated a variety of paleoclimatic proxies using about 8-m long piston core sediment (GH02-1030; 42o13.770N, 144o12.530E; water depth, 1212 m) obtained from the continental slope off Tokachi (eastern Hokkaido Island), which is the main path of the southwestward Oyashio Current in the subarctic Northwest Pacific. Laminated sediments were identified at the two horizons in the core GH02-1030; the upper one at 11.4-12.2 cal.kyr BP and the lower one at 14.1-14.7 cal.kyr BP, corresponding to Bølling-Allerød (B/A) and Preboreal (PB), respectively. Between these laminated layers, Younger Dryas occurred. Both laminated sediment layers are characterized by Bolivina tumida, B. pacifica, and Buliminella tenuata, indicating dysoxic bottom water conditions. Increased Mg/Ca-derived intermediate-water temperature and δ18OW values at B/A and PB periods suggest the poor ventilation of intermediate water because of the surface water freshening (i.e., decrease of surface-water salinity). UK'37-derived temperature record also supports the increase of surface-water temperature during B/A and PB intervals. During the last deglaciation, short-chain C14-C18 n-fatty acids, derived mainly from marine organisms, showed higher concentrations, indicating the increased surface-water production, and at the same time, abundant lignin reflected more contribution of terrigenous organic matter, supporting increased freshwater discharge. Variation of CaCO3 contents show remarkable double peaks, corresponding to B/A and PB periods, respectively, leading to the increase of TOC contents. Opal contents also follow similar pattern to CaCO3 contents, but are much less than the Holocene values. Interesting are the remarkable double peaks of δ15N values, also corresponding to B/A and PB intervals, respectively. Such increased δ15N values indicated the enhanced nitrate utilization through the promoted phytoplankton production. Otherwise, the high δ15N records could be indicative of water column denitrification in the source region. Thus, our study area possibly experienced high surface water productivity at times of reduced intermediate ventilation in the subarctic Northwest Pacific during the last deglaciation.

Washington Geothermal Play Fairway Analysis Heat, Permeability, and Fracture Model Data

DOE Data Explorer

Steely, Alex; Forson, Corina; Cladouhos, Trenton; Swyer, Mike; Davatzes, Nicholas; Anderson, Megan; Ritzinger, Brent; Glen, Jonathan; Peacock, Jared; Schermerhorn, William

2017-12-07

This submission contains raster and vector data for the entire state of Washington, with specific emphasis on the three geothermal play fairway sites: Mount St. Helens seismic zone (MSHSZ), Wind River valley (WRV), and Mount Baker (MB). Data are provided for 3 major geothermal models: heat, permeability, and fluid-filled fractures, and an additional infrastructure model. Both of the permeability and fluid-filled-fracture models are produced at 200 m and at 2 km depths; the heat model is only produced at the 200 m depth. Values are provided for both model favorability and model confidence. A combined model at 200m and 2 km depths is provided for favorability, confidence, and exploration risk. Raster data are provided in GeoTiff format and have a statewide coverage. Cell size is 104.355 ft; file type is unsigned 8-bit integer (0-255); 0 represents no favorability or confidence; 255 represents maximum favorability or confidence. The NAD83(HARN)/Washington South (ftUS) projection is used (EPSG:2927). Vector data are provided in shapefile or comma-delimited text file formats. Geographic coordinates, where provided, are in WGS84. A readme file accompanies each folder and provides an overview and description of the enclosed data. The heat model combines 5 intermediate raster layers (which are included in the download package): temperature gradient wells, young volcanic vents, hot springs, young intrusive volcanic rocks, and geothermometry. The permeability model combines 8 intermediate raster layers: density of mapped faults, 2D dilation tendency of mapped faults, 2D slip tendency of mapped faults, seismicity, 3D dilation tendency, 3D slip tendency, 3D maximum coulomb shear stress, and 3D slip gradients. The fluid-filled fracture model combines up to 4 intermediate rasters: resistivity from magneto-telluric 3D inversions, seismicity, Vp/Vs anomalies from passive seismic tomography, and Vs anomalies from ambient-noise tomography. A statewide infrastructure model is also provided that formalizes land-use constraints and restrictions relevant for geothermal prospecting and development. This model combines 10 intermediate rasters: areas off limits to drilling, existing or proposed geothermal leases, DNR-owned land, land-use restrictions along the Columbia River Gorge, areas inundated by water, availability of potential process water, proximity to existing roads, proximity to transmission lines, distance from urban areas, and snow-related elevation restrictions. Supporting vector data for the development of each raster layer is provided. For details on the areas of interest and modeling process please see the 'WA_State_Play_Fairway_Phase_2_Technical_Report' in the download package.

Dynamics of Productivity-Related Oxygen Minimum Zone along the Shirshov Ridge, Western Bering Sea, during the Last Glacial Termination

NASA Astrophysics Data System (ADS)

Ovsepyan, E.; Ivanova, E. V.; Tiedemann, R.

2017-12-01

Seasonally sea-ice covered Bering Sea is known to be a sensitive region to study rapid climatic oscillations. Based on benthic (BF) and planktic (PF) foraminiferal data from two sediment cores SO201-2-85KL (85KL, w.d. 968 m) and SO201-2-77KL (77KL, w.d. 2163 m) we reconstruct variations in intensity of oxygen minimum zone (OMZ) and its relation to sea-surface bioproductivity in the central and southern parts of the Shirshov Ridge, western Bering Sea, during the Termination I. A prevalence of suboxic BF group (Kaiho, 1994) in both cores mirrors moderately oxygenated intermediate and deep waters during LGM-Heinrich I interval. Rapid increase in percentages of dysoxic group is registered in the core 77KL at the onset of Bølling/Allerød. This implies that relatively low-oxygen conditions developed at 2 km water depths in the southwestern Bering Sea, but occurrence (20-30%) of suboxic group suggests that oxygen depletion was not dramatic. Simultaneous spikes of high-productivity species point to a bioproductivity rise above the southern part of the ridge. Increase in bioproductivity and decrease in oxygen content are detected 0.9 kyr later above the central part of Shirshov Ridge than above the southern one. This delay might reflect a gradual sea ice retreat from station 77 KL to 85KL during the global warming and sea level rise. Moderate bottom-water oxygenation is suggested for the intermediate depths of 1 km whereas no changes in relative oxygen content are found at 2 km below sea level during the Younger Dryas. Concurrent decrease in bioproductivity is reconstructed from BF records from the core 85KL. However, presence of high-productivity species and elevated BF accumulation rates in the core 77KL point to higher organic matter flux to the sea floor in the southern part of the ridge at the end of Younger Dryas. For the Early Holocene, bioproductivity rise and oxygen depletion in the intermediate waters are inferred from BF data. Strong dominance of dysoxic group in the 85KL indicates that oxygen content at the intermediate depths was much lower during the Early Holocene than during the Bølling/Allerød. The results provide evidence for complex development of OMZ in the western Bering Sea during the Termination I. They also demonstrate high potential to extend such studies to the North Pacific realm.

Changes in North Atlantic deep-sea temperature during climatic fluctuations of the last 25,000 years based on ostracode Mg/Ca ratios

USGS Publications Warehouse

Dwyer, Gary S.; Cronin, Thomas M.; Baker, Paul A.; Rodriguez-Lazaro, Julio

2000-01-01

We reconstructed three time series of last glacial-to-present deep-sea temperature from deep and intermediate water sediment cores from the western North Atlantic using Mg/Ca ratios of benthic ostracode shells. Although the Mg/Ca data show considerable variability (“scatter”) that is common to single-shell chemical analyses, comparisons between cores, between core top shells and modern bottom water temperatures (BWT), and comparison to other paleo-BWT proxies, among other factors, suggest that multiple-shell average Mg/Ca ratios provide reliable estimates of BWT history at these sites. The BWT records show not only glacial-to-interglacial variations but also indicate BWT changes during the deglacial and within the Holocene interglacial stage. At the deeper sites (4500- and 3400-m water depth), BWT decreased during the last glacial maximum (LGM), the late Holocene, and possibly during the Younger Dryas. Maximum deep-sea warming occurred during the latest deglacial and early Holocene, when BWT exceeded modern values by as much as 2.5°C. This warming was apparently most intense around 3000 m, the depth of the modern-day core of North Atlantic deep water (NADW). The BWT variations at the deeper water sites are consistent with changes in thermohaline circulation: warmer BWT signifies enhanced NADW influence relative to Antarctic bottom water (AABW). Thus maximum NADW production and associated heat flux likely occurred during the early Holocene and decreased abruptly around 6500 years B.P., a finding that is largely consistent with paleonutrient studies in the deep North Atlantic. BWT changes in intermediate waters (1000-m water depth) of the subtropical gyre roughly parallel the deep BWT variations including dramatic mid-Holocene cooling of around 4°C. Joint consideration of the Mg/Ca-based BWT estimates and benthic oxygen isotopes suggests that the cooling was accompanied by a decrease in salinity at this site. Subsequently, intermediate waters warmed to modern values that match those of the early Holocene maximum of ∼7°C. Intermediate water BWT changes must also be driven by changes in ocean circulation. These results thus provide independent evidence that supports the hypothesis that deep-ocean circulation is closely linked to climate change over a range of timescales regardless of the mean climate state. More generally, the results further demonstrate the potential of benthic Mg/Ca ratios as a tool for reconstructing past ocean and climate conditions.

What Role Does "Elongation" Play in "Tool-Specific" Activation and Connectivity in the Dorsal and Ventral Visual Streams?

PubMed

Chen, Juan; Snow, Jacqueline C; Culham, Jody C; Goodale, Melvyn A

2018-04-01

Images of tools induce stronger activation than images of nontools in a left-lateralized network that includes ventral-stream areas implicated in tool identification and dorsal-stream areas implicated in tool manipulation. Importantly, however, graspable tools tend to be elongated rather than stubby, and so the tool-selective responses in some of these areas may, to some extent, reflect sensitivity to elongation rather than "toolness" per se. Using functional magnetic resonance imaging, we investigated the role of elongation in driving tool-specific activation in the 2 streams and their interconnections. We showed that in some "tool-selective" areas, the coding of toolness and elongation coexisted, but in others, elongation and toolness were coded independently. Psychophysiological interaction analysis revealed that toolness, but not elongation, had a strong modulation of the connectivity between the ventral and dorsal streams. Dynamic causal modeling revealed that viewing tools (either elongated or stubby) increased the connectivity from the ventral- to the dorsal-stream tool-selective areas, but only viewing elongated tools increased the reciprocal connectivity between these areas. Overall, these data disentangle how toolness and elongation affect the activation and connectivity of the tool network and help to resolve recent controversies regarding the relative contribution of "toolness" versus elongation in driving dorsal-stream "tool-selective" areas.

Experimental and Theoretical Investigations of Phonation Threshold Pressure as a Function of Vocal Fold Elongation

PubMed Central

Tao, Chao; Regner, Michael F.; Zhang, Yu; Jiang, Jack J.

2014-01-01

Summary The relationship between the vocal fold elongation and the phonation threshold pressure (PTP) was experimentally and theoretically investigated. The PTP values of seventeen excised canine larynges with 0% to 15% bilateral vocal fold elongations in 5% elongation steps were measured using an excised larynx phonation system. It was found that twelve larynges exhibited a monotonic relationship between PTP and elongation; in these larynges, the 0% elongation condition had the lowest PTP. Five larynges exhibited a PTP minimum at 5% elongation. To provide a theoretical explanation of these phenomena, a two-mass model was modified to simulate vibration of the elongated vocal folds. Two pairs of longitudinal springs were used to represent the longitudinal elastin in the vocal folds. This model showed that when the vocal folds were elongated, the increased longitudinal tension would increase the PTP value and the increased vocal fold length would decrease the PTP value. The antagonistic effects contributed by these two factors were found to be able to cause either a monotonic or a non-monotonic relationship between PTP and elongation, which were consistent with experimental observations. Because PTP describes the ease of phonation, this study suggests that there may exist a nonzero optimal vocal fold elongation for the greatest ease for phonation in some larynges. PMID:25530744

Effect of equal-channel angular pressing and aging on the microstructure and mechanical properties of an Al-Cu-Mg-Si alloy

NASA Astrophysics Data System (ADS)

Gazizov, M. R.; Dubina, A. V.; Zhemchuzhnikova, D. A.; Kaibyshev, R. O.

2015-07-01

The effect of intermediate equal-channel angular pressing (ECAP) and final aging at 170°C on the mechanical properties and microstructure of aluminum alloy belonging to Al-Cu-Mg-Si system stress with a Cu/Mg ratio (AA2014) is considered. After quenching and aging (treatment T6), the yield stress (σ0.2) and ultimate tensile strength (σu) are ˜415 and ˜450 MPa, respectively; the elongation to fracture (δ) is 4.2%. The precipitation strengthening is reached due to the precipitation of θ″-, θ'-, β″-, and Q'/ C-phase particles. After intermediate ECAP and subsequent aging for 0.5 h, σ0.2 and σu increase to 470 and 535 MPa, respectively; δ increases to ˜9.5%. The plastic deformation leads to the formation of a microstructure that consists of deformation bands characterized by a high density of dislocations. During aging for 0.5 h, the partial decomposition of supersaturated solid solution and formation of segregations within grains and at dislocations and precipitation of the Guinier-Preston zones and β″ phase also occur; all of this ensure the maximum increase in the strength of the AA2014 alloy. As the aging time increases to 8 h, the slight decrease in both σ0.2 and σu to 465 and 515 MPa and δ to ˜6% takes place. It has been shown that the intermediate ECAP does not affect the sequence of the precipitation of main strengthening θ″ and θ' phases during aging. However, in this case, the volume fraction of strengthening particles decreases significantly and their dispersivity increases.

Genetic separation of phototropism and blue light inhibition of stem elongation

NASA Technical Reports Server (NTRS)

Liscum, E.; Young, J. C.; Poff, K. L.; Hangarter, R. P.

1992-01-01

Blue light-induced regulation of cell elongation is a component of the signal response pathway for both phototropic curvature and inhibition of stem elongation in higher plants. To determine if blue light regulates cell elongation in these responses through shared or discrete pathways, phototropism and hypocotyl elongation were investigated in several blue light response mutants in Arabidopsis thaliana. Specifically, the blu mutants that lack blue light-dependent inhibition of hypocotyl elongation were found to exhibit a normal phototropic response. In contrast, a phototropic null mutant (JK218) and a mutant that has a 20- to 30-fold shift in the fluence dependence for first positive phototropism (JK224) showed normal inhibition of hypocotyl elongation in blue light. F1 progeny of crosses between the blu mutants and JK218 showed normal phototropism and inhibition of hypocotyl elongation, and approximately 1 in 16 F2 progeny were double mutants lacking both responses. Thus, blue light-dependent inhibition of hypocotyl elongation and phototropism operate through at least some genetically distinct components.

Seismicity pattern: an indicator of source region of volcanism at convergent plate margins

NASA Astrophysics Data System (ADS)

Špičák, Aleš; Hanuš, Václav; Vaněk, Jiří

2004-04-01

The results of detailed investigation into the geometry of distribution of earthquakes around and below the volcanoes Korovin, Cleveland, Makushin, Yake-Dake, Oshima, Lewotobi, Fuego, Sangay, Nisyros and Montagne Pelée at convergent plate margins are presented. The ISC hypocentral determinations for the period 1964-1999, based on data of global seismic network and relocated by Engdahl, van der Hilst and Buland, have been used. The aim of this study has been to contribute to the solution of the problem of location of source regions of primary magma for calc-alkaline volcanoes spatially and genetically related to the process of subduction. Several specific features of seismicity pattern were revealed in this context. (i) A clear occurrence of the intermediate-depth aseismic gap (IDAG) in the Wadati-Benioff zone (WBZ) below all investigated active volcanoes. We interpret this part of the subducted slab, which does not contain any teleseismically recorded earthquake with magnitude greater than 4.0, as a partially melted domain of oceanic lithosphere and as a possible source of primary magma for calc-alkaline volcanoes. (ii) A set of earthquakes in the shape of a seismically active column (SAC) seems to exists in the continental wedge below volcanoes Korovin, Makushin and Sangay. The seismically active columns probably reach from the Earth surface down to the aseismic gap in the Wadati-Benioff zone. This points to the possibility that the upper mantle overlying the subducted slab does not contain large melted domains, displays an intense fracturing and is not likely to represent the site of magma generation. (iii) In the continental wedge below the volcanoes Cleveland, Fuego, Nisyros, Yake-Dake, Oshima and Lewotobi, shallow seismicity occurs down to the depth of 50 km. The domain without any earthquakes between the shallow seismically active column and the aseismic gap in the Wadati-Benioff zone in the depth range of 50-100 km does not exclude the melting of the mantle also above the slab. (iv) Any earthquake does not exist in the lithospheric wedge below the volcano Montagne Pelée. The source of primary magma could be located in the subducted slab as well as in the overlying mantle wedge. (v) Frequent aftershock sequences accompanying stronger earthquakes in the seismically active columns indicate high fracturing of the wedge below active volcanoes. (vi) The elongated shape of clusters of epicentres of earthquakes of seismically active columns, as well as stable parameters of the available fault plane solutions, seem to reflect the existence of dominant deeply rooted fracture zones below volcanoes. These facts also favour the location of primary magma in the subducting slab rather than in the overlying wedge. We suppose that melts advancing from the slab toward the Earth surface may trigger the observed earthquakes in the continental wedge that is critically pre-stressed by the process of subduction. However, for definitive conclusions it will be necessary to explain the occurrence of earthquake clusters below some volcanoes and the lack of seismicity below others, taking into account the uncertainty of focal depth determination from global seismological data in some regions.

Visual Arts Grades Five through Eight. Black Swamp Arts Scene Course of Study: Talented and Gifted.

ERIC Educational Resources Information Center

Defiance County Office of Education, OH.

This course of study was developed for intermediate and junior high students in the Defiance (Ohio) public schools who are talented and gifted in the visual arts, providing for an in-depth and sequential development of skills and concepts. The program's philosophy stresses that, while the products of the arts are important, a need exists to…

Tank tests to determine the effect of varying design parameters of planing-tail hulls II : effect of varying depth of step, angle of after- body keel, length of afterbody chine, and gross load

NASA Technical Reports Server (NTRS)

Dawson, John R; Mckann, Robert; Hay, Elizabeth S

1946-01-01

The second part of a series of tests made in Langley tank no. 2 to determine the effect of varying design parameters of planing-tail hulls is presented. Results are given to show the effects on resistance characteristics of varying angle of afterbody keel, depth of step, and length of afterbody chine. The effect of varying the gross load is shown for one configuration. The resistance characteristics of planing-tail hulls are compared with those of a conventional flying-boat hull. The forces on the forebody and afterbody of one configuration are compared with the forces on a conventional hull. Increasing the angle of afterbody keel had small effect on hump resistance and no effect on high-speed resistance but increased free-to-trim resistance at intermediate speeds. Increasing the depth of step increased hump resistance, had little effect on high-speed resistance, and increased free-to-trim resistance at intermediate speeds. Omitting the chines on the forward 25 percent of the afterbody had no appreciable effect on resistance. Omitting 70 percent of the chine length had almost no effect on maximum resistance but broadened the hump and increased spray around the afterbody. Load-resistance ratio at the hump decreased more rapidly with increasing load coefficient for the planing-tail hull than for the representative conventional hull, although the load-resistance ratio at the hump was greater for the planing-tail hull than for the conventional hull throughout the range of loads tested. At speeds higher than hump speed, load-resistance ratio for the planing-tail hull was a maximum at a particular gross load and was slightly less at heavier and lighter gross loads. The planing-tail hull was found to have lower resistance than the conventional hull at both the hump and at high speeds, but at intermediate speeds there was little difference. The lower hump resistance of the planing-tail hull was attributed to the ability of the afterbody to carry a greater percentage of the total load while maintaining a higher value of load-resistance ratio.

Size and Carbon Content of Sub-seafloor Microbial Cells at Landsort Deep, Baltic Sea

PubMed Central

Braun, Stefan; Morono, Yuki; Littmann, Sten; Kuypers, Marcel; Aslan, Hüsnü; Dong, Mingdong; Jørgensen, Bo B.; Lomstein, Bente Aa.

2016-01-01

The discovery of a microbial ecosystem in ocean sediments has evoked interest in life under extreme energy limitation and its role in global element cycling. However, fundamental parameters such as the size and the amount of biomass of sub-seafloor microbial cells are poorly constrained. Here we determined the volume and the carbon content of microbial cells from a marine sediment drill core retrieved by the Integrated Ocean Drilling Program (IODP), Expedition 347, at Landsort Deep, Baltic Sea. To determine their shape and volume, cells were separated from the sediment matrix by multi-layer density centrifugation and visualized via epifluorescence microscopy (FM) and scanning electron microscopy (SEM). Total cell-carbon was calculated from amino acid-carbon, which was analyzed by high-performance liquid chromatography (HPLC) after cells had been purified by fluorescence-activated cell sorting (FACS). The majority of microbial cells in the sediment have coccoid or slightly elongated morphology. From the sediment surface to the deepest investigated sample (~60 m below the seafloor), the cell volume of both coccoid and elongated cells decreased by an order of magnitude from ~0.05 to 0.005 μm3. The cell-specific carbon content was 19–31 fg C cell−1, which is at the lower end of previous estimates that were used for global estimates of microbial biomass. The cell-specific carbon density increased with sediment depth from about 200 to 1000 fg C μm−3, suggesting that cells decrease their water content and grow small cell sizes as adaptation to the long-term subsistence at very low energy availability in the deep biosphere. We present for the first time depth-related data on the cell volume and carbon content of sedimentary microbial cells buried down to 60 m below the seafloor. Our data enable estimates of volume- and biomass-specific cellular rates of energy metabolism in the deep biosphere and will improve global estimates of microbial biomass. PMID:27630628

Volar plating for distal radius fractures--do not trust the image intensifier when judging distal subchondral screw length.

PubMed

Park, Derek H; Goldie, Boyd S

2012-09-01

The use of the volar plate to treat distal radius fractures is increasing but despite the theoretical advantages of a volar approach there have been reports of extensor tendon ruptures due to prominent screw tips protruding past the dorsal cortex. The valley in the intermediate column between Lister tubercle and the sigmoid notch of the distal radius makes it difficult to rely on fluoroscopy to judge screw length. Our aim was to quantify the dimensions of this valley and to demonstrate the danger of relying on intraoperative image intensification fluoroscopy to determine lengths of distal screws. We measured the depth of this valley in the intermediate column of the distal radius in 33 patients with computed tomographic (9 patients) or magnetic resonance image (24 patients) scans of the wrist. There was a consistent valley in all images examined [average 1.8 mm (95% confidence interval, 1.6-2.0 mm)]. Thirty-nine percent of wrists had a valley depth of at least 2 mm. Standard lateral views or rotation of the forearm to obtain oblique views does not identify prominent screw tips; and whatever the rotation of the forearm, screw tips protruding beyond dorsal cortex may look as if it is within the bone when in fact it is out. When drilling we suggest noting the depth at which the drill bit just penetrates dorsal cortex and routinely downsize the distal screw length by 2 mm. We caution against relying on flourosocopy when judging the length of the distal subchondral screws.

Multiscale habitat selection of wetland birds in the northern Gulf Coast

USGS Publications Warehouse

Pickens, Bradley A.; King, Sammy L.

2014-01-01

The spatial scale of habitat selection has become a prominent concept in ecology, but has received less attention in coastal ecology. In coastal marshes, broad-scale marsh types are defined by vegetation composition over thousands of hectares, water-level management is applied over hundreds of hectares, and fine-scale habitat is depicted by tens of meters. Individually, these scales are known to affect wetland fauna, but studies have not examined all three spatial scales simultaneously. We investigated wetland bird habitat selection at the three scales and compared single- and multiscale models. From 2009 to 2011, we surveyed marsh birds (i.e., Rallidae, bitterns, grebes), shorebirds, and wading birds in fresh and intermediate (oligohaline) coastal marsh in Louisiana and Texas, USA. Within each year, six repeated surveys of wintering, resident, and migratory breeding birds were conducted at > 100 points (n = 304). The results revealed fine-scale factors, primarily water depth, were consistently better predictors than marsh type or management. However, 10 of 11 species had improved models with the three scales combined. Birds with a linear association with water depth were, correspondingly, most abundant with deeper fresh marsh and permanently impounded water. Conversely, intermediate marsh had a greater abundance of shallow water species, such as king rail Rallus elegans, least bittern Ixobrychus exilis, and sora Porzana carolina. These birds had quadratic relationships with water depth or no relationship. Overall, coastal birds were influenced by multiple scales corresponding with hydrological characteristics. The effects suggest the timing of drawdowns and interannual variability in spring water levels can greatly affect wetland bird abundance.

How fast is the Patagonian shelf-break acidifying?

NASA Astrophysics Data System (ADS)

Orselli, Iole B. M.; Kerr, Rodrigo; Ito, Rosane G.; Tavano, Virginia M.; Mendes, Carlos Rafael B.; Garcia, Carlos A. E.

2018-02-01

Anthropogenic carbon (Cant) concentration is determined according to the TrOCA method, from carbonate system data and hydrographic parameters collected during two consecutive spring cruises (2007 and 2008) in the Argentinean Patagonian shelf-break zone between 36°S and 50°S. Cant has intruded the water column until intermediate depths, with no Cant below 1000 m, in the deeper waters (i.e., North Atlantic Deep Water and Antarctic Bottom Water) of the Northern sector of the study area (i.e., North of 38°S). The higher Cant concentration is observed in Subantarctic Shelf Water in the Southern region, whereas in the Northern sector both Tropical Water and South Atlantic Central Water are equally affected by Cant intrusion. The Antarctic Intermediate Water represents the depth-limit achieved by Cant penetration, reinforcing the role that this water mass plays as an important vehicle to transport Cant to the oceans interior. The estimated Cant average (± method precision) is 46.6 ± 5.3 μmol kg- 1, considering the full depth of the water column. The ocean acidification state (ΔpH) shows an average (± standard deviation) of - 0.11 ± 0.05, thus, indicating an annual pH reduction of - 0.0010 yr- 1 since the Industrial Revolution (c.a. 1750). The degree of aragonite saturation is lowered towards undersaturation levels of calcite. The Patagonian shelf and shelf-break zones-a strong CO2 sink region in the global ocean-are likely a key area for Cant intrusion in the southwestern South Atlantic Ocean.

Fate of Polycyclic Aromatic Hydrocarbons in Seawater from the Western Pacific to the Southern Ocean (17.5°N to 69.2°S) and Their Inventories on the Antarctic Shelf.

PubMed

Cai, Minggang; Liu, Mengyang; Hong, Qingquan; Lin, Jing; Huang, Peng; Hong, Jiajun; Wang, Jun; Zhao, Wenlu; Chen, Meng; Cai, Minghong; Ye, Jun

2016-09-06

Semivolatile organic compounds such as polycyclic aromatic hydrocarbons (PAHs) have the potential to reach pristine environments through long-range transport. To investigate the long-range transport of the PAHs and their fate in Antarctic seawater, dissolved PAHs in the surface waters from the western Pacific to the Southern Ocean (17.5°N to 69.2°S), as well as down to 3500 m PAH profiles in Prydz Bay and the adjacent Southern Ocean, were observed during the 27th Chinese National Antarctic Research Expedition in 2010. The concentrations of Σ9PAH in the surface seawater ranged from not detected (ND) to 21 ng L(-1), with a mean of 4.3 ng L(-1); and three-ring PAHs were the most abundant compounds. Samples close to the Australian mainland displayed the highest levels across the cruise. PAHs originated mainly from pyrogenic sources, such as grass, wood, and coal combustion. Vertical profiles of PAHs in Prydz Bay showed a maximum at a depth of 50 m and less variance with depth. In general, we inferred that the water masses as well as the phytoplankton were possible influencing factors on PAH surface-enrichment depth-depletion distribution. Inventory estimation highlighted the contribution of intermediate and deep seawater on storing PAHs in seawater from Prydz Bay, and suggested that climate change rarely shows the rapid release of the PAHs currently stored in the major reservoirs (intermediate and deep seawater).

Bottom trawling and oxygen minimum zone influences on continental slope benthic community structure off Vancouver Island (NE Pacific)

NASA Astrophysics Data System (ADS)

De Leo, Fabio C.; Gauthier, Maéva; Nephin, Jessica; Mihály, Steven; Juniper, S. Kim

2017-03-01

Understanding responses of benthic ecosystems to cumulative impacts of natural stressors, long-term ocean change and increasing resource exploitation is an emerging area of interest for marine ecologists and environmental managers. Few, if any, studies have quantitatively addressed cumulative effects in the deep sea. We report here on a study from the continental slope off Vancouver Island (Canada) in the northeast Pacific Ocean, where the Oxygen Minimum Zone impinges on seabed habitats that are subjected to widespread bottom trawling, primarily by the fishery for thornyhead (Sebastolobus ssp.). We examined how the benthic megafauna in this area was influenced by varying levels of dissolved oxygen and trawling activity, along a depth gradient that was also likely to shape community composition. Continuous video and sonar records from two ROV surveys (50 linear km total; depth range 300-1400 m) respectively provided data on faunal attributes (composition, abundance and diversity) and the frequency of trawl door marks on the seabed. Faunal and trawl data were compiled in a geo-referenced database along with corresponding dissolved oxygen data, and pooled into 500 m segments for statistical analysis. Trawl mark occurrence peaked between 500 and 1100 m, corresponding to areas of slope subjected to hypoxia (<1.4 ml l-1) and severe hypoxia (<0.5 ml l-1). A combined total of 266,251 megafauna organisms from 87 taxa were enumerated in the two transects. Significant megafaunal assemblages according to depth, trawling intensity and bottom water dissolved oxygen concentration were identified by PERMANOVA analyses, with characterizing taxa identified for all three factors. Depth, dissolved oxygen and trawl mark density accounted for 21% to 52% of the variability in benthic community structure according to multiple regression (DISTLM) models. Species richness was highest at intermediate depths and in areas subject to intermediate levels of trawling, and higher under hypoxia than under severe hypoxia. These statistically significant trends demonstrate that the structuring influences of bottom trawling on deep-sea benthic communities can be observed even where communities are being shaped by strong environmental gradients.

Modelling guided waves in the Alaskan-Aleutian subduction zone

NASA Astrophysics Data System (ADS)

Coulson, Sophie; Garth, Thomas; Reitbrock, Andreas

2016-04-01

Subduction zone guided wave arrivals from intermediate depth earthquakes (70-300 km depth) have a huge potential to tell us about the velocity structure of the subducting oceanic crust as it dehydrates at these depths. We see guided waves as the oceanic crust has a slower seismic velocity than the surrounding material, and so high frequency energy is retained and delayed in the crustal material. Lower frequency energy is not retained in this crustal waveguide and so travels at faster velocities of the surrounding material. This gives a unique observation at the surface with low frequency energy arriving before the higher frequencies. We constrain this guided wave dispersion by comparing the waveforms recorded in real subduction zones with simulated waveforms, produced using finite difference full waveform modelling techniques. This method has been used to show that hydrated minerals in the oceanic crust persist to much greater depths than accepted thermal petrological subduction zone models would suggest in Northern Japan (Garth & Rietbrock, 2014a), and South America (Garth & Rietbrock, in prep). These observations also suggest that the subducting oceanic mantle may be highly hydrated at intermediate depth by dipping normal faults (Garth & Rietbrock 2014b). We use this guided wave analysis technique to constrain the velocity structure of the down going ~45 Ma Pacific plate beneath Alaska. Dispersion analysis is primarily carried out on guided wave arrivals recorded on the Alaskan regional seismic network. Earthquake locations from global earthquake catalogues (ISC and PDE) and regional earthquake locations from the AEIC (Alaskan Earthquake Information Centre) catalogue are used to constrain the slab geometry and to identify potentially dispersive events. Dispersed arrivals are seen at stations close to the trench, with high frequency (>2 Hz) arrivals delayed by 2 - 4 seconds. This dispersion is analysed to constrain the velocity and width of the proposed waveguide. The velocity structure of this relatively young subducting plate is compared to the velocity structure resolved in the older oceanic lithosphere subducted beneath Northern Japan. We also use guided wave observations to investigate the thickness and low velocity structure of the subducting Yakutat terrain. Additionally we discuss the dependence of the inferred slab geometry on the earthquake catalogues that are used.

Depth-resolved measurement of ocular fundus pulsations by low-coherence tissue interferometry

NASA Astrophysics Data System (ADS)

Dragostinoff, Nikolaus; Werkmeister, René M.; Gröschl, Martin; Schmetterer, Leopold

2009-09-01

A device that allows for the measurement of ocular fundus pulsations at preselected axial positions of a subject's eye is presented. Unlike previously presented systems, which only allow for observation of the strongest reflecting retinal layer, our system enables the measurement of fundus pulsations at a preselected ocular layer. For this purpose the sample is illuminated by light of low temporal coherence. The layer is then selected by positioning one mirror of a Michelson interferometer according to the depth of the layer. The device contains a length measurement system based on partial coherence interferometry and a line scan charge-coupled device camera for recording and online inspection of the fringe system. In-vivo measurements in healthy humans are performed as proof of principle. The algorithms used for enhancing the recorded images are briefly introduced. The contrast of the observed interference pattern is evaluated for different positions of the measurement mirror and at various distances from the front surface of the cornea. The applications of such a system may be wide, including assessment of eye elongation during myopia development and blood-flow-related changes in intraocular volume.

Non-Rayleigh control of upper-ocean Cd isotope fractionation in the western South Atlantic

NASA Astrophysics Data System (ADS)

Xie, Ruifang C.; Galer, Stephen J. G.; Abouchami, Wafa; Rijkenberg, Micha J. A.; de Baar, Hein J. W.; De Jong, Jeroen; Andreae, Meinrat O.

2017-08-01

We present seawater Cd isotopic compositions in five depth profiles and a continuous surface water transect, from 50°S to the Equator, in the western South Atlantic, sampled during GEOTRACES cruise 74JC057 (GA02 section, Leg 3), and investigate the mechanisms governing Cd isotope cycling in the upper and deep ocean. The depth profiles generally display high ε 112 / 110Cd at the surface and decrease with increasing depth toward values typical of Antarctic Bottom Water (AABW). However, at stations north of the Subantarctic Front, the decrease in ε 112 / 110Cd is interrupted by a shift to values intermediate between those of surface and bottom waters, which occurs at depths occupied by North Atlantic Deep Water (NADW). This pattern is associated with variations in Cd concentration from low surface values to a maximum at mid-depths and is attributed to preferential utilization of light Cd by phytoplankton in the surface ocean. Our new results show that in this region Cd-deficient waters do not display the extreme, highly fractionated ε 112 / 110Cd reported in some earlier studies from other oceanic regions. Instead, in the surface and subsurface southwest (SW) Atlantic, when [Cd] drops below 0.1 nmol kg-1, ε 112 / 110Cd are relatively homogeneous and cluster around a value of +3.7, in agreement with the mean value of 3.8 ± 3.3 (2SD, n = 164) obtained from a statistical evaluation of the global ocean Cd isotope dataset. We suggest that Cd-deficient surface waters may acquire their Cd isotope signature via sorption of Cd onto organic ligands, colloids or bacterial/picoplankton extracellular functional groups. Alternatively, we show that an open system, steady-state model is in good accord with the observed Cd isotope systematics in the upper ocean north of the Southern Ocean. The distribution of ε 112 / 110Cd in intermediate and deep waters is consistent with the water mass distribution, with the north-south variations reflecting changes in the mixing proportion of NADW and either AABW or AAIW depending on the depth. Overall, the SW Atlantic Cd isotope dataset demonstrates that the large-scale ocean circulation exerts the primary control on ε 112 / 110Cd cycling in the global deep ocean.

Thermal Phase Variations of WASP-12b: Defying Predictions

NASA Technical Reports Server (NTRS)

Cowan, Nicolas B.; Machalek, Pavel; Croll, Bryce; Shekhtman, Louis M.; Burrows, Adam; Deming, Drake; Greene, Tom; Hora, Joseph L.

2012-01-01

We report Warm Spitzer full-orbit phase observations of WASP-12b at 3.6 and 4.5 micrometers. This extremely inflated hot Jupiter is thought to be overflowing its Roche lobe, undergoing mass loss and accretion onto its host star, and has been claimed to have a C/O ratio in excess of unity. We are able to measure the transit depths, eclipse depths, thermal and ellipsoidal phase variations at both wavelengths. The large-amplitude phase variations, combined with the planet's previously measured dayside spectral energy distribution, are indicative of non-zero Bond albedo and very poor day-night heat redistribution. The transit depths in the mid-infrared-(R(sub p)/R(sub *))(sup 2) = 0.0123(3) and 0.0111(3) at 3.6 and 4.5 micrometers, respectively-indicate that the atmospheric opacity is greater at 3.6 than at 4.5 micrometers, in disagreement with model predictions, irrespective of C/O ratio. The secondary eclipse depths are consistent with previous studies: F(sub day)/F(sub *) = 0.0038(4) and 0.0039(3) at 3.6 and 4.5 micrometers, respectively. We do not detect ellipsoidal variations at 3.6 micrometers, but our parameter uncertainties-estimated via prayer-bead Monte Carlo-keep this non-detection consistent with model predictions. At 4.5 micrometers, on the other hand, we detect ellipsoidal variations that are much stronger than predicted. If interpreted as a geometric effect due to the planet's elongated shape, these variations imply a 3:2 ratio for the planet's longest:shortest axes and a relatively bright day-night terminator. If we instead presume that the 4.5 micrometer ellipsoidal variations are due to uncorrected systematic noise and we fix the amplitude of the variations to zero, the best-fit 4.5 micrometer transit depth becomes commensurate with the 3.6 micrometer depth, within the uncertainties. The relative transit depths are then consistent with a solar composition and short scale height at the terminator. Assuming zero ellipsoidal variations also yields a much deeper 4.5 micrometer eclipse depth, consistent with a solar composition and modest temperature inversion. We suggest future observations that could distinguish between these two scenarios.

Thermal Phase Variations of WASP-12b: Defying Predictions

NASA Astrophysics Data System (ADS)

Cowan, Nicolas B.; Machalek, Pavel; Croll, Bryce; Shekhtman, Louis M.; Burrows, Adam; Deming, Drake; Greene, Tom; Hora, Joseph L.

2012-03-01

We report Warm Spitzer full-orbit phase observations of WASP-12b at 3.6 and 4.5 μm. This extremely inflated hot Jupiter is thought to be overflowing its Roche lobe, undergoing mass loss and accretion onto its host star, and has been claimed to have a C/O ratio in excess of unity. We are able to measure the transit depths, eclipse depths, thermal and ellipsoidal phase variations at both wavelengths. The large-amplitude phase variations, combined with the planet's previously measured dayside spectral energy distribution, are indicative of non-zero Bond albedo and very poor day-night heat redistribution. The transit depths in the mid-infrared—(Rp /R *)2 = 0.0123(3) and 0.0111(3) at 3.6 and 4.5 μm, respectively—indicate that the atmospheric opacity is greater at 3.6 than at 4.5 μm, in disagreement with model predictions, irrespective of C/O ratio. The secondary eclipse depths are consistent with previous studies: F day/F * = 0.0038(4) and 0.0039(3) at 3.6 and 4.5 μm, respectively. We do not detect ellipsoidal variations at 3.6 μm, but our parameter uncertainties—estimated via prayer-bead Monte Carlo—keep this non-detection consistent with model predictions. At 4.5 μm, on the other hand, we detect ellipsoidal variations that are much stronger than predicted. If interpreted as a geometric effect due to the planet's elongated shape, these variations imply a 3:2 ratio for the planet's longest:shortest axes and a relatively bright day-night terminator. If we instead presume that the 4.5 μm ellipsoidal variations are due to uncorrected systematic noise and we fix the amplitude of the variations to zero, the best-fit 4.5 μm transit depth becomes commensurate with the 3.6 μm depth, within the uncertainties. The relative transit depths are then consistent with a solar composition and short scale height at the terminator. Assuming zero ellipsoidal variations also yields a much deeper 4.5 μm eclipse depth, consistent with a solar composition and modest temperature inversion. We suggest future observations that could distinguish between these two scenarios.

L1CAM: amending the "low-risk" category in endometrial carcinoma.

PubMed

Kommoss, Felix; Kommoss, Friedrich; Grevenkamp, Friederike; Bunz, Anne-Kathrin; Taran, Florin-Andrei; Fend, Falko; Brucker, Sara Y; Wallwiener, Diethelm; Schönfisch, Birgitt; Greif, Karen; Lax, Sigurd; Staebler, Annette; Kommoss, Stefan

2017-02-01

Low- and intermediate-risk endometrial carcinomas have an excellent prognosis. Nonetheless, a small subgroup of such patients will experience unexpected relapse. Recently L1CAM was suggested to be a strong prognosticator in endometrial carcinoma. The focus of our study was on low- and intermediate-risk disease, where no or only limited adjuvant treatment is recommended according to current guidelines. Endometrial carcinomas of low, intermediate and high-intermediate risk according to published 2016 consensus guidelines were identified. The study was limited to cases with previous central pathology review focusing on histotype, depth of myometrial invasion, presence of lymphovascular space invasion (LVSI) and MELF pattern of invasion. Standard L1CAM immunohistochemistry was performed. Disease-specific uni- and multivariate survival analyses were calculated. A total of 344 cases were available for immunohistochemistry (low-risk: n = 250; intermediate-risk: n = 67; high-intermediate-risk: n = 27). L1CAM positivity rates were: 29/344 (8.4 %; all cases), 18/250 (7.2 %; low-risk), 6/67 (9.0 %; intermediate-risk) and 5/27 (18.5 %; high-intermediate-risk). Expression of L1CAM was independent of LVSI and MELF. L1CAM was a significant independent prognosticator for disease-specific survival with a hazard ratio of 5.98 [CI 1.50-22.14, p = 0.012]. Adverse prognostic significance of L1CAM positivity was maintained after low-risk subgroup analysis (5-year disease-specific survival rates 71.8 vs. 100 %, p < 0.0001). All four tumour-related deaths in the subgroup of low-risk disease occurred in patients with L1CAM-positive tumours. The current definition of "low-risk" in endometrial carcinoma should be amended. "Low-risk carcinomas" should be limited to L1CAM-negative tumours. L1CAM status will play a key role in future algorithms to tailor adjuvant treatment and patient follow-up strategies.

Rheosensing by impulsive cells at intermediate Reynolds numbers

NASA Astrophysics Data System (ADS)

Mathijssen, Arnold; Bhamla, Saad; Prakash, Manu

2017-11-01

For aquatic organisms, mechanical signals are often carried by the surrounding liquid, through viscous and inertial forces. Here we consider a unicellular yet millimetric ciliate, Spirostomum ambiguum, as a model organism to study hydrodynamic sensing. This protist typically swims at moderate Reynolds numbers, Re < 0.5, but upon stimulation it surges to Re > 100 during impulsive contractions where its elongated body recoils within milliseconds. First, using high-speed PIV and an electrophysiology setup, we deliver controlled voltage pulses to induce these rapid contractions and visualise the vortex flows generated thereby. By comparing these measurements with CFD simulations the range of these hydrodynamic ``signals'' is characterized. Second, we probe the mechano-sensing of the organism with externally applied flows and find a critical shear rate necessary to trigger a contraction. The combination of high Re flow generation and rheosensing could facilitate intercellular communication over large distances. Please also see our other talk ``Collective hydrodynamic communication through ultra-fast contractions''.

Atomic level characterization of cadmium selenide nanocrystal systems using atomic number contrast scanning transmission electron microscopy and Rutherford backscattering spectroscopy

NASA Astrophysics Data System (ADS)

McBride, James R.

This project involved the characterization of CdSe nanocrystals. Through the use of Atomic Number Contrast Scanning Transmission Electron Microscopy (Z-STEM) and Rutherford Backscattering Spectroscopy (RBS), atomic level structure and chemical information was obtained. Specifically, CdSe nanocrystals produced using a mixture of hexadecylamine (HDA) and trioctylphosphine oxide (TOPO) were determined to be spherical compared to nanocrystals produced in TOPO only, which had elongated (101) facets. Additionally, the first Z-STEM images of CdSe/ZnS core/shell nanocrystals were obtained. From these images, the growth mechanism of the ZnS shell was determined and the existence of non-fluorescent ZnS particles was confirmed. Through collaboration with Quantum Dot Corp., core/shell nanocrystals with near unity quantum yield were developed. These core/shell nanocrystals included a US intermediate layer to improve shell coverage.

AJIPHASE®: A Highly Efficient Synthetic Method for One-Pot Peptide Elongation in the Solution Phase by an Fmoc Strategy.

PubMed

Takahashi, Daisuke; Inomata, Tatsuji; Fukui, Tatsuya

2017-06-26

We previously reported an efficient peptide synthesis method, AJIPHASE®, that comprises repeated reactions and isolations by precipitation. This method utilizes an anchor molecule with long-chain alkyl groups as a protecting group for the C-terminus. To further improve this method, we developed a one-pot synthesis of a peptide sequence wherein the synthetic intermediates were isolated by solvent extraction instead of precipitation. A branched-chain anchor molecule was used in the new process, significantly enhancing the solubility of long peptides and the operational efficiency compared with the previous method, which employed precipitation for isolation and a straight-chain aliphatic group. Another prerequisite for this solvent-extraction-based strategy was the use of thiomalic acid and DBU for Fmoc deprotection, which facilitates the removal of byproducts, such as the fulvene adduct. © 2017 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.

A Heart on Pluto

NASA Image and Video Library

2015-07-08

In the early morning hours of July 8, 2015, mission scientists received this new view of Pluto -- the most detailed yet returned by the Long Range Reconnaissance Imager (LORRI) aboard New Horizons. The image was taken on July 7, when the NASA spacecraft was just under 5 million miles (8 million kilometers) from Pluto, and is the first to be received since the July 4 anomaly that sent the spacecraft into safe mode. This view is centered roughly on the area that will be seen close-up during New Horizons' July 14 closest approach. This side of Pluto is dominated by three broad regions of varying brightness. Most prominent are an elongated dark feature at the equator, informally known as "the whale," and a large heart-shaped bright area measuring some 1,200 miles (2,000 kilometers) across on the right. Above those features is a polar region that is intermediate in brightness. http://photojournal.jpl.nasa.gov/catalog/PIA19702

Hybrid films of chitosan, cellulose nanofibrils and boric acid: Flame retardancy, optical and thermo-mechanical properties.

PubMed

Uddin, Khan M A; Ago, Mariko; Rojas, Orlando J

2017-12-01

Chitosan (CS), cellulose nanofibrils (CNF) and boric acid, the latter of which was used as flame retardant, were combined in transparent, hybrid films that were produced by solvent casting. The flammability and the thermal stability of the films were studied with respect to the loading of the inorganic component. Chitosan films displayed fire retardancy properties, which were enhanced in the presence of boric acid. CNF films, in contrast to those from chitosan, were readily flammable; however, when combined with boric acid (30w%), they became self-extinguishing. Most remarkably, bicomponent films comprising CNF and chitosan, displayed better fire retardancy than that of neat CS films. Moreover, boric acid improved the thermal stability of the bicomponent films. The tensile strength and Young's modulus of CS, CNF and CS-CNF films improved at intermediate boric acid addition, although a negative effect on elongation was observed. Copyright © 2017 Elsevier Ltd. All rights reserved.

Metabolic Engineering toward Sustainable Production of Nylon-6.

PubMed

Turk, Stefan C H J; Kloosterman, Wigard P; Ninaber, Dennis K; Kolen, Karin P A M; Knutova, Julia; Suir, Erwin; Schürmann, Martin; Raemakers-Franken, Petronella C; Müller, Monika; de Wildeman, Stefaan M A; Raamsdonk, Leonie M; van der Pol, Ruud; Wu, Liang; Temudo, Margarida F; van der Hoeven, Rob A M; Akeroyd, Michiel; van der Stoel, Roland E; Noorman, Henk J; Bovenberg, Roel A L; Trefzer, Axel C

2016-01-15

Nylon-6 is a bulk polymer used for many applications. It consists of the non-natural building block 6-aminocaproic acid, the linear form of caprolactam. Via a retro-synthetic approach, two synthetic pathways were identified for the fermentative production of 6-aminocaproic acid. Both pathways require yet unreported novel biocatalytic steps. We demonstrated proof of these bioconversions by in vitro enzyme assays with a set of selected candidate proteins expressed in Escherichia coli. One of the biosynthetic pathways starts with 2-oxoglutarate and contains bioconversions of the ketoacid elongation pathway known from methanogenic archaea. This pathway was selected for implementation in E. coli and yielded 6-aminocaproic acid at levels up to 160 mg/L in lab-scale batch fermentations. The total amount of 6-aminocaproic acid and related intermediates generated by this pathway exceeded 2 g/L in lab-scale fed-batch fermentations, indicating its potential for further optimization toward large-scale sustainable production of nylon-6.

Nucleation and growth mechanism for flame synthesis of MoO2 hollow microchannels with nanometer wall thickness.

PubMed

Merchan-Merchan, Wilson; Saveliev, Alexei V; Taylor, Aaron M

2009-12-01

The growth and morphological evolution of molybdenum-oxide microstructures formed in the high temperature environment of a counter-flow oxy-fuel flame using molybdenum probes is studied. Experiments conducted using various probe retention times show the sequence of the morphological changes. The morphological row begins with micron size objects exhibiting polygonal cubic shape, develops into elongated channels, changes to large structures with leaf-like shape, and ends in dendritic structures. Time of probe-flame interaction is found to be a governing parameter controlling the wide variety of morphological patterns; a molecular level growth mechanism is attributed to their development. This study reveals that the structures are grown in several consecutive stages: material "evaporation and transportation", "transformation", "nucleation", "initial growth", "intermediate growth", and "final growth". XRD analysis shows that the chemical compositions of all structures correspond to MoO(2).

Portable boring machine

DOE Office of Scientific and Technical Information (OSTI.GOV)

Sverdlin, A.

This patent describes a boring machine for boring in situ spaced axially aligned bearing housings on an internal combustion engine body after removal of a crankshaft from the engine body. The bearing housings include a pair of opposed end bearing housings and intermediate bearing housings between the end bearing housings. The portable boring machine comprises: an elongate rotary boring bar mounted concentrically within the bearing housings and having ends extending outwardly from the opposed end bearing housings; an end mounting member wholly supported by each of the end bearing housings and positioned between the boring bar and the associated endmore » bearing housing for supporting the boring bar thereat. Each end mounting member includes an inner concentric portion engaging the boring bar and mounted for rotation therewith, an outer concentric portion engaging the inner surface of the adjacent end bearing housing and permitting relative rotation of the inner concentric portion and the boring bar, and adjusting means.« less

Retinoic acid from the meninges regulates cortical neuron generation.

PubMed

Siegenthaler, Julie A; Ashique, Amir M; Zarbalis, Konstantinos; Patterson, Katelin P; Hecht, Jonathan H; Kane, Maureen A; Folias, Alexandra E; Choe, Youngshik; May, Scott R; Kume, Tsutomu; Napoli, Joseph L; Peterson, Andrew S; Pleasure, Samuel J

2009-10-30

Extrinsic signals controlling generation of neocortical neurons during embryonic life have been difficult to identify. In this study we demonstrate that the dorsal forebrain meninges communicate with the adjacent radial glial endfeet and influence cortical development. We took advantage of Foxc1 mutant mice with defects in forebrain meningeal formation. Foxc1 dosage and loss of meninges correlated with a dramatic reduction in both neuron and intermediate progenitor production and elongation of the neuroepithelium. Several types of experiments demonstrate that retinoic acid (RA) is the key component of this secreted activity. In addition, Rdh10- and Raldh2-expressing cells in the dorsal meninges were either reduced or absent in the Foxc1 mutants, and Rdh10 mutants had a cortical phenotype similar to the Foxc1 null mutants. Lastly, in utero RA treatment rescued the cortical phenotype in Foxc1 mutants. These results establish RA as a potent, meningeal-derived cue required for successful corticogenesis.

Conformational Flexibility of Metazoan Fatty Acid Synthase Enables Catalysis

PubMed Central

Brignole, Edward J.; Smith, Stuart; Asturias, Francisco J.

2008-01-01

The metazoan cytosolic fatty acid synthase (FAS) contains all of the enzymes required for de novo fatty acid biosynthesis covalently linked around two reaction chambers. While the 3D architecture of FAS has been mostly defined, it is unclear how reaction intermediates can transfer between distant catalytic domains. Using single-particle electron microscopy we have identified a near continuum of conformations consistent with remarkable flexibility of FAS. The distribution of conformations was influenced by the presence of substrates and altered by different catalytic mutations suggesting a direct correlation between conformation and specific enzymatic activities. 3D reconstructions were interpreted by docking high-resolution structures of individual domains and illustrate that the substrate loading and condensation domains dramatically swing and swivel to access substrates within either reaction chamber. Concomitant rearrangement of the β-carbon processing domains synchronizes acyl-chain reduction in one chamber with acyl-chain elongation in the other. PMID:19151726

The unique chemistry of Eastern Mediterranean water masses selects for distinct microbial communities by depth.

PubMed

Techtmann, Stephen M; Fortney, Julian L; Ayers, Kati A; Joyner, Dominique C; Linley, Thomas D; Pfiffner, Susan M; Hazen, Terry C

2015-01-01

The waters of the Eastern Mediterranean are characterized by unique physical and chemical properties within separate water masses occupying different depths. Distinct water masses are present throughout the oceans, which drive thermohaline circulation. These water masses may contain specific microbial assemblages. The goal of this study was to examine the effect of physical and geological phenomena on the microbial community of the Eastern Mediterranean water column. Chemical measurements were combined with phospholipid fatty acid (PLFA) analysis and high-throughput 16S rRNA sequencing to characterize the microbial community in the water column at five sites. We demonstrate that the chemistry and microbial community of the water column were stratified into three distinct water masses. The salinity and nutrient concentrations vary between these water masses. Nutrient concentrations increased with depth, and salinity was highest in the intermediate water mass. Our PLFA analysis indicated different lipid classes were abundant in each water mass, suggesting that distinct groups of microbes inhabit these water masses. 16S rRNA gene sequencing confirmed the presence of distinct microbial communities in each water mass. Taxa involved in autotrophic nitrogen cycling were enriched in the intermediate water mass suggesting that microbes in this water mass may be important to the nitrogen cycle of the Eastern Mediterranean. The Eastern Mediterranean also contains numerous active hydrocarbon seeps. We sampled above the North Alex Mud Volcano, in order to test the effect of these geological features on the microbial community in the adjacent water column. The community in the waters overlaying the mud volcano was distinct from other communities collected at similar depths and was enriched in known hydrocarbon degrading taxa. Our results demonstrate that physical phenomena such stratification as well as geological phenomena such as mud volcanoes strongly affect microbial community structure in the Eastern Mediterranean water column.

Rare earth element distributions in the West Pacific: Trace element sources and conservative vs. non-conservative behavior

NASA Astrophysics Data System (ADS)

Behrens, Melanie K.; Pahnke, Katharina; Paffrath, Ronja; Schnetger, Bernhard; Brumsack, Hans-Jürgen

2018-03-01

Recent studies suggest that transport and water mass mixing may play a dominant role in controlling the distribution of dissolved rare earth element concentrations ([REE]) at least in parts of the North and South Atlantic and the Pacific Southern Ocean. Here we report vertically and spatially high-resolution profiles of dissolved REE concentrations ([REE]) along a NW-SE transect in the West Pacific and examine the processes affecting the [REE] distributions in this area. Surface water REE patterns reveal sources of trace element (TE) input near South Korea and in the tropical equatorial West Pacific. Positive europium anomalies and middle REE enrichments in surface and subsurface waters are indicative of TE input from volcanic islands and fingerprint in detail small-scale equatorial zonal eastward transport of TEs to the iron-limited tropical East Pacific. The low [REE] of North and South Pacific Tropical Waters and Antarctic Intermediate Water are a long-range (i.e., preformed) laterally advected signal, whereas increasing [REE] with depth within North Pacific Intermediate Water result from release from particles. Optimum multiparameter analysis of deep to bottom waters indicates a dominant control of lateral transport and mixing on [REE] at the depth of Lower Circumpolar Deep Water (≥3000 m water depth; ∼75-100% explained by water mass mixing), allowing the northward tracing of LCDW to ∼28°N in the Northwest Pacific. In contrast, scavenging in the hydrothermal plumes of the Lau Basin and Tonga-Fiji area at 1500-2000 m water depth leads to [REE] deficits (∼40-60% removal) and marked REE fractionation in the tropical West Pacific. Overall, our data provide evidence for active trace element input both near South Korea and Papua New Guinea, and for a strong lateral transport component in the distribution of dissolved REEs in large parts of the West Pacific.

The Unique Chemistry of Eastern Mediterranean Water Masses Selects for Distinct Microbial Communities by Depth

PubMed Central

Techtmann, Stephen M.; Fortney, Julian L.; Ayers, Kati A.; Joyner, Dominique C.; Linley, Thomas D.; Pfiffner, Susan M.; Hazen, Terry C.

2015-01-01

The waters of the Eastern Mediterranean are characterized by unique physical and chemical properties within separate water masses occupying different depths. Distinct water masses are present throughout the oceans, which drive thermohaline circulation. These water masses may contain specific microbial assemblages. The goal of this study was to examine the effect of physical and geological phenomena on the microbial community of the Eastern Mediterranean water column. Chemical measurements were combined with phospholipid fatty acid (PLFA) analysis and high-throughput 16S rRNA sequencing to characterize the microbial community in the water column at five sites. We demonstrate that the chemistry and microbial community of the water column were stratified into three distinct water masses. The salinity and nutrient concentrations vary between these water masses. Nutrient concentrations increased with depth, and salinity was highest in the intermediate water mass. Our PLFA analysis indicated different lipid classes were abundant in each water mass, suggesting that distinct groups of microbes inhabit these water masses. 16S rRNA gene sequencing confirmed the presence of distinct microbial communities in each water mass. Taxa involved in autotrophic nitrogen cycling were enriched in the intermediate water mass suggesting that microbes in this water mass may be important to the nitrogen cycle of the Eastern Mediterranean. The Eastern Mediterranean also contains numerous active hydrocarbon seeps. We sampled above the North Alex Mud Volcano, in order to test the effect of these geological features on the microbial community in the adjacent water column. The community in the waters overlaying the mud volcano was distinct from other communities collected at similar depths and was enriched in known hydrocarbon degrading taxa. Our results demonstrate that physical phenomena such stratification as well as geological phenomena such as mud volcanoes strongly affect microbial community structure in the Eastern Mediterranean water column. PMID:25807542

The VoiLA ocean bottom seismic array: First insights into the intermediate depth seismicity distribution in the Lesser Antilles

NASA Astrophysics Data System (ADS)

Rietbrock, A.; Harmon, N.; Goes, S. D. B.; Krueger, F.; Bie, L.; Collier, J.; Rychert, C.; Hicks, S. P.; Kendall, J. M.; Henstock, T.

2017-12-01

Subduction zones are the most important regions for the exchange of water between the Oceans and the solid Earth. Hydrated oceanic lithosphere is subducted into the deeper Earth and its bound water content is continuously released in a heterogeneous process as temperature and pressure rises with depth. As only small amounts of water can significantly alter the physical properties of materials at depth, water is believed to play a major role in the seismogenesis for both, the shallow megathrust responsible for large destructive earthquakes and the occurrence of Wadati-Benioff zone seismicity at intermediate depth. Up to now most of our observations have been made around the Circum-Pacific subduction were predominantly oceanic lithosphere generated at fast-spreading ridges is being subducted. Contrary, observations of dehydration processes occurring in subducting oceanic lithosphere generated at slow spreading ridges are limited. The Lesser Antilles subduction zone therefore provides the unique opportunity to study the linkage between seismicity and de-hydration reaction for subductiong lithosphere generated at a slow-spreading ridge. Between March 2016 and May 2017 34 Ocean Bottom Broadband Seismometers were deployed along the Lesser Antilles margin in the area 12°-18° N and 63.5°-59.5° W. The network consisted out of 24 DEPAS instruments with 120s Trillium compact sensors provided by the instrument pool of AWI (Germany) and 10 OBSIP instruments with Trillium 240s sensors provided by Scripps Institute of Oceanography (US). All instruments were recovered and only 2 OBSIP instruments did not collect any usable data. The remaining 32 instruments did record continuously all components and no clock timing issues were identified. Preliminary screening of the data shows a low noise level and numerous local/regional earthquakes with M<3 have been detected. We will present the recorded seismicity distribution and earthquake locations based on a refined 1D/2D velocity model.

Sources of sulfate supporting anaerobic metabolism in a contaminated aquifer

USGS Publications Warehouse

Ulrich, G.A.; Breit, G.N.; Cozzarelli, I.M.; Suflita, J.M.

2003-01-01

Field and laboratory techniques were used to identify the biogeochemical factors affecting sulfate reduction in a shallow, unconsolidated alluvial aquifer contaminated with landfill leachate. Depth profiles of 35S-sulfate reduction rates in aquifer sediments were positively correlated with the concentration of dissolved sulfate. Manipulation of the sulfate concentration in samples revealed a Michaelis-Menten-like relationship with an apparent Km and Vmax of approximately 80 and 0.83 ??M SO4-2??day-1, respectively. The concentration of sulfate in the core of the leachate plume was well below 20 ??M and coincided with very low reduction rates. Thus, the concentration and availability of this anion could limit in situ sulfate-reducing activity. Three sulfate sources were identified, including iron sulfide oxidation, barite dissolution, and advective flux of sulfate. The relative importance of these sources varied with depth in the alluvium. The relatively high concentration of dissolved sulfate at the water table is attributed to the microbial oxidation of iron sulfides in response to fluctuations of the water table. At intermediate depths, barite dissolves in undersaturated pore water containing relatively high concentrations of dissolved barium (???100 ??M) and low concentrations of sulfate. Dissolution is consistent with the surface texture of detrital barite grains in contact with leachate. Laboratory incubations of unamended and barite-amended aquifer slurries supported the field observation of increasing concentrations of barium in solution when sulfate reached low levels. At a deeper highly permeable interval just above the confining bottom layer of the aquifer, sulfate reduction rates were markedly higher than rates at intermediate depths. Sulfate is supplied to this deeper zone by advection of uncontaminated groundwater beneath the landfill. The measured rates of sulfate reduction in the aquifer also correlated with the abundance of accumulated iron sulfide in this zone. This suggests that the current and past distributions of sulfate-reducing activity are similar and that the supply of sulfate has been sustained at these sites.

Spatial variability in distribution and prevalence of Caribbean scleractinian coral and octocoral diseases. II. Genera-level analysis.

PubMed

Cróquer, Aldo; Weil, Ernesto

2009-02-25

Geographic assessments of coral/octocoral diseases affecting major reef-building genera and abundant reef species are important to understand their local and geographic spatial-temporal variability and their impact. The status and spatial variability of major Caribbean coral/octocoral diseases affecting important reef-building coral (Montastraea, Diploria, Siderastrea, Stephanocoenia, Porites, and Agaricia) and common, widespread octocoral genera (Gorgonia and Pseudopterogorgia) was assessed along 4 permanent 10 x 2 m band-transects in each of 3 depth habitats (<4, 5-12 and >15 m) on 2 reefs in 6 countries across the wider Caribbean during the summer and fall of 2005. A permutational multivariate analysis of variance was used to test the spatial variability (countries, reef sites and depth habitats) in prevalence of major diseases in these genera. We found a significant interaction of disease prevalence in the different coral and octocoral genera between reef sites and habitats (depth intervals). Montastraea was primarily affected by both white plague (WP-II) and yellow band disease in deep (16.9 +/- SE 16% and 16.9 +/- SE 2.3%) and intermediate (8.1 +/- SE 1.6% and 15.5 +/- SE 2.3%) depth habitats of Culebrita (Puerto Rico) and Chub Cut (Bermuda), respectively. Prevalence of multiple diseases simultaneously and other compromised-health problems affecting Montastraea colonies varied between 0.2 to 2% and 0.2 to 1.8%, respectively. Agaricia and Diploria were mostly affected by WP-II (0.5 to 16%), black band disease (0.4 to 5%) and Caribbean ciliate infections (0.2 to 12%). Siderastrea and Stephanocoenia were mainly affected by dark spots disease in Curaçao, with higher prevalence in intermediate (40.5 +/- SE 6.2%) and deep (26.6 +/- SE 4.2%) habitats. Aspergillosis and other compromised-health conditions affected Gorgonia ventalina (0.2 to 8%) and other common and widespread octocoral genera (1 to 14%), respectively.

The unique chemistry of Eastern Mediterranean water masses selects for distinct microbial communities by depth

DOE PAGES

Techtmann, Stephen M.; Fortney, Julian L.; Ayers, Kati A.; ...

2015-03-25

The waters of the Eastern Mediterranean are characterized by unique physical and chemical properties within separate water masses occupying different depths. Distinct water masses are present throughout the oceans, which drive thermohaline circulation. These water masses may contain specific microbial assemblages. The goal of this study was to examine the effect of physical and geological phenomena on the microbial community of the Eastern Mediterranean water column. Chemical measurements were combined with phospholipid fatty acid (PLFA) analysis and high-throughput 16S rRNA sequencing to characterize the microbial community in the water column at five sites. We demonstrate that the chemistry and microbialmore » community of the water column were stratified into three distinct water masses. The salinity and nutrient concentrations vary between these water masses. Nutrient concentrations increased with depth, and salinity was highest in the intermediate water mass. Our PLFA analysis indicated different lipid classes were abundant in each water mass, suggesting that distinct groups of microbes inhabit these water masses. 16S rRNA gene sequencing confirmed the presence of distinct microbial communities in each water mass. Taxa involved in autotrophic nitrogen cycling were enriched in the intermediate water mass suggesting that microbes in this water mass may be important to the nitrogen cycle of the Eastern Mediterranean. The Eastern Mediterranean also contains numerous active hydrocarbon seeps. We sampled above the North Alex Mud Volcano, in order to test the effect of these geological features on the microbial community in the adjacent water column. The community in the waters overlaying the mud volcano was distinct from other communities collected at similar depths and was enriched in known hydrocarbon degrading taxa. Furthermore, our results demonstrate that physical phenomena such stratification as well as geological phenomena such as mud volcanoes strongly affect microbial community structure in the Eastern Mediterranean water column.« less

Slab seismicity in the Western Hellenic Subduction Zone: Constraints from tomography and double-difference relocation

NASA Astrophysics Data System (ADS)

Halpaap, Felix; Rondenay, Stéphane; Ottemöller, Lars

2016-04-01

The Western Hellenic subduction zone is characterized by a transition from oceanic to continental subduction. In the southern oceanic portion of the system, abundant seismicity reaches intermediate depths of 100-120 km, while the northern continental portion rarely exhibits deep earthquakes. Our study aims to investigate how this oceanic-continental transition affects fluid release and related seismicity along strike, by focusing on the distribution of intermediate depth earthquakes. To obtain a detailed image of the seismicity, we carry out a tomographic inversion for P- and S-velocities and double-difference earthquake relocation using a dataset of unprecedented spatial coverage in this area. Here we present results of these analyses in conjunction with high-resolution profiles from migrated receiver function images obtained from the MEDUSA experiment. We generate tomographic models by inverting data from 237 manually picked, well locatable events recorded at up to 130 stations. Stations from the permanent Greek network and the EGELADOS experiment supplement the 3-D coverage of the modeled domain, which covers a large part of mainland Greece and surrounding offshore areas. Corrections for the sphericity of the Earth and our update to the SIMULR16 package, which now allows S-inversion, help improve our previous models. Flexible gridding focusses the inversion on the domains of highest gradient around the slab, and we evaluate the resolution with checker board tests. We use the resulting velocity model to relocate earthquakes via the Double-Difference method, using a large dataset of differential traveltimes obtained by crosscorrelation of seismograms. Tens of earthquakes align along two planes forming a double seismic zone in the southern, oceanic portion of the subduction zone. With increasing subduction depth, the earthquakes appear closer to the center of the slab, outlining probable deserpentinization of the slab and concomitant eclogitization of dry crustal rocks. Against expectations, we relocate one robust deep event at ≈70 km depth in the northern, continental part of the subduction zone.

87Sr/86Sr dating and preliminary interpretation of magnetic susceptibility logs of giant piston cores from the Rio Grande Rise in the South Atlantic

NASA Astrophysics Data System (ADS)

Lacasse, Christian Michel; Santos, Roberto Ventura; Dantas, Elton Luiz; Vigneron, Quentin; de Sousa, Isabela Moreno Cordeiro; Harlamov, Vadim; Lisniowski, Maria Aline; Pessanha, Ivo Bruno Machado; Frazão, Eugênio Pires; Cavalcanti, José Adilson Dias

2017-12-01

Giant piston cores recovered from shallow depths (<1200 mbsl) on the northern flank of the Rio Grande Rise, bathed today in intermediate waters (AAIW, UCDW), have uncovered new stratigraphic and paleoceanographic aspects of the Plio-Pleistocene in the South Atlantic. Based on strontium isotope analysis of well-preserved foraminifera-rich sediment a stratigraphy was developed from lowess curve fitting of the data and an optimized matching with an internationally recognized timescale of 87Sr/86Sr seawater variation through geological times. Depth-to-age conversion of the magnetic susceptibility logs was implemented based on the identification of correlative peaks between cores and the developed 87Sr/86Sr age model. The influence of Northern Hemisphere glaciation is reflected in these new stratigraphic logs by a gradual increase from ∼2.7 Ma in the lower signal of magnetic susceptibility (below background level), to values approaching the arithmetic means, likely reflecting an overall increase in terrigenous input. The Rio Grande Rise cores have very low Plio-Pleistocene sedimentation rates (∼0.4-0.8 cm/ka), similar to gravity cores from the oligotrophic subtropical South Atlantic (below ∼2000 mbsl), and for which an inverse correlation between carbonate content and magnetic susceptibility was established. The coring depths on the Rio Grande Rise encompass strong gradients in oxygen concentration and other seawater parameters that define today's AAIW/UCDW transition. Depth-dependent variation in sedimentation rates since the onset of Northern Hemisphere glaciation coincides with the incursion of intermediate waters (UCDW, AAIW) in response to the overall reduction of NADW export to the Southern Ocean. Background levels of magnetic susceptibility in the cores suggest that this variation is mainly attributed to terrigenous input. The source region of this material has yet to be traced by considering in particular the mineral composition and paramagnetic properties of the detrital clays.

Deep-sea suprabenthos assemblages (Crustacea) off the Balearic Islands (western Mediterranean): Mesoscale variability in diversity and production

NASA Astrophysics Data System (ADS)

Cartes, J. E.; Mamouridis, V.; Fanelli, E.

2011-04-01

The composition of suprabenthic crustacean assemblages, their diversity, production (P) and production/biomass (P/B) ratios, were analyzed at species level along two transects situated to the north (N) and south (S) of Mallorca (Balearic Islands, western Mediterranean) at depths between 134 m and 760 m, based on a ca. bi-monthly sampling performed between August 2003 and June 2004. Differences with depth and season in assemblage composition and diversity were analyzed as a function of the contrasting environmental features (e.g. water mass dynamics) of the two areas. We identified 187 species (18 decapods, 5 euphausiids, 16 mysids, 76 gammaridean amphipods, 13 hyperiids, 1 caprellid, 21 isopods and 37 cumaceans). Substantial mesoscale variability in the deep-sea suprabenthic assemblages coupled with diversity trends between the N and S transects were found. Seasonality was the most important gradient influencing the dynamics of suprabenthos over the upper (350 m) and middle (650-750 m) slope in the N area. Conversely, the S area appeared to be more stable temporally with depth as the main gradient inducing assemblage differences. Different depth-related patterns were observed both for diversity and P/B. To the north diversity was very low at the shelf-break, increasing on the upper-slope ( H' > 3.00) and then decreasing again on the middle-slope. To the south diversity increased smoothly downward, reaching the highest values on the middle-slope. Regarding productivity, P/B was highest at intermediate depths to the north (over ca. 450-500 m), while to the south highest P/Bs were found deeper (over ca. 600-650 m). The higher P/B at intermediate depths found along N are likely due to higher % of organic matter (OM) in sediments, a product of oceanographic frontal systems. In particular, P/B was higher along N among omnivores and detritus feeders (e.g. Andaniexis mimonectes, Lepechinella manco and combined cumaceans), coupled to enriched OM in sediments, while along S mesoplanktonic carnivores ( Rhachotropis spp.) had higher P/Bs. We conclude that on the north slope the influence of frontal systems and more active flow dynamics of different water masses (WIW and LIW) increases natural disturbance in the area, increasing productivity and diversity of suprabenthic peracarids in the Benthic Boundary Layer. Also, species showed a displacement of their average distributions (their Centres of Gravity, CoG) to shallower depths along N, which is another indicator of more favorable habitat conditions for suprabenthos in the 400-500 m range at N.

Elongated Microcapsules and Their Formation

NASA Technical Reports Server (NTRS)

Calle, Luz M. (Inventor); Li, Wenyan N. (Inventor); Buhrow, Jerry W. (Inventor); Perusich, Stephen A. (Inventor); Jolley, Scott T. (Inventor); Gibson, Tracy L. (Inventor); Williams, Martha K. (Inventor)

2015-01-01

Elongated microcapsules, such as elongated hydrophobic-core and hydrophilic-core microcapsules, may be formed by pulse stirring an emulsion or shearing an emulsion between two surfaces moving at different velocities. The elongated microcapsules may be dispersed in a coating formulation, such as paint.

A Sticky Chain Model of the Elongation and Unfolding of Escherichia coli P Pili under Stress

PubMed Central

Andersson, Magnus; Fällman, Erik; Uhlin, Bernt Eric; Axner, Ove

2006-01-01

A model of the elongation of P pili expressed by uropathogenic Escherichia coli exposed to stress is presented. The model is based upon the sticky chain concept, which is based upon Hooke's law for elongation of the layer-to-layer and head-to-tail bonds between neighboring units in the PapA rod and a kinetic description of the opening and closing of bonds, described by rate equations and an energy landscape model. It provides an accurate description of the elongation behavior of P pili under stress and supports a hypothesis that the PapA rod shows all three basic stereotypes of elongation/unfolding: elongation of bonds in parallel, the zipper mode of unfolding, and elongation and unfolding of bonds in series. The two first elongation regions are dominated by a cooperative bond opening, in which each bond is influenced by its neighbor, whereas the third region can be described by individual bond opening, in which the bonds open and close randomly. A methodology for a swift extraction of model parameters from force-versus-elongation measurements performed under equilibrium conditions is derived. Entities such as the free energy, the stiffness, the elastic elongation, the opening length of the various bonds, and the number of PapA units in the rod are determined. PMID:16361334

A sticky chain model of the elongation and unfolding of Escherichia coli P pili under stress.

PubMed

Andersson, Magnus; Fällman, Erik; Uhlin, Bernt Eric; Axner, Ove

2006-03-01

A model of the elongation of P pili expressed by uropathogenic Escherichia coli exposed to stress is presented. The model is based upon the sticky chain concept, which is based upon Hooke's law for elongation of the layer-to-layer and head-to-tail bonds between neighboring units in the PapA rod and a kinetic description of the opening and closing of bonds, described by rate equations and an energy landscape model. It provides an accurate description of the elongation behavior of P pili under stress and supports a hypothesis that the PapA rod shows all three basic stereotypes of elongation/unfolding: elongation of bonds in parallel, the zipper mode of unfolding, and elongation and unfolding of bonds in series. The two first elongation regions are dominated by a cooperative bond opening, in which each bond is influenced by its neighbor, whereas the third region can be described by individual bond opening, in which the bonds open and close randomly. A methodology for a swift extraction of model parameters from force-versus-elongation measurements performed under equilibrium conditions is derived. Entities such as the free energy, the stiffness, the elastic elongation, the opening length of the various bonds, and the number of PapA units in the rod are determined.

Tritium in the western Mediterranean Sea during 1981 Phycemed cruise

NASA Astrophysics Data System (ADS)

Andrie, Chantal; Merlivat, Liliane

1988-02-01

We report on simultaneous hydrological and tritium data taken in the western Mediterranean Sea during April 1981 and which implement our knowledge of the spatial and temporal variability of the convection process occurring in the Northern Basin (Gulf of Lion, Ligurian Sea). The renewal time of the deep waters in the Medoc area is calculated to be 11 ± 2 years using a box-model assymption. An important local phenomenon of "cascading" off the Ebro River near the Spanish coast is, noticeable by the use of tritium data. In the Sardinia Straits area tritium data indicate very active mixing between 100 and 500 m depth. The tritium subsurface maxima in Sardinia Straits suggests the influence of not only the Levantine Intermediate Water (LIW) but also an important shallower component. In waters deeper than 500m, an active mixing occurs between the deep water and the LIW via an intermediate water mass from the Tyrrhenian Sea by "salt-fingering". Assuming a two end-member mixing. We determine the deep tritium content in the Sardinia Channel to be 1.8 TU. For comparison, the deep tritium content of the Northern Basin is equal to 1.3 TU. Tritium data relative to the Alboran Sea show that a layer of high tritium content persists all along its path from Sardifia to Gibraltar on a density surface shallower than the intermediate water. The homogeneity of the deep tritium concentrations between 1200 m depth and the bottom corroborate the upward "pumping" and westward circulation of deep waters along the continental slope of the North African Shelf. From the data measured in the Sardinia Straits and in the Alboran Sea, and upper limit of the deep advection rate of the order of 0.5 cm s-1 is estimated.

Faulting of natural serpentinite: Implications for intermediate-depth seismicity

DOE Office of Scientific and Technical Information (OSTI.GOV)

Gasc, Julien; Hilairet, Nadège; Yu, Tony

The seismic potential of serpentinites at high pressure was investigated via deformation experiments on cored natural serpentinite samples, during which micro-seismicity was monitored by recording Acoustic Emissions (AEs). Deformation was performed at pressures of 3–5 GPa, using a Deformation-DIA device, and over a wide range of temperatures, both within and outside antigorite's stability field. Below 400 °C, serpentinite deformation involves “silent” semi-brittle mechanisms, even in cases where strain localization is observed. At high temperature (i.e., above 600 °C), despite conditions propitious to dehydration embrittlement (i.e., fast strain rates and reaction kinetics), joint deformation and dehydration lead to ductile shear, withoutmore » generation of AEs. Brittle behavior was observed in a narrow temperature window ca. 500 °C. In this latter case, AEs are consistently observed upon faulting and extremely sharp strain localization is observed in recovered samples. The resulting microstructures are consistent with the inverse ductile-to-brittle transition proposed by Proctor and Hirth (2016) in antigorite. This may therefore be a source of seismicity in subducting slabs at mantle pressures and temperatures from 500 to 600 °C. However, the acoustic signal observed here is orders of magnitude weaker than what is obtained at low PT conditions with brittle failure, consistently with low radiation efficiency of serpentinite faulting (Prieto et al., 2013) and suggests that other mechanisms are responsible for large intermediate-depth earthquakes. In fact, the present results are in line with a recent study (Ferrand et al., 2017), that suggests that intermediate earthquakes are likely induced by mechanical instabilities due to dehydration in partly hydrated peridotites.« less

Understanding variability of the Southern Ocean overturning circulation in CORE-II models

NASA Astrophysics Data System (ADS)

Downes, S. M.; Spence, P.; Hogg, A. M.

2018-03-01

The current generation of climate models exhibit a large spread in the steady-state and projected Southern Ocean upper and lower overturning circulation, with mechanisms for deep ocean variability remaining less well understood. Here, common Southern Ocean metrics in twelve models from the Coordinated Ocean-ice Reference Experiment Phase II (CORE-II) are assessed over a 60 year period. Specifically, stratification, surface buoyancy fluxes, and eddies are linked to the magnitude of the strengthening trend in the upper overturning circulation, and a decreasing trend in the lower overturning circulation across the CORE-II models. The models evolve similarly in the upper 1 km and the deep ocean, with an almost equivalent poleward intensification trend in the Southern Hemisphere westerly winds. However, the models differ substantially in their eddy parameterisation and surface buoyancy fluxes. In general, models with a larger heat-driven water mass transformation where deep waters upwell at the surface ( ∼ 55°S) transport warmer waters into intermediate depths, thus weakening the stratification in the upper 2 km. Models with a weak eddy induced overturning and a warm bias in the intermediate waters are more likely to exhibit larger increases in the upper overturning circulation, and more significant weakening of the lower overturning circulation. We find the opposite holds for a cool model bias in intermediate depths, combined with a more complex 3D eddy parameterisation that acts to reduce isopycnal slope. In summary, the Southern Ocean overturning circulation decadal trends in the coarse resolution CORE-II models are governed by biases in surface buoyancy fluxes and the ocean density field, and the configuration of the eddy parameterisation.

The miRNA Transcriptome Directly Reflects the Physiological and Biochemical Differences between Red, White, and Intermediate Muscle Fiber Types.

PubMed

Ma, Jideng; Wang, Hongmei; Liu, Rui; Jin, Long; Tang, Qianzi; Wang, Xun; Jiang, Anan; Hu, Yaodong; Li, Zongwen; Zhu, Li; Li, Ruiqiang; Li, Mingzhou; Li, Xuewei

2015-04-29

MicroRNAs (miRNAs) are small non-coding RNAs that can regulate their target genes at the post-transcriptional level. Skeletal muscle comprises different fiber types that can be broadly classified as red, intermediate, and white. Recently, a set of miRNAs was found expressed in a fiber type-specific manner in red and white fiber types. However, an in-depth analysis of the miRNA transcriptome differences between all three fiber types has not been undertaken. Herein, we collected 15 porcine skeletal muscles from different anatomical locations, which were then clearly divided into red, white, and intermediate fiber type based on the ratios of myosin heavy chain isoforms. We further illustrated that three muscles, which typically represented each muscle fiber type (i.e., red: peroneal longus (PL), intermediate: psoas major muscle (PMM), white: longissimus dorsi muscle (LDM)), have distinct metabolic patterns of mitochondrial and glycolytic enzyme levels. Furthermore, we constructed small RNA libraries for PL, PMM, and LDM using a deep sequencing approach. Results showed that the differentially expressed miRNAs were mainly enriched in PL and played a vital role in myogenesis and energy metabolism. Overall, this comprehensive analysis will contribute to a better understanding of the miRNA regulatory mechanism that achieves the phenotypic diversity of skeletal muscles.

Defining the natural fracture network in a shale gas play and its cover succession: The case of the Utica Shale in eastern Canada

NASA Astrophysics Data System (ADS)

Ladevèze, P.; Séjourné, S.; Rivard, C.; Lavoie, D.; Lefebvre, R.; Rouleau, A.

2018-03-01

In the St. Lawrence sedimentary platform (eastern Canada), very little data are available between shallow fresh water aquifers and deep geological hydrocarbon reservoir units (here referred to as the intermediate zone). Characterization of this intermediate zone is crucial, as the latter controls aquifer vulnerability to operations carried out at depth. In this paper, the natural fracture networks in shallow aquifers and in the Utica shale gas reservoir are documented in an attempt to indirectly characterize the intermediate zone. This study used structural data from outcrops, shallow observation well logs and deep shale gas well logs to propose a conceptual model of the natural fracture network. Shallow and deep fractures were categorized into three sets of steeply-dipping fractures and into a set of bedding-parallel fractures. Some lithological and structural controls on fracture distribution were identified. The regional geologic history and similarities between the shallow and deep fracture datasets allowed the extrapolation of the fracture network characterization to the intermediate zone. This study thus highlights the benefits of using both datasets simultaneously, while they are generally interpreted separately. Recommendations are also proposed for future environmental assessment studies in which the existence of preferential flow pathways and potential upward fluid migration toward shallow aquifers need to be identified.

[Effects of combined pollution of lead and benzo[a] pyrene on seed growth of wheat in soils].

PubMed

Wang, Hong-Qi; Wang, Shuai; Ning, Shao-Wei; Sun, Yan-Ling; Hou, Ze-Qing

2011-03-01

Seed germination, root elongation, shoot elongation and ratio of shoot to root of wheat in soils polluted by lead (Pb) and benzo (a)pyrene (B[a] P) with medium-low concentrations were studied to reveal the ecological effects of combined pollution and screen the indicative markers. Results indicated that seed germination was not sensitive to single or combined pollution of Pb or B[a] P. Root elongation was inhibited by single pollution of Pb or B[a]P to different extents. Extensive interactions between Pb and B[a]P occurred to root elongation of wheat, including synergistic-stimulatory effect and antagonistic-inhibitory effect. The joint action was mainly antagonistic. Single pollution of B [a] P had an inhibitory effect on shoot elongation. Under combined pollution conditions, the shoot elongation of wheat correlated well with Pb contents (p < 0.01). B[a] P or the interactions between pollutants had little effect on shoot elongation of wheat. The joint action on shoot elongation was consistently antagonistic. The response pattern of the ratio of shoot to root was similar to the response pattern of shoot elongation. However, the former had better correlation than the latter, indicating it as a more suitable indicative marker for Pb pollution. If lead acetate was employed instead of lead nitrate, longer root elongation, shorter shoot elongation and no effect on ratio of shoot to root were found. Therefore, the forms of Pb salt had significant influence on seed growth of wheat in soils.

Effect of Thermomechanical Processing on Microstructure, Texture Evolution, and Mechanical Properties of Al-Mg-Si-Cu Alloys with Different Zn Contents

NASA Astrophysics Data System (ADS)

Wang, X. F.; Guo, M. X.; Chen, Y.; Zhu, J.; Zhang, J. S.; Zhuang, L. Z.

2017-07-01

The effect of thermomechanical processing on microstructure, texture evolution, and mechanical properties of Al-Mg-Si-Cu alloys with different Zn contents was studied by mechanical properties, microstructure, and texture characterization in the present study. The results show that thermomechanical processing has a significant influence on the evolution of microstructure and texture and on the final mechanical properties, independently of Zn contents. Compared with the T4P-treated (first preaged at 353 K (80 °C) for 12 hours and then naturally aged for 14 days) sheets with high final cold rolling reduction, the T4P-treated sheets with low final cold rolling reduction possess almost identical strength and elongation and higher average r values. Compared with the intermediate annealed sheets with high final cold rolling reduction, the intermediate annealed sheets with low final cold rolling reduction contain a higher number of particles with a smaller size. After solution treatment, in contrast to the sheets with high final cold rolling reduction, the sheets with low final cold rolling reduction possess finer grain structure and tend to form a weaker recrystallization texture. The recrystallization texture may be affected by particle distribution, grain size, and final cold rolling texture. Finally, the visco-plastic self-consistent (VPSC) model was used to predict r values.

Continuous cooling transformations and microstructures in a low-carbon, high-strength low-alloy plate steel

NASA Astrophysics Data System (ADS)

Thompson, S. W.; Vin, D. J., Col; Krauss, G.

1990-06-01

A continuous-cooling-transformation (CCT) diagram was determined for a high-strength low-alloy plate steel containing (in weight percent) 0.06 C, 1.45 Mn, 1.25 Cu, 0.97 Ni, 0.72 Cr, and 0.42 Mo. Dilatometric measurements were supplemented by microhardness testing, light microscopy, and transmission electron microscopy. The CCT diagram showed significant suppression of polygonal ferrite formation and a prominent transformation region, normally attributed to bainite formation, at temperatures intermediate to those of polygonal ferrite and martensite formation. In the intermediate region, ferrite formation in groups of similarly oriented crystals about 1 μm in size and containing a high density of dislocations dominated the transformation of austenite during continuous cooling. The ferrite grains assumed two morphologies, elongated or acicular and equiaxed or granular, leading to the terms “acicular ferrite” and “granular ferrite,” respectively, to describe these structures. Austenite regions, some transformed to martensite, were enriched in carbon and retained at interfaces between ferrite grains. Coarse interfacial ledges and the nonacicular morphology of the granular ferrite grains provided evidence for a phase transformation mechanism involving reconstructive diffusion of substitutional atoms. At slow cooling rates, polygonal ferrite and Widmanstätten ferrite formed. These latter structures contained low dislocation densities and e-copper precipitates formed by an interphase transformation mechanism.

Visualization of two transfer RNAs trapped in transit during elongation factor G-mediated translocation

PubMed Central

Ramrath, David J. F.; Lancaster, Laura; Sprink, Thiemo; Mielke, Thorsten; Loerke, Justus; Noller, Harry F.; Spahn, Christian M. T.

2013-01-01

During protein synthesis, coupled translocation of messenger RNAs (mRNA) and transfer RNAs (tRNA) through the ribosome takes place following formation of each peptide bond. The reaction is facilitated by large-scale conformational changes within the ribosomal complex and catalyzed by elongtion factor G (EF-G). Previous structural analysis of the interaction of EF-G with the ribosome used either model complexes containing no tRNA or only a single tRNA, or complexes where EF-G was directly bound to ribosomes in the posttranslocational state. Here, we present a multiparticle cryo-EM reconstruction of a translocation intermediate containing two tRNAs trapped in transit, bound in chimeric intrasubunit ap/P and pe/E hybrid states. The downstream ap/P-tRNA is contacted by domain IV of EF-G and P-site elements within the 30S subunit body, whereas the upstream pe/E-tRNA maintains tight interactions with P-site elements of the swiveled 30S head. Remarkably, a tight compaction of the tRNA pair can be seen in this state. The translocational intermediate presented here represents a previously missing link in understanding the mechanism of translocation, revealing that the ribosome uses two distinct molecular ratchets, involving both intra- and intersubunit rotational movements, to drive the synchronous movement of tRNAs and mRNA. PMID:24324168

Checkpoint kinase 1-induced phosphorylation of O-linked β-N-acetylglucosamine transferase regulates the intermediate filament network during cytokinesis.

PubMed

Li, Zhe; Li, Xueyan; Nai, Shanshan; Geng, Qizhi; Liao, Ji; Xu, Xingzhi; Li, Jing

2017-12-01

Checkpoint kinase 1 (Chk1) is a kinase instrumental for orchestrating DNA replication, DNA damage checkpoints, the spindle assembly checkpoint, and cytokinesis. Despite Chk1's pivotal role in multiple cellular processes, many of its substrates remain elusive. Here, we identified O- linked β- N -acetylglucosamine ( O -GlcNAc)-transferase (OGT) as one of Chk1's substrates. We found that Chk1 interacts with and phosphorylates OGT at Ser-20, which not only stabilizes OGT, but also is required for cytokinesis. Phospho-specific antibodies of OGT-pSer-20 exhibited specific signals at the midbody of the cell, consistent with midbody localization of OGT as reported previously. Moreover, phospho-deficient OGT (S20A) cells attenuated cellular O -GlcNAcylation levels and also reduced phosphorylation of Ser-71 in the cytoskeletal protein vimentin, a modification critical for severing vimentin filament during cytokinesis. Consequently, elongated vimentin bridges were observed in cells depleted of OGT via an si OGT- based approach. Lastly, expression of plasmids resistant to si OGT efficiently rescued the vimentin bridge phenotype, but the OGT-S20A rescue plasmids did not. Our results suggest a Chk1-OGT-vimentin pathway that regulates the intermediate filament network during cytokinesis. © 2017 by The American Society for Biochemistry and Molecular Biology, Inc.

Formant-Frequency Variation and Informational Masking of Speech by Extraneous Formants: Evidence Against Dynamic and Speech-Specific Acoustical Constraints

PubMed Central

2014-01-01

How speech is separated perceptually from other speech remains poorly understood. Recent research indicates that the ability of an extraneous formant to impair intelligibility depends on the variation of its frequency contour. This study explored the effects of manipulating the depth and pattern of that variation. Three formants (F1+F2+F3) constituting synthetic analogues of natural sentences were distributed across the 2 ears, together with a competitor for F2 (F2C) that listeners must reject to optimize recognition (left = F1+F2C; right = F2+F3). The frequency contours of F1 − F3 were each scaled to 50% of their natural depth, with little effect on intelligibility. Competitors were created either by inverting the frequency contour of F2 about its geometric mean (a plausibly speech-like pattern) or using a regular and arbitrary frequency contour (triangle wave, not plausibly speech-like) matched to the average rate and depth of variation for the inverted F2C. Adding a competitor typically reduced intelligibility; this reduction depended on the depth of F2C variation, being greatest for 100%-depth, intermediate for 50%-depth, and least for 0%-depth (constant) F2Cs. This suggests that competitor impact depends on overall depth of frequency variation, not depth relative to that for the target formants. The absence of tuning (i.e., no minimum in intelligibility for the 50% case) suggests that the ability to reject an extraneous formant does not depend on similarity in the depth of formant-frequency variation. Furthermore, triangle-wave competitors were as effective as their more speech-like counterparts, suggesting that the selection of formants from the ensemble also does not depend on speech-specific constraints. PMID:24842068

The Role of Word Recognition, Oral Reading Fluency and Listening Comprehension in the Simple View of Reading: A Study in an Intermediate Depth Orthography

ERIC Educational Resources Information Center

Cadime, Irene; Rodrigues, Bruna; Santos, Sandra; Viana, Fernanda Leopoldina; Chaves-Sousa, Séli; do Céu Cosme, Maria; Ribeiro, Iolanda

2017-01-01

Empirical research has provided evidence for the simple view of reading across a variety of orthographies, but the role of oral reading fluency in the model is unclear. Moreover, the relative weight of listening comprehension, oral reading fluency and word recognition in reading comprehension seems to vary across orthographies and schooling years.…

Intense Mixing and Recirculations of Intermediate and Deep Water in the Northwest Argentine Basin

NASA Astrophysics Data System (ADS)

Valla, D.; Piola, A. R.

2016-02-01

The sources of the South Atlantic upper and intermediate waters that form the upper layer flow needed to maintain mass balance due the export of North Atlantic Deep Water from the North Atlantic are still under debate. The "cold path" scheme postulates that intermediate waters are injected into the South Atlantic from the Pacific through the Drake Passage, advected north by the Malvinas Current up to the Brazil/Malvinas Confluence (BMC) and circulated around the basin following the path of the subtropical gyre. We report high-quality hydrographic observations collected in the South Atlantic western boundary at 34.5 °S during 7 hydrographic cruises as part of the SAMOC project. We focus on the flow and characteristics of Antarctic Intermediate Water (AAIW) and Upper Circumpolar Deep Water (UCDW). The water mass analysis indicates the presence of "young" (fresh and highly oxygenated) varieties of AAIW (S<34.2, O2>6 ml·l-1) which must be derived from south of the SAMOC array. This suggests an alternative pathway for intermediate waters that involves a short circuit beneath the BMC. Simultaneous full-depth velocity measurements using lowered acoustic Doppler current profilers confirm this hypothesis. The flow direction across the SAMOC array in the UCDW range inferred from dissolved oxygen measurements also indicate the presence of UCDW (O2<4.2 ml·l-1) derived from farther south. However, the wider range of oxygen concentrations suggests strong recirculations of both water masses within the northwestern Argentine Basin.

Mechanical behaviour of the lithosphere beneath the Adamawa uplift (Cameroon, West Africa) based on gravity data

NASA Astrophysics Data System (ADS)

Poudjom Djomani, Y. H.; Diament, M.; Albouy, Y.

1992-07-01

The Adamawa massif in Central Cameroon is one of the African domal uplifts of volcanic origin. It is an elongated feature, 200 km wide. The gravity anomalies over the Adamawa uplift were studied to determine the mechanical behaviour of the lithosphere. Two approaches were used to analyse six gravity profiles that are 600 km long and that run perpendicular to the Adamawa trend. Firstly, the coherence function between topography and gravity was interpreted; secondly, source depth estimations by spectral analysis of the gravity data was performed. To get significant information for the interpretation of the experimental coherence function, the length of the profiles was varied from 320 km to 600 km. This treatment allows one to obtain numerical estimates of the coherence function. The coherence function analysis points out that the lithosphere is deflected and thin beneath the Adamawa uplift, and the Effective Elastic Thickness is of about 20 km. To fit the coherence, a load from below needs to be taken into account. This result on the Adamawa massif is of the same order of magnitude as those obtained on other African uplifts such as Hoggar, Darfur and Kenya domes. For the depth estimation, three major density contrasts were found: the shallowest depth (4-15 km) can be correlated to shear zone structures and the associated sedimentary basins beneath the uplift; the second density contrast (18-38 km) corresponds to the Moho; and finally, the last depth (70-90 km) would be the top of the upper mantle and demotes the low density zone beneath the Adamawa uplift.

Integrating aeromagnetic and Landsat™ 8 data into subsurface structural mapping of Precambrian basement complex

NASA Astrophysics Data System (ADS)

Kayode, John Stephen; Nawawi, M. N. M.; Abdullah, Khiruddin B.; Khalil, Amin E.

2017-01-01

The integration of Aeromagnetic data and remotely sensed imagery with the intents of mapping the subsurface geological structures in part of the South-western basement complex of Nigeria was developed using the PCI Geomatica Software. 2013. The data obtained from the Nigerian Geological Survey Agency; was corrected using Regional Residual Separation of the Total Magnetic field anomalies enhanced, and International Geomagnetic Reference Field removed. The principal objective of this study is, therefore, to introduce a rapid and efficient method of subsurface structural depth estimate and structural index evaluation through the incorporation of the Euler Deconvolution technique into PCI Geomatica 2013 to prospect for subsurface geological structures. The shape and depth of burial helped to define these structures from the regional aeromagnetic map. The method enabled various structural indices to be automatically delineated for an index of between 0.5 SI and 3.0 SI at a maximum depth of 1.1 km that clearly showed the best depths estimate for all the structural indices. The results delineate two major magnetic belts in the area; the first belt shows an elongated ridge-like structure trending mostly along the NorthNortheast-SouthSouthwest and the other anomalies trends primarily in the Northeast, Northwest, Northeast-Southwest parts of the study area that could be attributed to basement complex granitic intrusions from the tectonic history of the area. The majority of the second structures showed various linear structures different from the first structure. Basically, a significant offset was delineated at the core segment of the study area, suggesting a major subsurface geological feature that controls mineralisation in this area.

Paleoenvironmental events during the last 13,000 years in the central Red Sea as recorded by pteropoda

NASA Astrophysics Data System (ADS)

Almogi-Labin, Ahuva; Hemleben, Christoph; Meischner, Dieter; Erlenkeuser, Helmut

1991-02-01

A high-resolution record was obtained by investigating a sedimentary sequence from two cores taken in the central Red Sea (R/V Meteor cruise 5, leg 2). The numerical variations between nonmigratory and migratory pteropods and their stable isotopic record were studied together with variations in the carbonate and total organic carbon content in order to estimate changes in the structure of the water column during the last 13 kyr. The results indicate the existence of a highly stratified water column during deglaciation and early Holocene (13-8.5 ka). During this period the depth of the mixed layer varied between less than 50-100 m at most, and productivity was markedly reduced in comparison to the recent situation. The intermediate and deep water were constantly highly depleted in oxygen. A pronounced Younger Dryas event was recognized at 10.4 ka which coincides with an arid phase on the border land. The oxygenation of the intermediate water improved remarkably after 7.5 ka and peaked during the period between 4.6 and 2.0 ka. During this period the mixed layer reached its present depth and the productivity which was maximal during middle Holocene attained present level during the last 4.6 kyr.

Spatial patterns of mixing in the Solomon Sea

NASA Astrophysics Data System (ADS)

Alberty, M. S.; Sprintall, J.; MacKinnon, J.; Ganachaud, A.; Cravatte, S.; Eldin, G.; Germineaud, C.; Melet, A.

2017-05-01

The Solomon Sea is a marginal sea in the southwest Pacific that connects subtropical and equatorial circulation, constricting transport of South Pacific Subtropical Mode Water and Antarctic Intermediate Water through its deep, narrow channels. Marginal sea topography inhibits internal waves from propagating out and into the open ocean, making these regions hot spots for energy dissipation and mixing. Data from two hydrographic cruises and from Argo profiles are employed to indirectly infer mixing from observations for the first time in the Solomon Sea. Thorpe and finescale methods indirectly estimate the rate of dissipation of kinetic energy (ɛ) and indicate that it is maximum in the surface and thermocline layers and decreases by 2-3 orders of magnitude by 2000 m depth. Estimates of diapycnal diffusivity from the observations and a simple diffusive model agree in magnitude but have different depth structures, likely reflecting the combined influence of both diapycnal mixing and isopycnal stirring. Spatial variability of ɛ is large, spanning at least 2 orders of magnitude within isopycnal layers. Seasonal variability of ɛ reflects regional monsoonal changes in large-scale oceanic and atmospheric conditions with ɛ increased in July and decreased in March. Finally, tide power input and topographic roughness are well correlated with mean spatial patterns of mixing within intermediate and deep isopycnals but are not clearly correlated with thermocline mixing patterns.

Array design considerations for exploitation of stable weakly dispersive modal pulses in the deep ocean

NASA Astrophysics Data System (ADS)

Udovydchenkov, Ilya A.

2017-07-01

Modal pulses are broadband contributions to an acoustic wave field with fixed mode number. Stable weakly dispersive modal pulses (SWDMPs) are special modal pulses that are characterized by weak dispersion and weak scattering-induced broadening and are thus suitable for communications applications. This paper investigates, using numerical simulations, receiver array requirements for recovering information carried by SWDMPs under various signal-to-noise ratio conditions without performing channel equalization. Two groups of weakly dispersive modal pulses are common in typical mid-latitude deep ocean environments: the lowest order modes (typically modes 1-3 at 75 Hz), and intermediate order modes whose waveguide invariant is near-zero (often around mode 20 at 75 Hz). Information loss is quantified by the bit error rate (BER) of a recovered binary phase-coded signal. With fixed receiver depths, low BERs (less than 1%) are achieved at ranges up to 400 km with three hydrophones for mode 1 with 90% probability and with 34 hydrophones for mode 20 with 80% probability. With optimal receiver depths, depending on propagation range, only a few, sometimes only two, hydrophones are often sufficient for low BERs, even with intermediate mode numbers. Full modal resolution is unnecessary to achieve low BERs. Thus, a flexible receiver array of autonomous vehicles can outperform a cabled array.

Dehydration of lawsonite could directly trigger earthquakes in subducting oceanic crust

NASA Astrophysics Data System (ADS)

Okazaki, Keishi; Hirth, Greg

2016-02-01

Intermediate-depth earthquakes in cold subduction zones are observed within the subducting oceanic crust, as well as the mantle. In contrast, intermediate-depth earthquakes in hot subduction zones predominantly occur just below the Mohorovičić discontinuity. These observations have stimulated interest in relationships between blueschist-facies metamorphism and seismicity, particularly through dehydration reactions involving the mineral lawsonite. Here we conducted deformation experiments on lawsonite, while monitoring acoustic emissions, in a Griggs-type deformation apparatus. The temperature was increased above the thermal stability of lawsonite, while the sample was deforming, to test whether the lawsonite dehydration reaction induces unstable fault slip. In contrast to similar tests on antigorite, unstable fault slip (that is, stick-slip) occurred during dehydration reactions in the lawsonite and acoustic emission signals were continuously observed. Microstructural observations indicate that strain is highly localized along the fault (R1 and B shears), and that the fault surface develops slickensides (very smooth fault surfaces polished by frictional sliding). The unloading slope during the unstable slip follows the stiffness of the apparatus at all experimental conditions, regardless of the strain rate and temperature ramping rate. A thermomechanical scaling factor for the experiments is within the range estimated for natural subduction zones, indicating the potential for unstable frictional sliding within natural lawsonite layers.

Effect of planar cuts' orientation on the perceived surface layout and object's shape.

PubMed

Bocheva, Nadejda

2009-07-01

The effect of the orientation of the cutting planes producing planar curves over the surface of an object on its perceived pose and shape was investigated for line drawings representing three-dimensional objects. The results suggest that the orientational flow produced by the surface curves introduces an apparent object rotation in depth and in the image plane and changes in its perceived elongation. The apparent location of the nearest points is determined by the points of maximal view-dependent unsigned curvature of the surface curves. The data are discussed in relation to the interaction of the shape-from-silhouette system and shape-from-contour system and its effect on the interpretation of the surface contours with respect to the surface geometry.

Indications of proton-dominated cosmic-ray composition above 1.6 EeV.

PubMed

Abbasi, R U; Abu-Zayyad, T; Al-Seady, M; Allen, M; Amman, J F; Anderson, R J; Archbold, G; Belov, K; Belz, J W; Bergman, D R; Blake, S A; Brusova, O A; Burt, G W; Cannon, C; Cao, Z; Deng, W; Fedorova, Y; Finley, C B; Gray, R C; Hanlon, W F; Hoffman, C M; Holzscheiter, M H; Ivanov, D; Hughes, G; Hüntemeyer, P; Ivanov, D; Jones, B F; Jui, C C H; Kim, K; Kirn, M A; Loh, E C; Liu, J; Lundquist, J P; Maestas, M M; Manago, N; Marek, L J; Martens, K; Matthews, J A J; Matthews, J N; Moore, S A; O'Neill, A; Painter, C A; Perera, L; Reil, K; Riehle, R; Roberts, M; Rodriguez, D; Sasaki, N; Schnetzer, S R; Scott, L M; Sinnis, G; Smith, J D; Sokolsky, P; Song, C; Springer, R W; Stokes, B T; Stratton, S; Thomas, S B; Thomas, J R; Thomson, G B; Tupa, D; Zech, A; Zhang, X

2010-04-23

We report studies of ultrahigh-energy cosmic-ray composition via analysis of depth of air shower maximum (X(max)), for air shower events collected by the High-Resolution Fly's Eye (HiRes) observatory. The HiRes data are consistent with a constant elongation rate d/d[log(E)] of 47.9+/-6.0(stat)+/-3.2(syst) g/cm2/decade for energies between 1.6 and 63 EeV, and are consistent with a predominantly protonic composition of cosmic rays when interpreted via the QGSJET01 and QGSJET-II high-energy hadronic interaction models. These measurements constrain models in which the galactic-to-extragalactic transition is the cause of the energy spectrum ankle at 4x10(18) eV.

HIV-1 Tat protein promotes formation of more-processive elongation complexes.

PubMed Central

Marciniak, R A; Sharp, P A

1991-01-01

The Tat protein of HIV-1 trans-activates transcription in vitro in a cell-free extract of HeLa nuclei. Quantitative analysis of the efficiency of elongation revealed that a majority of the elongation complexes generated by the HIV-1 promoter were not highly processive and terminated within the first 500 nucleotides. Tat trans-activation of transcription from the HIV-1 promoter resulted from an increase in processive character of the elongation complexes. More specifically, the analysis suggests that there exist two classes of elongation complexes initiating from the HIV promoter: a less-processive form and a more-processive form. Addition of purified Tat protein was found to increase the abundance of the more-processive class of elongation complex. The purine nucleoside analog, 5,6-dichloro-1-beta-D-ribofuranosylbenzimidazole (DRB) inhibits transcription in this reaction by decreasing the efficiency of elongation. Surprisingly, stimulation of transcription elongation by Tat was preferentially inhibited by the addition of DRB. Images PMID:1756726

Gravity interpretation to image the geologic structures of the coastal zone in Al Qunfudhah area, southwest Saudi Arabia

NASA Astrophysics Data System (ADS)

Sulaiman, Aseem; Elawadi, Eslam; Mogren, Saad

2018-06-01

This study provides interpretation and modeling of gravity survey data to map the subsurface basement relief and controlling structures of a coastal area in the southwestern part of Saudi Arabia as an aid to groundwater potential assessment. The gravity survey data were filtered and analyzed using different edge detection and depth estimation techniques and concluded by 2-D modeling conducted along representative profiles to obtain the topography and depth variations of the basement surface in the area. The basement rocks are exposed in the eastern part of the area but dip westward beneath a sedimentary cover to depths of up to 2200 m in the west, while showing repeated topographic expressions related to a tilted fault-block structure that is dominant in the Red Sea rift zone. Two fault systems were recognized in the area. The first is a normal fault system trending in the NNW-SSE direction that is related to the Red Sea rift, and the second is a cross-cutting oblique fault system trending in the NE-SW direction. The interaction between these two fault systems resulted in the formation of a set of closed basins elongated in the NNW-SSE direction and terminated by the NE-SW fault system. The geomorphology and sedimentary sequences of these basins qualify them as potential regions of groundwater accumulation.

Identification of genes involved in the ACC-mediated control of root cell elongation in Arabidopsis thaliana

PubMed Central

2012-01-01

Background Along the root axis of Arabidopsis thaliana, cells pass through different developmental stages. In the apical meristem repeated cycles of division increase the numbers of cells. Upon leaving the meristem, these cells pass the transition zone where they are physiologically and mechanically prepared to undergo subsequent rapid elongation. During the process of elongation epidermal cells increase their length by 300% in a couple of hours. When elongation ceases, the cells acquire their final size, shape and functions (in the differentiation zone). Ethylene administered as its precursor 1-aminocyclopropane-1-carboxylic acid (ACC) is capable of inhibiting elongation in a concentration-dependent way. Using a microarray analysis, genes and/or processes involved in this elongation arrest are identified. Results Using a CATMA-microarray analysis performed on control and 3h ACC-treated roots, 240 differentially expressed genes were identified. Quantitative Real-Time RT-PCR analysis of the 10 most up and down regulated genes combined with literature search confirmed the accurateness of the analysis. This revealed that inhibition of cell elongation is, at least partly, caused by restricting the events that under normal growth conditions initiate elongation and by increasing the processes that normally stop cellular elongation at the end of the elongation/onset of differentiation zone. Conclusions ACC interferes with cell elongation in the Arabidopsis thaliana roots by inhibiting cells from entering the elongation process and by immediately stimulating the formation of cross-links in cell wall components, diminishing the remaining elongation capacity. From the analysis of the differentially expressed genes, it becomes clear that many genes identified in this response, are also involved in several other kind of stress responses. This suggests that many responses originate from individual elicitors, but that somewhere in the downstream signaling cascade, these are converged to a ’common pathway’. Furthermore, several potential keyplayers, such as transcription factors and auxin-responsive genes, were identified by the microarray analysis. They await further analysis to reveal their exact role in the control of cell elongation. PMID:23134674

Portable Catapult Launcher For Small Aircraft

NASA Technical Reports Server (NTRS)

Rosenbaum, Bernard J. (Inventor); Petter, George E. (Inventor); Gessler, Joseph A. (Inventor); Hughes, Michael G. (Inventor)

2005-01-01

An apparatus for launching an aircraft having a multiplicity of interconnected elongated tracks of rigid material forming a track system and wherein each elongated track has a predetermined elongated track cross-sectional design, a winch system connected to the track system wherein the winch system has a variable mechanical advantage, one or more elongated elastic members wherein one end of each of the one or more elongated elastic members is adjustably connected to the track system, and a carrier slidably mounted to the track system wherein the canier is connected to the winch system and to the other end of each of the one or more elongated elastic members.

Portable catapult launcher for small aircraft

NASA Technical Reports Server (NTRS)

Rosenbaum, Bernard J. (Inventor); Petter, George E. (Inventor); Gessler, Joseph A. (Inventor); Hughes, Michael G. (Inventor)

2005-01-01

An apparatus for launching an aircraft having a multiplicity of interconnected elongated tracks of rigid material forming a track system and wherein each elongated track has a predetermined elongated track cross-sectional design, a winch system connected to the track system wherein the winch system has a variable mechanical advantage, one or more elongated elastic members wherein one end of each of the one or more elongated elastic members is adjustably connected to the track system, and a carrier slidably mounted to the track system wherein the carrier is connected to the winch system and to the other end of each of the one or more elongated elastic members.

Halogenated auxins affect microtubules and root elongation in Lactuca sativa

NASA Technical Reports Server (NTRS)

Zhang, N.; Hasenstein, K. H.

2000-01-01

We studied the effect of 4,4,4-trifluoro-3-(indole-3-)butyric acid (TFIBA), a recently described root growth stimulator, and 5,6-dichloro-indole-3-acetic acid (DCIAA) on growth and microtubule (MT) organization in roots of Lactuca sativa L. DCIAA and indole-3-butyric acid (IBA) inhibited root elongation and depolymerized MTs in the cortex of the elongation zone, inhibited the elongation of stele cells, and promoted xylem maturation. Both auxins caused the plane of cell division to shift from anticlinal to periclinal. In contrast, TFIBA (100 micromolar) promoted elongation of primary roots by 40% and stimulated the elongation of lateral roots, even in the presence of IBA, the microtubular inhibitors oryzalin and taxol, or the auxin transport inhibitor naphthylphthalamic acid. However, TFIBA inhibited the formation of lateral root primordia. Immunostaining showed that TFIBA stabilized MTs orientation perpendicular to the root axis, doubled the cortical cell length, but delayed xylem maturation. The data indicate that the auxin-induced inhibition of elongation and swelling of roots results from reoriented phragmoplasts, the destabilization of MTs in elongating cells, and promotion of vessel formation. In contrast, TFIBA induced promotion of root elongation by enhancing cell length, prolonging transverse MT orientation, delaying cell and xylem maturation.

The Elongation of Ovococci

PubMed Central

Philippe, Jules; Vernet, Thierry

2014-01-01

The morphogenesis of ovococci has been reviewed extensively. Recent results have provided new insights concerning the mechanisms of elongation in ovoid bacteria. We present here the proteins involved in the elongation (firmly established and more or less hypothetical) and discuss the relationship between elongation and division of ovococci. PMID:24773288

Circumstellar Dust in Symbiotic Novae

NASA Astrophysics Data System (ADS)

Jurkic, T.; Kotnik-Karuza, D.

2015-12-01

We present a model of inner dust regions around the cool Mira component of the two symbiotic novae, RR Tel and HM Sge, based on the near-IR photometry, ISO spectra and mid-IR interferometry. The dust properties were determined using the DUSTY code. A compact circumstellar silicate dust shell with inner dust shell temperatures between 900 K and 1300 K and of moderate optical depth can explain all the observations. RR Tel shows the presence of an equatorially enhanced dust density during minimum obscuration. Obscuration events are explained by an increase in optical depth caused by the newly condensed dust. The mass loss rates are significantly higher than in intermediate-period single Miras but in agreement with longer-period O-rich AGB stars.

Analysis of view synthesis prediction architectures in modern coding standards

NASA Astrophysics Data System (ADS)

Tian, Dong; Zou, Feng; Lee, Chris; Vetro, Anthony; Sun, Huifang

2013-09-01

Depth-based 3D formats are currently being developed as extensions to both AVC and HEVC standards. The availability of depth information facilitates the generation of intermediate views for advanced 3D applications and displays, and also enables more efficient coding of the multiview input data through view synthesis prediction techniques. This paper outlines several approaches that have been explored to realize view synthesis prediction in modern video coding standards such as AVC and HEVC. The benefits and drawbacks of various architectures are analyzed in terms of performance, complexity, and other design considerations. It is hence concluded that block-based VSP prediction for multiview video signals provides attractive coding gains with comparable complexity as traditional motion/disparity compensation.

Hydrogeology of the surficial and intermediate aquifers of central Sarasota County, Florida

USGS Publications Warehouse

Duerr, A.D.; Wolansky, R.M.

1986-01-01

The geohydrologic units underlying a 300 sq mi area in central Sarasota County, Florida, consist of the surficial aquifer, intermediate aquifers (Tamiami-upper Hawthorn and lower Hawthorn-upper Tampa aquifers) and confining units, the Floridan aquifer system, and the sub-Floridan confining unit. The saturated thickness of the surficial aquifer ranges from about 40 to 75 ft and the water table is generally within 5 ft of land surface. The Tamiami-upper Hawthorn is the uppermost intermediate aquifer. The top of the aquifer ranges from about 50 ft to about 75 below sea level and has an average thickness of about 100 ft. The lower Hawthorne-upper Tampa aquifer is the lowermost intermediate aquifer. The top of the aquifer ranges from about 190 to about 220 ft below sea level and its thickness ranges from about 200 to 250 ft. The quality of water in the surficial and the two intermediate aquifers is acceptable for potable use except near the coast. Water from the Floridan aquifer system is used primarily for agricultural purposes because it is too mineralized for most other uses; therefore, the surficial and intermediate aquifers are developed for water supply. The artesian pressure of the various aquifers generally increases with depth. A more detailed geohydrologic description is presented for the Ringling-MacArthur Reserve, a 51 sq mi area in the central part of the county that may be used by Sarasota County as a future water supply. Average annual rainfall is 56 inches and evapotranspiration is about 42 in at the Reserve. The area has a high water table, many sloughs and swamps, and undeveloped land, making it an attractive site as a potential source of water. (Author 's abstract)

75 FR 7284 - NIOSH Current Intelligence Bulletin-Asbestos Fibers and Other Elongate Mineral Particles: State...

Federal Register 2010, 2011, 2012, 2013, 2014

2010-02-18

... NIOSH 099-C] NIOSH Current Intelligence Bulletin--Asbestos Fibers and Other Elongate Mineral Particles... Current Intelligence Bulletin--Asbestos Fibers and Other Elongate Mineral Particles: State of the Science..., ``NIOSH Current Intelligence Bulletin--Asbestos Fibers and Other Elongate Mineral Particles: State of the...

Morphology of the transition from an axial high to a rift valley at the Southeast Indian Ridge and the relation to variations in mantle temperature

NASA Astrophysics Data System (ADS)

Shah, Anjana K.; SempéRé, Jean-Christophe

1998-03-01

The Southeast Indian Ridge exhibits a transition in axial morphology from an East Pacific Rise-like axial high near 100°E to a Mid-Atlantic Ridge-like rift valley near 116°E but spreads at a nearly constant rate of 74-76 mm/yr. Assuming that the source of this transition lies in variations in mantle temperature, we use shipboard gravity-derived crustal thickness and ridge flank depth to estimate the variations in temperature associated with the changes in morphological style. Within the transitional region, SeaBeam 2000 bathymetry shows scattered instances of highs, valleys, and split volcanic ridges at the axis. A comparison of axial morphology to abyssal hill shapes and symmetry properties suggests that this unorganized distribution is due to the ridge axis episodically alternating between an axial valley and a volcanic ridge. Axial morphology can then be divided into three classes, with distinct geographic borders: axial highs and rifted highs are observed west of a transform fault at 102°45'E; rift valleys are observed east of a transform fault at 114°E; and an intermediate-style morphology which alternates between a volcanic ridge and a shallow axial valley is observed between the two. One segment, between 107° and 108°30'E, forms an exception to the geographical boundaries. Gravity-derived crustal thickness and flank depth generally vary monotonically over the region, with the exception of the segment between 107°E and 108°30'E. The long-wavelength variations in these properties correlate with the above morphological classification. Gravity-derived crustal thickness varies on average ˜2 km between the axial high and rift valley regions. The application of previous models relating crustal thickness and mantle temperature places the corresponding temperature variation at 25°C-50°C, depending on the model used. The average depth of ridge flanks varies by ˜550 m over the study area. For a variation of 25°-50°C, thermal models of the mantle predict depth variations of 75-150 m. These values are consistent with observations when the combined contributions of crustal thickness and mantle density to ridge flank depth are considered, assuming Airy isostasy. Crustal thickness variations differ at the two transitions described above: A difference of 750 m in crustal thickness is observed at the rift valley/intermediate-style transition, suggesting small variations in crustal thickness and mantle temperature drive this transition. At the axial high-rifted high/intermediate-style transition, crustal thickness variations are not resolvable, suggesting that this transition is controlled by threshold values of crustal thickness and mantle temperature, and is perhaps related to the presence of a steady state magma chamber.

Differential patterns of 2D location versus depth decoding along the visual hierarchy.

PubMed

Finlayson, Nonie J; Zhang, Xiaoli; Golomb, Julie D

2017-02-15

Visual information is initially represented as 2D images on the retina, but our brains are able to transform this input to perceive our rich 3D environment. While many studies have explored 2D spatial representations or depth perception in isolation, it remains unknown if or how these processes interact in human visual cortex. Here we used functional MRI and multi-voxel pattern analysis to investigate the relationship between 2D location and position-in-depth information. We stimulated different 3D locations in a blocked design: each location was defined by horizontal, vertical, and depth position. Participants remained fixated at the center of the screen while passively viewing the peripheral stimuli with red/green anaglyph glasses. Our results revealed a widespread, systematic transition throughout visual cortex. As expected, 2D location information (horizontal and vertical) could be strongly decoded in early visual areas, with reduced decoding higher along the visual hierarchy, consistent with known changes in receptive field sizes. Critically, we found that the decoding of position-in-depth information tracked inversely with the 2D location pattern, with the magnitude of depth decoding gradually increasing from intermediate to higher visual and category regions. Representations of 2D location information became increasingly location-tolerant in later areas, where depth information was also tolerant to changes in 2D location. We propose that spatial representations gradually transition from 2D-dominant to balanced 3D (2D and depth) along the visual hierarchy. Copyright © 2016 Elsevier Inc. All rights reserved.

How Messenger RNA and Nascent Chain Sequences Regulate Translation Elongation.

PubMed

Choi, Junhong; Grosely, Rosslyn; Prabhakar, Arjun; Lapointe, Christopher P; Wang, Jinfan; Puglisi, Joseph D

2018-06-20

Translation elongation is a highly coordinated, multistep, multifactor process that ensures accurate and efficient addition of amino acids to a growing nascent-peptide chain encoded in the sequence of translated messenger RNA (mRNA). Although translation elongation is heavily regulated by external factors, there is clear evidence that mRNA and nascent-peptide sequences control elongation dynamics, determining both the sequence and structure of synthesized proteins. Advances in methods have driven experiments that revealed the basic mechanisms of elongation as well as the mechanisms of regulation by mRNA and nascent-peptide sequences. In this review, we highlight how mRNA and nascent-peptide elements manipulate the translation machinery to alter the dynamics and pathway of elongation.

Stepwise morphological changes and cytoskeletal reorganization of human mesenchymal stem cells treated by short-time cyclic uniaxial stretch.

PubMed

Parandakh, Azim; Tafazzoli-Shadpour, Mohammad; Khani, Mohammad-Mehdi

2017-06-01

This study aimed to investigate stepwise remodeling of human mesenchymal stem cells (hMSCs) in response to cyclic stretch through rearrangement and alignment of cells and cytoskeleton regulation toward smooth muscle cell (SMC) fate in different time spans. Image analysis techniques were utilized to calculate morphological parameters. Cytoskeletal reorganization was observed by investigating F-actin filaments using immunofluorescence staining, and expression level of contractile SMC markers was followed by a quantitative polymerase chain reaction method. Applying cyclic uniaxial stretch on cultured hMSCs, utilizing a costume-made device, led to alteration in fractal dimension (FD) and cytoskeleton structure toward continuous alignment and elongation of cells by elevation of strain duration. Actin filaments became more aligned perpendicular to the axis of mechanical stretch by increasing uniaxial loading duration. At first, FD met a significant decrease in 4 h loading duration then increased significantly by further loading up to 16 h, followed by another decrease up to 1 d of uniaxial stretching. HMSCs subjected to 24 h cyclic uniaxial stretching significantly expressed early and intermediate contractile SM markers. It was hypothesized that the increase in FD after 4 h while cells continuously became more aligned and elongated was due to initiation of change in phenotype that influenced arrangement of cells. At this point, change in cell phenotype started leading to change in morphology while mechanical loading still caused cell alignment and rearrangement. Results can be helpful when optimized engineered cells are needed based on mechanical condition for functional engineered tissue and cell therapy.

KIFC1-Like Motor Protein Associates with the Cephalopod Manchette and Participates in Sperm Nuclear Morphogenesis in Octopus tankahkeei

PubMed Central

Tan, Fu-Qing; Yang, Wan-Xi

2010-01-01

Background Nuclear morphogenesis is one of the most fundamental cellular transformations taking place during spermatogenesis. In rodents, a microtubule-based perinuclear structure, the manchette, and a C-terminal kinesin motor KIFC1 are believed to play crucial roles in this process. Spermatogenesis in Octopus tankahkeei is a good model system to explore whether evolution has created a cephalopod prototype of mammalian manchette-based and KIFC1-dependent sperm nuclear shaping machinery. Methodology/Principal Findings We detected the presence of a KIFC1-like protein in the testis, muscle, and liver of O. tankahkeei by Western Blot. Then we tracked its dynamic localization in spermatic cells at various stages using Immunofluorescence and Immunogold Electron Microscopy. The KIFC1-like protein was not expressed at early stages of spermatogenesis when no significant morphological changes occur, began to be present in early spermatid, localized around and in the nucleus of intermediate and late spermatids where the nucleus was dramatically elongated and compressed, and concentrated at one end of final spermatid. Furthermore, distribution of the motor protein during nuclear elongation and condensation overlapped with that of the cephalopod counterpart of manchette at a significant level. Conclusions/Significance The results support the assumption that the protein is actively involved in sperm nuclear morphogenesis in O. tankahkeei possibly through bridging the manchette-like perinuclear microtubules to the nucleus and assisting in the nucleocytoplasmic trafficking of specific cargoes. This study represents the first description of the role of a motor protein in sperm nuclear shaping in cephalopod. PMID:21187923

The very-long-chain hydroxy fatty acyl-CoA dehydratase PASTICCINO2 is essential and limiting for plant development

PubMed Central

Bach, Liên; Michaelson, Louise V.; Haslam, Richard; Bellec, Yannick; Gissot, Lionel; Marion, Jessica; Da Costa, Marco; Boutin, Jean-Pierre; Miquel, Martine; Tellier, Frédérique; Domergue, Frederic; Markham, Jonathan E.; Beaudoin, Frederic; Napier, Johnathan A.; Faure, Jean-Denis

2008-01-01

Very-long-chain fatty acids (VLCFAs) are synthesized as acyl-CoAs by the endoplasmic reticulum-localized elongase multiprotein complex. Two Arabidopsis genes are putative homologues of the recently identified yeast 3-hydroxy-acyl-CoA dehydratase (PHS1), the third enzyme of the elongase complex. We showed that Arabidopsis PASTICCINO2 (PAS2) was able to restore phs1 cytokinesis defects and sphingolipid long chain base overaccumulation. Conversely, the expression of PHS1 was able to complement the developmental defects and the accumulation of long chain bases of the pas2–1 mutant. The pas2–1 mutant was characterized by a general reduction of VLCFA pools in seed storage triacylglycerols, cuticular waxes, and complex sphingolipids. Most strikingly, the defective elongation cycle resulted in the accumulation of 3-hydroxy-acyl-CoA intermediates, indicating premature termination of fatty acid elongation and confirming the role of PAS2 in this process. We demonstrated by in vivo bimolecular fluorescence complementation that PAS2 was specifically associated in the endoplasmic reticulum with the enoyl-CoA reductase CER10, the fourth enzyme of the elongase complex. Finally, complete loss of PAS2 function is embryo lethal, and the ectopic expression of PHS1 led to enhanced levels of VLCFAs associated with severe developmental defects. Altogether these results demonstrate that the plant 3-hydroxy-acyl-CoA dehydratase PASTICCINO2 is an essential and limiting enzyme in VLCFA synthesis but also that PAS2-derived VLCFA homeostasis is required for specific developmental processes. PMID:18799749

Mechanical and interfacial characterization of laser welded Co-Cr alloy with different joint configurations

PubMed Central

Kokolis, John; Chakmakchi, Makdad; Theocharopoulos, Antonios; Prombonas, Anthony

2015-01-01

PURPOSE The mechanical and interfacial characterization of laser welded Co-Cr alloy with two different joint designs. MATERIALS AND METHODS Dumbbell cast specimens (n=30) were divided into 3 groups (R, I, K, n=10). Group R consisted of intact specimens, group I of specimens sectioned with a straight cut, and group K of specimens with a 45° bevel made at the one welding edge. The microstructure and the elemental distributions of alloy and welding regions were examined by an SEM/EDX analysis and then specimens were loaded in tension up to fracture. The tensile strength (TS) and elongation (ε) were determined and statistically compared among groups employing 1-way ANOVA, SNK multiple comparison test (α=.05) and Weibull analysis where Weibull modulus m and characteristic strength σο were identified. Fractured surfaces were imaged by a SEM. RESULTS SEM/EDX analysis showed that cast alloy consists of two phases with differences in mean atomic number contrast, while no mean atomic number was identified for welded regions. EDX analysis revealed an increased Cr and Mo content at the alloy-joint interface. All mechanical properties of group I (TS, ε, m and σο) were found inferior to R while group K showed intermediated values without significant differences to R and I, apart from elongation with group R. The fractured surfaces of all groups showed extensive dendritic pattern although with a finer structure in the case of welded groups. CONCLUSION The K shape joint configuration should be preferred over the I, as it demonstrates improved mechanical strength and survival probability. PMID:25722836

Small Scales Structure of MHD Turbulence, Tubes or Ribbons?

NASA Astrophysics Data System (ADS)

Verdini, A.; Grappin, R.; Alexandrova, O.; Lion, S.

2017-12-01

Observations in the solar wind indicate that turbulent eddies change their anisotropy with scales [1]. At large scales eddies are elongated in direction perpendicular to the mean-field axis. This is the result of solar wind expansion that affects both the anisotropy and single-spacecraft measurments [2,3]. At small scales one recovers the anisotropy expected in strong MHD turbulence and constrained by the so-called critical balance: eddies are elongated along the mean-field axis. However, the actual eddy shape is intermediate between tubes and ribbons, preventing us to discriminate between two concurrent theories that predict 2D axysimmetric anisotropy [4] or full 3D anisotropy [5]. We analyse 10 years of WIND data and apply a numerically-derived criterion to select intervals in which solar wind expansion is expected to be negligible. By computing the anisotropy of structure functions with respect to the local mean field we obtain for the first time scaling relations that are in agreement with full 3D anisotropy, i.e. ribbons-like structures. However, we cannot obtain the expected scaling relations for the alignment angle which, according to the theory, is physically responsible for the departure from axisymmetry. In addition, a further change of anisotropy occurs well above the proton scales. We discuss the implication of our findings and how numerical simulations can help interpreting the observed spectral anisotropy. [1] Chen et al., ApJ, 768:120, 2012 [2] Verdini & Grappin, ApJL, 808:L34, 2015 [3] Vech & Chen, ApJL, 832:L16, 2016 [4] Goldreich & Shridar, ApJ, 438:763, 1995 [5] Boldyrev, ApJL, 626:L37, 2005

Pulsed jet dynamics of squid hatchlings at intermediate Reynolds numbers.

PubMed

Bartol, Ian K; Krueger, Paul S; Stewart, William J; Thompson, Joseph T

2009-05-01

Squid paralarvae (hatchlings) rely predominantly on a pulsed jet for locomotion, distinguishing them from the majority of aquatic locomotors at low/intermediate Reynolds numbers (Re), which employ oscillatory/undulatory modes of propulsion. Although squid paralarvae may delineate the lower size limit of biological jet propulsion, surprisingly little is known about the hydrodynamics and propulsive efficiency of paralarval jetting within the intermediate Re realm. To better understand paralarval jet dynamics, we used digital particle image velocimetry (DPIV) and high-speed video to measure bulk vortex properties (e.g. circulation, impulse, kinetic energy) and other jet features [e.g. average and peak jet velocity along the jet centerline (U(j) and U(jmax), respectively), jet angle, jet length based on the vorticity and velocity extents (L(omega) and L(V), respectively), jet diameter based on the distance between vorticity peaks (D(omega)), maximum funnel diameter (D(F)), average and maximum swimming speed (U and U(max), respectively)] in free-swimming Doryteuthis pealeii paralarvae (1.8 mm dorsal mantle length) (Re(squid)=25-90). Squid paralarvae spent the majority of their time station holding in the water column, relying predominantly on a frequent, high-volume, vertically directed jet. During station holding, paralarvae produced a range of jet structures from spherical vortex rings (L(omega)/D(omega)=2.1, L(V)/D(F)=13.6) to more elongated vortex ring structures with no distinguishable pinch-off (L(omega)/D(omega)=4.6, L(V)/D(F)=36.0). To swim faster, paralarvae increased pulse duration and L(omega)/D(omega), leading to higher impulse but kept jet velocity relatively constant. Paralarvae produced jets with low slip, i.e. ratio of jet velocity to swimming velocity (U(j)/U or U(jmax)/U(max)), and exhibited propulsive efficiency [eta(pd)=74.9+/-8.83% (+/-s.d.) for deconvolved data] comparable with oscillatory/undulatory swimmers. As slip decreased with speed, propulsive efficiency increased. The detection of high propulsive efficiency in paralarvae is significant because it contradicts many studies that predict low propulsive efficiency at intermediate Re for inertial forms of locomotion.

Morphogenesis and grain size variation of alluvial gold recovered in auriferous sediments of the Tormes Basin (Iberian Peninsula) using a simple correspondence analysis

NASA Astrophysics Data System (ADS)

Barrios, S.; Merinero, R.; Lozano, R.; Orea, I.

2015-12-01

With present techniques it is difficult to determine whether the gold particles present at fluvial placers have come from one or multiple sources. Knowledge of this would be useful in prospecting for larger gold deposits. The aim of the present work was to test the potential of a technique based on modern visual and classic statistical methods to determine the single or multisource origin of gold particles at different sites in the Tormes Basin (Central Iberian Zone of the Iberian Massif, Iberian Peninsula). This basin contains numerous lode and placer gold deposits that have been exploited since ancient times. Today, gold nuggets (usually associated with quartz, 0.2-6 g in weight, 0.53-3.74 cm long and mostly discoidal in shape and of intermediate roundness) can be recovered from the sediments of the upper reaches of the River Tormes. These nuggets, as well as small gold particles collected at three gravel pits from across the basin (all of which showed abrasion marks) were examined by optical and/or environmental scanning electron microscopy, and the differences in their dimensions and morphological features noted. Simple correspondence analysis of the sphericity and roundness of the nuggets and particles was used to morphologically classify the gold samples collected at each location. The gold nuggets were best classified as elongated rods of intermediate roundness. Surprisingly, the gold particles from the most upstream and downstream gravel pits were best described as discs/sub-discs of rounded appearance, while those from the intermediate gravel pit were discs of intermediate roundness. Analysis of the variance followed by the Tukey honest significant differences test revealed the particles from the most upstream gravel pit to be significantly more flattened and smaller. These were therefore transported further from their source than the particles collected at the other two pits. These results suggest that multiple sources of sedimentary gold exist in the Tormes Basin and that these feed these different gravel pits. Present techniques for classifying gold would not have detected these differences.

NW Pacific mid-depth ventilation changes during the Holocene

NASA Astrophysics Data System (ADS)

Rella, S.; Uchida, M.

2010-12-01

During the last 50 years the oxygen content of North Pacific Intermediate Water primarily originating in the Okhotsk Sea has declined suggesting decreased mid-depth water circulation, likely leading to changes in biological productivity in the NW Pacific realm and a decrease in CO2 drawdown. It is therefore of high interest to elucidate the climate-oceanic interconnections of the present interglacial period (Holocene) in the NW Pacific, in order to predict possible future climate and surface productivity changes associated with a decrease in mid-depth ventilation in this ecologically sensitive region. However, such efforts have been hampered so far by the lack of appropriate sediment cores with fast sedimentation rates during the Holocene. Core CK05-04 that was recovered in 2005 from off Shimokita peninsula, Japan, at ~1000 m depth shows sedimentation rates of ~80 cm/kyr during the Holocene and therefore presents an ideal opportunity to reconstruct for the first time the Holocene ventilation history of the NW Pacific Ocean. We employ Accelerator Mass Spectroscopy (NIES-TERRA, Tsukuba) radiocarbon analysis of co-existing benthic and planktonic foraminifera to conclude on the ventilation age of the mid-depth water using benthic-planktonic radiocarbon age differences. At the conference we would like to present the results.

Born to run: control of transcription elongation by RNA polymerase II.

PubMed

Chen, Fei Xavier; Smith, Edwin R; Shilatifard, Ali

2018-05-08

The dynamic regulation of transcription elongation by RNA polymerase II (Pol II) is an integral part of the implementation of gene expression programmes during development. In most metazoans, the majority of transcribed genes exhibit transient pausing of Pol II at promoter-proximal regions, and the release of Pol II into gene bodies is controlled by many regulatory factors that respond to environmental and developmental cues. Misregulation of the elongation stage of transcription is implicated in cancer and other human diseases, suggesting that mechanistic understanding of transcription elongation control is therapeutically relevant. In this Review, we discuss the features, establishment and maintenance of Pol II pausing, the transition into productive elongation, the control of transcription elongation by enhancers and by factors of other cellular processes, such as topoisomerases and poly(ADP-ribose) polymerases (PARPs), and the potential of therapeutic targeting of the elongation stage of transcription by Pol II.

Genetic separation of phototropism from blue light inhibition of hypocotyl elongation on Arabidopsis

DOE Office of Scientific and Technical Information (OSTI.GOV)

Liscum, E.; Young, J.C.; Hangarter, R.P.

1991-05-01

Phototropism and inhibition of stem elongation occur in response to blue light-induced inhibition of cell elongation. However, phototropism is a low fluence response and inhibition of hypocotyl elongation is a high irradiance response. The authors have isolated several mutant lines of Arabidopsis which lack blue light-induced inhibition of hypocotyl elongation but retain normal phototropic functions. In addition, a mutant line which completely lacks the phototropic response retains normal blue light-induced inhibition of hypocotyl elongation. F1 progeny of crosses between these two mutant classes exhibited wild-type phototropism and inhibition of hypocotyl elongation in response to blue light stimuli. In the F2more » generation, one in sixteen seedlings were double mutants lacking both phototropism and blue light-induced hypocotyl growth inhibition. These studies conclusively show that blue light-induced phototropism and hypocotyl growth inhibition function through genetically distinct signal transduction or response systems.« less

A Conserved Nuclear Cyclophilin Is Required for Both RNA Polymerase II Elongation and Co-transcriptional Splicing in Caenorhabditis elegans

PubMed Central

Ahn, Jeong H.; Rechsteiner, Andreas; Strome, Susan; Kelly, William G.

2016-01-01

The elongation phase of transcription by RNA Polymerase II (Pol II) involves numerous events that are tightly coordinated, including RNA processing, histone modification, and chromatin remodeling. RNA splicing factors are associated with elongating Pol II, and the interdependent coupling of splicing and elongation has been documented in several systems. Here we identify a conserved, multi-domain cyclophilin family member, SIG-7, as an essential factor for both normal transcription elongation and co-transcriptional splicing. In embryos depleted for SIG-7, RNA levels for over a thousand zygotically expressed genes are substantially reduced, Pol II becomes significantly reduced at the 3’ end of genes, marks of transcription elongation are reduced, and unspliced mRNAs accumulate. Our findings suggest that SIG-7 plays a central role in both Pol II elongation and co-transcriptional splicing and may provide an important link for their coordination and regulation. PMID:27541139

The effect of ethylene on root growth of Zea mays seedlings

NASA Technical Reports Server (NTRS)

Whalen, M. C.; Feldman, L. J.

1988-01-01

The control of primary root growth in Zea mays cv. Merit by ethylene was examined. At applied concentrations of ethylene equal to or greater than 0.1 microliter L-1, root elongation during 24 h was inhibited. The half-maximal response occurred at 0.6 microliter L-1 and the response saturated at 6 microliters L-1. Inhibition of elongation took place within 20 min. However, after ethylene was removed, elongation recovered to control values within 15 min. Root elongation was also inhibited by green light. The inhibition caused by a 24-h exposure to ethylene was restricted to the elongating region just behind the apex, with inhibition of cortical cell elongation being the primary contributor to the effect. Based on use of 2,5-norbornadiene, a gaseous competitive inhibitor of ethylene, it was concluded that endogenous ethylene normally inhibits root elongation.

Coherent response of Antarctic Intermediate Water and Atlantic Meridional Overturning Circulation during the last deglaciation: reconciling contrasting neodymium isotope reconstructions in tropical Atlantic

NASA Astrophysics Data System (ADS)

Gu, S.; Liu, Z.; Zhang, J.; Rempfer, J.; Joos, F.; Oppo, D.

2017-12-01

Antarctic Intermediate Water (AAIW) plays important roles in the global climate system and the global ocean nutrient and carbon cycles. However, it is unclear how AAIW responds to global climate changes. In particular, neodymium isotopic composition (ɛNd) reconstructions from different locations in tropical Atlantic, have led to a debate on the relationship between the northward penetration of AAIW into the tropical Atlantic and Atlantic Meridional Overturning Circulation (AMOC) variability during the last deglaciation. We resolve this controversy by studying the transient oceanic evolution during the last deglaciation using a neodymium-enabled ocean model. Our results suggest a coherent response of AAIW and AMOC: when AMOC weakens, the northward penetration and transport of AAIW decreases while its depth and thickness increase. Our study highlights that as part of the return flow of the North Atlantic Deep Water (NADW), the northward penetration of AAIW in Atlantic is determined predominately by AMOC intensity. Moreover, the inconsistency among different tropical Atlantic ɛNd reconstructions is reconciled by considering their corresponding core locations and depths, which were influenced by different water masses and ocean currents in the past. The very radiogenic water from the bottom of the Gulf of Mexico and Caribbean Sea, which was previously overlooked in interpretations of deglacial ɛNd variability, can be transported to shallow layers during active AMOC, and modulates ɛNd in the tropical Atlantic. Changes in the AAIW core depth must also be considered. Thus, interpretation of ɛNd reconstructions from the tropical Atlantic is more complicated than suggested in previous studies. ­­

DOE Office of Scientific and Technical Information (OSTI.GOV)

Techtmann, Stephen M.; Fortney, Julian L.; Ayers, Kati A.

The waters of the Eastern Mediterranean are characterized by unique physical and chemical properties within separate water masses occupying different depths. Distinct water masses are present throughout the oceans, which drive thermohaline circulation. These water masses may contain specific microbial assemblages. The goal of this study was to examine the effect of physical and geological phenomena on the microbial community of the Eastern Mediterranean water column. Chemical measurements were combined with phospholipid fatty acid (PLFA) analysis and high-throughput 16S rRNA sequencing to characterize the microbial community in the water column at five sites. We demonstrate that the chemistry and microbialmore » community of the water column were stratified into three distinct water masses. The salinity and nutrient concentrations vary between these water masses. Nutrient concentrations increased with depth, and salinity was highest in the intermediate water mass. Our PLFA analysis indicated different lipid classes were abundant in each water mass, suggesting that distinct groups of microbes inhabit these water masses. 16S rRNA gene sequencing confirmed the presence of distinct microbial communities in each water mass. Taxa involved in autotrophic nitrogen cycling were enriched in the intermediate water mass suggesting that microbes in this water mass may be important to the nitrogen cycle of the Eastern Mediterranean. The Eastern Mediterranean also contains numerous active hydrocarbon seeps. We sampled above the North Alex Mud Volcano, in order to test the effect of these geological features on the microbial community in the adjacent water column. The community in the waters overlaying the mud volcano was distinct from other communities collected at similar depths and was enriched in known hydrocarbon degrading taxa. Furthermore, our results demonstrate that physical phenomena such stratification as well as geological phenomena such as mud volcanoes strongly affect microbial community structure in the Eastern Mediterranean water column.« less

Vertebral shape and body elongation in Triturus newts.

PubMed

Urošević, Aleksandar; Slijepčević, Maja D; Arntzen, Jan W; Ivanović, Ana

2016-10-01

Body elongation in vertebrates is often related to a lengthening of the vertebrae and an increase in their number. Changes in the number and shape of vertebrae are not necessarily linked. In tailed amphibians, a change in body shape is mostly associated with an increase in the number of trunk and tail vertebrae. Body elongation without a numerical change of vertebrae is rare. In Triturus aquatic salamanders body elongation is achieved by trunk elongation through an increase in the number of trunk vertebrae. We used computed microtomography and three-dimensional geometric morphometrics to document the size, shape and number of trunk vertebrae in seven Triturus species. The data suggest that body elongation has occurred more frequently than body shortening, possibly related to a more aquatic versus a more terrestrial locomotor style. Our results show that body elongation is achieved through an increase in the number of trunk vertebrae, and that interspecific differences in vertebral shape are correlated with this pattern of elongation. More gracile trunk vertebrae were found in the more elongated species. The shape differences are such that single trunk vertebrae can be used for the identification of species with a possible application in the identification of subfossil and fossil material. Copyright © 2016 Elsevier GmbH. All rights reserved.

On sharp vorticity gradients in elongating baroclinic eddies and their stabilization with a solid-body rotation

NASA Astrophysics Data System (ADS)

Sutyrin, Georgi G.

2016-06-01

Wide compensated vortices are not able to remain circular in idealized two-layer models unless the ocean depth is assumed to be unrealistically large. Small perturbations on both cyclonic and anticyclonic eddies grow slower if a middle layer with uniform potential vorticity (PV) is added, owing to a weakening of the vertical coupling between the upper and lower layers and a reduction of the PV gradient in the deep layer. Numerical simulations show that the nonlinear development of the most unstable elliptical mode causes self-elongation of the upper vortex core and splitting of the deep PV anomaly into two corotating parts. The emerging tripolar flow pattern in the lower layer results in self-intensification of the fluid rotation in the water column around the vortex center. Further vortex evolution depends on the model parameters and initial conditions, which limits predictability owing to multiple equilibrium attractors existing in the dynamical system. The vortex core strips thin filaments, which roll up into submesoscale vortices to result in substantial mixing at the vortex periphery. Stirring and damping of vorticity by bottom friction are found to be essential for subsequent vortex stabilization. The development of sharp PV gradients leads to nearly solid-body rotation inside the vortex core and formation of transport barriers at the vortex periphery. These processes have important implications for understanding the longevity of real-ocean eddies.

Differential photosynthetic and morphological adaptations to low light affect depth distribution of two submersed macrophytes in lakes.

PubMed

Chen, Jianfeng; Cao, Te; Zhang, Xiaolin; Xi, Yilong; Ni, Leyi; Jeppesen, Erik

2016-10-03

To evaluate the relative importance of photosynthetic versus morphological adaptations of submersed macrophytes to low light intensity in lakes, rapid light curves (RLCs), morphological parameters, relative growth rate (RGR), clonal reproduction and abundance of two submersed macrophytes (Potamogeton maackianus and Vallisneria natans) were examined under 2.8%, 7.1%, 17.1% and 39.5% ambient light in a field and outdoor experimental study. The plants increased their initial slope of RLCs (α) and decreased their minimum saturating irradiance (E k ) and maximum relative electron transport rate (ETRm) of RLCs under low light stress, but V. natans was more sensitive in RLCs than P. maackianus. Accordingly, the RGR, plant height and abundance of P. maackianus were higher in the high light regimes (shallow water) but lower in the low light regimes than those of V. natans. At the 2.8% ambient light, V. natans produced ramets and thus fulfilled its population expansion, in contrast to P. maackianus. The results revealed that P. maackianus as a canopy-former mainly elongated its shoot length towards the water surface to compensate for the low light conditions, however, it became limited in severe low light stress conditions. V. natans as a rosette adapted to low light stress mainly through photosynthetic adjustments and superior to severely low light than shoot elongation.

The Distinct Biometric Features of High Myopia Compared to Moderate Myopia.

PubMed

Chung, Hye Jin; Park, Chan Kee

2016-12-01

To evaluate changes in biometric parameters in myopic eyes. 412 eyes of 412 young myopic patients underwent ophthalmic examinations including assessments of refractive error, axial length (AL), anterior chamber depth (ACD), and central corneal thickness (CCT). By using spectral domain optical coherence tomography (SD-OCT), peripapillary retinal nerve fiber layer (pRNFL) thickness was measured. Subjects were divided into two groups: a moderate-myope group (-6 diopters (D) or more) and a high-myope group (less than -6 D). The relationships among ocular biometric parameters including pRNFL thickness, AL, ACD, and CCT were calculated for each group. In the moderate-myopia group, the anterior chamber deepened as AL increased (Pearson's coefficient = 0.346, p < 0.01). However, in the high-myopia group, ACD did not correlate with AL (Pearson's r = 0.065, p = 0.383). Average pRNFL thickness was also more related to SE than AL in highly myopic eyes. In highly myopic eyes, ACD did not increase as AL increased. pRNFL thickness was more related to SE than to AL. That might be due to the uneven elongation of anterior and posterior portions of the eyeball and the discrepancy between distance from the cornea to the fovea and distance from the cornea to the bottom of the eyeball as axial eye elongation. Interpretation of ocular biometric parameter in highly myopic eyes should consider these differences.

Strong depth-related zonation of megabenthos on a rocky continental margin (∼700-4000 m) off southern Tasmania, Australia.

PubMed

Thresher, Ronald; Althaus, Franziska; Adkins, Jess; Gowlett-Holmes, Karen; Alderslade, Phil; Dowdney, Jo; Cho, Walter; Gagnon, Alex; Staples, David; McEnnulty, Felicity; Williams, Alan

2014-01-01

Assemblages of megabenthos are structured in seven depth-related zones between ∼700 and 4000 m on the rocky and topographically complex continental margin south of Tasmania, southeastern Australia. These patterns emerge from analysis of imagery and specimen collections taken from a suite of surveys using photographic and in situ sampling by epibenthic sleds, towed video cameras, an autonomous underwater vehicle and a remotely operated vehicle (ROV). Seamount peaks in shallow zones had relatively low biomass and low diversity assemblages, which may be in part natural and in part due to effects of bottom trawl fishing. Species richness was highest at intermediate depths (1000-1300 m) as a result of an extensive coral reef community based on the bioherm-forming scleractinian Solenosmilia variabilis. However, megabenthos abundance peaked in a deeper, low diversity assemblage at 2000-2500 m. The S. variabilis reef and the deep biomass zone were separated by an extensive dead, sub-fossil S. variabilis reef and a relatively low biomass stratum on volcanic rock roughly coincident with the oxygen minimum layer. Below 2400 m, megabenthos was increasingly sparse, though punctuated by occasional small pockets of relatively high diversity and biomass. Nonetheless, megabenthic organisms were observed in the vast majority of photographs on all seabed habitats and to the maximum depths observed--a sandy plain below 3950 m. Taxonomic studies in progress suggest that the observed depth zonation is based in part on changing species mixes with depth, but also an underlying commonality to much of the seamount and rocky substrate biota across all depths. Although the mechanisms supporting the extraordinarily high biomass in 2000-2500 m depths remains obscure, plausible explanations include equatorwards lateral transport of polar production and/or a response to depth-stratified oxygen availability.

Instability induced by orthopyroxene phase transformation and implications for deep earthquakes below 300 km depth

NASA Astrophysics Data System (ADS)

Shi, F.; Wang, Y.; Zhang, J.; Yu, T.; Zhu, L.

2017-12-01

Global earthquake occurrence rate falls exponentially from the surface to 300 km depth, and then peaks again near 500 km depth. Unassisted frictional sliding will not function at depth below the brittle-ductile transition depth (10-15 km) because increasing pressure trends to inhibit frictional sliding and increasing temperature promotes ductile flow. Two main hypotheses have been proposed and demonstrated in the laboratory for the generation of earthquakes at depth, including dehydration embrittlement (e.g., Rayleigh and Paterson, 1965) for intermediate-depth (70-300 km) earthquakes, metastable olivine phase transformation induced anticrack faulting (e.g., Green and Burnley, 1989) for deep-focus (410-660 km) earthquakes. However, the possibility of earthquake generation by pyroxene phase transformation, another important constituent mineral in the upper mantle and transition zone has never been explored in the laboratory. Here we report axial deformation experiments on hypersthene [(Mg,Fe)SiO3], which has the same structure as enstatite, with the phase transformation to high-pressure monoclinic phase (same structure as the high-pressure clinoenstatite) occurring at lower pressures, in a deformation-DIA (D-DIA) apparatus interfaced with an acoustic emission (AE) monitoring system. Our results show that hypersthene deformed within its stability field (<2GPa and 1000 oC) behaves in a ductile manner without any AE activity. In contrast, numerous AE events were observed during the deformation of metastable hyposthene in its high pressure monoclinic phase field (>5GPa, 1000-1300 oC). This finding provides an additional viable mechanism for earthquakes at depths >300km and moonquakes at 700 - 1200 km depths. Reference: Barcheck, C. Grace, et al. EPSL,349 (2012): 153-160;van Keken, Peter E., et al.JGR,116.B1 (2011);Green II, H. W., and P. C. Burnley. Nature 341.6244 (1989): 733-737.

Photosynthate partitioning in basal zones of tall fescue leaf blades. [Festuca arundinacea Schreb

DOE Office of Scientific and Technical Information (OSTI.GOV)

Allard, G.; Nelson, C.J.

Elongating grass leaves have successive zones of cell division, cell elongation, and cell maturation in the basal portion of the blade and are a strong sink for photosynthate. Our objective was to determine dry matter (DM) deposition and partitioning in basal zones of elongating tall fescue (Festuca arundinacea Schreb.) leaf blades. Vegetative tall fescue plants were grown in continuous light (350 micromoles per square meter per second photosynthetic photon flux density) to obtain a constant spatial distribution of elongation growth with time. Content and net deposition rates of water-soluble carbohydrates (WSC) and DM along elongating leaf blades were determined. Thesemore » data were compared with accumulation of {sup 14}C in the basal zones following leaf-labeling with {sup 14}CO{sub 2}. Net deposition of DM was highest in the active cell elongation zone, due mainly to deposition of WSC. The maturation zone, just distal to the elongation zone, accounted for 22% of total net deposition of DM in elongating leaves. However, the spatial profile of {sup 14}C accumulation suggested that the elongation zone and the maturation zone were sinks of equal strength. WSC-free DM accounted for 55% of the total net DM deposition in elongating leaf blades, but only 10% of incoming {sup 14}C-photosynthate accumulated in the water-insoluble fraction (WIF {approximately} WSC-free DM) after 2 hours. In the maturation zone, more WSC was used for synthesis of WSC-free DM than was imported as recent photosynthate.« less

Intermediate to deep water hydrographic changes of the Japan Sea over the past 10 Myr, inferred from radiolarian data (IODP Exp. 346, Site U1425)

NASA Astrophysics Data System (ADS)

Matsuzaki, Kenji M.; Itaki, Takuya; Tada, Ryuji; Kurokawa, Shunsuke

2017-04-01

The Japan Sea is a back-arc basin opened under a continental rifting during the Early to Middle Miocene (ca. 25-13 Ma). This area is characterized by active tectonism, which drastically modified the Japan Sea paleogeography such as the sill depth of its key straits. In modern condition, the Japan Sea is connected to adjacent marginal seas and the Pacific Ocean by four straits shallower than 130 m. These straits are the Tsushima Strait connecting to the East China Sea, the Tsugaru Strait connecting to the Pacific, and the Soya and Mamiya Straits connecting to the Sea of Okhotsk. Therefore, the intermediate and deep water of the Japan Sea is isolated, leading the formation of a unique and regional deep sea water, known as the Japan Sea Proper Water. However, past studies show that during the late Miocene and Pliocene, only the Tsugaru Strait connecting to the North Pacific was opened. This strait was deeper during Plio-Miocene and have likely enable inflow of deep to intermediate water of the North Pacific in the Japan Sea. Radiolarians are one of the planktic micro-organisms group bearing siliceous skeletons. Their species comprise shallow to deep water dwellers, sensitive to changes in sea water physical/ecological properties forced by climate changes. Their fossils are known for be well preserved in the deep-sea sediments of the North Pacific. Therefore, in this study we propose to monitor changes in intermediate to deep water hydrography of the Japan Sea since the late Miocene, using radiolarian as an environmental proxy. In 2013 the IODP Expedition 346 retrieved sediment cores at different sites in the Japan Sea. In this study, we have analyzed 139 core sediments samples collected at Site U1425. This site is situated in the middle of the Yamato Bank. We selected this site because the past 10 Myr could be recovered continuously without hiatuses. Changes in radiolarian assemblages reveal that the oceanographic setting of the Japan Sea changed drastically at ca. 2.7 Ma. For older interval (2.7- 10 Ma), deep water species of the North Pacific could be identified at site U1425, inferring influences of deep water from the North Pacific and consequently a deeper sill depths of the connecting strait. Radiolarian assemblages also show that the intermediate water of the Japan sea is characterized by taxa living in equatorial to mid latitude area of the Northwest Pacific during the time interval between 2.7-10 Ma. While between 4 and 5 Ma, taxa related to the Sea of Okhotsk show very high abundances, inferring also inflow of intermediate water from the Sea of Okhotsk in the Japan Sea.

Subduction zone seismicity and the thermo-mechanical evolution of downgoing lithosphere

NASA Astrophysics Data System (ADS)

Wortel, M. J. R.; Vlaar, N. J.

1988-09-01

In this paper we discuss characteristic features of subduction zone seismicity at depths between about 100 km and 700 km, with emphasis on the role of temperature and rheology in controlling the deformation of, and the seismic energy release in downgoing lithosphere. This is done in two steps. After a brief review of earlier developments, we first show that the depth distribution of hypocentres at depths between 100 km and 700 km in subducted lithosphere can be explained by a model in which seismic activity is confined to those parts of the slab which have temperatures below a depth-dependent critical value T cr. Second, the variation of seismic energy release (frequency of events, magnitude) with depth is addressed by inferring a rheological evolution from the slab's thermal evolution and by combining this with models for the system of forces acting on the subducting lithosphere. It is found that considerable stress concentration occurs in a reheating slab in the depth range of 400 to 650 700 km: the slab weakens, but the stress level strongly increases. On the basis of this stress concentration a model is formulated for earthquake generation within subducting slabs. The model predicts a maximum depth of seismic activity in the depth range of 635 to 760 km and, for deep earthquake zones, a relative maximum in seismic energy release near the maximum depth of earthquakes. From our modelling it follows that, whereas such a maximum is indeed likely to develop in deep earthquake zones, zones with a maximum depth around 300 km (such as the Aleutians) are expected to exhibit a smooth decay in seismic energy release with depth. This is in excellent agreement with observational data. In conclusion, the incoroporation of both depth-dependent forces and depth-dependent rheology provides new insight into the generation of intermediate and deep earthquakes and into the variation of seismic activity with depth. Our results imply that no barrier to slab penetration at a depth of 650 700 km is required to explain the maximum depth of seismic activity and the pattern of seismic energy release in deep earthquake zones.

An ethylene and ROS-dependent pathway is involved in low ammonium-induced root hair elongation in Arabidopsis seedlings.

PubMed

Zhu, Changhua; Yang, Na; Guo, Zhengfei; Qian, Meng; Gan, Lijun

2016-08-01

Root hairs are plastic in response to nutrient supply, but relatively little is known about their development under low ammonium (NH4(+)) conditions. This study showed that reducing NH4(+) for 3 days in wild-type Arabidopsis seedlings resulted in drastic elongation of root hairs. To investigate the possible mediation of ethylene and auxin in this process, seedlings were treated with 2,3,5-triiodobenzoic acid (TIBA, auxin transport inhibitor), 1-naphthylphthalamic acid (NPA, auxin transport inhibitor), p-chlorophenoxy isobutyric acid (PCIB, auxin action inhibitor), aminoethoxyvinylglycine (AVG, chemical inhibitor of ethylene biosynthesis), or silver ions (Ag(+), ethylene perception antagonist) under low NH4(+) conditions. Our results showed that TIBA, NPA and PCIB did not inhibit root hair elongation under low NH4(+) conditions, while AVG and Ag(+) completely inhibited low NH4(+)-induced root hair elongation. This suggested that low NH4(+)-induced root hair elongation was dependent on the ethylene pathway, but not the auxin pathway. Further genetic studies revealed that root hair elongation in auxin-insensitive mutants was sensitive to low NH4(+) treatment, but elongation was less sensitive in ethylene-insensitive mutants than wild-type plants. In addition, low NH4(+)-induced root hair elongation was accompanied by reactive oxygen species (ROS) accumulation. Diphenylene iodonium (DPI, NADPH oxidase inhibitor) and dimethylthiourea (DMTU, ROS scavenger) inhibited low NH4(+)-induced root hair elongation, suggesting that ROS were involved in this process. Moreover, ethylene acted together with ROS to modulate root hair elongation under low NH4(+) conditions. These results demonstrate that a signaling pathway involving ethylene and ROS participates in regulation of root hair elongation when Arabidopsis seedlings are subjected to low NH4(+) conditions. Copyright © 2016 Elsevier Masson SAS. All rights reserved.

Geophysics and Tectonic Development of the Caroline Basin.

DTIC Science & Technology

1983-05-01

three diverse (shallow and intermediate depth ) epicenters scattered along the eastern margin of the Caroline Basin, one mech- anism determination has been...between the plates could conceivably change to a relative left-lateral motion of the Pacific Plate along a transform boundary. Again there is no...Sea Drilling Project, southwest Pacific structures : Geotimes, v. 18, P. 18-21. Scientific Staff, 1978, Leg 60 ends in Guam: Geotimes, v. 23, p. 19-23

Variation of energy absorption and exposure buildup factors with incident photon energy and penetration depth for boro-tellurite (B2O3-TeO2) glasses

NASA Astrophysics Data System (ADS)

Sayyed, M. I.; Elhouichet, H.

2017-01-01

The gamma ray energy absorption (EABF) and exposure buildup factors (EBF) of (100-x)TeO2-xB2O3 glass systems (where x=5, 10, 15, 20, 22.5 and 25 mol%) have been calculated in the energy region 0.015-15 MeV up to a penetration depth of 40 mfp (mean free path). The five parameters (G-P) fitting method has been used to estimate both EABF and EBF values. Variations of EABF and EBF with incident photon energy and penetration depth have been studied. It was found that EABF and EBF values were higher in the intermediate energy region, for all the glass systems. Furthermore, boro-tellurite glass with 5 mol% B2O3, was found to present the lowest EABF and EBF values, hence it is superior gamma-ray shielding material. The results indicate that the boro-tellurite glasses can be used as radiation shielding materials.

Response of wetland herbaceous communities to gradients of light and substrate following disturbance by thermal pollution

USGS Publications Warehouse

Dunn, Christopher P.; Scott, Michael L.

1987-01-01

The influence of thermal disturbance and site characteristics on distribution of herbs was studied in portions of a 3020 ha wetland in the southeastern USA. Presence-absence of 52 species in 130 0.25 m2 plots was determined from four sites with different disturbance histories and from an undisturbed site. Data from the four disturbed sites were ordinated by detrended correspondence analysis. Differences in species composition among sites (coarse scale) were associated with water depth, light, and substrate type. Within a site (at a fine scale), correlation of environmental variables with ordination scores at a chronically disturbed site was weakly correlated with light (r=0.50). At two sites with episodic disturbance, species composition correlated significantly and positively with substrate and water depth. At a recovering site, vegetation patterns were moderately correlated with water depth (r=−0.52). Species richness was correlated with substrate type along the disturbance gradient. Our results are consistent the intermediate disturbance hypothesis and the subsidy-stress gradient concept.

Abscisic Acid Stimulates Elongation of Excised Pea Root Tips

PubMed Central

Gaither, Douglas H.; Lutz, Donald H.; Forrence, Leonard E.

1975-01-01

Excised Pisum sativum L. root tips were incubated in a pH 5.2 sucrose medium containing abscisic acid. Elongation growth was inhibited by 100 μm abscisic acid. However, decreasing the abscisic acid concentration caused stimulation of elongation, the maximum response (25% to 30%) occurring at 1 μm abscisic acid. Prior to two hours, stimulation of elongation by 1 μm abscisic acid was not detectable. Increased elongation did not occur in abscisic acid-treated root tips of Lens culinaris L., Phaseolus vulgaris L., or Zea mays L. PMID:16659198

The molecular mechanisms underlying lens fiber elongation

PubMed Central

Audette, Dylan S.; Scheiblin, David A.; Duncan, Melinda K.

2016-01-01

Lens fiber cells are highly elongated cells with complex membrane morphologies that are critical for the transparency of the ocular lens. Investigations into the molecular mechanisms underlying lens fiber cell elongation were first reported in the 1960s, however, our understanding of the process is still poor nearly 50 years later. This review summarizes what is currently hypothesized about the regulation of lens fiber cell elongation along with the available experimental evidence, and how this information relates to what is known about the regulation of cell shape/elongation in other cell types, particularly neurons. PMID:27015931

System and method for manufacture of airfoil components

DOEpatents

Moors, Thomas Michael

2016-11-29

Embodiments of the present disclosure relate generally to systems and methods for manufacturing an airfoil component. The system can include: a geometrical mold; an elongated flexible sleeve having a closed-off interior and positioned within the geometrical mold, wherein the elongated flexible sleeve is further positioned to have a desired geometry; an infusing channel in fluid communication with the closed-off interior of the elongated flexible sleeve and configured to communicate a resinous material thereto; a vacuum channel in fluid communication with the closed-off interior of the elongated flexible sleeve and configured to vacuum seal the closed-off interior of the elongated flexible sleeve; and a glass fiber layer positioned within the closed-off interior of the elongated flexible sleeve.

Probing with and into fingerprints.

PubMed

Dahiya, Ravinder S; Gori, Monica

2010-07-01

A recent report by Scheibert et al. highlights the role of fingerprints in enhancing tactile sensitivity. By scanning a surface with a biometric force sensor they demonstrate the dominance of the frequencies that fall within the optimal sensitivity range of Pacinian afferents. The sensor, in this study, has a soft cover patterned with parallel ridges-mimicking the fingerprints. However, the skin structure is quite complex. Elasticity of the skin varies with depth and the ridge like pattern is comprised of not just papillary ridges or fingerprints. Besides fingerprints there exist intermediate ridges, positioned exactly under the papillary ridges, and limiting ridges at dermis-epidermis junction. These structures are usually considered as single unit. If so, it is important to revisit and see if the role of fingerprints remains the same, should the sensor cover have both fingerprints and intermediate ridges.

Response of the soil physical properties to restoration techniques in limestone quarries

NASA Astrophysics Data System (ADS)

Luna Ramos, Lourdes; Miralles Mellado, Isabel; Vignozzi, Nadia; Solé-Benet, Albert

2016-04-01

The devastating effects of soil erosion in mining areas from arid/semiarid environments have prompted efforts geared toward an improvement of the soil physical conditions for a fast establishment of vegetal cover. Restoration practices that increase soil moisture content are essential in drylands where rainfall is irregular or insufficient in order to accelerate ecological restoration. The aim of this study was to analyse the influence of organic amendments and mulches on the soil porosity as well as their impact on infiltration, five years after the beginning of an experimental restoration from limestone quarries in Sierra de Gádor (Almería, SE Spain). Nine plots 15 x 5 m were prepared at the site in a completely randomized 2 x 3 factorial design. The first factor, organic amendment, had three levels: sewage sludge (SA), compost from domestic organic residues (CA) and no amendment (NA). The second factor, mulches, also had three levels: gravel (GM), woodchip (WM) and no mulch (NM). In each experimental plot 75 native plants (Macrochloa tenacissima, Anthyllis terniflora and Anthyllis cytisoides) were planted. Infiltration was determined from rainfall simulations and soil porosity was assessed by image analysis of soil thin sections. Total porosity and pores distribution were measured according to pore shape (regular, irregular and elongated) and size (transmission pores [50-500 μm] and fissures [>500 μm]). Natural undisturbed soils around the mine area were used as a reference soil (RS). Restoration treatments showed higher total porosity, fissures and elongated pores than RS and we observed the highest values in treatments with WM. This fact is due to the disruption caused by the application of treatments rather that a good soil structure. Each combination exhibited different values of transmission pores, being greater in the combinations of NA-GM, SA-NM and CA-WM. Infiltration increased with the increase of the total porosity, fissures and elongated pores, especially in treatments with organic amendments and woodchip mulch. While in plots with this mulch, the wetting front only reaches a few centimetres in depth. This was probably due to the preferential orientation of woodchips pores parallel to the soil surface, which decreases the percolation to deeper soil layers. Neither treatment reached a wetting front like RS but, in view of the parameters related to good physical soil properties (pores distribution, infiltration and wetting front depth) the combination of SA-NM can allow a high soil moisture content to facilitate the plant cover establishment. It is right to conclude that sewage sludge is the most adequate treatment for restoring areas degraded by mining activities in a semiarid climate.

The Pikes Peak batholith, Colorado front range, and a model for the origin of the gabbro-anorthosite-syenite-potassic granite suite

USGS Publications Warehouse

Barker, F.; Wones, D.R.; Sharp, W.N.; Desborough, G.A.

1975-01-01

This study of the Pikes Peak batholith includes the mineralogy and petrology of quartz syenite at West Creek and of fayalite-bearing and fayalite-free biotite granite near Mount Rosa; major element chemistry of the batholith; comparisons with similar postorogenic, intracratonic, sodic to potassic intrusives; and genesis of the batholith. The batholith is elongate in plan, 50 by 100 km, composite, and generally subalkalic. It was emplaced at shallow depth 1,040 m. y. ago, sharply transects its walls and may have breached its roof. Biotite granite and biotite-hornblende granite are predominant; quartz syenite, fayalite granite and riebeckite granite are present in minor amounts. Fayalite-bearing and fayalite-free quartz syenite, fayalite-biotite granite and riebeckite granite show a well-defined sodic differentiation trend; the less sodic fayalite-free granites exhibit a broader compositional range and no sharp trends. Crystallization was largely at PH2O < Ptotal; PH2O approached Ptotal only at late stages. Aplite residual to fayalite-free biotite granite in the north formed at about 1,500 bars, or 5 km depth. Feldspar assemblages indicate late stages of crystallization at about 720??C. In the south ilmenite and manganian fayalite indicate fO2 of 10-17 or 10-18 bars. Biotite and fayalite compositions and the 'granite minimum' imply completion of crystallization at about 700??C and 1,500 bars. Nearby fayalite-free biotite granite crystallized at higher water fugacity. All types of syenite and granite contain 5-6% K2O through a range of SiO2 of 63-76%. Average Na2O percentages in quartz syenite are 6.2, fayalite granite 4.2, and fayalite-free granite 3.3 MgO contents are low, 0.03-0.4%; FeO averages 1.9-2.5%. FeO/Fe2O3 ratios are high. Fluorine ranges from 0.3 to 0.6%. The Pikes Peak intrusives are similar in mode of emplacement, composition, and probably genesis to rapakivi intrusives of Finland, the Younger Granites of Nigeria, Cape Ann Granite and Beverly Syenite, Mass., and syenite of Kungnat, Greenland, among others - allowing for different levels of erosion. A suite that includes gabbro or basalt, anorthosite, quartz syenite, fayalite granite, riebeckite granite, and biotite and/or hornblende granites is of worldwide occurrence. A model is proposed in which mantle-derived, convecting alkali olivine basaltic magma first reacts with K2O-poor lower crust of granulite facies to produce magma of quartz syenitic composition. The syenitic liquid in turn reacts with granodioritic to granitic intermediate crust of amphibolite facies to produce the predominant fayalite-free biotite and biotite-hornblende granites of the batholith. This reaction of magma and roof involves both partial melting and the reconstitution and precipitation of refractory phases, as Bowen proposed. Intermediate liquids include MgO-depleted and Na2O-enriched gabbro, which precipitated anorthosite, and alkali diorite. The heat source is the basaltic magma; the heat required for partial melting of the roof is supplied largely by heats of crystallization of phases that settle out of the liquid - mostly olivine, clinopyroxene and plagioclase. ?? 1975.

Patterns of cell elongation in the determination of the final shape in galls of Baccharopelma dracunculifoliae (Psyllidae) on Baccharis dracunculifolia DC (Asteraceae).

PubMed

Magalhães, Thiago Alves; de Oliveira, Denis Coelho; Suzuki, Aline Yasko Marinho; Isaias, Rosy Mary dos Santos

2014-07-01

Cell redifferentiation, division, and elongation are recurrent processes, which occur during gall development, and are dependent on the cellulose microfibrils reorientation. We hypothesized that changes in the microfibrils orientation from non-galled tissues to galled ones occur and determine the final gall shape. This determination is caused by a new tissue zonation, its hyperplasia, and relative cell hypertrophy. The impact of the insect's activity on these patterns of cell development was herein tested in Baccharopelma dracunculifoliae-Baccharis dracunculifolia system. In this system, the microfibrils are oriented perpendicularly to the longest cell axis in elongated cells and randomly in isodiametric ones, either in non-galled or in galled tissues. The isodiametric cells of the abaxial epidermis in non-galled tissues divided and elongated periclinally, forming the outer gall epidermis. The anticlinally elongated cells of the abaxial palisade layer and the isodiametric cells of the spongy parenchyma originated the gall outer cortex with hypertrophied and periclinally elongated cells. The anticlinally elongated cells of the adaxial palisade layer originated the inner cortex with hypertrophied and periclinally elongated cells in young and mature galls and isodiametric cells in senescent galls. The isodiametric cells of the adaxial epidermis elongated periclinally in the inner gall epidermis. The current investigation demonstrates the role of cellulose microfibril reorientation for gall development. Once many factors other than this reorientation act on gall development, it should be interesting to check the possible relationship of the new cell elongation patterns with the pectic composition of the cell walls.

Mechanisms of Regulating Tissue Elongation in Drosophila Wing: Impact of Oriented Cell Divisions, Oriented Mechanical Forces, and Reduced Cell Size

PubMed Central

Li, Yingzi; Naveed, Hammad; Kachalo, Sema; Xu, Lisa X.; Liang, Jie

2014-01-01

Regulation of cell growth and cell division plays fundamental roles in tissue morphogenesis. However, the mechanisms of regulating tissue elongation through cell growth and cell division are still not well understood. The wing imaginal disc of Drosophila provides a model system that has been widely used to study tissue morphogenesis. Here we use a recently developed two-dimensional cellular model to study the mechanisms of regulating tissue elongation in Drosophila wing. We simulate the effects of directional cues on tissue elongation. We also computationally analyze the role of reduced cell size. Our simulation results indicate that oriented cell divisions, oriented mechanical forces, and reduced cell size can all mediate tissue elongation, but they function differently. We show that oriented cell divisions and oriented mechanical forces act as directional cues during tissue elongation. Between these two directional cues, oriented mechanical forces have a stronger influence than oriented cell divisions. In addition, we raise the novel hypothesis that reduced cell size may significantly promote tissue elongation. We find that reduced cell size alone cannot drive tissue elongation. However, when combined with directional cues, such as oriented cell divisions or oriented mechanical forces, reduced cell size can significantly enhance tissue elongation in Drosophila wing. Furthermore, our simulation results suggest that reduced cell size has a short-term effect on cell topology by decreasing the frequency of hexagonal cells, which is consistent with experimental observations. Our simulation results suggest that cell divisions without cell growth play essential roles in tissue elongation. PMID:24504016

ATFL elongation after Brostrom procedure: a biomechanical investigation.

PubMed

Kirk, Kevin L; Campbell, John T; Guyton, Gregory P; Parks, Brent G; Schon, Lew C

2008-11-01

Elongation of ligaments during early mobilization after reconstruction may be associated with decreased stability. We evaluated elongation of the anterior talofibular ligament (ATFL) before and after lateral ligament reconstruction within a physiologic range of motion with protected and unprotected, isolated dorsiflexion/plantarflexion range of motion. Six fresh frozen cadaver legs were used with the ATFL meticulously dissected. A differential variable reluctance transducer (DVRT) was spaced to span the course of the ATFL using consistent placement points based on previous reports. Elongation was measured in a load frame with protected motion of 30 degrees plantarflexion and 10 degrees dorsiflexion for the intact and sectioned ATFL and for the repaired specimen with and without protected motion. The proximal DVRT anchor point was detached for sectioning and repair of the ATFL and replaced at the same position. Testing was 1000 cycles at 1 Hz for the repaired protected specimen and 10 cycles at 1 Hz for all other stages. Initial elongation in the unprotected, repaired group was significantly higher than initial elongation in the intact (p < 0.01), sectioned (p = 0.02), and repaired, protected (p < 0.01) groups. Final elongation in the unprotected repaired group was also higher than final elongation in all other groups (p < 0.01 for all comparisons). The use of protected range of motion of the ankle after lateral ankle ligament reconstruction was not associated with elongation of the ATFL. The ATFL elongated significantly by comparison without protected dorsiflexion/plantarflexion. The study provides biomechanical support for the safety of early protected dorsiflexion/plantarflexion range of motion after Broström reconstruction.

Is location of burns related to outcome? A comparison between burns on extremities and burns on head and/or trunk in patients with low to intermediate TBSA in a burn center in The Netherlands.

PubMed

Menger, Tirsa; Krijnen, Pieta; Tuinebreijer, Willem E; Breederveld, Roelf S

2014-01-01

In the literature no study was found about the effect of location of burns on outcome. The objective of this retrospective study was to investigate the effect of location on outcome parameters of 371 patients, admitted to our burn center from January 2009 to December 2011. The patients were included in the study if more than 80% of the burn(s) was localized either on the extremities or on the head and/or trunk. Two groups of TBSA were elaborated, low: 0 to 5% and intermediate: 5 to 15%. Two-hundred ninety-two patients (78.7%) had a low TBSA (<5%) and 79 (21.3%) an intermediate TBSA (5-15%). None of the included patients died. The patients with an intermediate TBSA were on average 8.0 days longer admitted compared with the patients with a low TBSA adjusted for age and depth (95% confidence interval: 6.5-9.4). The patients with burns on the head and/or trunk were more often admitted to the intensive care unit, mostly as a result of suspected inhalation injury (6.2 vs 0.9%; P = .008). More complications were seen in the intermediate TBSA group. In this study no difference in outcome was found between burns on the head and/or trunk or on extremities. The patients with burns on the head and/or trunk group are more frequently admitted to intensive care.