Science.gov

Sample records for end-to-end spectrum reconstruction

  1. Left circumflex artery aneurysm: the end-to-end reconstruction.

    PubMed

    Cuttone, Fabio; Guilbeau-Frugier, Céline; Roncalli, Jérome; Glock, Yves

    2015-08-01

    This report describes a surgical myocardial revascularization procedure for a huge, atherosclerotic left circumflex coronary artery aneurysm. The technique proposed in this paper is based on the isolation of the aneurysm followed by the aneurysmectomy and a complete reconstruction of the circumflex artery by an end-to-end anastomosis.

  2. End-to-end ductal anastomosis in biliary reconstruction: indications and limitations.

    PubMed

    Jabłonska, Beata

    2014-08-01

    End-to-end ductal anastomosis is a physiologic biliary reconstruction that is commonly used in liver transplantation and less frequently in the surgical treatment of iatrogenic bile duct injuries. Currently, end-to-end ductal anastomosis is the biliary reconstruction of choice for liver transplantation in most adult patients. In recent years, it has also been performed for liver transplantation in children and in select patients with primary sclerosing cholangitis. The procedure is also performed in some patients with iatrogenic bile duct injuries, as it establishes physiologic bile flow. Proper digestion and absorption as well as postoperative endoscopic access are possible in patients who undergo end-to-end ductal anastomosis. It allows endoscopic diagnostic and therapeutic procedures in patients following surgery. This anastomosis is technically simple and associated with fewer early postoperative complications than the Roux-en-Y hepaticojejunostomy; however, end-to-end ductal anastomosis is not possible to perform in all patients. This review discusses the indications for and limitations of this biliary reconstruction, the technique used in liver transplantation and surgical repair of injured bile ducts, suture types and use of a T-tube.

  3. Comparison of Reconstruction and Control algorithms on the ESO end-to-end simulator OCTOPUS

    NASA Astrophysics Data System (ADS)

    Montilla, I.; Béchet, C.; Lelouarn, M.; Correia, C.; Tallon, M.; Reyes, M.; Thiébaut, É.

    Extremely Large Telescopes are very challenging concerning their Adaptive Optics requirements. Their diameters, the specifications demanded by the science for which they are being designed for, and the planned use of Extreme Adaptive Optics systems, imply a huge increment in the number of degrees of freedom in the deformable mirrors. It is necessary to study new reconstruction algorithms to implement the real time control in Adaptive Optics at the required speed. We have studied the performance, applied to the case of the European ELT, of three different algorithms: the matrix-vector multiplication (MVM) algorithm, considered as a reference; the Fractal Iterative Method (FrIM); and the Fourier Transform Reconstructor (FTR). The algorithms have been tested on ESO's OCTOPUS software, which simulates the atmosphere, the deformable mirror, the sensor and the closed-loop control. The MVM is the default reconstruction and control method implemented in OCTOPUS, but it scales in O(N2) operations per loop so it is not considered as a fast algorithm for wave-front reconstruction and control on an Extremely Large Telescope. The two other methods are the fast algorithms studied in the E-ELT Design Study. The performance, as well as their response in the presence of noise and with various atmospheric conditions, has been compared using a Single Conjugate Adaptive Optics configuration for a 42 m diameter ELT, with a total amount of 5402 actuators. Those comparisons made on a common simulator allow to enhance the pros and cons of the various methods, and give us a better understanding of the type of reconstruction algorithm that an ELT demands.

  4. End-to-End Commitment

    NASA Technical Reports Server (NTRS)

    Newcomb, John

    2004-01-01

    The end-to-end test would verify the complex sequence of events from lander separation to landing. Due to the large distances involved and the significant delay time in sending a command and receiving verification, the lander needed to operate autonomously after it separated from the orbiter. It had to sense conditions, make decisions, and act accordingly. We were flying into a relatively unknown set of conditions-a Martian atmosphere of unknown pressure, density, and consistency to land on a surface of unknown altitude, and one which had an unknown bearing strength.

  5. TROPOMI end-to-end performance studies

    NASA Astrophysics Data System (ADS)

    Voors, Robert; de Vries, Johan; Veefkind, Pepijn; Gloudemans, Annemieke; Mika, Àgnes; Levelt, Pieternel

    2008-10-01

    The TROPOspheric Monitoring Instrument (TROPOMI) is a UV/VIS/NIR/SWIR non-scanning nadir viewing imaging spectrometer that combines a wide swath (110°) with high spatial resolution (8 x 8 km). Its main heritages are from the Ozone Monitoring Instrument (OMI) and from SCIAMACHY. Since its launch in 2004 OMI has been providing, on a daily basis and on a global scale, a wealth of data on ozone, NO2 and minor trace gases, aerosols and local pollution, a scanning spectrometer launched in 2004. The TROPOMI UV/VIS/NIR and SWIR heritage is a combination of OMI and SCIAMACHY. In the framework of development programs for a follow-up mission for the successful Ozone Monitoring Instrument, we have developed the so-called TROPOMI Integrated Development Environment. This is a GRID based software simulation tool for OMI follow-up missions. It includes scene generation, an instrument simulator, a level 0-1b processing chain, as well as several level 1b-2 processing chains. In addition it contains an error-analyzer, i.e. a tool to feedback the level 2 results to the input of the scene generator. The paper gives a description of the TROPOMI instrument and focuses on design aspects as well as on the performance, as tested in the end-to-end development environment TIDE.

  6. Applying Trustworthy Computing to End-to-End Electronic Voting

    ERIC Educational Resources Information Center

    Fink, Russell A.

    2010-01-01

    "End-to-End (E2E)" voting systems provide cryptographic proof that the voter's intention is captured, cast, and tallied correctly. While E2E systems guarantee integrity independent of software, most E2E systems rely on software to provide confidentiality, availability, authentication, and access control; thus, end-to-end integrity is not…

  7. Applying Trustworthy Computing to End-to-End Electronic Voting

    ERIC Educational Resources Information Center

    Fink, Russell A.

    2010-01-01

    "End-to-End (E2E)" voting systems provide cryptographic proof that the voter's intention is captured, cast, and tallied correctly. While E2E systems guarantee integrity independent of software, most E2E systems rely on software to provide confidentiality, availability, authentication, and access control; thus, end-to-end integrity is not…

  8. End-to-end attraction of duplex DNA

    PubMed Central

    Maffeo, Christopher; Luan, Binquan; Aksimentiev, Aleksei

    2012-01-01

    Recent experiments [Nakata, M. et al., End-to-end stacking and liquid crystal condensation of 6 to 20 basepair DNA duplexes. Science 2007; 318:1276–1279] have demonstrated spontaneous end-to-end association of short duplex DNA fragments into long rod-like structures. By means of extensive all-atom molecular dynamic simulations, we characterized end-to-end interactions of duplex DNA, quantitatively describing the forces, free energy and kinetics of the end-to-end association process. We found short DNA duplexes to spontaneously aggregate end-to-end when axially aligned in a small volume of monovalent electrolyte. It was observed that electrostatic repulsion of 5′-phosphoryl groups promoted the formation of aggregates in a conformation similar to the B-form DNA double helix. Application of an external force revealed that rupture of the end-to-end assembly occurs by the shearing of the terminal base pairs. The standard binding free energy and the kinetic rates of end-to-end association and dissociation processes were estimated using two complementary methods: umbrella sampling simulations of two DNA fragments and direct observation of the aggregation process in a system containing 458 DNA fragments. We found the end-to-end force to be short range, attractive, hydrophobic and only weakly dependent on the ion concentration. The relation between the stacking free energy and end-to-end attraction is discussed as well as possible roles of the end-to-end interaction in biological and nanotechnological systems. PMID:22241779

  9. Standardizing an End-to-end Accounting Service

    NASA Technical Reports Server (NTRS)

    Greenberg, Edward; Kazz, Greg

    2006-01-01

    Currently there are no space system standards available for space agencies to accomplish end-to-end accounting. Such a standard does not exist for spacecraft operations nor for tracing the relationship between the mission planning activities, the command sequences designed to perform those activities, the commands formulated to initiate those activities and the mission data and specifically the mission data products created by those activities. In order for space agencies to cross-support one another for data accountability/data tracing and for inter agency spacecraft to interoperate with each other, an international CCSDS standard for end-to-end data accountability/tracing needs to be developed. We will first describe the end-to-end accounting service model and functionality that supports the service. This model will describe how science plans that are ultimately transformed into commands can be associated with the telemetry products generated as a result of their execution. Moreover, the interaction between end-to-end accounting and service management will be explored. Finally, we will show how the standard end-to-end accounting service can be applied to a real life flight project i.e., the Mars Reconnaissance Orbiter project.

  10. Standardizing an End-to-end Accounting Service

    NASA Technical Reports Server (NTRS)

    Greenberg, Edward; Kazz, Greg

    2006-01-01

    Currently there are no space system standards available for space agencies to accomplish end-to-end accounting. Such a standard does not exist for spacecraft operations nor for tracing the relationship between the mission planning activities, the command sequences designed to perform those activities, the commands formulated to initiate those activities and the mission data and specifically the mission data products created by those activities. In order for space agencies to cross-support one another for data accountability/data tracing and for inter agency spacecraft to interoperate with each other, an international CCSDS standard for end-to-end data accountability/tracing needs to be developed. We will first describe the end-to-end accounting service model and functionality that supports the service. This model will describe how science plans that are ultimately transformed into commands can be associated with the telemetry products generated as a result of their execution. Moreover, the interaction between end-to-end accounting and service management will be explored. Finally, we will show how the standard end-to-end accounting service can be applied to a real life flight project i.e., the Mars Reconnaissance Orbiter project.

  11. End-to-end azido-pinned interlocking lanthanide squares.

    PubMed

    Li, Xiao-Lei; Wu, Jianfeng; Zhao, Lang; Shi, Wei; Cheng, Peng; Tang, Jinkui

    2017-03-09

    A rare end-to-end azido-pinned interlocking lanthanide square was self-assembled using a ditopic Schiff-base (H2L) and NaN3 as ligands. Obvious ferromagnetic interaction and a record anisotropy barrier of 152(4) K among lanthanide azido-bridged SMMs in a zero dc field were observed.

  12. Combining Simulation Tools for End-to-End Trajectory Optimization

    NASA Technical Reports Server (NTRS)

    Whitley, Ryan; Gutkowski, Jeffrey; Craig, Scott; Dawn, Tim; Williams, Jacobs; Stein, William B.; Litton, Daniel; Lugo, Rafael; Qu, Min

    2015-01-01

    Trajectory simulations with advanced optimization algorithms are invaluable tools in the process of designing spacecraft. Due to the need for complex models, simulations are often highly tailored to the needs of the particular program or mission. NASA's Orion and SLS programs are no exception. While independent analyses are valuable to assess individual spacecraft capabilities, a complete end-to-end trajectory from launch to splashdown maximizes potential performance and ensures a continuous solution. In order to obtain end-to-end capability, Orion's in-space tool (Copernicus) was made to interface directly with the SLS's ascent tool (POST2) and a new tool to optimize the full problem by operating both simulations simultaneously was born.

  13. End-to-end simulations for the LISA Technology Package

    NASA Astrophysics Data System (ADS)

    Hannen, V. M.; Smit, M.; Hoyng, P.; Selig, A.; Schleicher, A.

    2003-05-01

    We present an end-to-end simulation facility which has been developed in the framework of the LISA Technology Package (LTP) architect study for SMART-2, the technology demonstration mission that precedes LISA. The simulator evolves positions and orientations of the spacecraft and two test masses contained in the inertial sensors of LTP under the influence of external and internal forces and torques and under the influence of control loops for satellite drag-free control (DFC) and electrostatic test mass suspension. Altogether, a coupled system with 18 degrees of freedom is solved numerically. A series of test runs has been performed to verify the correct functioning of the various models contained in the end-to-end simulator and to provide a preliminary assessment of the performance of DFC algorithms and control laws for test mass suspension, which are currently foreseen for use in the basic operation mode of LTP.

  14. LWS/SET End-to-End Data System

    NASA Technical Reports Server (NTRS)

    Giffin, Geoff; Sherman, Barry; Colon, Gilberto (Technical Monitor)

    2002-01-01

    This paper describes the concept for the End-to-End Data System that will support NASA's Living With a Star Space Environment Testbed missions. NASA has initiated the Living With a Star (LWS) Program to develop a better scientific understanding to address the aspects of the connected Sun-Earth system that affect life and society. A principal goal of the program is to bridge the gap.between science, engineering, and user application communities. The Space Environment Testbed (SET) Project is one element of LWS. The Project will enable future science, operational, and commercial objectives in space and atmospheric environments by improving engineering approaches to the accommodation and/or mitigation of the effects of solar variability on technological systems. The End-to-end data system allows investigators to access the SET control center, command their experiments, and receive data from their experiments back at their home facility, using the Internet. The logical functioning of major components of the end-to-end data system are described, including the GSFC Payload Operations Control Center (POCC), SET Payloads, the GSFC SET Simulation Lab, SET Experiment PI Facilities, and Host Systems. Host Spacecraft Operations Control Centers (SOCC) and the Host Spacecraft are essential links in the end-to-end data system, but are not directly under the control of the SET Project. Formal interfaces will be established between these entities and elements of the SET Project. The paper describes data flow through the system, from PI facilities connecting to the SET operations center via the Internet, communications to SET carriers and experiments via host systems, to telemetry returns to investigators from their flight experiments. It also outlines the techniques that will be used to meet mission requirements, while holding development and operational costs to a minimum. Additional information is included in the original extended abstract.

  15. Measurements and analysis of end-to-end Internet dynamics

    SciTech Connect

    Paxson, Vern

    1997-04-01

    Accurately characterizing end-to-end Internet dynamics - the performance that a user actually obtains from the lengthy series of network links that comprise a path through the Internet - is exceptionally difficult, due to the network`s immense heterogeneity. At the heart of this work is a `measurement framework` in which a number of sites around the Internet host a specialized measurement service. By coordinating `probes` between pairs of these sites one can measure end-to-end behavior along O(N2) paths for a framework consisting of N sites. Consequently, one obtains a superlinear scaling that allows measuring a rich cross-section of Internet behavior without requiring huge numbers of observation points. 37 sites participated in this study, allowing the author to measure more than 1,000 distinct Internet paths. The first part of this work looks at the behavior of end-to-end routing: the series of routers over which a connection`s packets travel. Based on 40,000 measurements made using this framework, the author analyzes: routing `pathologies` such as loops, outages, and flutter; the stability of routes over time; and the symmetry of routing along the two directions of an end-to-end path. The author finds that pathologies increased significantly over the course of 1995 and that Internet paths are heavily dominated by a single route. The second part of this work studies end-to-end Internet packet dynamics. The author analyzes 20,000 TCP transfers of 100 Kbyte each to investigate the performance of both the TCP endpoints and the Internet paths. The measurements used for this part of the study are much richer than those for the first part, but require a great degree of attention to issues of calibration, which are addressed by applying self-consistency checks to the measurements whenever possible. The author finds that packet filters are capable of a wide range of measurement errors, some of which, if undetected, can significantly taint subsequent analysis.

  16. End-to-end network/application performance troubleshooting methodology

    SciTech Connect

    Wu, Wenji; Bobyshev, Andrey; Bowden, Mark; Crawford, Matt; Demar, Phil; Grigaliunas, Vyto; Grigoriev, Maxim; Petravick, Don; /Fermilab

    2007-09-01

    The computing models for HEP experiments are globally distributed and grid-based. Obstacles to good network performance arise from many causes and can be a major impediment to the success of the computing models for HEP experiments. Factors that affect overall network/application performance exist on the hosts themselves (application software, operating system, hardware), in the local area networks that support the end systems, and within the wide area networks. Since the computer and network systems are globally distributed, it can be very difficult to locate and identify the factors that are hurting application performance. In this paper, we present an end-to-end network/application performance troubleshooting methodology developed and in use at Fermilab. The core of our approach is to narrow down the problem scope with a divide and conquer strategy. The overall complex problem is split into two distinct sub-problems: host diagnosis and tuning, and network path analysis. After satisfactorily evaluating, and if necessary resolving, each sub-problem, we conduct end-to-end performance analysis and diagnosis. The paper will discuss tools we use as part of the methodology. The long term objective of the effort is to enable site administrators and end users to conduct much of the troubleshooting themselves, before (or instead of) calling upon network and operating system 'wizards,' who are always in short supply.

  17. Constructing end-to-end models using ECOPATH data

    NASA Astrophysics Data System (ADS)

    Steele, John H.; Ruzicka, James J.

    2011-09-01

    The wide availability of ECOPATH data sets provides a valuable resource for the comparative analysis of marine ecosystems. We show how to derive a bottom-up transform from the top-down ECOPATH; couple this to a simple microbial web with physical forcing; and use the end-to-end model (E2E) for scenario construction. This steady state format also provides a framework and initial conditions for different dynamic simulations. This model can be applied to shelf ecosystems with a wide range of physical forcing, coupled benthic/pelagic food webs, and nutrient recycling. We illustrate the general application and the specific problems by transforming an ECOPATH model for the Northern California Current (NCC). We adapt results on the upwelling regime to provide estimates of physical fluxes and use these to show the consequences of different upwelling rates combined with variable retention mechanism for plankton, for the productivity of fish and other top predators; and for the resilience of the ecosystem. Finally we show how the effects of inter-annual to decadal variations in upwelling on fishery yields can be studied using dynamic simulations with different prey-predator relations. The general conclusion is that the nature of the physical regimes for shelf ecosystems cannot be ignored in comparing end-to-end representations of these food webs.

  18. On routing algorithms with end-to-end delay guarantees

    SciTech Connect

    Rao, N.S.V.; Batsell, S.G.

    1998-11-01

    The authors consider the transmission of a message of size r from a source to a destination with guarantees on the end-to-end delay over a computer network with n nodes and m links. There are three sources of delays: (a) propagation delays along the links, (b) delays due to bandwidth availability on the links, and (c) queuing delays at the intermediate nodes. First, the authors consider that delays on various links and nodes are given as functions of the message size. If the delay in (b) is a non-increasing function of the bandwidth, they propose O(m{sup 2} + mn log n) time algorithm to compute a path with the minimum end-to-end delay for any given message size r. They then consider that the queuing delay in (c) is a random variable correlated with the message size according to an unknown distribution. At each node, the measurements of queuing delays and message sizes are available. They propose two algorithms to compute paths whose delays are close to optimal delays with a high probability, irrespective of the distribution of the delays, and based entirely on the measurements of sufficient size.

  19. Cyberinfrastructure for End-to-End Environmental Explorations

    NASA Astrophysics Data System (ADS)

    Merwade, V.; Kumar, S.; Song, C.; Zhao, L.; Govindaraju, R.; Niyogi, D.

    2007-12-01

    The design and implementation of a cyberinfrastructure for End-to-End Environmental Exploration (C4E4) is presented. The C4E4 framework addresses the need for an integrated data/computation platform for studying broad environmental impacts by combining heterogeneous data resources with state-of-the-art modeling and visualization tools. With Purdue being a TeraGrid Resource Provider, C4E4 builds on top of the Purdue TeraGrid data management system and Grid resources, and integrates them through a service-oriented workflow system. It allows researchers to construct environmental workflows for data discovery, access, transformation, modeling, and visualization. Using the C4E4 framework, we have implemented an end-to-end SWAT simulation and analysis workflow that connects our TeraGrid data and computation resources. It enables researchers to conduct comprehensive studies on the impact of land management practices in the St. Joseph watershed using data from various sources in hydrologic, atmospheric, agricultural, and other related disciplines.

  20. The CarbonSat End-to-End Simulator

    NASA Astrophysics Data System (ADS)

    Bramstedt, Klaus; Noel, Stefan; Bovensmann, Heinrich; Reuter, Max; Burrows, John P.; Jurado Lozano, Pedro Jose; Meijer, Yasjka; Loescher, Armin; Acarreta, Juan R.; Sturm, Philipp; Tesmer, Volker; Sanchez Monero, Ana Maria; Atapuerca Rodreiguez de Dios, Francisco Javier; Toledano Sanchez, Daniel; Boesch, Hartmut

    2016-08-01

    The objective of the CarbonSat mission is to improve our knowledge on natural and anthropogenic sources and sinks of CO2 and CH4. CarbonSat was one of the two candidate missions selected for definition studies for becoming Earth Explorer 8 (EE8).The CarbonSat End-to-End Simulator (CSE2ES) simulates the full data flow of the mission with a set of modules embedded in ESA's generic simulation framework OpenSF. A Geometry Module (GM) defines the orbital geometry and related parameters. A Scene Generation Module (SGM) provides simulated radiances and irradiances for the selected scenes. The Level 1 Module (L1M) compromises the instrument simulator and the Level 1b processor, and provide as main output calibrated spectra. The L1M is implemented in two versions, reflecting the instrument concepts from the two competing industrial system studies. The Level 2 Retrieval Module (L2M) performs the retrieval from the input level 1b spectra to the atmospheric parameters (CO2 and CH4).In this paper, we show sensitivity studies with respect to atmospheric parameters, simulations along the orbit and a case study for the detection of a point source emitting carbon dioxide. In summary, the end-to-end simulation with CSE2ES proves the capability of the CarbonSat concept to reach its requirements.

  1. Miniature modular microwave end-to-end receiver

    NASA Technical Reports Server (NTRS)

    Sukamto, Lin M. (Inventor); Cooley, Thomas W. (Inventor); Janssen, Michael A. (Inventor); Parks, Gary S. (Inventor)

    1993-01-01

    An end-to-end microwave receiver system contained in a single miniature hybrid package mounted on a single heatsink is presented. It includes an input end connected to a microwave receiver antenna and an output end which produces a digital count proportional to the amplitude of a signal of a selected microwave frequency band received at the antenna and corresponding to one of the water vapor absorption lines near frequencies of 20 GHz or 30 GHz. The hybrid package is on the order of several centimeters in length and a few centimeters in height and width. The package includes an L-shaped carrier having a base surface, a vertical wall extending up from the base surface and forming a corner therewith, and connection pins extending through the vertical wall. Modular blocks rest on the base surface against the vertical wall and support microwave monolithic integrated circuits on top surfaces thereof connected to the external connection pins. The modular blocks lie end-to-end on the base surface so as to be modularly removable by sliding along the base surface beneath the external connection pins away from the vertical wall.

  2. Toward End-to-End Face Recognition Through Alignment Learning

    NASA Astrophysics Data System (ADS)

    Zhong, Yuanyi; Chen, Jiansheng; Huang, Bo

    2017-08-01

    Plenty of effective methods have been proposed for face recognition during the past decade. Although these methods differ essentially in many aspects, a common practice of them is to specifically align the facial area based on the prior knowledge of human face structure before feature extraction. In most systems, the face alignment module is implemented independently. This has actually caused difficulties in the designing and training of end-to-end face recognition models. In this paper we study the possibility of alignment learning in end-to-end face recognition, in which neither prior knowledge on facial landmarks nor artificially defined geometric transformations are required. Specifically, spatial transformer layers are inserted in front of the feature extraction layers in a Convolutional Neural Network (CNN) for face recognition. Only human identity clues are used for driving the neural network to automatically learn the most suitable geometric transformation and the most appropriate facial area for the recognition task. To ensure reproducibility, our model is trained purely on the publicly available CASIA-WebFace dataset, and is tested on the Labeled Face in the Wild (LFW) dataset. We have achieved a verification accuracy of 99.08\\% which is comparable to state-of-the-art single model based methods.

  3. Euclid end-to-end straylight performance assessment

    NASA Astrophysics Data System (ADS)

    Gaspar Venancio, Luis M.; Pachot, Charlotte; Carminati, Lionel; Lorenzo Alvarez, Jose; Amiaux, Jérôme; Prieto, Eric; Bonino, Luciana; Salvignol, Jean-Christophe; Short, Alex; Boenke, Tobias; Strada, Paulo; Laureijs, Rene

    2016-07-01

    In the Euclid mission the straylight has been identified at an early stage as the main driver for the final imaging quality of the telescope. The assessment by simulation of the final straylight in the focal plane of both instruments in Euclid's payload have required a complex workflow involving all stakeholders in the mission, from industry to the scientific community. The straylight is defined as a Normalized Detector Irradiance (NDI) which is a convenient definition tool to separate the contributions of the telescope and of the instruments. The end-to-end straylight of the payload is then simply the sum of the NDIs of the telescope and of each instrument. The NDIs for both instruments are presented in this paper for photometry and spectrometry.

  4. An end to end secure CBIR over encrypted medical database.

    PubMed

    Bellafqira, Reda; Coatrieux, Gouenou; Bouslimi, Dalel; Quellec, Gwenole

    2016-08-01

    In this paper, we propose a new secure content based image retrieval (SCBIR) system adapted to the cloud framework. This solution allows a physician to retrieve images of similar content within an outsourced and encrypted image database, without decrypting them. Contrarily to actual CBIR approaches in the encrypted domain, the originality of the proposed scheme stands on the fact that the features extracted from the encrypted images are themselves encrypted. This is achieved by means of homomorphic encryption and two non-colluding servers, we however both consider as honest but curious. In that way an end to end secure CBIR process is ensured. Experimental results carried out on a diabetic retinopathy database encrypted with the Paillier cryptosystem indicate that our SCBIR achieves retrieval performance as good as if images were processed in their non-encrypted form.

  5. Direct muscle neurotization after end-to end and end-to-side neurorrhaphy

    PubMed Central

    Papalia, Igor; Ronchi, Giulia; Muratori, Luisa; Mazzucco, Alessandra; Magaudda, Ludovico; Geuna, Stefano

    2012-01-01

    The need for the continuous research of new tools for improving motor function recovery after nerve injury is justified by the still often unsatisfactory clinical outcome in these patients. It has been previously shown that the combined use of two reconstructive techniques, namely end-to-side neurorrhaphy and direct muscle neurotization in the rat hindlimb model, can lead to good results in terms of skeletal muscle reinnervation. Here we show that, in the rat forelimb model, the combined use of direct muscle neurotization with either end-to-end or end-to-side neurorrhaphy to reinnervate the denervated flexor digitorum muscles, leads to muscle atrophy prevention over a long postoperative time lapse (10 months). By contrast, very little motor recovery (in case of end-to-end neurorrhaphy) and almost no motor recovery (in case of end-to-side neurorrhaphy) were observed in the grasping activity controlled by flexor digitorum muscles. It can thus be concluded that, at least in the rat, direct muscle neurotization after both end-to-end and end-to-side neurorrhaphy represents a good strategy for preventing denervation-related muscle atrophy but not for regaining the lost motor function. PMID:25538749

  6. Response to MRO's end-to-end data accountability challenges

    NASA Technical Reports Server (NTRS)

    Lee, Young H.

    2005-01-01

    (MRO) on August 12, 2005. It carries six science instruments and three engineering payloads. Because MRO will produce an unprecedented number of science products, it will transmit a much higher data volume via high data rate than any other deep space mission to date. Keeping track of MRO products as well as relay products would be a daunting, expensive task without a well-planned data-product tracking strategy. To respond to this challenge, the MRO project developed the End-to- End Data Accountability System by utilizing existing information available from both ground and flight elements. Therefore, a capability to perform first-order problem diagnosis is essential in order for MRO to answer the questions, where is my data? and when will my data be available? This paper details the approaches taken, design and implementation of the tools, procedures and teams that track data products from the time they are predicted until they arrive in the hands of the end users.

  7. Recirculating Linac Acceleration - End-to-End Simulation

    SciTech Connect

    Alex Bogacz

    2010-03-01

    A conceptual design of a high-pass-number Recirculating Linear Accelerator (RLA) for muons is presented. The scheme involves three superconducting linacs (201 MHz): a single pass linear Pre-accelerator followed by a pair multi-pass (4.5-pass) 'Dogbone' RLAs. Acceleration starts after ionization cooling at 220 MeV/c and proceeds to 12.6 GeV. The Pre-accelerator captures a large muon phase space and accelerates muons to relativistic energies, while adiabatically decreasing the phase-space volume, so that effective acceleration in the RLA is possible. The RLA further compresses and shapes up the longitudinal and transverse phase-spaces, while increasing the energy. Appropriate choice of multi-pass linac optics based on FODO focusing assures large number of passes in the RLA. The proposed 'Dogbone' configuration facilitates simultaneous acceleration of both mu± species through the requirement of mirror symmetric optics of the return 'droplet' arcs. Finally, presented end-to-end simulation validates the efficiency and acceptance of the accelerator system.

  8. Key management for large scale end-to-end encryption

    SciTech Connect

    Witzke, E.L.

    1994-07-01

    Symmetric end-to-end encryption requires separate keys for each pair of communicating confidants. This is a problem of Order N{sup 2}. Other factors, such as multiple sessions per pair of confidants and multiple encryption points in the ISO Reference Model complicate key management by linear factors. Public-key encryption can reduce the number of keys managed to a linear problem which is good for scaleability of key management, but comes with complicating issues and performance penalties. Authenticity is the primary ingredient of key management. If each potential pair of communicating confidants can authenticate data from each other, then any number of public encryption keys of any type can be communicated with requisite integrity. These public encryption keys can be used with the corresponding private keys to exchange symmetric cryptovariables for high data rate privacy protection. The Digital Signature Standard (DSS), which has been adopted by the United States Government, has both public and private components, similar to a public-key cryptosystem. The Digital Signature Algorithm of the DSS is intended for authenticity but not for secrecy. In this paper, the authors will show how the use of the Digital Signature Algorithm combined with both symmetric and asymmetric (public-key) encryption techniques can provide a practical solution to key management scaleability problems, by reducing the key management complexity to a problem of order N, without sacrificing the encryption speed necessary to operate in high performance networks.

  9. End-to-end Adversarial Retinal Image Synthesis.

    PubMed

    Costa, Pedro; Galdran, Adrian; Meyer, Maria Ines; Niemeijer, Meindert; Abramoff, Michael; Mendonca, Ana Maria; Campilho, Aurelio

    2017-10-02

    In medical image analysis applications, the availability of large amounts of annotated data is becoming increasingly critical. However, annotated medical data is often scarce and costly to obtain. In this paper, we address the problem of synthesizing retinal color images by applying recent techniques based on adversarial learning. In this setting, a generative model is trained to maximize a loss function provided by a second model attempting to classify its output into real or synthetic. In particular, we propose to implement an adversarial autoencoder for the task of retinal vessel network synthesis. We use the generated vessel trees as an intermediate stage for the generation of color retinal images, which is accomplished with a Generative Adversarial Network. Both models require the optimization of almost everywhere differentiable loss functions, which allows us to train them jointly. The resulting model offers an end-to-end retinal image synthesis system capable of generating as many retinal images as the user requires, with their corresponding vessel networks, by sampling from a simple probability distribution that we impose to the associated latent space. We show that the learned latent space contains a well-defined semantic structure, implying that we can perform calculations in the space of retinal images, e.g., smoothly interpolating new data points between two retinal images. Visual and quantitative results demonstrate that the synthesized images are substantially different from those in the training set, while being also anatomically consistent and displaying a reasonable visual quality.

  10. OGC standards for end-to-end sensor network integration

    NASA Astrophysics Data System (ADS)

    Headley, K. L.; Broering, A.; O'Reilly, T. C.; Toma, D.; Del Rio, J.; Bermudez, L. E.; Zedlitz, J.; Johnson, G.; Edgington, D.

    2010-12-01

    technology, and can communicate with any sensor whose protocol can be described by a SID. The SID interpreter transfers retrieved sensor data to a Sensor Observation Service, and transforms tasks submitted to a Sensor Planning Service to actual sensor commands. The proposed SWE PUCK protocol complements SID by providing a standard way to associate a sensor with a SID, thereby completely automating the sensor integration process. PUCK protocol is implemented in sensor firmware, and provides a means to retrieve a universally unique identifer, metadata and other information from the device itself through its communication interface. Thus the SID interpreter can retrieve a SID directly from the sensor through PUCK protocol. Alternatively the interpreter can retrieve the sensor’s SID from an external source, based on the unique sensor ID provided by PUCK protocol. In this presentation, we describe the end-to-end integration of several commercial oceanographic instruments into a sensor network using PUCK, SID and SWE services. We also present a user-friendly, graphical tool to generate SIDs and tools to visualize sensor data.

  11. A multicentre 'end to end' dosimetry audit for cervix HDR brachytherapy treatment.

    PubMed

    Palmer, Antony L; Diez, Patricia; Gandon, Laura; Wynn-Jones, Andrea; Bownes, Peter; Lee, Chris; Aird, Edwin; Bidmead, Margaret; Lowe, Gerry; Bradley, David; Nisbet, Andrew

    2015-02-01

    To undertake the first multicentre fully 'end to end' dosimetry audit for HDR cervix brachytherapy, comparing planned and delivered dose distributions around clinical treatment applicators, with review of local procedures. A film-dosimetry audit was performed at 46 centres, including imaging, applicator reconstruction, treatment planning and delivery. Film dose maps were calculated using triple-channel dosimetry and compared to RTDose data from treatment planning systems. Deviations between plan and measurement were quantified at prescription Point A and using gamma analysis. Local procedures were also discussed. The mean difference between planned and measured dose at Point A was -0.6% for plastic applicators and -3.0% for metal applicators, at standard uncertainty 3.0% (k=1). Isodose distributions agreed within 1mm over a dose range 2-16Gy. Mean gamma passing rates exceeded 97% for plastic and metal applicators at 3% (local) 2mm criteria. Two errors were found: one dose normalisation error and one applicator library misaligned with the imaged applicator. Suggestions for quality improvement were also made. The concept of 'end to end' dosimetry audit for HDR brachytherapy has been successfully implemented in a multicentre environment, providing evidence that a high level of accuracy in brachytherapy dosimetry can be achieved. Copyright © 2015 Elsevier Ireland Ltd. All rights reserved.

  12. Data analysis pipeline for EChO end-to-end simulations

    NASA Astrophysics Data System (ADS)

    Waldmann, Ingo P.; Pascale, E.

    2015-12-01

    Atmospheric spectroscopy of extrasolar planets is an intricate business. Atmospheric signatures typically require a photometric precision of 1×10-4 in flux over several hours. Such precision demands high instrument stability as well as an understanding of stellar variability and an optimal data reduction and removal of systematic noise. In the context of the EChO mission concept, we here discuss the data reduction and analysis pipeline developed for the EChO end-to-end simulator EChOSim. We present and discuss the step by step procedures required in order to obtain the final exoplanetary spectrum from the EChOSim `raw data' using a simulated observation of the secondary eclipse of the hot-Neptune 55 Cnc e.

  13. End-to-End Optimization of High-Throughput DNA Sequencing.

    PubMed

    O'Reilly, Eliza; Baccelli, Francois; De Veciana, Gustavo; Vikalo, Haris

    2016-10-01

    At the core of Illumina's high-throughput DNA sequencing platforms lies a biophysical surface process that results in a random geometry of clusters of homogeneous short DNA fragments typically hundreds of base pairs long-bridge amplification. The statistical properties of this random process and the lengths of the fragments are critical as they affect the information that can be subsequently extracted, that is, density of successfully inferred DNA fragment reads. The ensembles of overlapping DNA fragment reads are then used to computationally reconstruct the much longer target genome sequence. The success of the reconstruction in turn depends on having a sufficiently large ensemble of DNA fragments that are sufficiently long. In this article using stochastic geometry, we model and optimize the end-to-end flow cell synthesis and target genome sequencing process, linking and partially controlling the statistics of the physical processes to the success of the final computational step. Based on a rough calibration of our model, we provide, for the first time, a mathematical framework capturing the salient features of the sequencing platform that serves as a basis for optimizing cost, performance, and/or sensitivity analysis to various parameters.

  14. Vascular Coupling System for End-to-End Anastomosis: An In Vivo Pilot Case Report.

    PubMed

    Li, Huizhong; Gale, Bruce; Shea, Jill; Sant, Himanshu; Terry, Christi M; Agarwal, Jay

    2017-03-01

    This paper presents the latest in vivo findings of a novel vascular coupling system. Vascular anastomosis is a common procedure in reconstructive surgeries and traditional hand suturing is very time consuming. The vascular coupling system described herein was designed to be used on arteries for a rapid and error-free anastomosis. The system consists of an engaging ring made from high density polyethylene using computer numerical control machining and a back ring made from polymethylmethacrylate using laser cutting. The vascular coupling system and its corresponding installation tools were tested in a pilot animal study to evaluate their efficacy in completing arterial anastomosis. A segment of expanded polytetrafluoroethylene (ePTFE) tubing was interposed into a transected carotid artery by anastomosis using two couplers in a pig. Two end-to-end anastomoses were accomplished. Ultrasound images were obtained to evaluate the blood flow at the anastomotic site immediately after the surgery. MRI was also performed 2 weeks after the surgery to evaluate vessel and ePTFE graft patency. This anastomotic system demonstrated high efficacy and easy usability, which should facilitate vascular anastomosis procedures in trauma and reconstructive surgeries.

  15. Experimental demonstration of software defined data center optical networks with Tbps end-to-end tunability

    NASA Astrophysics Data System (ADS)

    Zhao, Yongli; Zhang, Jie; Ji, Yuefeng; Li, Hui; Wang, Huitao; Ge, Chao

    2015-10-01

    The end-to-end tunability is important to provision elastic channel for the burst traffic of data center optical networks. Then, how to complete the end-to-end tunability based on elastic optical networks? Software defined networking (SDN) based end-to-end tunability solution is proposed for software defined data center optical networks, and the protocol extension and implementation procedure are designed accordingly. For the first time, the flexible grid all optical networks with Tbps end-to-end tunable transport and switch system have been online demonstrated for data center interconnection, which are controlled by OpenDayLight (ODL) based controller. The performance of the end-to-end tunable transport and switch system has been evaluated with wavelength number tuning, bit rate tuning, and transmit power tuning procedure.

  16. Understanding TCP over TCP: effects of TCP tunneling on end-to-end throughput and latency

    NASA Astrophysics Data System (ADS)

    Honda, Osamu; Ohsaki, Hiroyuki; Imase, Makoto; Ishizuka, Mika; Murayama, Junichi

    2005-10-01

    TCP tunnel is a technology that aggregates and transfers packets sent between end hosts as a single TCP connection. By using a TCP tunnel, the fairness among aggregated flows can be improved and several protocols can be transparently transmitted through a firewall. Currently, many applications such as SSH, VTun, and HTun use a TCP tunnel. However, since most applications running on end hosts generally use TCP, two TCP congestion controls (i.e., end-to-end TCP and tunnel TCP) operate simultaneously and interfere each other. Under certain conditions, it has been known that using a TCP tunnel severely degrades the end-to-end TCP performance. Namely, it has known that using a TCP tunnel drastically degrades the end-to-end TCP throughput for some time, which is called TCP meltdown problem. On the contrary, under other conditions, it has been known that using a TCP tunnel significantly improves the end-to-end TCP performance. However, it is still an open issue --- how, when, and why is a TCP tunnel malicious for end-to-end TCP performance? In this paper, we therefore investigate effect of TCP tunnel on end-to-end TCP performance using simulation experiments. Specifically, we quantitatively reveal effects of several factors (e.g., the propagation delay, usage of SACK option, TCP socket buffer size, and sender buffer size of TCP tunnel) on performance of end-to-end TCP and tunnel TCP.

  17. Direct end-to-end repair of flexor pollicis longus tendon lacerations.

    PubMed

    Nunley, J A; Levin, L S; Devito, D; Goldner, R D; Urbaniak, J R

    1992-01-01

    Between 1976 and 1986, 38 consecutive acute isolated flexor pollicis longus lacerations were repaired. This study excluded all replanted or mutilated digits and all lacerations with associated fracture. Average follow-up was 26 months. Tendon rehabilitation was standardized. Range of motion and pinch strength were measured postoperatively. Seventy-four percent (28/38) of the flexor pollicis longus injuries occurred in zone II. Neurovascular injury occurred in 82% of the lacerations, and this correlated with the zone of tendon injury. In 21% of the patients (8/38) both digital nerves and arteries were transected. Postoperative thumb interphalangeal motion averaged 35 degrees and key pinch strength was 81% that of the uninjured thumb. One rupture occurred in a child. Laceration of the flexor pollicis longus is likely to involve damage to neurovascular structures, and repair may be necessary. Direct end-to-end repairs within the pulley system do at least as well as delayed tendon reconstruction and do not require additional procedures.

  18. MRI simulation: end-to-end testing for prostate radiation therapy using geometric pelvic MRI phantoms

    NASA Astrophysics Data System (ADS)

    Sun, Jidi; Dowling, Jason; Pichler, Peter; Menk, Fred; Rivest-Henault, David; Lambert, Jonathan; Parker, Joel; Arm, Jameen; Best, Leah; Martin, Jarad; Denham, James W.; Greer, Peter B.

    2015-04-01

    To clinically implement MRI simulation or MRI-alone treatment planning requires comprehensive end-to-end testing to ensure an accurate process. The purpose of this study was to design and build a geometric phantom simulating a human male pelvis that is suitable for both CT and MRI scanning and use it to test geometric and dosimetric aspects of MRI simulation including treatment planning and digitally reconstructed radiograph (DRR) generation. A liquid filled pelvic shaped phantom with simulated pelvic organs was scanned in a 3T MRI simulator with dedicated radiotherapy couch-top, laser bridge and pelvic coil mounts. A second phantom with the same external shape but with an internal distortion grid was used to quantify the distortion of the MR image. Both phantoms were also CT scanned as the gold-standard for both geometry and dosimetry. Deformable image registration was used to quantify the MR distortion. Dose comparison was made using a seven-field IMRT plan developed on the CT scan with the fluences copied to the MR image and recalculated using bulk electron densities. Without correction the maximum distortion of the MR compared with the CT scan was 7.5 mm across the pelvis, while this was reduced to 2.6 and 1.7 mm by the vendor’s 2D and 3D correction algorithms, respectively. Within the locations of the internal organs of interest, the distortion was <1.5 and <1 mm with 2D and 3D correction algorithms, respectively. The dose at the prostate isocentre calculated on CT and MRI images differed by 0.01% (1.1 cGy). Positioning shifts were within 1 mm when setup was performed using MRI generated DRRs compared to setup using CT DRRs. The MRI pelvic phantom allows end-to-end testing of the MRI simulation workflow with comparison to the gold-standard CT based process. MRI simulation was found to be geometrically accurate with organ dimensions, dose distributions and DRR based setup within acceptable limits compared to CT.

  19. Effects of collagen membranes enriched with in vitro-differentiated N1E-115 cells on rat sciatic nerve regeneration after end-to-end repair

    PubMed Central

    2010-01-01

    Peripheral nerves possess the capacity of self-regeneration after traumatic injury but the extent of regeneration is often poor and may benefit from exogenous factors that enhance growth. The use of cellular systems is a rational approach for delivering neurotrophic factors at the nerve lesion site, and in the present study we investigated the effects of enwrapping the site of end-to-end rat sciatic nerve repair with an equine type III collagen membrane enriched or not with N1E-115 pre-differentiated neural cells. After neurotmesis, the sciatic nerve was repaired by end-to-end suture (End-to-End group), end-to-end suture enwrapped with an equine collagen type III membrane (End-to-EndMemb group); and end-to-end suture enwrapped with an equine collagen type III membrane previously covered with neural cells pre-differentiated in vitro from N1E-115 cells (End-to-EndMembCell group). Along the postoperative, motor and sensory functional recovery was evaluated using extensor postural thrust (EPT), withdrawal reflex latency (WRL) and ankle kinematics. After 20 weeks animals were sacrificed and the repaired sciatic nerves were processed for histological and stereological analysis. Results showed that enwrapment of the rapair site with a collagen membrane, with or without neural cell enrichment, did not lead to any significant improvement in most of functional and stereological predictors of nerve regeneration that we have assessed, with the exception of EPT which recovered significantly better after neural cell enriched membrane employment. It can thus be concluded that this particular type of nerve tissue engineering approach has very limited effects on nerve regeneration after sciatic end-to-end nerve reconstruction in the rat. PMID:20149260

  20. End-to-End Models for Effects of System Noise on LIMS Analysis of Igneous Rocks

    SciTech Connect

    Clegg, Samuel M; Bender, Steven; Wiens, R. C.; Carmosino, Marco L; Speicher, Elly A; Dyar, M. D.

    2010-12-23

    The ChemCam instrument on the Mars Science Laboratory will be the first extraterrestial deployment of laser-induced breakdown spectroscopy (UBS) for remote geochemical analysis. LIBS instruments are also being proposed for future NASA missions. In quantitative LIBS applications using multivariate analysis techniques, it is essential to understand the effects of key instrument parameters and their variability on the elemental predictions. Baseline experiments were run on a laboratory instrument in conditions reproducing ChemCam performance on Mars. These experiments employed Nd:YAG laser producing 17 mJ/pulse on target and an with a 200 {micro}m FWHM spot size on the surface of a sample. The emission is collected by a telescope, imaged on a fiber optic and then interfaced to a demultiplexer capable of >40% transmission into each spectrometer. We report here on an integrated end-to-end system performance model that simulates the effects of output signal degradation that might result from the input signal chain and the impact on multivariate model predictions. There are two approaches to modifying signal to noise (SNR): degrade the signal and/or increase the noise. Ishibashi used a much smaller data set to show that the addition of noise had significant impact while degradation of spectral resolution had much less impact on accuracy and precision. Here, we specifically focus on aspects of remote LIBS instrument performance as they relate to various types of signal degradation. To assess the sensitivity of LIBS analysis to signal-to-noise ratio (SNR) and spectral resolution, the signal in each spectrum from a suite of 50 laboratory spectra of igneous rocks was variably degraded by increasing the peak widths (simulating misalignment) and decreasing the spectral amplitude (simulating decreases in SNR).

  1. A NASA Climate Model Data Services (CDS) End-to-End System to Support Reanalysis Intercomparison

    NASA Astrophysics Data System (ADS)

    Carriere, L.; Potter, G. L.; McInerney, M.; Nadeau, D.; Shen, Y.; Duffy, D.; Schnase, J. L.; Maxwell, T. P.; Huffer, E.

    2014-12-01

    The NASA Climate Model Data Service (CDS) and the NASA Center for Climate Simulation (NCCS) are collaborating to provide an end-to-end system for the comparative study of the major Reanalysis projects, currently, ECMWF ERA-Interim, NASA/GMAO MERRA, NOAA/NCEP CFSR, NOAA/ESRL 20CR, and JMA JRA25. Components of the system include the full spectrum of Climate Model Data Services; Data, Compute Services, Data Services, Analytic Services and Knowledge Services. The Data includes standard Reanalysis model output, and will be expanded to include gridded observations, and gridded Innovations (O-A and O-F). The NCCS High Performance Science Cloud provides the compute environment (storage, servers, and network). Data Services are provided through an Earth System Grid Federation (ESGF) data node complete with Live Access Server (LAS), Web Map Service (WMS) and Ultrascale Visualization Climate Data Analysis Tools (UV-CDAT) for visualization, as well as a collaborative interface through the Earth System CoG. Analytic Services include UV-CDAT for analysis and MERRA/AS, accessed via the CDS API, for computation services, both part of the CDS Climate Analytics as a Service (CAaaS). Knowledge Services include access to an Ontology browser, ODISEES, for metadata search and data retrieval. The result is a system that provides the ability for both reanalysis scientists and those scientists in need of reanalysis output to identify the data of interest, compare, compute, visualize, and research without the need for transferring large volumes of data, performing time consuming format conversions, and writing code for frequently run computations and visualizations.

  2. End-to-End Information System design at the NASA Jet Propulsion Laboratory

    NASA Technical Reports Server (NTRS)

    Hooke, A. J.

    1978-01-01

    Recognizing a pressing need of the 1980s to optimize the two-way flow of information between a ground-based user and a remote space-based sensor, an end-to-end approach to the design of information systems has been adopted at the Jet Propulsion Laboratory. The objectives of this effort are to ensure that all flight projects adequately cope with information flow problems at an early stage of system design, and that cost-effective, multi-mission capabilities are developed when capital investments are made in supporting elements. The paper reviews the End-to-End Information System (EEIS) activity at the Laboratory, and notes the ties to the NASA End-to-End Data System program.

  3. An end-to-end communications architecture for condition-based maintenance applications

    NASA Astrophysics Data System (ADS)

    Kroculick, Joseph

    2014-06-01

    This paper explores challenges in implementing an end-to-end communications architecture for Condition-Based Maintenance Plus (CBM+) data transmission which aligns with the Army's Network Modernization Strategy. The Army's Network Modernization strategy is based on rolling out network capabilities which connect the smallest unit and Soldier level to enterprise systems. CBM+ is a continuous improvement initiative over the life cycle of a weapon system or equipment to improve the reliability and maintenance effectiveness of Department of Defense (DoD) systems. CBM+ depends on the collection, processing and transport of large volumes of data. An important capability that enables CBM+ is an end-to-end network architecture that enables data to be uploaded from the platform at the tactical level to enterprise data analysis tools. To connect end-to-end maintenance processes in the Army's supply chain, a CBM+ network capability can be developed from available network capabilities.

  4. End-to-End Information System design at the NASA Jet Propulsion Laboratory

    NASA Technical Reports Server (NTRS)

    Hooke, A. J.

    1978-01-01

    Recognizing a pressing need of the 1980s to optimize the two-way flow of information between a ground-based user and a remote space-based sensor, an end-to-end approach to the design of information systems has been adopted at the Jet Propulsion Laboratory. The objectives of this effort are to ensure that all flight projects adequately cope with information flow problems at an early stage of system design, and that cost-effective, multi-mission capabilities are developed when capital investments are made in supporting elements. The paper reviews the End-to-End Information System (EEIS) activity at the Laboratory, and notes the ties to the NASA End-to-End Data System program.

  5. Measuring End-To-End Bandwidth with Iperf Using Web100

    SciTech Connect

    Cottrell, Les

    2003-04-30

    End-to-end bandwidth estimation tools like Iperf though fairly accurate are intrusive. In this paper, we describe how with an instrumented TCP stack (Web100), we can estimate the end-to-end bandwidth accurately, while consuming significantly less network bandwidth and time. We modified Iperf to use Web100 to detect the end of slow-start and estimate the end-to-end bandwidth by measuring the amount of data sent for a short period (1 second) after the slow-start, when the TCP throughput is relatively stable. We obtained bandwidth estimates differing by less than 10% when compared to running Iperf for 20 seconds, and savings in bandwidth estimation time of up to 94% and savings in network traffic of up to 92%.

  6. A Robust Method to Integrate End-to-End Mission Architecture Optimization Tools

    NASA Technical Reports Server (NTRS)

    Lugo, Rafael; Litton, Daniel; Qu, Min; Shidner, Jeremy; Powell, Richard

    2016-01-01

    End-to-end mission simulations include multiple phases of flight. For example, an end-to-end Mars mission simulation may include launch from Earth, interplanetary transit to Mars and entry, descent and landing. Each phase of flight is optimized to meet specified constraints and often depend on and impact subsequent phases. The design and optimization tools and methodologies used to combine different aspects of end-to-end framework and their impact on mission planning are presented. This work focuses on a robust implementation of a Multidisciplinary Design Analysis and Optimization (MDAO) method that offers the flexibility to quickly adapt to changing mission design requirements. Different simulations tailored to the liftoff, ascent, and atmospheric entry phases of a trajectory are integrated and optimized in the MDAO program Isight, which provides the user a graphical interface to link simulation inputs and outputs. This approach provides many advantages to mission planners, as it is easily adapted to different mission scenarios and can improve the understanding of the integrated system performance within a particular mission configuration. A Mars direct entry mission using the Space Launch System (SLS) is presented as a generic end-to-end case study. For the given launch period, the SLS launch performance is traded for improved orbit geometry alignment, resulting in an optimized a net payload that is comparable to that in the SLS Mission Planner's Guide.

  7. End-to-End Data System Architecture for the Space Station Biological Research Project

    NASA Technical Reports Server (NTRS)

    Mian, Arshad; Scimemi, Sam; Adeni, Kaiser; Picinich, Lou; Ramos, Rubin (Technical Monitor)

    1998-01-01

    The Space Station Biological Research Project (SSBRP) Is developing hardware referred to as the "facility" for providing life sciences research capability on the International Space Station. This hardware includes several biological specimen habitats, habitat holding racks, a centrifuge and a glovebox. An SSBRP end to end data system architecture has been developed to allow command and control of the facility from the ground, either with crew assistance or autonomously. The data system will be capable of handling commands, sensor data, and video from multiple cameras. The data will traverse through several onboard and ground networks and processing entities including the SSBRP and Space Station onboard and ground data systems. A large number of onboard and ground (,entities of the data system are being developed by the Space Station Program, other NASA centers and the International Partners. The SSBRP part of the system which includes the habitats, holding racks, and the ground operations center, User Operations Facility (UOF) will be developed by a multitude of geographically distributed development organizations. The SSBRP has the responsibility to define the end to end data and communications systems to make the interfaces manageable and verifiable with multiple contractors with widely varying development constraints and schedules. This paper provides an overview of the SSBRP end-to-end data system. Specifically, it describes the hardware, software and functional interactions of individual systems, and interface requirements among various entities of the end-to-end system.

  8. Scalable end-to-end encryption technology for supra-gigabit/second networking

    SciTech Connect

    Pierson, L.G.; Tarman, T.D.; Witzke, E.L.

    1997-05-01

    End-to-end encryption can protect proprietary information as it passes through a complex inter-city computer network, even if the intermediate systems are untrusted. This technique involves encrypting the body of computer messages while leaving network addressing and control information unencrypted for processing by intermediate network nodes. Because high speed implementations of end-to-end encryption with easy key management for standard network protocols are unavailable, this technique is not widely used today. Specifically, no end-to-end encryptors exist to protect Asynchronous Transfer Mode (ATM) traffic, nor to protect Switched Multi-megabit Data Service (SMDS), which is the first ``Broadband Integrated Services Digital Network`` (BISDN) service now being used by long distance telephone companies. This encryption technology is required for the protection of data in transit between industrial sites and central Massively Parallel Supercomputing Centers over high bandwidth, variable bit rate (BISDN) services. This research effort investigated techniques to scale end-to-end encryption technology from today`s state of the art ({approximately} 0.001 Gb/s) to 2.4 Gb/s and higher. A cryptosystem design has been developed which scales for implementation beyond SONET OC-48 (2.4Gb/s) data rates. A prototype for use with OC-3 (0.155 Gb/s) ATM variable bit rate services was developed.

  9. An end-to-end vechicle classification pipeline using vibrometry data

    NASA Astrophysics Data System (ADS)

    Smith, Ashley; Mendoza-Schrock, Olga; Kangas, Scott; Dierking, Matthew; Shaw, Arnab

    2014-06-01

    This paper evaluates and expands upon the existing end-to-end process used for vibrometry target classification and identification. A fundamental challenge in vehicle classification using vibrometry signature data is the determination of robust signal features. The methodology used in this paper involves comparing the performance of features taken from automatic speech recognition, seismology, and structural analysis work. These features provide a means to reduce the dimensionality of the data for the possibility of improved separability. The performances of different groups of features are compared to determine the best feature set for vehicle classification. Standard performance metrics are implemented to provide a method of evaluation. The contribution of this paper is to (1) thoroughly explain the time domain and frequency domain features that have been recently applied to the vehicle classification using laser-vibrometry data domain, (2) build an end-to-end classification pipeline for Aided Target Recognition (ATR) with common and easily accessible tools, and (3) apply feature selection methods to the end-to-end pipeline. The end-to-end process used here provides a structured path for accomplishing vibrometry-based target identification. This paper will compare with two studies in the public domain. The techniques utilized in this paper were utilized to analyze a small in-house database of several different vehicles.

  10. Space Debris End to End Service - presentation of the DLR work plan

    NASA Astrophysics Data System (ADS)

    Alwes, D.

    2001-10-01

    Resulting from the present effort on international regulations and the compilation of guidelines to handle the space debris problem in the future, the need consists to advise spacecraft manufacturer, suppliers and operators ideally in the form of a commercially useful End to End Service. The competence of German institutions incl. research institutes and companies in the field of the space debris research and risk analyses is widely recognized and very well suitable to deal with all the corresponding aspects in Germany but also Europe-wide. It is the intention of DLR to concentrate and link all expertises and competences, available in Germany, in one coherent project. The space industry should contribute to risk analyses, reviews of guidelines and to proposals for space debris minimising design and operations of spacecraft. Preliminary proposals by several institutes and companies have been prepared and have been compiled to a consolidated work plan for a project named 'Space Debris End to End Service'. 'End to End' means the consideration of space debris mitigation aspects from begin of the design over the operational phase of a spacecraft up to the end of the mission and the following phase of the initiation of space debris avoidance measures (e.g. passivation, de- or re-orbiting). The effectiveness of such an End to End Service shall be demonstrated on a satellite project. The work packages of the project shall cover in principle the following activities: Conception of an End to End Service - Identification of national needs, the state of knowledge and information - Spacecraft requirements and mitigation measures - Re-entry analyses - Application on a pilot project, incl. system review, meteoroid and space debris modelling, hazard analyses, recommendations of measures and a cost to benefit analysis. This paper reports about the work plan and the status of the project.

  11. Development and evaluation of an end-to-end test for head and neck IMRT with a novel multiple-dosimetric modality phantom.

    PubMed

    Zakjevskii, Viatcheslav V; Knill, Cory S; Rakowski, Joseph T; Snyder, Michael G

    2016-03-08

    A comprehensive end-to-end test for head and neck IMRT treatments was developed using a custom phantom designed to utilize multiple dosimetry devices. Initial end-to-end test and custom H&N phantom were designed to yield maximum information in anatomical regions significant to H&N plans with respect to: (i) geometric accuracy, (ii) dosimetric accuracy, and (iii) treatment reproducibility. The phantom was designed in collaboration with Integrated Medical Technologies. The phantom was imaged on a CT simulator and the CT was reconstructed with 1 mm slice thickness and imported into Varian's Eclipse treatment planning system. OARs and the PTV were contoured with the aid of Smart Segmentation. A clinical template was used to create an eight-field IMRT plan and dose was calculated with heterogeneity correction on. Plans were delivered with a TrueBeam equipped with a high definition MLC. Preliminary end-to-end results were measured using film, ion chambers, and optically stimulated luminescent dosimeters (OSLDs). Ion chamber dose measurements were compared to the treatment planning system. Films were analyzed with FilmQA Pro using composite gamma index. OSLDs were read with a MicroStar reader using a custom calibration curve. Final phantom design incorporated two axial and one coronal film planes with 18 OSLD locations adjacent to those planes as well as four locations for IMRT ionization chambers below inferior film plane. The end-to-end test was consistently reproducible, resulting in average gamma pass rate greater than 99% using 3%/3 mm analysis criteria, and average OSLD and ion chamber measurements within 1% of planned dose. After initial calibration of OSLD and film systems, the end-to-end test provides next-day results, allowing for integration in routine clinical QA. Preliminary trials have demonstrated that our end-to-end is a reproducible QA tool that enables the ongoing evaluation of dosimetric and geometric accuracy of clinical head and neck treatments.

  12. Measurement of the end-to-end distances between the femoral and tibial insertion sites of the anterior cruciate ligament during knee flexion and with rotational torque.

    PubMed

    Wang, Joon Ho; Kato, Yuki; Ingham, Sheila J M; Maeyama, Akira; Linde-Rosen, Monica; Smolinski, Patrick; Fu, Freddie H

    2012-10-01

    The aim of this study was to determine the end-to-end distance changes in anterior cruciate ligament (ACL) fibers during flexion/extension and internal/external rotation of the knee. The positional relation between the femur and tibia of 10 knees was digitized on a robotic system during flexion/extension and with an internal/external rotational torque (5 Nm). The ACL insertion site data, acquired by 3-dimensional scanning, were superimposed on the positional data. The end-to-end distances of 5 representative points on the femoral and tibial insertion sites of the ACL were calculated. The end-to-end distances of all representative points except the most anterior points were longest at full extension and shortest at 90°. The distances of the anteromedial (AM) and posterolateral (PL) bundles were 37.2 ± 2.1 mm and 27.5 ± 2.8 mm, respectively, at full extension and 34.7 ± 2.4 mm and 20.7 ± 2.3 mm, respectively, at 90°. Only 4 knees had an isometric point, which was 1 of the 3 anterior points. Under an internal torque, both bundles became longer with statistical meaning at all flexion angles (P = .005). The end-to-end distances of all points became longest with internal torque at full extension and shortest with an external torque at 90°. Only 4 of 10 specimens had an isometric point at a variable anterior point. The end-to-end distances of the AM and PL bundles were longer in extension and shorter in flexion. The nonisometric tendency of the ACL and the end-to-end distance change during knee flexion/extension and internal/external rotation should be considered during ACL reconstruction to avoid overconstraint of the graft. Copyright © 2012 Arthroscopy Association of North America. Published by Elsevier Inc. All rights reserved.

  13. End-to-end network models encompassing terrestrial, wireless, and satellite components

    NASA Astrophysics Data System (ADS)

    Boyarko, Chandler L.; Britton, John S.; Flores, Phil E.; Lambert, Charles B.; Pendzick, John M.; Ryan, Christopher M.; Shankman, Gordon L.; Williams, Ramon P.

    2004-08-01

    Development of network models that reflect true end-to-end architectures such as the Transformational Communications Architecture need to encompass terrestrial, wireless and satellite component to truly represent all of the complexities in a world wide communications network. Use of best-in-class tools including OPNET, Satellite Tool Kit (STK), Popkin System Architect and their well known XML-friendly definitions, such as OPNET Modeler's Data Type Description (DTD), or socket-based data transfer modules, such as STK/Connect, enable the sharing of data between applications for more rapid development of end-to-end system architectures and a more complete system design. By sharing the results of and integrating best-in-class tools we are able to (1) promote sharing of data, (2) enhance the fidelity of our results and (3) allow network and application performance to be viewed in the context of the entire enterprise and its processes.

  14. End-to-end RMS error testing on a constant bandwidth FM/FM system

    NASA Technical Reports Server (NTRS)

    Wallace, G. R.; Salter, W. E.

    1972-01-01

    End-to-end root-mean-square (rms) tests performed on a constant bandwidth FM/FM system with various settings of system parameters are reported. The testing technique employed is that of sampling, digitizing, delaying, and comparing the analog input against the sampled and digitized corresponding output. Total system error is determined by fully loading all channels with band-limited noise and conducting end-to-end rms error tests on one channel. Tests are also conducted with and without a transmission link and plots of rms errors versus receiver signal-to-noise (S/N) values are obtained. The combined effects of intermodulation, adjacent channel crosstalk, and residual system noise are determined as well as the single channel distortion of the system.

  15. Providing end-to-end QoS for multimedia applications in 3G wireless networks

    NASA Astrophysics Data System (ADS)

    Guo, Katherine; Rangarajan, Samapth; Siddiqui, M. A.; Paul, Sanjoy

    2003-11-01

    As the usage of wireless packet data services increases, wireless carriers today are faced with the challenge of offering multimedia applications with QoS requirements within current 3G data networks. End-to-end QoS requires support at the application, network, link and medium access control (MAC) layers. We discuss existing CDMA2000 network architecture and show its shortcomings that prevent supporting multiple classes of traffic at the Radio Access Network (RAN). We then propose changes in RAN within the standards framework that enable support for multiple traffic classes. In addition, we discuss how Session Initiation Protocol (SIP) can be augmented with QoS signaling for supporting end-to-end QoS. We also review state of the art scheduling algorithms at the base station and provide possible extensions to these algorithms to support different classes of traffic as well as different classes of users.

  16. Laser welding with an albumin stent: experimental ureteral end-to-end anastomosis

    NASA Astrophysics Data System (ADS)

    Xie, Hua; Shaffer, Brian S.; Prahl, Scott A.; Gregory, Kenton W.

    2000-05-01

    Porcine ureters were anastomosed using an albumin stent and diode laser in vitro. The albumin stent provided precise apposition for an end to end anastomosis and enhanced welding strength. The anastomosis seam was lasered with an 810 nm diode laser using continuous wave and pulse light through a hand-held 600 micrometer noncontact optical fiber. Tensile strength, burst pressures, operative times, total energy and thermal damaged were measured in this study. The results demonstrated that using an albumin stent to laser weld ureteral anastomoses produces strong weld strengths. The liquid albumin solder also provided satisfactory welding strength. There were no significant differences of tissue thermal damage between the albumin stent alone, liquid solder alone and both combination groups. Thermal damage to tissue depended on laser setting and energy. This study determined the appropriate laser setting parameters to perform in vivo ureteral end to end anastomosis.

  17. Sutureless end-to-end ureteral anastomosis using a new albumin stent and diode laser

    NASA Astrophysics Data System (ADS)

    Xie, Hua; Shaffer, Brian S.; Prahl, Scott A.; Gregory, Kenton W.

    1999-09-01

    Sutureless end to end ureteral anastomoses was successfully constructed in acute and chronic experiments. A photothermal sensitive hydrolyzable (PSH) albumin stent played roles as solder and intraluminal supporter to adhesion and position the anastomosed ureter by end to end fashion. The anastomosis seam was lased with 810 nm diode laser energy supplied through hand- held 600 micrometers noncontact optical fiber. A continuous 1 watt wave of power was applied for laser anastomosis. Integrity, welding strength, bursting pressures of anastomosis and histological reaction, and radiological phenomena were compared to those of anastomoses constructed using a liquidity soldering technique. The acute results of two methods were equivalent at welding strengths, but the liquid soldering showed more energy consumption. At chronic study, the radiological and histological studies were performed to evaluate the complications of the anastomosis. Excellent heating and varied degrees of complications were observed. We conclude that PSH stent showed great promise for ureteral anastomosis using laser welding.

  18. Radiometry simulation within the end-to-end simulation tool SENSOR

    NASA Astrophysics Data System (ADS)

    Wiest, Lorenz; Boerner, Anko

    2001-02-01

    12 An end-to-end simulation is a valuable tool for sensor system design, development, optimization, testing, and calibration. This contribution describes the radiometry module of the end-to-end simulation tool SENSOR. It features MODTRAN 4.0-based look up tables in conjunction with a cache-based multilinear interpolation algorithm to speed up radiometry calculations. It employs a linear reflectance parameterization to reduce look up table size, considers effects due to the topology of a digital elevation model (surface slope, sky view factor) and uses a reflectance class feature map to assign Lambertian and BRDF reflectance properties to the digital elevation model. The overall consistency of the radiometry part is demonstrated by good agreement between ATCOR 4-retrieved reflectance spectra of a simulated digital image cube and the original reflectance spectra used to simulate this image data cube.

  19. End-to-end calculation of the radiation characteristics of VVER-1000 spent fuel assemblies

    SciTech Connect

    Linge, I. I.; Mitenkova, E. F. Novikov, N. V.

    2012-12-15

    The results of end-to-end calculation of the radiation characteristics of VVER-1000 spent nuclear fuel are presented. Details of formation of neutron and gamma-radiation sources are analyzed. Distributed sources of different types of radiation are considered. A comparative analysis of calculated radiation characteristics is performed with the use of nuclear data from different ENDF/B and EAF files and ANSI/ANS and ICRP standards.

  20. The International Space Station Alpha (ISSA) End-to-End On-Orbit Maintenance Process Flow

    NASA Technical Reports Server (NTRS)

    Zingrebe, Kenneth W., II

    1995-01-01

    As a tool for construction and refinement of the on-orbit maintenance system to sustain the International Space Station Alpha (ISSA), the Mission Operations Directorate (MOD) developed an end to-end on-orbit maintenance process flow. This paper discusses and demonstrates that process flow. This tool is being used by MOD to identify areas which require further work in preparation for MOD's role in the conduct of on-orbit maintenance operations.

  1. Severing and end-to-end annealing of neurofilaments in neurons

    PubMed Central

    Uchida, Atsuko; Çolakoğlu, Gülsen; Wang, Lina; Monsma, Paula C.; Brown, Anthony

    2013-01-01

    We have shown previously that neurofilaments and vimentin filaments expressed in nonneuronal cell lines can lengthen by joining ends in a process known as “end-to-end annealing.” To test if this also occurs for neurofilaments in neurons, we transfected cultured rat cortical neurons with fluorescent neurofilament fusion proteins and then used photoconversion or photoactivation strategies to create distinct populations of red and green fluorescent filaments. Within several hours we observed the appearance of chimeric filaments consisting of alternating red and green segments, which is indicative of end-to-end annealing of red and green filaments. However, the appearance of these chimeric filaments was accompanied by a gradual fragmentation of the red and green filament segments, which is indicative of severing. Over time we observed a progressive increase in the number of red–green junctions along the filaments accompanied by a progressive decrease in the average length of the alternating red and green fluorescent segments that comprised those filaments, suggesting a dynamic cycle of severing and end-to-end-annealing. Time-lapse imaging of the axonal transport of chimeric filaments demonstrated that the red and green segments moved together, confirming that they were indeed part of the same filament. Moreover, in several instances, we also were able to capture annealing and severing events live in time-lapse movies. We propose that the length of intermediate filaments in cells is regulated by the opposing actions of severing and end-to-end annealing, and we speculate that this regulatory mechanism may influence neurofilament transport within axons. PMID:23821747

  2. CHEETAH: circuit-switched high-speed end-to-end transport architecture

    NASA Astrophysics Data System (ADS)

    Veeraraghavan, Malathi; Zheng, Xuan; Lee, Hyuk; Gardner, M.; Feng, Wuchun

    2003-10-01

    Leveraging the dominance of Ethernet in LANs and SONET/SDH in MANs and WANs, we propose a service called CHEETAH (Circuit-switched High-speed End-to-End Transport ArcHitecture). The service concept is to provide end hosts with high-speed, end-to-end circuit connectivity on a call-by-call shared basis, where a "circuit" consists of Ethernet segments at the ends that are mapped into Ethernet-over-SONET long-distance circuits. This paper focuses on the file-transfer application for such circuits. For this application, the CHEETAH service is proposed as an add-on to the primary Internet access service already in place for enterprise hosts. This allows an end host that is sending a file to first attempt setting up an end-to-end Ethernet/EoS circuit, and if rejected, fall back to the TCP/IP path. If the circuit setup is successful, the end host will enjoy a much shorter file-transfer delay than on the TCP/IP path. To determine the conditions under which an end host with access to the CHEETAH service should attempt circuit setup, we analyze mean file-transfer delays as a function of call blocking probability in the circuit-switched network, probability of packet loss in the IP network, round-trip times, link rates, and so on.

  3. Sulfate-Mediated End-to-End Assembly of Gold Nanorods.

    PubMed

    Abtahi, S M H; Burrows, Nathan D; Idesis, Fred A; Murphy, Catherine J; Saleh, Navid B; Vikesland, Peter J

    2017-02-14

    There is interest in the controlled aggregation of gold nanorods (GNRs) for the production of extended nanoassemblies. Prior studies have relied upon chemical modification of the GNR surface to achieve a desired final aggregate structure. Herein we illustrate that control of electrolyte composition can facilitate end-to-end assembly of cetyltrimethylammonium-bromide-coated (CTAB) GNRs. By adjusting either the sulfate anion concentration or the exposure time it is possible to connect GNRs in chain-like assemblies. In contrast, end-to-end assembly was not observed in control experiments using monovalent chloride salts. We attribute the end-to-end assembly to the localized association of sulfate with exposed quaternary ammonium head groups of CTAB at the nanorod tip. To quantify the assembly kinetics, visible-near-infrared extinction spectra were collected over a predetermined time period, and the colloidal behavior of the GNR suspensions was interpreted using plasmon band analysis. Transmission electron microscopy and atomic force microscopy results support the conclusions reached via plasmon band analysis, and the colloidal behavior is consistent with Derjaguin-Landau-Verwey-Overbeek theory.

  4. An end-to-end approach to developing biological and chemical detector requirements

    NASA Astrophysics Data System (ADS)

    Teclemariam, Nerayo P.; Purvis, Liston K.; Foltz, Greg W.; West, Todd; Edwards, Donna M.; Fruetel, Julia A.; Gleason, Nathaniel J.

    2009-05-01

    Effective defense against chemical and biological threats requires an "end-to-end" strategy that encompasses the entire problem space, from threat assessment and target hardening to response planning and recovery. A key element of the strategy is the definition of appropriate system requirements for surveillance and detection of threat agents. Our end-to-end approach to venue chem/bio defense is captured in the Facilities Weapons of Mass Destruction Decision Analysis Capability (FacDAC), an integrated system-of-systems toolset that can be used to generate requirements across all stages of detector development. For example, in the early stage of detector development the approach can be used to develop performance targets (e.g., sensitivity, selectivity, false positive rate) to provide guidance on what technologies to pursue. In the development phase, after a detector technology has been selected, the approach can aid in determining performance trade-offs and down-selection of competing technologies. During the application stage, the approach can be employed to design optimal defensive architectures that make the best use of available technology to maximize system performance. This presentation will discuss the end-to-end approach to defining detector requirements and demonstrate the capabilities of the FacDAC toolset using examples from a number of studies for the Department of Homeland Security.

  5. End-to-end System Performance Simulation: A Data-Centric Approach

    NASA Astrophysics Data System (ADS)

    Guillaume, Arnaud; Laffitte de Petit, Jean-Luc; Auberger, Xavier

    2013-08-01

    In the early times of space industry, the feasibility of Earth observation missions was directly driven by what could be achieved by the satellite. It was clear to everyone that the ground segment would be able to deal with the small amount of data sent by the payload. Over the years, the amounts of data processed by the spacecrafts have been increasing drastically, leading to put more and more constraints on the ground segment performances - and in particular on timeliness. Nowadays, many space systems require high data throughputs and short response times, with information coming from multiple sources and involving complex algorithms. It has become necessary to perform thorough end-to-end analyses of the full system in order to optimise its cost and efficiency, but even sometimes to assess the feasibility of the mission. This paper presents a novel framework developed by Astrium Satellites in order to meet these needs of timeliness evaluation and optimisation. This framework, named ETOS (for “End-to-end Timeliness Optimisation of Space systems”), provides a modelling process with associated tools, models and GUIs. These are integrated thanks to a common data model and suitable adapters, with the aim of building suitable space systems simulators of the full end-to-end chain. A big challenge of such environment is to integrate heterogeneous tools (each one being well-adapted to part of the chain) into a relevant timeliness simulation.

  6. Ocean Acidification Scientific Data Stewardship: An approach for end-to-end data management and integration

    NASA Astrophysics Data System (ADS)

    Arzayus, K. M.; Garcia, H. E.; Jiang, L.; Michael, P.

    2012-12-01

    As the designated Federal permanent oceanographic data center in the United States, NOAA's National Oceanographic Data Center (NODC) has been providing scientific stewardship for national and international marine environmental and ecosystem data for over 50 years. NODC is supporting NOAA's Ocean Acidification Program and the science community by providing end-to-end scientific data management of ocean acidification (OA) data, dedicated online data discovery, and user-friendly access to a diverse range of historical and modern OA and other chemical, physical, and biological oceanographic data. This effort is being catalyzed by the NOAA Ocean Acidification Program, but the intended reach is for the broader scientific ocean acidification community. The first three years of the project will be focused on infrastructure building. A complete ocean acidification data content standard is being developed to ensure that a full spectrum of ocean acidification data and metadata can be stored and utilized for optimal data discovery and access in usable data formats. We plan to develop a data access interface capable of allowing users to constrain their search based on real-time and delayed mode measured variables, scientific data quality, their observation types, the temporal coverage, methods, instruments, standards, collecting institutions, and the spatial coverage. In addition, NODC seeks to utilize the existing suite of international standards (including ISO 19115-2 and CF-compliant netCDF) to help our data producers use those standards for their data, and help our data consumers make use of the well-standardized metadata-rich data sets. These tools will be available through our NODC Ocean Acidification Scientific Data Stewardship (OADS) web page at http://www.nodc.noaa.gov/oceanacidification. NODC also has a goal to provide each archived dataset with a unique ID, to ensure a means of providing credit to the data provider. Working with partner institutions, such as the

  7. Optimizing End-to-End Big Data Transfers over Terabits Network Infrastructure

    SciTech Connect

    Kim, Youngjae; Atchley, Scott; Vallee, Geoffroy R.; Lee, Sangkeun; Shipman, Galen M.

    2016-04-05

    While future terabit networks hold the promise of significantly improving big-data motion among geographically distributed data centers, significant challenges must be overcome even on today's 100 gigabit networks to realize end-to-end performance. Multiple bottlenecks exist along the end-to-end path from source to sink, for instance, the data storage infrastructure at both the source and sink and its interplay with the wide-area network are increasingly the bottleneck to achieving high performance. In this study, we identify the issues that lead to congestion on the path of an end-to-end data transfer in the terabit network environment, and we present a new bulk data movement framework for terabit networks, called LADS. LADS exploits the underlying storage layout at each endpoint to maximize throughput without negatively impacting the performance of shared storage resources for other users. LADS also uses the Common Communication Interface (CCI) in lieu of the sockets interface to benefit from hardware-level zero-copy, and operating system bypass capabilities when available. It can further improve data transfer performance under congestion on the end systems using buffering at the source using flash storage. With our evaluations, we show that LADS can avoid congested storage elements within the shared storage resource, improving input/output bandwidth, and data transfer rates across the high speed networks. We also investigate the performance degradation problems of LADS due to I/O contention on the parallel file system (PFS), when multiple LADS tools share the PFS. We design and evaluate a meta-scheduler to coordinate multiple I/O streams while sharing the PFS, to minimize the I/O contention on the PFS. Finally, with our evaluations, we observe that LADS with meta-scheduling can further improve the performance by up to 14 percent relative to LADS without meta-scheduling.

  8. End-to-end modeling: a new modular and flexible approach

    NASA Astrophysics Data System (ADS)

    Genoni, M.; Riva, M.; Landoni, M.; Pariani, G.

    2016-08-01

    In this paper we present an innovative philosophy to develop the End-to-End model for astronomical observation projects, i.e. the architecture which allows physical modeling of the whole system from the light source to the reduced data. This alternative philosophy foresees the development of the physical model of the different modules, which compose the entire End-to-End system, directly during the project design phase. This approach is strongly characterized by modularity and flexibility; these aspects will be of relevant importance in the next generation astronomical observation projects like E-ELT (European Extremely Large Telescope) because of the high complexity and long-time design and development. With this approach it will be possible to keep the whole system and its different modules efficiently under control during every project phase and to exploit a reliable tool at a system engineering level to evaluate the effects on the final performance both of the main parameters and of different instrument architectures and technologies. This philosophy will be important to allow scientific community to perform in advance simulations and tests on the scientific drivers. This will translate in a continuous feedback to the (system) design process with a resulting improvement in the effectively achievable scientific goals and consistent tool for efficiently planning observation proposals and programs. We present the application case for this End-to-End modeling technique, which is the high resolution spectrograph at the E-ELT (E-ELT HIRES). In particular we present the definition of the system modular architecture, describing the interface parameters of the modules.

  9. Optimizing End-to-End Big Data Transfers over Terabits Network Infrastructure

    DOE PAGES

    Kim, Youngjae; Atchley, Scott; Vallee, Geoffroy R.; ...

    2016-04-05

    While future terabit networks hold the promise of significantly improving big-data motion among geographically distributed data centers, significant challenges must be overcome even on today's 100 gigabit networks to realize end-to-end performance. Multiple bottlenecks exist along the end-to-end path from source to sink, for instance, the data storage infrastructure at both the source and sink and its interplay with the wide-area network are increasingly the bottleneck to achieving high performance. In this study, we identify the issues that lead to congestion on the path of an end-to-end data transfer in the terabit network environment, and we present a new bulkmore » data movement framework for terabit networks, called LADS. LADS exploits the underlying storage layout at each endpoint to maximize throughput without negatively impacting the performance of shared storage resources for other users. LADS also uses the Common Communication Interface (CCI) in lieu of the sockets interface to benefit from hardware-level zero-copy, and operating system bypass capabilities when available. It can further improve data transfer performance under congestion on the end systems using buffering at the source using flash storage. With our evaluations, we show that LADS can avoid congested storage elements within the shared storage resource, improving input/output bandwidth, and data transfer rates across the high speed networks. We also investigate the performance degradation problems of LADS due to I/O contention on the parallel file system (PFS), when multiple LADS tools share the PFS. We design and evaluate a meta-scheduler to coordinate multiple I/O streams while sharing the PFS, to minimize the I/O contention on the PFS. Finally, with our evaluations, we observe that LADS with meta-scheduling can further improve the performance by up to 14 percent relative to LADS without meta-scheduling.« less

  10. End-to-End Comparative Attention Networks for Person Re-Identification

    NASA Astrophysics Data System (ADS)

    Liu, Hao; Feng, Jiashi; Qi, Meibin; Jiang, Jianguo; Yan, Shuicheng

    2017-07-01

    Person re-identification across disjoint camera views has been widely applied in video surveillance yet it is still a challenging problem. One of the major challenges lies in the lack of spatial and temporal cues, which makes it difficult to deal with large variations of lighting conditions, viewing angles, body poses and occlusions. Recently, several deep learning based person re-identification approaches have been proposed and achieved remarkable performance. However, most of those approaches extract discriminative features from the whole frame at one glimpse without differentiating various parts of the persons to identify. It is essentially important to examine multiple highly discriminative local regions of the person images in details through multiple glimpses for dealing with the large appearance variance. In this paper, we propose a new soft attention based model, i.e., the end to-end Comparative Attention Network (CAN), specifically tailored for the task of person re-identification. The end-to-end CAN learns to selectively focus on parts of pairs of person images after taking a few glimpses of them and adaptively comparing their appearance. The CAN model is able to learn which parts of images are relevant for discerning persons and automatically integrates information from different parts to determine whether a pair of images belongs to the same person. In other words, our proposed CAN model simulates the human perception process to verify whether two images are from the same person. Extensive experiments on three benchmark person re-identification datasets, including CUHK01, CHUHK03 and Market-1501, clearly demonstrate that our proposed end-to-end CAN for person re-identification outperforms well established baselines significantly and offer new state-of-the-art performance.

  11. LWIR scene simulator developed for end-to-end performance evaluation of focal planes

    NASA Technical Reports Server (NTRS)

    Thompson, Niels A.; Bowser, William M.; Song, Sung H.; Skiff, Laura T.; Powell, William W.; Romero, Charles

    1992-01-01

    The development of a long-wave infrared optical simulator facilitates evaluation of the end-to-end performance of long wavelength infrared (LWIR) focal plane arrays (FPAs) in a system-like environment. This simulator provides selectable structured scene inputs to a focal plane module or array. Background irradiances as low as 10 exp 10 photons/sq cm s are achievable when the simulator is cooled with liquid helium. The optical simulator can generate single or multiple targets of controllable intensities, and uniform or structured background irradiances. The infrared scenes can be viewed in a stationary mode or dynamically scanned across the focal plane.

  12. Screening California Current fishery management scenarios using the Atlantis end-to-end ecosystem model

    NASA Astrophysics Data System (ADS)

    Kaplan, Isaac C.; Horne, Peter J.; Levin, Phillip S.

    2012-09-01

    End-to-end marine ecosystem models link climate and oceanography to the food web and human activities. These models can be used as forecasting tools, to strategically evaluate management options and to support ecosystem-based management. Here we report the results of such forecasts in the California Current, using an Atlantis end-to-end model. We worked collaboratively with fishery managers at NOAA’s regional offices and staff at the National Marine Sanctuaries (NMS) to explore the impact of fishery policies on management objectives at different spatial scales, from single Marine Sanctuaries to the entire Northern California Current. In addition to examining Status Quo management, we explored the consequences of several gear switching and spatial management scenarios. Of the scenarios that involved large scale management changes, no single scenario maximized all performance metrics. Any policy choice would involve trade-offs between stakeholder groups and policy goals. For example, a coast-wide 25% gear shift from trawl to pot or longline appeared to be one possible compromise between an increase in spatial management (which sacrificed revenue) and scenarios such as the one consolidating bottom impacts to deeper areas (which did not perform substantially differently from Status Quo). Judged on a coast-wide scale, most of the scenarios that involved minor or local management changes (e.g. within Monterey Bay NMS only) yielded results similar to Status Quo. When impacts did occur in these cases, they often involved local interactions that were difficult to predict a priori based solely on fishing patterns. However, judged on the local scale, deviation from Status Quo did emerge, particularly for metrics related to stationary species or variables (i.e. habitat and local metrics of landed value or bycatch). We also found that isolated management actions within Monterey Bay NMS would cause local fishers to pay a cost for conservation, in terms of reductions in landed

  13. End-to-end science from major facilities: does the VO have a role?

    NASA Astrophysics Data System (ADS)

    Gilmore, Gerard F.

    2007-08-01

    The Virtual Observatory provides a natural solution to the existence problem in communications: how can one ask a question of another unless you know the other exists? Many think e-mail from apparent strangers, e-blogs, etc., suggest there is no shortage of possible such solutions. In that context, is the Virtual Observatory in fact the necessary and desirable part of the solution? Specifically, does the VO necessarily play a critical role in delivering end-to-end facility science, from ideas, through proposals, resources/facilities, to distributed, reviewed, knowledge? If not, what else needs to be added?

  14. The first sutureless, laser-welded, end-to-end bowel anastomosis.

    PubMed

    Sauer, J S; Hinshaw, J R; McGuire, K P

    1989-01-01

    The use of laser energy to weld together tissue offers great promise in the expanding field of laser surgery. The published results of laser welding intestinal tissue have, to date, been limited to the successful laser closures of small enterotomies. This is the first report of using laser energy alone to create an end-to-end small bowel anastomosis. A biocompatible, water-soluble, intraluminal stent was employed during the laser welding of this sutureless, stapleless ileal anastomosis in a rabbit model. Excellent recovery and healing were observed. The rapidity, ease, and potential for full precision automation of laser welding mandates further research.

  15. Deriving comprehensive error breakdown for wide field adaptive optics systems using end-to-end simulations

    NASA Astrophysics Data System (ADS)

    Ferreira, F.; Gendron, E.; Rousset, G.; Gratadour, D.

    2016-07-01

    The future European Extremely Large Telescope (E-ELT) adaptive optics (AO) systems will aim at wide field correction and large sky coverage. Their performance will be improved by using post processing techniques, such as point spread function (PSF) deconvolution. The PSF estimation involves characterization of the different error sources in the AO system. Such error contributors are difficult to estimate: simulation tools are a good way to do that. We have developed in COMPASS (COMputing Platform for Adaptive opticS Systems), an end-to-end simulation tool using GPU (Graphics Processing Unit) acceleration, an estimation tool that provides a comprehensive error budget by the outputs of a single simulation run.

  16. Satellite/Terrestrial Networks: End-to-End Communication Interoperability Quality of Service Experiments

    NASA Technical Reports Server (NTRS)

    Ivancic, William D.

    1998-01-01

    Various issues associated with satellite/terrestrial end-to-end communication interoperability are presented in viewgraph form. Specific topics include: 1) Quality of service; 2) ATM performance characteristics; 3) MPEG-2 transport stream mapping to AAL-5; 4) Observation and discussion of compressed video tests over ATM; 5) Digital video over satellites status; 6) Satellite link configurations; 7) MPEG-2 over ATM with binomial errors; 8) MPEG-2 over ATM channel characteristics; 8) MPEG-2 over ATM over emulated satellites; 9) MPEG-2 transport stream with errors; and a 10) Dual decoder test.

  17. End-to-end planning and scheduling systems technology for space operations

    NASA Astrophysics Data System (ADS)

    Moe, Karen L.

    1992-08-01

    Consideration is given to planning and scheduling operations concepts from an end-to-end perspective, through both mission operations and institutional support functions. An operations concept is proposed which is based on a flexible request language used to state resource requirements and mission constraints to a scheduling system. The language has the potential to evolve into an international standard for exchanging service request information on international space networks. The key benefit of the flexible scheduling request concept is the shift of a significant conflict resolution effort from humans to computers, reducing the time for generating a week's worth of schedules to hours instead of days.

  18. LWIR scene simulator developed for end-to-end performance evaluation of focal planes

    NASA Technical Reports Server (NTRS)

    Thompson, Niels A.; Bowser, William M.; Song, Sung H.; Skiff, Laura T.; Powell, William W.; Romero, Charles

    1992-01-01

    The development of a long-wave infrared optical simulator facilitates evaluation of the end-to-end performance of long wavelength infrared (LWIR) focal plane arrays (FPAs) in a system-like environment. This simulator provides selectable structured scene inputs to a focal plane module or array. Background irradiances as low as 10 exp 10 photons/sq cm s are achievable when the simulator is cooled with liquid helium. The optical simulator can generate single or multiple targets of controllable intensities, and uniform or structured background irradiances. The infrared scenes can be viewed in a stationary mode or dynamically scanned across the focal plane.

  19. End-to-End Assessment of a Large Aperture Segmented Ultraviolet Optical Infrared (UVOIR) Telescope Architecture

    NASA Technical Reports Server (NTRS)

    Feinberg, Lee; Bolcar, Matt; Liu, Alice; Guyon, Olivier; Stark,Chris; Arenberg, Jon

    2016-01-01

    Key challenges of a future large aperture, segmented Ultraviolet Optical Infrared (UVOIR) Telescope capable of performing a spectroscopic survey of hundreds of Exoplanets will be sufficient stability to achieve 10-10 contrast measurements and sufficient throughput and sensitivity for high yield Exo-Earth spectroscopic detection. Our team has collectively assessed an optimized end to end architecture including a high throughput coronagraph capable of working with a segmented telescope, a cost-effective and heritage based stable segmented telescope, a control architecture that minimizes the amount of new technologies, and an Exo-Earth yield assessment to evaluate potential performance.

  20. End-to-end planning and scheduling systems technology for space operations

    NASA Technical Reports Server (NTRS)

    Moe, Karen L.

    1992-01-01

    Consideration is given to planning and scheduling operations concepts from an end-to-end perspective, through both mission operations and institutional support functions. An operations concept is proposed which is based on a flexible request language used to state resource requirements and mission constraints to a scheduling system. The language has the potential to evolve into an international standard for exchanging service request information on international space networks. The key benefit of the flexible scheduling request concept is the shift of a significant conflict resolution effort from humans to computers, reducing the time for generating a week's worth of schedules to hours instead of days.

  1. Solving Large Sparse Linear Systems in End-to-end Accelerator Structure Simulations

    SciTech Connect

    Lee, L

    2004-01-23

    This paper presents a case study of solving very large sparse linear systems in end-to-end accelerator structure simulations. Both direct solvers and iterative solvers are investigated. A parallel multilevel preconditioner based on hierarchical finite element basis functions is considered and has been implemented to accelerate the convergence of iterative solvers. A linear system with matrix size 93,147,736 and with 3,964,961,944 non-zeros from 3D electromagnetic finite element discretization has been solved in less than 8 minutes with 1024 CPUs on the NERSC IBM SP. The resource utilization as well as the application performance for these solvers is discussed.

  2. The end-to-end simulator for the E-ELT HIRES high resolution spectrograph

    NASA Astrophysics Data System (ADS)

    Genoni, M.; Landoni, M.; Riva, M.; Pariani, G.; Mason, E.; Di Marcantonio, P.; Disseau, K.; Di Varano, I.; Gonzalez, O.; Huke, P.; Korhonen, H.; Li Causi, Gianluca

    2017-06-01

    We present the design, architecture and results of the End-to-End simulator model of the high resolution spectrograph HIRES for the European Extremely Large Telescope (E-ELT). This system can be used as a tool to characterize the spectrograph both by engineers and scientists. The model allows to simulate the behavior of photons starting from the scientific object (modeled bearing in mind the main science drivers) to the detector, considering also calibration light sources, and allowing to perform evaluation of the different parameters of the spectrograph design. In this paper, we will detail the architecture of the simulator and the computational model which are strongly characterized by modularity and flexibility that will be crucial in the next generation astronomical observation projects like E-ELT due to of the high complexity and long-time design and development. Finally, we present synthetic images obtained with the current version of the End-to-End simulator based on the E-ELT HIRES requirements (especially high radial velocity accuracy). Once ingested in the Data reduction Software (DRS), they will allow to verify that the instrument design can achieve the radial velocity accuracy needed by the HIRES science cases.

  3. An End-To-End Near-Earth Asteroid Resource Exploitation Plan

    NASA Astrophysics Data System (ADS)

    Reed, K. L.

    2000-01-01

    The possible end result of the utilization of raw materials garnered from near-Earth asteroids (NEAs) has been well documented if often a bit fanciful. Very few have put forward an end-to-end plan from prospecting to mine closure for any specific asteroid or for any particular asteroid resource. There are many aspects to planning for the mining of raw materials from asteroids that have never been encountered in terrestrial resource exploitation due to the dispersed nature of the asteroids. As an example from petroleum exploration, if a dry hole is drilled in a large geologic setting indicative of petroleum deposits, one only need pack the drill rig up and move it to a new spot. In asteroid exploitation, the problem of "moving to a new spot" is complicated, as the "new spot" is moving constantly and may be many millions of kilometers distant at great cost in time and rocket fuel. This paper will outline a relatively low-risk, probable high-return, end-to-end plan for the exploitation and utilization of asteroid raw materials. All aspects of exploration and mining will attempt to be addressed, from prospecting, exploration, and evaluation of possible resources to initialization, industrialization, and closure of the mine. It will attempt to plan for the acquisition of not just the needed scientific knowledge, but also to plan for acquisition of the engineering and geotechnical knowledge needed for effective mining of a small planetary object.

  4. An End-To-End Test of A Simulated Nuclear Electric Propulsion System

    NASA Technical Reports Server (NTRS)

    VanDyke, Melissa; Hrbud, Ivana; Goddfellow, Keith; Rodgers, Stephen L. (Technical Monitor)

    2002-01-01

    The Safe Affordable Fission Engine (SAFE) test series addresses Phase I Space Fission Systems issues in it particular non-nuclear testing and system integration issues leading to the testing and non-nuclear demonstration of a 400-kW fully integrated flight unit. The first part of the SAFE 30 test series demonstrated operation of the simulated nuclear core and heat pipe system. Experimental data acquired in a number of different test scenarios will validate existing computational models, demonstrated system flexibility (fast start-ups, multiple start-ups/shut downs), simulate predictable failure modes and operating environments. The objective of the second part is to demonstrate an integrated propulsion system consisting of a core, conversion system and a thruster where the system converts thermal heat into jet power. This end-to-end system demonstration sets a precedent for ground testing of nuclear electric propulsion systems. The paper describes the SAFE 30 end-to-end system demonstration and its subsystems.

  5. End-to-End Rate-Distortion Optimized MD Mode Selection for Multiple Description Video Coding

    NASA Astrophysics Data System (ADS)

    Heng, Brian A.; Apostolopoulos, John G.; Lim, Jae S.

    2006-12-01

    Multiple description (MD) video coding can be used to reduce the detrimental effects caused by transmission over lossy packet networks. A number of approaches have been proposed for MD coding, where each provides a different tradeoff between compression efficiency and error resilience. How effectively each method achieves this tradeoff depends on the network conditions as well as on the characteristics of the video itself. This paper proposes an adaptive MD coding approach which adapts to these conditions through the use of adaptive MD mode selection. The encoder in this system is able to accurately estimate the expected end-to-end distortion, accounting for both compression and packet loss-induced distortions, as well as for the bursty nature of channel losses and the effective use of multiple transmission paths. With this model of the expected end-to-end distortion, the encoder selects between MD coding modes in a rate-distortion (R-D) optimized manner to most effectively tradeoff compression efficiency for error resilience. We show how this approach adapts to both the local characteristics of the video and network conditions and demonstrates the resulting gains in performance using an H.264-based adaptive MD video coder.

  6. Micro-Precision Interferometer Testbed: end-to-end system integration of control structure interaction technologies

    NASA Astrophysics Data System (ADS)

    Neat, Gregory W.; Sword, Lee F.; Hines, Braden E.; Calvet, Robert J.

    1993-09-01

    This paper describes the overall design and planned phased delivery of the ground-based Micro-Precision Interferometer (MPI) Testbed. The testbed is a half scale replica of a future space-based interferometer containing all the spacecraft subsystems necessary to perform an astrometric measurement. Appropriate sized reaction wheels will regulate the testbed attitude as well as provide a flight-like disturbance source. The optical system will consist of two complete Michelson interferometers. Successful interferometric measurements require controlling the positional stabilities of these optical elements to the nanometer level. The primary objective of the testbed is to perform a system integration of Control Structure Interaction (CSI) technologies necessary to demonstrate the end-to-end operation of a space- based interferometer, ultimately proving to flight mission planners that the necessary control technology exists to meet the challenging requirements of future space-based interferometry missions. These technologies form a multi-layered vibration attenuation architecture to achieve the necessary quiet environment. This three layered methodology blends disturbance isolation, structural quieting and active optical control techniques. The paper describes all the testbed subsystems in this end-to-end ground-based system as well as the present capabilities of the evolving testbed.

  7. A real-time 3D end-to-end augmented reality system (and its representation transformations)

    NASA Astrophysics Data System (ADS)

    Tytgat, Donny; Aerts, Maarten; De Busser, Jeroen; Lievens, Sammy; Rondao Alface, Patrice; Macq, Jean-Francois

    2016-09-01

    The new generation of HMDs coming to the market is expected to enable many new applications that allow free viewpoint experiences with captured video objects. Current applications usually rely on 3D content that is manually created or captured in an offline manner. In contrast, this paper focuses on augmented reality applications that use live captured 3D objects while maintaining free viewpoint interaction. We present a system that allows live dynamic 3D objects (e.g. a person who is talking) to be captured in real-time. Real-time performance is achieved by traversing a number of representation formats and exploiting their specific benefits. For instance, depth images are maintained for fast neighborhood retrieval and occlusion determination, while implicit surfaces are used to facilitate multi-source aggregation for both geometry and texture. The result is a 3D reconstruction system that outputs multi-textured triangle meshes at real-time rates. An end-to-end system is presented that captures and reconstructs live 3D data and allows for this data to be used on a networked (AR) device. For allocating the different functional blocks onto the available physical devices, a number of alternatives are proposed considering the available computational power and bandwidth for each of the components. As we will show, the representation format can play an important role in this functional allocation and allows for a flexible system that can support a highly heterogeneous infrastructure.

  8. Cyberinfrastructure to support Real-time, End-to-End, High Resolution, Localized Forecasting

    NASA Astrophysics Data System (ADS)

    Ramamurthy, M. K.; Lindholm, D.; Baltzer, T.; Domenico, B.

    2004-12-01

    From natural disasters such as flooding and forest fires to man-made disasters such as toxic gas releases, the impact of weather-influenced severe events on society can be profound. Understanding, predicting, and mitigating such local, mesoscale events calls for a cyberinfrastructure to integrate multidisciplinary data, tools, and services as well as the capability to generate and use high resolution data (such as wind and precipitation) from localized models. The need for such end to end systems -- including data collection, distribution, integration, assimilation, regionalized mesoscale modeling, analysis, and visualization -- has been realized to some extent in many academic and quasi-operational environments, especially for atmospheric sciences data. However, many challenges still remain in the integration and synthesis of data from multiple sources and the development of interoperable data systems and services across those disciplines. Over the years, the Unidata Program Center has developed several tools that have either directly or indirectly facilitated these local modeling activities. For example, the community is using Unidata technologies such as the Internet Data Distribution (IDD) system, Local Data Manger (LDM), decoders, netCDF libraries, Thematic Realtime Environmental Distributed Data Services (THREDDS), and the Integrated Data Viewer (IDV) in their real-time prediction efforts. In essence, these technologies for data reception and processing, local and remote access, cataloging, and analysis and visualization coupled with technologies from others in the community are becoming the foundation of a cyberinfrastructure to support an end-to-end regional forecasting system. To build on these capabilities, the Unidata Program Center is pleased to be a significant contributor to the Linked Environments for Atmospheric Discovery (LEAD) project, a NSF-funded multi-institutional large Information Technology Research effort. The goal of LEAD is to create an

  9. End-to-end performance analysis using engineering confidence models and a ground processor prototype

    NASA Astrophysics Data System (ADS)

    Kruse, Klaus-Werner; Sauer, Maximilian; Jäger, Thomas; Herzog, Alexandra; Schmitt, Michael; Huchler, Markus; Wallace, Kotska; Eisinger, Michael; Heliere, Arnaud; Lefebvre, Alain; Maher, Mat; Chang, Mark; Phillips, Tracy; Knight, Steve; de Goeij, Bryan T. G.; van der Knaap, Frits; Van't Hof, Adriaan

    2015-10-01

    The European Space Agency (ESA) and the Japan Aerospace Exploration Agency (JAXA) are co-operating to develop the EarthCARE satellite mission with the fundamental objective of improving the understanding of the processes involving clouds, aerosols and radiation in the Earth's atmosphere. The EarthCARE Multispectral Imager (MSI) is relatively compact for a space borne imager. As a consequence, the immediate point-spread function (PSF) of the instrument will be mainly determined by the diffraction caused by the relatively small optical aperture. In order to still achieve a high contrast image, de-convolution processing is applied to remove the impact of diffraction on the PSF. A Lucy-Richardson algorithm has been chosen for this purpose. This paper will describe the system setup and the necessary data pre-processing and post-processing steps applied in order to compare the end-to-end image quality with the L1b performance required by the science community.

  10. End-to-End QoS for Differentiated Services and ATM Internetworking

    NASA Technical Reports Server (NTRS)

    Su, Hongjun; Atiquzzaman, Mohammed

    2001-01-01

    The Internet was initially design for non real-time data communications and hence does not provide any Quality of Service (QoS). The next generation Internet will be characterized by high speed and QoS guarantee. The aim of this paper is to develop a prioritized early packet discard (PEPD) scheme for ATM switches to provide service differentiation and QoS guarantee to end applications running over next generation Internet. The proposed PEPD scheme differs from previous schemes by taking into account the priority of packets generated from different application. We develop a Markov chain model for the proposed scheme and verify the model with simulation. Numerical results show that the results from the model and computer simulation are in close agreement. Our PEPD scheme provides service differentiation to the end-to-end applications.

  11. End-to-end simulations of the E-ELT/METIS coronagraphs

    NASA Astrophysics Data System (ADS)

    Carlomagno, Brunella; Absil, Olivier; Kenworthy, Matthew; Ruane, Garreth; Keller, Christoph U.; Otten, Gilles; Feldt, Markus; Hippler, Stefan; Huby, Elsa; Mawet, Dimitri; Delacroix, Christian; Surdej, Jean; Habraken, Serge; Forsberg, Pontus; Karlsson, Mikael; Vargas Catalan, Ernesto; Brandl, Bernhard R.

    2016-07-01

    The direct detection of low-mass planets in the habitable zone of nearby stars is an important science case for future E-ELT instruments such as the mid-infrared imager and spectrograph METIS, which features vortex phase masks and apodizing phase plates (APP) in its baseline design. In this work, we present end-to-end performance simulations, using Fourier propagation, of several METIS coronagraphic modes, including focal-plane vortex phase masks and pupil-plane apodizing phase plates, for the centrally obscured, segmented E-ELT pupil. The atmosphere and the AO contributions are taken into account. Hybrid coronagraphs combining the advantages of vortex phase masks and APPs are considered to improve the METIS coronagraphic performance.

  12. The Kepler End-to-End Data Pipeline: From Photons to Far Away Worlds

    NASA Technical Reports Server (NTRS)

    Cooke, Brian; Thompson, Richard; Standley, Shaun

    2012-01-01

    Launched by NASA on 6 March 2009, the Kepler Mission has been observing more than 100,000 targets in a single patch of sky between the constellations Cygnus and Lyra almost continuously for the last two years looking for planetary systems using the transit method. As of October 2011, the Kepler spacecraft has collected and returned to Earth just over 290 GB of data, identifying 1235 planet candidates with 25 of these candidates confirmed as planets via ground observation. Extracting the telltale signature of a planetary system from stellar photometry where valid signal transients can be small as a 40 ppm is a difficult and exacting task. The end-to end processing of determining planetary candidates from noisy, raw photometric measurements is discussed.

  13. End-to-end automated microfluidic platform for synthetic biology: from design to functional analysis

    DOE PAGES

    Linshiz, Gregory; Jensen, Erik; Stawski, Nina; ...

    2016-02-02

    Synthetic biology aims to engineer biological systems for desired behaviors. The construction of these systems can be complex, often requiring genetic reprogramming, extensive de novo DNA synthesis, and functional screening. Here, we present a programmable, multipurpose microfluidic platform and associated software and apply the platform to major steps of the synthetic biology research cycle: design, construction, testing, and analysis. We show the platform’s capabilities for multiple automated DNA assembly methods, including a new method for Isothermal Hierarchical DNA Construction, and for Escherichia coli and Saccharomyces cerevisiae transformation. The platform enables the automated control of cellular growth, gene expression induction, andmore » proteogenic and metabolic output analysis. Finally, taken together, we demonstrate the microfluidic platform’s potential to provide end-to-end solutions for synthetic biology research, from design to functional analysis.« less

  14. End-to-End Assessment of a Large Aperture Segmented Ultraviolet Optical Infrared (UVOIR) Telescope Architecture

    NASA Technical Reports Server (NTRS)

    Feinberg, Lee; Rioux, Norman; Bolcar, Matthew; Liu, Alice; Guyon, Oliver; Stark, Chris; Arenberg, Jon

    2016-01-01

    Key challenges of a future large aperture, segmented Ultraviolet Optical Infrared (UVOIR) Telescope capable of performing a spectroscopic survey of hundreds of Exoplanets will be sufficient stability to achieve 10^-10 contrast measurements and sufficient throughput and sensitivity for high yield Exo-Earth spectroscopic detection. Our team has collectively assessed an optimized end to end architecture including a high throughput coronagraph capable of working with a segmented telescope, a cost-effective and heritage based stable segmented telescope, a control architecture that minimizes the amount of new technologies, and an Exo-Earth yield assessment to evaluate potential performance. These efforts are combined through integrated modeling, coronagraph evaluations, and Exo-Earth yield calculations to assess the potential performance of the selected architecture. In addition, we discusses the scalability of this architecture to larger apertures and the technological tall poles to enabling it.

  15. Orion MPCV GN and C End-to-End Phasing Tests

    NASA Technical Reports Server (NTRS)

    Neumann, Brian C.

    2013-01-01

    End-to-end integration tests are critical risk reduction efforts for any complex vehicle. Phasing tests are an end-to-end integrated test that validates system directional phasing (polarity) from sensor measurement through software algorithms to end effector response. Phasing tests are typically performed on a fully integrated and assembled flight vehicle where sensors are stimulated by moving the vehicle and the effectors are observed for proper polarity. Orion Multi-Purpose Crew Vehicle (MPCV) Pad Abort 1 (PA-1) Phasing Test was conducted from inertial measurement to Launch Abort System (LAS). Orion Exploration Flight Test 1 (EFT-1) has two end-to-end phasing tests planned. The first test from inertial measurement to Crew Module (CM) reaction control system thrusters uses navigation and flight control system software algorithms to process commands. The second test from inertial measurement to CM S-Band Phased Array Antenna (PAA) uses navigation and communication system software algorithms to process commands. Future Orion flights include Ascent Abort Flight Test 2 (AA-2) and Exploration Mission 1 (EM-1). These flights will include additional or updated sensors, software algorithms and effectors. This paper will explore the implementation of end-to-end phasing tests on a flight vehicle which has many constraints, trade-offs and compromises. Orion PA-1 Phasing Test was conducted at White Sands Missile Range (WSMR) from March 4-6, 2010. This test decreased the risk of mission failure by demonstrating proper flight control system polarity. Demonstration was achieved by stimulating the primary navigation sensor, processing sensor data to commands and viewing propulsion response. PA-1 primary navigation sensor was a Space Integrated Inertial Navigation System (INS) and Global Positioning System (GPS) (SIGI) which has onboard processing, INS (3 accelerometers and 3 rate gyros) and no GPS receiver. SIGI data was processed by GN&C software into thrust magnitude and

  16. End-to-end interoperability and workflows from building architecture design to one or more simulations

    DOEpatents

    Chao, Tian-Jy; Kim, Younghun

    2015-02-10

    An end-to-end interoperability and workflows from building architecture design to one or more simulations, in one aspect, may comprise establishing a BIM enablement platform architecture. A data model defines data entities and entity relationships for enabling the interoperability and workflows. A data definition language may be implemented that defines and creates a table schema of a database associated with the data model. Data management services and/or application programming interfaces may be implemented for interacting with the data model. Web services may also be provided for interacting with the data model via the Web. A user interface may be implemented that communicates with users and uses the BIM enablement platform architecture, the data model, the data definition language, data management services and application programming interfaces to provide functions to the users to perform work related to building information management.

  17. An end-to-end secure patient information access card system.

    PubMed

    Alkhateeb, A; Singer, H; Yakami, M; Takahashi, T

    2000-03-01

    The rapid development of the Internet and the increasing interest in Internet-based solutions has promoted the idea of creating Internet-based health information applications. This will force a change in the role of IC cards in healthcare card systems from a data carrier to an access key medium. At the Medical Informatics Department of Kyoto University Hospital we are developing a smart card patient information project where patient databases are accessed via the Internet. Strong end-to-end data encryption is performed via Secure Socket Layers, transparent to transmit patient information. The smart card is playing the crucial role of access key to the database: user authentication is performed internally without ever revealing the actual key. For easy acceptance by healthcare professionals, the user interface is integrated as a plug-in for two familiar Web browsers, Netscape Navigator and MS Internet Explorer.

  18. Enhancing End-to-End Performance of Information Services Over Ka-Band Global Satellite Networks

    NASA Technical Reports Server (NTRS)

    Bhasin, Kul B.; Glover, Daniel R.; Ivancic, William D.; vonDeak, Thomas C.

    1997-01-01

    The Internet has been growing at a rapid rate as the key medium to provide information services such as e-mail, WWW and multimedia etc., however its global reach is limited. Ka-band communication satellite networks are being developed to increase the accessibility of information services via the Internet at global scale. There is need to assess satellite networks in their ability to provide these services and interconnect seamlessly with existing and proposed terrestrial telecommunication networks. In this paper the significant issues and requirements in providing end-to-end high performance for the delivery of information services over satellite networks based on various layers in the OSI reference model are identified. Key experiments have been performed to evaluate the performance of digital video and Internet over satellite-like testbeds. The results of the early developments in ATM and TCP protocols over satellite networks are summarized.

  19. End-to-end test of the electron-proton spectrometer

    NASA Technical Reports Server (NTRS)

    Cash, B. L.

    1972-01-01

    A series of end-to-end tests were performed to demonstrate the proper functioning of the complete Electron-Proton Spectrometer (EPS). The purpose of the tests was to provide experimental verification of the design and to provide a complete functional performance check of the instrument from the excitation of the sensors to and including the data processor and equipment test set. Each of the channels of the EPS was exposed to a calibrated beam of energetic particles, and counts were accumulated for a predetermined period of time for each of several energies. The counts were related to the known flux of particles to give a monodirectional response function for each channel. The measured response function of the test unit was compared to the response function determined for the calibration sensors from the data taken from the calibration program.

  20. End-to-End Network Simulation Using a Site-Specific Radio Wave Propagation Model

    SciTech Connect

    Djouadi, Seddik M; Kuruganti, Phani Teja; Nutaro, James J

    2013-01-01

    The performance of systems that rely on a wireless network depends on the propagation environment in which that network operates. To predict how these systems and their supporting networks will perform, simulations must take into consideration the propagation environment and how this effects the performance of the wireless network. Network simulators typically use empirical models of the propagation environment. However, these models are not intended for, and cannot be used, to predict a wireless system will perform in a specific location, e.g., in the center of a particular city or the interior of a specific manufacturing facility. In this paper, we demonstrate how a site-specific propagation model and the NS3 simulator can be used to predict the end-to-end performance of a wireless network.

  1. End-to-end performance measurement of Internet based medical applications.

    PubMed Central

    Dev, P.; Harris, D.; Gutierrez, D.; Shah, A.; Senger, S.

    2002-01-01

    We present a method to obtain an end-to-end characterization of the performance of an application over a network. This method is not dependent on any specific application or type of network. The method requires characterization of network parameters, such as latency and packet loss, between the expected server or client endpoints, as well as characterization of the application's constraints on these parameters. A subjective metric is presented that integrates these characterizations and that operates over a wide range of applications and networks. We believe that this method may be of wide applicability as research and educational applications increasingly make use of computation and data servers that are distributed over the Internet. PMID:12463816

  2. Sieving of H2 and D2 Through End-to-End Nanotubes

    NASA Astrophysics Data System (ADS)

    Devagnik, Dasgupta; Debra, J. Searles; Lamberto, Rondoni; Stefano, Bernardi

    2014-10-01

    We study the quantum molecular sieving of H2 and D2 through two nanotubes placed end-to-end. An analytic treatment, assuming that the particles have classical motion along the axis of the nanotube and are confined in a potential well in the radial direction, is considered. Using this idealistic model, and under certain conditions, it is found that this device can act as a complete sieve, allowing chemically pure deuterium to be isolated from an isotope mixture. We also consider a more realistic model of two carbon nanotubes and carry out molecular dynamics simulations using a Feynman—Hibbs potential to model the quantum effects on the dynamics of H2 and D2. Sieving is also observed in this case, but is caused by a different process.

  3. End-to-end commissioning demonstration of the James Webb Space Telescope

    NASA Astrophysics Data System (ADS)

    Acton, D. Scott; Towell, Timothy; Schwenker, John; Shields, Duncan; Sabatke, Erin; Contos, Adam R.; Hansen, Karl; Shi, Fang; Dean, Bruce; Smith, Scott

    2007-09-01

    The one-meter Testbed Telescope (TBT) has been developed at Ball Aerospace to facilitate the design and implementation of the wavefront sensing and control (WFSC) capabilities of the James Webb Space Telescope (JWST). We have recently conducted an "end-to-end" demonstration of the flight commissioning process on the TBT. This demonstration started with the Primary Mirror (PM) segments and the Secondary Mirror (SM) in random positions, traceable to the worst-case flight deployment conditions. The commissioning process detected and corrected the deployment errors, resulting in diffraction-limited performance across the entire science FOV. This paper will describe the commissioning demonstration and the WFSC algorithms used at each step in the process.

  4. End-to-end automated microfluidic platform for synthetic biology: from design to functional analysis

    SciTech Connect

    Linshiz, Gregory; Jensen, Erik; Stawski, Nina; Bi, Changhao; Elsbree, Nick; Jiao, Hong; Kim, Jungkyu; Mathies, Richard; Keasling, Jay D.; Hillson, Nathan J.

    2016-02-02

    Synthetic biology aims to engineer biological systems for desired behaviors. The construction of these systems can be complex, often requiring genetic reprogramming, extensive de novo DNA synthesis, and functional screening. Here, we present a programmable, multipurpose microfluidic platform and associated software and apply the platform to major steps of the synthetic biology research cycle: design, construction, testing, and analysis. We show the platform’s capabilities for multiple automated DNA assembly methods, including a new method for Isothermal Hierarchical DNA Construction, and for Escherichia coli and Saccharomyces cerevisiae transformation. The platform enables the automated control of cellular growth, gene expression induction, and proteogenic and metabolic output analysis. Finally, taken together, we demonstrate the microfluidic platform’s potential to provide end-to-end solutions for synthetic biology research, from design to functional analysis.

  5. The Consolidation of the End-to-End Avionics Systems Testbench

    NASA Astrophysics Data System (ADS)

    Wijnands, Quirien; Torelli, Felice; Blommestijn, Robert; Kranz, Stephan; Koster, Jean-Paul

    2014-08-01

    Over the past years, the Avionics System Test Bench (ATB) has been used to support the demonstration and validation of upcoming space avionics related standards and technologies in a representative environment. Next to this another main use-case of the facility has been to support projects in their needs of assessing particular technology related issues. In doing so, it was necessary to add activity- and project specifics to different configurations of the ATB, leading to a proliferation of facilities and technologies. In some cases however the results and lessons-learned from these efforts and activities were considered valuable to the ATB-concept in general and therefore needed preservation in the ATB mainstream for future reuse. Currently activities are ongoing to consolidate the End-To-End Avionics Systems TestBench (E2E-ATB). In this paper the resulting details of these activities are described as enhancements and improvements per ATB configuration.

  6. End-to-End Beam Simulations for the New Muon G-2 Experiment at Fermilab

    SciTech Connect

    Korostelev, Maxim; Bailey, Ian; Herrod, Alexander; Morgan, James; Morse, William; Stratakis, Diktys; Tishchenko, Vladimir; Wolski, Andrzej

    2016-06-01

    The aim of the new muon g-2 experiment at Fermilab is to measure the anomalous magnetic moment of the muon with an unprecedented uncertainty of 140 ppb. A beam of positive muons required for the experiment is created by pion decay. Detailed studies of the beam dynamics and spin polarization of the muons are important to predict systematic uncertainties in the experiment. In this paper, we present the results of beam simulations and spin tracking from the pion production target to the muon storage ring. The end-to-end beam simulations are developed in Bmad and include the processes of particle decay, collimation (with accurate representation of all apertures) and spin tracking.

  7. Swift XRT effective area measured at the Panter end-to-end tests

    NASA Astrophysics Data System (ADS)

    Tagliaferri, Gianpiero; Moretti, Alberto; Campana, Sergio; Abbey, Anthony F.; Ambrosi, Richard M.; Angelini, Lorella; Beardmore, Andrew P.; Bräuninger, Heinrich W.; Burkert, Wolfgang; Burrows, David N.; Capalbi, Milvia; Chincarini, Guido; Citterio, Oberto; Cusumano, Giancarlo; Freyberg, Michael J.; Giommi, Paolo; Hartner, Gisela D.; Hill, Joanne E.; Mori, Koji; Morris, Dave C.; Mukerjee, Kallol; Nousek, John A.; Osborne, Julian P.; Short, Alexander D. T.; Tamburelli, F.; Watson, D. J.; Wells, Alan A.

    2004-02-01

    The Swift X-ray Telescope (XRT) is designed to make astrometric, spectroscopic and photometric observations of the X-ray emission from Gamma-ray bursts and their afterglows, in the energy band 0.2 - 10 keV. Here we report first results of the analysis of Swift XRT effective area at five different energies as measured during the end-to-end calibration campaign at the Panter X-ray beam line facility. The analysis comprises the study of the effective area both on-axis and off-axis for different event grade selection. We compare the laboratory results with the expectations and show that the measured effective area meets the mission scientific requirements.

  8. End-to-end automated microfluidic platform for synthetic biology: from design to functional analysis

    DOE PAGES

    Linshiz, Gregory; Jensen, Erik; Stawski, Nina; ...

    2016-02-02

    Synthetic biology aims to engineer biological systems for desired behaviors. The construction of these systems can be complex, often requiring genetic reprogramming, extensive de novo DNA synthesis, and functional screening. Here, we present a programmable, multipurpose microfluidic platform and associated software and apply the platform to major steps of the synthetic biology research cycle: design, construction, testing, and analysis. We show the platform’s capabilities for multiple automated DNA assembly methods, including a new method for Isothermal Hierarchical DNA Construction, and for Escherichia coli and Saccharomyces cerevisiae transformation. The platform enables the automated control of cellular growth, gene expression induction, andmore » proteogenic and metabolic output analysis. Finally, taken together, we demonstrate the microfluidic platform’s potential to provide end-to-end solutions for synthetic biology research, from design to functional analysis.« less

  9. End-to-end system test for solid-state microdosemeters.

    PubMed

    Pisacane, V L; Dolecek, Q E; Malak, H; Dicello, J F

    2010-08-01

    The gold standard in microdosemeters has been the tissue equivalent proportional counter (TEPC) that utilises a gas cavity. An alternative is the solid-state microdosemeter that replaces the gas with a condensed phase (silicon) detector with microscopic sensitive volumes. Calibrations of gas and solid-state microdosemeters are generally carried out using radiation sources built into the detector that impose restrictions on their handling, transportation and licensing in accordance with the regulations from international, national and local nuclear regulatory bodies. Here a novel method is presented for carrying out a calibration and end-to-end system test of a microdosemeter using low-energy photons as the initiating energy source, thus obviating the need for a regulated ionising radiation source. This technique may be utilised to calibrate both a solid-state microdosemeter and, with modification, a TEPC with the higher average ionisation energy of a gas.

  10. End-to-end assessment of a large aperture segmented ultraviolet optical infrared (UVOIR) telescope architecture

    NASA Astrophysics Data System (ADS)

    Feinberg, Lee; Rioux, Norman; Bolcar, Matthew; Liu, Alice; Guyon, Olivier; Stark, Chris; Arenberg, Jon

    2016-07-01

    Key challenges of a future large aperture, segmented Ultraviolet Optical Infrared (UVOIR) Telescope capable of performing a spectroscopic survey of hundreds of Exoplanets will be sufficient stability to achieve 10^-10 contrast measurements and sufficient throughput and sensitivity for high yield exo-earth spectroscopic detection. Our team has collectively assessed an optimized end to end architecture including a high throughput coronagraph capable of working with a segmented telescope, a cost-effective and heritage based stable segmented telescope, a control architecture that minimizes the amount of new technologies, and an exo-earth yield assessment to evaluate potential performance. These efforts are combined through integrated modeling, coronagraph evaluations, and exo-earth yield calculations to assess the potential performance of the selected architecture. In addition, we discusses the scalability of this architecture to larger apertures and the technological tall poles to enabling these missions.

  11. The Kepler End-to-End Data Pipeline: From Photons to Far Away Worlds

    NASA Technical Reports Server (NTRS)

    Cooke, Brian; Thompson, Richard; Standley, Shaun

    2012-01-01

    Launched by NASA on 6 March 2009, the Kepler Mission has been observing more than 100,000 targets in a single patch of sky between the constellations Cygnus and Lyra almost continuously for the last two years looking for planetary systems using the transit method. As of October 2011, the Kepler spacecraft has collected and returned to Earth just over 290 GB of data, identifying 1235 planet candidates with 25 of these candidates confirmed as planets via ground observation. Extracting the telltale signature of a planetary system from stellar photometry where valid signal transients can be small as a 40 ppm is a difficult and exacting task. The end-to end processing of determining planetary candidates from noisy, raw photometric measurements is discussed.

  12. End-to-end automated microfluidic platform for synthetic biology: from design to functional analysis

    SciTech Connect

    Linshiz, Gregory; Jensen, Erik; Stawski, Nina; Bi, Changhao; Elsbree, Nick; Jiao, Hong; Kim, Jungkyu; Mathies, Richard; Keasling, Jay D.; Hillson, Nathan J.

    2016-02-02

    Synthetic biology aims to engineer biological systems for desired behaviors. The construction of these systems can be complex, often requiring genetic reprogramming, extensive de novo DNA synthesis, and functional screening. Here, we present a programmable, multipurpose microfluidic platform and associated software and apply the platform to major steps of the synthetic biology research cycle: design, construction, testing, and analysis. We show the platform’s capabilities for multiple automated DNA assembly methods, including a new method for Isothermal Hierarchical DNA Construction, and for Escherichia coli and Saccharomyces cerevisiae transformation. The platform enables the automated control of cellular growth, gene expression induction, and proteogenic and metabolic output analysis. Finally, taken together, we demonstrate the microfluidic platform’s potential to provide end-to-end solutions for synthetic biology research, from design to functional analysis.

  13. End-to-end communication test on variable length packet structures utilizing AOS testbed

    NASA Technical Reports Server (NTRS)

    Miller, Warner H.; Sank, V.; Fong, Wai; Miko, J.; Powers, M.; Folk, John; Conaway, B.; Michael, K.; Yeh, Pen-Shu

    1994-01-01

    This paper describes a communication test, which successfully demonstrated the transfer of losslessly compressed images in an end-to-end system. These compressed images were first formatted into variable length Consultative Committee for Space Data Systems (CCSDS) packets in the Advanced Orbiting System Testbed (AOST). The CCSDS data Structures were transferred from the AOST to the Radio Frequency Simulations Operations Center (RFSOC), via a fiber optic link, where data was then transmitted through the Tracking and Data Relay Satellite System (TDRSS). The received data acquired at the White Sands Complex (WSC) was transferred back to the AOST where the data was captured and decompressed back to the original images. This paper describes the compression algorithm, the AOST configuration, key flight components, data formats, and the communication link characteristics and test results.

  14. Advances in POST2 End-to-End Descent and Landing Simulation for the ALHAT Project

    NASA Technical Reports Server (NTRS)

    Davis, Jody L.; Striepe, Scott A.; Maddock, Robert W.; Hines, Glenn D.; Paschall, Stephen, II; Cohanim, Babak E.; Fill, Thomas; Johnson, Michael C.; Bishop, Robert H.; DeMars, Kyle J.; hide

    2008-01-01

    Program to Optimize Simulated Trajectories II (POST2) is used as a basis for an end-to-end descent and landing trajectory simulation that is essential in determining design and integration capability and system performance of the lunar descent and landing system and environment models for the Autonomous Landing and Hazard Avoidance Technology (ALHAT) project. The POST2 simulation provides a six degree-of-freedom capability necessary to test, design and operate a descent and landing system for successful lunar landing. This paper presents advances in the development and model-implementation of the POST2 simulation, as well as preliminary system performance analysis, used for the testing and evaluation of ALHAT project system models.

  15. Development of a Dynamic, End-to-End Free Piston Stirling Convertor Model

    NASA Technical Reports Server (NTRS)

    Regan, Timothy F.; Gerber, Scott S.; Roth, Mary Ellen

    2004-01-01

    A dynamic model for a free-piston Stirling convertor is being developed at the NASA Glenn Research Center. The model is an end-to-end system model that includes the cycle thermodynamics, the dynamics, and electrical aspects of the system. The subsystems of interest are the heat source, the springs, the moving masses, the linear alternator, the controller, and the end-user load. The envisioned use of the model will be in evaluating how changes in a subsystem could affect the operation of the convertor. The model under development will speed the evaluation of improvements to a subsystem and aid in determining areas in which most significant improvements may be found. One of the first uses of the end-toend model will be in the development of controller architectures. Another related area is in evaluating changes to details in the linear alternator.

  16. Evaluation of NASA's end-to-end data systems using DSDS+

    NASA Technical Reports Server (NTRS)

    Rouff, Christopher; Davenport, William; Message, Philip

    1994-01-01

    The Data Systems Dynamic Simulator (DSDS+) is a software tool being developed by the authors to evaluate candidate architectures for NASA's end-to-end data systems. Via modeling and simulation, we are able to quickly predict the performance characteristics of each architecture, to evaluate 'what-if' scenarios, and to perform sensitivity analyses. As such, we are using modeling and simulation to help NASA select the optimal system configuration, and to quantify the performance characteristics of this system prior to its delivery. This paper is divided into the following six sections: (1) The role of modeling and simulation in the systems engineering process. In this section, we briefly describe the different types of results obtained by modeling each phase of the systems engineering life cycle, from concept definition through operations and maintenance; (2) Recent applications of DSDS+. In this section, we describe ongoing applications of DSDS+ in support of the Earth Observing System (EOS), and we present some of the simulation results generated of candidate system designs. So far, we have modeled individual EOS subsystems (e.g. the Solid State Recorders used onboard the spacecraft), and we have also developed an integrated model of the EOS end-to-end data processing and data communications systems (from the payloads onboard to the principle investigator facilities on the ground); (3) Overview of DSDS+. In this section we define what a discrete-event model is, and how it works. The discussion is presented relative to the DSDS+ simulation tool that we have developed, including it's run-time optimization algorithms that enables DSDS+ to execute substantially faster than comparable discrete-event simulation tools; (4) Summary. In this section, we summarize our findings and 'lessons learned' during the development and application of DSDS+ to model NASA's data systems; (5) Further Information; and (6) Acknowledgements.

  17. Somatic cells efficiently join unrelated DNA segments end-to-end.

    PubMed Central

    Wilson, J H; Berget, P B; Pipas, J M

    1982-01-01

    Molecular substrates for probing nonhomologous recombination in somatic cells were constructed by inserting pBR322 sequences at selected sites on the simian virus 40 (SV40) genome. The chimeric products are too large to be packaged into an SV40 capsid. Therefore, production of viable progeny requires that most of the pBR322 sequences be deleted without altering any SV40 sequences that are essential for lytic infection. As judged by plaque assay, these recombination events occur at readily detectable frequencies after transfection into CV1 monkey kidney cells. Depending on the site of pBR322 insertion, the infectivities of the full-length circular or linear chimeras ranged from 0.02 to 2% of the infectivity of linear wild-type SV40 DNA. Nucleotide sequence analysis of several recombinant progeny revealed three distinct classes of recombination junction and indicated that the causative recombination events were minimally dependent on sequence homology. Potential mechanisms involving recombination at internal sites or at ends were distinguished by measuring the infectivity of chimeric molecules from which various lengths of pBR322 had been removed. These data support end-to-end joining as the primary mechanism by which DNA segments recombine nonhomologously in somatic cells. This end joining appears to be very efficient, since SV40 genomes with complementary single-stranded tails or with short non-complementary pBR322 tails were comparably infectious. Overall, this study indicates that mammalian somatic cells are quite efficient at the willy-nilly end-to-end joining of unrelated DNA segments. Images PMID:6294502

  18. The end-to-end testbed of the optical metrology system on-board LISA Pathfinder

    NASA Astrophysics Data System (ADS)

    Steier, F.; Guzmán Cervantes, F.; García Marín, A. F.; Gerardi, D.; Heinzel, G.; Danzmann, K.

    2009-05-01

    LISA Pathfinder is a technology demonstration mission for the Laser Interferometer Space Antenna (LISA). The main experiment on-board LISA Pathfinder is the so-called LISA Technology Package (LTP) which has the aim to measure the differential acceleration between two free-falling test masses with an accuracy of 3 × 10-14 ms-2 Hz-1/2 between 1 mHz and 30 mHz. This measurement is performed interferometrically by the optical metrology system (OMS) on-board LISA Pathfinder. In this paper, we present the development of an experimental end-to-end testbed of the entire OMS. It includes the interferometer and its sub-units, the interferometer backend which is a phasemeter and the processing of the phasemeter output data. Furthermore, three-axes piezo-actuated mirrors are used instead of the free-falling test masses for the characterization of the dynamic behaviour of the system and some parts of the drag-free and attitude control system (DFACS) which controls the test masses and the satellite. The end-to-end testbed includes all parts of the LTP that can reasonably be tested on earth without free-falling test masses. At its present status it consists mainly of breadboard components. Some of those have already been replaced by engineering models of the LTP experiment. In the next steps, further engineering and flight models will also be inserted in this testbed and tested against well-characterized breadboard components. The presented testbed is an important reference for the unit tests and can also be used for validation of the on-board experiment during the mission.

  19. Flexible end-to-end system design for synthetic aperture radar applications

    NASA Astrophysics Data System (ADS)

    Zaugg, Evan C.; Edwards, Matthew C.; Bradley, Joshua P.

    2012-06-01

    This paper presents ARTEMIS, Inc.'s approach to development of end-to-end synthetic aperture radar systems for multiple applications and platforms. The flexible design of the radar and the image processing tools facilitates their inclusion in a variety of application-specific end-to-end systems. Any given application comes with certain requirements that must be met in order to achieve success. A concept of operation is defined which states how the technology is used to meet the requirements of the application. This drives the design decisions. Key to adapting our system to multiple applications is the flexible SlimSAR radar system, which is programmable on-the-fly to meet the imaging requirements of a wide range of altitudes, swath-widths, and platform velocities. The processing software can be used for real-time imagery production or post-flight processing. The ground station is adaptable, and the radar controls can be run by an operator on the ground, on-board the aircraft, or even automated as part of the aircraft autopilot controls. System integration takes the whole operation into account, seeking to flawlessly work with data links and on-board data storage, aircraft and payload control systems, mission planning, and image processing and exploitation. Examples of applications are presented including using a small unmanned aircraft at low altitude with a line of sight data link, a long-endurance UAV maritime surveillance mission with on-board processing, and a manned ground moving target indicator application with the radar using multiple receive channels.

  20. Laparoscopic Resection and End-to-End Ureteroureterostomy for Midureteral Obstruction in Children.

    PubMed

    Lu, Liangsheng; Bi, Yunli; Wang, Xiang; Ruan, Shuangsui

    2017-02-01

    Midureteral obstruction is an extremely rare condition. This retrospective study assessed the outcomes of laparoscopic ureteroureterostomy (UU) in 13 children with midureteral obstructions. Records of patients with midureteral obstruction who underwent laparoscopic end-to-end UU between July 2011 and August 2015 were reviewed. The medical records comprised patient demographic data, intraoperative details, postoperative outcomes, and related complications. Renal ultrasound, magnetic resonance urography, and radioisotope renography were used for pre- and postoperative assessment. Success was defined as removal of symptomatic obstruction or improvement of hydronephrosis. Thirteen patients from 3.0 months to 12 years old were identified: 6 patients presented with asymptomatic hydronephrosis (according to the renal ultrasonography), 3 with intermittent abdominal pain, and 2 with gross hematuria. The remaining 2 patients presented with urinary extravasation after inguinal hernia repair and the Soave procedure, respectively. All patients underwent laparoscopic end-to-end UU. Procedures were performed using either the laparoscopic transperitoneal approach or laparoscopic retroperitoneal approach. All surgeries were performed successfully except for one case that required open surgery because of difficult anastomosis. There were no intraoperative or immediate postoperative complications. The etiology of the midureteral obstruction included congenital midureteral stricture, ureteral polyp, retrocaval ureter, and iatrogenic injury. The mean surgical time was 148.4 min, and postoperative hospital stay was 4.0-9.0 d. Postoperative outcomes were successful in all 13 patients (100%); median follow-up was 19.1 months. Laparoscopic UU was found to be feasible and safe for the management of midureteral obstruction in children.

  1. Integrating end-to-end threads of control into object-oriented analysis and design

    NASA Technical Reports Server (NTRS)

    Mccandlish, Janet E.; Macdonald, James R.; Graves, Sara J.

    1993-01-01

    Current object-oriented analysis and design methodologies fall short in their use of mechanisms for identifying threads of control for the system being developed. The scenarios which typically describe a system are more global than looking at the individual objects and representing their behavior. Unlike conventional methodologies that use data flow and process-dependency diagrams, object-oriented methodologies do not provide a model for representing these global threads end-to-end. Tracing through threads of control is key to ensuring that a system is complete and timing constraints are addressed. The existence of multiple threads of control in a system necessitates a partitioning of the system into processes. This paper describes the application and representation of end-to-end threads of control to the object-oriented analysis and design process using object-oriented constructs. The issue of representation is viewed as a grouping problem, that is, how to group classes/objects at a higher level of abstraction so that the system may be viewed as a whole with both classes/objects and their associated dynamic behavior. Existing object-oriented development methodology techniques are extended by adding design-level constructs termed logical composite classes and process composite classes. Logical composite classes are design-level classes which group classes/objects both logically and by thread of control information. Process composite classes further refine the logical composite class groupings by using process partitioning criteria to produce optimum concurrent execution results. The goal of these design-level constructs is to ultimately provide the basis for a mechanism that can support the creation of process composite classes in an automated way. Using an automated mechanism makes it easier to partition a system into concurrently executing elements that can be run in parallel on multiple processors.

  2. Early Experience of Robot-Assisted Esophagectomy With Circular End-to-End Stapled Anastomosis.

    PubMed

    Wee, Jon O; Bravo-Iñiguez, Carlos E; Jaklitsch, Michael T

    2016-07-01

    Surgical resection is a critical element in the treatment of esophageal cancer. Esophagectomy is technically challenging and is associated with high morbidity and mortality rates. Efforts to reduce these rates have spurred the adoption of minimally invasive techniques. This study describes a single-institution experience of robot-assisted esophagectomy with circular end-to-end stapled anastomosis. Between December 2013 and April 2015, a series of consecutive patients underwent robot-assisted Ivor Lewis esophagectomy with circular end-to-end anastomosis (RAILE-EEA) at a tertiary care center with curative intent. We retrospectively reviewed their electronic medical records using real-time prospectively collected data. The operative and postoperative outcomes were recorded. Twenty patients underwent RAILE-EEA during the study period. The abdominal mobilization was performed laparoscopically, and the thoracic portion was robotic. The median total operative time was 455 minutes (range, 318-765 minutes), the 90-day operative mortality was 0%, and morbidity was present in 11 of 20 patients (55%). Atrial fibrillation was the most common event and was observed in 3 patients (15%). There were no anastomotic leaks. The median estimated blood loss was 275 mL, and the conversion rate was 0%. Complete (R0) resection was achieved in all cases. The mean number of lymph nodes was 23.2 (± 2.26). The median follow-up time was 330 days (range, 108-600 days), and the overall 1-year survival was 84%. RAILE-EEA in our institution suggests a safe, effective, and reproducible alternative with satisfactory postoperative outcomes for the treatment of esophageal cancer. It provided good local control, adequate lymphadenectomy, low morbidity, and low 90-day operative mortality. Copyright © 2016 The Society of Thoracic Surgeons. Published by Elsevier Inc. All rights reserved.

  3. Development and evaluation of an end-to-end test for head and neck IMRT with a novel multiple-dosimetric modality phantom.

    PubMed

    Zakjevskii, Viatcheslav V; Knill, Cory S; Rakowski, Joseph T; Snyder, Michael G

    2016-03-01

    A comprehensive end-to-end test for head and neck IMRT treatments was developed using a custom phantom designed to utilize multiple dosimetry devices. Initial end-to-end test and custom H&N phantom were designed to yield maximum information in anatomical regions significant to H&N plans with respect to: (i) geometric accuracy, (ii) dosimetric accuracy, and (iii) treatment reproducibility. The phantom was designed in collaboration with Integrated Medical Technologies. The phantom was imaged on a CT simulator and the CT was reconstructed with 1 mm slice thickness and imported into Varian's Eclipse treatment planning system. OARs and the PTV were contoured with the aid of Smart Segmentation. A clinical template was used to create an eight-field IMRT plan and dose was calculated with heterogeneity correction on. Plans were delivered with a TrueBeam equipped with a high definition MLC. Preliminary end-to-end results were measured using film, ion chambers, and optically stimulated luminescent dosimeters (OSLDs). Ion chamber dose measurements were compared to the treatment planning system. Films were analyzed with FilmQA Pro using composite gamma index. OSLDs were read with a MicroStar reader using a custom calibration curve. Final phantom design incorporated two axial and one coronal film planes with 18 OSLD locations adjacent to those planes as well as four locations for IMRT ionization chambers below inferior film plane. The end-to-end test was consistently reproducible, resulting in average gamma pass rate greater than 99% using 3%/3 mm analysis criteria, and average OSLD and ion chamber measurements within 1% of planned dose. After initial calibration of OSLD and film systems, the end-to-end test provides next-day results, allowing for integration in routine clinical QA. Preliminary trials have demonstrated that our end-to-end is a reproducible QA tool that enables the ongoing evaluation of dosimetric and geometric accuracy of clinical head and neck treatments. PACS

  4. Smoothing spline primordial power spectrum reconstruction

    SciTech Connect

    Sealfon, Carolyn; Verde, Licia; Jimenez, Raul

    2005-11-15

    We reconstruct the shape of the primordial power spectrum (PPS) using a smoothing spline. Our adapted smoothing spline technique provides a complementary method to existing efforts to search for smooth features in the PPS, such as a running spectral index. With this technique we find no significant indication with Wilkinson Microwave Anisotropy Probe first-year data that the PPS deviates from a Harrison-Zeldovich spectrum and no evidence for loss of power on large scales. We also examine the effect on the cosmological parameters of the additional PPS freedom. Smooth variations in the PPS are not significantly degenerate with other cosmological parameters, but the spline reconstruction greatly increases the errors on the optical depth and baryon fraction.

  5. Healing process of the guinea pig common bile duct after end-to-end anastomosis: pathological evaluation after 6 months.

    PubMed

    Zhang, X; Tian, Y; Xu, Z; Wang, L; Hou, C; Ling, X

    2011-01-01

    The healing process of an injured bile duct is always associated with stricture formation, the specific mechanism of which remains unclear. Our objective in this study was to establish a guinea pig common bile duct end-to-end anastomosis (EEA) model after total transection of the common bile duct and to assess the postoperative healing process after 6 months. Thirty-two male guinea pigs were randomly divided into 4 groups with or without operation (a control group without operation and 3 groups examined 2, 3 and 6 months after biliary EEA reconstruction, respectively). Histological, immunohistochemical (proliferating cell nuclear antigen, α-smooth muscle actin, h-caldesmon, and Bcl-2 expression) and ultrastructural characteristics were examined and evaluated. Myofibroblasts (MFBs) were differentiated from smooth muscle cells by α-SMA and h-caldesmon staining. Gross inspection of operated bile ducts revealed coarctation formation at the anastomotic stoma. Histological and immunohistochemical examinations showed significant inflammatory reaction, the presence of MFBs, epithelial proliferation and glandular element hyperplasia. Bcl-2 expression decreased in groups 2 and 3, indicating an epithelial self-protecting mechanism. A guinea pig common bile duct EEA model was successfully established. Glandular elements, bile duct epithelial cells and MFBs all played crucial roles in the bile duct healing process. It seems important to elucidate the pathomechanisms of these components for restoring bile duct physiological function. Copyright © 2011 S. Karger AG, Basel.

  6. End-to-end test of spatial accuracy in Gamma Knife treatments for trigeminal neuralgia

    SciTech Connect

    Brezovich, Ivan A. Wu, Xingen; Duan, Jun; Popple, Richard A.; Shen, Sui; Benhabib, Sidi; Huang, Mi; Christian Dobelbower, M.; Fisher III, Winfield S.

    2014-11-01

    Purpose: Spatial accuracy is most crucial when small targets like the trigeminal nerve are treated. Although current quality assurance procedures typically verify that individual apparatus, like the MRI scanner, CT scanner, Gamma Knife, etc., are meeting specifications, the cumulative error of all equipment and procedures combined may exceed safe margins. This study uses an end-to-end approach to assess the overall targeting errors that may have occurred in individual patients previously treated for trigeminal neuralgia. Methods: The trigeminal nerve is simulated by a 3 mm long, 3.175 mm (1/8 in.) diameter MRI-contrast filled cavity embedded within a PMMA plastic capsule. The capsule is positioned within the head frame such that the location of the cavity matches the Gamma Knife coordinates of an arbitrarily chosen, previously treated patient. Gafchromic EBT2 film is placed at the center of the cavity in coronal and sagittal orientations. The films are marked with a pinprick to identify the cavity center. Treatments are planned for radiation delivery with 4 mm collimators according to MRI and CT scans using the clinical localizer boxes and acquisition protocols. Shots are planned so that the 50% isodose surface encompasses the cavity. Following irradiation, the films are scanned and analyzed. Targeting errors are defined as the distance between the pinprick, which represents the intended target, and the centroid of the 50% isodose line, which is the center of the radiation field that was actually delivered. Results: Averaged over ten patient simulations, targeting errors along the x, y, and z coordinates (patient’s left-to-right, posterior-to-anterior, and head-to-foot) were, respectively, −0.060 ± 0.363, −0.350 ± 0.253, and 0.348 ± 0.204 mm when MRI was used for treatment planning. Planning according to CT exhibited generally smaller errors, namely, 0.109 ± 0.167, −0.191 ± 0.144, and 0.211 ± 0.094 mm. The largest errors along individual axes in MRI

  7. Direct muscle neurotization after end-to end and end-to-side neurorrhaphy: An experimental study in the rat forelimb model.

    PubMed

    Papalia, Igor; Ronchi, Giulia; Muratori, Luisa; Mazzucco, Alessandra; Magaudda, Ludovico; Geuna, Stefano

    2012-10-15

    The need for the continuous research of new tools for improving motor function recovery after nerve injury is justified by the still often unsatisfactory clinical outcome in these patients. It has been previously shown that the combined use of two reconstructive techniques, namely end-to-side neurorrhaphy and direct muscle neurotization in the rat hindlimb model, can lead to good results in terms of skeletal muscle reinnervation. Here we show that, in the rat forelimb model, the combined use of direct muscle neurotization with either end-to-end or end-to-side neurorrhaphy to reinnervate the denervated flexor digitorum muscles, leads to muscle atrophy prevention over a long postoperative time lapse (10 months). By contrast, very little motor recovery (in case of end-to-end neurorrhaphy) and almost no motor recovery (in case of end-to-side neurorrhaphy) were observed in the grasping activity controlled by flexor digitorum muscles. It can thus be concluded that, at least in the rat, direct muscle neurotization after both end-to-end and end-to-side neurorrhaphy represents a good strategy for preventing denervation-related muscle atrophy but not for regaining the lost motor function.

  8. Fistulotomy with end-to-end primary sphincteroplasty for anal fistula: results from a prospective study.

    PubMed

    Ratto, Carlo; Litta, Francesco; Parello, Angelo; Zaccone, Giuseppe; Donisi, Lorenza; De Simone, Veronica

    2013-02-01

    Fistulotomy plus primary sphincteroplasty for complex anal fistulas is regarded with scepticism, mainly because of the risk of postoperative incontinence. The aim of this study was to evaluate safety and effectiveness of this technique in medium-term follow up and to identify potential predictive factors of success and postoperative continence impairment. This was a prospective observational study conducted at a tertiary care university hospital in Italy. A total of 72 patients with complex anal fistula of cryptoglandular origin underwent fistulotomy and end-to-end primary sphincteroplasty; patients were followed up at 1 week, 1 and 3 months, 1 year, and were invited to participate in a recent follow-up session. Success regarding healing of the fistula was assessed with 3-dimensional endoanal ultrasound and clinical evaluation. Continence status was evaluated using the Cleveland Clinic fecal incontinence score and by patient report of post-defecation soiling. Of the 72 patients, 12 (16.7%) had recurrent fistulas and 29 patients (40.3%) had undergone seton drainage before definitive surgery. At a mean follow-up of 29.4 (SD, 23.7; range, 6-91 months, the success rate of treatment was 95.8% (69 patients). Fistula recurrence was observed in 3 patients at a mean of 17.3 (SD, 10.3; range, 6-26) months of follow-up. Cleveland Clinic fecal incontinence score did not change significantly (p = 0.16). Eight patients (11.6% of those with no baseline incontinence) reported de novo postdefecation soiling. None of the investigated factors was a significant predictor of success. Patients with recurrent fistula after previous fistula surgery had a 5-fold increased probability of having impaired continence (relative risk = 5.00, 95% CI, 1.45-17.27, p = 0.02). The study was limited by potential single-institution bias, lack of anorectal manometry, and lack of quality of life assessment. Fistulotomy with end-to-end primary sphincteroplasty can be considered to be an effective

  9. Changes in end-to-end interactions of tropomyosin affect mouse cardiac muscle dynamics.

    PubMed

    Gaffin, Robert D; Gokulan, Kuppan; Sacchettini, James C; Hewett, Timothy E; Klevitsky, Raisa; Robbins, Jeffrey; Sarin, Vandana; Zawieja, David C; Meininger, Gerald A; Muthuchamy, Mariappan

    2006-08-01

    The ends of striated muscle tropomyosin (TM) are integral for thin filament cooperativity, determining the cooperative unit size and regulating the affinity of TM for actin. We hypothesized that altering the alpha-TM carboxy terminal overlap end to the beta-TM counterpart would affect the amino-terminal association, which would alter the end-to-end interactions of TM molecules in the thin filament regulatory strand and affect the mechanisms of cardiac muscle contraction. To test this hypothesis, we generated transgenic (TG) mouse lines that express a mutant form of alpha-TM in which the first 275 residues are from alpha-TM and the last nine amino acids are from beta-TM (alpha-TM9aaDeltabeta). Molecular analyses show that endogenous alpha-TM mRNA and protein are nearly completely replaced with alpha-TM9aaDeltabeta. Working heart preparations data show that the rates of contraction and relaxation are reduced in alpha-TM9aaDeltabeta hearts. Left ventricular pressure and time to peak pressure are also reduced (-12% and -13%, respectively). The ratio of maximum to minimum first derivatives of change in left ventricular systolic pressure with respect to time (ratio of +dP/dt to -dP/dt, respectively) is increased, but tau is not changed significantly. Force-intracellular calcium concentration ([Ca2+]i) measurements from intact papillary fibers demonstrate that alpha-TM9aaDeltabeta TG fibers produce less force per given [Ca2+]i compared with nontransgenic fibers. Taken together, the data demonstrate that the rate of contraction is primarily affected in TM TG hearts. Protein docking studies show that in the mutant molecule, the overall carbon backbone is perturbed about 1.5 A, indicating that end-to-end interactions are altered. These results demonstrate that the localized flexibility present in the coiled-coil structures of TM isoforms is different, and that plays an important role in interacting with neighboring thin filament regulatory proteins and with differentially

  10. Internet end-to-end performance monitoring for the High Energy Nuclear and Particle Physics community

    SciTech Connect

    Matthews, W.

    2000-02-22

    Modern High Energy Nuclear and Particle Physics (HENP) experiments at Laboratories around the world present a significant challenge to wide area networks. Petabytes (1015) or exabytes (1018) of data will be generated during the lifetime of the experiment. Much of this data will be distributed via the Internet to the experiment's collaborators at Universities and Institutes throughout the world for analysis. In order to assess the feasibility of the computing goals of these and future experiments, the HENP networking community is actively monitoring performance across a large part of the Internet used by its collaborators. Since 1995, the pingER project has been collecting data on ping packet loss and round trip times. In January 2000, there are 28 monitoring sites in 15 countries gathering data on over 2,000 end-to-end pairs. HENP labs such as SLAC, Fermi Lab and CERN are using Advanced Network's Surveyor project and monitoring performance from one-way delay of UDP packets. More recently several HENP sites have become involved with NLANR's active measurement program (AMP). In addition SLAC and CERN are part of the RIPE test-traffic project and SLAC is home for a NIMI machine. The large End-to-end performance monitoring infrastructure allows the HENP networking community to chart long term trends and closely examine short term glitches across a wide range of networks and connections. The different methodologies provide opportunities to compare results based on different protocols and statistical samples. Understanding agreement and discrepancies between results provides particular insight into the nature of the network. This paper will highlight the practical side of monitoring by reviewing the special needs of High Energy Nuclear and Particle Physics experiments and provide an overview of the experience of measuring performance across a large number of interconnected networks throughout the world with various methodologies. In particular, results from each project

  11. Towards end-to-end models for investigating the effects of climate and fishing in marine ecosystems

    NASA Astrophysics Data System (ADS)

    Travers, M.; Shin, Y.-J.; Jennings, S.; Cury, P.

    2007-12-01

    End-to-end models that represent ecosystem components from primary producers to top predators, linked through trophic interactions and affected by the abiotic environment, are expected to provide valuable tools for assessing the effects of climate change and fishing on ecosystem dynamics. Here, we review the main process-based approaches used for marine ecosystem modelling, focusing on the extent of the food web modelled, the forcing factors considered, the trophic processes represented, as well as the potential use and further development of the models. We consider models of a subset of the food web, models which represent the first attempts to couple low and high trophic levels, integrated models of the whole ecosystem, and size spectrum models. Comparisons within and among these groups of models highlight the preferential use of functional groups at low trophic levels and species at higher trophic levels and the different ways in which the models account for abiotic processes. The model comparisons also highlight the importance of choosing an appropriate spatial dimension for representing organism dynamics. Many of the reviewed models could be extended by adding components and by ensuring that the full life cycles of species components are represented, but end-to-end models should provide full coverage of ecosystem components, the integration of physical and biological processes at different scales and two-way interactions between ecosystem components. We suggest that this is best achieved by coupling models, but there are very few existing cases where the coupling supports true two-way interaction. The advantages of coupling models are that the extent of discretization and representation can be targeted to the part of the food web being considered, making their development time- and cost-effective. Processes such as predation can be coupled to allow the propagation of forcing factors effects up and down the food web. However, there needs to be a stronger focus

  12. Availability and End-to-end Reliability in Low Duty Cycle Multihop Wireless Sensor Networks.

    PubMed

    Suhonen, Jukka; Hämäläinen, Timo D; Hännikäinen, Marko

    2009-01-01

    A wireless sensor network (WSN) is an ad-hoc technology that may even consist of thousands of nodes, which necessitates autonomic, self-organizing and multihop operations. A typical WSN node is battery powered, which makes the network lifetime the primary concern. The highest energy efficiency is achieved with low duty cycle operation, however, this alone is not enough. WSNs are deployed for different uses, each requiring acceptable Quality of Service (QoS). Due to the unique characteristics of WSNs, such as dynamic wireless multihop routing and resource constraints, the legacy QoS metrics are not feasible as such. We give a new definition to measure and implement QoS in low duty cycle WSNs, namely availability and reliability. Then, we analyze the effect of duty cycling for reaching the availability and reliability. The results are obtained by simulations with ZigBee and proprietary TUTWSN protocols. Based on the results, we also propose a data forwarding algorithm suitable for resource constrained WSNs that guarantees end-to-end reliability while adding a small overhead that is relative to the packet error rate (PER). The forwarding algorithm guarantees reliability up to 30% PER.

  13. SPOKES: An end-to-end simulation facility for spectroscopic cosmological surveys

    NASA Astrophysics Data System (ADS)

    Nord, B.; Amara, A.; Réfrégier, A.; Gamper, La.; Gamper, Lu.; Hambrecht, B.; Chang, C.; Forero-Romero, J. E.; Serrano, S.; Cunha, C.; Coles, O.; Nicola, A.; Busha, M.; Bauer, A.; Saunders, W.; Jouvel, S.; Kirk, D.; Wechsler, R.

    2016-04-01

    The nature of dark matter, dark energy and large-scale gravity pose some of the most pressing questions in cosmology today. These fundamental questions require highly precise measurements, and a number of wide-field spectroscopic survey instruments are being designed to meet this requirement. A key component in these experiments is the development of a simulation tool to forecast science performance, define requirement flow-downs, optimize implementation, demonstrate feasibility, and prepare for exploitation. We present SPOKES (SPectrOscopic KEn Simulation), an end-to-end simulation facility for spectroscopic cosmological surveys designed to address this challenge. SPOKES is based on an integrated infrastructure, modular function organization, coherent data handling and fast data access. These key features allow reproducibility of pipeline runs, enable ease of use and provide flexibility to update functions within the pipeline. The cyclic nature of the pipeline offers the possibility to make the science output an efficient measure for design optimization and feasibility testing. We present the architecture, first science, and computational performance results of the simulation pipeline. The framework is general, but for the benchmark tests, we use the Dark Energy Spectrometer (DESpec), one of the early concepts for the upcoming project, the Dark Energy Spectroscopic Instrument (DESI). We discuss how the SPOKES framework enables a rigorous process to optimize and exploit spectroscopic survey experiments in order to derive high-precision cosmological measurements optimally.

  14. End-to-end differential contactless conductivity sensor for microchip capillary electrophoresis.

    PubMed

    Fercher, Georg; Haller, Anna; Smetana, Walter; Vellekoop, Michael J

    2010-04-15

    In this contribution, a novel measurement approach for miniaturized capillary electrophoresis (CE) devices is presented: End-to-end differential capacitively coupled contactless conductivity measurement. This measurement technique is applied to a miniaturized CE device fabricated in low-temperature cofired ceramics (LTCC) multilayer technology. The working principle is based on the placement of two distinct detector areas near both ends of the fluid inlet and outlet of the separation channel. Both output signals are subtracted from each other, and the resulting differential signal is amplified and measured. This measurement approach has several advantages over established, single-end detectors: The high baseline level resulting from parasitic stray capacitance and buffer conductivity is reduced, leading to better signal-to-noise ratio and hence higher measurement sensitivity. Furthermore, temperature and, thus, baseline drift effects are diminished owing to the differentiating nature of the system. By comparing the peak widths measured with both detectors, valuable information about zone dispersion effects arising during the separation is obtained. Additionally, the novel measurement scheme allows the determination of dispersion effects that occur at the time of sample injection. Optical means of dispersion evaluation are ineffective because of the opaque LTCC substrate. Electrophoretic separation experiments of inorganic ions show sensitivity enhancements by about a factor of 30-60 compared to the single-end measurement scheme.

  15. End-to-end performance modeling of passive remote sensing systems

    SciTech Connect

    Smith, B.W.; Borel, C.C.; Clodius, W.B.; Theiler, J.; Laubscher, B.; Weber, P.G.

    1996-07-01

    The ultimate goal of end-to-end system modeling is to simulate all known physical effects which determine the content of the data, before flying an instrument system. In remote sensing, one begins with a scene, viewed either statistically or dynamically, computes the radiance in each spectral band, renders the scene, transfers it through representative atmospheres to create the radiance field at an aperture, and integrates over sensor pixels. We have simulated a comprehensive sequence of realistic instrument hardware elements and the transfer of simulated data to an analysis system. This analysis package is the same as that intended for use of data collections from the real system. By comparing the analyzed image to the original scene, the net effect of nonideal system components can be understood. Iteration yields the optimum values of system parameters to achieve performance targets. We have used simulation to develop and test improved multispectral algorithms for (1) the robust retrieval of water surface temperature, water vapor column, and other quantities; (2) the preservation of radiometric accuracy during atmospheric correction and pixel registration on the ground; and (3) exploitation of on-board multispectral measurements to assess the atmosphere between ground and aperture.

  16. Semantic Complex Event Processing over End-to-End Data Flows

    SciTech Connect

    Zhou, Qunzhi; Simmhan, Yogesh; Prasanna, Viktor K.

    2012-04-01

    Emerging Complex Event Processing (CEP) applications in cyber physical systems like SmartPower Grids present novel challenges for end-to-end analysis over events, flowing from heterogeneous information sources to persistent knowledge repositories. CEP for these applications must support two distinctive features - easy specification patterns over diverse information streams, and integrated pattern detection over realtime and historical events. Existing work on CEP has been limited to relational query patterns, and engines that match events arriving after the query has been registered. We propose SCEPter, a semantic complex event processing framework which uniformly processes queries over continuous and archived events. SCEPteris built around an existing CEP engine with innovative support for semantic event pattern specification and allows their seamless detection over past, present and future events. Specifically, we describe a unified semantic query model that can operate over data flowing through event streams to event repositories. Compile-time and runtime semantic patterns are distinguished and addressed separately for efficiency. Query rewriting is examined and analyzed in the context of temporal boundaries that exist between event streams and their repository to avoid duplicate or missing results. The design and prototype implementation of SCEPterare analyzed using latency and throughput metrics for scenarios from the Smart Grid domain.

  17. An end-to-end assessment of range uncertainty in proton therapy using animal tissues

    NASA Astrophysics Data System (ADS)

    Zheng, Yuanshui; Kang, Yixiu; Zeidan, Omar; Schreuder, Niek

    2016-11-01

    Accurate assessment of range uncertainty is critical in proton therapy. However, there is a lack of data and consensus on how to evaluate the appropriate amount of uncertainty. The purpose of this study is to quantify the range uncertainty in various treatment conditions in proton therapy, using transmission measurements through various animal tissues. Animal tissues, including a pig head, beef steak, and lamb leg, were used in this study. For each tissue, an end-to-end test closely imitating patient treatments was performed. This included CT scan simulation, treatment planning, image-guided alignment, and beam delivery. Radio-chromic films were placed at various depths in the distal dose falloff region to measure depth dose. Comparisons between measured and calculated doses were used to evaluate range differences. The dose difference at the distal falloff between measurement and calculation depends on tissue type and treatment conditions. The estimated range difference was up to 5, 6 and 4 mm for the pig head, beef steak, and lamb leg irradiation, respectively. Our study shows that the TPS was able to calculate proton range within about 1.5% plus 1.5 mm. Accurate assessment of range uncertainty in treatment planning would allow better optimization of proton beam treatment, thus fully achieving proton beams’ superior dose advantage over conventional photon-based radiation therapy.

  18. A Workflow-based Intelligent Network Data Movement Advisor with End-to-end Performance Optimization

    SciTech Connect

    Zhu, Michelle M.; Wu, Chase Q.

    2013-11-07

    Next-generation eScience applications often generate large amounts of simulation, experimental, or observational data that must be shared and managed by collaborative organizations. Advanced networking technologies and services have been rapidly developed and deployed to facilitate such massive data transfer. However, these technologies and services have not been fully utilized mainly because their use typically requires significant domain knowledge and in many cases application users are even not aware of their existence. By leveraging the functionalities of an existing Network-Aware Data Movement Advisor (NADMA) utility, we propose a new Workflow-based Intelligent Network Data Movement Advisor (WINDMA) with end-to-end performance optimization for this DOE funded project. This WINDMA system integrates three major components: resource discovery, data movement, and status monitoring, and supports the sharing of common data movement workflows through account and database management. This system provides a web interface and interacts with existing data/space management and discovery services such as Storage Resource Management, transport methods such as GridFTP and GlobusOnline, and network resource provisioning brokers such as ION and OSCARS. We demonstrate the efficacy of the proposed transport-support workflow system in several use cases based on its implementation and deployment in DOE wide-area networks.

  19. An end-to-end analysis of drought from smallholder farms in southwest Jamaica

    NASA Astrophysics Data System (ADS)

    Curtis, W. R. S., III; Gamble, D. W.; Popke, J.

    2015-12-01

    Drought can be defined in many ways: meteorological, hydrological, agricultural, and socio-economic. Another way to approach drought is from a "perception" perspective, where individuals whose livelihood is highly dependent on precipitation take adaptive actions. In this study we use two-years of data collected from twelve smallholder farms in southern St. Elizabeth, Jamaica to undertake an end-to-end analysis of drought. At each farm, 6-hour temperature and soil moisture, and tipping-bucket rainfall were recorded from June 2013 to June 2015, and twice-monthly farmers indicated whether they were experiencing drought and if they irrigated (hand-watering, drip irrigation, or pipe and sprinkler). In many cases half of the farmers considered themselves in a drought, while the others not, even though the largest separation among farms was about 20 km. This study will use analysis of variance to test the following hypotheses: Drought perception is related to a) absolute amounts of precipitation at the time, b) other environmental cues at the time (soil moisture, temperature), or c) relative amounts of precipitation as compared to the same time last year. Irrigation actions and water use following the perception of drought will also be examined.

  20. Availability and End-to-end Reliability in Low Duty Cycle Multihop Wireless Sensor Networks

    PubMed Central

    Suhonen, Jukka; Hämäläinen, Timo D.; Hännikäinen, Marko

    2009-01-01

    A wireless sensor network (WSN) is an ad-hoc technology that may even consist of thousands of nodes, which necessitates autonomic, self-organizing and multihop operations. A typical WSN node is battery powered, which makes the network lifetime the primary concern. The highest energy efficiency is achieved with low duty cycle operation, however, this alone is not enough. WSNs are deployed for different uses, each requiring acceptable Quality of Service (QoS). Due to the unique characteristics of WSNs, such as dynamic wireless multihop routing and resource constraints, the legacy QoS metrics are not feasible as such. We give a new definition to measure and implement QoS in low duty cycle WSNs, namely availability and reliability. Then, we analyze the effect of duty cycling for reaching the availability and reliability. The results are obtained by simulations with ZigBee and proprietary TUTWSN protocols. Based on the results, we also propose a data forwarding algorithm suitable for resource constrained WSNs that guarantees end-to-end reliability while adding a small overhead that is relative to the packet error rate (PER). The forwarding algorithm guarantees reliability up to 30% PER. PMID:22574002

  1. An end-to-end assessment of range uncertainty in proton therapy using animal tissues.

    PubMed

    Zheng, Yuanshui; Kang, Yixiu; Zeidan, Omar; Schreuder, Niek

    2016-11-21

    Accurate assessment of range uncertainty is critical in proton therapy. However, there is a lack of data and consensus on how to evaluate the appropriate amount of uncertainty. The purpose of this study is to quantify the range uncertainty in various treatment conditions in proton therapy, using transmission measurements through various animal tissues. Animal tissues, including a pig head, beef steak, and lamb leg, were used in this study. For each tissue, an end-to-end test closely imitating patient treatments was performed. This included CT scan simulation, treatment planning, image-guided alignment, and beam delivery. Radio-chromic films were placed at various depths in the distal dose falloff region to measure depth dose. Comparisons between measured and calculated doses were used to evaluate range differences. The dose difference at the distal falloff between measurement and calculation depends on tissue type and treatment conditions. The estimated range difference was up to 5, 6 and 4 mm for the pig head, beef steak, and lamb leg irradiation, respectively. Our study shows that the TPS was able to calculate proton range within about 1.5% plus 1.5 mm. Accurate assessment of range uncertainty in treatment planning would allow better optimization of proton beam treatment, thus fully achieving proton beams' superior dose advantage over conventional photon-based radiation therapy.

  2. The X-IFU end-to-end simulations performed for the TES array optimization exercise

    NASA Astrophysics Data System (ADS)

    Peille, Philippe; Wilms, J.; Brand, T.; Cobo, B.; Ceballos, M. T.; Dauser, T.; Smith, S. J.; Barret, D.; den Herder, J. W.; Piro, L.; Barcons, X.; Pointecouteau, E.; Bandler, S.; den Hartog, R.; de Plaa, J.

    2015-09-01

    The focal plane assembly of the Athena X-ray Integral Field Unit (X-IFU) includes as the baseline an array of ~4000 single size calorimeters based on Transition Edge Sensors (TES). Other sensor array configurations could however be considered, combining TES of different properties (e.g. size). In attempting to improve the X-IFU performance in terms of field of view, count rate performance, and even spectral resolution, two alternative TES array configurations to the baseline have been simulated, each combining a small and a large pixel array. With the X-IFU end-to-end simulator, a sub-sample of the Athena core science goals, selected by the X-IFU science team as potentially driving the optimal TES array configuration, has been simulated for the results to be scientifically assessed and compared. In this contribution, we will describe the simulation set-up for the various array configurations, and highlight some of the results of the test cases simulated.

  3. End-To-End Simulation of Launch Vehicle Trajectories Including Stage Separation Dynamics

    NASA Technical Reports Server (NTRS)

    Albertson, Cindy W.; Tartabini, Paul V.; Pamadi, Bandu N.

    2012-01-01

    The development of methodologies, techniques, and tools for analysis and simulation of stage separation dynamics is critically needed for successful design and operation of multistage reusable launch vehicles. As a part of this activity, the Constraint Force Equation (CFE) methodology was developed and implemented in the Program to Optimize Simulated Trajectories II (POST2). The objective of this paper is to demonstrate the capability of POST2/CFE to simulate a complete end-to-end mission. The vehicle configuration selected was the Two-Stage-To-Orbit (TSTO) Langley Glide Back Booster (LGBB) bimese configuration, an in-house concept consisting of a reusable booster and an orbiter having identical outer mold lines. The proximity and isolated aerodynamic databases used for the simulation were assembled using wind-tunnel test data for this vehicle. POST2/CFE simulation results are presented for the entire mission, from lift-off, through stage separation, orbiter ascent to orbit, and booster glide back to the launch site. Additionally, POST2/CFE stage separation simulation results are compared with results from industry standard commercial software used for solving dynamics problems involving multiple bodies connected by joints.

  4. Forming End-to-End Oligomers of Gold Nanorods Using Porphyrins and Phthalocyanines.

    PubMed

    Stewart, Alexander F; Gagnon, Brandon P; Walker, Gilbert C

    2015-06-23

    The illumination of aggregated metal nanospecies can create strong local electric fields to brighten Raman scattering. This study describes a procedure to self-assemble gold nanorods (NRs) through the use of porphyrin and phthalocyanine agents to create reproducibly stable and robust NR aggregates in the form of end-to-end oligomers. Narrow inter-rod gaps result, creating electric field "hot spots" between the NRs. The organic linker molecules themselves are potential Raman-based optical labels, and the result is significant numbers of Raman-active species located in the hot spots. NR polymerization was quenched by phospholipid encapsulation, which allows for control of the polydispersity of the aggregate solution, to optimize the surface-enhanced Raman scattering (SERS) enhancement and permitted the aqueous solubility of the aggregates. The increased presence of Raman-active species in the hot spots and the optimizing of solution polydispersity resulted in the observation of scattering enhancements by encapsulated porphyrins/phthalocyanines of up to 3500-fold over molecular chromophores lacking the NR oligomer host.

  5. End to End Digitisation and Analysis of Three-Dimensional Coral Models, from Communities to Corallites

    PubMed Central

    Gutierrez-Heredia, Luis; Benzoni, Francesca; Murphy, Emma; Reynaud, Emmanuel G.

    2016-01-01

    Coral reefs hosts nearly 25% of all marine species and provide food sources for half a billion people worldwide while only a very small percentage have been surveyed. Advances in technology and processing along with affordable underwater cameras and Internet availability gives us the possibility to provide tools and softwares to survey entire coral reefs. Holistic ecological analyses of corals require not only the community view (10s to 100s of meters), but also the single colony analysis as well as corallite identification. As corals are three-dimensional, classical approaches to determine percent cover and structural complexity across spatial scales are inefficient, time-consuming and limited to experts. Here we propose an end-to-end approach to estimate these parameters using low-cost equipment (GoPro, Canon) and freeware (123D Catch, Meshmixer and Netfabb), allowing every community to participate in surveys and monitoring of their coral ecosystem. We demonstrate our approach on 9 species of underwater colonies in ranging size and morphology. 3D models of underwater colonies, fresh samples and bleached skeletons with high quality texture mapping and detailed topographic morphology were produced, and Surface Area and Volume measurements (parameters widely used for ecological and coral health studies) were calculated and analysed. Moreover, we integrated collected sample models with micro-photogrammetry models of individual corallites to aid identification and colony and polyp scale analysis. PMID:26901845

  6. An end-to-end architecture for distributing weather alerts to wireless handsets

    NASA Astrophysics Data System (ADS)

    Jones, Karen L.; Nguyen, Hung

    2005-06-01

    This paper describes the current National Weather Service's (NWS) system for providing weather alerts in the U.S. and will review how the existing end-to-end architecture is being leveraged to provide non-weather alerts, also known as "all-hazard alerts", to the general public. The paper then describes how a legacy system that transmits weather and all-hazard alerts can be extended via commercial wireless networks and protocols to reach 154 million Americans who carry cell phones. This approach uses commercial SATCOM and existing wireless carriers and services such as Short Messaging Service (SMS) for text and emerging Multimedia Messaging Service (MMS) protocol, which would allow for photos, maps, audio and video alerts to be sent to end users. This wireless broadcast alert delivery architecture is designed to be open and to embrace the National Weather Service's mandate to become an "" warning system for the general public. Examples of other public and private sector applications that require timely and intelligent push mechanisms using this alert dissemination approach are also given.

  7. Characterisation of residual ionospheric errors in bending angles using GNSS RO end-to-end simulations

    NASA Astrophysics Data System (ADS)

    Liu, C. L.; Kirchengast, G.; Zhang, K. F.; Norman, R.; Li, Y.; Zhang, S. C.; Carter, B.; Fritzer, J.; Schwaerz, M.; Choy, S. L.; Wu, S. Q.; Tan, Z. X.

    2013-09-01

    Global Navigation Satellite System (GNSS) radio occultation (RO) is an innovative meteorological remote sensing technique for measuring atmospheric parameters such as refractivity, temperature, water vapour and pressure for the improvement of numerical weather prediction (NWP) and global climate monitoring (GCM). GNSS RO has many unique characteristics including global coverage, long-term stability of observations, as well as high accuracy and high vertical resolution of the derived atmospheric profiles. One of the main error sources in GNSS RO observations that significantly affect the accuracy of the derived atmospheric parameters in the stratosphere is the ionospheric error. In order to mitigate the effect of this error, the linear ionospheric correction approach for dual-frequency GNSS RO observations is commonly used. However, the residual ionospheric errors (RIEs) can be still significant, especially when large ionospheric disturbances occur and prevail such as during the periods of active space weather. In this study, the RIEs were investigated under different local time, propagation direction and solar activity conditions and their effects on RO bending angles are characterised using end-to-end simulations. A three-step simulation study was designed to investigate the characteristics of the RIEs through comparing the bending angles with and without the effects of the RIEs. This research forms an important step forward in improving the accuracy of the atmospheric profiles derived from the GNSS RO technique.

  8. SPOKES: An end-to-end simulation facility for spectroscopic cosmological surveys

    DOE PAGES

    Nord, B.; Amara, A.; Refregier, A.; ...

    2016-03-03

    The nature of dark matter, dark energy and large-scale gravity pose some of the most pressing questions in cosmology today. These fundamental questions require highly precise measurements, and a number of wide-field spectroscopic survey instruments are being designed to meet this requirement. A key component in these experiments is the development of a simulation tool to forecast science performance, define requirement flow-downs, optimize implementation, demonstrate feasibility, and prepare for exploitation. We present SPOKES (SPectrOscopic KEn Simulation), an end-to-end simulation facility for spectroscopic cosmological surveys designed to address this challenge. SPOKES is based on an integrated infrastructure, modular function organization, coherentmore » data handling and fast data access. These key features allow reproducibility of pipeline runs, enable ease of use and provide flexibility to update functions within the pipeline. The cyclic nature of the pipeline offers the possibility to make the science output an efficient measure for design optimization and feasibility testing. We present the architecture, first science, and computational performance results of the simulation pipeline. The framework is general, but for the benchmark tests, we use the Dark Energy Spectrometer (DESpec), one of the early concepts for the upcoming project, the Dark Energy Spectroscopic Instrument (DESI). As a result, we discuss how the SPOKES framework enables a rigorous process to optimize and exploit spectroscopic survey experiments in order to derive high-precision cosmological measurements optimally.« less

  9. New Development in WARP: Progress Toward End-to-End Simulation

    SciTech Connect

    Grote, D.P.; Friedman, A.; Haber, I.; Fawley, W.; Luc Vay, J.

    1997-11-07

    The development of a high current, heavy-ion beam driver for inertial confinement fusion requires a detailed understanding of the behavior of the beam, including effects of the strong self-fields. The necessity of including the self-fields of the beam makes particle-in-cell (PIC) simulation techniques ideal, and for this reason, the multi-dimensional PIC/accelerator code WARP has been developed. WARP has been used extensively to study the creation and propagation of ion beams both in experiments and for the understanding of basic beam physics. An overview of the structure of the code will be presented along with a discussion of features that make the code an effective tool in the understanding of space-charge dominated beam behavior. Much development has been done on WARP increasing its flexibility and generality. Major additions include a generalized field description, an efficient steady-state modelling technique, a transverse slice model with a bending algorithm, further improvement of the parallel processing version, and capabilities for linking to chamber transport codes. With these additions, the capability of modeling a large scale accelerator from end-to-end comes closer to reality.

  10. End-to-end simulation of bunch merging for a muon collider

    SciTech Connect

    Bao, Yu; Stratakis, Diktys; Hanson, Gail G.; Palmer, Robert B.

    2015-05-03

    Muon accelerator beams are commonly produced indirectly through pion decay by interaction of a charged particle beam with a target. Efficient muon capture requires the muons to be first phase-rotated by rf cavities into a train of 21 bunches with much reduced energy spread. Since luminosity is proportional to the square of the number of muons per bunch, it is crucial for a Muon Collider to use relatively few bunches with many muons per bunch. In this paper we will describe a bunch merging scheme that should achieve this goal. We present for the first time a complete end-to-end simulation of a 6D bunch merger for a Muon Collider. The 21 bunches arising from the phase-rotator, after some initial cooling, are merged in longitudinal phase space into seven bunches, which then go through seven paths with different lengths and reach the final collecting "funnel" at the same time. The final single bunch has a transverse and a longitudinal emittance that matches well with the subsequent 6D rectilinear cooling scheme.

  11. SPOKES: An end-to-end simulation facility for spectroscopic cosmological surveys

    SciTech Connect

    Nord, B.; Amara, A.; Refregier, A.; Gamper, La.; Gamper, Lu.; Hambrecht, B.; Chang, C.; Forero-Romero, J. E.; Serrano, S.; Cunha, C.; Coles, O.; Nicola, A.; Busha, M.; Bauer, A.; Saunders, W.; Jouvel, S.; Kirk, D.; Wechsler, R.

    2016-03-03

    The nature of dark matter, dark energy and large-scale gravity pose some of the most pressing questions in cosmology today. These fundamental questions require highly precise measurements, and a number of wide-field spectroscopic survey instruments are being designed to meet this requirement. A key component in these experiments is the development of a simulation tool to forecast science performance, define requirement flow-downs, optimize implementation, demonstrate feasibility, and prepare for exploitation. We present SPOKES (SPectrOscopic KEn Simulation), an end-to-end simulation facility for spectroscopic cosmological surveys designed to address this challenge. SPOKES is based on an integrated infrastructure, modular function organization, coherent data handling and fast data access. These key features allow reproducibility of pipeline runs, enable ease of use and provide flexibility to update functions within the pipeline. The cyclic nature of the pipeline offers the possibility to make the science output an efficient measure for design optimization and feasibility testing. We present the architecture, first science, and computational performance results of the simulation pipeline. The framework is general, but for the benchmark tests, we use the Dark Energy Spectrometer (DESpec), one of the early concepts for the upcoming project, the Dark Energy Spectroscopic Instrument (DESI). As a result, we discuss how the SPOKES framework enables a rigorous process to optimize and exploit spectroscopic survey experiments in order to derive high-precision cosmological measurements optimally.

  12. Advanced end-to-end fiber optic sensing systems for demanding environments

    NASA Astrophysics Data System (ADS)

    Black, Richard J.; Moslehi, Behzad

    2010-09-01

    Optical fibers are small-in-diameter, light-in-weight, electromagnetic-interference immune, electrically passive, chemically inert, flexible, embeddable into different materials, and distributed-sensing enabling, and can be temperature and radiation tolerant. With appropriate processing and/or packaging, they can be very robust and well suited to demanding environments. In this paper, we review a range of complete end-to-end fiber optic sensor systems that IFOS has developed comprising not only (1) packaged sensors and mechanisms for integration with demanding environments, but (2) ruggedized sensor interrogators, and (3) intelligent decision aid algorithms software systems. We examine the following examples: " Fiber Bragg Grating (FBG) optical sensors systems supporting arrays of environmentally conditioned multiplexed FBG point sensors on single or multiple optical fibers: In conjunction with advanced signal processing, decision aid algorithms and reasoners, FBG sensor based structural health monitoring (SHM) systems are expected to play an increasing role in extending the life and reducing costs of new generations of aerospace systems. Further, FBG based structural state sensing systems have the potential to considerably enhance the performance of dynamic structures interacting with their environment (including jet aircraft, unmanned aerial vehicles (UAVs), and medical or extravehicular space robots). " Raman based distributed temperature sensing systems: The complete length of optical fiber acts as a very long distributed sensor which may be placed down an oil well or wrapped around a cryogenic tank.

  13. End to End Digitisation and Analysis of Three-Dimensional Coral Models, from Communities to Corallites.

    PubMed

    Gutierrez-Heredia, Luis; Benzoni, Francesca; Murphy, Emma; Reynaud, Emmanuel G

    2016-01-01

    Coral reefs hosts nearly 25% of all marine species and provide food sources for half a billion people worldwide while only a very small percentage have been surveyed. Advances in technology and processing along with affordable underwater cameras and Internet availability gives us the possibility to provide tools and softwares to survey entire coral reefs. Holistic ecological analyses of corals require not only the community view (10s to 100s of meters), but also the single colony analysis as well as corallite identification. As corals are three-dimensional, classical approaches to determine percent cover and structural complexity across spatial scales are inefficient, time-consuming and limited to experts. Here we propose an end-to-end approach to estimate these parameters using low-cost equipment (GoPro, Canon) and freeware (123D Catch, Meshmixer and Netfabb), allowing every community to participate in surveys and monitoring of their coral ecosystem. We demonstrate our approach on 9 species of underwater colonies in ranging size and morphology. 3D models of underwater colonies, fresh samples and bleached skeletons with high quality texture mapping and detailed topographic morphology were produced, and Surface Area and Volume measurements (parameters widely used for ecological and coral health studies) were calculated and analysed. Moreover, we integrated collected sample models with micro-photogrammetry models of individual corallites to aid identification and colony and polyp scale analysis.

  14. End-To-End performance test of the LINC-NIRVANA Wavefront-Sensor system.

    NASA Astrophysics Data System (ADS)

    Berwein, Juergen; Bertram, Thomas; Conrad, Al; Briegel, Florian; Kittmann, Frank; Zhang, Xiangyu; Mohr, Lars

    2011-09-01

    LINC-NIRVANA is an imaging Fizeau interferometer, for use in near infrared wavelengths, being built for the Large Binocular Telescope. Multi-conjugate adaptive optics (MCAO) increases the sky coverage and the field of view over which diffraction limited images can be obtained. For its MCAO implementation, Linc-Nirvana utilizes four total wavefront sensors; each of the two beams is corrected by both a ground-layer wavefront sensor (GWS) and a high-layer wavefront sensor (HWS). The GWS controls the adaptive secondary deformable mirror (DM), which is based on an DSP slope computing unit. Whereas the HWS controls an internal DM via computations provided by an off-the-shelf multi-core Linux system. Using wavefront sensor data collected from a prior lab experiment, we have shown via simulation that the Linux based system is sufficient to operate at 1kHz, with jitter well below the needs of the final system. Based on that setup we tested the end-to-end performance and latency through all parts of the system which includes the camera, the wavefront controller, and the deformable mirror. We will present our loop control structure and the results of those performance tests.

  15. The optical performance of the PILOT instrument from ground end-to-end tests

    NASA Astrophysics Data System (ADS)

    Misawa, R.; Bernard, J.-Ph.; Longval, Y.; Ristorcelli, I.; Ade, P.; Alina, D.; André, Y.; Aumont, J.; Bautista, L.; de Bernardis, P.; Boulade, O.; Bousqet, F.; Bouzit, M.; Buttice, V.; Caillat, A.; Chaigneau, M.; Charra, M.; Crane, B.; Douchin, F.; Doumayrou, E.; Dubois, J. P.; Engel, C.; Griffin, M.; Foenard, G.; Grabarnik, S.; Hargrave, P.; Hughes, A.; Laureijs, R.; Leriche, B.; Maestre, S.; Maffei, B.; Marty, C.; Marty, W.; Masi, S.; Montel, J.; Montier, L.; Mot, B.; Narbonne, J.; Pajot, F.; Pérot, E.; Pimentao, J.; Pisano, G.; Ponthieu, N.; Rodriguez, L.; Roudil, G.; Salatino, M.; Savini, G.; Simonella, O.; Saccoccio, M.; Tauber, J.; Tucker, C.

    2017-06-01

    The Polarized Instrument for Long-wavelength Observation of the Tenuous interstellar medium ( PILOT) is a balloon-borne astronomy experiment designed to study the linear polarization of thermal dust emission in two photometric bands centred at wavelengths 240 μm (1.2 THz) and 550 μm (545 GHz), with an angular resolution of a few arcminutes. Several end-to-end tests of the instrument were performed on the ground between 2012 and 2014, in order to prepare for the first scientific flight of the experiment that took place in September 2015 from Timmins, Ontario, Canada. This paper presents the results of those tests, focussing on an evaluation of the instrument's optical performance. We quantify image quality across the extent of the focal plane, and describe the tests that we conducted to determine the focal plane geometry, the optimal focus position, and sources of internal straylight. We present estimates of the detector response, obtained using an internal calibration source, and estimates of the background intensity and background polarization.

  16. Telecommunications end-to-end systems monitoring on TOPEX/Poseidon: Tools and techniques

    NASA Technical Reports Server (NTRS)

    Calanche, Bruno J.

    1994-01-01

    The TOPEX/Poseidon Project Satellite Performance Analysis Team's (SPAT) roles and responsibilities have grown to include functions that are typically performed by other teams on JPL Flight Projects. In particular, SPAT Telecommunication's role has expanded beyond the nominal function of monitoring, assessing, characterizing, and trending the spacecraft (S/C) RF/Telecom subsystem to one of End-to-End Information Systems (EEIS) monitoring. This has been accomplished by taking advantage of the spacecraft and ground data system structures and protocols. By processing both the received spacecraft telemetry minor frame ground generated CRC flags and NASCOM block poly error flags, bit error rates (BER) for each link segment can be determined. This provides the capability to characterize the separate link segments, determine science data recovery, and perform fault/anomaly detection and isolation. By monitoring and managing the links, TOPEX has successfully recovered approximately 99.9 percent of the science data with an integrity (BER) of better than 1 x 10(exp 8). This paper presents the algorithms used to process the above flags and the techniques used for EEIS monitoring.

  17. Development of an End-to-End Model for Free-Space Optical Communications

    NASA Astrophysics Data System (ADS)

    Hemmati, H.

    2005-05-01

    Through funding by NASA's Exploration Systems Research and Technology (ESR&T) Program and the Advanced Space Technology Program (ASTP), a team, including JPL, Boeing, NASA-Glenn, and the Georgia Institute of Technology, will develop an end-to-end modeling tool for rapid architecture trade-offs of high-data-rate laser communications from lunar, martian, and outer planetary ranges. An objective of the modeling tool is to reduce the inefficient reliance on modeling of discrete subsystems or sequential development of multiple expensive and time-consuming hardware units, thereby saving significant cost and time. This dynamic, time-domain modeling tool will accept measured component and subsystem data inputs and generate "difficult to measure" characteristics required for the performance evaluation of different designs and architectural choices. The planned modeling tool will incorporate actual subsystem performance data to reduce the develop-build-evaluate-refine production cycle. The list of high-level objectives of the program includes (1) development of a bidirectional global link analysis backbone software encompassing all optical communication subsystem parameters; (2) development of a bidirectional global link simulation model encompassing all optical communication parameters; (3) interoperability of the link analysis tool with all relevant detailed subsystem design models; and (4) a validated model that is validated against known experimental data at the subsystem and system levels.

  18. Status report of the end-to-end ASKAP software system: towards early science operations

    NASA Astrophysics Data System (ADS)

    Guzman, Juan Carlos; Chapman, Jessica; Marquarding, Malte; Whiting, Matthew

    2016-08-01

    300 MHz bandwidth for Array Release 1; followed by the deployment of the real-time data processing components. In addition to the Central Processor, the first production release of the CSIRO ASKAP Science Data Archive (CASDA) has also been deployed in one of the Pawsey Supercomputing Centre facilities and it is integrated to the end-to-end ASKAP data flow system. This paper describes the current status of the "end-to-end" data flow software system from preparing observations to data acquisition, processing and archiving; and the challenges of integrating an HPC facility as a key part of the instrument. It also shares some lessons learned since the start of integration activities and the challenges ahead in preparation for the start of the Early Science program.

  19. SPoRT - An End-to-End R2O Activity

    NASA Technical Reports Server (NTRS)

    Jedlovec, Gary J.

    2009-01-01

    Established in 2002 to demonstrate the weather and forecasting application of real-time EOS measurements, the Short-term Prediction Research and Transition (SPoRT) program has grown to be an end-to-end research to operations activity focused on the use of advanced NASA modeling and data assimilation approaches, nowcasting techniques, and unique high-resolution multispectral observational data applications from EOS satellites to improve short-term weather forecasts on a regional and local scale. SPoRT currently partners with several universities and other government agencies for access to real-time data and products, and works collaboratively with them and operational end users at 13 WFOs to develop and test the new products and capabilities in a "test-bed" mode. The test-bed simulates key aspects of the operational environment without putting constraints on the forecaster workload. Products and capabilities which show utility in the test-bed environment are then transitioned experimentally into the operational environment for further evaluation and assessment. SPoRT focuses on a suite of data and products from MODIS, AMSR-E, and AIRS on the NASA Terra and Aqua satellites, and total lightning measurements from ground-based networks. Some of the observations are assimilated into or used with various versions of the WRF model to provide supplemental forecast guidance to operational end users. SPoRT is enhancing partnerships with NOAA / NESDIS for new product development and data access to exploit the remote sensing capabilities of instruments on the NPOESS satellites to address short term weather forecasting problems. The VIIRS and CrIS instruments on the NPP and follow-on NPOESS satellites provide similar observing capabilities to the MODIS and AIRS instruments on Terra and Aqua. SPoRT will be transitioning existing and new capabilities into the AWIIPS II environment to continue the continuity of its activities.

  20. SPoRT - An End-to-End R2O Activity

    NASA Technical Reports Server (NTRS)

    Jedlovec, Gary J.

    2009-01-01

    Established in 2002 to demonstrate the weather and forecasting application of real-time EOS measurements, the Short-term Prediction Research and Transition (SPoRT) program has grown to be an end-to-end research to operations activity focused on the use of advanced NASA modeling and data assimilation approaches, nowcasting techniques, and unique high-resolution multispectral observational data applications from EOS satellites to improve short-term weather forecasts on a regional and local scale. SPoRT currently partners with several universities and other government agencies for access to real-time data and products, and works collaboratively with them and operational end users at 13 WFOs to develop and test the new products and capabilities in a "test-bed" mode. The test-bed simulates key aspects of the operational environment without putting constraints on the forecaster workload. Products and capabilities which show utility in the test-bed environment are then transitioned experimentally into the operational environment for further evaluation and assessment. SPoRT focuses on a suite of data and products from MODIS, AMSR-E, and AIRS on the NASA Terra and Aqua satellites, and total lightning measurements from ground-based networks. Some of the observations are assimilated into or used with various versions of the WRF model to provide supplemental forecast guidance to operational end users. SPoRT is enhancing partnerships with NOAA / NESDIS for new product development and data access to exploit the remote sensing capabilities of instruments on the NPOESS satellites to address short term weather forecasting problems. The VIIRS and CrIS instruments on the NPP and follow-on NPOESS satellites provide similar observing capabilities to the MODIS and AIRS instruments on Terra and Aqua. SPoRT will be transitioning existing and new capabilities into the AWIIPS II environment to continue the continuity of its activities.

  1. End-to-End Self-Assembly of RADA 16-I Nanofibrils in Aqueous Solutions

    PubMed Central

    Arosio, Paolo; Owczarz, Marta; Wu, Hua; Butté, Alessandro; Morbidelli, Massimo

    2012-01-01

    RADARADARADARADA (RADA 16-I) is a synthetic amphiphilic peptide designed to self-assemble in a controlled way into fibrils and higher ordered structures depending on pH. In this work, we use various techniques to investigate the state of the peptide dispersed in water under dilute conditions at different pH and in the presence of trifluoroacetic acid or hydrochloric acid. We have identified stable RADA 16-I fibrils at pH 2.0–4.5, which have a length of ∼200–400 nm and diameter of 10 nm. The fibrils have the characteristic antiparallel β-sheet structure of amyloid fibrils, as measured by circular dichroism and Fourier transform infrared spectrometry. During incubation at pH 2.0–4.5, the fibrils elongate very slowly via an end-to-end fibril-fibril aggregation mechanism, without changing their diameter, and the kinetics of such aggregation depends on pH and anion type. At pH 2.0, we also observed a substantial amount of monomers in the system, which do not participate in the fibril elongation and degrade to fragments. The fibril-fibril elongation kinetics has been simulated using the Smoluchowski kinetic model, population balance equations, and the simulation results are in good agreement with the experimental data. It is also found that the aggregation process is not limited by diffusion but rather is an activated process with energy barrier in the order of 20 kcal/mol. PMID:22500762

  2. SME2EM: Smart mobile end-to-end monitoring architecture for life-long diseases.

    PubMed

    Serhani, Mohamed Adel; Menshawy, Mohamed El; Benharref, Abdelghani

    2016-01-01

    Monitoring life-long diseases requires continuous measurements and recording of physical vital signs. Most of these diseases are manifested through unexpected and non-uniform occurrences and behaviors. It is impractical to keep patients in hospitals, health-care institutions, or even at home for long periods of time. Monitoring solutions based on smartphones combined with mobile sensors and wireless communication technologies are a potential candidate to support complete mobility-freedom, not only for patients, but also for physicians. However, existing monitoring architectures based on smartphones and modern communication technologies are not suitable to address some challenging issues, such as intensive and big data, resource constraints, data integration, and context awareness in an integrated framework. This manuscript provides a novel mobile-based end-to-end architecture for live monitoring and visualization of life-long diseases. The proposed architecture provides smartness features to cope with continuous monitoring, data explosion, dynamic adaptation, unlimited mobility, and constrained devices resources. The integration of the architecture׳s components provides information about diseases׳ recurrences as soon as they occur to expedite taking necessary actions, and thus prevent severe consequences. Our architecture system is formally model-checked to automatically verify its correctness against designers׳ desirable properties at design time. Its components are fully implemented as Web services with respect to the SOA architecture to be easy to deploy and integrate, and supported by Cloud infrastructure and services to allow high scalability, availability of processes and data being stored and exchanged. The architecture׳s applicability is evaluated through concrete experimental scenarios on monitoring and visualizing states of epileptic diseases. The obtained theoretical and experimental results are very promising and efficiently satisfy the proposed

  3. End-to-end self-assembly of RADA 16-I nanofibrils in aqueous solutions.

    PubMed

    Arosio, Paolo; Owczarz, Marta; Wu, Hua; Butté, Alessandro; Morbidelli, Massimo

    2012-04-04

    RADARADARADARADA (RADA 16-I) is a synthetic amphiphilic peptide designed to self-assemble in a controlled way into fibrils and higher ordered structures depending on pH. In this work, we use various techniques to investigate the state of the peptide dispersed in water under dilute conditions at different pH and in the presence of trifluoroacetic acid or hydrochloric acid. We have identified stable RADA 16-I fibrils at pH 2.0-4.5, which have a length of ∼200-400 nm and diameter of 10 nm. The fibrils have the characteristic antiparallel β-sheet structure of amyloid fibrils, as measured by circular dichroism and Fourier transform infrared spectrometry. During incubation at pH 2.0-4.5, the fibrils elongate very slowly via an end-to-end fibril-fibril aggregation mechanism, without changing their diameter, and the kinetics of such aggregation depends on pH and anion type. At pH 2.0, we also observed a substantial amount of monomers in the system, which do not participate in the fibril elongation and degrade to fragments. The fibril-fibril elongation kinetics has been simulated using the Smoluchowski kinetic model, population balance equations, and the simulation results are in good agreement with the experimental data. It is also found that the aggregation process is not limited by diffusion but rather is an activated process with energy barrier in the order of 20 kcal/mol.

  4. An optimized end-to-end process for the analysis of agile earth observation satellite missions

    NASA Astrophysics Data System (ADS)

    Hahn, M.; Müller, T.; Levenhagen, J.

    2014-12-01

    Agile earth observation satellite missions are becoming more and more important due to their capability to perform fast reorientation maneuvers with 3 degrees of freedom to capture different target areas along the orbital path, thus increasing the observed area and complexity of scans. The design of an agile earth observation satellite mission is a non-trivial task due to the fact that a trade-off between observed area and complexity of the scans on the one hand and degree of agility available and thus performance of the attitude control devices on the other hand has to be done. Additionally, the designed mission has to be evaluated in a realistic environment also taking into account the specific characteristics of the chosen actuators. In the present work, several methods are combined to provide an integrated analysis of agile earth observation satellite missions starting from the definition of a desired ground scan scenario, going via the creation of a guidance profile to a realistic simulation and ending at the verification of the feasibility by detailed closed-loop simulation. Regarding its technical implementation at Astrium GmbH, well-proven tools for the different tasks of the analysis are incorporated and well defined interfaces for those tools are specified, allowing a high degree of automatism and thus saving time and minimizing errors. This results in a complete end-to-end process for the design, analysis and verification of agile earth observation satellite missions. This process is demonstrated by means of an example analysis using control moment gyros for a high agility mission.

  5. A Mechanistic End-to-End Concussion Model That Translates Head Kinematics to Neurologic Injury

    PubMed Central

    Ng, Laurel J.; Volman, Vladislav; Gibbons, Melissa M.; Phohomsiri, Pi; Cui, Jianxia; Swenson, Darrell J.; Stuhmiller, James H.

    2017-01-01

    Past concussion studies have focused on understanding the injury processes occurring on discrete length scales (e.g., tissue-level stresses and strains, cell-level stresses and strains, or injury-induced cellular pathology). A comprehensive approach that connects all length scales and relates measurable macroscopic parameters to neurological outcomes is the first step toward rationally unraveling the complexity of this multi-scale system, for better guidance of future research. This paper describes the development of the first quantitative end-to-end (E2E) multi-scale model that links gross head motion to neurological injury by integrating fundamental elements of tissue and cellular mechanical response with axonal dysfunction. The model quantifies axonal stretch (i.e., tension) injury in the corpus callosum, with axonal functionality parameterized in terms of axonal signaling. An internal injury correlate is obtained by calculating a neurological injury measure (the average reduction in the axonal signal amplitude) over the corpus callosum. By using a neurologically based quantity rather than externally measured head kinematics, the E2E model is able to unify concussion data across a range of exposure conditions and species with greater sensitivity and specificity than correlates based on external measures. In addition, this model quantitatively links injury of the corpus callosum to observed specific neurobehavioral outcomes that reflect clinical measures of mild traumatic brain injury. This comprehensive modeling framework provides a basis for the systematic improvement and expansion of this mechanistic-based understanding, including widening the range of neurological injury estimation, improving concussion risk correlates, guiding the design of protective equipment, and setting safety standards. PMID:28663736

  6. End-To-END Performance of the Future MOMA Instrument Aboard the ExoMars Mission

    NASA Astrophysics Data System (ADS)

    Pinnick, V. T.; Buch, A.; Szopa, C.; Grand, N.; Danell, R.; Grubisic, A.; van Amerom, F. H. W.; Glavin, D. P.; Freissinet, C.; Coll, P. J.; Stalport, F.; Humeau, O.; Arevalo, R. D., Jr.; Brinckerhoff, W. B.; Steininger, H.; Goesmann, F.; Raulin, F.; Mahaffy, P. R.

    2015-12-01

    Following the SAM experiment aboard the Curiosity rover, the Mars Organic Molecule Analyzer (MOMA) experiment aboard the 2018 ExoMars mission will be the continuation of the search for organic matter on the Mars surface. One advancement with the ExoMars mission is that the sample will be extracted as deep as 2 meters below the Martian surface to minimize effects of radiation and oxidation on organic materials. To analyze the wide range of organic composition (volatile and non-volatile compounds) of the Martian soil, MOMA is equipped with a dual ion source ion trap mass spectrometer utilizing UV laser desorption / ionization (LDI) and pyrolysis gas chromatography (pyr-GC). In order to analyze refractory organic compounds and chiral molecules during GC-ITMS analysis, samples may be submitted to a derivatization process, consisting of the reaction of the sample components with specific reactants (MTBSTFA [1], DMF-DMA [2] or TMAH [3]). Previous experimental reports have focused on coupling campaigns between the breadboard versions of the GC, provided by the French team (LISA, LATMOS, CentraleSupelec), and the MS, provided by the US team (NASA-GSFC). This work focuses on the performance verification and optimization of the GC-ITMS experiment using the Engineering Test Unit (ETU) models which are representative of the form, fit and function of the flight instrument including a flight-like pyrolysis oven and tapping station providing by the German team (MPS). The results obtained demonstrate the current status of the end-to-end performance of the gas chromatography-mass spectrometry mode of operation. References: [1] Buch, A. et al. (2009) J Chrom. A, 43, 143-151. [2] Freissinet et al. (2011) J Chrom A, 1306, 59-71. [3] Geffroy-Rodier, C. et al. (2009) JAAP, 85, 454-459.

  7. Advanced End-to-end Simulation for On-board Processing (AESOP)

    NASA Technical Reports Server (NTRS)

    Mazer, Alan S.

    1994-01-01

    Developers of data compression algorithms typically use their own software together with commercial packages to implement, evaluate and demonstrate their work. While convenient for an individual developer, this approach makes it difficult to build on or use another's work without intimate knowledge of each component. When several people or groups work on different parts of the same problem, the larger view can be lost. What's needed is a simple piece of software to stand in the gap and link together the efforts of different people, enabling them to build on each other's work, and providing a base for engineers and scientists to evaluate the parts as a cohesive whole and make design decisions. AESOP (Advanced End-to-end Simulation for On-board Processing) attempts to meet this need by providing a graphical interface to a developer-selected set of algorithms, interfacing with compiled code and standalone programs, as well as procedures written in the IDL and PV-Wave command languages. As a proof of concept, AESOP is outfitted with several data compression algorithms integrating previous work on different processors (AT&T DSP32C, TI TMS320C30, SPARC). The user can specify at run-time the processor on which individual parts of the compression should run. Compressed data is then fed through simulated transmission and uncompression to evaluate the effects of compression parameters, noise and error correction algorithms. The following sections describe AESOP in detail. Section 2 describes fundamental goals for usability. Section 3 describes the implementation. Sections 4 through 5 describe how to add new functionality to the system and present the existing data compression algorithms. Sections 6 and 7 discuss portability and future work.

  8. Weaving marine food webs from end to end under global change

    NASA Astrophysics Data System (ADS)

    Moloney, Coleen L.; St John, Michael A.; Denman, Kenneth L.; Karl, David M.; Köster, Friedrich W.; Sundby, Svein; Wilson, Rory P.

    2011-02-01

    Marine food web dynamics are determined by interactions within and between species and between species and their environment. Global change directly affects abiotic conditions and living organisms, impinging on all trophic levels in food webs. Different groups of marine researchers traditionally study different aspects of these changes. However, over medium to long time scales perturbations affecting food webs need to be considered across the full range from nutrients to top predators. Studies of end-to-end marine food webs not only span organism sizes and trophic levels, but should also help align multidisciplinary research to common goals and perspectives. Topics are described that bridge disciplinary gaps and are needed to develop new understanding of the reciprocal impacts of global change on marine food webs and ocean biogeochemistry. These include (1) the effects of nutrients on biomass and production, (2) the effects of varying element ratios on food web structure and food quality, (3) bulk flows of energy and material in food webs and their efficiencies of transfer, (4) the ecological effects of species richness and the roles of microbial organisms, (5) the role of feeding behaviour in food web dynamics and trophic controls, (6) the spatial dynamics of communities and links between different food webs, (7) the combined effects of body size and behaviour in determining dynamics of food webs, and (8) the extent to which the ability of marine organisms (and communities) to adapt will influence food web dynamics. An overriding issue that influences all topics concerns the time and space scales of ecosystem variability. Threads link different nodes of information among various topics, emphasizing the importance of tackling food web studies with a variety of modelling approaches and through a combination of field and experimental studies with a strong comparative approach.

  9. In vivo laser assisted end-to-end anastomosis with ICG-infused chitosan patches

    NASA Astrophysics Data System (ADS)

    Rossi, Francesca; Matteini, Paolo; Esposito, Giuseppe; Scerrati, Alba; Albanese, Alessio; Puca, Alfredo; Maira, Giulio; Rossi, Giacomo; Pini, Roberto

    2011-07-01

    Laser assisted vascular repair is a new optimized technique based on the use of ICG-infused chitosan patch to close a vessel wound, with or even without few supporting single stitches. We present an in vivo experimental study on an innovative end-to-end laser assisted vascular anastomotic (LAVA) technique, performed with the application of ICGinfused chitosan patches. The photostability and the mechanical properties of ICG-infused chitosan films were preliminary measured. The in vivo study was performed in 10 New Zealand rabbits. After anesthesia, a 3-cm segment of the right common carotid artery was exposed, thus clamped proximally and distally. The artery was then interrupted by means of a full thickness cut. Three single microsutures were used to approximate the two vessel edges. The ICG-infused chitosan patch was rolled all over the anastomotic site and welded by the use of a diode laser emitting at 810 nm and equipped with a 300 μm diameter optical fiber. Welding was obtained by delivering single laser spots to induce local patch/tissue adhesion. The result was an immediate closure of the anastomosis, with no bleeding at clamps release. Thus animals underwent different follow-up periods, in order to evaluate the welded vessels over time. At follow-up examinations, all the anastomoses were patent and no bleeding signs were documented. Samples of welded vessels underwent histological examinations. Results showed that this technique offer several advantages over conventional suturing methods: simplification of the surgical procedure, shortening of the operative time, better re-endothelization and optimal vascular healing process.

  10. Identifying Elusive Electromagnetic Counterparts to Gravitational Wave Mergers: An End-to-end Simulation

    NASA Astrophysics Data System (ADS)

    Nissanke, Samaya; Kasliwal, Mansi; Georgieva, Alexandra

    2013-04-01

    Combined gravitational wave (GW) and electromagnetic (EM) observations of compact binary mergers should enable detailed studies of astrophysical processes in the strong-field gravity regime. This decade, ground-based GW interferometers promise to routinely detect compact binary mergers. Unfortunately, networks of GW interferometers have poor angular resolution on the sky and their EM signatures are predicted to be faint. Therefore, a challenging goal will be to unambiguously pinpoint the EM counterparts of GW mergers. We perform the first comprehensive end-to-end simulation that focuses on: (1) GW sky localization, distance measures, and volume errors with two compact binary populations and four different GW networks; (2) subsequent EM detectability by a slew of multiwavelength telescopes; and (3) final identification of the merger counterpart amidst a sea of possible astrophysical false positives. First, we find that double neutron star binary mergers can be detected out to a maximum distance of 400 Mpc (or 750 Mpc) by three (or five) detector GW networks, respectively. Neutron-star-black-hole binary mergers can be detected a factor of 1.5 further out; their median to maximum sky localizations are 50-170 deg2 (or 6-65 deg2) for a three (or five) detector GW network. Second, by optimizing depth, cadence, and sky area, we quantify relative fractions of optical counterparts that are detectable by a suite of different aperture-size telescopes across the globe. Third, we present five case studies to illustrate the diversity of scenarios in secure identification of the EM counterpart. We discuss the case of a typical binary, neither beamed nor nearby, and the challenges associated with identifying an EM counterpart at both low and high Galactic latitudes. For the first time, we demonstrate how construction of low-latency GW volumes in conjunction with local universe galaxy catalogs can help solve the problem of false positives. We conclude with strategies that would

  11. An End-to-End System to Enable Quick, Easy and Inexpensive Deployment of Hydrometeorological Stations

    NASA Astrophysics Data System (ADS)

    Celicourt, P.; Piasecki, M.

    2014-12-01

    The high cost of hydro-meteorological data acquisition, communication and publication systems along with limited qualified human resources is considered as the main reason why hydro-meteorological data collection remains a challenge especially in developing countries. Despite significant advances in sensor network technologies which gave birth to open hardware and software, low-cost (less than $50) and low-power (in the order of a few miliWatts) sensor platforms in the last two decades, sensors and sensor network deployment remains a labor-intensive, time consuming, cumbersome, and thus expensive task. These factors give rise for the need to develop a affordable, simple to deploy, scalable and self-organizing end-to-end (from sensor to publication) system suitable for deployment in such countries. The design of the envisioned system will consist of a few Sensed-And-Programmed Arduino-based sensor nodes with low-cost sensors measuring parameters relevant to hydrological processes and a Raspberry Pi micro-computer hosting the in-the-field back-end data management. This latter comprises the Python/Django model of the CUAHSI Observations Data Model (ODM) namely DjangODM backed by a PostgreSQL Database Server. We are also developing a Python-based data processing script which will be paired with the data autoloading capability of Django to populate the DjangODM database with the incoming data. To publish the data, the WOFpy (WaterOneFlow Web Services in Python) developed by the Texas Water Development Board for 'Water Data for Texas' which can produce WaterML web services from a variety of back-end database installations such as SQLite, MySQL, and PostgreSQL will be used. A step further would be the development of an appealing online visualization tool using Python statistics and analytics tools (Scipy, Numpy, Pandas) showing the spatial distribution of variables across an entire watershed as a time variant layer on top of a basemap.

  12. Astra: Interdisciplinary study on enhancement of the end-to-end accuracy for spacecraft tracking techniques

    NASA Astrophysics Data System (ADS)

    Iess, Luciano; Di Benedetto, Mauro; James, Nick; Mercolino, Mattia; Simone, Lorenzo; Tortora, Paolo

    2014-02-01

    Navigation of deep-space probes is accomplished through a variety of different radio observables, namely Doppler, ranging and Delta-Differential One-Way Ranging (Delta-DOR). The particular mix of observations used for navigation mainly depends on the available on-board radio system, the mission phase and orbit determination requirements. The accuracy of current ESA and NASA tracking systems is at level of 0.1 mm/s at 60 s integration time for Doppler, 1-5 m for ranging and 6-15 nrad for Delta-DOR measurements in a wide range of operational conditions. The ASTRA study, funded under ESA's General Studies Programme (GSP), addresses the ways to improve the end-to-end accuracy of Doppler, ranging and Delta-DOR systems by roughly a factor of 10. The target accuracies were set to 0.01 mm/s at 60 s integration time for Doppler, 20 cm for ranging and 1 nrad for Delta-DOR. The companies and universities that took part in the study were the University of Rome Sapienza, ALMASpace, BAE Systems and Thales Alenia Space Italy. The analysis of an extensive data set of radio-metric observables and dedicated tests of the ground station allowed consolidating the error budget for each measurement technique. The radio-metric data set comprises X/X, X/Ka and Ka/Ka range and Doppler observables from the Cassini and Rosetta missions. It includes also measurements from the Advanced Media Calibration System (AMCS) developed by JPL for the radio science experiments of the Cassini mission. The error budget for the three radio-metric observables was consolidated by comparing the statistical properties of the data set with the expected error models. The analysis confirmed the contribution from some error sources, but revealed also some discrepancies and ultimately led to improved error models. The error budget reassessment provides adequate information for building guidelines and strategies to effectively improve the navigation accuracies of future deep space missions. We report both on updated

  13. SU-E-T-150: End to End Tests On the First Clinical EDGETM

    SciTech Connect

    Scheib, S; Schmelzer, P; Vieira, S; Greco, C

    2014-06-01

    Purpose: To quantify the sub millimeter overall accuracy of EDGETM, the dedicated linac based SRS/SABR treatment platform from Varian, using a novel End-to-End (E2E) test phantom. Methods: The new E2E test phantom developed by Varian consists of a cube with an outer dimension of 15x15x15 cm3. The phantom is equipped with an exchangable inner cube (7×7×7 cm3) to hold radiochromic films or a tungsten ball (diameter = 5 mm) for Winston-Lutz tests. 16 ceramic balls (diameter = 5 mm) are embedded in the outer cube. Three embedded Calypso transponders allow for Calypso based monitoring. The outer surface of the phantom is tracked using the Optical Surface Monitoring System (OSMS). The phantom is positioned using kV, MV and CBCT images. A simCT of the phantom was acquired and SRS/SABR plans were treated using the new phantom on the first clinical installed EDGETM. As a first step a series of EPID based Winston-Lutz tests have been performed. As a second step the calculated dose distribution applied to the phantom was verified with radiochromic films in orthogonal planes. The measured dose distribution is compared with the calculated (Eclipse) one based on the known isocenter on both dose distributions. The geometrical shift needed to match both dose distributions is the overall accuracy and is determined using dose profiles, isodose lines or gamma pass rates (3%, 1 mm). Results: Winston-Lutz tests using the central tungsten BB demonstrated a targeting accuracy of 0.44±0.18mm for jaw (2cm × 2cm) defined 0.39±0.19mm for MLC (2cm × 2cm) defined and 0.37±0.15mm for cone (12.5 mm) defined fields. A treated patient plan (spinal metastases lesion with integrated boost) showed a dosimetric dose localization accuracy of 0.6mm. Conclusion: Geometric and dosimetric E2E tests on EDGETM, show sub-millimeter E2E targeting and dose localisation accuracy.

  14. End-To-END Performance of the future MOMA intrument aboard the EXOMARS MISSION

    NASA Astrophysics Data System (ADS)

    Buch, A.; Pinnick, V. T.; Szopa, C.; Grand, N.; Danell, R.; van Amerom, F. H. W.; Freissinet, C.; Glavin, D. P.; Stalport, F.; Arevalo, R. D., Jr.; Coll, P. J.; Steininger, H.; Raulin, F.; Goesmann, F.; Mahaffy, P. R.; Brinckerhoff, W. B.

    2016-12-01

    After the SAM experiment aboard the curiosity rover, the Mars Organic Molecule Analyzer (MOMA) experiment aboard the future ExoMars mission will be the continuation of the search for the organic composition of the Mars surface with the advantage that the sample will be extracted as deep as 2 meters below the martian surface to minimize effects of radiation and oxidation on organic materials. To analyse the wide range of organic composition (volatile and non volatils compounds) of the martian soil MOMA is composed with an UV laser desorption / ionization (LDI) and a pyrolysis gas chromatography ion trap mass spectrometry (pyr-GC-ITMS). In order to analyse refractory organic compounds and chirality samples which undergo GC-ITMS analysis may be submitted to a derivatization process, consisting of the reaction of the sample components with specific reactants (MTBSTFA [1], DMF-DMA [2] or TMAH [3]). To optimize and test the performance of the GC-ITMS instrument we have performed several coupling tests campaigns between the GC, providing by the French team (LISA, LATMOS, CentraleSupelec), and the MS, providing by the US team (NASA, GSFC). Last campaign has been done with the ITU models wich is similar to the flight model and wich include the oven and the taping station providing by the German team (MPS). The results obtained demonstrate the current status of the end-to-end performance of the gas chromatography-mass spectrometry mode of operation. References:[1] Buch, A. et al. (2009) J chrom. A, 43, 143-151. [2] Freissinet et al. (2011) J Chrom A, 1306, 59-71. [3] Geffroy-Rodier, C. et al. (2009) JAAP, 85, 454-459. Acknowledgements: Funding provided by the Mars Exploration Program (point of contact, George Tahu, NASA/HQ). MOMA is a collaboration between NASA and ESA (PI Goesmann, MPS). MOMA-GC team acknowledges support from the French Space Agency (CNES), French National Programme of Planetology (PNP), National French Council (CNRS), Pierre Simon Laplace Institute.

  15. Urban Biomining Meets Printable Electronics: End-To-End at Destination Biological Recycling and Reprinting

    NASA Technical Reports Server (NTRS)

    Rothschild, Lynn J. (Principal Investigator); Koehne, Jessica; Gandhiraman, Ram; Navarrete, Jesica; Spangle, Dylan

    2017-01-01

    Space missions rely utterly on metallic components, from the spacecraft to electronics. Yet, metals add mass, and electronics have the additional problem of a limited lifespan. Thus, current mission architectures must compensate for replacement. In space, spent electronics are discarded; on earth, there is some recycling but current processes are toxic and environmentally hazardous. Imagine instead an end-to-end recycling of spent electronics at low mass, low cost, room temperature, and in a non-toxic manner. Here, we propose a solution that will not only enhance mission success by decreasing upmass and providing a fresh supply of electronics, but in addition has immediate applications to a serious environmental issue on the Earth. Spent electronics will be used as feedstock to make fresh electronic components, a process we will accomplish with so-called 'urban biomining' using synthetically enhanced microbes to bind metals with elemental specificity. To create new electronics, the microbes will be used as 'bioink' to print a new IC chip, using plasma jet electronics printing. The plasma jet electronics printing technology will have the potential to use martian atmospheric gas to print and to tailor the electronic and chemical properties of the materials. Our preliminary results have suggested that this process also serves as a purification step to enhance the proportion of metals in the 'bioink'. The presence of electric field and plasma can ensure printing in microgravity environment while also providing material morphology and electronic structure tunabiity and thus optimization. Here we propose to increase the TRL level of the concept by engineering microbes to dissolve the siliceous matrix in the IC, extract copper from a mixture of metals, and use the microbes as feedstock to print interconnects using mars gas simulant. To assess the ability of this concept to influence mission architecture, we will do an analysis of the infrastructure required to execute

  16. IDENTIFYING ELUSIVE ELECTROMAGNETIC COUNTERPARTS TO GRAVITATIONAL WAVE MERGERS: AN END-TO-END SIMULATION

    SciTech Connect

    Nissanke, Samaya; Georgieva, Alexandra; Kasliwal, Mansi

    2013-04-20

    Combined gravitational wave (GW) and electromagnetic (EM) observations of compact binary mergers should enable detailed studies of astrophysical processes in the strong-field gravity regime. This decade, ground-based GW interferometers promise to routinely detect compact binary mergers. Unfortunately, networks of GW interferometers have poor angular resolution on the sky and their EM signatures are predicted to be faint. Therefore, a challenging goal will be to unambiguously pinpoint the EM counterparts of GW mergers. We perform the first comprehensive end-to-end simulation that focuses on: (1) GW sky localization, distance measures, and volume errors with two compact binary populations and four different GW networks; (2) subsequent EM detectability by a slew of multiwavelength telescopes; and (3) final identification of the merger counterpart amidst a sea of possible astrophysical false positives. First, we find that double neutron star binary mergers can be detected out to a maximum distance of 400 Mpc (or 750 Mpc) by three (or five) detector GW networks, respectively. Neutron-star-black-hole binary mergers can be detected a factor of 1.5 further out; their median to maximum sky localizations are 50-170 deg{sup 2} (or 6-65 deg{sup 2}) for a three (or five) detector GW network. Second, by optimizing depth, cadence, and sky area, we quantify relative fractions of optical counterparts that are detectable by a suite of different aperture-size telescopes across the globe. Third, we present five case studies to illustrate the diversity of scenarios in secure identification of the EM counterpart. We discuss the case of a typical binary, neither beamed nor nearby, and the challenges associated with identifying an EM counterpart at both low and high Galactic latitudes. For the first time, we demonstrate how construction of low-latency GW volumes in conjunction with local universe galaxy catalogs can help solve the problem of false positives. We conclude with strategies

  17. Achieving End-to-End QoS in the Next Generation Internet: Integrated Services over Differentiated Service Networks

    NASA Technical Reports Server (NTRS)

    Bai, Haowei; Atiquzzaman, Mohammed; Ivancic, William

    2001-01-01

    Currently there are two approaches to provide Quality of Service (QoS) in the next generation Internet: An early one is the Integrated Services (IntServ) with the goal of allowing end-to-end QoS to be provided to applications; the other one is the Differentiated Services (DiffServ) architecture providing QoS in the backbone. In this context, a DiffServ network may be viewed as a network element in the total end-to-end path. The objective of this paper is to investigate the possibility of providing end-to-end QoS when IntServ runs over DiffServ backbone in the next generation Internet. Our results show that the QoS requirements of IntServ applications can be successfully achieved when IntServ traffic is mapped to the DiffServ domain in next generation Internet.

  18. Achieving End-to-End QoS in the Next Generation Internet: Integrated Services Over Differentiated Service Networks

    NASA Technical Reports Server (NTRS)

    Bai, Haowei; Atiquzzaman, Mohammed; Ivancic, William

    2001-01-01

    Currently there are two approaches to provide Quality of Service (QoS) in the next generation Internet: An early one is the Integrated Services (IntServ) with the goal of allowing end-to-end QoS to be provided to applications; the other one is the Differentiated Services (DiffServ) architecture providing QoS in the backbone. In this context, a DiffServ network may be viewed as a network element in the total end-to-end path. The objective of this paper is to investigate the possibility of providing end-to-end QoS when IntServ runs over DiffServ backbone in the next generation Internet. Our results show that the QoS requirements of IntServ applications can be successfully achieved when IntServ traffic is mapped to the DiffServ domain in next generation Internet.

  19. Unidata's Vision for Providing Comprehensive and End-to-end Data Services

    NASA Astrophysics Data System (ADS)

    Ramamurthy, M. K.

    2009-05-01

    This paper presents Unidata's vision for providing comprehensive, well-integrated, and end-to-end data services for the geosciences. These include an array of functions for collecting, finding, and accessing data; data management tools for generating, cataloging, and exchanging metadata; and submitting or publishing, sharing, analyzing, visualizing, and integrating data. When this vision is realized, users no matter where they are or how they are connected to the Internetwill be able to find and access a plethora of geosciences data and use Unidata-provided tools and services both productively and creatively in their research and education. What that vision means for the Unidata community is elucidated by drawing a simple analogy. Most of users are familiar with Amazon and eBay e-commerce sites and content sharing sites like YouTube and Flickr. On the eBay marketplace, people can sell practically anything at any time and buyers can share their experience of purchasing a product or the reputation of a seller. Likewise, at Amazon, thousands of merchants sell their goods and millions of customers not only buy those goods, but provide a review or opinion of the products they buy and share their experiences as purchasers. Similarly, YouTube and Flickr are sites tailored to video- and photo-sharing, respectively, where users can upload their own content and share it with millions of other users, including family and friends. What all these sites, together with social-networking applications like MySpace and Facebook, have enabled is a sense of a virtual community in which users can search and browse products or content, comment and rate those products from anywhere, at any time, and via any Internet- enabled device like an iPhone, laptop, or a desktop computer. In essence, these enterprises have fundamentally altered people's buying modes and behavior toward purchases. Unidata believes that similar approaches, appropriately tailored to meet the needs of the scientific

  20. On the importance of risk knowledge for an end-to-end tsunami early warning system

    NASA Astrophysics Data System (ADS)

    Post, Joachim; Strunz, Günter; Riedlinger, Torsten; Mück, Matthias; Wegscheider, Stephanie; Zosseder, Kai; Steinmetz, Tilmann; Gebert, Niklas; Anwar, Herryal

    2010-05-01

    context has been worked out. The generated results contribute significantly in the fields of (1) warning decision and warning levels, (2) warning dissemination and warning message content, (3) early warning chain planning, (4) increasing response capabilities and protective systems, (5) emergency relief and (6) enhancing communities' awareness and preparedness towards tsunami threats. Additionally examples will be given on the potentials of an operational use of risk information in early warning systems as first experiences exist for the tsunami early warning center in Jakarta, Indonesia. Beside this the importance of linking national level early warning information with tsunami risk information available at the local level (e.g. linking warning message information on expected intensity with respective tsunami hazard zone maps at community level for effective evacuation) will be demonstrated through experiences gained in three pilot areas in Indonesia. The presentation seeks to provide new insights on benefits using risk information in early warning and will provide further evidence that practical use of risk information is an important and indispensable component of end-to-end early warning.

  1. SensorKit: An End-to-End Solution for Environmental Sensor Networking

    NASA Astrophysics Data System (ADS)

    Silva, F.; Graham, E.; Deschon, A.; Lam, Y.; Goldman, J.; Wroclawski, J.; Kaiser, W.; Benzel, T.

    2008-12-01

    Modern day sensor network technology has shown great promise to transform environmental data collection. However, despite the promise, these systems have remained the purview of the engineers and computer scientists who design them rather than a useful tool for the environmental scientists who need them. SensorKit is conceived of as a way to make wireless sensor networks accessible to The People: it is an advanced, powerful tool for sensor data collection that does not require advanced technological know-how. We are aiming to make wireless sensor networks for environmental science as simple as setting up a standard home computer network by providing simple, tested configurations of commercially-available hardware, free and easy-to-use software, and step-by-step tutorials. We designed and built SensorKit using a simplicity-through-sophistication approach, supplying users a powerful sensor to database end-to-end system with a simple and intuitive user interface. Our objective in building SensorKit was to make the prospect of using environmental sensor networks as simple as possible. We built SensorKit from off the shelf hardware components, using the Compact RIO platform from National Instruments for data acquisition due to its modular architecture and flexibility to support a large number of sensor types. In SensorKit, we support various types of analog, digital and networked sensors. Our modular software architecture allows us to abstract sensor details and provide users a common way to acquire data and to command different types of sensors. SensorKit is built on top of the Sensor Processing and Acquisition Network (SPAN), a modular framework for acquiring data in the field, moving it reliably to the scientist institution, and storing it in an easily-accessible database. SPAN allows real-time access to the data in the field by providing various options for long haul communication, such as cellular and satellite links. Our system also features reliable data storage

  2. Common Patterns with End-to-end Interoperability for Data Access

    NASA Astrophysics Data System (ADS)

    Gallagher, J.; Potter, N.; Jones, M. B.

    2010-12-01

    At first glance, using common storage formats and open standards should be enough to ensure interoperability between data servers and client applications, but that is often not the case. In the REAP (Realtime Environment for Analytical Processing; NSF #0619060) project we integrated access to data from OPeNDAP servers into the Kepler workflow system and found that, as in previous cases, we spent the bulk of our effort addressing the twin issues of data model compatibility and integration strategies. Implementing seamless data access between a remote data source and a client application (data sink) can be broken down into two kinds of issues. First, the solution must address any differences in the data models used by the data source (OPeNDAP) and the data sink (the Kepler workflow system). If these models match completely, there is little work to be done. However, that is rarely the case. To map OPeNDAP's data model to Kepler's, we used two techniques (ignoring trivial conversions): On-the-fly type mapping and out-of-band communication. Type conversion takes place both for data and metadata because Kepler requires a priori knowledge of some aspects (e.g., syntactic metadata) of the data to build a workflow. In addition, OPeNDAP's constraint expression syntax was used to send out-of-band information to restrict the data requested from the server, facilitating changes in the returned data's type. This technique provides a way for users to exert fine-grained control over the data request, a potentially useful technique, at the cost of requiring that users understand a little about the data source's processing capabilities. The second set of issues for end-to-end data access are integration strategies. OPeNDAP provides several different tools for bringing data into an application: C++, C and Java libraries that provide functions for newly written software; The netCDF library which enables existing applications to read from servers using an older interface; and simple

  3. Dynamic Hop Service Differentiation Model for End-to-End QoS Provisioning in Multi-Hop Wireless Networks

    NASA Astrophysics Data System (ADS)

    Youn, Joo-Sang; Seok, Seung-Joon; Kang, Chul-Hee

    This paper presents a new QoS model for end-to-end service provisioning in multi-hop wireless networks. In legacy IEEE 802.11e based multi-hop wireless networks, the fixed assignment of service classes according to flow's priority at every node causes priority inversion problem when performing end-to-end service differentiation. Thus, this paper proposes a new QoS provisioning model called Dynamic Hop Service Differentiation (DHSD) to alleviate the problem and support effective service differentiation between end-to-end nodes. Many previous works for QoS model through the 802.11e based service differentiation focus on packet scheduling on several service queues with different service rate and service priority. Our model, however, concentrates on a dynamic class selection scheme, called Per Hop Class Assignment (PHCA), in the node's MAC layer, which selects a proper service class for each packet, in accordance with queue states and service requirement, in every node along the end-to-end route of the packet. The proposed QoS solution is evaluated using the OPNET simulator. The simulation results show that the proposed model outperforms both best-effort and 802.11e based strict priority service models in mobile ad hoc environments.

  4. Integration proposal through standard-based design of an end-to-end platform for p-Health environments.

    PubMed

    Martíínez, I; Trigo, J D; Martínez-Espronceda, M; Escayola, J; Muñoz, P; Serrano, L; García, J

    2009-01-01

    Interoperability among medical devices and compute engines in the personal environment of the patient, and with healthcare information systems in the remote monitoring and management process is a key need that requires developments supported on standard-based design. Even though there have been some international initiatives to combine different standards, the vision of an entire end-to-end standard-based system is the next challenge. This paper presents the implementation guidelines of a ubiquitous platform for Personal Health (p-Health). It is standard-based using the two main medical norms in this context: ISO/IEEE11073 in the patient environment for medical device interoperability, and EN13606 to allow the interoperable communication of the Electronic Healthcare Record of the patient. Furthermore, the proposal of a new protocol for End-to-End Standard Harmonization (E2ESHP) is presented in order to make possible the end-to-end standard integration. The platform has been designed to comply with the last ISO/IEEE11073 and EN13606 available versions, and tested in a laboratory environment as a proof-of-concept to illustrate its feasibility as an end-to-end standard-based solution.

  5. A vision for end-to-end data services to foster international partnerships through data sharing

    NASA Astrophysics Data System (ADS)

    Ramamurthy, M.; Yoksas, T.

    2009-04-01

    Increasingly, the conduct of science requires scientific partnerships and sharing of knowledge, information, and other assets. This is particularly true in our field where the highly-coupled Earth system and its many linkages have heightened the importance of collaborations across geographic, disciplinary, and organizational boundaries. The climate system, for example, is far too complex a puzzle to be unraveled by individual investigators or nations. As articulated in the NSF Strategic Plan: FY 2006-2011, "…discovery increasingly requires expertise of individuals from different disciplines, with diverse perspectives, and often from different nations, working together to accommodate the extraordinary complexity of today's science and engineering challenges." The Nobel Prize winning IPCC assessments are a prime example of such an effort. Earth science education is also uniquely suited to drawing connections between the dynamic Earth system and societal issues. Events like the 2004 Indian Ocean tsunami and Hurricane Katrina provide ample evidence of this relevance, as they underscore the importance of timely and interdisciplinary integration and synthesis of data. Our success in addressing such complex problems and advancing geosciences depends on the availability of a state-of-the-art and robust cyberinfrastructure, transparent and timely access to high-quality data from diverse sources, and requisite tools to integrate and use the data effectively, toward creating new knowledge. To that end, Unidata's vision calls for providing comprehensive, well-integrated, and end-to-end data services for the geosciences. These include an array of functions for collecting, finding, and accessing data; data management tools for generating, cataloging, and exchanging metadata; and submitting or publishing, sharing, analyzing, visualizing, and integrating data. When this vision is realized, users — no matter where they are, how they are connected to the Internet, or what

  6. A high resolution spectrum reconstruction algorithm using compressive sensing theory

    NASA Astrophysics Data System (ADS)

    Zheng, Zhaoyu; Liang, Dakai; Liu, Shulin; Feng, Shuqing

    2015-07-01

    This paper proposes a quick spectrum scanning and reconstruction method using compressive sensing in composite structure. The strain field of corrugated structure is simulated by finite element analysis. Then the reflect spectrum is calculated using an improved transfer matrix algorithm. The K-means singular value decomposition sparse dictionary is trained . In the test the spectrum with limited sample points can be obtained and the high resolution spectrum is reconstructed by solving sparse representation equation. Compared with the other conventional basis, the effect of this method is better. The match rate of the recovered spectrum and the original spectrum is over 95%.

  7. End-to-end average BER analysis for multihop free-space optical communications with pointing errors

    NASA Astrophysics Data System (ADS)

    Sheng, Ming; Jiang, Peng; Hu, Qingsong; Su, Qin; Xie, Xiu-xiu

    2013-05-01

    This paper addresses the end-to-end average BER (ABER) performance of decode-and-forward (DF) relay free-space optical (FSO) communications over weak and strong turbulence channels with pointing errors. For the weak and strong turbulence channels, the probability distribution function (PDF) of the irradiance can be modeled by a lognormal and Gamma-Gamma distribution, respectively. Considering the effects from atmospheric attenuation, turbulence and pointing errors, we present a statistical model for the optical intensity fluctuation at the receiver. Then the end-to-end ABER performances are analyzed and derived closed-form expressions are obtained. The simulation results indicate that the derived closed-form expressions provide sufficiently accurate approximations.

  8. End-to-End Demonstrator of the Safe Affordable Fission Engine (SAFE) 30: Power Conversion and Ion Engine Operation

    NASA Technical Reports Server (NTRS)

    Hrbud, Ivana; VanDyke, Melissa; Houts, Mike; Goodfellow, Keith; Schafer, Charles (Technical Monitor)

    2001-01-01

    The Safe Affordable Fission Engine (SAFE) test series addresses Phase 1 Space Fission Systems issues in particular non-nuclear testing and system integration issues leading to the testing and non-nuclear demonstration of a 400-kW fully integrated flight unit. The first part of the SAFE 30 test series demonstrated operation of the simulated nuclear core and heat pipe system. Experimental data acquired in a number of different test scenarios will validate existing computational models, demonstrated system flexibility (fast start-ups, multiple start-ups/shut downs), simulate predictable failure modes and operating environments. The objective of the second part is to demonstrate an integrated propulsion system consisting of a core, conversion system and a thruster where the system converts thermal heat into jet power. This end-to-end system demonstration sets a precedent for ground testing of nuclear electric propulsion systems. The paper describes the SAFE 30 end-to-end system demonstration and its subsystems.

  9. Exploring the requirements for multimodal interaction for mobile devices in an end-to-end journey context.

    PubMed

    Krehl, Claudia; Sharples, Sarah

    2012-01-01

    The paper investigates the requirements for multimodal interaction on mobile devices in an end-to-end journey context. Traditional interfaces are deemed cumbersome and inefficient for exchanging information with the user. Multimodal interaction provides a different user-centred approach allowing for more natural and intuitive interaction between humans and computers. It is especially suitable for mobile interaction as it can overcome additional constraints including small screens, awkward keypads, and continuously changing settings - an inherent property of mobility. This paper is based on end-to-end journeys where users encounter several contexts during their journeys. Interviews and focus groups explore the requirements for multimodal interaction design for mobile devices by examining journey stages and identifying the users' information needs and sources. Findings suggest that multimodal communication is crucial when users multitask. Choosing suitable modalities depend on user context, characteristics and tasks.

  10. POST2 End-To-End Descent and Landing Simulation for the Autonomous Landing and Hazard Avoidance Technology Project

    NASA Technical Reports Server (NTRS)

    Fisher, Jody l.; Striepe, Scott A.

    2007-01-01

    The Program to Optimize Simulated Trajectories II (POST2) is used as a basis for an end-to-end descent and landing trajectory simulation that is essential in determining the design and performance capability of lunar descent and landing system models and lunar environment models for the Autonomous Landing and Hazard Avoidance Technology (ALHAT) project. This POST2-based ALHAT simulation provides descent and landing simulation capability by integrating lunar environment and lander system models (including terrain, sensor, guidance, navigation, and control models), along with the data necessary to design and operate a landing system for robotic, human, and cargo lunar-landing success. This paper presents the current and planned development and model validation of the POST2-based end-to-end trajectory simulation used for the testing, performance and evaluation of ALHAT project system and models.

  11. Minimizing End-to-End Interference in I/O Stacks Spanning Shared Multi-Level Buffer Caches

    ERIC Educational Resources Information Center

    Patrick, Christina M.

    2011-01-01

    This thesis presents an end-to-end interference minimizing uniquely designed high performance I/O stack that spans multi-level shared buffer cache hierarchies accessing shared I/O servers to deliver a seamless high performance I/O stack. In this thesis, I show that I can build a superior I/O stack which minimizes the inter-application interference…

  12. Minimizing End-to-End Interference in I/O Stacks Spanning Shared Multi-Level Buffer Caches

    ERIC Educational Resources Information Center

    Patrick, Christina M.

    2011-01-01

    This thesis presents an end-to-end interference minimizing uniquely designed high performance I/O stack that spans multi-level shared buffer cache hierarchies accessing shared I/O servers to deliver a seamless high performance I/O stack. In this thesis, I show that I can build a superior I/O stack which minimizes the inter-application interference…

  13. Integrated End-to -End Radar Signal & Data Processing With Over-arching Knowledge-Based Control

    DTIC Science & Technology

    2006-09-01

    perform better if it knew where potential jammers were located and their characteristics. Capraro, G.T. (2006) Integrated End-to-End Radar Signal...this system by using fiber optic or wire links on board the platform. Radio frequency (RF) links using Bluetooth or 802.11 technologies can be...the mission. During flight, the KBC will receive information about weather, jammer locations, requests for information, discrete locations, fusion

  14. Sequence and Temperature Dependence of the End-to-End Collision Dynamics of Single-Stranded DNA

    PubMed Central

    Uzawa, Takanori; Isoshima, Takashi; Ito, Yoshihiro; Ishimori, Koichiro; Makarov, Dmitrii E.; Plaxco, Kevin W.

    2013-01-01

    Intramolecular collision dynamics play an essential role in biomolecular folding and function and, increasingly, in the performance of biomimetic technologies. To date, however, the quantitative studies of dynamics of single-stranded nucleic acids have been limited. Thus motivated, here we investigate the sequence composition, chain-length, viscosity, and temperature dependencies of the end-to-end collision dynamics of single-stranded DNAs. We find that both the absolute collision rate and the temperature dependencies of these dynamics are base-composition dependent, suggesting that base stacking interactions are a significant contributor. For example, whereas the end-to-end collision dynamics of poly-thymine exhibit simple, linear Arrhenius behavior, the behavior of longer poly-adenine constructs is more complicated. Specifically, 20- and 25-adenine constructs exhibit biphasic temperature dependencies, with their temperature dependences becoming effectively indistinguishable from that of poly-thymine above 335 K for 20-adenines and 328 K for 25-adenines. The differing Arrhenius behaviors of poly-thymine and poly-adenine and the chain-length dependence of the temperature at which poly-adenine crosses over to behave like poly-thymine can be explained by a barrier friction mechanism in which, at low temperatures, the energy barrier for the local rearrangement of poly-adenine becomes the dominant contributor to its end-to-end collision dynamics. PMID:23746521

  15. Treatment of distal splenic artery aneurysm by laparoscopic aneurysmectomy with end-to-end anastomosis: A case report.

    PubMed

    Zhang, Yuhua; Liu, Zhenjie; Shen, Guoliang; Zhang, Jungang; Assa, Carmel Rebecca; Hong, Defei

    2017-05-01

    Splenic artery aneurysm (SAA) is the most common visceral artery aneurysm, while most SAAs are treated by endovascular or open procedures. Here we present a case of SAA treated by laparoscopic aneurysmectomy with end-to-end anastomosis. A 40-year-old woman was incidentally found to have an asymptomatic distal SAA. CT scan revealed the SAA to be located at the hilum of the spleen, with a maximal diameter of 2.7 cm. To prevent sudden rupture, the patient received laparoscopic aneurysmectomy. During the operation, end-to-end anastomosis was also performed since a tortuous proximal splenic artery prevented delivery of the stent graft. The patient was ambulated 12 hours after surgery and discharged 5 days later. Postoperative recovery was smooth without hemorrhage, infarction, infection, or splenic artery thrombosis. At 10-month follow-up,no hemorrhage, aneurysm recurrence, spleen infarction, splenic artery stenosis, or thrombosis had occurred. Patients with distal SAA can be treated by laparoscopic aneurysmectomy with end-to-end anastomosis to preserve the spleen. The laparoscopic procedure is safe and feasible in the selected patients.

  16. Debris mitigation measures by satellite design and operational methods - Findings from the DLR space debris End-to-End Service

    NASA Astrophysics Data System (ADS)

    Sdunnus, H.; Beltrami, P.; Janovsky, R.; Koppenwallner, G.; Krag, H.; Reimerdes, H.; Schäfer, F.

    Debris Mitigation has been recognised as an issue to be addressed by the space faring nations around the world. Currently, there are various activities going on, aiming at the establishment of debris mitigation guidelines on various levels, reaching from the UN down to national space agencies. Though guidelines established on the national level already provide concrete information how things should be done (rather that specifying what should be done or providing fundamental principles) potential users of the guidelines will still have the need to explore the technical, management, and financial implications of the guidelines for their projects. Those questions are addressed by the so called "Space Debris End-to-End Service" project, which has been initiated as a national initiative of the German Aerospace Centre (DLR). Based on a review of already existing mitigation guidelines or guidelines under development and following an identification of needs from a circle of industrial users the "End-to-End Service Gu idelines" have been established for designer and operators of spacecraft. The End-to-End Service Guidelines are based on requirements addressed by the mitigation guidelines and provide recommendations how and when the technical consideration of the mitigation guidelines should take place. By referencing requirements from the mitigation guidelines, the End-to-End Service Guidelines address the consideration of debris mitigation measures by spacecraft design and operational measures. This paper will give an introduction to the End-to-End Service Guidelines. It will focus on the proposals made for mitigation measures by the S/C system design, i.e. on protective design measures inside the spacecraft and on design measures, e.g. innovative protective (shielding) systems. Furthermore, approaches on the analytical optimisation of protective systems will be presented, aiming at the minimisation of shield mass under conservation of the protective effects. On the

  17. Spread Spectrum Visual Sensor Network Resource Management Using an End-to-End Cross-Layer Design

    DTIC Science & Technology

    2011-02-01

    APPROVED FOR PUBLIC RELEASE; DISTRIBUTION UNLIMITED. PA Case Number: WPAFB-08- 3693 DATE CLEARED: 11 JUNE 2008 13. SUPPLEMENTARY NOTES © 2011 IEEE...Elizabeth S. Bentley, Lisimachos P. Kondi, Member, IEEE, John D . Matyjas, Michael J. Medley, Senior Member, IEEE, and Bruce W. Suter Abstract—In this...was Dr. Qian Zhang. E. S. Bentley, J. D . Matyjas, M. J. Medley, and B. W. Suter are with the Air Force Research Laboratory, Rome, NY 13441 USA. L. P

  18. End-to-End Study of the Transfer of Energy from Magnetosheath Ion Precipitation to the Cusp

    NASA Technical Reports Server (NTRS)

    Coffey, V. N.; Chandler, M. O.; Singh, Nagendra; Avanov, Levon

    2005-01-01

    This paper describes a study of the effects of unstable magnetosheath distributions on the cusp ionosphere. An end-to-end numerical model was used to study, first, the evolved distributions from precipitation due to reconnection and, secondly, the energy transfer into the high latitude ionosphere based on these solar wind/magnetosheath inputs. Using inputs of several representative examples of magnetosheath injections, waves were generated at the lower hybrid frequency and energy transferred to the ionospheric electrons and ions. The resulting wave spectra and ion and electron particle heating was analyzed. Keywords: Ion heating: Magnetosheath/Ionosphere coupling: Particle/Wave Interactions. Simulations

  19. An end-to-end system to identify temporal relation in discharge summaries: 2012 i2b2 challenge

    PubMed Central

    Xu, Yan; Wang, Yining; Liu, Tianren; Tsujii, Junichi; Chang, Eric I-Chao

    2013-01-01

    Objective To create an end-to-end system to identify temporal relation in discharge summaries for the 2012 i2b2 challenge. The challenge includes event extraction, timex extraction, and temporal relation identification. Design An end-to-end temporal relation system was developed. It includes three subsystems: an event extraction system (conditional random fields (CRF) name entity extraction and their corresponding attribute classifiers), a temporal extraction system (CRF name entity extraction, their corresponding attribute classifiers, and context-free grammar based normalization system), and a temporal relation system (10 multi-support vector machine (SVM) classifiers and a Markov logic networks inference system) using labeled sequential pattern mining, syntactic structures based on parse trees, and results from a coordination classifier. Micro-averaged precision (P), recall (R), averaged P&R (P&R), and F measure (F) were used to evaluate results. Results For event extraction, the system achieved 0.9415 (P), 0.8930 (R), 0.9166 (P&R), and 0.9166 (F). The accuracies of their type, polarity, and modality were 0.8574, 0.8585, and 0.8560, respectively. For timex extraction, the system achieved 0.8818, 0.9489, 0.9141, and 0.9141, respectively. The accuracies of their type, value, and modifier were 0.8929, 0.7170, and 0.8907, respectively. For temporal relation, the system achieved 0.6589, 0.7129, 0.6767, and 0.6849, respectively. For end-to-end temporal relation, it achieved 0.5904, 0.5944, 0.5921, and 0.5924, respectively. With the F measure used for evaluation, we were ranked first out of 14 competing teams (event extraction), first out of 14 teams (timex extraction), third out of 12 teams (temporal relation), and second out of seven teams (end-to-end temporal relation). Conclusions The system achieved encouraging results, demonstrating the feasibility of the tasks defined by the i2b2 organizers. The experiment result demonstrates that both global and local

  20. The Kepler End-to-End Model: Creating High-Fidelity Simulations to Test Kepler Ground Processing

    NASA Technical Reports Server (NTRS)

    Bryson, Stephen T.; Jenkins, Jon M.; Peters, Dan J.; Tenenbaum, Peter P.; Klaus, Todd C.; Gunter, Jay P.; Cote, Miles T.; Caldwell, Douglas A.

    2010-01-01

    The Kepler mission is designed to detect the transit of Earth-like planets around Sun-like stars by observing 100,000 stellar targets. Developing and testing the Kepler ground-segment processing system, in particular the data analysis pipeline, requires high-fidelity simulated data. This simulated data is provided by the Kepler End-to-End Model (ETEM). ETEM simulates the astrophysics of planetary transits and other phenomena, properties of the Kepler spacecraft and the format of the downlinked data. Major challenges addressed by ETEM include the rapid production of large amounts of simulated data, extensibility and maintainability.

  1. End-to-End Study of the Transfer of Energy from Magnetosheath Ion Precipitation to the Cusp

    NASA Technical Reports Server (NTRS)

    Coffey, V. N.; Chandler, M. O.; Singh, Nagendra; Avanov, Levon

    2005-01-01

    This paper describes a study of the effects of unstable magnetosheath distributions on the cusp ionosphere. An end-to-end numerical model was used to study, first, the evolved distributions from precipitation due to reconnection and, secondly, the energy transfer into the high latitude ionosphere based on these solar wind/magnetosheath inputs. Using inputs of several representative examples of magnetosheath injections, waves were generated at the lower hybrid frequency and energy transferred to the ionospheric electrons and ions. The resulting wave spectra and ion and electron particle heating was analyzed. Keywords: Ion heating: Magnetosheath/Ionosphere coupling: Particle/Wave Interactions. Simulations

  2. JADS JT&E: Phase 3 and Phase 4 Verification and Validation Report for the End-to-End Test

    DTIC Science & Technology

    1999-03-01

    Plan for the ETE Test and the Phase 3 Verification and Validation Plan for the End-to-End Test 1.2 Verification and Validation Tasks The V&V tasks...performed on 23 Ferumary and 13 March 1999 during Phase 3 were conducted on the T3 aircraft parked on the ramp and are described in the Phase 3 Verification...properly was to perform an abbreviated version of the Phase 3 V&V. There were also two V&V tasks that were either not completed or were not resolved when

  3. Automated Design of Propellant-Optimal, End-to-End, Low-Thrust Trajectories for Trojan Asteroid Tours

    NASA Technical Reports Server (NTRS)

    Stuart, Jeffrey; Howell, Kathleen; Wilson, Roby

    2013-01-01

    The Sun-Jupiter Trojan asteroids are celestial bodies of great scientific interest as well as potential resources offering water and other mineral resources for longterm human exploration of the solar system. Previous investigations under this project have addressed the automated design of tours within the asteroid swarm. This investigation expands the current automation scheme by incorporating options for a complete trajectory design approach to the Trojan asteroids. Computational aspects of the design procedure are automated such that end-to-end trajectories are generated with a minimum of human interaction after key elements and constraints associated with a proposed mission concept are specified.

  4. End-to-end testing. [to verify electrical equipment failure due to carbon fibers released in aircraft-fuel fires

    NASA Technical Reports Server (NTRS)

    Pride, R. A.

    1979-01-01

    The principle objective of the kinds of demonstration tests that are discussed is to try to verify whether or not carbon fibers that are released by burning composite parts in an aircraft-fuel fires can produce failures in electrical equipment. A secondary objective discussed is to experimentally validate the analytical models for some of the key elements in the risk analysis. The approach to this demonstration testing is twofold: limited end-to-end test are to be conducted in a shock tube; and planning for some large outdoor burn tests is being done.

  5. Influence of DBT reconstruction algorithm on power law spectrum coefficient

    NASA Astrophysics Data System (ADS)

    Vancamberg, Laurence; Carton, Ann-Katherine; Abderrahmane, Ilyes H.; Palma, Giovanni; Milioni de Carvalho, Pablo; Iordache, Rǎzvan; Muller, Serge

    2015-03-01

    In breast X-ray images, texture has been characterized by a noise power spectrum (NPS) that has an inverse power-law shape described by its slope β in the log-log domain. It has been suggested that the magnitude of the power-law spectrum coefficient β is related to mass lesion detection performance. We assessed β in reconstructed digital breast tomosynthesis (DBT) images to evaluate its sensitivity to different typical reconstruction algorithms including simple back projection (SBP), filtered back projection (FBP) and a simultaneous iterative reconstruction algorithm (SIRT 30 iterations). Results were further compared to the β coefficient estimated from 2D central DBT projections. The calculations were performed on 31 unilateral clinical DBT data sets and simulated DBT images from 31 anthropomorphic software breast phantoms. Our results show that β highly depends on the reconstruction algorithm; the highest β values were found for SBP, followed by reconstruction with FBP, while the lowest β values were found for SIRT. In contrast to previous studies, we found that β is not always lower in reconstructed DBT slices, compared to 2D projections and this depends on the reconstruction algorithm. All β values estimated in DBT slices reconstructed with SBP were larger than β values from 2D central projections. Our study also shows that the reconstruction algorithm affects the symmetry of the breast texture NPS; the NPS of clinical cases reconstructed with SBP exhibit the highest symmetry, while the NPS of cases reconstructed with SIRT exhibit the highest asymmetry.

  6. Context-driven, prescription-based personal activity classification: methodology, architecture, and end-to-end implementation.

    PubMed

    Xu, James Y; Chang, Hua-I; Chien, Chieh; Kaiser, William J; Pottie, Gregory J

    2014-05-01

    Enabling large-scale monitoring and classification of a range of motion activities is of primary importance due to the need by healthcare and fitness professionals to monitor exercises for quality and compliance. Past work has not fully addressed the unique challenges that arise from scaling. This paper presents a novel end-to-end system solution to some of these challenges. The system is built on the prescription-based context-driven activity classification methodology. First, we show that by refining the definition of context, and introducing the concept of scenarios, a prescription model can provide personalized activity monitoring. Second, through a flexible architecture constructed from interface models, we demonstrate the concept of a context-driven classifier. Context classification is achieved through a classification committee approach, and activity classification follows by means of context specific activity models. Then, the architecture is implemented in an end-to-end system featuring an Android application running on a mobile device, and a number of classifiers as core classification components. Finally, we use a series of experimental field evaluations to confirm the expected benefits of the proposed system in terms of classification accuracy, rate, and sensor operating life.

  7. Far-Infrared Therapy Promotes Nerve Repair following End-to-End Neurorrhaphy in Rat Models of Sciatic Nerve Injury

    PubMed Central

    Chen, Tai-Yuan; Yang, Yi-Chin; Sha, Ya-Na; Chou, Jiun-Rou

    2015-01-01

    This study employed a rat model of sciatic nerve injury to investigate the effects of postoperative low-power far-infrared (FIR) radiation therapy on nerve repair following end-to-end neurorrhaphy. The rat models were divided into the following 3 groups: (1) nerve injury without FIR biostimulation (NI/sham group); (2) nerve injury with FIR biostimulation (NI/FIR group); and (3) noninjured controls (normal group). Walking-track analysis results showed that the NI/FIR group exhibited significantly higher sciatic functional indices at 8 weeks after surgery (P < 0.05) compared with the NI/sham group. The decreased expression of CD4 and CD8 in the NI/FIR group indicated that FIR irradiation modulated the inflammatory process during recovery. Compared with the NI/sham group, the NI/FIR group exhibited a significant reduction in muscle atrophy (P < 0.05). Furthermore, histomorphometric assessment indicated that the nerves regenerated more rapidly in the NI/FIR group than in the NI/sham group; furthermore, the NI/FIR group regenerated neural tissue over a larger area, as well as nerve fibers of greater diameter and with thicker myelin sheaths. Functional recovery, inflammatory response, muscular reinnervation, and histomorphometric assessment all indicated that FIR radiation therapy can accelerate nerve repair following end-to-end neurorrhaphy of the sciatic nerve. PMID:25722734

  8. Effect of swirling flow on platelet concentration distribution in small-caliber artificial grafts and end-to-end anastomoses

    NASA Astrophysics Data System (ADS)

    Zhan, Fan; Fan, Yu-Bo; Deng, Xiao-Yan

    2011-10-01

    Platelet concentration near the blood vessel wall is one of the major factors in the adhesion of platelets to the wall. In our previous studies, it was found that swirling flows could suppress platelet adhesion in small-caliber artificial grafts and end-to-end anastomoses. In order to better understand the beneficial effect of the swirling flow, we numerically analyzed the near-wall concentration distribution of platelets in a straight tube and a sudden tubular expansion tube under both swirling flow and normal flow conditions. The numerical models were created based on our previous experimental studies. The simulation results revealed that when compared with the normal flow, the swirling flow could significantly reduce the near-wall concentration of platelets in both the straight tube and the expansion tube. The present numerical study therefore indicates that the reduction in platelet adhesion under swirling flow conditions in small-caliber arterial grafts, or in end-to-end anastomoses as observed in our previous experimental study, was possibly through a mechanism of platelet transport, in which the swirling flow reduced the near-wall concentration of platelets.

  9. End-to-end self-assembly of gold nanorods in isopropanol solution: experimental and theoretical studies

    NASA Astrophysics Data System (ADS)

    Gordel, M.; Piela, K.; Kołkowski, R.; Koźlecki, T.; Buckle, M.; Samoć, M.

    2015-12-01

    We describe here a modification of properties of colloidal gold nanorods (NRs) resulting from the chemical treatment used to carry out their transfer into isopropanol (IPA) solution. The NRs acquire a tendency to attach one to another by their ends (end-to-end assembly). We focus on the investigation of the change in position and shape of the longitudinal surface plasmon (l-SPR) band after self-assembly. The experimental results are supported by a theoretical calculation, which rationalizes the dramatic change in optical properties when the NRs are positioned end-to-end at short distances. The detailed spectroscopic characterization performed at the consecutive stages of transfer of the NRs from water into IPA solution revealed the features of the interaction between the polymers used as ligands and their contribution to the final stage, when the NRs were dispersed in IPA solution. The efficient method of aligning the NRs detailed here may facilitate applications of the self-assembled NRs as building blocks for optical materials and biological sensing.

  10. Image gathering, coding, and processing: End-to-end optimization for efficient and robust acquisition of visual information

    NASA Technical Reports Server (NTRS)

    Huck, Friedrich O.; Fales, Carl L.

    1990-01-01

    Researchers are concerned with the end-to-end performance of image gathering, coding, and processing. The applications range from high-resolution television to vision-based robotics, wherever the resolution, efficiency and robustness of visual information acquisition and processing are critical. For the presentation at this workshop, it is convenient to divide research activities into the following two overlapping areas: The first is the development of focal-plane processing techniques and technology to effectively combine image gathering with coding, with an emphasis on low-level vision processing akin to the retinal processing in human vision. The approach includes the familiar Laplacian pyramid, the new intensity-dependent spatial summation, and parallel sensing/processing networks. Three-dimensional image gathering is attained by combining laser ranging with sensor-array imaging. The second is the rigorous extension of information theory and optimal filtering to visual information acquisition and processing. The goal is to provide a comprehensive methodology for quantitatively assessing the end-to-end performance of image gathering, coding, and processing.

  11. Performances of the fractal iterative method with an internal model control law on the ESO end-to-end ELT adaptive optics simulator

    NASA Astrophysics Data System (ADS)

    Béchet, C.; Le Louarn, M.; Tallon, M.; Thiébaut, É.

    2008-07-01

    Adaptive Optics systems under study for the Extremely Large Telescopes gave rise to a new generation of algorithms for both wavefront reconstruction and the control law. In the first place, the large number of controlled actuators impose the use of computationally efficient methods. Secondly, the performance criterion is no longer solely based on nulling residual measurements. Priors on turbulence must be inserted. In order to satisfy these two requirements, we suggested to associate the Fractal Iterative Method for the estimation step with an Internal Model Control. This combination has now been tested on an end-to-end adaptive optics numerical simulator at ESO, named Octopus. Results are presented here and performance of our method is compared to the classical Matrix-Vector Multiplication combined with a pure integrator. In the light of a theoretical analysis of our control algorithm, we investigate the influence of several errors contributions on our simulations. The reconstruction error varies with the signal-to-noise ratio but is limited by the use of priors. The ratio between the system loop delay and the wavefront coherence time also impacts on the reachable Strehl ratio. Whereas no instabilities are observed, correction quality is obviously affected at low flux, when subapertures extinctions are frequent. Last but not least, the simulations have demonstrated the robustness of the method with respect to sensor modeling errors and actuators misalignments.

  12. Model selection applied to reconstruction of the Primordial Power Spectrum

    NASA Astrophysics Data System (ADS)

    Vázquez, J. Alberto; Bridges, M.; Hobson, M. P.; Lasenby, A. N.

    2012-06-01

    The preferred shape for the primordial spectrum of curvature perturbations is determined by performing a Bayesian model selection analysis of cosmological observations. We first reconstruct the spectrum modelled as piecewise linear in log k between nodes in k-space whose amplitudes and positions are allowed to vary. The number of nodes together with their positions are chosen by the Bayesian evidence, so that we can both determine the complexity supported by the data and locate any features present in the spectrum. In addition to the node-based reconstruction, we consider a set of parameterised models for the primordial spectrum: the standard power-law parameterisation, the spectrum produced from the Lasenby & Doran (LD) model and a simple variant parameterisation. By comparing the Bayesian evidence for different classes of spectra, we find the power-law parameterisation is significantly disfavoured by current cosmological observations, which show a preference for the LD model.

  13. End-To-End Risk Assesment: From Genes and Protein to Acceptable Radiation Risks for Mars Exploration

    NASA Technical Reports Server (NTRS)

    Cucinotta, Francis A.; Schimmerling, Walter

    2000-01-01

    The human exploration of Mars will impose unavoidable health risks from galactic cosmic rays (GCR) and possibly solar particle events (SPE). It is the goal of NASA's Space Radiation Health Program to develop the capability to predict health risks with significant accuracy to ensure that risks are well below acceptable levels and to allow for mitigation approaches to be effective at reasonable costs. End-to-End risk assessment is the approach being followed to understand proton and heavy ion damage at the molecular, cellular, and tissue levels in order to predict the probability of the major health risk including cancer, neurological disorders, hereditary effects, cataracts, and acute radiation sickness and to develop countermeasures for mitigating risks.

  14. End-to-End Trajectory for Conjunction Class Mars Missions Using Hybrid Solar-Electric/Chemical Transportation System

    NASA Technical Reports Server (NTRS)

    Chai, Patrick R.; Merrill, Raymond G.; Qu, Min

    2016-01-01

    NASA's Human Spaceflight Architecture Team is developing a reusable hybrid transportation architecture in which both chemical and solar-electric propulsion systems are used to deliver crew and cargo to exploration destinations. By combining chemical and solar-electric propulsion into a single spacecraft and applying each where it is most effective, the hybrid architecture enables a series of Mars trajectories that are more fuel efficient than an all chemical propulsion architecture without significant increases to trip time. The architecture calls for the aggregation of exploration assets in cislunar space prior to departure for Mars and utilizes high energy lunar-distant high Earth orbits for the final staging prior to departure. This paper presents the detailed analysis of various cislunar operations for the EMC Hybrid architecture as well as the result of the higher fidelity end-to-end trajectory analysis to understand the implications of the design choices on the Mars exploration campaign.

  15. End-To-End Risk Assesment: From Genes and Protein to Acceptable Radiation Risks for Mars Exploration

    NASA Technical Reports Server (NTRS)

    Cucinotta, Francis A.; Schimmerling, Walter

    2000-01-01

    The human exploration of Mars will impose unavoidable health risks from galactic cosmic rays (GCR) and possibly solar particle events (SPE). It is the goal of NASA's Space Radiation Health Program to develop the capability to predict health risks with significant accuracy to ensure that risks are well below acceptable levels and to allow for mitigation approaches to be effective at reasonable costs. End-to-End risk assessment is the approach being followed to understand proton and heavy ion damage at the molecular, cellular, and tissue levels in order to predict the probability of the major health risk including cancer, neurological disorders, hereditary effects, cataracts, and acute radiation sickness and to develop countermeasures for mitigating risks.

  16. HITSZ_CDR: an end-to-end chemical and disease relation extraction system for BioCreative V

    PubMed Central

    Li, Haodi; Tang, Buzhou; Chen, Qingcai; Chen, Kai; Wang, Xiaolong; Wang, Baohua; Wang, Zhe

    2016-01-01

    In this article, an end-to-end system was proposed for the challenge task of disease named entity recognition (DNER) and chemical-induced disease (CID) relation extraction in BioCreative V, where DNER includes disease mention recognition (DMR) and normalization (DN). Evaluation on the challenge corpus showed that our system achieved the highest F1-scores 86.93% on DMR, 84.11% on DN, 43.04% on CID relation extraction, respectively. The F1-score on DMR is higher than our previous one reported by the challenge organizers (86.76%), the highest F1-score of the challenge. Database URL: http://database.oxfordjournals.org/content/2016/baw077 PMID:27270713

  17. The MARS pathfinder end-to-end information system: A pathfinder for the development of future NASA planetary missions

    NASA Technical Reports Server (NTRS)

    Cook, Richard A.; Kazz, Greg J.; Tai, Wallace S.

    1996-01-01

    The development of the Mars pathfinder is considered with emphasis on the End-to-End Information System (EEIS) development approach. The primary mission objective is to successfully develop and deliver a single flight system to the Martian surface, demonstrating entry, descent and landing. The EEIS is a set of functions distributed throughout the flight, ground and Mission Operation Systems (MOS) that inter-operate in order to control, collect, transport, process, store and analyze the uplink and downlink information flows of the mission. Coherence between the mission systems is achieved though the EEIS architecture. The key characteristics of the system are: a concurrent engineering approach for the development of flight, ground and mission operation systems; the fundamental EEIS architectural heuristics; a phased incremental EEIS development and test approach, and an EEIS design deploying flight, ground and MOS operability features, including integrated ground and flight based toolsets.

  18. The MARS pathfinder end-to-end information system: A pathfinder for the development of future NASA planetary missions

    NASA Technical Reports Server (NTRS)

    Cook, Richard A.; Kazz, Greg J.; Tai, Wallace S.

    1996-01-01

    The development of the Mars pathfinder is considered with emphasis on the End-to-End Information System (EEIS) development approach. The primary mission objective is to successfully develop and deliver a single flight system to the Martian surface, demonstrating entry, descent and landing. The EEIS is a set of functions distributed throughout the flight, ground and Mission Operation Systems (MOS) that inter-operate in order to control, collect, transport, process, store and analyze the uplink and downlink information flows of the mission. Coherence between the mission systems is achieved though the EEIS architecture. The key characteristics of the system are: a concurrent engineering approach for the development of flight, ground and mission operation systems; the fundamental EEIS architectural heuristics; a phased incremental EEIS development and test approach, and an EEIS design deploying flight, ground and MOS operability features, including integrated ground and flight based toolsets.

  19. NASA End-to-End Data System /NEEDS/ information adaptive system - Performing image processing onboard the spacecraft

    NASA Technical Reports Server (NTRS)

    Kelly, W. L.; Howle, W. M.; Meredith, B. D.

    1980-01-01

    The Information Adaptive System (IAS) is an element of the NASA End-to-End Data System (NEEDS) Phase II and is focused toward onbaord image processing. Since the IAS is a data preprocessing system which is closely coupled to the sensor system, it serves as a first step in providing a 'Smart' imaging sensor. Some of the functions planned for the IAS include sensor response nonuniformity correction, geometric correction, data set selection, data formatting, packetization, and adaptive system control. The inclusion of these sensor data preprocessing functions onboard the spacecraft will significantly improve the extraction of information from the sensor data in a timely and cost effective manner and provide the opportunity to design sensor systems which can be reconfigured in near real time for optimum performance. The purpose of this paper is to present the preliminary design of the IAS and the plans for its development.

  20. The initial data products from the EUVE software - A photon's journey through the End-to-End System

    NASA Technical Reports Server (NTRS)

    Antia, Behram

    1993-01-01

    The End-to-End System (EES) is a unique collection of software modules created for use at the Center for EUV Astrophysics. The 'pipeline' is a shell script which executes selected EES modules and creates initial data products: skymaps, data sets for individual sources (called 'pigeonholes') and catalogs of sources. This article emphasizes the data from the all-sky survey, conducted between July 22, 1992 and January 21, 1993. A description of each of the major data products will be given and, as an example of how the pipeline works, the reader will follow a photon's path through the software pipeline into a pigeonhole. These data products are the primary goal of the EUVE all-sky survey mission, and so their relative importance for the follow-up science will also be discussed.

  1. SU-E-T-282: Dose Measurements with An End-To-End Audit Phantom for Stereotactic Radiotherapy

    SciTech Connect

    Jones, R; Artschan, R; Thwaites, D; Lehmann, J

    2015-06-15

    Purpose: Report on dose measurements as part of an end-to-end test for stereotactic radiotherapy, using a new audit tool, which allows audits to be performed efficiently either by an onsite team or as a postal audit. Methods: Film measurements have been performed with a new Stereotactic Cube Phantom. The phantom has been designed to perform Winston Lutz type position verification measurements and dose measurements in one setup. It comprises a plastic cube with a high density ball in its centre (used for MV imaging with film or EPID) and low density markers in the periphery (used for Cone Beam Computed Tomography, CBCT imaging). It also features strategically placed gold markers near the posterior and right surfaces, which can be used to calculate phantom rotations on MV images. Slit-like openings allow insertion of film or other detectors.The phantom was scanned and small field treatment plans were created. The fields do not traverse any inhomogeneities of the phantom on their paths to the measurement location. The phantom was setup at the delivery system using CBCT imaging. The calculated treatment fields were delivered, each with a piece of radiochromic film (EBT3) placed in the anterior film holder of the phantom. MU had been selected in planning to achieve similar exposures on all films. Calibration films were exposed in solid water for dose levels around the expected doses. Films were scanned and analysed following established procedures. Results: Setup of the cube showed excellent suitability for CBCT 3D alignment. MV imaging with EPID allowed for clear identification of all markers. Film based dose measurements showed good agreement for MLC created fields down to 0.5 mm × 0.5 mm. Conclusion: An end-to-end audit phantom for stereotactic radiotherapy has been developed and tested.

  2. Monte Carlo Estimate to Improve Photon Energy Spectrum Reconstruction

    NASA Astrophysics Data System (ADS)

    Sawchuk, S.

    Improvements to planning radiation treatment for cancer patients and quality control of medical linear accelerators (linacs) can be achieved with the explicit knowledge of the photon energy spectrum. Monte Carlo (MC) simulations of linac treatment heads and experimental attenuation analysis are among the most popular ways of obtaining these spectra. Attenuation methods which combine measurements under narrow beam geometry and the associated calculation techniques to reconstruct the spectrum from the acquired data are very practical in a clinical setting and they can also serve to validate MC simulations. A novel reconstruction method [1] which has been modified [2] utilizes a Simpson's rule (SR) to approximate and discretize (1)

  3. Discrete Spectrum Reconstruction Using Integral Approximation Algorithm.

    PubMed

    Sizikov, Valery; Sidorov, Denis

    2017-07-01

    An inverse problem in spectroscopy is considered. The objective is to restore the discrete spectrum from observed spectrum data, taking into account the spectrometer's line spread function. The problem is reduced to solution of a system of linear-nonlinear equations (SLNE) with respect to intensities and frequencies of the discrete spectral lines. The SLNE is linear with respect to lines' intensities and nonlinear with respect to the lines' frequencies. The integral approximation algorithm is proposed for the solution of this SLNE. The algorithm combines solution of linear integral equations with solution of a system of linear algebraic equations and avoids nonlinear equations. Numerical examples of the application of the technique, both to synthetic and experimental spectra, demonstrate the efficacy of the proposed approach in enabling an effective enhancement of the spectrometer's resolution.

  4. End-to-End Information System design at the NASA Jet Propulsion Laboratory. [data transmission between user and space-based sensor

    NASA Technical Reports Server (NTRS)

    Hooke, A. J.

    1978-01-01

    In recognition of a pressing need of the 1980s to optimize the two-way flow of information between a ground-based user and a remote-space-based sensor, an end-to-end approach to the design of information systems has been adopted at the JPL. This paper reviews End-to-End Information System (EEIS) activity at the JPL, with attention given to the scope of the EEIS transfer function, and functional and physical elements of the EEIS. The relationship between the EEIS and the NASA End-to-End Data System program is discussed.

  5. End-to-End Information System design at the NASA Jet Propulsion Laboratory. [data transmission between user and space-based sensor

    NASA Technical Reports Server (NTRS)

    Hooke, A. J.

    1978-01-01

    In recognition of a pressing need of the 1980s to optimize the two-way flow of information between a ground-based user and a remote-space-based sensor, an end-to-end approach to the design of information systems has been adopted at the JPL. This paper reviews End-to-End Information System (EEIS) activity at the JPL, with attention given to the scope of the EEIS transfer function, and functional and physical elements of the EEIS. The relationship between the EEIS and the NASA End-to-End Data System program is discussed.

  6. Thermodynamic state retrieval from microwave occultation data and performance analysis based on end-to-end simulations

    NASA Astrophysics Data System (ADS)

    Schweitzer, S.; Kirchengast, G.; Schwaerz, M.; Fritzer, J.; Gorbunov, M. E.

    2011-05-01

    Microwave occultation using centimeter- and millimeter-wave signals between low Earth orbit (LEO) satellites (LEO microwave occultation, LMO) is an advancement of GPS radio occultation (GRO) exploiting in addition to refraction also absorption of signals. Beyond the successful GRO refractivity profiling capability, which leaves a temperature-humidity ambiguity in the troposphere where moisture cannot be neglected, LMO enables joint retrieval of pressure, temperature, and humidity profiles without auxiliary background information. Here we focus on the upper troposphere/lower stratosphere and advance the LMO method in two ways: (1) we introduce a new retrieval algorithm for processing LMO excess phase and amplitude data from multiple frequencies, complementing existing GRO retrieval algorithms, and (2) we employ the algorithm in an ensemble-based end-to-end performance analysis and assess the accuracy of pressure, temperature, and humidity profiles retrieved from the LMO data. The end-to-end simulations were carried out under quasi-realistic conditions for a day of LEO-LEO occultation events, based on a high-resolution atmospheric analysis of the European Centre for Medium-Range Weather Forecasts (ECMWF) and accounting for scintillation noise from turbulence and instrumental errors. The new algorithm was found robust, fast, and versatile to adequately process LMO data under all conditions from dry and clear to moist and cloudy air as contained in the ECMWF analysis. The retrieved pressure, temperature, and humidity profiles were generally found unbiased and within target accuracy requirements, set by scientific objectives of atmosphere and climate research going to be supported by the data, of <0.2% (pressure), <0.5 K (temperature), and <10% (humidity). Extending a "minimum" LMO design with three frequencies near 22 GHz with two added frequencies near 183 GHz favorably provides humidity retrieval into the lower stratosphere but already the "minimum" design resolves

  7. A novel end-to-end classifier using domain transferred deep convolutional neural networks for biomedical images.

    PubMed

    Pang, Shuchao; Yu, Zhezhou; Orgun, Mehmet A

    2017-03-01

    Highly accurate classification of biomedical images is an essential task in the clinical diagnosis of numerous medical diseases identified from those images. Traditional image classification methods combined with hand-crafted image feature descriptors and various classifiers are not able to effectively improve the accuracy rate and meet the high requirements of classification of biomedical images. The same also holds true for artificial neural network models directly trained with limited biomedical images used as training data or directly used as a black box to extract the deep features based on another distant dataset. In this study, we propose a highly reliable and accurate end-to-end classifier for all kinds of biomedical images via deep learning and transfer learning. We first apply domain transferred deep convolutional neural network for building a deep model; and then develop an overall deep learning architecture based on the raw pixels of original biomedical images using supervised training. In our model, we do not need the manual design of the feature space, seek an effective feature vector classifier or segment specific detection object and image patches, which are the main technological difficulties in the adoption of traditional image classification methods. Moreover, we do not need to be concerned with whether there are large training sets of annotated biomedical images, affordable parallel computing resources featuring GPUs or long times to wait for training a perfect deep model, which are the main problems to train deep neural networks for biomedical image classification as observed in recent works. With the utilization of a simple data augmentation method and fast convergence speed, our algorithm can achieve the best accuracy rate and outstanding classification ability for biomedical images. We have evaluated our classifier on several well-known public biomedical datasets and compared it with several state-of-the-art approaches. We propose a robust

  8. End-to-end Cyberinfrastructure and Data Services for Earth System Science Education and Research: A vision for the future

    NASA Astrophysics Data System (ADS)

    Ramamurthy, M. K.

    2006-05-01

    yet revolutionary way of building applications and methods to connect and exchange information over the Web. This new approach, based on XML - a widely accepted format for exchanging data and corresponding semantics over the Internet - enables applications, computer systems, and information processes to work together in fundamentally different ways. Likewise, the advent of digital libraries, grid computing platforms, interoperable frameworks, standards and protocols, open-source software, and community atmospheric models have been important drivers in shaping the use of a new generation of end-to-end cyberinfrastructure for solving some of the most challenging scientific and educational problems. In this talk, I will present an overview of the scientific, technological, and educational landscape, discuss recent developments in cyberinfrastructure, and Unidata's role in and vision for providing easy-to use, robust, end-to-end data services for solving geoscientific problems and advancing student learning.

  9. End-to-end Cyberinfrastructure and Data Services for Earth System Science Education and Research: Unidata's Plans and Directions

    NASA Astrophysics Data System (ADS)

    Ramamurthy, M.

    2005-12-01

    work together in a fundamentally different way. Likewise, the advent of digital libraries, grid computing platforms, interoperable frameworks, standards and protocols, open-source software, and community atmospheric models have been important drivers in shaping the use of a new generation of end-to-end cyberinfrastructure for solving some of the most challenging scientific and educational problems. In this talk, I will present an overview of the scientific, technological, and educational drivers and discuss recent developments in cyberinfrastructure and Unidata's role and directions in providing robust, end-to-end data services for solving geoscientific problems and advancing student learning.

  10. Unmanned Aircraft Systems Minimum Operations Performance Standards End-to-End Verification and Validation (E2-V2) Simulation

    NASA Technical Reports Server (NTRS)

    Ghatas, Rania W.; Jack, Devin P.; Tsakpinis, Dimitrios; Vincent, Michael J.; Sturdy, James L.; Munoz, Cesar A.; Hoffler, Keith D.; Dutle, Aaron M.; Myer, Robert R.; Dehaven, Anna M.; hide

    2017-01-01

    As Unmanned Aircraft Systems (UAS) make their way to mainstream aviation operations within the National Airspace System (NAS), research efforts are underway to develop a safe and effective environment for their integration into the NAS. Detect and Avoid (DAA) systems are required to account for the lack of "eyes in the sky" due to having no human on-board the aircraft. The current NAS relies on pilot's vigilance and judgement to remain Well Clear (CFR 14 91.113) of other aircraft. RTCA SC-228 has defined DAA Well Clear (DAAWC) to provide a quantified Well Clear volume to allow systems to be designed and measured against. Extended research efforts have been conducted to understand and quantify system requirements needed to support a UAS pilot's ability to remain well clear of other aircraft. The efforts have included developing and testing sensor, algorithm, alerting, and display requirements. More recently, sensor uncertainty and uncertainty mitigation strategies have been evaluated. This paper discusses results and lessons learned from an End-to-End Verification and Validation (E2-V2) simulation study of a DAA system representative of RTCA SC-228's proposed Phase I DAA Minimum Operational Performance Standards (MOPS). NASA Langley Research Center (LaRC) was called upon to develop a system that evaluates a specific set of encounters, in a variety of geometries, with end-to-end DAA functionality including the use of sensor and tracker models, a sensor uncertainty mitigation model, DAA algorithmic guidance in both vertical and horizontal maneuvering, and a pilot model which maneuvers the ownship aircraft to remain well clear from intruder aircraft, having received collective input from the previous modules of the system. LaRC developed a functioning batch simulation and added a sensor/tracker model from the Federal Aviation Administration (FAA) William J. Hughes Technical Center, an in-house developed sensor uncertainty mitigation strategy, and implemented a pilot

  11. A novel end-to-end fault detection and localization protocol for wavelength-routed WDM networks

    NASA Astrophysics Data System (ADS)

    Zeng, Hongqing; Vukovic, Alex; Huang, Changcheng

    2005-09-01

    Recently the wavelength division multiplexing (WDM) networks are becoming prevalent for telecommunication networks. However, even a very short disruption of service caused by network faults may lead to high data loss in such networks due to the high date rates, increased wavelength numbers and density. Therefore, the network survivability is critical and has been intensively studied, where fault detection and localization is the vital part but has received disproportional attentions. In this paper we describe and analyze an end-to-end lightpath fault detection scheme in data plane with the fault notification in control plane. The endeavor is focused on reducing the fault detection time. In this protocol, the source node of each lightpath keeps sending hello packets to the destination node exactly following the path for data traffic. The destination node generates an alarm once a certain number of consecutive hello packets are missed within a given time period. Then the network management unit collects all alarms and locates the faulty source based on the network topology, as well as sends fault notification messages via control plane to either the source node or all upstream nodes along the lightpath. The performance evaluation shows such a protocol can achieve fast fault detection, and at the same time, the overhead brought to the user data by hello packets is negligible.

  12. Towards a cross-platform software framework to support end-to-end hydrometeorological sensor network deployment

    NASA Astrophysics Data System (ADS)

    Celicourt, P.; Sam, R.; Piasecki, M.

    2016-12-01

    Global phenomena such as climate change and large scale environmental degradation require the collection of accurate environmental data at detailed spatial and temporal scales from which knowledge and actionable insights can be derived using data science methods. Despite significant advances in sensor network technologies, sensors and sensor network deployment remains a labor-intensive, time consuming, cumbersome and expensive task. These factors demonstrate why environmental data collection remains a challenge especially in developing countries where technical infrastructure, expertise and pecuniary resources are scarce. In addition, they also demonstrate the reason why dense and long-term environmental data collection has been historically quite difficult. Moreover, hydrometeorological data collection efforts usually overlook the (critically important) inclusion of a standards-based system for storing, managing, organizing, indexing, documenting and sharing sensor data. We are developing a cross-platform software framework using the Python programming language that will allow us to develop a low cost end-to-end (from sensor to publication) system for hydrometeorological conditions monitoring. The software framework contains provision for sensor, sensor platforms, calibration and network protocols description, sensor programming, data storage, data publication and visualization and more importantly data retrieval in a desired unit system. It is being tested on the Raspberry Pi microcomputer as end node and a laptop PC as the base station in a wireless setting.

  13. End-to-end simulation of high-contrast imaging systems: methods and results for the PICTURE mission family

    NASA Astrophysics Data System (ADS)

    Douglas, Ewan S.; Hewasawam, Kuravi; Mendillo, Christopher B.; Cahoy, Kerri L.; Cook, Timothy A.; Finn, Susanna C.; Howe, Glenn A.; Kuchner, Marc J.; Lewis, Nikole K.; Marinan, Anne D.; Mawet, Dimitri; Chakrabarti, Supriya

    2015-09-01

    We describe a set of numerical approaches to modeling the performance of space flight high-contrast imaging payloads. Mission design for high-contrast imaging requires numerical wavefront error propagation to ensure accurate component specifications. For constructed instruments, wavelength and angle-dependent throughput and contrast models allow detailed simulations of science observations, allowing mission planners to select the most productive science targets. The PICTURE family of missions seek to quantify the optical brightness of scattered light from extrasolar debris disks via several high-contrast imaging techniques: sounding rocket (the Planet Imaging Concept Testbed Using a Rocket Experiment) and balloon flights of a visible nulling coronagraph, as well as a balloon flight of a vector vortex coronagraph (the Planetary Imaging Concept Testbed Using a Recoverable Experiment - Coronagraph, PICTURE-C). The rocket mission employs an on-axis 0.5m Gregorian telescope, while the balloon flights will share an unobstructed off-axis 0.6m Gregorian. This work details the flexible approach to polychromatic, end-to-end physical optics simulations used for both the balloon vector vortex coronagraph and rocket visible nulling coronagraph missions. We show the preliminary PICTURE-C telescope and vector vortex coronagraph design will achieve 10-8 contrast without post-processing as limited by realistic optics, but not considering polarization or low-order errors. Simulated science observations of the predicted warm ring around Epsilon Eridani illustrate the performance of both missions.

  14. Saphenous vein to internal mammary artery end-to-end composite grafts for coronary artery bypass. Late follow-up.

    PubMed

    Paterson, Hugh S; Thakkar, Jay; Byth, Karen; Denniss, A Robert

    2015-02-01

    Internal mammary artery (IMA) grafts provide equal or superior graft patency compared to other conduits. The IMA length limits extensive myocardial revascularisation with IMA grafts alone. This study aimed to determine the results of lengthening free IMAs with a short proximal segment of saphenous vein (SV) to enable more extensive myocardial revascularisation. Patients (n=92) who underwent end-to-end composite SV-IMA grafts were followed up through cardiology and death register databases. The mean patient age was 57.5 years and median follow up 10.9 years. There was no perioperative mortality and 10-year survival was 89.6%. Thirty-one patients (34%) underwent repeat angiography at a median of 2.8 years postoperatively. The 10-year freedom from angiography showing SV segment occlusion was 89% with a median time to angiography of 2.3 years (nine patients). The number of distal anastomoses was the only independent predictor of SV segment occlusion HR per anastomosis=0.26 (p=0.01). In five sequential grafts to the circumflex and right coronary systems, the IMA portion of the graft remained patent following SV segment occlusion. Graft patency is improved by a greater number of coronary artery anastomoses. Copyright © 2014 Australian and New Zealand Society of Cardiac and Thoracic Surgeons (ANZSCTS) and the Cardiac Society of Australia and New Zealand (CSANZ). Published by Elsevier B.V. All rights reserved.

  15. Hardware and Methods of the Optical End-to-End Test of the Far Ultraviolet Spectroscopic Explorer (FUSE)

    NASA Technical Reports Server (NTRS)

    Conard, Steven J.; Redman, Kevin W.; Barkhouser, Robert H.; McGuffey, Doug B.; Smee, Stephen; Ohl, Raymond G.; Kushner, Gary

    1999-01-01

    The Far Ultraviolet Spectroscopic Explorer (FUSE), currently being tested and scheduled for a 1999 launch, is an astrophysics satellite designed to provide high spectral resolving power (Lambda/(Delta)Lambda = 24,000-30,000) over the interval 90.5-118.7 nm. The FUSE optical path consists of four co-aligned, normal incidence, off-axis parabolic, primary mirrors which illuminate separate Rowland circle spectrograph channels equipped with holographic gratings and delay line microchannel plate detectors. We describe the hardware and methods used for the optical end-to-end test of the FUSE instrument during satellite integration and test. Cost and schedule constraints forced us to devise a simplified version of the planned optical test which occurred in parallel with satellite thermal-vacuum testing. The optical test employed a collimator assembly which consisted of four co-aligned, 15" Cassegrain telescopes which were positioned above the FUSE instrument, providing a collimated beam for each optical channel. A windowed UV light source, remotely adjustable in three axes, was mounted at the focal plane of each collimator. Problems with the UV light sources, including high F-number and window failures, were the only major difficulties encountered during the test. The test succeeded in uncovering a significant problem with the secondary structure used for the instrument closeout cavity and, furthermore, showed that the mechanical solution was successful. The hardware was also used extensively for simulations of science observations, providing both UV light for spectra and visible light for the fine error sensor camera.

  16. Scaffold-integrated microchips for end-to-end in vitro tumor cell attachment and xenograft formation

    PubMed Central

    Lee, Jungwoo; Kohl, Nathaniel; Shanbhang, Sachin; Parekkadan, Biju

    2015-01-01

    Microfluidic technologies have substantially advanced cancer research by enabling the isolation of rare circulating tumor cells (CTCs) for diagnostic and prognostic purposes. The characterization of isolated CTCs has been limited due to the difficulty in recovering and growing isolated cells with high fidelity. Here, we present a strategy that uses a 3D scaffold, integrated into a microfludic device, as a transferable substrate that can be readily isolated after device operation for serial use in vivo as a transplanted tissue bed. Hydrogel scaffolds were incorporated into a PDMS fluidic chamber prior to bonding and were rehydrated in the chamber after fluid contact. The hydrogel matrix completely filled the fluid chamber, significantly increasing the surface area to volume ratio, and could be directly visualized under a microscope. Computational modeling defined different flow and pressure regimes that guided the conditions used to operate the chip. As a proof of concept using a model cell line, we confirmed human prostate tumor cell attachment in the microfluidic scaffold chip, retrieval of the scaffold en masse, and serial implantation of the scaffold to a mouse model with preserved xenograft development. With further improvement in capture efficiency, this approach can offer an end-to-end platform for the continuous study of isolated cancer cells from a biological fluid to a xenograft in mice. PMID:26709385

  17. Integrated end-to-end metrology and data analysis system for the advanced x-ray astrophysics facility telescope mirrors

    NASA Astrophysics Data System (ADS)

    Sarnik, Andrea; Zimmerman, Gerry

    1992-01-01

    The Advanced X-ray Astrophysics Facility (AXAF) consists of a nested set of six Wolter Type 1 x-ray telescopes. Each telescope consists of two mirrors (a parabola and a hyperbola). The high resolution optical performance required by AXAF and the size of the mirrors necessitates enormous quantities of data to characterize the optics. We will describe an end-to-end data system to be used for the metrology and fabrication of these 12 mirrors. The data system must have the capability of collecting optic metrology data from several instruments, processing and analyzing data, and generating machine instructions for the next grinding or polishing cycle. This system consists of personal computers interfaced to metrology instruments for the automatic collection of data, personal computers that control grinder/polishers, a mainframe computer for storing and managing data, and workstations for data processing and analysis. All of these computers are networked together to facilitate data transfer between computers. The system also includes an extensive library of software whose functions include processing mechanical and interferometric measurements, fitting polynomials to the data, performing frequency analysis of the data, and doing performance predictions. This data system has been used in the fabrication of the first two AXAF mirrors, produced by Hughes Danbury under contract to TRW. These mirrors are the first in a telescope that will be well beyond the performance of any existing x-ray telescopes.

  18. An end-to-end software solution for the analysis of high-throughput single-cell migration data

    PubMed Central

    Masuzzo, Paola; Huyck, Lynn; Simiczyjew, Aleksandra; Ampe, Christophe; Martens, Lennart; Van Troys, Marleen

    2017-01-01

    The systematic study of single-cell migration requires the availability of software for assisting data inspection, quality control and analysis. This is especially important for high-throughput experiments, where multiple biological conditions are tested in parallel. Although the field of cell migration can count on different computational tools for cell segmentation and tracking, downstream data visualization, parameter extraction and statistical analysis are still left to the user and are currently not possible within a single tool. This article presents a completely new module for the open-source, cross-platform CellMissy software for cell migration data management. This module is the first tool to focus specifically on single-cell migration data downstream of image processing. It allows fast comparison across all tested conditions, providing automated data visualization, assisted data filtering and quality control, extraction of various commonly used cell migration parameters, and non-parametric statistical analysis. Importantly, the module enables parameters computation both at the trajectory- and at the step-level. Moreover, this single-cell analysis module is complemented by a new data import module that accommodates multiwell plate data obtained from high-throughput experiments, and is easily extensible through a plugin architecture. In conclusion, the end-to-end software solution presented here tackles a key bioinformatics challenge in the cell migration field, assisting researchers in their high-throughput data processing. PMID:28205527

  19. WARP (workflow for automated and rapid production): a framework for end-to-end automated digital print workflows

    NASA Astrophysics Data System (ADS)

    Joshi, Parag

    2006-02-01

    Publishing industry is experiencing a major paradigm shift with the advent of digital publishing technologies. A large number of components in the publishing and print production workflow are transformed in this shift. However, the process as a whole requires a great deal of human intervention for decision making and for resolving exceptions during job execution. Furthermore, a majority of the best-of-breed applications for publishing and print production are intrinsically designed and developed to be driven by humans. Thus, the human-intensive nature of the current prepress process accounts for a very significant amount of the overhead costs in fulfillment of jobs on press. It is a challenge to automate the functionality of applications built with the model of human driven exectution. Another challenge is to orchestrate various components in the publishing and print production pipeline such that they work in a seamless manner to enable the system to perform automatic detection of potential failures and take corrective actions in a proactive manner. Thus, there is a great need for a coherent and unifying workflow architecture that streamlines the process and automates it as a whole in order to create an end-to-end digital automated print production workflow that does not involve any human intervention. This paper describes an architecture and building blocks that lay the foundation for a plurality of automated print production workflows.

  20. Scaffold-integrated microchips for end-to-end in vitro tumor cell attachment and xenograft formation.

    PubMed

    Lee, Jungwoo; Kohl, Nathaniel; Shanbhang, Sachin; Parekkadan, Biju

    2015-12-01

    Microfluidic technologies have substantially advanced cancer research by enabling the isolation of rare circulating tumor cells (CTCs) for diagnostic and prognostic purposes. The characterization of isolated CTCs has been limited due to the difficulty in recovering and growing isolated cells with high fidelity. Here, we present a strategy that uses a 3D scaffold, integrated into a microfludic device, as a transferable substrate that can be readily isolated after device operation for serial use in vivo as a transplanted tissue bed. Hydrogel scaffolds were incorporated into a PDMS fluidic chamber prior to bonding and were rehydrated in the chamber after fluid contact. The hydrogel matrix completely filled the fluid chamber, significantly increasing the surface area to volume ratio, and could be directly visualized under a microscope. Computational modeling defined different flow and pressure regimes that guided the conditions used to operate the chip. As a proof of concept using a model cell line, we confirmed human prostate tumor cell attachment in the microfluidic scaffold chip, retrieval of the scaffold en masse, and serial implantation of the scaffold to a mouse model with preserved xenograft development. With further improvement in capture efficiency, this approach can offer an end-to-end platform for the continuous study of isolated cancer cells from a biological fluid to a xenograft in mice.

  1. Minimizing Barriers in Learning for On-Call Radiology Residents-End-to-End Web-Based Resident Feedback System.

    PubMed

    Choi, Hailey H; Clark, Jennifer; Jay, Ann K; Filice, Ross W

    2017-08-24

    Feedback is an essential part of medical training, where trainees are provided with information regarding their performance and further directions for improvement. In diagnostic radiology, feedback entails a detailed review of the differences between the residents' preliminary interpretation and the attendings' final interpretation of imaging studies. While the on-call experience of independently interpreting complex cases is important to resident education, the more traditional synchronous "read-out" or joint review is impossible due to multiple constraints. Without an efficient method to compare reports, grade discrepancies, convey salient teaching points, and view images, valuable lessons in image interpretation and report construction are lost. We developed a streamlined web-based system, including report comparison and image viewing, to minimize barriers in asynchronous communication between attending radiologists and on-call residents. Our system provides real-time, end-to-end delivery of case-specific and user-specific feedback in a streamlined, easy-to-view format. We assessed quality improvement subjectively through surveys and objectively through participation metrics. Our web-based feedback system improved user satisfaction for both attending and resident radiologists, and increased attending participation, particularly with regards to cases where substantive discrepancies were identified.

  2. Reconstruction of the primordial power spectrum from CMB data

    SciTech Connect

    Guo, Zong-Kuan; Zhang, Yuan-Zhong; Schwarz, Dominik J. E-mail: dschwarz@physik.uni-bielefeld.de

    2011-08-01

    Measuring the deviation from scale invariance of the primordial power spectrum is a critical test of inflation. In this paper we reconstruct the shape of the primordial power spectrum of curvature perturbations from the cosmic microwave background data, including the 7-year Wilkinson Microwave Anisotropy Probe data and the Atacama Cosmology Telescope 148 GHz data, by using a binning method of a cubic spline interpolation in log-log space. We find that the power-law spectrum is preferred by the data and that the Harrison-Zel'dovich spectrum is disfavored at 95% confidence level. These conclusions hold with and without allowing for tensor modes, however the simpler model without tensors is preferred by the data. We do not find evidence for a feature in the primordial power spectrum — in full agreement with generic predictions from cosmological inflation.

  3. Adaptation and validation of a commercial head phantom for cranial radiosurgery dosimetry end-to-end audit.

    PubMed

    Dimitriadis, Alexis; Palmer, Antony L; Thomas, Russell A S; Nisbet, Andrew; Clark, Catharine H

    2017-06-01

    To adapt and validate an anthropomorphic head phantom for use in a cranial radiosurgery audit. Two bespoke inserts were produced for the phantom: one for providing the target and organ at risk for delineation and the other for performing dose measurements. The inserts were tested to assess their positional accuracy. A basic treatment plan dose verification with an ionization chamber was performed to establish a baseline accuracy for the phantom and beam model. The phantom and inserts were then used to perform dose verification measurements of a radiosurgery plan. The dose was measured with alanine pellets, EBT extended dose film and a plastic scintillation detector (PSD). Both inserts showed reproducible positioning (±0.5 mm) and good positional agreement between them (±0.6 mm). The basic treatment plan measurements showed agreement to the treatment planning system (TPS) within 0.5%. Repeated film measurements showed consistent gamma passing rates with good agreement to the TPS. For 2%-2 mm global gamma, the mean passing rate was 96.7% and the variation in passing rates did not exceed 2.1%. The alanine pellets and PSD showed good agreement with the TPS (-0.1% and 0.3% dose difference in the target) and good agreement with each other (within 1%). The adaptations to the phantom showed acceptable accuracies. The presence of alanine and PSD do not affect film measurements significantly, enabling simultaneous measurements by all three detectors. Advances in knowledge: A novel method for thorough end-to-end test of radiosurgery, with capability to incorporate all steps of the clinical pathway in a time-efficient and reproducible manner, suitable for a national audit.

  4. COMPUTATIONAL SIMULATIONS DEMONSTRATE ALTERED WALL SHEAR STRESS IN AORTIC COARCTATION PATIENTS TREATED BY RESECTION WITH END-TO-END ANASTOMOSIS

    PubMed Central

    LaDisa, John F.; Dholakia, Ronak J.; Figueroa, C. Alberto; Vignon-Clementel, Irene E.; Chan, Frandics P.; Samyn, Margaret M.; Cava, Joseph R.; Taylor, Charles A.; Feinstein, Jeffrey A.

    2011-01-01

    Background Atherosclerotic plaque in the descending thoracic aorta (dAo) is related to altered wall shear stress (WSS) for normal patients. Resection with end-to-end anastomosis (RWEA) is the gold standard for coarctation of the aorta (CoA) repair, but may lead to altered WSS indices that contribute to morbidity. Methods Computational fluid dynamics (CFD) models were created from imaging and blood pressure data for control subjects and age- and gender-matched CoA patients treated by RWEA (4 male, 2 female, 15±8 years). CFD analysis incorporated downstream vascular resistance and compliance to generate blood flow velocity, time-averaged WSS (TAWSS) and oscillatory shear index (OSI) results. These indices were quantified longitudinally and circumferentially in the dAo, and several visualization methods were used to highlight regions of potential hemodynamic susceptibility. Results The total dAo area exposed to subnormal TAWSS and OSI was similar between groups, but several statistically significant local differences were revealed. Control subjects experienced left-handed rotating patterns of TAWSS and OSI down the dAo. TAWSS was elevated in CoA patients near the site of residual narrowings and OSI was elevated distally, particularly along the left dAo wall. Differences in WSS indices between groups were negligible more than 5 dAo diameters distal to the aortic arch. Conclusions Localized differences in WSS indices within the dAo of CoA patients treated by RWEA suggest that plaque may form in unique locations influenced by the surgical repair. These regions can be visualized in familiar and intuitive ways allowing clinicians to track their contribution to morbidity in longitudinal studies. PMID:21801315

  5. End-to-end sensor simulation for spectral band selection and optimization with application to the Sentinel-2 mission.

    PubMed

    Segl, Karl; Richter, Rudolf; Küster, Theres; Kaufmann, Hermann

    2012-02-01

    An end-to-end sensor simulation is a proper tool for the prediction of the sensor's performance over a range of conditions that cannot be easily measured. In this study, such a tool has been developed that enables the assessment of the optimum spectral resolution configuration of a sensor based on key applications. It employs the spectral molecular absorption and scattering properties of materials that are used for the identification and determination of the abundances of surface and atmospheric constituents and their interdependence on spatial resolution and signal-to-noise ratio as a basis for the detailed design and consolidation of spectral bands for the future Sentinel-2 sensor. The developed tools allow the computation of synthetic Sentinel-2 spectra that form the frame for the subsequent twofold analysis of bands in the atmospheric absorption and window regions. One part of the study comprises the assessment of optimal spatial and spectral resolution configurations for those bands used for atmospheric correction, optimized with regard to the retrieval of aerosols, water vapor, and the detection of cirrus clouds. The second part of the study presents the optimization of thematic bands, mainly driven by the spectral characteristics of vegetation constituents and minerals. The investigation is performed for different wavelength ranges because most remote sensing applications require the use of specific band combinations rather than single bands. The results from the important "red-edge" and the "short-wave infrared" domains are presented. The recommended optimum spectral design predominantly confirms the sensor parameters given by the European Space Agency. The system is capable of retrieving atmospheric and geobiophysical parameters with enhanced quality compared to existing multispectral sensors. Minor spectral changes of single bands are discussed in the context of typical remote sensing applications, supplemented by the recommendation of a few new bands for

  6. End-to-end gene fusions and their impact on the production of multifunctional biomass degrading enzymes

    SciTech Connect

    Rizk, Mazen; Antranikian, Garabed; Elleuche, Skander

    2012-11-09

    Highlights: Black-Right-Pointing-Pointer Multifunctional enzymes offer an interesting approach for biomass degradation. Black-Right-Pointing-Pointer Size and conformation of separate constructs play a role in the effectiveness of chimeras. Black-Right-Pointing-Pointer A connecting linker allows for maximal flexibility and increased thermostability. Black-Right-Pointing-Pointer Genes with functional similarities are the best choice for fusion candidates. -- Abstract: The reduction of fossil fuels, coupled with its increase in price, has made the search for alternative energy resources more plausible. One of the topics gaining fast interest is the utilization of lignocellulose, the main component of plants. Its primary constituents, cellulose and hemicellulose, can be degraded by a series of enzymes present in microorganisms, into simple sugars, later used for bioethanol production. Thermophilic bacteria have proven to be an interesting source of enzymes required for hydrolysis since they can withstand high and denaturing temperatures, which are usually required for processes involving biomass degradation. However, the cost associated with the whole enzymatic process is staggering. A solution for cost effective and highly active production is through the construction of multifunctional enzyme complexes harboring the function of more than one enzyme needed for the hydrolysis process. There are various strategies for the degradation of complex biomass ranging from the regulation of the enzymes involved, to cellulosomes, and proteins harboring more than one enzymatic activity. In this review, the construction of multifunctional biomass degrading enzymes through end-to-end gene fusions, and its impact on production and activity by choosing the enzymes and linkers is assessed.

  7. Designing an End-to-End System for Data Storage, Analysis, and Visualization for an Urban Environmental Observatory

    NASA Astrophysics Data System (ADS)

    McGuire, M. P.; Welty, C.; Gangopadhyay, A.; Karabatis, G.; Chen, Z.

    2006-05-01

    The urban environment is formed by complex interactions between natural and human dominated systems, the study of which requires the collection and analysis of very large datasets that span many disciplines. Recent advances in sensor technology and automated data collection have improved the ability to monitor urban environmental systems and are making the idea of an urban environmental observatory a reality. This in turn has created a number of potential challenges in data management and analysis. We present the design of an end-to-end system to store, analyze, and visualize data from a prototype urban environmental observatory based at the Baltimore Ecosystem Study, a National Science Foundation Long Term Ecological Research site (BES LTER). We first present an object-relational design of an operational database to store high resolution spatial datasets as well as data from sensor networks, archived data from the BES LTER, data from external sources such as USGS NWIS, EPA Storet, and metadata. The second component of the system design includes a spatiotemporal data warehouse consisting of a data staging plan and a multidimensional data model designed for the spatiotemporal analysis of monitoring data. The system design also includes applications for multi-resolution exploratory data analysis, multi-resolution data mining, and spatiotemporal visualization based on the spatiotemporal data warehouse. Also the system design includes interfaces with water quality models such as HSPF, SWMM, and SWAT, and applications for real-time sensor network visualization, data discovery, data download, QA/QC, and backup and recovery, all of which are based on the operational database. The system design includes both internet and workstation-based interfaces. Finally we present the design of a laboratory for spatiotemporal analysis and visualization as well as real-time monitoring of the sensor network.

  8. Investigating the spatial accuracy of CBCT-guided cranial radiosurgery: A phantom end-to-end test study.

    PubMed

    Calvo-Ortega, Juan-Francisco; Hermida-López, Marcelino; Moragues-Femenía, Sandra; Pozo-Massó, Miquel; Casals-Farran, Joan

    2017-03-01

    To evaluate the spatial accuracy of a frameless cone-beam computed tomography (CBCT)-guided cranial radiosurgery (SRS) using an end-to-end (E2E) phantom test methodology. Five clinical SRS plans were mapped to an acrylic phantom containing a radiochromic film. The resulting phantom-based plans (E2E plans) were delivered four times. The phantom was setup on the treatment table with intentional misalignments, and CBCT-imaging was used to align it prior to E2E plan delivery. Comparisons (global gamma analysis) of the planned and delivered dose to the film were performed using a commercial triple-channel film dosimetry software. The necessary distance-to-agreement to achieve a 95% (DTA95) gamma passing rate for a fixed 3% dose difference provided an estimate of the spatial accuracy of CBCT-guided SRS. Systematic (∑) and random (σ) error components, as well as 95% confidence levels were derived for the DTA95 metric. The overall systematic spatial accuracy averaged over all tests was 1.4mm (SD: 0.2mm), with a corresponding 95% confidence level of 1.8mm. The systematic (Σ) and random (σ) spatial components of the accuracy derived from the E2E tests were 0.2mm and 0.8mm, respectively. The E2E methodology used in this study allowed an estimation of the spatial accuracy of our CBCT-guided SRS procedure. Subsequently, a PTV margin of 2.0mm is currently used in our department. Copyright © 2017 Associazione Italiana di Fisica Medica. Published by Elsevier Ltd. All rights reserved.

  9. Greenhouse gas profiling by infrared-laser and microwave occultation in cloudy air: Results from end-to-end simulations

    NASA Astrophysics Data System (ADS)

    Proschek, V.; Kirchengast, G.; Emde, C.; Schweitzer, S.

    2014-11-01

    The new mission concept of microwave and infrared-laser occultation between Low Earth Orbit satellites (LMIO) is capable to provide accurate, consistent, and long-term stable measurements of many essential climate variables. These include temperature, humidity, key greenhouse gases (GHGs) such as carbon dioxide and methane, and line of sight wind speed, all with focus on profiling the upper troposphere and lower stratosphere. The GHG retrieval performance from LMIO data was so far analyzed under clear-air conditions only, without clouds and scintillations from turbulence. Here we present and evaluate an algorithm, built into an already published clear-air algorithm, which copes with cloud and scintillation influences on the infrared-laser transmission profiles used for GHG retrieval. We find that very thin ice clouds fractionally extinct the infrared-laser signals, thicker but broken ice clouds block them over limited altitude ranges, and liquid water clouds generally block them so that their cloud top altitudes typically constitute the limit to tropospheric penetration of profiles. The advanced algorithm penetrates through broken cloudiness. It achieves this by producing a cloud flagging profile from cloud-perturbed infrared-laser signals, which then enables bridging of transmission profile gaps via interpolation. Evaluating the retrieval performance with quasi-realistic end-to-end simulations, including high-resolution cloud data and scintillations from turbulence, we find a small increase only of GHG retrieval RMS errors due to broken-cloud scenes and the profiles remain essentially unbiased as in clear air. These results are encouraging for future LMIO implementation, indicating that GHG profiles can be retrieved through broken cloudiness, maximizing upper troposphere coverage.

  10. Surgical repair of acute Achilles tendon rupture with an end-to-end tendon suture and tendon flap.

    PubMed

    Corradino, B; Di Lorenzo, S; Calamia, C; Moschella, F

    2015-08-01

    Achilles tendon ruptures are becoming more common. Complications after open or minimally invasive surgery are: recurrent rupture (2-8%), wound breakdown, deep infections, granuloma, and fistulas. The authors expose their experience with a personal technique. In 8 patients with acute rupture of Achilles tendon the surgery was performed at least 25 days after trauma. Clinical exam and MR demonstrated in all case a total lesion of tendon. After a posterolateral skin incision the tendon stumps were debrided and suture in end-to-end fashion. A tendon flap was harvested from the proximal part of the tendon, in order to protect and reinforce the suture itself. A plaster cast was applied for 3 weeks and the patients started the rehabilitation protocol. After 4 months all patients returned to pre-injury daily activities. The mean follow up was 13 months (ranged between 6 and 24 months). No major complications occurred. The posterolateral skin incision, not above the tendon, preserves the vascularity of the soft tissues, allows identifying and not accidentally injuring the sural nerve, and prevents the cutaneous scar is overlapped the tendon. In this way is favoured physiological tendon sliding. The preparation of the flap tendon does not weaken the overall strength of the tendon and protects the tendon suture. The tension on sutured stumps is less than being spread over a larger area. In our sample of 8 patients the absence of short-and long-term complications and the rapid functional recovery after surgery suggest that the technique used is safe and effective. Copyright © 2015 Elsevier Ltd. All rights reserved.

  11. Innovative strategy for effective critical laboratory result management: end-to-end process using automation and manual call centre.

    PubMed

    Ti, Lian Kah; Ang, Sophia Bee Leng; Saw, Sharon; Sethi, Sunil Kumar; Yip, James W L

    2012-08-01

    Timely reporting and acknowledgement are crucial steps in critical laboratory results (CLR) management. The authors previously showed that an automated pathway incorporating short messaging system (SMS) texts, auto-escalation, and manual telephone back-up improved the rate and speed of physician acknowledgement compared with manual telephone calling alone. This study investigated if it also improved the rate and speed of physician intervention to CLR and whether utilising the manual back-up affected intervention rates. Data from seven audits between November 2007 and January 2011 were analysed. These audits were carried out to assess the robustness of CLR reporting process in the authors' institution. Comparisons were made in the rate and speed of acknowledgement and intervention between the audits performed before and after automation. Using the automation audits, the authors compared intervention data between communication with SMS only and when manual intervention was required. 1680 CLR were reported during the audit periods. Automation improved the rate (100% vs 84.2%; p<0.001) and speed (median 12 min vs 23 min; p<0.001) of CLR acknowledgement. It also improved the rate (93.7% vs 84.0%, p<0.001) and speed (median 21 min vs 109 min; p<0.001) of CLR intervention. From the automation audits, the use of SMS only did not improve physician intervention rates. The automated communication pathway improved physician intervention rate and time in tandem with improved acknowledgement rate and time when compared with manual telephone calling. The use of manual intervention to augment automation did not adversely affect physician intervention rate, implying that an end-to-end pathway was more important than automation alone.

  12. End-to-end simulations and planning of a small space telescopes: Galaxy Evolution Spectroscopic Explorer: a case study

    NASA Astrophysics Data System (ADS)

    Heap, Sara; Folta, David; Gong, Qian; Howard, Joseph; Hull, Tony; Purves, Lloyd

    2016-08-01

    Large astronomical missions are usually general-purpose telescopes with a suite of instruments optimized for different wavelength regions, spectral resolutions, etc. Their end-to-end (E2E) simulations are typically photons-in to flux-out calculations made to verify that each instrument meets its performance specifications. In contrast, smaller space missions are usually single-purpose telescopes, and their E2E simulations start with the scientific question to be answered and end with an assessment of the effectiveness of the mission in answering the scientific question. Thus, E2E simulations for small missions consist a longer string of calculations than for large missions, as they include not only the telescope and instrumentation, but also the spacecraft, orbit, and external factors such as coordination with other telescopes. Here, we illustrate the strategy and organization of small-mission E2E simulations using the Galaxy Evolution Spectroscopic Explorer (GESE) as a case study. GESE is an Explorer/Probe-class space mission concept with the primary aim of understanding galaxy evolution. Operation of a small survey telescope in space like GESE is usually simpler than operations of large telescopes driven by the varied scientific programs of the observers or by transient events. Nevertheless, both types of telescopes share two common challenges: maximizing the integration time on target, while minimizing operation costs including communication costs and staffing on the ground. We show in the case of GESE how these challenges can be met through a custom orbit and a system design emphasizing simplification and leveraging information from ground-based telescopes.

  13. End-to-end simulations of the visible tunable filter for the Daniel K. Inouye Solar Telescope

    NASA Astrophysics Data System (ADS)

    Schmidt, Wolfgang; Schubert, Matthias; Ellwarth, Monika; Baumgartner, Jörg; Bell, Alexander; Fischer, Andreas; Halbgewachs, Clemens; Heidecke, Frank; Kentischer, Thomas; von der Lühe, Oskar; Scheiffelen, Thomas; Sigwarth, Michael

    2016-08-01

    The Visible Tunable Filter (VTF) is a narrowband tunable filter system for imaging spectroscopy and spectropolarimetry based. The instrument will be one of the first-light instruments of the Daniel K. Inouye Solar Telescope that is currently under construction on Maui (Hawaii). The VTF is being developed by the Kiepenheuer Institut fuer Sonnenphysik in Freiburg as a German contribution to the DKIST. We perform end-to-end simulations of spectropolarimetric observations with the VTF to verify the science requirements of the instrument. The instrument is simulated with two Etalons, and with a single Etalon. The clear aperture of the Etalons is 250 mm, corresponding to a field of view with a diameter of 60 arcsec in the sky (42,000 km on the Sun). To model the large-scale figure errors we employ low-order Zernike polynomials (power and spherical aberration) with amplitudes of 2.5 nm RMS. We use an ideal polarization modulator with equal modulation coefficients of 3-1/2 for the polarization modulation We synthesize Stokes profiles of two iron lines (630.15 nm and 630.25 nm) and for the 854.2 nm line of calcium, for a range of magnetic field values and for several inclination angles. We estimated the photon noise on the basis of the DKIST and VTF transmission values, the atmospheric transmission and the spectral flux from the Sun. For the Fe 630.25 nm line, we obtain a sensitivity of 20 G for the longitudinal component and for 150 G for the transverse component, in agreement with the science requirements for the VTF.

  14. Results from Solar Reflective Band End-to-End Testing for VIIRS F1 Sensor Using T-SIRCUS

    NASA Technical Reports Server (NTRS)

    McIntire, Jeff; Moyer, David; McCarthy, James K.; DeLuccia, Frank; Xiong, Xiaoxiong; Butler, James J.; Guenther, Bruce

    2011-01-01

    Verification of the Visible Infrared Imager Radiometer Suite (VIIRS) End-to-End (E2E) sensor calibration is highly recommended before launch, to identify any anomalies and to improve our understanding of the sensor on-orbit calibration performance. E2E testing of the Reflective Solar Bands (RSB) calibration cycle was performed pre-launch for the VIIRS Fight 1 (F1) sensor at the Ball Aerospace facility in Boulder CO in March 2010. VIIRS reflective band calibration cycle is very similar to heritage sensor MODIS in that solar illumination, via a diffuser, is used to correct for temporal variations in the instrument responsivity. Monochromatic light from the NIST T-SIRCUS was used to illuminate both the Earth View (EV), via an integrating sphere, and the Solar Diffuser (SD) view, through a collimator. The collimator illumination was cycled through a series of angles intended to simulate the range of possible angles for which solar radiation will be incident on the solar attenuation screen on-orbit. Ideally, the measured instrument responsivity (defined here as the ratio of the detector response to the at-sensor radiance) should be the same whether the EV or SD view is illuminated. The ratio of the measured responsivities was determined at each collimator angle and wavelength. In addition, the Solar Diffuser Stability Monitor (SDSM), a ratioing radiometer designed to track the temporal variation in the SD BRF by direct comparison to solar radiation, was illuminated by the collimator. The measured SDSM ratio was compared to the predicted ratio. An uncertainty analysis was also performed on both the SD and SDSM calibrations.

  15. Fast Dictionary-Based Reconstruction for Diffusion Spectrum Imaging

    PubMed Central

    Bilgic, Berkin; Chatnuntawech, Itthi; Setsompop, Kawin; Cauley, Stephen F.; Yendiki, Anastasia; Wald, Lawrence L.; Adalsteinsson, Elfar

    2015-01-01

    Diffusion Spectrum Imaging (DSI) reveals detailed local diffusion properties at the expense of substantially long imaging times. It is possible to accelerate acquisition by undersampling in q-space, followed by image reconstruction that exploits prior knowledge on the diffusion probability density functions (pdfs). Previously proposed methods impose this prior in the form of sparsity under wavelet and total variation (TV) transforms, or under adaptive dictionaries that are trained on example datasets to maximize the sparsity of the representation. These compressed sensing (CS) methods require full-brain processing times on the order of hours using Matlab running on a workstation. This work presents two dictionary-based reconstruction techniques that use analytical solutions, and are two orders of magnitude faster than the previously proposed dictionary-based CS approach. The first method generates a dictionary from the training data using Principal Component Analysis (PCA), and performs the reconstruction in the PCA space. The second proposed method applies reconstruction using pseudoinverse with Tikhonov regularization with respect to a dictionary. This dictionary can either be obtained using the K-SVD algorithm, or it can simply be the training dataset of pdfs without any training. All of the proposed methods achieve reconstruction times on the order of seconds per imaging slice, and have reconstruction quality comparable to that of dictionary-based CS algorithm. PMID:23846466

  16. Fast dictionary-based reconstruction for diffusion spectrum imaging.

    PubMed

    Bilgic, Berkin; Chatnuntawech, Itthi; Setsompop, Kawin; Cauley, Stephen F; Yendiki, Anastasia; Wald, Lawrence L; Adalsteinsson, Elfar

    2013-11-01

    Diffusion spectrum imaging reveals detailed local diffusion properties at the expense of substantially long imaging times. It is possible to accelerate acquisition by undersampling in q-space, followed by image reconstruction that exploits prior knowledge on the diffusion probability density functions (pdfs). Previously proposed methods impose this prior in the form of sparsity under wavelet and total variation transforms, or under adaptive dictionaries that are trained on example datasets to maximize the sparsity of the representation. These compressed sensing (CS) methods require full-brain processing times on the order of hours using MATLAB running on a workstation. This work presents two dictionary-based reconstruction techniques that use analytical solutions, and are two orders of magnitude faster than the previously proposed dictionary-based CS approach. The first method generates a dictionary from the training data using principal component analysis (PCA), and performs the reconstruction in the PCA space. The second proposed method applies reconstruction using pseudoinverse with Tikhonov regularization with respect to a dictionary. This dictionary can either be obtained using the K-SVD algorithm, or it can simply be the training dataset of pdfs without any training. All of the proposed methods achieve reconstruction times on the order of seconds per imaging slice, and have reconstruction quality comparable to that of dictionary-based CS algorithm.

  17. SBSS Demonstrator: A design for efficient demonstration of Space-based Space Surveillance end-to-end capabilities

    NASA Astrophysics Data System (ADS)

    Utzmann, Jens; Flohrer, Tim; Schildknecht, Thomas; Wagner, Axel; Silha, Jiri; Willemsen, Philip; Teston, Frederic

    This paper presents the capabilities of a Space-Based Space Surveillance (SBSS) demonstration mission for Space Surveillance and Tracking (SST) based on a micro-satellite platform. The results have been produced in the frame of ESA’s "Assessment Study for Space Based Space Surveillance Demonstration Mission" performed by the Airbus Defence and Space consortium. Space Surveillance and Tracking is part of Space Situational Awareness (SSA) and covers the detection, tracking and cataloguing of space debris and satellites. Derived SST services comprise a catalogue of these man-made objects, collision warning, detection and characterisation of in-orbit fragmentations, sub-catalogue debris characterisation, etc. The assessment of SBSS in a SST system architecture has shown that both an operational SBSS and also already a well-designed space-based demonstrator can provide substantial performance in terms of surveillance and tracking of beyond-LEO objects. Especially the early deployment of a demonstrator, possible by using standard equipment, could boost initial operating capability and create a self-maintained object catalogue. Furthermore, unique statistical information about small-size LEO debris (mm size) can be collected in-situ. Unlike classical technology demonstration missions, the primary goal is the demonstration and optimisation of the functional elements in a complex end-to-end chain (mission planning, observation strategies, data acquisition, processing and fusion, etc.) until the final products can be offered to the users. Also past and current missions by the US (SBV, SBSS) and Canada (Sapphire, NEOSSat) underline the advantages of space-based space surveillance. The presented SBSS system concept takes the ESA SST System Requirements (derived within the ESA SSA Preparatory Program) into account and aims at fulfilling SST core requirements in a stand-alone manner. Additionally, requirments for detection and characterisation of small-sized LEO debris are

  18. Investigating end-to-end accuracy of image guided radiation treatment delivery using a micro-irradiator

    NASA Astrophysics Data System (ADS)

    Rankine, L. J.; Newton, J.; Bache, S. T.; Das, S. K.; Adamovics, J.; Kirsch, D. G.; Oldham, M.

    2013-11-01

    irradiator was verified to be within 0.5 mm (or 1.0 mm for the 5.0 mm cone) and the cone alignment was verified to be within 0.2 mm (or 0.4 mm for the 1.0 mm cone). The PRESAGE®/DMOS system proved valuable for end-to-end verification of small field IGRT capabilities.

  19. SU-E-J-193: Gamma Knife Perfexion End-To-End Testing with a Commercial Stereotactic Phantom.

    PubMed

    Yount, C; Lyons, K; Rahnema, S; McDonald, D; Peng, J; Vanek, K

    2012-06-01

    To investigate the use of the Lucy ® Stereotactic Phantom (Standard Imaging, Inc.) for Gamma Knife Perfexion radiosurgery quality assurance of the imaging, treatment planning, and dose delivery processes. End-to-end testing of the Perfexion and Gamma Plan version 10.1 has not been previously examined in literature. The phantom was imaged using both the CT and T1- and T2-weighted MR sequences used for treatment planning. For imaging, the isocentric volume insert and fiducial markers were positioned within the phantom. Scans were transferred to the Gamma Plan treatment planning system and were evaluated for geometric and fusion accuracy. A plan was created to deliver 12Gy to the 50% isodose line to the 5.25cm(3) volume. During dose delivery, Gafchromic EBT2 film was positioned in the film insert to replicate the position of the target volume. Dose results were analyzed using RIT software (Radiologic Imaging Technology, Inc.). Image fusion integrity was inspected by overlaying the MR and CT markers (5 fiducial markers spaced 5mm apart) and visually examining the resulting volume insert overlap between the three scans. Geometric accuracy was evaluated by contouring three volumes using Gamma Plan contouring tools. Agreement within 1.1%, 6.7% and 12.2% of the actual volumes was seen with the T1-weighted, T2-weighted, and CT images, respectively. The volume-based acquisition and 1mm slice thickness of the T1-weighted sequence resulted in the most accurate measurement. Geometric measurements along two dimensions showed acceptable accuracy for all imaging modalities within 1.6%. Dosimetry results agreed well with the planned dose. The EBT2 film was calibrated for absolute dose measurements using a dose calibration curve for 0.1-30 Gy and the calibration curve was verified to have <3% error above 1Gy. The Lucy phantom allows for comprehensive quality assurance testing of the Gamma Knife Perfexion radiosurgery process. © 2012 American Association of Physicists in Medicine.

  20. WE-G-BRD-08: End-To-End Targeting Accuracy of the Gamma Knife for Trigeminal Neuralgia

    SciTech Connect

    Brezovich, I; Wu, X; Duan, J; Benhabib, S; Huang, M; Shen, S; Cardan, R; Popple, R

    2014-06-15

    Purpose: Current QA procedures verify accuracy of individual equipment parameters, but may not include CT and MRI localizers. This study uses an end-to-end approach to measure the overall targeting errors in individual patients previously treated for trigeminal neuralgia. Methods: The trigeminal nerve is simulated by a 3 mm long, 3.175 mm (1/8 inch) diameter MRI contrast-filled cavity embedded within a PMMA plastic capsule. The capsule is positioned within the head frame such that the cavity position matches the Gamma Knife coordinates of 10 previously treated patients. Gafchromic EBT2 film is placed at the center of the cavity in coronal and sagittal orientations. The films are marked with a pin prick to identify the cavity center. Treatments are planned for delivery with 4 mm collimators using MRI and CT scans acquired with the clinical localizer boxes and acquisition protocols. Coordinates of shots are chosen so that the cavity is centered within the 50% isodose volume. Following irradiation, the films are scanned and analyzed. Targeting errors are defined as the distance between the pin prick and the centroid of the 50% isodose line. Results: Averaged over 10 patient simulations, targeting errors along the x, y and z coordinates (patient left-to-right, posterior-anterior, head-to-foot) were, respectively, −0.060 +/− 0.363, −0.350 +/− 0.253, and 0.364 +/− 0.191 mm when MRI was used for treatment planning. Planning according to CT exhibited generally smaller errors, namely 0.109 +/− 0.167, −0.191 +/− 0.144, and 0.211 +/− 0.94 mm. The largest errors in MRI and CT planned treatments were, respectively, y = −0.761 and x = 0.428 mm. Conclusion: Unless patient motion or stronger MRI image distortion in actual treatments caused additional errors, all patients received the prescribed dose, i.e., the targeted section of the trig±eminal nerve was contained within the 50% isodose surface in all cases.

  1. Pre-Launch End-to-End Testing Plans for the SPAce Readiness Coherent Lidar Experiment (SPARCLE)

    NASA Technical Reports Server (NTRS)

    Kavaya, Michael J.

    1999-01-01

    The SPAce Readiness Coherent Lidar Experiment (SPARCLE) mission was proposed as a low cost technology demonstration mission, using a 2-micron, 100-mJ, 6-Hz, 25-cm, coherent lidar system based on demonstrated technology. SPARCLE was selected in late October 1997 to be NASA's New Millennium Program (NMP) second earth-observing (EO-2) mission. To maximize the success probability of SPARCLE, NASA/MSFC desired expert guidance in the areas of coherent laser radar (CLR) theory, CLR wind measurement, fielding of CLR systems, CLR alignment validation, and space lidar experience. This led to the formation of the NASA/MSFC Coherent Lidar Technology Advisory Team (CLTAT) in December 1997. A threefold purpose for the advisory team was identified as: 1) guidance to the SPARCLE mission, 2) advice regarding the roadmap of post-SPARCLE coherent Doppler wind lidar (CDWL) space missions and the desired matching technology development plan 3, and 3) general coherent lidar theory, simulation, hardware, and experiment information exchange. The current membership of the CLTAT is shown. Membership does not result in any NASA or other funding at this time. We envision the business of the CLTAT to be conducted mostly by email, teleconference, and occasional meetings. The three meetings of the CLTAT to date, in Jan. 1998, July 1998, and Jan. 1999, have all been collocated with previously scheduled meetings of the Working Group on Space-Based Lidar Winds. The meetings have been very productive. Topics discussed include the SPARCLE technology validation plan including pre-launch end-to-end testing, the space-based wind mission roadmap beyond SPARCLE and its implications on the resultant technology development, the current values and proposed future advancement in lidar system efficiency, and the difference between using single-mode fiber optical mixing vs. the traditional free space optical mixing. attitude information from lidar and non-lidar sensors, and pointing knowledge algorithms will

  2. The End-To-End Safety Verification Process Implemented to Ensure Safe Operations of the Columbus Research Module

    NASA Astrophysics Data System (ADS)

    Arndt, J.; Kreimer, J.

    2010-09-01

    The European Space Laboratory COLUMBUS was launched in February 2008 with NASA Space Shuttle Atlantis. Since successful docking and activation this manned laboratory forms part of the International Space Station(ISS). Depending on the objectives of the Mission Increments the on-orbit configuration of the COLUMBUS Module varies with each increment. This paper describes the end-to-end verification which has been implemented to ensure safe operations under the condition of a changing on-orbit configuration. That verification process has to cover not only the configuration changes as foreseen by the Mission Increment planning but also those configuration changes on short notice which become necessary due to near real-time requests initiated by crew or Flight Control, and changes - most challenging since unpredictable - due to on-orbit anomalies. Subject of the safety verification is on one hand the on orbit configuration itself including the hardware and software products, on the other hand the related Ground facilities needed for commanding of and communication to the on-orbit System. But also the operational products, e.g. the procedures prepared for crew and ground control in accordance to increment planning, are subject of the overall safety verification. In order to analyse the on-orbit configuration for potential hazards and to verify the implementation of the related Safety required hazard controls, a hierarchical approach is applied. The key element of the analytical safety integration of the whole COLUMBUS Payload Complement including hardware owned by International Partners is the Integrated Experiment Hazard Assessment(IEHA). The IEHA especially identifies those hazardous scenarios which could potentially arise through physical and operational interaction of experiments. A major challenge is the implementation of a Safety process which owns quite some rigidity in order to provide reliable verification of on-board Safety and which likewise provides enough

  3. Reconstructing Face Image from the Thermal Infrared Spectrum to the Visible Spectrum.

    PubMed

    Kresnaraman, Brahmastro; Deguchi, Daisuke; Takahashi, Tomokazu; Mekada, Yoshito; Ide, Ichiro; Murase, Hiroshi

    2016-04-21

    During the night or in poorly lit areas, thermal cameras are a better choice instead of normal cameras for security surveillance because they do not rely on illumination. A thermal camera is able to detect a person within its view, but identification from only thermal information is not an easy task. The purpose of this paper is to reconstruct the face image of a person from the thermal spectrum to the visible spectrum. After the reconstruction, further image processing can be employed, including identification/recognition. Concretely, we propose a two-step thermal-to-visible-spectrum reconstruction method based on Canonical Correlation Analysis (CCA). The reconstruction is done by utilizing the relationship between images in both thermal infrared and visible spectra obtained by CCA. The whole image is processed in the first step while the second step processes patches in an image. Results show that the proposed method gives satisfying results with the two-step approach and outperforms comparative methods in both quality and recognition evaluations.

  4. Reconstructing Face Image from the Thermal Infrared Spectrum to the Visible Spectrum

    PubMed Central

    Kresnaraman, Brahmastro; Deguchi, Daisuke; Takahashi, Tomokazu; Mekada, Yoshito; Ide, Ichiro; Murase, Hiroshi

    2016-01-01

    During the night or in poorly lit areas, thermal cameras are a better choice instead of normal cameras for security surveillance because they do not rely on illumination. A thermal camera is able to detect a person within its view, but identification from only thermal information is not an easy task. The purpose of this paper is to reconstruct the face image of a person from the thermal spectrum to the visible spectrum. After the reconstruction, further image processing can be employed, including identification/recognition. Concretely, we propose a two-step thermal-to-visible-spectrum reconstruction method based on Canonical Correlation Analysis (CCA). The reconstruction is done by utilizing the relationship between images in both thermal infrared and visible spectra obtained by CCA. The whole image is processed in the first step while the second step processes patches in an image. Results show that the proposed method gives satisfying results with the two-step approach and outperforms comparative methods in both quality and recognition evaluations. PMID:27110781

  5. Reconstruction of Rain Microstructure From Spectrum of Scattering Light

    NASA Astrophysics Data System (ADS)

    Sterlyadkin, V.; Gluschenko, A.

    Night photoregistration of light, scattered by drops had proved that practically all drops oscillate as they fall. As drop oscillation frequency W monotony diminish with drop volume V rise, so different fractions of rain form different parts of spectrum. Thereby it is possible to reconstruct rain microstructure from remote optical measure- ments. In common case the form of spectrum depends not only on drop size distri- bution N(V) but also on oscillation amplitudes function, scattering phase function for oscillating drops and on frequency dependence W(V). The statistical treatment of our field data had shown that average oscillation amplitude rise with drop volume V as , where A is a some constant. This result allows to solve the inverse problem: to re- construct drop size distribution N(V) from the power spectrum of light, scattering by rain. Scattering phase function for nonspherical and oscillating drops was calculated in straight-line approximation. Analysis of optical properties of oscillating water drop had shown some optimal measurement geometry for registration of rain microstruc- ture. For low intensity rains it is reasonable to use the effect of abnormal high modu- lation of light scattered by oscillating drops, which we discovered earlier in laboratory condition and under field measurements. (The effect of abnormal high modulation al- lows us to detect 2-3 mm raindrop deformations from 5 m distance). The results of reconstruction of drop size distributions from spectra of light, scattered by rains are presented and discussed.

  6. Thrombosed giant aneurysm of the distal anterior cerebral artery treated with aneurysm resection and proximal pericallosal artery-callosomarginal artery end-to-end anastomosis: Case report and review of the literature.

    PubMed

    Matsushima, Ken; Kawashima, Masatou; Suzuyama, Kenji; Takase, Yukinori; Takao, Tetsuro; Matsushima, Toshio

    2011-01-01

    Giant distal anterior cerebral artery (DACA) aneurysms are extremely rare, with only 32 cases reported in the literature. Most giant DACA aneurysms have features that make standard neck clipping difficult, and bypass surgery is sometimes required, although this surgery was performed in only three reported cases. This report presents the fourth case treated with bypass surgery. A 69-year-old female presented with an unruptured thrombosed giant DACA aneurysm. She underwent wrapping operation 7 years before, but radiological imaging revealed enlargement of the aneurysm at the left pericallosal artery (PerA)-callosomarginal artery (CMA) junction. Before operation, three different strategies were considered for bypass surgery in case the neck could not be clipped. Aneurysm resection and left proximal PerA-CMA end-to-end anastomosis were successfully performed under intraoperative digital subtraction angiography (DSA) and motor-evoked potential (MEP) monitoring. Most DACA aneurysms are located at the PerA-CMA junction. In some cases, adequate retrograde flow to the distal PerA from the posterior or middle cerebral artery can be expected, making distal PerA reconstruction unnecessary. Moreover, when the distal PerA is cut, proximal PerA-CMA end-to-end anastomosis can be easily performed because of reduced tension in both vessels. We therefore conclude that this strategy should be utilized for treating such patients. We also presented here the effectiveness of intraoperative modalities, such as intraoperative DSA and MEP monitoring, for performing a safe operation.

  7. Reconstruction of a Broadband Spectrum of Alfvenic Fluctuations

    NASA Technical Reports Server (NTRS)

    Vinas, Adolfo F.; Fuentes, Pablo S. M.; Araneda, Jaime A.; Maneva, Yana G.

    2014-01-01

    Alfvenic fluctuations in the solar wind exhibit a high degree of velocities and magnetic field correlations consistent with Alfven waves propagating away and toward the Sun. Two remarkable properties of these fluctuations are the tendencies to have either positive or negative magnetic helicity (-1 less than or equal to sigma(sub m) less than or equal to +1) associated with either left- or right- topological handedness of the fluctuations and to have a constant magnetic field magnitude. This paper provides, for the first time, a theoretical framework for reconstructing both the magnetic and velocity field fluctuations with a divergence-free magnetic field, with any specified power spectral index and normalized magnetic- and cross-helicity spectrum field fluctuations for any plasma species. The spectrum is constructed in the Fourier domain by imposing two conditions-a divergence-free magnetic field and the preservation of the sense of magnetic helicity in both spaces-as well as using Parseval's theorem for the conservation of energy between configuration and Fourier spaces. Applications to the one-dimensional spatial Alfvenic propagation are presented. The theoretical construction is in agreement with typical time series and power spectra properties observed in the solar wind. The theoretical ideas presented in this spectral reconstruction provide a foundation for more realistic simulations of plasma waves, solar wind turbulence, and the propagation of energetic particles in such fluctuating fields.

  8. Investigating end-to-end security in the fifth generation wireless capabilities and IoT extensions

    NASA Astrophysics Data System (ADS)

    Uher, J.; Harper, J.; Mennecke, R. G.; Patton, P.; Farroha, B.

    2016-05-01

    The emerging 5th generation wireless network will be architected and specified to meet the vision of allowing the billions of devices and millions of human users to share spectrum to communicate and deliver services. The expansion of wireless networks from its current role to serve these diverse communities of interest introduces new paradigms that require multi-tiered approaches. The introduction of inherently low security components, like IoT devices, necessitates that critical data be better secured to protect the networks and users. Moreover high-speed communications that are meant to enable the autonomous vehicles require ultra reliable and low latency paths. This research explores security within the proposed new architectures and the cross interconnection of the highly protected assets with low cost/low security components forming the overarching 5th generation wireless infrastructure.

  9. Effective reconstruction of dynamics of medium response spectrum

    NASA Astrophysics Data System (ADS)

    Trofimov, Vyacheslav A.; Varentsova, Svetlana A.

    2008-10-01

    A new algorithm is suggested to visualize the dynamics of medium response spectrum in terahertz diapason by the singly measured set of partially intersected integral characteristics of the signal. The algorithm is based on SVD method and window sliding method. The analysis, we carried out, demonstrates many advantages of the new algorithm in com-parison with the Gabor-Fourier approach, which allows obtaining the dynamics of only one spectral line for one set of measurements. Among which it is necessary to mention the possibility to get the dynamics of many spectral components simultaneously for one set of measurements as well and therefore to get the complete information about the spectrum dynamics. This allows to identify specific materials with known spectral lines and to distinguish materials with similar spectra, which is of great importance for the detection and identification of different chemicals, pharmaceutical substances and explosives. To demonstrate the efficiency of a proposed algorithm, we compare spectrum dynamics of chocolate and soap, which possess the similar spectra. Our investigation shows that their dynamics widely vary in spec-tral lines. The proposed algorithm can be also applied to voice identification and to reconstruction of a laser beam profile with a great number of local maxima. Developed algorithm allows to measure the characteristic time of medium responce. It is very important for various problems of spectroscopy.

  10. Modelling and simulation of the mechanical response of a Dacron graft in the pressurization test and an end-to-end anastomosis.

    PubMed

    Bustos, Claudio A; García-Herrera, Claudio M; Celentano, Diego J

    2016-08-01

    This work presents the modeling and simulation of the mechanical response of a Dacron graft in the pressurization test and its clinical application in the analysis of an end-to-end anastomosis. Both problems are studied via an anisotropic constitutive model that was calibrated by means of previously reported uniaxial tensile tests. First, the simulation of the pressurization test allows the validation of the experimental material characterization that included tests carried out for different levels of axial stretching. Then, the analysis of an end-to-end anastomosis under an idealized geometry is proposed. This case consists in evaluating the mechanical performance of the graft together with the stresses and deformations in the neighborhood of the Dacron with the artery. This research contributes important data to understand the functioning of the graft and the possibility of extending the analysis to complex numerical cases like its insertion in the aortic arch.

  11. End-to-End System Test and Optical Performance Evaluation for the Solar and Heliosphere Observatory (SOHO) Ultraviolet Coronagraph Spectrometer (UVCS)

    NASA Technical Reports Server (NTRS)

    Carosso, Paolo A.; Gardner, Larry D.; Jhabvala, Marzy; Nicolosi, P.

    1997-01-01

    The UVCS is one of the instruments carried by the Solar and Heliospheric Observatory (SOHO), a joint NASA/ESA Spacecraft launched in November 1995. It is designed to perform ultraviolet spectroscopy and visible light polarimetry of the extended solar corona. The primary scientific objectives of the UVCS investigation are to study the physical processes occurring in the extended solar corona, such as: the mechanism of acceleration of the solar wind, the mechanism of coronal plasma heating, the identification of solar wind sources, and the investigation of the plasma properties of the solar wind. The UVCS End-to-End test activities included a comprehensive set of system level functional and optical tests. Although performed under severe schedule constraints, the End-to-End System Test was very successful and served to fully validate the UVCS optical design. All test results showed that the primary scientific objectives of the UVCS Mission were achievable.

  12. End-to-end small bowel anastomosis by temperature controlled CO2 laser soldering and an albumin stent: a feasibility study

    NASA Astrophysics Data System (ADS)

    Simhon, David; Kopelman, Doron; Hashmonai, Moshe; Vasserman, Irena; Dror, Michael; Vasilyev, Tamar; Halpern, Marissa; Kariv, Naam; Katzir, Abraham

    2004-07-01

    Introduction: A feasibility study of small intestinal end to end anastomosis was performed in a rabbit model using temperature controlled CO2 laser system and an albumin stent. Compared with standard suturing or clipping, this method does not introduce foreign materials to the repaired wound and therefore, may lead to better and faster wound healing of the anastomotic site. Methods: Transected rabbits small intestines were either laser soldered using 47% bovine serum albumin and intraluminal albumin stent or served as controls in which conventional continuous two-layer end to end anastomosis was performed manually. The integrity of the anastomosis was investigated at the 14th postoperative day. Results: Postoperative course in both treatments was uneventful. The sutured group presented signs of partial bowel obstruction. Macroscopically, no signs of intraluminal fluid leakage were observed in both treatments. Yet, laser soldered intestinal anastomoses demonstrated significant superiority with respect to adhesions and narrowing of the intestinal lumen. Serial histological examinations revealed better wound healing characteristics of the laser soldered anastomotic site. Conclusion: Laser soldering of intestinal end to end anastomosis provide a faster surgical procedure, compared to standard suture technique, with better wound healing results. It is expected that this technique may be adopted in the future for minimal invasive surgeries.

  13. Dispersion compensation for FD-OCT using spectrum reconstruction.

    PubMed

    Wang, Yi; Chen, Xiaodong; Chen, Xiaojie; Yu, Daoyin

    2015-01-01

    In OCT system, the chromatic dispersion of sample decreases the resolution and increases the depth misplacement. The developed numerical dispersion compensation techniques usually do not consider the higher order dispersion and time-consuming. We proposed a numerical compensation technique for correcting depth error and resolution deterioration in Fourier domain optical coherence tomography (FD-OCT). Firstly, the rough depth of each scatter in multilayer sample is estimated through magnification curve. Then the depth of a scatter is iterated to minimum the residual of this scatter in the time domain. At last, the spectrum of the scatter is reconstructed and dispersion can be compensated with the tracked depth. The results show that the depth error is corrected to less than resolution level and the resolution is corrected to nearly ideal. The technique proposed can provide precise sample tomography, thus enhancing the understanding of sample character.

  14. Reconstructing the primordial power spectrum from the CMB

    NASA Astrophysics Data System (ADS)

    Gauthier, Christopher; Bucher, Martin

    2012-10-01

    We propose a straightforward and model independent methodology for characterizing the sensitivity of CMB and other experiments to wiggles, irregularities, and features in the primordial power spectrum. Assuming that the primordial cosmological perturbations are adiabatic, we present a function space generalization of the usual Fisher matrix formalism applied to a CMB experiment resembling Planck with and without ancillary data. This work is closely related to other work on recovering the inflationary potential and exploring specific models of non-minimal, or perhaps baroque, primordial power spectra. The approach adopted here, however, most directly expresses what the data is really telling us. We explore in detail the structure of the available information and quantify exactly what features can be reconstructed and at what statistical significance.

  15. Differentiated CW Policy and Strict Priority Policy for Location-Independent End-to-End Delay in Multi-Hop Wireless Mesh Networks

    NASA Astrophysics Data System (ADS)

    Bae, Yun Han; Kim, Kyung Jae; Park, Jin Soo; Choi, Bong Dae

    We investigate delay analysis of multi-hop wireless mesh network (WMN) where nodes have multi-channel and multiple transceivers to increase the network capacity. The functionality of the multi-channel and multiple transceivers allows the whole WMN to be decomposed into disjoint zones in such a way that i) nodes in a zone are within one-hop distance, and relay node and end nodes with different CWmins contend to access the channel based on IEEE 802.11e EDCA, ii) different channels are assigned to neighbor zones to prevent the hidden node problem, iii) relay nodes can transmit and receive the packets simultaneously by multi-channel and multiple transceivers. With this decomposition of the network, we focus on the delay at a single zone and then the end-to-end delay can be obtained as the sum of zone-delays. In order to have the location-independent end-to-end delay to the gateway regardless of source nodes' locations, we propose two packet management schemes, called the differentiated CW policy and the strict priority policy, at each relay node where relay packets with longer hop count are buffered in higher priority queues according to their experienced hop count. For the differentiated CW policy, a relay node adopts the functionality of IEEE 802.11e EDCA where a higher priority queue has a shorter minimum contention window. We model a typical zone as a one-hop IEEE 802.11e EDCA network under non-saturation condition where priority queues have different packet arrival rates and different minimum contention window sizes. First, we find the PGF (probability generating function) of the HoL-delay of packets at priority queues in a zone. Second, by modeling each queue as M/G/1 queue with the HoL-delay as a service time, we obtain the packet delay (the sum of the queueing delay and the HoL-delay) of each priority queue in a zone. Third, the average end-to-end delay of packet generated at end node in each zone is obtained by summing up the packet delays at each zone. For

  16. Planning for Mars Sample Return: Results from the MEPAG Mars Sample Return End-to-End International Science Analysis Group (E2E-iSAG)

    NASA Astrophysics Data System (ADS)

    McLennan, S. M.; Sephton, M.; Mepag E2E-Isag

    2011-12-01

    The National Research Council 2011 Planetary Decadal Survey (2013-2022) placed beginning a Mars sample return campaign (MSR) as the top priority for large Flagship missions in the coming decade. Recent developments in NASA-ESA collaborations and Decadal Survey recommendations indicate MSR likely will be an international effort. A joint ESA-NASA 2018 rover (combining the previously proposed ExoMars and MAX-C missions), designed, in part, to collect and cache samples, would thus represent the first of a 3-mission MSR campaign. The End-to-End International Science Analysis Group (E2E-iSAG) was chartered by MEPAG in August 2010 to develop and prioritize MSR science objectives and investigate implications of these objectives for defining the highest priority sample types, landing site selection criteria (and identification of reference landing sites to support engineering planning), requirements for in situ characterization on Mars to support sample selection, and priorities/strategies for returned sample analyses to determine sample sizes and numbers that would meet the objectives. MEPAG approved the E2E-iSAG report in June 2011. Science objectives, summarized in priority order, are: (1) critically assess any evidence for past life or its chemical precursors, and place constraints on past habitability and potential for preservation of signs of life, (2) quantitatively constrain age, context and processes of accretion, early differentiation and magmatic and magnetic history, (3) reconstruct history of surface and near-surface processes involving water, (4) constrain magnitude, nature, timing, and origin of past climate change, (5) assess potential environmental hazards to future human exploration, (6) assess history and significance of surface modifying processes, (7) constrain origin and evolution of the Martian atmosphere, (8) evaluate potential critical resources for future human explorers. All returned samples also would be fully evaluated for extant life as a

  17. An end-to-end system in support of a broad scope of GOES-R sensor and data processing study

    NASA Astrophysics Data System (ADS)

    Huang, Hung-Lung

    2005-08-01

    The mission of NOAA's Geostationary Operational Environmental Satellite System (GOES) R series satellites, in the 2012 time frame, is to provide continuous, near real-time meteorological, oceanographic, solar, and space environment data that supports NOAA's strategic mission goals. It presents an exciting opportunity to explore new instruments, satellite designs, and system architectures utilizing new communication and instrument technologies in order to meet the ever-increasing demands made of Earth observation systems by national agencies and end users alike. The GOES-R sensor suite includes a 16 spectral band Advanced Baseline Imager (ABI), an approximately 1500 high spectral resolution band Hyperspectral Environmental Suite (HES), plus other sensors designed to detect lightning and to explore the ocean, solar and space environment. The Cooperative Institute for Meteorological Satellite Studies (CIMSS) as part of the Space Science and Engineering Center (SSEC) of the University of Wisconsin-Madison, the long time partner of NOAA, has developed the first operational end-to-end processing system for GOES. Based on this heritage, and with recent support from the NASA/NOAA Geosynchrous Imaging FTS (GIFTS) project, the Navy's Multiple University Research Initiative (MURI), and NOAA's GOES-R Risk Reduction program, SSEC has built a near-complete end-to-end system that is capable of simulating sensor measurements from top of atmosphere radiances, raw sensor data (level 0) through calibrated and navigated sensor physical measurements (level 1) to the processed products (level 2). In this paper, the SSEC Hyperspectral Imaging and Sounding Simulator and Processor (HISSP) will be presented in detail. HISSP is capable of demonstrating most of the processing functions such as data compression/decompression, sensor calibration, data processing, algorithm development, and product generation. In summary, HISSP is an end-to-end system designed to support both government and

  18. The Gamma-ray Cherenkov Telescope, an end-to end Schwarzschild-Couder telescope prototype proposed for the Cherenkov Telescope Array

    NASA Astrophysics Data System (ADS)

    Dournaux, J. L.; Abchiche, A.; Allan, D.; Amans, J. P.; Armstrong, T. P.; Balzer, A.; Berge, D.; Boisson, C.; Bousquet, J.-J.; Brown, A. M.; Bryan, M.; Buchholtz, G.; Chadwick, P. M.; Costantini, H.; Cotter, G.; Dangeon, L.; Daniel, M. K.; De Franco, A.; De Frondat, F.; Dumas, D.; Ernenwein, J. P.; Fasola, G.; Funk, S.; Gironnet, J.; Graham, J. A.; Greenshaw, T.; Hameau, B.; Hervet, O.; Hidaka, N.; Hinton, J. A.; Huet, J. M.; Jégouzo, I.; Jogler, T.; Kawashima, T.; Kraush, M.; Lapington, J. S.; Laporte, P.; Lefaucheur, J.; Markoff, S.; Melse, T.; Mohrmann, L.; Molyneux, P.; Nolan, S. J.; Okumura, A.; Osborne, J. P.; Parsons, R. D.; Rosen, S.; Ross, D.; Rowell, G.; Rulten, C. B.; Sato, Y.; Sayède, F.; Schmoll, J.; Schoorlemmer, H.; Servillat, M.; Sol, H.; Stamatescu, V.; Stephan, M.; Stuik, R.; Sykes, J.; Tajima, H.; Thornhill, J.; Tibaldo, L.; Trichard, C.; Vink, J.; Watson, J. J.; White, R.; Yamane, N.; Zech, A.; Zink, A.

    2016-08-01

    The GCT (Gamma-ray Cherenkov Telescope) is a dual-mirror prototype of Small-Sized-Telescopes proposed for the Cherenkov Telescope Array (CTA) and made by an Australian-Dutch-French-German-Indian-Japanese-UK-US consortium. The integration of this end-to-end telescope was achieved in 2015. On-site tests and measurements of the first Cherenkov images on the night sky began on November 2015. This contribution describes the telescope and plans for the pre-production and a large scale production within CTA.

  19. Complications of rectal anastomoses with end-to-end anastomosis (EEA) stapling instrument. Clinical and radiological leak rates and some practical hints.

    PubMed Central

    Dorricott, N. J.; Baddeley, R. M.; Keighley, M. R.; Lee, J.; Oates, G. D.; Alexander-Williams, J.

    1982-01-01

    The complications and results of rectal anastomoses carried out with the end-to-end anastomosis (EEA) stapling instrument on 50 patients by 5 consultant surgeons are recorded. There was a clinical leakage rate of 6% and a radiological leakage rate of 20% assessed by water-soluble contrast enema. The technique has advantages compared with hand-suture by allowing low anastomoses and preservation of sphincters and is accompanied by an acceptably low leakage rate. Despite the cost of disposable cartridges these advantages make the technique economical because of the avoidance of colostomies and reduction in hospital stay. Images FIG. 1 FIG. 2 PMID:7044253

  20. On-Orbit Performance Verification and End-To-End Characterization of the TDRS-H Ka-band Communications Payload

    NASA Technical Reports Server (NTRS)

    Toral, Marco; Wesdock, John; Kassa, Abby; Pogorelc, Patsy; Jenkens, Robert (Technical Monitor)

    2002-01-01

    In June 2000, NASA launched the first of three next generation Tracking and Data Relay Satellites (TDRS-H) equipped with a Ka-band forward and return service capability. This Ka-band service supports forward data rates of up to 25 Mb/sec using the 22.55-23.55 GHz space-to-space allocation. Return services are supported via channel bandwidths of 225 and 650 MHz for data rates up to at least 800 Mb/sec using the 25.25 - 27.5 GHz space-to-space allocation. As part of NASA's acceptance of the TDRS-H spacecraft, an extensive on-orbit calibration, verification and characterization effort was performed to ensure that on-orbit spacecraft performance is within specified limits. This process verified the compliance of the Ka-band communications payload with all performance specifications, and demonstrated an end-to-end Ka-band service capability. This paper summarizes the results of the TDRS-H Ka-band communications payload on-orbit performance verification and end-to-end service characterization. Performance parameters addressed include antenna gain pattern, antenna Gain-to-System Noise Temperature (G/T), Effective Isotropically Radiated Power (EIRP), antenna pointing accuracy, frequency tunability, channel magnitude response, and Ka-band service Bit-Error-Rate (BER) performance.

  1. On-Orbit Performance Verification and End-to-End Characterization of the TDRS-H Ka-Band Communications Payload

    NASA Technical Reports Server (NTRS)

    Toral, Marco; Wesdock, John; Kassa, Abby; Pogorelc, Patsy; Jenkens, Robert (Technical Monitor)

    2002-01-01

    In June 2000, NASA launched the first of three next generation Tracking and Data Relay Satellites (TDRS-H) equipped with a Ka-band forward and return service capability. This Ka-band service supports forward data rates up to 25 Mb/sec using the 22.55 - 23.55 GHz space-to-space allocation. Return services are supported via channel bandwidths of 225 and 650 MHz for data rates up to 800 Mb/sec (QPSK) using the 25.25 - 27.5 GHz space-to-space allocation. As part of NASA's acceptance of the TDRS-H spacecraft, an extensive on-orbit calibration, verification and characterization effort was performed to ensure that on-orbit spacecraft performance is within specified limits. This process verified the compliance of the Ka-band communications payload with all performance specifications and demonstrated an end-to-end Ka-band service capability. This paper summarizes the results of the TDRS-H Ka-band communications payload on-orbit performance verification and end-to-end service characterization. Performance parameters addressed include Effective Isotropically Radiated Power (EIRP), antenna Gain-to-System Noise Temperature (G/T), antenna gain pattern, frequency tunability and accuracy, channel magnitude response, and Ka-band service Bit-Error-Rate (BER) performance.

  2. Interoperable End-to-End Remote Patient Monitoring Platform based on IEEE 11073 PHD and ZigBee Health Care Profile.

    PubMed

    Clarke, Malcolm; de Folter, Joost; Verma, Vivek; Gokalp, Hulya

    2017-08-07

    This paper describes the implementation of an end-to-end remote monitoring platform based on the IEEE 11073 standards for Personal Health Devices (PHD). It provides an overview of the concepts and approaches and describes how the standard has been optimized for small devices with limited resources of processor, memory and power and that use short range wireless technology. It explains aspects of IEEE 11073, including the Domain Information Model, state model and nomenclature, and how these support its plug-and-play architecture. It shows how these aspects underpin a much larger eco-system of interoperable devices and systems that include IHE PCD-01, HL7 and BlueTooth LE medical devices, and the relationship to the Continua Guidelines, advocating the adoption of data standards and nomenclature to support semantic interoperability between health and ambient assisted living (AAL) in future platforms. The paper further describes the adaptions that have been made in order to implement the standard on the ZigBee Health Care Profile and the experiences of implementing an end-to-end platform that has been deployed to frail elderly patients with chronic disease(s) and patients with diabetes.

  3. Comparison of Peripheral Nerve Regeneration with Side-to-side, End-to-side, and End-to-end Repairs: An Experimental Study

    PubMed Central

    Göransson, Harry; Taskinen, Hanna-Stiina; Paavilainen, Pasi; Vahlberg, Tero; Röyttä, Matias

    2016-01-01

    Background: The present study was conducted to find out a tool to enable improved functional recovery with proximal nerve injury. In this experimental study, nerve regeneration was compared between side-to-side (STS), end-to-side (ETS), and end-to-end repairs. Methods: The walk track analysis was used as an outcome of functional recovery. Nerve regeneration was studied with morphometry and histology 6 or 26 weeks postoperatively. Results: All 3 repair techniques showed regeneration of the nerve. From 12 weeks onward, the functional results of the 3 intervention groups were significantly better compared with the unrepaired control group. End-to-end repair was significantly better when compared with the STS and ETS groups. At 26 weeks, the functional and morphometric results and histologic findings did not differ between the STS and ETS groups. The functional results correlated with the morphometric findings in all groups. Conclusions: STS neurorrhaphy showed nerve regeneration, and the end results did not differ from clinically widely used ETS repair. Further studies are warranted to optimize the neurorrhaphy technique and examine possible applications of STS repair in peripheral nerve surgery. PMID:28293523

  4. AAB-sequence living radical chain copolymerization of naturally occurring limonene with maleimide: an end-to-end sequence-regulated copolymer.

    PubMed

    Satoh, Kotaro; Matsuda, Masaru; Nagai, Kanji; Kamigaito, Masami

    2010-07-28

    Sequence control in chain-growth polymerization is still one of the most challenging topics in synthetic polymer chemistry in contrast to natural macromolecules with completely sequence-regulated structures like proteins and DNA. Here, we report the quantitative and highly selective 1:2 sequence-regulated radical copolymerization of naturally occurring (+)-d-limonene (L) and a maleimide (M) in fluoroalcohol giving chiral copolymers with high glass transition temperatures (220-250 degrees C) originating from the specific rigid cyclic structures of the monomers. Furthermore, the combination with a reversible addition-fragmentation chain transfer (RAFT) agent (C-S) via the controlled/living radical polymerization resulted in end-to-end sequence-regulated copolymers [C-(M-M-L)(n)-M-S] with both highly sequenced chain ends and main-chain repeating units as well as controlled molecular weights.

  5. Demonstration of a fully-coupled end-to-end model for small pelagic fish using sardine and anchovy in the California Current

    NASA Astrophysics Data System (ADS)

    Rose, Kenneth A.; Fiechter, Jerome; Curchitser, Enrique N.; Hedstrom, Kate; Bernal, Miguel; Creekmore, Sean; Haynie, Alan; Ito, Shin-ichi; Lluch-Cota, Salvador; Megrey, Bernard A.; Edwards, Chris A.; Checkley, Dave; Koslow, Tony; McClatchie, Sam; Werner, Francisco; MacCall, Alec; Agostini, Vera

    2015-11-01

    We describe and document an end-to-end model of anchovy and sardine population dynamics in the California Current as a proof of principle that such coupled models can be developed and implemented. The end-to-end model is 3-dimensional, time-varying, and multispecies, and consists of four coupled submodels: hydrodynamics, Eulerian nutrient-phytoplankton-zooplankton (NPZ), an individual-based full life cycle anchovy and sardine submodel, and an agent-based fishing fleet submodel. A predator roughly mimicking albacore was included as individuals that consumed anchovy and sardine. All submodels were coded within the ROMS open-source community model, and used the same resolution spatial grid and were all solved simultaneously to allow for possible feedbacks among the submodels. We used a super-individual approach and solved the coupled models on a distributed memory parallel computer, both of which created challenging but resolvable bookkeeping challenges. The anchovy and sardine growth, mortality, reproduction, and movement, and the fishing fleet submodel, were each calibrated using simplified grids before being inserted into the full end-to-end model. An historical simulation of 1959-2008 was performed, and the latter 45 years analyzed. Sea surface height (SSH) and sea surface temperature (SST) for the historical simulation showed strong horizontal gradients and multi-year scale temporal oscillations related to various climate indices (PDO, NPGO), and both showed responses to ENSO variability. Simulated total phytoplankton was lower during strong El Nino events and higher for the strong 1999 La Nina event. The three zooplankton groups generally corresponded to the spatial and temporal variation in simulated total phytoplankton. Simulated biomasses of anchovy and sardine were within the historical range of observed biomasses but predicted biomasses showed much less inter-annual variation. Anomalies of annual biomasses of anchovy and sardine showed a switch in the mid

  6. Mixed integer nonlinear programming model of wireless pricing scheme with QoS attribute of bandwidth and end-to-end delay

    NASA Astrophysics Data System (ADS)

    Irmeilyana, Puspita, Fitri Maya; Indrawati

    2016-02-01

    The pricing for wireless networks is developed by considering linearity factors, elasticity price and price factors. Mixed Integer Nonlinear Programming of wireless pricing model is proposed as the nonlinear programming problem that can be solved optimally using LINGO 13.0. The solutions are expected to give some information about the connections between the acceptance factor and the price. Previous model worked on the model that focuses on bandwidth as the QoS attribute. The models attempt to maximize the total price for a connection based on QoS parameter. The QoS attributes used will be the bandwidth and the end to end delay that affect the traffic. The maximum goal to maximum price is achieved when the provider determine the requirement for the increment or decrement of price change due to QoS change and amount of QoS value.

  7. End-to-End Study of the Transfer of Energy from Magnetosheath Ion Precipitation to the Ionospheric Cusp and Resulting Ion Outflow to the Magnetosphere

    NASA Technical Reports Server (NTRS)

    Coffey, Victoria; Chandler, Michael; Singh, Nagendra; Avanov, Levon

    2003-01-01

    We will show results from an end-to-end study of the energy transfer from injected magnetosheath plasmas to the near-Earth magnetospheric and ionospheric plasmas and the resulting ion outflow to the magnetosphere. This study includes modeling of the evolution of the magnetosheath precipitation in the cusp using a kinetic code with a realistic magnetic field configuration. These evolved, highly non-Maxwellian distributions are used as input to a 2D PIC code to analyze the resulting wave generation. The wave analysis is used in the kinetic code as input to the cold ionospheric ions to study the transfer of energy to these ions and their outflow to the magnetosphere. Observations from the Thermal Ion Dynamics Experiment (TIDE) and other instruments on the Polar Spacecraft will be compared to the modeling.

  8. End-to-End Study of the Transfer of Energy from Magnetosheath Ion Precipitation to the Ionospheric Cusp and Resulting Ion Outflow to the Magnetosphere

    NASA Technical Reports Server (NTRS)

    Coffey, Victoria; Chandler, Michael; Singh, Nagendra; Avanov, Levon

    2003-01-01

    We will show results from an end-to-end study of the energy transfer from injected magnetosheath plasmas to the near-Earth magnetospheric and ionospheric plasmas and the resulting ion outflow to the magnetosphere. This study includes modeling of the evolution of the magnetosheath precipitation in the cusp using a kinetic code with a realistic magnetic field configuration. These evolved, highly non-Maxwellian distributions are used as input to a 2D PIC code to analyze the resulting wave generation. The wave analysis is used in the kinetic code as input to the cold ionospheric ions to study the transfer of energy to these ions and their outflow to the magnetosphere. Observations from the Thermal Ion Dynamics Experiment (TIDE) and other instruments on the Polar Spacecraft will be compared to the modeling.

  9. A statistical iterative reconstruction framework for dual energy computed tomography without knowing tube spectrum

    NASA Astrophysics Data System (ADS)

    Chang, Shaojie; Mou, Xuanqin

    2016-09-01

    Dual energy computed tomography (DECT) has significant impacts on material characterization, bone mineral density inspection, nondestructive evaluation and so on. In spite of great progress has been made recently on reconstruction algorithms for DECT, there still exist two main problems: 1) For polyenergetic X-ray source, the tube spectrum needed in reconstruction is not always available. 2) The reconstructed image of DECT is very sensitive to noise which demands special noise suppression strategy in reconstruction algorithm design. In this paper, we propose a novel method for DECT reconstruction that reconstructs tube spectrum from projection data and suppresses image noise by introducing l1-norm based regularization into statistical reconstruction for polychromatic DECT. The contribution of this work is twofold. 1) A three parameters model is devised to represent spectrum of ployenergetic X-ray source. And the parameters can be estimated from projection data by solving an optimization problem. 2) With the estimated tube spectrum, we propose a computation framework of l1-norm regularization based statistical iterative reconstruction for polychromatic DECT. Simulation experiments with two phantoms were conducted to evaluate the proposed method. Experimental results demonstrate the accuracy and robustness of the spectrum model in terms of that comparable reconstruction image quality can be achieved with the estimated and ideal spectrum, and validate that the proposed method works with attractive performance in terms of accuracy of reconstructed image. The root mean square error (RMSE) between the reconstructed image and the ground truth image are 7.648 × 10-4 and 2.687 x 10-4 for the two phantoms, respectively.

  10. The role of environmental controls in determining sardine and anchovy population cycles in the California Current: Analysis of an end-to-end model

    NASA Astrophysics Data System (ADS)

    Fiechter, Jerome; Rose, Kenneth A.; Curchitser, Enrique N.; Hedstrom, Katherine S.

    2015-11-01

    Sardine and anchovy are two forage species of particular interest because of their low-frequency cycles in adult abundance in boundary current regions, combined with a commercially relevant contribution to the global marine food catch. While several hypotheses have been put forth to explain decadal shifts in sardine and anchovy populations, a mechanistic basis for how the physics, biogeochemistry, and biology combine to produce patterns of synchronous variability across widely separated systems has remained elusive. The present study uses a 50-year (1959-2008) simulation of a fully coupled end-to-end ecosystem model configured for sardine and anchovy in the California Current System to investigate how environmental processes control their population dynamics. The results illustrate that slightly different temperature and diet preferences can lead to significantly different responses to environmental variability. Simulated adult population fluctuations are associated with age-1 growth (via age-2 egg production) and prey availability for anchovy, while they depend primarily on age-0 survival and temperature for sardine. The analysis also hints at potential linkages to known modes of climate variability, whereby changes in adult abundance are related to ENSO for anchovy and to the PDO for sardine. The connection to the PDO and ENSO is consistent with modes of interannual and decadal variability that would alternatively favor anchovy during years of cooler temperatures and higher prey availability, and sardine during years of warmer temperatures and lower prey availability. While the end-to-end ecosystem model provides valuable insight on potential relationships between environmental conditions and sardine and anchovy population dynamics, understanding the complex interplay, and potential lags, between the full array of processes controlling their abundances in the California Current System remains an on-going challenge.

  11. The application of MUSIC algorithm in spectrum reconstruction and interferogram processing

    NASA Astrophysics Data System (ADS)

    Jian, Xiaohua; Zhang, Chunmin; Zhao, Baochang; Zhu, Baohui

    2008-05-01

    Three different methods of spectrum reproduction and interferogram processing are discussed and contrasted in this paper. Especially, the nonparametric model of MUSIC (multiple signal classification) algorithm is firstly brought into the practical spectrum reconstruction processing. The experimental results prove that this method has immensely improved the resolution of reproduced spectrum, and provided a better math model for super advanced resolving power in spectrum reconstruction. The usefulness and simplicity of the technique will lead the interference imaging spectrometers to almost every field into which the spectroscopy has ventured and into some where it has not gone before.

  12. Imaging and dosimetric errors in 4D PET/CT-guided radiotherapy from patient-specific respiratory patterns: a dynamic motion phantom end-to-end study

    NASA Astrophysics Data System (ADS)

    Bowen, S. R.; Nyflot, M. J.; Herrmann, C.; Groh, C. M.; Meyer, J.; Wollenweber, S. D.; Stearns, C. W.; Kinahan, P. E.; Sandison, G. A.

    2015-05-01

    Effective positron emission tomography / computed tomography (PET/CT) guidance in radiotherapy of lung cancer requires estimation and mitigation of errors due to respiratory motion. An end-to-end workflow was developed to measure patient-specific motion-induced uncertainties in imaging, treatment planning, and radiation delivery with respiratory motion phantoms and dosimeters. A custom torso phantom with inserts mimicking normal lung tissue and lung lesion was filled with [18F]FDG. The lung lesion insert was driven by six different patient-specific respiratory patterns or kept stationary. PET/CT images were acquired under motionless ground truth, tidal breathing motion-averaged (3D), and respiratory phase-correlated (4D) conditions. Target volumes were estimated by standardized uptake value (SUV) thresholds that accurately defined the ground-truth lesion volume. Non-uniform dose-painting plans using volumetrically modulated arc therapy were optimized for fixed normal lung and spinal cord objectives and variable PET-based target objectives. Resulting plans were delivered to a cylindrical diode array at rest, in motion on a platform driven by the same respiratory patterns (3D), or motion-compensated by a robotic couch with an infrared camera tracking system (4D). Errors were estimated relative to the static ground truth condition for mean target-to-background (T/Bmean) ratios, target volumes, planned equivalent uniform target doses, and 2%-2 mm gamma delivery passing rates. Relative to motionless ground truth conditions, PET/CT imaging errors were on the order of 10-20%, treatment planning errors were 5-10%, and treatment delivery errors were 5-30% without motion compensation. Errors from residual motion following compensation methods were reduced to 5-10% in PET/CT imaging, <5% in treatment planning, and <2% in treatment delivery. We have demonstrated that estimation of respiratory motion uncertainty and its propagation from PET/CT imaging to RT planning, and RT

  13. Imaging and dosimetric errors in 4D PET/CT-guided radiotherapy from patient-specific respiratory patterns: a dynamic motion phantom end-to-end study.

    PubMed

    Bowen, S R; Nyflot, M J; Herrmann, C; Groh, C M; Meyer, J; Wollenweber, S D; Stearns, C W; Kinahan, P E; Sandison, G A

    2015-05-07

    Effective positron emission tomography / computed tomography (PET/CT) guidance in radiotherapy of lung cancer requires estimation and mitigation of errors due to respiratory motion. An end-to-end workflow was developed to measure patient-specific motion-induced uncertainties in imaging, treatment planning, and radiation delivery with respiratory motion phantoms and dosimeters. A custom torso phantom with inserts mimicking normal lung tissue and lung lesion was filled with [(18)F]FDG. The lung lesion insert was driven by six different patient-specific respiratory patterns or kept stationary. PET/CT images were acquired under motionless ground truth, tidal breathing motion-averaged (3D), and respiratory phase-correlated (4D) conditions. Target volumes were estimated by standardized uptake value (SUV) thresholds that accurately defined the ground-truth lesion volume. Non-uniform dose-painting plans using volumetrically modulated arc therapy were optimized for fixed normal lung and spinal cord objectives and variable PET-based target objectives. Resulting plans were delivered to a cylindrical diode array at rest, in motion on a platform driven by the same respiratory patterns (3D), or motion-compensated by a robotic couch with an infrared camera tracking system (4D). Errors were estimated relative to the static ground truth condition for mean target-to-background (T/Bmean) ratios, target volumes, planned equivalent uniform target doses, and 2%-2 mm gamma delivery passing rates. Relative to motionless ground truth conditions, PET/CT imaging errors were on the order of 10-20%, treatment planning errors were 5-10%, and treatment delivery errors were 5-30% without motion compensation. Errors from residual motion following compensation methods were reduced to 5-10% in PET/CT imaging, <5% in treatment planning, and <2% in treatment delivery. We have demonstrated that estimation of respiratory motion uncertainty and its propagation from PET/CT imaging to RT planning, and

  14. Imaging and dosimetric errors in 4D PET/CT-guided radiotherapy from patient-specific respiratory patterns: a dynamic motion phantom end-to-end study

    PubMed Central

    Bowen, S R; Nyflot, M J; Hermann, C; Groh, C; Meyer, J; Wollenweber, S D; Stearns, C W; Kinahan, P E; Sandison, G A

    2015-01-01

    Effective positron emission tomography/computed tomography (PET/CT) guidance in radiotherapy of lung cancer requires estimation and mitigation of errors due to respiratory motion. An end-to-end workflow was developed to measure patient-specific motion-induced uncertainties in imaging, treatment planning, and radiation delivery with respiratory motion phantoms and dosimeters. A custom torso phantom with inserts mimicking normal lung tissue and lung lesion was filled with [18F]FDG. The lung lesion insert was driven by 6 different patient-specific respiratory patterns or kept stationary. PET/CT images were acquired under motionless ground truth, tidal breathing motion-averaged (3D), and respiratory phase-correlated (4D) conditions. Target volumes were estimated by standardized uptake value (SUV) thresholds that accurately defined the ground-truth lesion volume. Non-uniform dose-painting plans using volumetrically modulated arc therapy (VMAT) were optimized for fixed normal lung and spinal cord objectives and variable PET-based target objectives. Resulting plans were delivered to a cylindrical diode array at rest, in motion on a platform driven by the same respiratory patterns (3D), or motion-compensated by a robotic couch with an infrared camera tracking system (4D). Errors were estimated relative to the static ground truth condition for mean target-to-background (T/Bmean) ratios, target volumes, planned equivalent uniform target doses (EUD), and 2%-2mm gamma delivery passing rates. Relative to motionless ground truth conditions, PET/CT imaging errors were on the order of 10–20%, treatment planning errors were 5–10%, and treatment delivery errors were 5–30% without motion compensation. Errors from residual motion following compensation methods were reduced to 5–10% in PET/CT imaging, < 5% in treatment planning, and < 2% in treatment delivery. We have demonstrated that estimation of respiratory motion uncertainty and its propagation from PET/CT imaging to RT

  15. Reconstruction of the electron spectrum in a metal hydrogen sulfide

    NASA Astrophysics Data System (ADS)

    Kudryashov, N. A.; Kutukov, A. A.; Mazur, E. A.

    2017-01-01

    Generalized Eliashberg theory of the normal properties of a metal electron-phonon system with a non constant electron density of states has been used to study the effect of the conduction band reconstruction. The electron density of states of the metallic phase of the hydrogen sulfide renormalized by the strong electron-phonon coupling at a pressure of P = 225 GPa has been calculated. It has been found that the reconstructed conduction band contains a series of narrow energy pockets.

  16. Shared path protection through reconstructing sharable bandwidth based on spectrum segmentation for elastic optical networks

    NASA Astrophysics Data System (ADS)

    Liu, Huanlin; Zhang, Mingjia; Yi, Pengfei; Chen, Yong

    2016-12-01

    In order to address the problems of spectrum fragmentation and low sharing degree of spectrum resources in survivable elastic optical networks, an improved algorithm, called shared path protection by reconstructing sharable bandwidth based on spectrum segmentation (SPP-RSB-SS), is proposed in the paper. In the SPP-RSB-SS algorithm, for reducing the number of spectrum fragmentations and improving the success rate of spectrum allocation, the whole spectrum resource is partitioned into several spectrum segments. And each spectrum segment is allocated to the requests with the same bandwidth requirement in priority. Meanwhile, the protection path with higher spectrum sharing degree is selected through optimizing the link cost function and reconstructing sharable bandwidth. Hence, the protection path can maximize the sharable spectrum usage among multiple protection paths. The simulation results indicate that the SPP-RSB-SS algorithm can increase the sharing degree of protection spectrum effectively. Furthermore, the SPP-RSB-SS algorithm can enhance the spectrum utilization, and reduce the bandwidth blocking probability significantly.

  17. End-to-end ureteral anastomosis and double-pigtail ureteral stent placement for treatment of iatrogenic ureteral trauma in two dogs.

    PubMed

    Wormser, Chloe; Clarke, Dana L; Aronson, Lillian R

    2015-07-01

    A 6-month-old spayed female Soft-Coated Wheaten Terrier and 8-month-old spayed female Shih Tzu were referred because of complications related to inadvertent ureteral ligation and transection during recent ovariohysterectomy. The Soft-Coated Wheaten Terrier had a 2-day history of stranguria and polyuria that began after ovariohysterectomy. Initial examination findings were unremarkable with the exception of high rectal temperature. The Shih Tzu had a 10-day history of pyrexia, vomiting, diarrhea, and stranguria that began after ovariohysterectomy. On examination, the dog had signs of depression; clinicopathologic tests revealed hypoalbuminemia, neutrophilia, lymphocytosis, and monocytosis. Abdominal ultrasonography was performed for both dogs, revealing severe unilateral pyelectasia and hydroureter (proximal portion). Both dogs underwent exploratory celiotomy; ureteral ligation and transection was confirmed. Ventral cystotomy was performed to allow retrograde placement of a double-pigtail ureteral stent into the affected ureter and renal pelvis. End-to-end ureteral anastomosis was performed over the stent with the aid of an operating microscope. Stent position was confirmed via fluoroscopy, and incisions were closed routinely. Dogs continued to have intermittent signs of stranguria until stent removal via cystoscopy 6 or 7 weeks after surgery. Ultrasonographic examination of the urogenital tract was performed 2 or 4 months after surgery, revealing resolution of pyelectasia and hydroureter. The surgical technique used provided a viable option for preserving renal function in dogs with focal, iatrogenic ureteral trauma. Use of a ureteral stent facilitated ureteral anastomosis and minimized postoperative complications.

  18. End-to-end simulation of a K-band LEO-LEO satellite link for estimating water vapor in the low troposphere

    NASA Astrophysics Data System (ADS)

    Facheris, Luca; Cuccoli, Fabrizio; Argenti, Fabrizio

    2004-11-01

    A new differential measurement concept is presented for retrieving the total content of water vapor (IWV, Integrated Water Vapor) along the propagation path between two Low Earth Orbiting (LEO) satellites, while such path is immersing in the atmosphere during a so called set occultation. The new approach, referred to as DSA (Differential Spectral Absorption) method, is based on the simultaneous measurement of the total attenuation at two relatively close frequencies in the K band, and on the estimate of a "spectral sensitivity parameter" that is highly correlated to the IWV content of the LEO-LEO link in the low troposphere. The DSA approach has the potential to overcome all spectrally 'flat' and spectrally correlated phenomena (atmospheric scintillation among these) and provides estimates that can then be usefully integrated with standard radio occultation data products. In the paper we describe the signaling structure chosen for DSA measurements and the transmit-receive system used to simulate an end-to-end transmission during a complete LEO-LEO set occultation. Simulations are based on atmospheric models and on real radiosonde data, which allows us to account for the natural variability of the atmospheric conditions. The effects on the IWV estimates of impairments such as thermal noise at the receiver, atmospheric scintillation, multipath and defocusing are evaluated.

  19. An End-to-End Trainable Neural Network for Image-based Sequence Recognition and Its Application to Scene Text Recognition.

    PubMed

    Shi, Baoguang; Bai, Xiang; Yao, Cong

    2016-12-29

    Image-based sequence recognition has been a long-standing research topic in computer vision. In this paper, we investigate the problem of scene text recognition, which is among the most important and challenging tasks in image-based sequence recognition. A novel neural network architecture, which integrates feature extraction, sequence modeling and transcription into a unified framework, is proposed. Compared with previous systems for scene text recognition, the proposed architecture possesses four distinctive properties: (1) It is end-to-end trainable, in contrast to most of the existing algorithms whose components are separately trained and tuned. (2) It naturally handles sequences in arbitrary lengths, involving no character segmentation or horizontal scale normalization. (3) It is not confined to any predefined lexicon and achieves remarkable performances in both lexicon-free and lexicon-based scene text recognition tasks. (4) It generates an effective yet much smaller model, which is more practical for real-world application scenarios. The experiments on standard benchmarks, including the IIIT-5K, Street View Text and ICDAR datasets, demonstrate the superiority of the proposed algorithm over the prior arts. Moreover, the proposed algorithm performs well in the task of image-based music score recognition, which evidently verifies the generality of it.

  20. Land Mobile Satellite Service (LMSS) channel simulator: An end-to-end hardware simulation and study of the LMSS communications links

    NASA Technical Reports Server (NTRS)

    Salmasi, A. B. (Editor); Springett, J. C.; Sumida, J. T.; Richter, P. H.

    1984-01-01

    The design and implementation of the Land Mobile Satellite Service (LMSS) channel simulator as a facility for an end to end hardware simulation of the LMSS communications links, primarily with the mobile terminal is described. A number of studies are reported which show the applications of the channel simulator as a facility for validation and assessment of the LMSS design requirements and capabilities by performing quantitative measurements and qualitative audio evaluations for various link design parameters and channel impairments under simulated LMSS operating conditions. As a first application, the LMSS channel simulator was used in the evaluation of a system based on the voice processing and modulation (e.g., NBFM with 30 kHz of channel spacing and a 2 kHz rms frequency deviation for average talkers) selected for the Bell System's Advanced Mobile Phone Service (AMPS). The various details of the hardware design, qualitative audio evaluation techniques, signal to channel impairment measurement techniques, the justifications for criteria of different parameter selection in regards to the voice processing and modulation methods, and the results of a number of parametric studies are further described.

  1. Overview of Non-nuclear Testing of the Safe, Affordable 30-kW Fission Engine, Including End-to-End Demonstrator Testing

    NASA Technical Reports Server (NTRS)

    VanDyke, M. K.; Martin, J. J.; Houts, M. G.

    2003-01-01

    Successful development of space fission systems will require an extensive program of affordable and realistic testing. In addition to tests related to design/development of the fission system, realistic testing of the actual flight unit must also be performed. At the power levels under consideration (3-300 kW electric power), almost all technical issues are thermal or stress related and will not be strongly affected by the radiation environment. These issues can be resolved more thoroughly, less expensively, and in a more timely fashing with nonnuclear testing, provided it is prototypic of the system in question. This approach was used for the safe, affordable fission engine test article development program and accomplished viz cooperative efforts with Department of Energy labs, industry, universiites, and other NASA centers. This Technical Memorandum covers the analysis, testing, and data reduction of a 30-kW simulated reactor as well as an end-to-end demonstrator, including a power conversion system and an electric propulsion engine, the first of its kind in the United States.

  2. Determination of anions using monolithic capillary column ion chromatography with end-to-end differential contactless conductometric detectors under resonance approach.

    PubMed

    Zhang, Zhenli; Li, Dongdong; Liu, Xueyong; Subhani, Qamar; Zhu, Yan; Kang, Qi; Shen, Dazhong

    2012-06-21

    An end-to-end differential measurement approach with capacitively coupled contactless conductivity detection (C(4)D) was applied to anion-exchange monolithic capillary column ion chromatography. The column was prepared by thermally initiated radical polymerization of poly(glycidyl methacrylate) in a fused-silica capillary of 320 μm i.d. and modified by quaternary ammonium latex surface coating. Two C(4)Ds were placed near both ends of the capillary column and the output difference between them was measured. With 15 mM potassium hydrogen phthalate used as the eluent, good separation of a mixture of inorganic anions (F(-), Cl(-), NO(2)(-), NO(3)(-)) was achieved. The detection limits of conventional C(4)D are 1.6, 0.28, 0.53, and 0.47 mg L(-1) for F(-), Cl(-), NO(2)(-), and NO(3)(-), respectively. To further enhance the sensitivity, the capacitive impedance from C(4)D was neutralized by an inductive impedance from a piezoelectric resonator. An increase in sensitivity by a factor of 7-8 was achieved in the resonating C(4)D in comparison with the conventional C(4)D. The detection limits of the resonating C(4)D are 0.23, 0.041, 0.065, and 0.059 mg L(-1) for F(-), Cl(-), NO(2)(-), and NO(3)(-), respectively. The response of the resonating C(4)D was analyzed based on an equivalent circuit model.

  3. Distributed Large Data-Object Environments: End-to-End Performance Analysis of High Speed Distributed Storage Systems in Wide Area ATM Networks

    NASA Technical Reports Server (NTRS)

    Johnston, William; Tierney, Brian; Lee, Jason; Hoo, Gary; Thompson, Mary

    1996-01-01

    We have developed and deployed a distributed-parallel storage system (DPSS) in several high speed asynchronous transfer mode (ATM) wide area networks (WAN) testbeds to support several different types of data-intensive applications. Architecturally, the DPSS is a network striped disk array, but is fairly unique in that its implementation allows applications complete freedom to determine optimal data layout, replication and/or coding redundancy strategy, security policy, and dynamic reconfiguration. In conjunction with the DPSS, we have developed a 'top-to-bottom, end-to-end' performance monitoring and analysis methodology that has allowed us to characterize all aspects of the DPSS operating in high speed ATM networks. In particular, we have run a variety of performance monitoring experiments involving the DPSS in the MAGIC testbed, which is a large scale, high speed, ATM network and we describe our experience using the monitoring methodology to identify and correct problems that limit the performance of high speed distributed applications. Finally, the DPSS is part of an overall architecture for using high speed, WAN's for enabling the routine, location independent use of large data-objects. Since this is part of the motivation for a distributed storage system, we describe this architecture.

  4. Evaluation of a composite Gel-Alanine phantom on an end-to-end test to treat multiple brain metastases by a single isocenter VMAT technique.

    PubMed

    Pavoni, Juliana Fernandes; Neves-Junior, Wellington Furtado Pimenta; da Silveira, Matheus Antonio; Haddad, Cecília Maria Kalil; Baffa, Oswaldo

    2017-09-01

    This work aims to evaluate the application of a cylindrical phantom made of dosimetric gel containing alanine pellets distributed inside the gel volume during an end-to-end test of a single isocenter VMAT for simultaneous treatment of multiple brain metastases. The evaluation is based on the comparison of the results obtained with the composite phantom with the treatment planning system (TPS) dose distribution validated by using the clinical conventional quality control with point and planar dose measurements. A cylindrical MAGIC-f gel phantom containing alanine dosimeters (composite phantom) was used to design the VMAT plan in the treatment planning system (TPS). The alanine dosimeters were pellets with radius of 2.5 mm and height of 3 mm, and played the role of brain metastasis inside the gel cylinder, which simulated the cerebral tissue. Five of the alanine dosimeters were selected to simulate five lesions; five planning target volumes (PTVs) were created including the dosimeters and irradiated with different doses. Conventional quality assurance (QA) was performed on the TPS plan and on the composite phantom; a phantom containing only gel (Gel 1 phantom) was also irradiated. One day after irradiation, magnetic resonance images were acquired for both phantoms on a 3T scanner. An electron spin resonance spectrometer was used to evaluate alanine doses. Calibration curves were constructed for the alanine and the gel dosimeters. All the gel only measurement was repeated (Gel 2 phantom) in order to confirm the previous gel measurement. The VMAT treatment plan was approved by the conventional QA. The doses measured by alanine dosimeters on the composite gel phantom agreed to the TPS on average within 3.3%. The alanine dose for each lesion was used to calibrate the gel dosimeter measurements of the concerned PTV. Both gel dose volume histograms (DVH) achieved for each PTV were in agreement with the expected TPS DVH, except for a small discrepancy observed for the Gel 2

  5. The Hurricane-Flood-Landslide Continuum: An Integrated, End-to-end Forecast and Warning System for Mountainous Islands in the Tropics

    NASA Astrophysics Data System (ADS)

    Golden, J.; Updike, R. G.; Verdin, J. P.; Larsen, M. C.; Negri, A. J.; McGinley, J. A.

    2004-12-01

    In the 10 days of 21-30 September 1998, Hurricane Georges left a trail of destruction in the Caribbean region and U.S. Gulf Coast. Subsequently, in the same year, Hurricane Mitch caused widespread destruction and loss of life in four Central American nations, and in December,1999 a tropical disturbance impacted the north coast of Venezuela causing hundreds of deaths and several million dollars of property loss. More recently, an off-season disturbance in the Central Caribbean dumped nearly 250 mm rainfall over Hispaniola during the 24-hr period on May 23, 2004. Resultant flash floods and debris flows in the Dominican Republic and Haiti killed at least 1400 people. In each instance, the tropical system served as the catalyst for major flooding and landslides at landfall. Our goal is to develop and transfer an end-to-end warning system for a prototype region in the Central Caribbean, specifically the islands of Puerto Rico and Hispaniola, which experience frequent tropical cyclones and other disturbances. The envisioned system would include satellite and surface-based observations to track and nowcast dangerous levels of precipitation, atmospheric and hydrological models to predict short-term runoff and streamflow changes, geological models to warn when and where landslides and debris flows are imminent, and the capability to communicate forecast guidance products via satellite to vital government offices in Puerto Rico, Haiti, and the Dominican Republic. In this paper, we shall present a preliminary proof-of-concept study for the May 21-24, 2004 floods and debris-flows over Hispaniola to show that the envisaged flow of data, models and graphical products can produce the desired warning outputs. The multidisciplinary research and technology transfer effort will require blending the talents of hydrometeorologists, geologists, remote sensing and GIS experts, and social scientists to ensure timely delivery of tailored graphical products to both weather offices and local

  6. Endogenous amino nitrogen collected from pigs with end-to-end ileorectal anastomosis is affected by the method of estimation and altered by dietary fiber.

    PubMed

    Mariscal-Landín, G; Sève, B; Colléaux, Y; Lebreton, Y

    1995-01-01

    Endogenous protein loss at the end of the small intestine was determined in two experiments using 10 pigs surgically prepared with end-to-end ileo-rectal anastomosis to allow total collection of ileal digesta. In the first experiment pigs were fed graded protein levels of 0 (protein-free), 55, 110 or 165 g/kg diet. Optimal durations for the adaptation and collection periods were found to be 4 and 3 d, respectively (combination 4:3), as shown by the higher correlation coefficient (r2 = 0.95) between excreted and ingested nitrogen compared with the other combinations tested (5:2, 5:3, 9:3, 9:5). The estimated amounts of endogenous N and amino acids were less accurate and tended to be smaller (P < 0.20) when obtained by extrapolation to zero nitrogen intake than when measured in pigs fed the protein-free diet. The endogenous protein was rich in proline, glutamic acid, glycine, aspartic acid, serine and threonine. In comparison to other amino acid patterns, this composition suggested a low bacterial contamination of the digesta. In the second experiment three levels of dietary fiber from wheat straw, corn cobs and wood cellulose were studied in pigs fed protein-free diets. Between 17 and 34 g crude fiber/kg diet, fiber increased the endogenous losses of nitrogen and amino acids per kilogram of dry matter intake (P < 0.05), but the excretion reached a plateau at higher dietary fiber concentration (102 g/kg). In contrast, glucosamine and galactosamine excretion increased continuously and linearly (P < 0.05) with fiber intake. We conclude that endogenous amino acid loss may be considered constant at usual and high levels of the fibrous mixture under study.

  7. Automated segmentation of 3D anatomical structures on CT images by using a deep convolutional network based on end-to-end learning approach

    NASA Astrophysics Data System (ADS)

    Zhou, Xiangrong; Takayama, Ryosuke; Wang, Song; Zhou, Xinxin; Hara, Takeshi; Fujita, Hiroshi

    2017-02-01

    We have proposed an end-to-end learning approach that trained a deep convolutional neural network (CNN) for automatic CT image segmentation, which accomplished a voxel-wised multiple classification to directly map each voxel on 3D CT images to an anatomical label automatically. The novelties of our proposed method were (1) transforming the anatomical structures segmentation on 3D CT images into a majority voting of the results of 2D semantic image segmentation on a number of 2D-slices from different image orientations, and (2) using "convolution" and "deconvolution" networks to achieve the conventional "coarse recognition" and "fine extraction" functions which were integrated into a compact all-in-one deep CNN for CT image segmentation. The advantage comparing to previous works was its capability to accomplish real-time image segmentations on 2D slices of arbitrary CT-scan-range (e.g. body, chest, abdomen) and produced correspondingly-sized output. In this paper, we propose an improvement of our proposed approach by adding an organ localization module to limit CT image range for training and testing deep CNNs. A database consisting of 240 3D CT scans and a human annotated ground truth was used for training (228 cases) and testing (the remaining 12 cases). We applied the improved method to segment pancreas and left kidney regions, respectively. The preliminary results showed that the accuracies of the segmentation results were improved significantly (pancreas was 34% and kidney was 8% increased in Jaccard index from our previous results). The effectiveness and usefulness of proposed improvement for CT image segmentations were confirmed.

  8. Combined fishing and climate forcing in the southern Benguela upwelling ecosystem: an end-to-end modelling approach reveals dampened effects.

    PubMed

    Travers-Trolet, Morgane; Shin, Yunne-Jai; Shannon, Lynne J; Moloney, Coleen L; Field, John G

    2014-01-01

    The effects of climate and fishing on marine ecosystems have usually been studied separately, but their interactions make ecosystem dynamics difficult to understand and predict. Of particular interest to management, the potential synergism or antagonism between fishing pressure and climate forcing is analysed in this paper, using an end-to-end ecosystem model of the southern Benguela ecosystem, built from coupling hydrodynamic, biogeochemical and multispecies fish models (ROMS-N2P2Z2D2-OSMOSE). Scenarios of different intensities of upwelling-favourable wind stress combined with scenarios of fishing top-predator fish were tested. Analyses of isolated drivers show that the bottom-up effect of the climate forcing propagates up the food chain whereas the top-down effect of fishing cascades down to zooplankton in unfavourable environmental conditions but dampens before it reaches phytoplankton. When considering both climate and fishing drivers together, it appears that top-down control dominates the link between top-predator fish and forage fish, whereas interactions between the lower trophic levels are dominated by bottom-up control. The forage fish functional group appears to be a central component of this ecosystem, being the meeting point of two opposite trophic controls. The set of combined scenarios shows that fishing pressure and upwelling-favourable wind stress have mostly dampened effects on fish populations, compared to predictions from the separate effects of the stressors. Dampened effects result in biomass accumulation at the top predator fish level but a depletion of biomass at the forage fish level. This should draw our attention to the evolution of this functional group, which appears as both structurally important in the trophic functioning of the ecosystem, and very sensitive to climate and fishing pressures. In particular, diagnoses considering fishing pressure only might be more optimistic than those that consider combined effects of fishing and

  9. Design of a satellite end-to-end mission performance simulator for imaging spectrometers and its application to the ESA's FLEX/Sentinel-3 tandem mission

    NASA Astrophysics Data System (ADS)

    Vicent, Jorge; Sabater, Neus; Tenjo, Carolina; Acarreta, Juan R.; Manzano, María.; Rivera, Juan P.; Jurado, Pedro; Franco, Raffaella; Alonso, Luis; Moreno, Jose

    2015-09-01

    The performance analysis of a satellite mission requires specific tools that can simulate the behavior of the platform; its payload; and the acquisition of scientific data from synthetic scenes. These software tools, called End-to-End Mission Performance Simulators (E2ES), are promoted by the European Space Agency (ESA) with the goal of consolidating the instrument and mission requirements as well as optimizing the implemented data processing algorithms. Nevertheless, most developed E2ES are designed for a specific satellite mission and can hardly be adapted to other satellite missions. In the frame of ESA's FLEX mission activities, an E2ES is being developed based on a generic architecture for passive optical missions. FLEX E2ES implements a state-of-the-art synthetic scene generator that is coupled with dedicated algorithms that model the platform and instrument characteristics. This work will describe the flexibility of the FLEX E2ES to simulate complex synthetic scenes with a variety of land cover classes, topography and cloud cover that are observed separately by each instrument (FLORIS, OLCI and SLSTR). The implemented algorithms allows modelling the sensor behavior, i.e. the spectral/spatial resampling of the input scene; the geometry of acquisition; the sensor noises and non-uniformity effects (e.g. stray-light, spectral smile and radiometric noise); and the full retrieval scheme up to Level-2 products. It is expected that the design methodology implemented in FLEX E2ES can be used as baseline for other imaging spectrometer missions and will be further expanded towards a generic E2ES software tool.

  10. Assessing the value of seasonal climate forecast information through an end-to-end forecasting framework: Application to U.S. 2012 drought in central Illinois

    NASA Astrophysics Data System (ADS)

    Shafiee-Jood, Majid; Cai, Ximing; Chen, Ligang; Liang, Xin-Zhong; Kumar, Praveen

    2014-08-01

    This study proposes an end-to-end forecasting framework to incorporate operational seasonal climate forecasts to help farmers improve their decisions prior to the crop growth season, which are vulnerable to unanticipated drought conditions. The framework couples a crop growth model with a decision-making model for rainfed agriculture and translates probabilistic seasonal forecasts into more user-related information that can be used to support farmers' decisions on crop type and some market choices (e.g., contracts with ethanol refinery). The regional Climate-Weather Research and Forecasting model (CWRF) driven by two operational general circulation models (GCMs) is used to provide the seasonal forecasts of weather parameters. To better assess the developed framework, CWRF is also driven by observational reanalysis data, which theoretically can be considered as the best seasonal forecast. The proposed framework is applied to the Salt Creek watershed in Illinois that experienced an extreme drought event during 2012 crop growth season. The results show that the forecasts cannot capture the 2012 drought condition in Salt Creek and therefore the suggested decisions can make farmers worse off if the suggestions are adopted. Alternatively, the optimal decisions based on reanalysis-based CWRF forecasts, which can capture the 2012 drought conditions, make farmers better off by suggesting "no-contract" with ethanol refineries. This study suggests that the conventional metric used for ex ante value assessment is not capable of providing meaningful information in the case of extreme drought. Also, it is observed that institutional interventions (e.g., crop insurance) highly influences farmers' decisions and, thereby, the assessment of forecast value.

  11. OpenCyto: an open source infrastructure for scalable, robust, reproducible, and automated, end-to-end flow cytometry data analysis.

    PubMed

    Finak, Greg; Frelinger, Jacob; Jiang, Wenxin; Newell, Evan W; Ramey, John; Davis, Mark M; Kalams, Spyros A; De Rosa, Stephen C; Gottardo, Raphael

    2014-08-01

    Flow cytometry is used increasingly in clinical research for cancer, immunology and vaccines. Technological advances in cytometry instrumentation are increasing the size and dimensionality of data sets, posing a challenge for traditional data management and analysis. Automated analysis methods, despite a general consensus of their importance to the future of the field, have been slow to gain widespread adoption. Here we present OpenCyto, a new BioConductor infrastructure and data analysis framework designed to lower the barrier of entry to automated flow data analysis algorithms by addressing key areas that we believe have held back wider adoption of automated approaches. OpenCyto supports end-to-end data analysis that is robust and reproducible while generating results that are easy to interpret. We have improved the existing, widely used core BioConductor flow cytometry infrastructure by allowing analysis to scale in a memory efficient manner to the large flow data sets that arise in clinical trials, and integrating domain-specific knowledge as part of the pipeline through the hierarchical relationships among cell populations. Pipelines are defined through a text-based csv file, limiting the need to write data-specific code, and are data agnostic to simplify repetitive analysis for core facilities. We demonstrate how to analyze two large cytometry data sets: an intracellular cytokine staining (ICS) data set from a published HIV vaccine trial focused on detecting rare, antigen-specific T-cell populations, where we identify a new subset of CD8 T-cells with a vaccine-regimen specific response that could not be identified through manual analysis, and a CyTOF T-cell phenotyping data set where a large staining panel and many cell populations are a challenge for traditional analysis. The substantial improvements to the core BioConductor flow cytometry packages give OpenCyto the potential for wide adoption. It can rapidly leverage new developments in computational

  12. An End-to-End simulator for the development of atmospheric corrections and temperature - emissivity separation algorithms in the TIR spectral domain

    NASA Astrophysics Data System (ADS)

    Rock, Gilles; Fischer, Kim; Schlerf, Martin; Gerhards, Max; Udelhoven, Thomas

    2017-04-01

    The development and optimization of image processing algorithms requires the availability of datasets depicting every step from earth surface to the sensor's detector. The lack of ground truth data obliges to develop algorithms on simulated data. The simulation of hyperspectral remote sensing data is a useful tool for a variety of tasks such as the design of systems, the understanding of the image formation process, and the development and validation of data processing algorithms. An end-to-end simulator has been set up consisting of a forward simulator, a backward simulator and a validation module. The forward simulator derives radiance datasets based on laboratory sample spectra, applies atmospheric contributions using radiative transfer equations, and simulates the instrument response using configurable sensor models. This is followed by the backward simulation branch, consisting of an atmospheric correction (AC), a temperature and emissivity separation (TES) or a hybrid AC and TES algorithm. An independent validation module allows the comparison between input and output dataset and the benchmarking of different processing algorithms. In this study, hyperspectral thermal infrared scenes of a variety of surfaces have been simulated to analyze existing AC and TES algorithms. The ARTEMISS algorithm was optimized and benchmarked against the original implementations. The errors in TES were found to be related to incorrect water vapor retrieval. The atmospheric characterization could be optimized resulting in increasing accuracies in temperature and emissivity retrieval. Airborne datasets of different spectral resolutions were simulated from terrestrial HyperCam-LW measurements. The simulated airborne radiance spectra were subjected to atmospheric correction and TES and further used for a plant species classification study analyzing effects related to noise and mixed pixels.

  13. Enzymatic reaction modulated gold nanorod end-to-end self-assembly for ultrahigh sensitively colorimetric sensing of cholinesterase and organophosphate pesticides in human blood.

    PubMed

    Lu, Linlin; Xia, Yunsheng

    2015-08-18

    We present herein the first reported self-assembly modulation of gold nanorods (AuNRs) by enzymatic reaction, which is further employed for colorimetric assays of cholinesterase (ChE) and organophosphate pesticides (OPs) in human blood. ChE catalyzes its substrate (acetylthiocholine) and produces thiocholine and acetate acid. The resulting thiols then react with the tips of the AuNRs by S-Au conjunction and prevent subsequent cysteine-induced AuNR end-to-end (EE) self-assembly. Correspondingly, the AuNR surface plasmon resonance is regulated, which results in a distinctly ratiometric signal output. Under optimal conditions, the linear range is 0.042 to 8.4 μU/mL, and the detection limit is as low as 0.018 μU/mL. As ChE is incubated with OPs, the enzymatic activity is inhibited. So, the cysteine-induced assembly is observed again. On the basis of this principle, OPs can be well determined ranging from 0.12 to 40 pM with a 0.039 pM detection limit. To our knowledge, the present quasi pU/mL level sensitivity for ChE and the quasi femtomolar level sensitivity for OPs are at least 500 and 7000 times lower than those of previous colorimetric methods, respectively. The ultrahigh sensitivity results from (1) the rational choice of anisotropic AuNRs as building blocks and reporters and (2) the specific structure of the enzymatic thiocholine. Because of ultrahigh sensitivity, serum samples are allowed to be extremely diluted in the assay. Accordingly, various nonspecific interactions, even from glutathione/cysteine, are well avoided. So, both ChE and OPs in human blood can be directly assayed without any prepurification, indicating the simplicity and practical promise of the proposed method.

  14. Combined Fishing and Climate Forcing in the Southern Benguela Upwelling Ecosystem: An End-to-End Modelling Approach Reveals Dampened Effects

    PubMed Central

    Travers-Trolet, Morgane; Shin, Yunne-Jai; Shannon, Lynne J.; Moloney, Coleen L.; Field, John G.

    2014-01-01

    The effects of climate and fishing on marine ecosystems have usually been studied separately, but their interactions make ecosystem dynamics difficult to understand and predict. Of particular interest to management, the potential synergism or antagonism between fishing pressure and climate forcing is analysed in this paper, using an end-to-end ecosystem model of the southern Benguela ecosystem, built from coupling hydrodynamic, biogeochemical and multispecies fish models (ROMS-N2P2Z2D2-OSMOSE). Scenarios of different intensities of upwelling-favourable wind stress combined with scenarios of fishing top-predator fish were tested. Analyses of isolated drivers show that the bottom-up effect of the climate forcing propagates up the food chain whereas the top-down effect of fishing cascades down to zooplankton in unfavourable environmental conditions but dampens before it reaches phytoplankton. When considering both climate and fishing drivers together, it appears that top-down control dominates the link between top-predator fish and forage fish, whereas interactions between the lower trophic levels are dominated by bottom-up control. The forage fish functional group appears to be a central component of this ecosystem, being the meeting point of two opposite trophic controls. The set of combined scenarios shows that fishing pressure and upwelling-favourable wind stress have mostly dampened effects on fish populations, compared to predictions from the separate effects of the stressors. Dampened effects result in biomass accumulation at the top predator fish level but a depletion of biomass at the forage fish level. This should draw our attention to the evolution of this functional group, which appears as both structurally important in the trophic functioning of the ecosystem, and very sensitive to climate and fishing pressures. In particular, diagnoses considering fishing pressure only might be more optimistic than those that consider combined effects of fishing and

  15. Spectrum reconstruction method based on the detector response model calibrated by x-ray fluorescence

    NASA Astrophysics Data System (ADS)

    Li, Ruizhe; Li, Liang; Chen, Zhiqiang

    2017-02-01

    Accurate estimation of distortion-free spectra is important but difficult in various applications, especially for spectral computed tomography. Two key problems must be solved to reconstruct the incident spectrum. One is the acquisition of the detector energy response. It can be calculated by Monte Carlo simulation, which requires detailed modeling of the detector system and a high computational power. It can also be acquired by establishing a parametric response model and be calibrated using monochromatic x-ray sources, such as synchrotron sources or radioactive isotopes. However, these monochromatic sources are difficult to obtain. Inspired by x-ray fluorescence (XRF) spectrum modeling, we propose a feasible method to obtain the detector energy response based on an optimized parametric model for CdZnTe or CdTe detectors. The other key problem is the reconstruction of the incident spectrum with the detector response. Directly obtaining an accurate solution from noisy data is difficult because the reconstruction problem is severely ill-posed. Different from the existing spectrum stripping method, a maximum likelihood-expectation maximization iterative algorithm is developed based on the Poisson noise model of the system. Simulation and experiment results show that our method is effective for spectrum reconstruction and markedly increases the accuracy of XRF spectra compared with the spectrum stripping method. The applicability of the proposed method is discussed, and promising results are presented.

  16. Spectrum reconstruction method based on the detector response model calibrated by x-ray fluorescence.

    PubMed

    Li, Ruizhe; Li, Liang; Chen, Zhiqiang

    2017-02-07

    Accurate estimation of distortion-free spectra is important but difficult in various applications, especially for spectral computed tomography. Two key problems must be solved to reconstruct the incident spectrum. One is the acquisition of the detector energy response. It can be calculated by Monte Carlo simulation, which requires detailed modeling of the detector system and a high computational power. It can also be acquired by establishing a parametric response model and be calibrated using monochromatic x-ray sources, such as synchrotron sources or radioactive isotopes. However, these monochromatic sources are difficult to obtain. Inspired by x-ray fluorescence (XRF) spectrum modeling, we propose a feasible method to obtain the detector energy response based on an optimized parametric model for CdZnTe or CdTe detectors. The other key problem is the reconstruction of the incident spectrum with the detector response. Directly obtaining an accurate solution from noisy data is difficult because the reconstruction problem is severely ill-posed. Different from the existing spectrum stripping method, a maximum likelihood-expectation maximization iterative algorithm is developed based on the Poisson noise model of the system. Simulation and experiment results show that our method is effective for spectrum reconstruction and markedly increases the accuracy of XRF spectra compared with the spectrum stripping method. The applicability of the proposed method is discussed, and promising results are presented.

  17. Reconstruction of the primordial power spectrum using temperature and polarisation data from multiple experiments

    SciTech Connect

    Nicholson, Gavin; Contaldi, Carlo R. E-mail: c.contaldi@imperial.ac.uk

    2009-07-01

    We develop a method to reconstruct the primordial power spectrum, P(k), using both temperature and polarisation data from the joint analysis of a number of Cosmic Microwave Background (CMB) observations. The method is an extension of the Richardson-Lucy algorithm, first applied in this context by Shafieloo and Souradeep [1]. We show how the inclusion of polarisation measurements can decrease the uncertainty in the reconstructed power spectrum. In particular, the polarisation data can constrain oscillations in the spectrum more effectively than total intensity only measurements. We apply the estimator to a compilation of current CMB results. The reconstructed spectrum is consistent with the best-fit power spectrum although we find evidence for a 'dip' in the power on scales k ≈ 0.002 Mpc{sup −1}. This feature appears to be associated with the WMAP power in the region 18 ≤ l ≤ 26 which is consistently below best-fit models. We also forecast the reconstruction for a simulated, Planck-like [2] survey including sample variance limited polarisation data.

  18. SU-E-T-360: End-To-End Dosimetric Testing of a Versa HD Linear Accelerator with the Agility Head Modeled in Pinnacle3

    SciTech Connect

    Saenz, D; Narayanasamy, G; Cruz, W; Papanikolaou, N; Stathakis, S

    2015-06-15

    Purpose: The Versa HD incorporates a variety of upgrades, primarily including the Agility head. The distinct dosimetric properties of the head from its predecessors combined with flattening-filter-free (FFF) beams require a new investigation of modeling in planning systems and verification of modeling accuracy. Methods: A model was created in Pinnacle{sup 3} v9.8 with commissioned beam data. Leaf transmission was modeled as <0.5% with maximum leaf speed of 3 cm/s. Photon spectra were tuned for FFF beams, for which profiles were modeled with arbitrary profiles rather than with cones. For verification, a variety of plans with varied parameters were devised, and point dose measurements were compared to calculated values. A phantom of several plastic water and Styrofoam slabs was scanned and imported into Pinnacle{sup 3}. Beams of different field sizes, SSD, wedges, and gantry angles were created. All available photon energies (6 MV, 10 MV, 18 MV, 6 FFF, 10 FFF) as well four clinical electron energies (6, 9, 12, and 15 MeV) were investigated. The plans were verified at a calculation point (8 cm deep for photons, variable for electrons) by measurement with a PTW Semiflex ionization chamber. In addition, IMRT testing was performed with three standard plans (step and shoot IMRT, small and large field VMAT plans). The plans were delivered on the Delta4 IMRT QA phantom (ScandiDos, Uppsala, Sweden). Results: Homogeneous point dose measurement agreed within 2% for all photon and electron beams. Open field photon measurements along the central axis at 100 cm SSD passed within 1%. Gamma passing rates were >99.5% for all plans with a 3%/3mm tolerance criteria. The IMRT QA results for the first 23 patients yielded gamma passing rates of 97.4±2.3%. Conclusion: The end-to-end testing ensured confidence in the ability of Pinnacle{sup 3} to model photon and electron beams with the Agility head.

  19. SU-E-T-19: A New End-To-End Test Method for ExacTrac for Radiation and Plan Isocenter Congruence

    SciTech Connect

    Lee, S; Nguyen, N; Liu, F; Huang, Y; Jung, J; Pyakuryal, A; Jang, S

    2014-06-01

    Purpose: To combine and integrate quality assurance (QA) of target localization and radiation isocenter End to End (E2E) test of BrainLAB ExacTrac system, a new QA approach was devised using anthropomorphic head and neck phantom. This test insures the target localization as well as radiation isocenter congruence which is one step ahead the current ExacTrac QA procedures. Methods: The head and neck phantom typically used for CyberKnife E2E test was irradiated to the sphere target that was visible in CT-sim images. The CT-sim was performed using 1 mm thickness slice with helical scanning technique. The size of the sphere was 3-cm diameter and contoured as a target volume using iPlan V.4.5.2. A conformal arc plan was generated using MLC-based with 7 fields, and five of them were include couch rotations. The prescription dose was 5 Gy and 95% coverage to the target volume. For the irradiation, two Gafchromic films were perpendicularly inserted into the cube that hold sphere inside. The linac used for the irradiation was TrueBeam STx equipped with HD120 MLC. In order to use ExacTrac, infra-red head–array was used to correlate orthogonal X-ray images. Results: Using orthogonal X-rays of ExacTrac the phantom was positioned. For each field, phantom was check again with X-rays and re-positioned if necessary. After each setup using ExacTrac, the target was irradiated. The films were analyzed to determine the deviation of the radiation isocenter in all three dimensions: superior-inferior, left-right and anterior-posterior. The total combining error was found to be 0.76 mm ± 0.05 mm which was within sub-millimeter accuracy. Conclusion: Until now, E2E test for ExacTrac was separately implemented to test image localization and radiation isocenter. This new method can be used for periodic QA procedures.

  20. RTEMP: Exploring an end-to-end, agnostic platform for multidisciplinary real-time analytics in the space physics community and beyond

    NASA Astrophysics Data System (ADS)

    Chaddock, D.; Donovan, E.; Spanswick, E.; Jackel, B. J.

    2014-12-01

    Large-scale, real-time, sensor-driven analytics are a highly effective set of tools in many research environments; however, the barrier to entry is expensive and the learning curve is steep. These systems need to operate efficiently from end to end, with the key aspects being data transmission, acquisition, management and organization, and retrieval. When building a generic multidisciplinary platform, acquisition and data management needs to be designed with scalability and flexibility as the primary focus. Additionally, in order to leverage current sensor web technologies, the integration of common sensor data standards (ie. SensorML and SWE Services) should be supported. Perhaps most important, researchers should be able to get started and integrate the platform into their set of research tools as easily and quickly as possible. The largest issue with current platforms is that the sensor data must be formed and described using the previously mentioned standards. As useful as these standards are for organizing data, they are cumbersome to adopt, often restrictive, and are required to be geospatially-driven. Our solution, RTEMP (Real-time Environment Monitoring Platform), is a real-time analytics platform with over ten years and an estimated two million dollars of investment. It has been developed for our continuously expanding requirements of operating and building remote sensors and supporting equipment for space physics research. A key benefit of our approach is RTEMP's ability to manage agnostic data. This allows data that flows through the system to be structured in any way that best addresses the needs of the sensor operators and data users, enabling extensive flexibility and streamlined development and research. Here we begin with an overview of RTEMP and how it is structured. Additionally, we will showcase the ways that we are using RTEMP and how it is being adopted by researchers in an increasingly broad range of other research fields. We will lay out a

  1. SU-E-J-25: End-To-End (E2E) Testing On TomoHDA System Using a Real Pig Head for Intracranial Radiosurgery

    SciTech Connect

    Corradini, N; Leick, M; Bonetti, M; Negretti, L

    2015-06-15

    Purpose: To determine the MVCT imaging uncertainty on the TomoHDA system for intracranial radiosurgery treatments. To determine the end-to-end (E2E) overall accuracy of the TomoHDA system for intracranial radiosurgery. Methods: A pig head was obtained from the butcher, cut coronally through the brain, and preserved in formaldehyde. The base of the head was fixed to a positioning plate allowing precise movement, i.e. translation and rotation, in all 6 axes. A repeatability test was performed on the pig head to determine uncertainty in the image bone registration algorithm. Furthermore, the test studied images with MVCT slice thicknesses of 1 and 3 mm in unison with differing scan lengths. A sensitivity test was performed to determine the registration algorithm’s ability to find the absolute position of known translations/rotations of the pig head. The algorithm’s ability to determine absolute position was compared against that of manual operators, i.e. a radiation therapist and radiation oncologist. Finally, E2E tests for intracranial radiosurgery were performed by measuring the delivered dose distributions within the pig head using Gafchromic films. Results: The repeatability test uncertainty was lowest for the MVCTs of 1-mm slice thickness, which measured less than 0.10 mm and 0.12 deg for all axes. For the sensitivity tests, the bone registration algorithm performed better than human eyes and a maximum difference of 0.3 mm and 0.4 deg was observed for the axes. E2E test results in absolute position difference measured 0.03 ± 0.21 mm in x-axis and 0.28 ± 0.18 mm in y-axis. A maximum difference of 0.32 and 0.66 mm was observed in x and y, respectively. The average peak dose difference between measured and calculated dose was 2.7 cGy or 0.4%. Conclusion: Our tests using a pig head phantom estimate the TomoHDA system to have a submillimeter overall accuracy for intracranial radiosurgery.

  2. TU-E-BRB-11: End-To-End Positioning Quality Assurance for Image-Guided Radiosurgery of Multiple Targets Using a Single-Isocenter.

    PubMed

    Popple, R; Fiveash, J; Duan, J; Wu, X; Shen, S; Cardan, R; Brezovich, I

    2012-06-01

    Using a single isocenter significantly reduces delivery times in radiosurgery involving multiple targets. However, because not every target can be placed at isocenter with this type of treatment, a conventional Winston-Lutz test cannot be used. We describe a novel Winston-Lutz like mulitarget test (MTT) for verifying accurate positioning. A target phantom, comprised of an acrylic plate with recesses for three 3/4″ spheres was constructed and a high-resolution (0.5×0.5×0.8 mm) CT scan obtained with PTFE spheres placed in the recesses. The scan was imported into a commercial treatment planning system and multiple beams were prepared, having their isocenter at the centroid of the arrangement of spheres. Every beam incorporated three MLC-defined rectangular apertures that circumscribed the spheres. Custom software selected setup parameters (table, gantry and collimator angle, MLC openings) such that the spheres were centered as precisely as possible within their respective MLC fields, considering the discrete width of collimator leaves. The phantom, with the PTFE replaced by steel spheres, was placed on the treatment couch and imaged using stereoscopic x-ray beams. A 6 degree-of-freedom robotic couch applied translations and rotations to reproduce the CT position. A MV EPID rendered images of the spheres within their respective apertures, allowing identification of sphere and aperture centers. Any error upstream would manifest itself as inaccurate centering of a sphere. Eight beams with table angle 0 and two beams each with table angles 49.7, 89.8, 272.3, and 310.1 were selected. The maximum calculated distance between any sphere and the respective aperture center was 0.07 mm. The median difference measured from the MV images ranged from 0.1 mm to 1.4 mm with a median of 0.8 mm. The MTT is a practical end-to-end test for quality assurance of the entire positioning process in multitarget radiosurgery, from CT scanning to beam delivery. © 2012 American Association

  3. Quantifying residual ionospheric errors in GNSS radio occultation bending angles based on ensembles of profiles from end-to-end simulations

    NASA Astrophysics Data System (ADS)

    Liu, C. L.; Kirchengast, G.; Zhang, K.; Norman, R.; Li, Y.; Zhang, S. C.; Fritzer, J.; Schwaerz, M.; Wu, S. Q.; Tan, Z. X.

    2015-01-01

    The radio occultation (RO) technique using signals from the Global Navigation Satellite System (GNSS), in particular from the Global Positioning System (GPS) so far, is meanwhile widely used to observe the atmosphere for applications such as numerical weather prediction and global climate monitoring. The ionosphere is a major error source in RO measurements at stratospheric altitudes and a linear ionospheric correction of dual-frequency RO bending angles is commonly used to remove the first-order ionospheric effect. However, the residual ionopheric error (RIE) can still be significant so that it needs to be further mitigated for high accuracy applications, especially above about 30 km altitude where the RIE is most relevant compared to the magnitude of the neutral atmospheric bending angle. Quantification and careful analyses for better understanding of the RIE is therefore important towards enabling benchmark-quality stratospheric RO retrievals. Here we present such an analysis of bending angle RIEs covering the stratosphere and mesosphere, using quasi-realistic end-to-end simulations for a full-day ensemble of RO events. Based on the ensemble simulations we assessed the variation of bending angle RIEs, both biases and SDs, with solar activity, latitudinal region, and with or without the assumption of ionospheric spherical symmetry and of co-existing observing system errors. We find that the bending angle RIE biases in the upper stratosphere and mesosphere, and in all latitudinal zones from low- to high-latitudes, have a clear negative tendency and a magnitude increasing with solar activity, in line with recent empirical studies based on real RO data. The maximum RIE biases are found at low latitudes during daytime, where they amount to with in -0.03 to -0.05 μrad, the smallest at high latitudes (0 to -0.01 μrad; quiet space weather and winter conditions). Ionospheric spherical symmetry or asymmetries about the RO event location have only a minor influence on

  4. Quantifying residual ionospheric errors in GNSS radio occultation bending angles based on ensembles of profiles from end-to-end simulations

    NASA Astrophysics Data System (ADS)

    Liu, C. L.; Kirchengast, G.; Zhang, K.; Norman, R.; Li, Y.; Zhang, S. C.; Fritzer, J.; Schwaerz, M.; Wu, S. Q.; Tan, Z. X.

    2015-07-01

    The radio occultation (RO) technique using signals from the Global Navigation Satellite System (GNSS), in particular from the Global Positioning System (GPS) so far, is currently widely used to observe the atmosphere for applications such as numerical weather prediction and global climate monitoring. The ionosphere is a major error source in RO measurements at stratospheric altitudes, and a linear ionospheric correction of dual-frequency RO bending angles is commonly used to remove the first-order ionospheric effect. However, the residual ionospheric error (RIE) can still be significant so that it needs to be further mitigated for high-accuracy applications, especially above about 30 km altitude where the RIE is most relevant compared to the magnitude of the neutral atmospheric bending angle. Quantification and careful analyses for better understanding of the RIE is therefore important for enabling benchmark-quality stratospheric RO retrievals. Here we present such an analysis of bending angle RIEs covering the stratosphere and mesosphere, using quasi-realistic end-to-end simulations for a full-day ensemble of RO events. Based on the ensemble simulations we assessed the variation of bending angle RIEs, both biases and standard deviations, with solar activity, latitudinal region and with or without the assumption of ionospheric spherical symmetry and co-existing observing system errors. We find that the bending angle RIE biases in the upper stratosphere and mesosphere, and in all latitudinal zones from low to high latitudes, have a clear negative tendency and a magnitude increasing with solar activity, which is in line with recent empirical studies based on real RO data although we find smaller bias magnitudes, deserving further study in the future. The maximum RIE biases are found at low latitudes during daytime, where they amount to within -0.03 to -0.05 μrad, the smallest at high latitudes (0 to -0.01 μrad; quiet space weather and winter conditions

  5. SU-E-J-194: Dynamic Tumor Tracking End-To-End Testing Using a 4D Thorax Phantom and EBT3 Films

    SciTech Connect

    Su, Z; Wu, J; Li, Z; Mamalui-Hunter, M

    2014-06-01

    Purpose: To quantify the Vero linac dosimetric accuracy of the tumor dynamic tracking treatment using EBT3 film embedded in a 4D thorax phantom. Methods: A dynamic thorax phantom with tissue equivalent materials and a film insert were used in this study. The thorax phantom was scanned in 4DCT mode with a viscoil embedded in its film insert composed of lung equivalent material. Dynamic tracking planning was performed using the 50% phase CT set with 5 conformal beams at gantry angles of 330, 15, 60, 105 and 150 degrees. Each field is a 3cm by 3cm square centered at viscoil since there was no solid mass target. Total 3 different 1–2cos4 motion profiles were used with varied motion magnitude and cycle frequency. Before treatment plan irradiation, a 4D motion model of the target was established using a series of acquired fluoroscopic images and infrared markers motion positions. During irradiation, fluoroscopic image monitoring viscoil motion was performed to verify model validity. The irradiated films were scanned and the dose maps were compared to the planned Monte Carlo dose distributions. Gamma analyses using 3%–3mm, 2%–3mm, 3%–2mm, 2%–2mm criteria were performed and presented. Results: For each motion pattern, a 4D motion model was built successfully and the target tracking performance was verified with fluoroscopic monitoring of the viscoil motion and its model predicted locations. The film gamma analysis showed the average pass rates among the 3 motion profiles are 98.14%, 96.2%, 91.3% and 85.61% for 3%–3mm, 2%–3mm, 3%–2mm, 2%–2mm criteria. Conclusion: Target dynamic tracking was performed using patient-like breathing patterns in a 4D thorax phantom with EBT3 film insert and a viscoil. There was excellent agreement between acquired and planned dose distributions for all three target motion patterns. This study performed end-to-end testing and verified the treatment accuracy of tumor dynamic tracking.

  6. Spectrum Reconstruction of a Spatially Modulated Fourier Transform Spectrometer Based on Stepped Mirrors.

    PubMed

    Gao, Jianhua; Liang, Zhongzhu; Liang, Jingqiu; Wang, Weibiao; Lü, Jinguang; Qin, Yuxin

    2016-11-23

    Based on the basic configuration and interference principle of a static step-mirror-based Fourier transform spectrometer, an image segmentation method is proposed to obtain a one-dimensional interferogram. The direct current component of the interferogram is fit using the least squares (LS) method and is subsequently removed. An empirical-mode decomposition-method-based high-pass filter is constructed to denoise the spectrum and enhance the spectral resolution simultaneously. Several experiments were performed and the spectrum is reconstructed based on these methods. The spectrum resolution is 81 cm(-1) at 2254 cm(-1).

  7. Noise correction in power spectrum and image reconstruction with speckle holography.

    NASA Astrophysics Data System (ADS)

    Qiu, Yao-Hui; Zhang, Rui-Long; Lou, Ke; Lu, Ru-Wei; Liu, Zhong

    At first, the principle of speckle holography is introduced briefly, then some influences upon power spectrum arised from the noise in real data is analysed and a method to correct the noise bias is discussed. At last, a high resolution image reconstruction experiment for two double stars is reported.

  8. A Vehicle Management End-to-End Testing and Analysis Platform for Validation of Mission and Fault Management Algorithms to Reduce Risk for NASA's Space Launch System

    NASA Technical Reports Server (NTRS)

    Trevino, Luis; Johnson, Stephen B.; Patterson, Jonathan; Teare, David

    2015-01-01

    The development of the Space Launch System (SLS) launch vehicle requires cross discipline teams with extensive knowledge of launch vehicle subsystems, information theory, and autonomous algorithms dealing with all operations from pre-launch through on orbit operations. The characteristics of these systems must be matched with the autonomous algorithm monitoring and mitigation capabilities for accurate control and response to abnormal conditions throughout all vehicle mission flight phases, including precipitating safing actions and crew aborts. This presents a large complex systems engineering challenge being addressed in part by focusing on the specific subsystems handling of off-nominal mission and fault tolerance. Using traditional model based system and software engineering design principles from the Unified Modeling Language (UML), the Mission and Fault Management (M&FM) algorithms are crafted and vetted in specialized Integrated Development Teams composed of multiple development disciplines. NASA also has formed an M&FM team for addressing fault management early in the development lifecycle. This team has developed a dedicated Vehicle Management End-to-End Testbed (VMET) that integrates specific M&FM algorithms, specialized nominal and off-nominal test cases, and vendor-supplied physics-based launch vehicle subsystem models. The flexibility of VMET enables thorough testing of the M&FM algorithms by providing configurable suites of both nominal and off-nominal test cases to validate the algorithms utilizing actual subsystem models. The intent is to validate the algorithms and substantiate them with performance baselines for each of the vehicle subsystems in an independent platform exterior to flight software test processes. In any software development process there is inherent risk in the interpretation and implementation of concepts into software through requirements and test processes. Risk reduction is addressed by working with other organizations such as S

  9. Micro-ARES, an electric-field sensor for ExoMars 2016: Electric fields modelling, sensitivity evaluations and end-to-end tests.

    NASA Astrophysics Data System (ADS)

    Déprez, Grégoire; Montmessin, Franck; Witasse, Olivier; Lapauw, Laurent; Vivat, Francis; Abbaki, Sadok; Granier, Philippe; Moirin, David; Trautner, Roland; Hassen-Khodja, Rafik; d'Almeida, Éric; Chardenal, Laurent; Berthelier, Jean-Jacques; Esposito, Francesca; Debei, Stefano; Rafkin, Scott; Barth, Erika

    2014-05-01

    Earth and transposed to the Martian atmospheric parameters. Knowing the expected electric fields and simulating them, the next step in order to evaluate the performance of the instrument is to determine its sensitivity by modelling the response of the instrument. The last step is to confront the model of the instrument, and the expected results for a given signal with the effective outputs of the electric board with the same signal as an input. To achieve this end-to-end test, we use a signal generator followed by an electrical circuit reproducing the electrode behaviour in the Martian environment, in order to inject a realistic electric signal in the processing board and finally compare the produced formatted data with the expected ones.

  10. Screening and comparison of polychromatic and monochromatic image reconstruction of abdominal arterial energy spectrum CT.

    PubMed

    Wang, X P; Wang, B; Hou, P; Li, R; Gao, J B

    2017-01-01

    We screened the suitable image reconstruction to observe the abdominal artery and compare the quality between the polychromatic and the monochromatic reconstruction images of the abdominal artery spectrum CT. Eighty patients underwent Gemstone CT energy spectrum imaging to obtain an abdominal artery polychromatic image (140 kVp) and a monochromatic image from 40 ~ 140 keV. The CT value of region of interest (ROI) was measured on the polychromatic image and the single energy image. The signal-to-noise ratio (SNR) and contrast-to-noise ratio (CNR) of the abdominal aorta and hepatic artery were determined. The images in each group underwent image quality subjective scoring by three experienced radiologists using a blinded method. Finally, comprehensive comparisons and image quality subjective scorings were performed on the CT, SNR, and CNR values of the abdominal aorta. The obtained data were statistically analyzed by SPSS 19.0 software. When the keV value was reduced, the CT value of the abdominal artery gradually increased, and the image noise also changed. The comprehensive comparisons and subjective scorings were finalized for each single energy image based on the abdominal artery image quality objective indicators (CT value, SNR, and CNR). Results revealed that the abdominal artery image quality in the 50 ~ 60 keV monochromatic group was better compared to the polychromatic group. Furthermore, onochromatic imaging had different impacts on the abdominal aorta and hepatic artery image qualities. In different types of abdominal arterial reconstruction images obtained using abdominal energy spectrum CT conventional enhanced scanning, the image quality of the 50 ~ 60keV monochromatic reconstruction was higher when compared with the polychromatic reconstruction. Thus, it is recommended to apply the conventional reconstruction for abdominal artery energy spectrum CT scanning.

  11. Reconstruction of absolute absorption spectrum of reduced heme a in cytochrome C oxidase from bovine heart.

    PubMed

    Dyuba, A V; Vygodina, T V; Konstantinov, A A

    2013-12-01

    This paper presents a new experimental approach for determining the individual optical characteristics of reduced heme a in bovine heart cytochrome c oxidase starting from a small selective shift of the heme a absorption spectrum induced by calcium ions. The difference spectrum induced by Ca2+ corresponds actually to a first derivative (differential) of the heme a(2+) absolute absorption spectrum. Such an absolute spectrum was obtained for the mixed-valence cyanide complex of cytochrome oxidase (a(2+)a3(3+)-CN) and was subsequently used as a basis spectrum for further procession and modeling. The individual absorption spectrum of the reduced heme a in the Soret region was reconstructed as the integral of the difference spectrum induced by addition of Ca2+. The spectrum of heme a(2+) in the Soret region obtained in this way is characterized by a peak with a maximum at 447 nm and half-width of 17 nm and can be decomposed into two Gaussians with maxima at 442 and 451 nm and half-widths of ~10 nm (589 cm(-1)) corresponding to the perpendicularly oriented electronic π→π* transitions B0x and B0y in the porphyrin ring. The reconstructed spectrum in the Soret band differs significantly from the "classical" absorption spectrum of heme a(2+) originally described by Vanneste (Vanneste, W. H. (1966) Biochemistry, 65, 838-848). The differences indicate that the overall γ-band of heme a(2+) in cytochrome oxidase contains in addition to the B0x and B0y transitions extra components that are not sensitive to calcium ions, or, alternatively, that the Vanneste's spectrum of heme a(2+) contains significant contribution from heme a3(2+). The reconstructed absorption band of heme a(2+) in the α-band with maximum at 605 nm and half-width of 18 nm (850 cm(-1)) corresponds most likely to the individual Q0y transition of heme a, whereas the Q0x transition contributes only weakly to the spectrum.

  12. A Vehicle Management End-to-End Testing and Analysis Platform for Validation of Mission and Fault Management Algorithms to Reduce Risk for NASAs Space Launch System

    NASA Technical Reports Server (NTRS)

    Trevino, Luis; Johnson, Stephen B.; Patterson, Jonathan; Teare, David

    2015-01-01

    The engineering development of the National Aeronautics and Space Administration's (NASA) new Space Launch System (SLS) requires cross discipline teams with extensive knowledge of launch vehicle subsystems, information theory, and autonomous algorithms dealing with all operations from pre-launch through on orbit operations. The nominal and off-nominal characteristics of SLS's elements and subsystems must be understood and matched with the autonomous algorithm monitoring and mitigation capabilities for accurate control and response to abnormal conditions throughout all vehicle mission flight phases, including precipitating safing actions and crew aborts. This presents a large and complex systems engineering challenge, which is being addressed in part by focusing on the specific subsystems involved in the handling of off-nominal mission and fault tolerance with response management. Using traditional model-based system and software engineering design principles from the Unified Modeling Language (UML) and Systems Modeling Language (SysML), the Mission and Fault Management (M&FM) algorithms for the vehicle are crafted and vetted in Integrated Development Teams (IDTs) composed of multiple development disciplines such as Systems Engineering (SE), Flight Software (FSW), Safety and Mission Assurance (S&MA) and the major subsystems and vehicle elements such as Main Propulsion Systems (MPS), boosters, avionics, Guidance, Navigation, and Control (GNC), Thrust Vector Control (TVC), and liquid engines. These model-based algorithms and their development lifecycle from inception through FSW certification are an important focus of SLS's development effort to further ensure reliable detection and response to off-nominal vehicle states during all phases of vehicle operation from pre-launch through end of flight. To test and validate these M&FM algorithms a dedicated test-bed was developed for full Vehicle Management End-to-End Testing (VMET). For addressing fault management (FM

  13. A Vehicle Management End-to-End Testing and Analysis Platform for Validation of Mission and Fault Management Algorithms to Reduce Risk for NASA's Space Launch System

    NASA Technical Reports Server (NTRS)

    Trevino, Luis; Patterson, Jonathan; Teare, David; Johnson, Stephen

    2015-01-01

    integrates specific M&FM algorithms, specialized nominal and off-nominal test cases, and vendor-supplied physics-based launch vehicle subsystem models. Additionally, the team has developed processes for implementing and validating these algorithms for concept validation and risk reduction for the SLS program. The flexibility of the Vehicle Management End-to-end Testbed (VMET) enables thorough testing of the M&FM algorithms by providing configurable suites of both nominal and off-nominal test cases to validate the developed algorithms utilizing actual subsystem models such as MPS. The intent of VMET is to validate the M&FM algorithms and substantiate them with performance baselines for each of the target vehicle subsystems in an independent platform exterior to the flight software development infrastructure and its related testing entities. In any software development process there is inherent risk in the interpretation and implementation of concepts into software through requirements and test cases into flight software compounded with potential human errors throughout the development lifecycle. Risk reduction is addressed by the M&FM analysis group working with other organizations such as S&MA, Structures and Environments, GNC, Orion, the Crew Office, Flight Operations, and Ground Operations by assessing performance of the M&FM algorithms in terms of their ability to reduce Loss of Mission and Loss of Crew probabilities. In addition, through state machine and diagnostic modeling, analysis efforts investigate a broader suite of failure effects and associated detection and responses that can be tested in VMET to ensure that failures can be detected, and confirm that responses do not create additional risks or cause undesired states through interactive dynamic effects with other algorithms and systems. VMET further contributes to risk reduction by prototyping and exercising the M&FM algorithms early in their implementation and without any inherent hindrances such as meeting FSW

  14. SU-E-T-109: Development of An End-To-End Test for the Varian TrueBeamtm with a Novel Multiple-Dosimetric Modality H and N Phantom

    SciTech Connect

    Zakjevskii, V; Knill, C; Rakowski, J; Snyder, M

    2014-06-01

    Purpose: To develop a comprehensive end-to-end test for Varian's TrueBeam linear accelerator for head and neck IMRT using a custom phantom designed to utilize multiple dosimetry devices. Methods: The initial end-to-end test and custom H and N phantom were designed to yield maximum information in anatomical regions significant to H and N plans with respect to: i) geometric accuracy, ii) dosimetric accuracy, and iii) treatment reproducibility. The phantom was designed in collaboration with Integrated Medical Technologies. A CT image was taken with a 1mm slice thickness. The CT was imported into Varian's Eclipse treatment planning system, where OARs and the PTV were contoured. A clinical template was used to create an eight field static gantry angle IMRT plan. After optimization, dose was calculated using the Analytic Anisotropic Algorithm with inhomogeneity correction. Plans were delivered with a TrueBeam equipped with a high definition MLC. Preliminary end-to-end results were measured using film and ion chambers. Ion chamber dose measurements were compared to the TPS. Films were analyzed with FilmQAPro using composite gamma index. Results: Film analysis for the initial end-to-end plan with a geometrically simple PTV showed average gamma pass rates >99% with a passing criterion of 3% / 3mm. Film analysis of a plan with a more realistic, ie. complex, PTV yielded pass rates >99% in clinically important regions containing the PTV, spinal cord and parotid glands. Ion chamber measurements were on average within 1.21% of calculated dose for both plans. Conclusion: trials have demonstrated that our end-to-end testing methods provide baseline values for the dosimetric and geometric accuracy of Varian's TrueBeam system.

  15. Monte Carlo simulations for 20 MV X-ray spectrum reconstruction of a linear induction accelerator

    NASA Astrophysics Data System (ADS)

    Wang, Yi; Li, Qin; Jiang, Xiao-Guo

    2012-09-01

    To study the spectrum reconstruction of the 20 MV X-ray generated by the Dragon-I linear induction accelerator, the Monte Carlo method is applied to simulate the attenuations of the X-ray in the attenuators of different thicknesses and thus provide the transmission data. As is known, the spectrum estimation from transmission data is an ill-conditioned problem. The method based on iterative perturbations is employed to derive the X-ray spectra, where initial guesses are used to start the process. This algorithm takes into account not only the minimization of the differences between the measured and the calculated transmissions but also the smoothness feature of the spectrum function. In this work, various filter materials are put to use as the attenuator, and the condition for an accurate and robust solution of the X-ray spectrum calculation is demonstrated. The influences of the scattering photons within different intervals of emergence angle on the X-ray spectrum reconstruction are also analyzed.

  16. Reconstructing metabolic flux vectors from extreme pathways: defining the alpha-spectrum.

    PubMed

    Wiback, Sharon J; Mahadevan, Radhakrishnan; Palsson, Bernhard Ø

    2003-10-07

    The move towards genome-scale analysis of cellular functions has necessitated the development of analytical (in silico) methods to understand such large and complex biochemical reaction networks. One such method is extreme pathway analysis that uses stoichiometry and thermodynamic irreversibly to define mathematically unique, systemic metabolic pathways. These extreme pathways form the edges of a high-dimensional convex cone in the flux space that contains all the attainable steady state solutions, or flux distributions, for the metabolic network. By definition, any steady state flux distribution can be described as a nonnegative linear combination of the extreme pathways. To date, much effort has been focused on calculating, defining, and understanding these extreme pathways. However, little work has been performed to determine how these extreme pathways contribute to a given steady state flux distribution. This study represents an initial effort aimed at defining how physiological steady state solutions can be reconstructed from a network's extreme pathways. In general, there is not a unique set of nonnegative weightings on the extreme pathways that produce a given steady state flux distribution but rather a range of possible values. This range can be determined using linear optimization to maximize and minimize the weightings of a particular extreme pathway in the reconstruction, resulting in what we have termed the alpha-spectrum. The alpha-spectrum defines which extreme pathways can and cannot be included in the reconstruction of a given steady state flux distribution and to what extent they individually contribute to the reconstruction. It is shown that accounting for transcriptional regulatory constraints can considerably shrink the alpha-spectrum. The alpha-spectrum is computed and interpreted for two cases; first, optimal states of a skeleton representation of core metabolism that include transcriptional regulation, and second for human red blood cell

  17. Weak-lensing Power Spectrum Reconstruction by Counting Galaxies. I. The ABS Method

    NASA Astrophysics Data System (ADS)

    Yang, Xinjuan; Zhang, Jun; Yu, Yu; Zhang, Pengjie

    2017-08-01

    We propose an analytical method of blind separation (ABS) of cosmic magnification from the intrinsic fluctuations of galaxy number density in the observed galaxy number density distribution. The ABS method utilizes the different dependences of the signal (cosmic magnification) and contamination (galaxy intrinsic clustering) on galaxy flux to separate the two. It works directly on the measured cross-galaxy angular power spectra between different flux bins. It determines/reconstructs the lensing power spectrum analytically, without assumptions of galaxy intrinsic clustering and cosmology. It is unbiased in the limit of an infinite number of galaxies. In reality, the lensing reconstruction accuracy depends on survey configurations, galaxy biases, and other complexities due to a finite number of galaxies and the resulting shot noise fluctuations in the cross-galaxy power spectra. We estimate its performance (systematic and statistical errors) in various cases. We find that stage IV dark energy surveys such as Square Kilometre Array and Large Synoptic Survey Telescope are capable of reconstructing the lensing power spectrum at z≃ 1 and {\\ell }≲ 5000 accurately. This lensing reconstruction only requires counting galaxies and is therefore highly complementary to cosmic shear measurement by the same surveys.

  18. Polychromatic sparse image reconstruction and mass attenuation spectrum estimation via B-spline basis function expansion

    SciTech Connect

    Gu, Renliang E-mail: ald@iastate.edu; Dogandžić, Aleksandar E-mail: ald@iastate.edu

    2015-03-31

    We develop a sparse image reconstruction method for polychromatic computed tomography (CT) measurements under the blind scenario where the material of the inspected object and the incident energy spectrum are unknown. To obtain a parsimonious measurement model parameterization, we first rewrite the measurement equation using our mass-attenuation parameterization, which has the Laplace integral form. The unknown mass-attenuation spectrum is expanded into basis functions using a B-spline basis of order one. We develop a block coordinate-descent algorithm for constrained minimization of a penalized negative log-likelihood function, where constraints and penalty terms ensure nonnegativity of the spline coefficients and sparsity of the density map image in the wavelet domain. This algorithm alternates between a Nesterov’s proximal-gradient step for estimating the density map image and an active-set step for estimating the incident spectrum parameters. Numerical simulations demonstrate the performance of the proposed scheme.

  19. Results on the primary CR spectrum and composition reconstructed with the SPHERE-2 detector

    NASA Astrophysics Data System (ADS)

    Antonov, R. A.; Beschapov, S. P.; Bonvech, E. A.; Chernov, D. V.; Dzhatdoev, T. A.; Finger, Mir; Finger, Mix; Galkin, V. I.; Kabanova, N. V.; Petkun, A. S.; Podgrudkov, D. A.; Roganova, T. M.; Shaulov, S. B.; Sysoeva, T. I.

    2013-02-01

    First preliminary results of the balloon-borne experiment SPHERE-2 on the all-nuclei primary cosmic rays (PCR) spectrum and primary composition are presented. The primary spectrum in the energy range 1016-5 · 1017 eV was reconstructed using characteristics of Vavilov-Cherenkov radiation of extensive air showers (EAS), reflected from a snow surface. Several sources of systematic uncertainties of the spectrum were analysed. A method for separation of the primary nuclei' groups based on the lateral distribution function' (LDF) steepness parameter is presented. Preliminary estimate of the mean light nuclei' fraction f30-150 at energies 3 · 1016-1.5 · 1017 eV was performed and yielded f30-150 = (21±11) %.

  20. Breast reconstruction: review of surgical methods and spectrum of imaging findings.

    PubMed

    Pinel-Giroux, Fanny Maud; El Khoury, Mona M; Trop, Isabelle; Bernier, Christina; David, Julie; Lalonde, Lucie

    2013-01-01

    Breast reconstruction after mastectomy is often requested by women with breast cancer who are ineligible for breast-conserving therapy and women with a high genetic risk for breast cancer. Current breast reconstruction techniques are diverse and may involve the use of an autologous tissue flap, a prosthetic implant, or both. Regardless of the technique used, cancer may recur in the reconstructed breast; in addition, in breasts reconstructed with autologous tissue flaps, benign complications such as fat necrosis may occur. To detect breast cancer recurrences at a smaller size than can be appreciated clinically and as early as possible without evidence of metastasis, radiologists must be familiar with the range of normal and abnormal imaging appearances of reconstructed breasts, including features of benign complications as well as those of malignant change. Images representing this spectrum of findings were selected from the clinical records of 119 women who underwent breast magnetic resonance (MR) imaging at the authors' institution between January 2009 and March 2011, after mastectomy and breast reconstruction. In 32 of 37 women with abnormal findings on MR images, only benign changes were found at further diagnostic workup; in the other five, recurrent breast cancer was found at biopsy. Four of the five had been treated initially for invasive carcinoma, and one, for multifocal ductal carcinoma; three of the five were carriers of a BRCA gene mutation. On the basis of these results, the authors suggest that systematic follow-up examinations with breast MR imaging may benefit women with a reconstructed breast and a high risk for breast cancer recurrence.

  1. Treatment of a partially thrombosed giant aneurysm of the vertebral artery by aneurysm trapping and direct vertebral artery-posterior inferior cerebellar artery end-to-end anastomosis: technical case report.

    PubMed

    Benes, Ludwig; Kappus, Christoph; Sure, Ulrich; Bertalanffy, Helmut

    2006-07-01

    The purpose of this article is to focus for the first time on the operative management of a direct vertebral artery (VA)-posterior inferior cerebellar artery (PICA) end-to-end anastomosis in a partially thrombosed giant VA-PICA-complex aneurysm and to underline its usefulness as an additional treatment option. The operative technique of a direct VA-PICA end-to-end anatomosis is described in detail. The VA was entering the large aneurysm sack. Distally, the PICA originated from the aneurysm sack-VA-complex. The donor and recipient vessel were cut close to the aneurysm. Whereas the VA was cut in a straight manner, the PICA was cut at an oblique 45-degree angle to enlarge the vascular end diameter. Vessel ends were flushed with heparinized saline and sutured. The thrombotic material inside the aneurysm sack was removed and the distal VA clipped, leaving the anterior spinal artery and brainstem perforators free. The patient regained consciousness without additional morbidity. Magnetic resonance imaging scans revealed a completely decompressed brainstem without infarction. The postoperative angiograms demonstrated a good filling of the anastomosed PICA. Despite the caliber mistmatch of these two vessels the direct VA-PICA end-to-end anastomosis provides an accurate alternative in addition to other anastomoses and bypass techniques, when donor and recipient vessels are suitable and medullary perforators do not have to be disrupted.

  2. Effects of knee flexion angle and loading conditions on the end-to-end distance of the posterior cruciate ligament: a comparison of the roles of the anterolateral and posteromedial bundles.

    PubMed

    Wang, Joon Ho; Kato, Yuki; Ingham, Sheila J M; Maeyama, Akira; Linde-Rosen, Monica; Smolinski, Patrick; Fu, Freddie H; Harner, Christopher

    2014-12-01

    It is commonly accepted that the anterolateral (AL) bundle of the posterior cruciate ligament (PCL) is tight in flexion and that the posteromedial (PM) bundle is tight in extension. However, a recent in vivo study showed that both bundles were tight in extension. To investigate the effects of knee flexion angle, rotational torque, and anterior/posterior translational force on the end-to-end distance between the femoral and tibial insertion sites of each bundle of the PCL. Descriptive laboratory study. Cadaveric knees (10 specimens) were mounted on a robotic system, and the relative positional data between the femur and tibia were acquired during passive flexion/extension, with an applied 5-N·m rotational torque and an applied 89-N translational force. The bony surface and PCL insertion data were acquired with a 3-dimensional scanner after gross dissection and were superimposed onto the positional data. The end-to-end distance between the 2 PCL insertion sites of the femur and tibia was measured. The end-to-end distance increased from full extension to 90° for both the AL (9.2 ± 1.8 mm; from 30.0 to 39.2 mm) and PM bundles (5.8 ± 2.2 mm; from 32.0 to 37.7 mm). With an internal rotational torque, the end-to-end distance of the PM bundle increased significantly (P < .05) at 0°, 30°, and 60° of knee flexion. Under a posterior translational force at 90° of knee flexion, the length of both bundles increased to their longest measurements (AM bundle: 40.6 ± 4.2 mm; PM bundle: 38.4 ± 3.8 mm). The end-to-end distance of the AL and PM bundles of the PCL increased in flexion, and this pattern was maintained during tests with posterior translational force. The PM bundle was more affected by the rotational torque than was the AL bundle. Both bundles of the PCL may serve a greater functional role in flexion than in extension. The PM bundle might be more important for the control of rotation than the AL bundle. Posterior translation at 90° of knee flexion could be the

  3. Red, Straight, no bends: primordial power spectrum reconstruction from CMB and large-scale structure

    NASA Astrophysics Data System (ADS)

    Ravenni, Andrea; Verde, Licia; Cuesta, Antonio J.

    2016-08-01

    We present a minimally parametric, model independent reconstruction of the shape of the primordial power spectrum. Our smoothing spline technique is well-suited to search for smooth features such as deviations from scale invariance, and deviations from a power law such as running of the spectral index or small-scale power suppression. We use a comprehensive set of the state-of the art cosmological data: Planck observations of the temperature and polarisation anisotropies of the cosmic microwave background, WiggleZ and Sloan Digital Sky Survey Data Release 7 galaxy power spectra and the Canada-France-Hawaii Lensing Survey correlation function. This reconstruction strongly supports the evidence for a power law primordial power spectrum with a red tilt and disfavours deviations from a power law power spectrum including small-scale power suppression such as that induced by significantly massive neutrinos. This offers a powerful confirmation of the inflationary paradigm, justifying the adoption of the inflationary prior in cosmological analyses.

  4. Optimizing end-to-end system performance for millimeter and submillimeter spectroscopy of protostars : wideband heterodyne receivers and sideband-deconvolution techniques for rapid molecular-line surveys

    NASA Astrophysics Data System (ADS)

    Sumner, Matthew Casey

    signal and broader tuning range of the Gunn continue to make it the preferred choice. The receiver and high-resolution spectrometer system were brought into a fully operational state late in 2007, when they were used to perform unbiased molecular-line surveys of several galactic sources, including the Orion KL hot core and a position in the L1157 outflow. In order to analyze these data, a new data pipeline was needed to deconvolve the double-sideband signals from the receiver and to model the molecular spectra. A highly automated sideband-deconvolution system has been created, and spectral-analysis tools are currently being developed. The sideband deconvolution relies on chi-square minimization to determine the optimal single-sideband spectrum in the presence of unknown sideband-gain imbalances and spectral baselines. Analytic results are presented for several different methods of approaching the problem, including direct optimization, nonlinear root finding, and a hybrid approach that utilizes a two-stage process to separate out the relatively weak nonlinearities so that the majority of the parameters can be found with a fast linear solver. Analytic derivations of the Jacobian matrices for all three cases are presented, along with a new Mathematica utility that enables the calculation of arbitrary gradients. The direct-optimization method has been incorporated into software, along with a spectral simulation engine that allows different deconvolution scenarios to be tested. The software has been validated through the deconvolution of simulated data sets, and initial results from L1157 and Orion are presented. Both surveys demonstrate the power of the wideband receivers and improved data pipeline to enable exciting scientific studies. The L1157 survey was completed in only 20 hours of telescope time and offers moderate sensitivity over a > 50-GHz range, from 220 GHz to approximately 270 or 280 GHz. The speed with which this survey was completed implies that the new

  5. Terahertz digital holography using angular spectrum and dual wavelength reconstruction methods.

    PubMed

    Heimbeck, Martin S; Kim, Myung K; Gregory, Don A; Everitt, Henry O

    2011-05-09

    Terahertz digital off-axis holography is demonstrated using a Mach-Zehnder interferometer with a highly coherent, frequency tunable, continuous wave terahertz source emitting around 0.7 THz and a single, spatially-scanned Schottky diode detector. The reconstruction of amplitude and phase objects is performed digitally using the angular spectrum method in conjunction with Fourier space filtering to reduce noise from the twin image and DC term. Phase unwrapping is achieved using the dual wavelength method, which offers an automated approach to overcome the 2π phase ambiguity. Potential applications for nondestructive test and evaluation of visually opaque dielectric and composite objects are discussed. © 2011 Optical Society of America

  6. Reconstruction of a nonminimal coupling theory with scale-invariant power spectrum

    SciTech Connect

    Qiu, Taotao

    2012-06-01

    A nonminimal coupling single scalar field theory, when transformed from Jordan frame to Einstein frame, can act like a minimal coupling one. Making use of this property, we investigate how a nonminimal coupling theory with scale-invariant power spectrum could be reconstructed from its minimal coupling counterpart, which can be applied in the early universe. Thanks to the coupling to gravity, the equation of state of our universe for a scale-invariant power spectrum can be relaxed, and the relation between the parameters in the action can be obtained. This approach also provides a means to address the Big-Bang puzzles and anisotropy problem in the nonminimal coupling model within Jordan frame. Due to the equivalence between the two frames, one may be able to find models that are free of the horizon, flatness, singularity as well as anisotropy problems.

  7. [A Method to Reconstruct Surface Reflectance Spectrum from Multispectral Image Based on Canopy Radiation Transfer Model].

    PubMed

    Zhao, Yong-guang; Ma, Ling-ling; Li, Chuan-rong; Zhu, Xiao-hua; Tang, Ling-li

    2015-07-01

    Due to the lack of enough spectral bands for multi-spectral sensor, it is difficult to reconstruct surface retlectance spectrum from finite spectral information acquired by multi-spectral instrument. Here, taking into full account of the heterogeneity of pixel from remote sensing image, a method is proposed to simulate hyperspectral data from multispectral data based on canopy radiation transfer model. This method first assumes the mixed pixels contain two types of land cover, i.e., vegetation and soil. The sensitive parameters of Soil-Leaf-Canopy (SLC) model and a soil ratio factor were retrieved from multi-spectral data based on Look-Up Table (LUT) technology. Then, by combined with a soil ratio factor, all the parameters were input into the SLC model to simulate the surface reflectance spectrum from 400 to 2 400 nm. Taking Landsat Enhanced Thematic Mapper Plus (ETM+) image as reference image, the surface reflectance spectrum was simulated. The simulated reflectance spectrum revealed different feature information of different surface types. To test the performance of this method, the simulated reflectance spectrum was convolved with the Landsat ETM + spectral response curves and Moderate Resolution Imaging Spectrometer (MODIS) spectral response curves to obtain the simulated Landsat ETM+ and MODIS image. Finally, the simulated Landsat ETM+ and MODIS images were compared with the observed Landsat ETM+ and MODIS images. The results generally showed high correction coefficients (Landsat: 0.90-0.99, MODIS: 0.74-0.85) between most simulated bands and observed bands and indicated that the simulated reflectance spectrum was well simulated and reliable.

  8. Reconstruction of broad features in the primordial spectrum and inflaton potential from Planck

    SciTech Connect

    Hazra, Dhiraj Kumar; Shafieloo, Arman; Smoot, George F. E-mail: arman@apctp.org

    2013-12-01

    With the recently published Cosmic Microwave Background data from Planck we address the optimized binning of the primordial power spectrum. As an important modification to the usual binning of the primordial spectrum, along with the spectral amplitude of the bins, we allow the position of the bins also to vary. This technique enables us to address the location of the possible broad physical features in the primordial spectrum with relatively smaller number of bins compared to the analysis performed earlier. This approach is in fact a reconstruction method looking for broad features in the primordial spectrum and avoiding fitting noise in the data. Performing Markov Chain Monte Carlo analysis we present samples of the allowed primordial spectra with broad features consistent with Planck data. To test how realistic it is to have step-like features in primordial spectrum we revisit an inflationary model, proposed by A. A. Starobinsky which can address the similar features obtained from the binning of the spectrum. Using the publicly available code BINGO, we numerically calculate the local f{sub NL} for this model in equilateral and arbitrary triangular configurations of wavevectors and show that the obtained non-Gaussianity for this model is consistent with Planck results. In this paper we have also considered different spectral tilts at different bins to identify the cosmological scale that the spectral index needs to have a red tilt and it is interesting to report that spectral index cannot be well constrained up to k ≈ 0.01Mpc{sup −1}.

  9. Demonstration of end-to-end cloud-DSL with a PON-based fronthaul supporting 5.76-Gb/s throughput with 48 eCDMA-encoded 1024-QAM discrete multi-tone signals.

    PubMed

    Fang, Liming; Zhou, Lei; Liu, Xiang; Zhang, Xiaofeng; Sui, Meng; Effenberger, Frank; Zhou, Jun

    2015-05-18

    We experimentally demonstrate an end-to-end ultra-broadband cloud-DSL network using passive optical network (PON) based fronthaul with electronic code-division-multiple-access (eCDMA) encoding and decoding. Forty-eight signals that are compliant with the very-high-bit-rate digital subscriber line 2 (VDSL2) standard are transmitted with a record throughput of 5.76 Gb/s over a hybrid link consisting of a 20-km standard single-mode fiber and a 100-m twisted pair.

  10. Diffraction based method to reconstruct the spectrum of the Thomson scattering x-ray source

    NASA Astrophysics Data System (ADS)

    Chi, Zhijun; Yan, Lixin; Zhang, Zhen; Zhou, Zheng; Zheng, Lianmin; Wang, Dong; Tian, Qili; Wang, Wei; Nie, Zan; Zhang, Jie; Du, Yingchao; Hua, Jianfei; Shi, Jiaru; Pai, Chihao; Lu, Wei; Huang, Wenhui; Chen, Huaibi; Tang, Chuanxiang

    2017-04-01

    As Thomson scattering x-ray sources based on the collision of intense laser and relativistic electrons have drawn much attention in various scientific fields, there is an increasing demand for the effective methods to reconstruct the spectrum information of the ultra-short and high-intensity x-ray pulses. In this paper, a precise spectrum measurement method for the Thomson scattering x-ray sources was proposed with the diffraction of a Highly Oriented Pyrolytic Graphite (HOPG) crystal and was demonstrated at the Tsinghua Thomson scattering X-ray source. The x-ray pulse is diffracted by a 15 mm (L) ×15 mm (H)× 1 mm (D) HOPG crystal with 1° mosaic spread. By analyzing the diffraction pattern, both x-ray peak energies and energy spectral bandwidths at different polar angles can be reconstructed, which agree well with the theoretical value and simulation. The higher integral reflectivity of the HOPG crystal makes this method possible for single-shot measurement.

  11. Reconstruction of a broadband spectrum of Alfvénic fluctuations

    SciTech Connect

    Viñas, Adolfo F; Moya, Pablo S.; Maneva, Yana G.; Araneda, Jaime A.

    2014-05-10

    Alfvénic fluctuations in the solar wind exhibit a high degree of velocities and magnetic field correlations consistent with Alfvén waves propagating away and toward the Sun. Two remarkable properties of these fluctuations are the tendencies to have either positive or negative magnetic helicity (–1 ≤ σ {sub m} ≤ +1) associated with either left- or right- topological handedness of the fluctuations and to have a constant magnetic field magnitude. This paper provides, for the first time, a theoretical framework for reconstructing both the magnetic and velocity field fluctuations with a divergence-free magnetic field, with any specified power spectral index and normalized magnetic- and cross-helicity spectrum field fluctuations for any plasma species. The spectrum is constructed in the Fourier domain by imposing two conditions—a divergence-free magnetic field and the preservation of the sense of magnetic helicity in both spaces—as well as using Parseval's theorem for the conservation of energy between configuration and Fourier spaces. Applications to the one-dimensional spatial Alfvénic propagation are presented. The theoretical construction is in agreement with typical time series and power spectra properties observed in the solar wind. The theoretical ideas presented in this spectral reconstruction provide a foundation for more realistic simulations of plasma waves, solar wind turbulence, and the propagation of energetic particles in such fluctuating fields.

  12. Polynomial End-to-End Communication

    DTIC Science & Technology

    1989-08-01

    the "fail-stop model" in [AM88]. As mentioned in the introduction, our motivation here is to deal with networks frequently changing topology. In such...eventually connected edges among nodes. By Q4, there is no cut between the receiver and sender in G’. It is known, from graph theory , that if is there is no...Computing, Toronto, Ontario, Canada, pages 131-148, ACM SIGACT and SIGOPS, ACM, 1988. 22 [AGH89] Baruch Awerbuch, Oded Goldreich, and Amir Herzberg . A

  13. Distributed and End-to-End Testing

    DTIC Science & Technology

    2009-12-01

    TACCOMM Tactical Communications TAS MK-23 Target Acquisition System Mark-23 TPX -42 The Interrogator Set - 42 TR Trouble Report VA Virginia...Automatic Correlation (SGS/AC), Target Acquisition System Mark-23 (TAS MK-23), Interrogator Set ( TPX -42), Integrated Automated Detection and Tracking

  14. Reconstruction of the primordial power spectrum of curvature perturbations using multiple data sets

    NASA Astrophysics Data System (ADS)

    Hunt, Paul; Sarkar, Subir

    2014-01-01

    Detailed knowledge of the primordial power spectrum of curvature perturbations is essential both in order to elucidate the physical mechanism (`inflation') which generated it, and for estimating the cosmological parameters from observations of the cosmic microwave background and large-scale structure. Hence it ought to be extracted from such data in a model-independent manner, however this is difficult because relevant cosmological observables are given by a convolution of the primordial perturbations with some smoothing kernel which depends on both the assumed world model and the matter content of the universe. Moreover the deconvolution problem is ill-conditioned so a regularisation scheme must be employed to control error propagation. We demonstrate that `Tikhonov regularisation' can robustly reconstruct the primordial spectrum from multiple cosmological data sets, a significant advantage being that both its uncertainty and resolution are then quantified. Using Monte Carlo simulations we investigate several regularisation parameter selection methods and find that generalised cross-validation and Mallow's Cp method give optimal results. We apply our inversion procedure to data from the Wilkinson Microwave Anisotropy Probe, other ground-based small angular scale CMB experiments, and the Sloan Digital Sky Survey. The reconstructed spectrum (assuming the standard ΛCDM cosmology) is not scale-free but has an infrared cutoff at klesssim5 × 10-4 Mpc-1 (due to the anomalously low CMB quadrupole) and several features with ~ 2σ significance at k/Mpc-1 ~ 0.0013-0.0025, 0.0362-0.0402 and 0.051-0.056, reflecting the `WMAP glitches'. To test whether these are indeed real will require more accurate data, such as from the Planck satellite and new ground-based experiments.

  15. Reconstruction of the primordial power spectrum of curvature perturbations using multiple data sets

    SciTech Connect

    Hunt, Paul; Sarkar, Subir E-mail: s.sarkar@physics.ox.ac.uk

    2014-01-01

    Detailed knowledge of the primordial power spectrum of curvature perturbations is essential both in order to elucidate the physical mechanism ('inflation') which generated it, and for estimating the cosmological parameters from observations of the cosmic microwave background and large-scale structure. Hence it ought to be extracted from such data in a model-independent manner, however this is difficult because relevant cosmological observables are given by a convolution of the primordial perturbations with some smoothing kernel which depends on both the assumed world model and the matter content of the universe. Moreover the deconvolution problem is ill-conditioned so a regularisation scheme must be employed to control error propagation. We demonstrate that 'Tikhonov regularisation' can robustly reconstruct the primordial spectrum from multiple cosmological data sets, a significant advantage being that both its uncertainty and resolution are then quantified. Using Monte Carlo simulations we investigate several regularisation parameter selection methods and find that generalised cross-validation and Mallow's C{sub p} method give optimal results. We apply our inversion procedure to data from the Wilkinson Microwave Anisotropy Probe, other ground-based small angular scale CMB experiments, and the Sloan Digital Sky Survey. The reconstructed spectrum (assuming the standard ΛCDM cosmology) is not scale-free but has an infrared cutoff at k∼<5 × 10{sup −4} Mpc{sup −1} (due to the anomalously low CMB quadrupole) and several features with ∼ 2σ significance at k/Mpc{sup −1} ∼ 0.0013–0.0025, 0.0362–0.0402 and 0.051–0.056, reflecting the 'WMAP glitches'. To test whether these are indeed real will require more accurate data, such as from the Planck satellite and new ground-based experiments.

  16. A comparative study of red and blue light-emitting diodes and low-level laser in regeneration of the transected sciatic nerve after an end to end neurorrhaphy in rabbits.

    PubMed

    Takhtfooladi, Mohammad Ashrafzadeh; Sharifi, Davood

    2015-12-01

    This study aimed at evaluating the effects of red and blue light-emitting diodes (LED) and low-level laser (LLL) on the regeneration of the transected sciatic nerve after an end-to-end neurorrhaphy in rabbits. Forty healthy mature male New Zealand rabbits were randomly assigned into four experimental groups: control, LLL (680 nm), red LED (650 nm), and blue LED (450 nm). All animals underwent the right sciatic nerve neurotmesis injury under general anesthesia and end-to-end anastomosis. The phototherapy was initiated on the first postoperative day and lasted for 14 consecutive days at the same time of the day. On the 30th day post-surgery, the animals whose sciatic nerves were harvested for histopathological analysis were euthanized. The nerves were analyzed and quantified the following findings: Schwann cells, large myelinic axons, and neurons. In the LLL group, as compared to other groups, an increase in the number of all analyzed aspects was observed with significance level (P < 0.05). This finding suggests that postoperative LLL irradiation was able to accelerate and potentialize the peripheral nerve regeneration process in rabbits within 14 days of irradiation.

  17. Digital reconstruction based on angular spectrum diffraction with the ridge of wavelet transform in holographic phase-contrast microscopy.

    PubMed

    Weng, Jiawen; Zhong, Jiangang; Hu, Cuiying

    2008-12-22

    A numerical reconstruction technique of digital holography based on angular spectrum diffraction by means of the ridge of Gabor wavelet transform (GWT) is presented. Appling the GWT, the object wave can be reconstructed by calculating the wavelet coefficients of the hologram at the ridge of the GWT automatically even if the spectrum of the virtual image is disturbed by the other spectrum. It provides a way to eliminate the effect of the zero-order and the twin-image terms without the spatial filtering. In particular, based on the angular spectrum theory, GWT is applied to the digital holographic phase-contrast microscopy on biological specimens. The theory, the results of a simulation and an experiment of an onion specimen are shown.

  18. Syntheses, structures, and magnetic properties of three one-dimensional end-to-end azide/cyanate-bridged copper(II) compounds exhibiting ferromagnetic interaction: new type of solid state isomerism.

    PubMed

    Sasmal, Sujit; Sarkar, Sohini; Aliaga-Alcalde, Núria; Mohanta, Sasankasekhar

    2011-06-20

    The work in this paper presents the syntheses, structures, and magnetic properties of three end-to-end (EE) azide/cyanate-bridged copper(II) compounds [Cu(II)L(1)(μ(1,3)-NCO)](n)·2nH(2)O (1), [Cu(II)L(1)(μ(1,3)-N(3))](n)·2nH(2)O (2), and [Cu(II)L(2)(μ(1,3)-N(3))](n) (3), where the ligands used to achieve these species, HL(1) and HL(2), are the tridentate Schiff base ligands obtained from [1 + 1] condensations of salicylaldehyde with 4-(2-aminoethyl)-morpholine and 3-methoxy salicylaldehyde with 1-(2-aminoethyl)-piperidine, respectively. Compounds 1 and 2 crystallize in the monoclinic P2(1)/c space group, while compound 3 crystallizes in the orthorhombic Pbca space group. The metal center in 1-3 is in all cases pentacoordinated. Three coordination positions of the metal center in 1, 2, or 3 are satisfied by the phenoxo oxygen atom, imine nitrogen atom, and morpholine (for 1 and 2) or piperidine (for 3) nitrogen atom of one deprotonated ligand, [L(1)](-) or [L(2)](-). The remaining two coordination positions are satisfied by two nitrogen atoms of two end-to-end bridging azide ligands for 2 and 3 and one nitrogen atom and one oxygen atom of two end-to-end bridging cyanate ligands for 1. The coordination geometry of the metal ion is distorted square pyramidal in which one EE azide/cyanate occupies the apical position. Variable-temperature (2-300 K) magnetic susceptibilities of 1-3 have been measured under magnetic fields of 0.05 (from 2 to 30 K) and 1.0 T (from 30 to 300 K). The simulation reveals a ferromagnetic interaction in all three compounds with J values of +0.19 ± 0.01, +0.79 ± 0.01, and +1.25 ± 0.007 cm(-1) for 1, 2, and 3, respectively. Compound 1 is the sole example of a ferromagnetically coupled EE cyanate-bridged 1-D copper(II) system. In addition, a rare example of supramolecular isomerism and a nice example of magnetic isomerism have been observed and most interestingly a new type of solid state isomerism has emerged as a result of the comparison

  19. Rutile TiO2(011)-2 × 1 Reconstructed Surfaces with Optical Absorption over the Visible Light Spectrum.

    PubMed

    Zhou, Rulong; Li, Dongdong; Qu, Bingyan; Sun, Xiaorui; Zhang, Bo; Zeng, Xiao Cheng

    2016-10-12

    The stable structures of the reconstructed rutile TiO2(011) surface are explored based on an evolutionary method. In addition to the well-known "brookite(001)-like" 2 × 1 reconstruction model, three 2 × 1 reconstruction structures are revealed for the first time, all being more stable in the high Ti-rich condition. Importantly, the predicted Ti4O4-2 × 1 surface model not only is in excellent agreement with the reconstructed metastable surface detected by Tao et al. [Nat. Chem. 3, 296 (2011)] from their STM experiment but also gives a consistent formation mechanism and electronic structures with the measured surface. The computed imaginary part of the dielectric function suggests that the newly predicted reconstructed surfaces are capable of optical absorption over the entire visible light spectrum, thereby offering high potential for photocatalytic applications.

  20. Unmanned Aircraft Systems Detect and Avoid System: End-to-End Verification and Validation Simulation Study of Minimum Operations Performance Standards for Integrating Unmanned Aircraft into the National Airspace System

    NASA Technical Reports Server (NTRS)

    Ghatas, Rania W.; Jack, Devin P.; Tsakpinis, Dimitrios; Sturdy, James L.; Vincent, Michael J.; Hoffler, Keith D.; Myer, Robert R.; DeHaven, Anna M.

    2017-01-01

    As Unmanned Aircraft Systems (UAS) make their way to mainstream aviation operations within the National Airspace System (NAS), research efforts are underway to develop a safe and effective environment for their integration into the NAS. Detect and Avoid (DAA) systems are required to account for the lack of "eyes in the sky" due to having no human on-board the aircraft. The technique, results, and lessons learned from a detailed End-to-End Verification and Validation (E2-V2) simulation study of a DAA system representative of RTCA SC-228's proposed Phase I DAA Minimum Operational Performance Standards (MOPS), based on specific test vectors and encounter cases, will be presented in this paper.

  1. Efficacy and safety of a NiTi CAR 27 compression ring for end-to-end anastomosis compared with conventional staplers: A real-world analysis in Chinese colorectal cancer patients.

    PubMed

    Lu, Zhenhai; Peng, Jianhong; Li, Cong; Wang, Fulong; Jiang, Wu; Fan, Wenhua; Lin, Junzhong; Wu, Xiaojun; Wan, Desen; Pan, Zhizhong

    2016-05-01

    This study aimed to evaluate the safety and efficacy of a new nickel-titanium shape memory alloy compression anastomosis ring, NiTi CAR 27, in constructing an anastomosis for colorectal cancer resection compared with conventional staples. In total, 234 consecutive patients diagnosed with colorectal cancer receiving sigmoidectomy and anterior resection for end-to-end anastomosis from May 2010 to June 2012 were retrospectively analyzed. The postoperative clinical parameters, postoperative complications and 3-year overall survival in 77 patients using a NiTi CAR 27 compression ring (CAR group) and 157 patients with conventional circular staplers (STA group) were compared. There were no statistically significant differences between the patients in the two groups in terms of general demographics and tumor features. A clinically apparent anastomotic leak occurred in 2 patients (2.6%) in the CAR group and in 5 patients (3.2%) in the STA group (p=0.804). These eight patients received a temporary diverting ileostomy. One patient (1.3%) in the CAR group was diagnosed with anastomotic stricture through an electronic colonoscopy after 3 months postoperatively. The incidence of postoperative intestinal obstruction was comparable between the two groups (p=0.192). With a median follow-up duration of 39.6 months, the 3-year overall survival rate was 83.1% in the CAR group and 89.0% in the STA group (p=0.152). NiTi CAR 27 is safe and effective for colorectal end-to-end anastomosis. Its use is equivalent to that of the conventional circular staplers. This study suggests that NiTi CAR 27 may be a beneficial alternative in colorectal anastomosis in Chinese colorectal cancer patients.

  2. Safety and efficacy of the NiTi Shape Memory Compression Anastomosis Ring (CAR/ColonRing) for end-to-end compression anastomosis in anterior resection or low anterior resection.

    PubMed

    Kang, Jeonghyun; Park, Min Geun; Hur, Hyuk; Min, Byung Soh; Lee, Kang Young; Kim, Nam Kyu

    2013-04-01

    Compression anastomoses may represent an improvement over traditional hand-sewn or stapled techniques. This prospective exploratory study aimed to assess the efficacy and complication rates in patients undergoing anterior resection (AR) or low anterior resection (LAR) anastomosed with a novel end-to-end compression anastomosis ring, the ColonRing. In all, 20 patients (13 male) undergoing AR or LAR were enrolled to be anastomosed using the NiTi Shape Memory End-to-End Compression Anastomosis Ring (NiTi Medical Technologies Ltd, Netanya, Israel). Demographic, intraoperative, and postoperative data were collected. Patients underwent AR (11/20) or LAR using laparoscopy (75%), robotic (10%) surgery, or an open laparotomy (15%) approach, with a median anastomotic level of 14.5 cm (range, 4-25 cm). Defunctioning loop ileostomies were formed in 6 patients for low anastomoses. Surgeons rated the ColonRing device as either easy or very easy to use. One patient developed an anastomotic leakage in the early postoperative period; there were no late postoperative complications. Mean time to passage of first flatus and commencement of oral fluids was 2.5 days and 3.2 days, respectively. Average hospital stay was 12.6 days (range, 8-23 days). Finally, the device was expelled on average 15.3 days postoperatively without difficulty. This is the first study reporting results in a significant number of LAR patients and the first reported experience from South Korea; it shows that the compression technique is surgically feasible, easy to use, and without significant complication rates. A large randomized controlled trial is warranted to investigate the benefits of the ColonRing over traditional stapling techniques.

  3. Reconstruction of the Primary Energy Spectrum from Fluorescence Telescope Data of the Pierre Auger Observatory

    NASA Astrophysics Data System (ADS)

    Geenen, H.

    2007-07-01

    The Pierre Auger Observatory is the largest extensive air-shower (EAS) experiment in operation. It is still being constructed, and the final configuration will have detectors at the two sites Argentina and USA observing both celestial hemispheres. The aim of the experiment is to determine the energy, composition and origin of ultra-high energy cosmic-rays (UHECR) using two complementary detection techniques. The detector at the southern site presently contains more than 1400 (Jul. 2007) water-Cherenkov detectors at ground level (870 gcm^-2). Completion of the 3000 km^2 large detector array is expected by the end of 2007 with finally more than 1600 tanks. The atmosphere above the site is observed by 24 fluorescence telescopes located in four buildings at the boundary of the array. During clear moon-less nights, this configuration permits hybrid measurement of both longitudinal development of an EAS and lateral particle density at ground. All fluorescence telescopes are fully operational since February 2007. The aim of this work is to reconstruct the cosmic ray energy spectrum between a few 10^17 eV up to 10^20 eV. This would provide an overlap to spectral results from other experiments at lower energies. The hybrid detection provides an accurate geometry determination and thereby a good energy resolution. However, the energy threshold is limited to the threshold of the surface array: larger than a few 10^18 eV. The advantage of FD-monocular events (FD-mono) is a lower energy threshold in the aimed 10^17 eV regime. In addition, the present FD-mono exposure is about 1.5 times larger than the hybrid one. However, the energy resolution of FD-mono events is worse compared to hybrid, and the detector acceptance is strongly energy dependent. Therefore, the determination of the energy spectrum requires an unfolding procedure, which considers both the limited acceptance and the limited resolution. In this analysis the FD-mono data are reconstructed. The reconstruction

  4. Modified Reconstruction of Neutron Spectrum Emitted in Dense Plasma Focus Devices by MCNP Code and Monte-Carlo Method

    NASA Astrophysics Data System (ADS)

    Roomi, A.; Habibi, M.; Saion, E.; Amrollahi, R.

    2011-02-01

    In this study we present Monte Carlo method for obtaining the time-resolved energy spectra of neutrons emitted by D-D reaction in plasma focus devices. Angular positions of detectors obtained to maximum reconstruction of neutron spectrum. The detectors were arranged over a range of 0-22.5 m from the source and also at 0°, 30°, 60°, and 90° with respect to the central axis. The results show that an arrangement with five detectors placed at 0, 2, 7.5, 15 and 22.5 m around the central electrode of plasma focus as an anisotropic neutron source is required. As it shown in reconstructed spectrum, the distance between the neutron source and detectors is reduced and also the final reconstructed signal obtained with a very fine accuracy.

  5. [Novel method of noise power spectrum measurement for computed tomography images with adaptive iterative reconstruction method].

    PubMed

    Nishimaru, Eiji; Ichikawa, Katsuhiro; Hara, Takanori; Terakawa, Shoichi; Yokomachi, Kazushi; Fujioka, Chikako; Kiguchi, Masao; Ishifuro, Minoru

    2012-01-01

    Adaptive iterative reconstruction techniques (IRs) can decrease image noise in computed tomography (CT) and are expected to contribute to reduction of the radiation dose. To evaluate the performance of IRs, the conventional two-dimensional (2D) noise power spectrum (NPS) is widely used. However, when an IR provides an NPS value drop at all spatial frequency (which is similar to NPS changes by dose increase), the conventional method cannot evaluate the correct noise property because the conventional method does not correspond to the volume data natures of CT images. The purpose of our study was to develop a new method for NPS measurements that can be adapted to IRs. Our method utilized thick multi-planar reconstruction (MPR) images. The thick images are generally made by averaging CT volume data in a direction perpendicular to a MPR plane (e.g. z-direction for axial MPR plane). By using this averaging technique as a cutter for 3D-NPS, we can obtain adequate 2D-extracted NPS (eNPS) from 3D NPS. We applied this method to IR images generated with adaptive iterative dose reduction 3D (AIDR-3D, Toshiba) to investigate the validity of our method. A water phantom with 24 cm-diameters was scanned at 120 kV and 200 mAs with a 320-row CT (Acquilion One, Toshiba). From the results of study, the adequate thickness of MPR images for eNPS was more than 25.0 mm. Our new NPS measurement method utilizing thick MPR images was accurate and effective for evaluating noise reduction effects of IRs.

  6. Geomagnetic Reconstruction in Gaps of Solar Wind Parameters by Singular Spectrum Analysis

    NASA Astrophysics Data System (ADS)

    Kondrashov, Dmitri; Shprits, Yuri; Kellerman, Adam; Ghil, Michael

    2013-04-01

    The main historical — i.e., pre-1994 — solar-wind and interplanetary magnetic field (IMF) observations come from measurements taken on board of the IMP-8 spacecraft. While the spacecraft crossed the magnetosheath and magnetosphere, it was not immersed in the solar wind at all times, and so large continuous gaps exist in the collected data. Even after 1994 there have been many data gaps in the solar wind data, though they are not as frequent and are usually shorter. The behavior of Earth's magnetosphere is strongly influenced by the solar wind. Various geomagnetic indices — such as Kp, Dst or AE —are inferred from ground-measured, and hence time-lagged magnetic disturbances that are caused by the magnetosphere's interaction with the solar wind and the embedded IMF; these indices are inferred from the ground and are typically available continuously in time, even when solar-wind data are not. Broadly speaking, these indices can be considered as a proxy for the overall time-lagged magnetospheric response to the solar driver, i.e., to the solar wind and IMF. We will demonstrate how to reconstruct data in the gaps of the solar driver by using smooth spatio-temporal modes of co-variability inferred by singular spectrum analysis (SSA) from time-lagged correlations in multivariate data consisting of gappy-driver (solar wind and IMF) and continuous-response records (various geomagnetic indices),— while discarding the noise. Application of the reconstructed data to radiation belts modeling will be presented.

  7. SU-F-P-37: Implementation of An End-To-End QA Test of the Radiation Therapy Imaging, Planning and Delivery Process to Identify and Correct Possible Sources of Deviation

    SciTech Connect

    Salinas Aranda, F; Suarez, V; Arbiser, S; Sansogne, R

    2016-06-15

    Purpose: To implement an end-to-end QA test of the radiation therapy imaging, planning and delivery process, aimed to assess the dosimetric agreement accuracy between planned and delivered treatment, in order to identify and correct possible sources of deviation. To establish an internal standard for machine commissioning acceptance. Methods: A test involving all steps of the radiation therapy: imaging, planning and delivery process was designed. The test includes analysis of point dose and planar dose distributions agreement between TPS calculated and measured dose. An ad hoc 16 cm diameter PMMA phantom was constructed with one central and four peripheral bores that can accommodate calibrated electron density inserts. Using Varian Eclipse 10.0 and Elekta XiO 4.50 planning systems, IMRT, RapidArc and 3DCRT with hard and dynamic wedges plans were planned on the phantom and tested. An Exradin A1SL chamber is used with a Keithley 35617EBS electrometer for point dose measurements in the phantom. 2D dose distributions were acquired using MapCheck and Varian aS1000 EPID.Gamma analysis was performed for evaluation of 2D dose distribution agreement using MapCheck software and Varian Portal Dosimetry Application.Varian high energy Clinacs Trilogy, 2100C/CD, 2000CR and low energy 6X/EX where tested.TPS-CT# vs. electron density table were checked for CT-scanners used. Results: Calculated point doses were accurate to 0.127% SD: 0.93%, 0.507% SD: 0.82%, 0.246% SD: 1.39% and 0.012% SD: 0.01% for LoX-3DCRT, HiX-3DCRT, IMRT and RapidArc plans respectively. Planar doses pass gamma 3% 3mm in all cases and 2% 2mm for VMAT plans. Conclusion: Implementation of a simple and reliable quality assurance tool was accomplished. The end-to-end proved efficient, showing excellent agreement between planned and delivered dose evidencing strong consistency of the whole process from imaging through planning to delivery. This test can be used as a first step in beam model acceptance for clinical

  8. Experimental demonstration of a record high 11.25Gb/s real-time optical OFDM transceiver supporting 25km SMF end-to-end transmission in simple IMDD systems.

    PubMed

    Giddings, R P; Jin, X Q; Hugues-Salas, E; Giacoumidis, E; Wei, J L; Tang, J M

    2010-03-15

    The fastest ever 11.25Gb/s real-time FPGA-based optical orthogonal frequency division multiplexing (OOFDM) transceivers utilizing 64-QAM encoding/decoding and significantly improved variable power loading are experimentally demonstrated, for the first time, incorporating advanced functionalities of on-line performance monitoring, live system parameter optimization and channel estimation. Real-time end-to-end transmission of an 11.25Gb/s 64-QAM-encoded OOFDM signal with a high electrical spectral efficiency of 5.625bit/s/Hz over 25km of standard and MetroCor single-mode fibres is successfully achieved with respective power penalties of 0.3dB and -0.2dB at a BER of 1.0 x 10(-3) in a directly modulated DFB laser-based intensity modulation and direct detection system without in-line optical amplification and chromatic dispersion compensation. The impacts of variable power loading as well as electrical and optical components on the transmission performance of the demonstrated transceivers are experimentally explored in detail. In addition, numerical simulations also show that variable power loading is an extremely effective means of escalating system performance to its maximum potential.

  9. Single-fraction spine SBRT end-to-end testing on TomoTherapy, Vero, TrueBeam, and CyberKnife treatment platforms using a novel anthropomorphic phantom.

    PubMed

    Gallo, John J; Kaufman, Isaac; Powell, Rachel; Pandya, Shalini; Somnay, Archana; Bossenberger, Todd; Ramirez, Ezequiel; Reynolds, Robert; Solberg, Timothy; Burmeister, Jay

    2015-01-08

    Spine SBRT involves the delivery of very high doses of radiation to targets adjacent to the spinal cord and is most commonly delivered in a single fraction. Highly conformal planning and accurate delivery of such plans is imperative for successful treatment without catastrophic adverse effects. End-to-end testing is an important practice for evaluating the entire treatment process from simulation through treatment delivery. We performed end-to-end testing for a set of representative spine targets planned and delivered using four different treatment planning systems (TPSs) and delivery systems to evaluate the various capabilities of each. An anthropomorphic E2E SBRT phantom was simulated and treated on each system to evaluate agreement between measured and calculated doses. The phantom accepts ion chambers in the thoracic region and radiochromic film in the lumbar region. Four representative targets were developed within each region (thoracic and lumbar) to represent different presentations of spinal metastases and planned according to RTOG 0631 constraints. Plans were created using the TomoTherapy TPS for delivery using the Hi·Art system, the iPlan TPS for delivery using the Vero system, the Eclipse TPS for delivery using the TrueBeam system in both flattened and flattening filter free (FFF), and the MultiPlan TPS for delivery using the CyberKnife system. Delivered doses were measured using a 0.007 cm3 ion chamber in the thoracic region and EBT3 GAFCHROMIC film in the lumbar region. Films were scanned and analyzed using an Epson Expression 10000XL flatbed scanner in conjunction with FilmQAPro2013. All treatment platforms met all dose constraints required by RTOG 0631. Ion chamber measurements in the thoracic targets delivered an overall average difference of 1.5%. Specifically, measurements agreed with the TPS to within 2.2%, 3.2%, 1.4%, 3.1%, and 3.0% for all three measureable cases on TomoTherapy, Vero, TrueBeam (FFF), TrueBeam (flattened), and Cyber

  10. Experimental demonstration of record high 19.125 Gb/s real-time end-to-end dual-band optical OFDM transmission over 25 km SMF in a simple EML-based IMDD system.

    PubMed

    Giddings, R P; Hugues-Salas, E; Tang, J M

    2012-08-27

    Record high 19.125 Gb/s real-time end-to-end dual-band optical OFDM (OOFDM) transmission is experimentally demonstrated, for the first time, in a simple electro-absorption modulated laser (EML)-based 25 km standard SMF system using intensity modulation and direct detection (IMDD). Adaptively modulated baseband (0-2GHz) and passband (6.125 ± 2GHz) OFDM RF sub-bands, supporting line rates of 10 Gb/s and 9.125 Gb/s respectively, are independently generated and detected with FPGA-based DSP clocked at only 100 MHz and DACs/ADCs operating at sampling speeds as low as 4GS/s. The two OFDM sub-bands are electrically frequency-division-multiplexed (FDM) for intensity modulation of a single optical carrier by an EML. To maximize and balance the signal transmission performance of each sub-band, on-line adaptive features and on-line performance monitoring is fully exploited to optimize key OOFDM transceiver and system parameters, which includes subcarrier characteristics within each individual OFDM sub-band, total and relative sub-band power as well as EML operating conditions. The achieved 19.125 Gb/s over 25 km SMF OOFDM transmission system has an optical power budget of 13.5 dB, and shows almost identical bit error rate (BER) performances for both the baseband and passband signals. In addition, experimental investigations also indicate that the maximum achievable transmission capacity of the present system is mainly determined by the EML frequency chirp-enhanced chromatic dispersion effect, and the passband BER performance is not affected by the two sub-band-induced intermixing effect, which, however, gives a 1.2dB optical power penalty to the baseband signal transmission.

  11. Direct evidence for the occurrence of simple microtubule organizing centers (MTOCs) and for end-to-end joining of microtubules with modified ends in the reticulopodia of Allogromia laticollaris (foraminifera).

    PubMed

    Golz, R; Hauser, M

    1991-11-29

    The partial disassembly of filopodial microtubules into helical filaments, respectively the reassembly from paracrystals of exactly registered tubulin helices was recognized as a special adaptation to the highly dynamic reticulopodial movements in the foraminifer Allogromia laticollaris [4, 16]. Electron microscopic investigations of partially extracted or completely lysed filopodial strands revealed some additional adaptations to the local tubulin demands within the widely spread, rapidly changing reticulopodial networks. As probable foci for the initiation of additional microtubules from pools of tubulin during the netto growth phase, small (40 × 60 nm) cube-shaped, electron dense bodies were discovered which could act as mobile MTOCs at very distant sites from the metabolically active cell body within the reticulopodial system. The microtubule ends, proximally as well as distally to the filopodial origins, are characterized by a closed appearance because of a terminal cap which is continuous with the microtubule wall, whereas some other microtubules appear as the usual open cylinders. It is suggested that the closed ends, which occur either freely or decorated by the cube-shaped, electron dense bodies, may play a role in the de novo initiation of microtubules as well as in the transformation to the helical state or vice versa. Points of discontinuity within single longitudinally cut microtubules can be observed directly by electron microscopy and correspond to end-to-end contacts of closed MT-terminations. These junctions probably represent initial contact points of an annealing process between adjacent shorter MT-segments. Microtubule annealing occurs rapidly in vitro [14, 15] and could explain the elongation rates observed during filopodial outgrowth. Copyright © 1991 Gustav Fischer Verlag · Stuttgart · Jena · New York. Published by Elsevier GmbH.. All rights reserved.

  12. A noise power spectrum study of a new model-based iterative reconstruction system: Veo 3.0.

    PubMed

    Li, Guang; Liu, Xinming; Dodge, Cristina T; Jensen, Corey T; Rong, X John

    2016-09-08

    The purpose of this study was to evaluate performance of the third generation of model-based iterative reconstruction (MBIR) system, Veo 3.0, based on noise power spectrum (NPS) analysis with various clinical presets over a wide range of clinically applicable dose levels. A CatPhan 600 surrounded by an oval, fat-equivalent ring to mimic patient size/shape was scanned 10 times at each of six dose levels on a GE HD 750 scanner. NPS analysis was performed on images reconstructed with various Veo 3.0 preset combinations for comparisons of those images reconstructed using Veo 2.0, filtered back projection (FBP) and adaptive statistical iterative reconstruc-tion (ASiR). The new Target Thickness setting resulted in higher noise in thicker axial images. The new Texture Enhancement function achieved a more isotropic noise behavior with less image artifacts. Veo 3.0 provides additional reconstruction options designed to allow the user choice of balance between spatial resolution and image noise, relative to Veo 2.0. Veo 3.0 provides more user selectable options and in general improved isotropic noise behavior in comparison to Veo 2.0. The overall noise reduction performance of both versions of MBIR was improved in comparison to FBP and ASiR, especially at low-dose levels.

  13. Reconstruction of the first-derivative EPR spectrum from multiple harmonics of the field-modulated continuous wave signal.

    PubMed

    Tseitlin, Mark; Eaton, Sandra S; Eaton, Gareth R

    2011-04-01

    Selection of the amplitude of magnetic field modulation for continuous wave electron paramagnetic resonance (EPR) often is a trade-off between sensitivity and resolution. Increasing the modulation amplitude improves the signal-to-noise ratio, S/N, at the expense of broadening the signal. Combining information from multiple harmonics of the field-modulated signal is proposed as a method to obtain the first derivative spectrum with minimal broadening and improved signal-to-noise. The harmonics are obtained by digital phase-sensitive detection of the signal at the modulation frequency and its integer multiples. Reconstruction of the first-derivative EPR line is done in the Fourier conjugate domain where each harmonic can be represented as the product of the Fourier transform of the 1st derivative signal with an analytical function. The analytical function for each harmonic can be viewed as a filter. The Fourier transform of the 1st derivative spectrum can be calculated from all available harmonics by solving an optimization problem with the goal of maximizing the S/N. Inverse Fourier transformation of the result produces the 1st derivative EPR line in the magnetic field domain. The use of modulation amplitude greater than linewidth improves the S/N, but does not broaden the reconstructed spectrum. The method works for an arbitrary EPR line shape, but is limited to the case when magnetization instantaneously follows the modulation field, which is known as the adiabatic approximation. Copyright © 2011 Elsevier Inc. All rights reserved.

  14. Reconstruction of the first derivative EPR spectrum from multiple harmonics of the field-modulated continuous wave signal

    PubMed Central

    Tseitlin, Mark; Eaton, Sandra S.; Eaton, Gareth R.

    2011-01-01

    Selection of the amplitude of magnetic field modulation for continuous wave electron paramagnetic resonance (EPR) often is a trade-off between sensitivity and resolution. Increasing the modulation amplitude improves the signal-to-noise ratio, S/N, at the expense of broadening the signal. Combining information from multiple harmonics of the field-modulated signal is proposed as a method to obtain the first derivative spectrum with minimal broadening and improved signal-to-noise. The harmonics are obtained by digital phase-sensitive detection of the signal at the modulation frequency and its integer multiples. Reconstruction of the first derivative EPR line is done in the Fourier conjugate domain where each harmonic can be represented as the product of the Fourier transform of the 1st derivative signal with an analytical function. The analytical function for each harmonic can be viewed as a filter. The Fourier transform of the 1st derivative spectrum can be calculated from all available harmonics by solving an optimization problem with the goal of maximizing the S/N. Inverse Fourier transformation of the result produces the 1st derivative EPR line in the magnetic field domain. The use of modulation amplitude greater than linewidth improves the S/N, but does not broaden the reconstructed spectrum. The method works for an arbitrary EPR line shape, but is limited to the case when magnetization instantaneously follows the modulation field, which is known as the adiabatic approximation. PMID:21349750

  15. The Dosimetric Importance of Six Degree of Freedom Couch End to End Quality Assurance for SRS/SBRT Treatments when Comparing Intensity Modulated Radiation Therapy to Volumetric Modulated Arc Therapy

    NASA Astrophysics Data System (ADS)

    Ulizio, Vincent Michael

    With the advancement of technology there is an increasing ability for lesions to be treated with higher radiation doses each fraction. This also allows for low fractionated treatments. Because the patient is receiving a higher dose of radiation per fraction and because of the fast dose falloff in these targets there must be extreme accuracy in the delivery. The 6 DOF couch allows for extra rotational corrections and for a more accurate set-up. The movement of the couch needs to be verified to be accurate and because of this, end to end quality assurance tests for the couch have been made. After the set-up is known to be accurate then different treatment techniques can be studied. SBRT of the Spine has a very fast dose falloff near the spinal cord and was typically treated with IMRT. Treatment plans generated using this technique tend to have streaks of low dose radiation, so VMAT is being studied to determine if this treatment technique can reduce the low dose radiation volume as well as improve OAR sparing. For the 6 DOF couch QA, graph paper is placed on the anterior and right lateral sides of the VisionRT OSMS Cube Phantom. Each rotational shift is then applied individually, with a 3 degree shift in the positive and negative directions for pitch and roll. A mark is drawn on the paper to record each shift. A CBCT is then taken of the Cube and known shifts are applied and then an additional CBCT is taken to return the Cube to isocenter. The original IMRT plans for SBRT of the Spine are evaluated and then a plan is made utilizing VMAT. These plans are then compared for low dose radiation, OAR sparing, and conformity. If the original IMRT plan is determined to be an inferior treatment to what is acceptable, then this will be re-planned and compared to the VMAT plan. The 6 DOF couch QA tests have proven to be accurate and reproducible. The average deviations in the 3 degree and -3 degree pitch and roll directions were 0.197, 0.068, 0.091, and 0.110 degrees

  16. TOWARD END-TO-END MODELING FOR NUCLEAR EXPLOSION MONITORING: SIMULATION OF UNDERGROUND NUCLEAR EXPLOSIONS AND EARTHQUAKES USING HYDRODYNAMIC AND ANELASTIC SIMULATIONS, HIGH-PERFORMANCE COMPUTING AND THREE-DIMENSIONAL EARTH MODELS

    SciTech Connect

    Rodgers, A; Vorobiev, O; Petersson, A; Sjogreen, B

    2009-07-06

    This paper describes new research being performed to improve understanding of seismic waves generated by underground nuclear explosions (UNE) by using full waveform simulation, high-performance computing and three-dimensional (3D) earth models. The goal of this effort is to develop an end-to-end modeling capability to cover the range of wave propagation required for nuclear explosion monitoring (NEM) from the buried nuclear device to the seismic sensor. The goal of this work is to improve understanding of the physical basis and prediction capabilities of seismic observables for NEM including source and path-propagation effects. We are pursuing research along three main thrusts. Firstly, we are modeling the non-linear hydrodynamic response of geologic materials to underground explosions in order to better understand how source emplacement conditions impact the seismic waves that emerge from the source region and are ultimately observed hundreds or thousands of kilometers away. Empirical evidence shows that the amplitudes and frequency content of seismic waves at all distances are strongly impacted by the physical properties of the source region (e.g. density, strength, porosity). To model the near-source shock-wave motions of an UNE, we use GEODYN, an Eulerian Godunov (finite volume) code incorporating thermodynamically consistent non-linear constitutive relations, including cavity formation, yielding, porous compaction, tensile failure, bulking and damage. In order to propagate motions to seismic distances we are developing a one-way coupling method to pass motions to WPP (a Cartesian anelastic finite difference code). Preliminary investigations of UNE's in canonical materials (granite, tuff and alluvium) confirm that emplacement conditions have a strong effect on seismic amplitudes and the generation of shear waves. Specifically, we find that motions from an explosion in high-strength, low-porosity granite have high compressional wave amplitudes and weak shear

  17. Study and Implementation of the End-to-End Data Pipeline for the Virtis Imaging Spectrometer Onbaord Venus Express: "From Science Operations Planning to Data Archiving and Higher Lever Processing"

    NASA Astrophysics Data System (ADS)

    Cardesín Moinelo, Alejandro

    2010-04-01

    This PhD Thesis describes the activities performed during the Research Program undertaken for two years at the Istituto Nazionale di AstroFisica in Rome, Italy, as active member of the VIRTIS Technical and Scientific Team, and one additional year at the European Space Astronomy Center in Madrid, Spain, as member of the Mars Express Science Ground Segment. This document will show a study of all sections of the Science Ground Segment of the Venus Express mission, from the planning of the scientific operations, to the generation, calibration and archiving of the science data, including the production of valuable high level products. We will present and discuss here the end-to-end diagram of the ground segment from the technical and scientific point of view, in order to describe the overall flow of information: from the original scientific requests of the principal investigator and interdisciplinary teams, up to the spacecraft, and down again for the analysis of the measurements and interpretation of the scientific results. These scientific results drive to new and more elaborated scientific requests, which are used as feedback to the planning cycle, closing the circle. Special attention is given here to describe the implementation and development of the data pipeline for the VIRTIS instrument onboard Venus Express. During the research program, both the raw data generation pipeline and the data calibration pipeline were developed and automated in order to produce the final raw and calibrated data products from the input telemetry of the instrument. The final raw and calibrated products presented in this work are currently being used by the VIRTIS Science team for data analysis and are distributed to the whole scientific community via the Planetary Science Archive. More than 20,000 raw data files and 10,000 calibrated products have already been generated after almost 4 years of mission. In the final part of the Thesis, we will also present some high level data

  18. The Study of Spectrum Reconstruction Based on Fuzzy Set Full Constraint and Multiendmember Decomposition

    NASA Astrophysics Data System (ADS)

    Sun, Y.; Lin, Y.; Hu, X.; Zhao, S.; Liu, S.; Tong, Q.; Helder, D.; Yan, L.

    2017-09-01

    Hyperspectral imaging system can obtain spectral and spatial information simultaneously with bandwidth to the level of 10 nm or even less. Therefore, hyperspectral remote sensing has the ability to detect some kinds of objects which can not be detected in wide-band remote sensing, making it becoming one of the hottest spots in remote sensing. In this study, under conditions with a fuzzy set of full constraints, Normalized Multi-Endmember Decomposition Method (NMEDM) for vegetation, water, and soil was proposed to reconstruct hyperspectral data using a large number of high-quality multispectral data and auxiliary spectral library data. This study considered spatial and temporal variation and decreased the calculation time required to reconstruct the hyper-spectral data. The results of spectral reconstruction based on NMEDM showed that the reconstructed data has good qualities and certain applications, which makes it possible to carry out spectral features identification. This method also extends the application of depth and breadth of remote sensing data, helping to explore the law between multispectral and hyperspectral data.

  19. Effect of moiré superlattice reconstruction in the electronic excitation spectrum of graphene-metal heterostructures

    NASA Astrophysics Data System (ADS)

    Politano, Antonio; Slotman, Guus J.; Roldán, Rafael; Chiarello, Gennaro; Campi, Davide; Katsnelson, Mikhail I.; Yuan, Shengjun

    2017-06-01

    We have studied the electronic excitation spectrum in periodically rippled graphene on Ru(0 0 0 1) and flat, commensurate graphene on Ni(1 1 1) by means of high-resolution electron energy loss spectroscopy and a combination of density functional theory and tight-binding approaches. We show that the periodic moiré superlattice originated by the lattice mismatch in graphene/Ru(0 0 0 1) induces the emergence of an extra mode, which is not present in graphene/Ni(1 1 1). Contrary to the ordinary intra-band plasmon of doped graphene, the extra mode is robust in charge-neutral graphene/metal contacts, having its origin in electron-hole inter-band transitions between van Hove singularities that emerge in the reconstructed band structure, due to the moiré pattern superlattice.

  20. Reconstruction of halo power spectrum from redshift-space galaxy distribution: cylinder-grouping method and halo exclusion effect

    NASA Astrophysics Data System (ADS)

    Okumura, Teppei; Takada, Masahiro; More, Surhud; Masaki, Shogo

    2017-07-01

    The peculiar velocity field measured by redshift-space distortions (RSD) in galaxy surveys provides a unique probe of the growth of large-scale structure. However, systematic effects arise when including satellite galaxies in the clustering analysis. Since satellite galaxies tend to reside in massive haloes with a greater halo bias, the inclusion boosts the clustering power. In addition, virial motions of the satellite galaxies cause a significant suppression of the clustering power due to non-linear RSD effects. We develop a novel method to recover the redshift-space power spectrum of haloes from the observed galaxy distribution by minimizing the contamination of satellite galaxies. The cylinder-grouping method (CGM) we study effectively excludes satellite galaxies from a galaxy sample. However, we find that this technique produces apparent anisotropies in the reconstructed halo distribution over all the scales which mimic RSD. On small scales, the apparent anisotropic clustering is caused by exclusion of haloes within the anisotropic cylinder used by the CGM. On large scales, the misidentification of different haloes in the large-scale structures, aligned along the line of sight, into the same CGM group causes the apparent anisotropic clustering via their cross-correlation with the CGM haloes. We construct an empirical model for the CGM halo power spectrum, which includes correction terms derived using the CGM window function at small scales as well as the linear matter power spectrum multiplied by a simple anisotropic function at large scales. We apply this model to a mock galaxy catalogue at z = 0.5, designed to resemble Sloan Digital Sky Survey-III Baryon Oscillation Spectroscopic Survey (BOSS) CMASS galaxies, and find that our model can predict both the monopole and quadrupole power spectra of the host haloes up to k < 0.5 {{h Mpc^{-1}}} to within 5 per cent.

  1. Reconstructing the primordial spectrum of fluctuations of the universe from the observed nonlinear clustering of galaxies

    NASA Technical Reports Server (NTRS)

    Hamilton, A. J. S.; Matthews, Alex; Kumar, P.; Lu, Edward

    1991-01-01

    It was discovered that the nonlinear evolution of the two point correlation function in N-body experiments of galaxy clustering with Omega = 1 appears to be described to good approximation by a simple general formula. The underlying form of the formula is physically motivated, but its detailed representation is obtained empirically by fitting to N-body experiments. In this paper, the formula is presented along with an inverse formula which converts a final, nonlinear correlation function into the initial linear correlation function. The inverse formula is applied to observational data from the CfA, IRAs, and APM galaxy surveys, and the initial spectrum of fluctuations of the universe, if Omega = 1.

  2. The Singular Spectrum Analysis method and its application to seismic data denoising and reconstruction

    NASA Astrophysics Data System (ADS)

    Oropeza, Vicente E.

    Attenuating random and coherent noise is an important part of seismic data processing. Successful removal results in an enhanced image of the subsurface geology, which facilitate economical decisions in hydrocarbon exploration. This motivates the search for new and more efficient techniques for noise removal. The main goal of this thesis is to present an overview of the Singular Spectrum Analysis (SSA) technique, studying its potential application to seismic data processing. An overview of the application of SSA for time series analysis is presented. Subsequently, its applications for random and coherenet noise attenuation, expansion to multiple dimensions, and for the recovery of unrecorded seismograms are described. To improve the performance of SSA, a faster implementation via a randomized singular value decomposition is proposed. Results obtained in this work show that SSA is a versatile method for both random and coherent noise attenuation, as well as for the recovery of missing traces.

  3. Optimal quasifree approximation: Reconstructing the spectrum from ground-state energies

    NASA Astrophysics Data System (ADS)

    Campos Venuti, Lorenzo

    2011-07-01

    The sequence of ground-state energy density at finite size, eL, provides much more information than usually believed. Having at our disposal eL for short lattice sizes, we show how to reconstruct an approximate quasiparticle dispersion for any interacting model. The accuracy of this method relies on the best possible quasifree approximation to the model, consistent with the observed values of the energy eL. We also provide a simple criterion to assess whether such a quasifree approximation is valid. As a side effect, our method is able to assess whether the nature of the quasiparticles is fermionic or bosonic together with the effective boundary conditions of the model. When applied to the spin-1/2 Heisenberg model, the method produces a band of Fermi quasiparticles very close to the exact one of des Cloizeaux and Pearson. The method is further tested on a spin-1/2 Heisenberg model with explicit dimerization and on a spin-1 chain with single-ion anisotropy. A connection with the Riemann hypothesis is also pointed out.

  4. Reconstruction of the energy spectrum of electrons accelerated in the April 15, 2002 solar flare based on IRIS X-ray spectrometer measurements

    NASA Astrophysics Data System (ADS)

    Motorina, G. G.; Kudryavtsev, I. V.; Lazutkov, V. P.; Savchenko, M. I.; Skorodumov, D. V.; Charikov, Yu. E.

    2016-04-01

    We reconstruct the energy distribution of electrons accelerated in the April 15, 2002 solar flare on the basis of the data from the IRIS X-ray spectrometer onboard the CORONAS-F satellite. We obtain the solution to the integral equations describing the transformation of the spectrum of X-ray photons during the recording and reconstruction of the spectrum of accelerated electrons in the bremsstrahlung source using the random search method and the Tikhonov regularization method. In this event, we detected a singularity in the electron spectrum associated with the existence of a local minimum in the energy range 40-60 keV, which cannot be detected by a direct method.

  5. 3D seismic data de-noising and reconstruction using Multichannel Time Slice Singular Spectrum Analysis

    NASA Astrophysics Data System (ADS)

    Rekapalli, Rajesh; Tiwari, R. K.; Sen, Mrinal K.; Vedanti, Nimisha

    2017-05-01

    Noises and data gaps complicate the seismic data processing and subsequently cause difficulties in the geological interpretation. We discuss a recent development and application of the Multi-channel Time Slice Singular Spectrum Analysis (MTSSSA) for 3D seismic data de-noising in time domain. In addition, L1 norm based simultaneous data gap filling of 3D seismic data using MTSSSA also discussed. We discriminated the noises from single individual time slices of 3D volumes by analyzing Eigen triplets of the trajectory matrix. We first tested the efficacy of the method on 3D synthetic seismic data contaminated with noise and then applied to the post stack seismic reflection data acquired from the Sleipner CO2 storage site (pre and post CO2 injection) from Norway. Our analysis suggests that the MTSSSA algorithm is efficient to enhance the S/N for better identification of amplitude anomalies along with simultaneous data gap filling. The bright spots identified in the de-noised data indicate upward migration of CO2 towards the top of the Utsira formation. The reflections identified applying MTSSSA to pre and post injection data correlate well with the geology of the Southern Viking Graben (SVG).

  6. End-to-End Service Oriented Architectures (SOA) Security Project

    DTIC Science & Technology

    2012-02-01

    architecture for SOA. • A novel service invocation control mechanism for SOA using dynamic taint analysis (TA). • A trust broker (TB) system that maintains...architectures (SOAs) because the SOAs stress on machine-to-machine interactions, while most of the IT security mechanisms are based on human-to- machine...listing services worldwide. It is a standard mechanism for registering or publishing and discovering Web services. The services published into the UDDI

  7. Ordered End-to-End Multicast for Distributed Multimedia Systems

    DTIC Science & Technology

    2006-01-01

    Ordering of messages compensates for the lack of a global system state and the effects of asynchrony, unpredictable network delay, and disparities in...separate logical propagation graph or global clock synchronization, and ordering is dis- tributed across nodes on the delivery paths between sources...set on route by PN, deciding on a globally valid num- ber, and multicasting the message to the receiver set with a final and binding sequence number

  8. End-to-end experiment management in HPC

    SciTech Connect

    Bent, John M; Kroiss, Ryan R; Torrez, Alfred; Wingate, Meghan

    2010-01-01

    Experiment management in any domain is challenging. There is a perpetual feedback loop cycling through planning, execution, measurement, and analysis. The lifetime of a particular experiment can be limited to a single cycle although many require myriad more cycles before definite results can be obtained. Within each cycle, a large number of subexperiments may be executed in order to measure the effects of one or more independent variables. Experiment management in high performance computing (HPC) follows this general pattern but also has three unique characteristics. One, computational science applications running on large supercomputers must deal with frequent platform failures which can interrupt, perturb, or terminate running experiments. Two, these applications typically integrate in parallel using MPI as their communication medium. Three, there is typically a scheduling system (e.g. Condor, Moab, SGE, etc.) acting as a gate-keeper for the HPC resources. In this paper, we introduce LANL Experiment Management (LEM), an experimental management framework simplifying all four phases of experiment management. LEM simplifies experiment planning by allowing the user to describe their experimental goals without having to fully construct the individual parameters for each task. To simplify execution, LEM dispatches the subexperiments itself thereby freeing the user from remembering the often arcane methods for interacting with the various scheduling systems. LEM provides transducers for experiments that automatically measure and record important information about each subexperiment; these transducers can easily be extended to collect additional measurements specific to each experiment. Finally, experiment analysis is simplified by providing a general database visualization framework that allows users to quickly and easily interact with their measured data.

  9. Kepler Mission: End-to-End System Demonstration

    NASA Technical Reports Server (NTRS)

    Borucki, William; Koch, D.; Dunham, E.; Jenkins, J.; Witteborn, F.; Updike, T.; DeVincenzi, Donald L. (Technical Monitor)

    2000-01-01

    A test facility has been constructed to demonstrate the capability of differential ensemble photometry to detect transits of Earth-size planets orbiting solar-like stars. The main objective is to determine the effects of various noise sources on the capability of a CCD photometer to maintain a system relative precision of 1 x $10^(-5)$ for mv = 12 stars in the presence of system-induced noise sources. The facility includes a simulated star field, fast optics to simulate the telescope, a thinned back-illuminated CCD similar to those to be used on the spacecraft and computers to perform the onboard control, data processing and extraction. The test structure is thermally and mechanically isolated so that each source of noise can be introduced in a controlled fashion and evaluated for its contribution to the total noise budget. The effects of pointing errors or a changing thermal environment are imposed by piezo-electric devices. Transits are injected by heating small wires crossing apertures in the star plate. Signals as small as those from terrestrial-size transits of solar-like stars are introduced to demonstrate that such planets can be detected under realistic noise conditions. Examples of imposing several noise sources and the resulting detectabilities are presented. These show that a differential ensemble photometric approach CCD photometer can readily detect signals associated with Earth-size transits.

  10. Analysis of End-to-End Performance of LAN Systems

    DTIC Science & Technology

    1990-03-01

    thesis research. We show the results with respect to LAN utilization, request delay, complete transfer, delivery time , and incomplete transfer. These...request delay, LAN utilization and delivery time will be measured for the purpose of the performance analysis of LANs. Since the analytical approach based...one or two servers (as Tables 7-12 and Figures 26-31) " AVG, STD DEV delivery time for transaction class 1 with one or two servers: from PC to Server

  11. End-to-End Performance Management for Large Distributed Storage

    SciTech Connect

    Almadena Chtchelkanova

    2012-03-18

    Storage systems for large distributed clusters of computer servers are themselves large and distributed. Their complexity and scale make it hard to ensure that applications using them get good, predictable performance. At the same time, shared access to the system from multiple applications, users, and internal system activities leads to a need for predictable performance. This research investigates mechanisms for improving storage system performance in large distributed storage systems through mechanisms that integrate the performance aspects of the path that I/O operations take through the system, from the application interface on the compute server, through the network, to the storate servers. The research focuses on five parts of the I/O path in a distributed storage system: I/O scheduling at the storage server, storage server cache management, client-to-server network flow control, client-to-server connection management, and client cache management.

  12. Going End to End to Deliver High-Speed Data

    NASA Technical Reports Server (NTRS)

    2005-01-01

    By the end of the 1990s, the optical fiber "backbone" of the telecommunication and data-communication networks had evolved from megabits-per-second transmission rates to gigabits-per-second transmission rates. Despite this boom in bandwidth, however, users at the end nodes were still not being reached on a consistent basis. (An end node is any device that does not behave like a router or a managed hub or switch. Examples of end node objects are computers, printers, serial interface processor phones, and unmanaged hubs and switches.) The primary reason that prevents bandwidth from reaching the end nodes is the complex local network topology that exists between the optical backbone and the end nodes. This complex network topology consists of several layers of routing and switch equipment which introduce potential congestion points and network latency. By breaking down the complex network topology, a true optical connection can be achieved. Access Optical Networks, Inc., is making this connection a reality with guidance from NASA s nondestructive evaluation experts.

  13. On Estimating End-to-End Network Path Properties

    NASA Technical Reports Server (NTRS)

    Allman, Mark; Paxson, Vern

    1999-01-01

    The more information about current network conditions available to a transport protocol, the more efficiently it can use the network to transfer its data. In networks such as the Internet, the transport protocol must often form its own estimates of network properties based on measurements per-formed by the connection endpoints. We consider two basic transport estimation problems: determining the setting of the retransmission timer (RTO) for are reliable protocol, and estimating the bandwidth available to a connection as it begins. We look at both of these problems in the context of TCP, using a large TCP measurement set [Pax97b] for trace-driven simulations. For RTO estimation, we evaluate a number of different algorithms, finding that the performance of the estimators is dominated by their minimum values, and to a lesser extent, the timer granularity, while being virtually unaffected by how often round-trip time measurements are made or the settings of the parameters in the exponentially-weighted moving average estimators commonly used. For bandwidth estimation, we explore techniques previously sketched in the literature [Hoe96, AD98] and find that in practice they perform less well than anticipated. We then develop a receiver-side algorithm that performs significantly better.

  14. SU-F-18C-02: Evaluations of the Noise Power Spectrum of a CT Iterative Reconstruction Technique for Radiation Therapy

    SciTech Connect

    Dolly, S; Chen, H; Anastasio, M; Mutic, S; Li, H

    2014-06-15

    Purpose: To quantitatively assess the noise power spectrum (NPS) of the new, commercially released CT iterative reconstruction technique, iDose{sup 4} from Philips, to compare it with filtered back-projection techniques (FBP), and to provide clinical practice suggestions for radiation therapy. Methods: A uniform phantom was CT imaged with 120kVp tube potential over a range of mAs (250-3333). The image sets were reconstructed using two reconstruction algorithms (FBP and iDose{sup 4} with noise reduction levels 1, 3, and 6) and three reconstruction filters (standard B, smooth A, and sharp C), after which NPS variations were analyzed and compared on region of interest (ROI) sizes (16×16 to 128×128 pixels), ROI radii (0–65 mm), reconstruction algorithms, reconstruction filters, and mAs. Results: The NPS magnitude and shape depended considerably on ROI size and location for both reconstruction algorithms. Regional noise variance became more stationary as ROI size decreased, minimizing NPS artifacts. The optimal 32×32-pixel ROI size balanced the trade-off between stationary noise and adequate sampling. NPS artifacts were greatest at the center of reconstruction space and decreased with increasing ROI distance from the center. The optimal ROI position was located near the phantom's radial midpoint (∼40mm). For sharper filters, the NPS magnitude and the maximum magnitude frequency increased. Higher dose scans yielded lower NPS magnitudes for both reconstruction algorithms and all filters. Compared to FBP, the iDose{sup 4} algorithm reduced the NPS magnitude while preferentially reducing noise at mid-range spatial frequencies, altering noise texture. This reduction was more significant with increasing iDose{sup 4} noise reduction level. Conclusion: Compared to pixel standard deviation, NPS has greater clinical potential for task-based image quality assessment, describing both the magnitude and spatial frequency characteristics of image noise. While iDose{sup 4

  15. Reconstruction of the absorption spectrum of an object spot from the colour values of the corresponding pixel(s) in its digital image: the challenge of algal colours.

    PubMed

    Coltelli, Primo; Barsanti, Laura; Evangelista, Valter; Frassanito, Anna Maria; Gualtieri, Paolo

    2016-12-01

    A novel procedure for deriving the absorption spectrum of an object spot from the colour values of the corresponding pixel(s) in its image is presented. Any digital image acquired by a microscope can be used; typical applications are the analysis of cellular/subcellular metabolic processes under physiological conditions and in response to environmental stressors (e.g. heavy metals), and the measurement of chromophore composition, distribution and concentration in cells. In this paper, we challenged the procedure with images of algae, acquired by means of a CCD camera mounted onto a microscope. The many colours algae display result from the combinations of chromophores whose spectroscopic information is limited to organic solvents extracts that suffers from displacements, amplifications, and contraction/dilatation respect to spectra recorded inside the cell. Hence, preliminary processing is necessary, which consists of in vivo measurement of the absorption spectra of photosynthetic compartments of algal cells and determination of spectra of the single chromophores inside the cell. The final step of the procedure consists in the reconstruction of the absorption spectrum of the cell spot from the colour values of the corresponding pixel(s) in its digital image by minimization of a system of transcendental equations based on the absorption spectra of the chromophores under physiological conditions.

  16. A broad-spectrum sunscreen prevents UVA radiation-induced gene expression in reconstructed skin in vitro and in human skin in vivo.

    PubMed

    Marionnet, Claire; Grether-Beck, Susanne; Seité, Sophie; Marini, Alessandra; Jaenicke, Thomas; Lejeune, François; Bastien, Philippe; Rougier, André; Bernerd, Françoise; Krutmann, Jean

    2011-06-01

    The efficacy of sunscreens to protect against ultraviolet (UV) A radiation is usually assessed by measuring erythema formation and pigmentation. The biological relevance of these endpoints for UVA-induced skin damage, however, is not known. We therefore carried out two complementary studies to determine UVA protection provided by a broad-spectrum sunscreen product at a molecular level by studying UVA radiation-induced gene expression. One study was performed on human reconstructed skin in vitro with a semi-global gene expression analysis of 227 genes in fibroblasts and 244 in keratinocytes. The second one was conducted in vivo in human volunteers and focused on genes involved in oxidative stress response and photo-ageing (haeme oxygenase-1, superoxide dismutase-2, glutathione peroxidase, catalase, matrix metalloproteinase-1). In-vitro UVA radiation induced modulation of genes involved in extracellular matrix homeostasis, oxidative stress, heat shock responses, cell growth, inflammation and epidermal differentiation. Sunscreen pre-application abrogated or significantly reduced these effects, as underlined by unsupervised clustering analysis. The in vivo study confirmed that the sunscreen prevented UVA radiation-induced transcriptional expression of the five studied genes. These findings indicate the high efficacy of a broad-spectrum sunscreen in protecting human skin against UVA-induced gene responses and suggest that this approach is a biologically relevant complement to existing methods.

  17. Reconstruction of the radionuclide spectrum of liquid radioactive waste released into the Techa river in 1949-1951.

    PubMed

    Mokrov, Yuri G

    2003-04-01

    The major part of the liquid radioactive waste released by the Mayak Production Association (PA) radiochemical plant into the Techa river occurred in 1949-1951, but there is information on only one single radiochemical analysis of a water sample taken on 24 and 25 September 1951. These data are here used to assess the spectrum of radionuclides that were released between 1949 and 1951. For this purpose, details of the radiochemical methods of radionuclide extraction and radiometric measurements of beta-activity used at Mayak PA in the 1950s have been taken into account. It is concluded that the data from the radiochemical measurements agree with the theoretical composition of fission products in uranium after exposure times in the reactor (120 days) and subsequent hold times (35 days) that were typical for the procedures at that time. The results of the analysis are at variance with assumptions that underlie the current Techa river dosimetry system. They confirm the conclusion that the external doses to the Techa river residents in the critical period up to 1952 were predominantly due to short-lived fission products.

  18. Successful liver allograft inflow reconstruction with the right gastroepiploic vein.

    PubMed

    Pinheiro, Rafael S; Cruz, Ruy J; Nacif, Lucas S; Vane, Matheus F; D'Albuquerque, Luiz A C

    2016-02-01

    Portal vein thrombosis is a common complication in cirrhotic patients. When portal vein thrombectomy is not a suitable option, a large collateral vessel can be used for allograft venous inflow reconstruction. We describe an unusual case of successful portal revascularization using the right gastroepiploic vein. The patient underwent a cadaveric orthotopic liver transplantation with end-to-end anastomosis of the portal vein to the right gastroepiploic vein. Six months after liver transplantation the patient is well with good liver function. The use of the right gastroepiploic vein for allograft venous reconstruction is feasible and safe, with a great advantage of avoiding the need of venous jump graft.

  19. Rib-sparing and internal mammary artery-preserving microsurgical breast reconstruction with the free DIEP flap.

    PubMed

    Kim, Hyungsuk; Lim, So-Young; Pyon, Jai-Kyong; Bang, Sa-Ik; Oh, Kap Sung; Lee, Jeong Eon; Nam, Seok Jin; Mun, Goo-Hyun

    2013-03-01

    Using an internal mammary artery as the recipient vessel in a free flap autologous breast reconstruction is common practice, but this vessel is often sacrificed for end-to-end anastomosis and is typically assessed by removing a costal cartilage segment. The authors studied the reliability of the end-to-side arterial anastomosis using a rib-sparing approach by comparing it with end-to-end anastomosis. The authors analyzed 100 consecutive medical records of patients who underwent autologous breast reconstruction with a free deep inferior epigastric artery perforator flap in which the internal mammary vessels were assessed using a rib-sparing technique. The study compared the complications between the two groups of end-to-side arterial anastomosis (50 cases) and end-to-end arterial anastomosis (50 cases). Exposure of the internal mammary artery using a rib-sparing technique was performed successfully in all 100 flaps. The second and third intercostal spaces were used in 46 and 54 cases, respectively. The mean width of the used intercostal space was 18.3 ± 2.4 mm in the end-to-side group and 18.3 ± 2.9 mm in the end-to-end group (p = 0.923). All flaps survived without partial or total necrosis. One case of venous insufficiency that required exploration occurred in the end-to-side group; the flap was totally saved with venous revision. There was no significant statistical difference between the end-to-side and end-to-end groups in all other variables, including mean flap ischemic time (p = 0.431) and fat necrosis (p = 0.339). The rib-sparing and internal mammary artery-preserving free deep inferior epigastric artery perforator flap transfer is an efficient and safe technique for microsurgical breast reconstruction.

  20. Use of circumferential stapler in reconstruction following resections for carcinoma of the cardia.

    PubMed

    Molina, J E; Lawton, B R; Avance, D

    1981-04-01

    The use of the End-to-End Anastomosis (EEA) circumferential stapler for reconstruction following resection of the esophagus and stomach for carcinoma of the cardia is reported here in 9 consecutive patients with fifteen anastomoses performed with this unit. The technical aspects of the EEA stapler are emphasized. Two frequent problems associated with this type of operation namely, stenosis or leak at the suture line, are completely avoided by the use of this stapler unit. Its use is recommended.

  1. Characterization and MCNP simulation of neutron energy spectrum shift after transmission through strong absorbing materials and its impact on tomography reconstructed image.

    PubMed

    Hachouf, N; Kharfi, F; Boucenna, A

    2012-10-01

    An ideal neutron radiograph, for quantification and 3D tomographic image reconstruction, should be a transmission image which exactly obeys to the exponential attenuation law of a monochromatic neutron beam. There are many reasons for which this assumption does not hold for high neutron absorbing materials. The main deviations from the ideal are due essentially to neutron beam hardening effect. The main challenges of this work are the characterization of neutron transmission through boron enriched steel materials and the observation of beam hardening. Then, in our work, the influence of beam hardening effect on neutron tomographic image, for samples based on these materials, is studied. MCNP and FBP simulation are performed to adjust linear attenuation coefficients data and to perform 2D tomographic image reconstruction with and without beam hardening corrections. A beam hardening correction procedure is developed and applied based on qualitative and quantitative analyses of the projections data. Results from original and corrected 2D reconstructed images obtained shows the efficiency of the proposed correction procedure. Copyright © 2012 Elsevier Ltd. All rights reserved.

  2. SIRENA software for Athena X-IFU event reconstruction

    NASA Astrophysics Data System (ADS)

    Ceballos, M. T.; Cobo, B.; Peille, P.; Wilms, J.; Brand, T.; Dauser, T.; Bandler, S.; Smith, S.

    2017-03-01

    The X-ray Observatory Athena was proposed in April 2014 as the mission to implement the science theme "The Hot and Energetic Universe" selected by ESA for L2 (the second Large-class mission in ESA’s Cosmic Vision science programme). One of the two X-ray detectors designed to be onboard Athena is X-IFU, a cryogenic microcalorimeter based on Transition Edge Sensor (TES) technology that will provide spatially resolved high-resolution spectroscopy. X-IFU will be developed by an international consortium led by IRAP (PI), SRON (co-PI) and IAPS/INAF (co-PI) and involving ESA Member States, Japan and the United States. In Spain, IFCA (CSIC-UC) has an anticipated contribution to X-IFU through the Digital Readout Electronics (DRE) unit, in particular in the Event Processor Subsystem. For this purpose and in collaboration with the Athena end-to-end simulations team, we are currently developing the SIRENA package as part of the publicly available SIXTE end-to-end simulator. SIRENA comprises a set of processing algorithms aimed at recognizing, from a noisy signal, the intensity pulses generated by the absorption of the X-ray photons, to lately reconstruct their energy, position and arrival time. This poster describes the structure of the package and the different algorithms currently implemented as well as their comparative performance in the energy resolution achieved in the reconstruction of the instrument events.

  3. PICASSO: an end-to-end image simulation tool for space and airborne imaging systems

    NASA Astrophysics Data System (ADS)

    Cota, Stephen A.; Bell, Jabin T.; Boucher, Richard H.; Dutton, Tracy E.; Florio, Christopher J.; Franz, Geoffrey A.; Grycewicz, Thomas J.; Kalman, Linda S.; Keller, Robert A.; Lomheim, Terrence S.; Paulson, Diane B.; Wilkinson, Timothy S.

    2010-06-01

    The design of any modern imaging system is the end result of many trade studies, each seeking to optimize image quality within real world constraints such as cost, schedule and overall risk. Image chain analysis - the prediction of image quality from fundamental design parameters - is an important part of this design process. At The Aerospace Corporation we have been using a variety of image chain analysis tools for many years, the Parameterized Image Chain Analysis & Simulation SOftware (PICASSO) among them. In this paper we describe our PICASSO tool, showing how, starting with a high quality input image and hypothetical design descriptions representative of the current state of the art in commercial imaging satellites, PICASSO can generate standard metrics of image quality in support of the decision processes of designers and program managers alike.

  4. End-to-end information system concept for the Mars Telecommunications Orbiter

    NASA Technical Reports Server (NTRS)

    Breidenthal, Julian C.; Edwards, Charles D.; Greenberg, Edward; Kazz, Greg J.; Noreen, Gary K.

    2006-01-01

    The Mars Telecommunications Orbiter (MTO) was intended to provide high-performance deep space relay links to landers, orbiters, sample-return missions, and approaching spacecraft in the vicinity of Mars, to demostrate interplanetary laser communications, to demonstrate autonomous navigation, and to carry out its own science investigations.

  5. End-to-end information system concept for the Mars Telecommunications Orbiter

    NASA Technical Reports Server (NTRS)

    Bridenthal, Julian C.; Edwards, Charles D.; Greenberg, Edward; Kazz, Greg J.; Noreen, Gary K.

    2006-01-01

    The Mars Telecommunications Orbiter (MTO) was intended to provide high-performance deep space relay links to landers, orbiters, sample-return, missions, and approaching spacecraft in the vicinity of Mars, to demonstrate interplanetary laser communications, to demonstrate autonomous navigation, and to carry out is own science investigations.

  6. Integrating end-to-end encryption and authentication technology into broadband networks

    SciTech Connect

    Pierson, L.G.

    1995-11-01

    BISDN services will involve the integration of high speed data, voice, and video functionality delivered via technology similar to Asynchronous Transfer Mode (ATM) switching and SONET optical transmission systems. Customers of BISDN services may need a variety of data authenticity and privacy assurances, via Asynchronous Transfer Mode (ATM) services Cryptographic methods can be used to assure authenticity and privacy, but are hard to scale for implementation at high speed. The incorporation of these methods into computer networks can severely impact functionality, reliability, and performance. While there are many design issues associated with the serving of public keys for authenticated signaling and for establishment of session cryptovariables, this paper is concerned with the impact of encryption itself on such communications once the signaling and setup have been completed. Network security protections should be carefully matched to the threats against which protection is desired. Even after eliminating unnecessary protections, the remaining customer-required network security protections can impose severe performance penalties. These penalties (further discussed below) usually involve increased communication processing for authentication or encryption, increased error rate, increased communication delay, and decreased reliability/availability. Protection measures involving encryption should be carefully engineered so as to impose the least performance, reliability, and functionality penalties, while achieving the required security protection. To study these trade-offs, a prototype encryptor/decryptor was developed. This effort demonstrated the viability of implementing certain encryption techniques in high speed networks. The research prototype processes ATM cells in a SONET OC-3 payload. This paper describes the functionality, reliability, security, and performance design trade-offs investigated with the prototype.

  7. End-to-End Modeling with the Heimdall Code to Scope High-Power Microwave Systems

    DTIC Science & Technology

    2007-06-01

    which is modeled as a Thevenin-equivalent voltage source, with open-circuit voltage VPP and output impedance ZPP . We model the RF Source electrically...chosen device radius and VPP and ZPP . As a final example, our treatment of the tunable relativistic magnetron uses a piecewise-linear model for...the left and the RF Source to the right, with VPP and ZPP the open-circuit voltage and output impedance of the Pulsed Power and VRF and IRF the

  8. An end-to-end assessment of extreme weather impacts on food security

    NASA Astrophysics Data System (ADS)

    Chavez, Erik; Conway, Gordon; Ghil, Michael; Sadler, Marc

    2015-11-01

    Both governments and the private sector urgently require better estimates of the likely incidence of extreme weather events, their impacts on food crop production and the potential consequent social and economic losses. Current assessments of climate change impacts on agriculture mostly focus on average crop yield vulnerability to climate and adaptation scenarios. Also, although new-generation climate models have improved and there has been an exponential increase in available data, the uncertainties in their projections over years and decades, and at regional and local scale, have not decreased. We need to understand and quantify the non-stationary, annual and decadal climate impacts using simple and communicable risk metrics that will help public and private stakeholders manage the hazards to food security. Here we present an `end-to-end’ methodological construct based on weather indices and machine learning that integrates current understanding of the various interacting systems of climate, crops and the economy to determine short- to long-term risk estimates of crop production loss, in different climate and adaptation scenarios. For provinces north and south of the Yangtze River in China, we have found that risk profiles for crop yields that translate climate into economic variability follow marked regional patterns, shaped by drivers of continental-scale climate. We conclude that to be cost-effective, region-specific policies have to be tailored to optimally combine different categories of risk management instruments.

  9. From End to End: tRNA Editing at 5'- and 3'-Terminal Positions

    PubMed Central

    Betat, Heike; Long, Yicheng; Jackman, Jane E.; Mörl, Mario

    2014-01-01

    During maturation, tRNA molecules undergo a series of individual processing steps, ranging from exo- and endonucleolytic trimming reactions at their 5'- and 3'-ends, specific base modifications and intron removal to the addition of the conserved 3'-terminal CCA sequence. Especially in mitochondria, this plethora of processing steps is completed by various editing events, where base identities at internal positions are changed and/or nucleotides at 5'- and 3'-ends are replaced or incorporated. In this review, we will focus predominantly on the latter reactions, where a growing number of cases indicate that these editing events represent a rather frequent and widespread phenomenon. While the mechanistic basis for 5'- and 3'-end editing differs dramatically, both reactions represent an absolute requirement for generating a functional tRNA. Current in vivo and in vitro model systems support a scenario in which these highly specific maturation reactions might have evolved out of ancient promiscuous RNA polymerization or quality control systems. PMID:25535083

  10. The Kepler End-to-End Data Pipeline: From Photons to Far Away Worlds

    NASA Technical Reports Server (NTRS)

    Cooke, Brian; Thompson, Richard; Standley, Shaun

    2012-01-01

    The Kepler mission is described in overview and the Kepler technique for discovering exoplanets is discussed. The design and implementation of the Kepler spacecraft, tracing the data path from photons entering the telescope aperture through raw observation data transmitted to the ground operations team is described. The technical challenges of operating a large aperture photometer with an unprecedented 95 million pixel detector are addressed as well as the onboard technique for processing and reducing the large volume of data produced by the Kepler photometer. The technique and challenge of day-to-day mission operations that result in a very high percentage of time on target is discussed. This includes the day to day process for monitoring and managing the health of the spacecraft, the annual process for maintaining sun on the solar arrays while still keeping the telescope pointed at the fixed science target, the process for safely but rapidly returning to science operations after a spacecraft initiated safing event and the long term anomaly resolution process.The ground data processing pipeline, from the point that science data is received on the ground to the presentation of preliminary planetary candidates and supporting data to the science team for further evaluation is discussed. Ground management, control, exchange and storage of Kepler's large and growing data set is discussed as well as the process and techniques for removing noise sources and applying calibrations to intermediate data products.

  11. End-to-end observatory software modeling using domain specific languages

    NASA Astrophysics Data System (ADS)

    Filgueira, José M.; Bec, Matthieu; Liu, Ning; Peng, Chien; Soto, José

    2014-07-01

    The Giant Magellan Telescope (GMT) is a 25-meter extremely large telescope that is being built by an international consortium of universities and research institutions. Its software and control system is being developed using a set of Domain Specific Languages (DSL) that supports a model driven development methodology integrated with an Agile management process. This approach promotes the use of standardized models that capture the component architecture of the system, that facilitate the construction of technical specifications in a uniform way, that facilitate communication between developers and domain experts and that provide a framework to ensure the successful integration of the software subsystems developed by the GMT partner institutions.

  12. Improving End-To-End Tsunami Warning for Risk Reduction on Canada’s West Coast

    DTIC Science & Technology

    2015-01-01

    s forest sector’s performance has declined significantly, as have traditional salmon and hering fisheries and seafood processing. Mining activity...transitioning. B.C. has always ofered some of the world’s finest saltwater sport fishing for al five species of Pacific salmon and for botom fish like...Forest Tenure Harvesting Authority • Salmon Hatcheries • Shelfish Aquaculture Plan Unit Boundaries • Saltwater Finfish • Shore unit Polygons

  13. An End-to-End Architecture for Science Goal Driven Observing

    NASA Technical Reports Server (NTRS)

    Jones, Jeremy; Grosvenor, Sandy; Koratkar, Anuradha; Memarsadeghi, Nargess; Wolf, Karl; Obenschain, Arthur F. (Technical Monitor)

    2002-01-01

    New observatories will have greater on-board storage capacity and on-board processing capabilities. The new bottleneck will be download capacity. The cost of downlink time and limitations of bandwidth will end the era where all exposure data is downloaded and all data processing is performed on the ground. In addition, observing campaigns involving inherently variable targets will need scheduling flexibility to focus observing time and data download on exposures that are scientifically interesting. The ability to quickly recognize and react to such events by re-prioritizing the observing schedule will be an essential characteristic for maximizing scientific returns. It will also be a step towards increasing spacecraft autonomy, a major goal of NASA's strategic plan. The science goal monitoring (SGM) system is a proof-of-concept effort to address these challenges. We are developing an interactive distributed system that will use on-board processing and storage combined with event-driven interfaces with ground-based processing and operations, to enable fast re-prioritization of observing schedules, and to minimize time spent on non-optimized observations. SGM is initially aimed towards time-tagged observing modes used frequently in spectroscopic studies of varying targets. In particular, the SGM is collaborating with the proposed MIDEX-class mission Kronos team. The variable targets that Kronos seeks to study make an adaptive system such as SGM particularly valuable for achieving mission goals. However, the architecture and interfaces will also be designed for easy adaptability to other observing platforms, including ground-based systems and to work with different scheduling and pipeline processing systems. This talk will focus on our strategy for developing SGM and the technical challenges that we have encountered. We will discuss the SGM architecture as it applies to the Kronos mission and explain how it is scalable to other missions.

  14. MONTAGE: A Methodology for Designing Composable End-to-End Secure Distributed Systems

    DTIC Science & Technology

    2012-08-01

    of the specification itself. Examples include the seL4 microkernel work by Klein et al. [KEH+09], which presents the experience of formally proving... electromagnetic , optical, acoustic or other nature [AARR02, Kuh02, ST04], or temperature drift [ZBA10]. We make the assumption that virtual machines have no

  15. End-to-end design consideration of a radar altimeter for terrain-aided navigation

    NASA Astrophysics Data System (ADS)

    Chun, Joohwan; Choi, Sanghyouk; Paek, Inchan; Park, Dongmin; Yoo, Kyungju

    2013-10-01

    We present a preliminary simulation study of an interferometric SAR altimeter for the terrain-aided navigation application. Our simulation includes raw SAR data generation, azimuth compression, leading edge detection of the echo signal, maximum likelihood angle estimation and the Bayesian state estimation. Sour results show that radar altimeter performance can be improved with the feedback loop from the rear-end navigation part.

  16. Post2 End-to-End Descent and Landing Simulation for ALHAT Design Analysis Cycle 2

    NASA Technical Reports Server (NTRS)

    Davis, Jody L.; Striepe, Scott A.; Maddock, Robert W.; Johnson, Andrew E.; Paschall, Stephen C., II

    2010-01-01

    The ALHAT project is an agency-level program involving NASA centers, academia, and industry, with a primary goal to develop a safe, autonomous, precision-landing system for robotic and crew-piloted lunar and planetary descent vehicles. POST2 is used as the 6DOF descent and landing trajectory simulation for determining integrated system performance of ALHAT landing-system models and lunar environment models. This paper presents updates in the development of the ALHAT POST2 simulation, as well as preliminary system performance analysis for ALDAC-2 used for the testing and assessment of ALHAT system models. The ALDAC-2 POST2 Monte Carlo simulation results have been generated and focus on HRN model performance with the fully integrated system, as well performance improvements of AGNC and TSAR model since the previous design analysis cycle

  17. Australasian brachytherapy audit: results of the 'end-to-end' dosimetry pilot study.

    PubMed

    Haworth, Annette; Wilfert, Lisa; Butler, Duncan; Ebert, Martin A; Todd, Stephen; Bucci, Joseph; Duchesne, Gillian M; Joseph, David; Kron, Tomas

    2013-08-01

    We present the results of a pilot study to test the feasibility of a brachytherapy dosimetry audit. The feasibility study was conducted at seven sites from four Australian states in both public and private centres. A purpose-built cylindrical water phantom was imaged using the local imaging protocol and a treatment plan was generated to deliver 1 Gy to the central (1 of 3) thermoluminescent dosimeter (TLD) from six dwell positions. All centres completed the audit, consisting of three consecutive irradiations, within a 2-h time period, with the exception of one centre that uses a pulsed dose rate brachytherapy unit. All TLD results were within 4.5% of the predicted value, with the exception of one subset where the dwell position step size was incorrectly applied. While the limited data collected in the study demonstrated considerable heterogeneity in clinical practice, the study proved a brachytherapy dosimetry audit to be feasible. Future studies should include verification of source strength using a Standard Dosimetry Laboratory calibrated chamber, a phantom that more closely mimics the clinical situation, a more comprehensive review of safety and quality assurance (QA) procedures including source dwell time and position accuracy, and a review of patient treatment QA procedures such as applicator position verification. © 2013 The Authors. Journal of Medical Imaging and Radiation Oncology © 2013 The Royal Australian and New Zealand College of Radiologists.

  18. End-to-end laser radar range code for coherent cw lasers

    NASA Astrophysics Data System (ADS)

    Yoder, M. John; Seliverstov, Dima

    1996-06-01

    A user friendly modular computer code is described for CW coherent laser radar which includes all relevant physical effects needed to evaluate the probability of detection versus time after launch for ballistic missiles or other targets of interest. The beginning point of the code is the conventional laser radar range equation. Atmospheric attenuation is determined from an integral FASCODE calculation, and the laser radar range equation is solved for a curved-earth geometry including free air turbulence induced beam spreading. Several different atmospheric turbulence models are selectable. Target cross-sections can be input into the code as a function of aspect angle Coherence time and transverse coherence length limits are included in the code. Beam jitter effects are also calculated. The carrier-to-noise ratio is calculated including all of these (complicated) variables and degradations. The code then calculates the probability of detection of the target as a function of time using incoherent integration of coherent sub-pulses. The governing equations and practical results are presented for detection and tracking of long range theater ballistic missiles from airborne surveillance platforms. The use of CW lasers requires increased measurement times compared to pulsed lasers and results in an averaging of the target fading statistics.

  19. Assessing the Performance Limits of Internal Coronagraphs Through End-to-End Modeling

    NASA Technical Reports Server (NTRS)

    Krist, John E.; Belikov, Ruslan; Pueyo, Laurent; Mawet, Dimitri P.; Moody, Dwight; Trauger, John T.; Shaklan, Stuart B.

    2013-01-01

    As part of the NASA ROSES Technology Demonstrations for Exoplanet Missions (TDEM) program, we conducted a numerical modeling study of three internal coronagraphs (PIAA, vector vortex, hybrid bandlimited) to understand their behaviors in realistically-aberrated systems with wavefront control (deformable mirrors). This investigation consisted of two milestones: (1) develop wavefront propagation codes appropriate for each coronagraph that are accurate to 1% or better (compared to a reference algorithm) but are also time and memory efficient, and (2) use these codes to determine the wavefront control limits of each architecture. We discuss here how the milestones were met and identify some of the behaviors particular to each coronagraph. The codes developed in this study are being made available for community use. We discuss here results for the HBLC and VVC systems, with PIAA having been discussed in a previous proceeding.

  20. Assessing the Performance Limits of Internal Coronagraphs Through End-to-End Modeling

    NASA Technical Reports Server (NTRS)

    Krist, John E.; Belikov, Ruslan; Pueyo, Laurent; Mawet, Dimitri P.; Moody, Dwight; Trauger, John T.; Shaklan, Stuart B.

    2013-01-01

    As part of the NASA ROSES Technology Demonstrations for Exoplanet Missions (TDEM) program, we conducted a numerical modeling study of three internal coronagraphs (PIAA, vector vortex, hybrid bandlimited) to understand their behaviors in realistically-aberrated systems with wavefront control (deformable mirrors). This investigation consisted of two milestones: (1) develop wavefront propagation codes appropriate for each coronagraph that are accurate to 1% or better (compared to a reference algorithm) but are also time and memory efficient, and (2) use these codes to determine the wavefront control limits of each architecture. We discuss here how the milestones were met and identify some of the behaviors particular to each coronagraph. The codes developed in this study are being made available for community use. We discuss here results for the HBLC and VVC systems, with PIAA having been discussed in a previous proceeding.

  1. HIDE & SEEK: End-to-end packages to simulate and process radio survey data

    NASA Astrophysics Data System (ADS)

    Akeret, J.; Seehars, S.; Chang, C.; Monstein, C.; Amara, A.; Refregier, A.

    2017-01-01

    As several large single-dish radio surveys begin operation within the coming decade, a wealth of radio data will become available and provide a new window to the Universe. In order to fully exploit the potential of these datasets, it is important to understand the systematic effects associated with the instrument and the analysis pipeline. A common approach to tackle this is to forward-model the entire system-from the hardware to the analysis of the data products. For this purpose, we introduce two newly developed, open-source Python packages: the HI Data Emulator (HIDE) and the Signal Extraction and Emission Kartographer (SEEK) for simulating and processing single-dish radio survey data. HIDE forward-models the process of collecting astronomical radio signals in a single-dish radio telescope instrument and outputs pixel-level time-ordered-data. SEEK processes the time-ordered-data, removes artifacts from Radio Frequency Interference (RFI), automatically applies flux calibration, and aims to recover the astronomical radio signal. The two packages can be used separately or together depending on the application. Their modular and flexible nature allows easy adaptation to other instruments and datasets. We describe the basic architecture of the two packages and examine in detail the noise and RFI modeling in HIDE, as well as the implementation of gain calibration and RFI mitigation in SEEK. We then apply HIDE &SEEK to forward-model a Galactic survey in the frequency range 990-1260 MHz based on data taken at the Bleien Observatory. For this survey, we expect to cover 70% of the full sky and achieve a median signal-to-noise ratio of approximately 5-6 in the cleanest channels including systematic uncertainties. However, we also point out the potential challenges of high RFI contamination and baseline removal when examining the early data from the Bleien Observatory. The fully documented HIDE &SEEK packages are available at http://hideseek.phys.ethz.ch/ and are published under the GPLv3 license on GitHub.

  2. Mars End-to-End Microfluidic Analyzer (MEEMA) for Solids, Liquids, and Gases

    NASA Astrophysics Data System (ADS)

    Willis, P. A.; Stockton, A. M.; Mora, M. F.; Cable, M. L.; Jensen, E. C.; Jiao, H.; Mathies, R. A.

    2012-06-01

    We propose to develop MEEMA, a 3kg, 2W, flight-capable microfluidic lab-on-a-chip analyzer that is capable of injesting solid, liquid, or gas samples and performing a suite of chemical analyses with parts per trillion sensitivity.

  3. Standardization of End-to-End Performance of Digital Video Teleconferencing/Video Telephony Systems

    DTIC Science & Technology

    1991-12-01

    Teleconferencing, NCS-TIB-90-6, Temporal Frequency as a Technique to Measure the Ability of a Teleconferencing System to Reproduce Motion, NCS-TIB-91...used for most tests. For completeness and ease of reference, the basic parameters of all patterns are repeated on Table 3-3, while a sample of one...video signal which influences the signal-to-noise ratio but does not have primary impact on the ability of the codec to faithfully reproduce a moving

  4. Hardware Support for Malware Defense and End-to-End Trust

    DTIC Science & Technology

    2017-02-01

    10 Figure 4 Design flow of ACM Bluespec FPGA model ................................................................ 11 Figure 5 ACM concept...may be insufficient for continuation of trust at an arbitrary point in the future. If the design of the system permits undetectable attacks against...formed IoT division, and with selected partners.  Standards: “Trust Dust”, the early prototype of the value of embedded TPM for cyber- physical systems

  5. Topological Constraints on Identifying Additive Link Metrics via End-to-end Paths Measurements

    DTIC Science & Technology

    2012-09-20

    U.K. Ministry of Defence or the U.K. Government. The U.S. and U.K. Governments are authorized to reproduce and distribute reprints for Government...MONITOR’S REPORT NUMBER(S) 12. DISTRIBUTION /AVAILABILITY STATEMENT Approved for public release; distribution unlimited 13. SUPPLEMENTARY NOTES...with (partially) unknown probabil- ity distributions , and apply various parametric/nonparametric techniques to estimate the link metric distributions

  6. PICASSO: an end-to-end image simulation tool for space and airborne imaging systems

    NASA Astrophysics Data System (ADS)

    Cota, Steve A.; Bell, Jabin T.; Boucher, Richard H.; Dutton, Tracy E.; Florio, Chris J.; Franz, Geoffrey A.; Grycewicz, Thomas J.; Kalman, Linda S.; Keller, Robert A.; Lomheim, Terrence S.; Paulson, Diane B.; Willkinson, Timothy S.

    2008-08-01

    The design of any modern imaging system is the end result of many trade studies, each seeking to optimize image quality within real world constraints such as cost, schedule and overall risk. Image chain analysis - the prediction of image quality from fundamental design parameters - is an important part of this design process. At The Aerospace Corporation we have been using a variety of image chain analysis tools for many years, the Parameterized Image Chain Analysis & Simulation SOftware (PICASSO) among them. In this paper we describe our PICASSO tool, showing how, starting with a high quality input image and hypothetical design descriptions representative of the current state of the art in commercial imaging satellites, PICASSO can generate standard metrics of image quality in support of the decision processes of designers and program managers alike.

  7. Privacy in Pharmacogenetics: An End-to-End Case Study of Personalized Warfarin Dosing

    PubMed Central

    Fredrikson, Matthew; Lantz, Eric; Jha, Somesh; Lin, Simon; Page, David; Ristenpart, Thomas

    2014-01-01

    We initiate the study of privacy in pharmacogenetics, wherein machine learning models are used to guide medical treatments based on a patient’s genotype and background. Performing an in-depth case study on privacy in personalized warfarin dosing, we show that suggested models carry privacy risks, in particular because attackers can perform what we call model inversion: an attacker, given the model and some demographic information about a patient, can predict the patient’s genetic markers. As differential privacy (DP) is an oft-proposed solution for medical settings such as this, we evaluate its effectiveness for building private versions of pharmacogenetic models. We show that DP mechanisms prevent our model inversion attacks when the privacy budget is carefully selected. We go on to analyze the impact on utility by performing simulated clinical trials with DP dosing models. We find that for privacy budgets effective at preventing attacks, patients would be exposed to increased risk of stroke, bleeding events, and mortality. We conclude that current DP mechanisms do not simultaneously improve genomic privacy while retaining desirable clinical efficacy, highlighting the need for new mechanisms that should be evaluated in situ using the general methodology introduced by our work. PMID:27077138

  8. End-to-end simulation of the image stability for the airborne telescope SOFIA

    NASA Astrophysics Data System (ADS)

    Schoenhoff, Ulrich; Eisentraeger, Peter; Wandner, Karl; Kaercher, Hans J.; Nordmann, Rainer

    2000-06-01

    To provide astronomers access to infrared wavelength unavailable from the ground the airborne telescope SOFIA is in development. This paper focuses on the image stability of the telescope, its modeling and simulation. The operation of the telescope under the harsh environmental conditions in the aircraft makes the prediction of the image stability during the design process necessary. For this purpose an integrated mathematical simulation model, which includes the optics, the structural dynamics and the control loops has been constructed. Because of the high relevance of the structural dynamics for image stability and control design, special attention is paid to the import and reduction of the finite element model of the telescopes mechanical structure. Different control approaches are considered for the attitude control and the compensation of the impact of the structural flexibility on the image motion. Additionally the secondary mirror servo-mechanism is utilized to optimize the image stability. Simulation results are shown.

  9. Design and Evaluation for the End-to-End Detection of TCP/IP Header Manipulation

    DTIC Science & Technology

    2014-06-01

    systems making IPv4 and IPv6 address announcements (over 56 thousand as of May 2014 [90]) and the number of domains observed in DNS (over 168 million...if they change an immutable field. Another point to note is that IPv6 , the anticipated eventual replacement for IPv4, does not even include a...protocols such as UDP and IPv6 may help improve the inferences HICCUPS provides to TCP or help a system’s networking stack improve performance for

  10. EQUIP: end-to-end quantification of uncertainty for impacts prediction

    NASA Astrophysics Data System (ADS)

    Morse, A. P.; Challinor, A. J.; Equip Consortium

    2010-12-01

    Inherent uncertainties in climate prediction present a serious challenge to attempts to assess future impacts and adaptation options. Such assessments are critical to any policy decisions regarding investment in resources to ensure human and environmental wellbeing in the face of environmental change and a growing population. Current methods for quantifying uncertainty in projections of climate and its impacts tend to focus first on taking full account of uncertainty, with a subsequent step assessing utility. We argue that a new approach is required, whereby climate and impacts models are used to develop risk-based prediction systems that focus on the information content of models and utility for decision-making. Preliminary steps in this direction are explored, principally using the example of climate-induced changes in crop yield. The relative contribution of uncertainty in crop and climate simulation to the total uncertainty in projected yield changes is examined. A focus on governing bio-physical processes across a number of crop models is used to characterise the robustness of the results. Further development of this approach relies on the development of decision-focussed techniques that analyse sources of uncertainty and assess and improve the information content of models of climate and its impacts. Such an approach is significantly different from tagging impacts models onto climate models. It implies substantial interaction with other organisations and stakeholders from development NGOs to the insurance sector and policy makers. These interactions should be aimed at ensuring that the principal lead-times, and formats, for the impact projections are those relevant to decision-making. The EQUIP project, and its associated open network of scientists, aims to develop the approach outlined above. The project is examining the cascade of uncertainty from climate to impacts by conducting integrated analyses of a range of sectors, principally crops, marine ecosystems, water management, heat waves and droughts. The research includes assessment of the information content of climate model projections, combination of climate models and data-driven models to support decisions, and evaluation of the quality of climate and impacts predictions.

  11. Exploring Two Approaches for an End-to-End Scientific Analysis Workflow

    NASA Astrophysics Data System (ADS)

    Dodelson, Scott; Kent, Steve; Kowalkowski, Jim; Paterno, Marc; Sehrish, Saba

    2015-12-01

    The scientific discovery process can be advanced by the integration of independently-developed programs run on disparate computing facilities into coherent workflows usable by scientists who are not experts in computing. For such advancement, we need a system which scientists can use to formulate analysis workflows, to integrate new components to these workflows, and to execute different components on resources that are best suited to run those components. In addition, we need to monitor the status of the workflow as components get scheduled and executed, and to access the intermediate and final output for visual exploration and analysis. Finally, it is important for scientists to be able to share their workflows with collaborators. We have explored two approaches for such an analysis framework for the Large Synoptic Survey Telescope (LSST) Dark Energy Science Collaboration (DESC); the first one is based on the use and extension of Galaxy, a web-based portal for biomedical research, and the second one is based on a programming language, Python. In this paper, we present a brief description of the two approaches, describe the kinds of extensions to the Galaxy system we have found necessary in order to support the wide variety of scientific analysis in the cosmology community, and discuss how similar efforts might be of benefit to the HEP community.

  12. Exploring Two Approaches for an End-to-End Scientific Analysis Workflow

    SciTech Connect

    Dodelson, Scott; Kent, Steve; Kowalkowski, Jim; Paterno, Marc; Sehrish, Saba

    2015-12-23

    The advance of the scientific discovery process is accomplished by the integration of independently-developed programs run on disparate computing facilities into coherent workflows usable by scientists who are not experts in computing. For such advancement, we need a system which scientists can use to formulate analysis workflows, to integrate new components to these workflows, and to execute different components on resources that are best suited to run those components. In addition, we need to monitor the status of the workflow as components get scheduled and executed, and to access the intermediate and final output for visual exploration and analysis. Finally, it is important for scientists to be able to share their workflows with collaborators. Moreover we have explored two approaches for such an analysis framework for the Large Synoptic Survey Telescope (LSST) Dark Energy Science Collaboration (DESC), the first one is based on the use and extension of Galaxy, a web-based portal for biomedical research, and the second one is based on a programming language, Python. In our paper, we present a brief description of the two approaches, describe the kinds of extensions to the Galaxy system we have found necessary in order to support the wide variety of scientific analysis in the cosmology community, and discuss how similar efforts might be of benefit to the HEP community.

  13. CUSat: An End-to-End In-Orbit Inspection System University Nanosatellite Program

    DTIC Science & Technology

    2007-01-01

    a Figure 5.5 2~h7 0 CAMtei Stea ,Roso,m TIC nee w warraoy- w It CT ina 2 *_o 15D" "w PROP u Da DSct CM- A-eA Fligh m-ep - *900 s ~. 220010* 108 usaw0...0280 (II...)jes 7 oni ត Onv_! 5c. PROGRAM ELEMENT NUMBER 6. AUTHOR( S ) 5d. PROJECT NUMBER Mason A. Peck Se. TASK NUMBER 5f. WORK UNIT NUMBER 7...PERFORMING ORGANIZATION NAME( S ) AND ADDRESS(ES) 8. PERFORMING ORGANIZATION REPORT NUMBER Cornell University 9. SPONSORING I MONITORING AGENCY NAME( S ) AND

  14. Emergence of Laplace therapeutics: declaring an end to end-stage heart failure.

    PubMed

    Mehra, Mandeep R; Uber, Patricia A

    2002-01-01

    A large number of chronic heart failure patients escape from the benefits of neurohormonal blockade only to transit into a discouragingly miserable state of what the physician often refers to as end-stage heart failure. Conceptually, the designation of end-stage as a description of a clinical scenario implies pessimism concerning recourse to a therapeutic avenue. A variety of surgical therapeutic techniques that take advantage of the law of Laplace, designed to effectively restore the cardiac shape from a spherical, mechanically inefficient pump to a more elliptical, structurally sound organ are now being employed. Additionally, the field of mechanical device implantation is surging ahead at a rapid pace. The weight of evidence regarding mechanical unloading using assist devices suggests that hemodynamic restoration is accompanied by regression of cellular hypertrophy, normalization of the neuroendocrine axis, improved expression of contractile proteins, enhanced cellular respiratory control, and decreases in markers of apoptosis and cellular stress. Thus, these lines of data point toward discarding the notion of end-stage heart failure. We are at a new crossroad in our quest to tackle chronic heart failure. It is our contention that the use of antiremodeling strategies, including device approaches, will soon signal the end of end-stage heart failure.

  15. End-to-End Verification of Information-Flow Security for C and Assembly Programs

    DTIC Science & Technology

    2016-04-01

    sentation purposes, we omit details regarding the well-known “infinite stuttering ” problem for simulations (described, for example, in [14]). Our Coq...definition of simulation includes a well-founded order that prevents infinite stuttering . Also notice that, contrary to our discussion earlier, we do

  16. Non-adaptive End-to-End Diagnosis for Complex Networks

    DTIC Science & Technology

    2015-09-30

    CISS, 2014. [5] M. Wang, W. Xu, E. Mallada and A. Tang, “Sparse Recovery with Graph Constraints”, IEEE Transactions on Information Theory ...of number of measurements for any given graph . In particular, for several special graphs , we were able to find the exact optimal number of...for goal number 1, we have shown the lower bound of number of measurements for any given graph . In particular, for several special graphs , we were

  17. Exploring Two Approaches for an End-to-End Scientific Analysis Workflow

    DOE PAGES

    Dodelson, Scott; Kent, Steve; Kowalkowski, Jim; ...

    2015-12-23

    The advance of the scientific discovery process is accomplished by the integration of independently-developed programs run on disparate computing facilities into coherent workflows usable by scientists who are not experts in computing. For such advancement, we need a system which scientists can use to formulate analysis workflows, to integrate new components to these workflows, and to execute different components on resources that are best suited to run those components. In addition, we need to monitor the status of the workflow as components get scheduled and executed, and to access the intermediate and final output for visual exploration and analysis. Finally,more » it is important for scientists to be able to share their workflows with collaborators. Moreover we have explored two approaches for such an analysis framework for the Large Synoptic Survey Telescope (LSST) Dark Energy Science Collaboration (DESC), the first one is based on the use and extension of Galaxy, a web-based portal for biomedical research, and the second one is based on a programming language, Python. In our paper, we present a brief description of the two approaches, describe the kinds of extensions to the Galaxy system we have found necessary in order to support the wide variety of scientific analysis in the cosmology community, and discuss how similar efforts might be of benefit to the HEP community.« less

  18. Experiments with Memory-to-Memory Coupling for End-to-End fusion Simulation Workflows

    SciTech Connect

    Docan, Ciprian; Zhang, Fan; Parashar, Manish; Cummings, Julian; Podhorszki, Norbert; Klasky, Scott A

    2010-01-01

    Scientific applications are striving to accurately simulate multiple interacting physical processes that comprise complex phenomena being modeled. Efficient and scalable parallel implementations of these coupled simulations present challenging interaction and coordination requirements, especially when the coupled physical processes are computationally heterogeneous and progress at different speeds. In this paper, we present the design, implementation and evaluation of a memory-to-memory coupling framework for coupled scientific simulations on high-performance parallel computing platforms. The framework is driven by the coupling requirements of the Center for Plasma Edge Simulation, and it provides simple coupling abstractions as well as efficient asynchronous (RDMA-based) memory-to-memory data transport mechanisms that complement existing parallel programming systems and data sharing frameworks. The framework enables flexible coupling behaviors that are asynchronous in time and space, and it supports dynamic coupling between heterogeneous simulation processes without enforcing any synchronization constraints. We evaluate the performance and scalability of the coupling framework using a specific coupling scenario, on the Jaguar Cray XT5 system at Oak Ridge National Laboratory.

  19. Increasing Army Supply Chain Performance: Using an Integrated End to End Metrics System

    DTIC Science & Technology

    2017-01-01

    performance specifications and feedback loops for ongoing and dynamic performance measurement (Bititci, Carrie, & McDevitt, 1997; Melnyk, Stewart ... Stewart , D. M., Zsidisin, G. A., Hanson, J., & Burns, L. (2005). An empirical investigation of the metrics alignment process. International Journal...of Productivity and Performance Management, 54(5/6), 312–324. Melnyk, S. A., Stewart , D. M., & Swink, M. (2004). Metrics and performance measurement

  20. Stock assessment and end-to-end ecosystem models alter dynamics of fisheries data.

    PubMed

    Storch, Laura S; Glaser, Sarah M; Ye, Hao; Rosenberg, Andrew A

    2017-01-01

    Although all models are simplified approximations of reality, they remain useful tools for understanding, predicting, and managing populations and ecosystems. However, a model's utility is contingent on its suitability for a given task. Here, we examine two model types: single-species fishery stock assessment and multispecies marine ecosystem models. Both are efforts to predict trajectories of populations and ecosystems to inform fisheries management and conceptual understanding. However, many of these ecosystems exhibit nonlinear dynamics, which may not be represented in the models. As a result, model outputs may underestimate variability and overestimate stability. Using nonlinear forecasting methods, we compare predictability and nonlinearity of model outputs against model inputs using data and models for the California Current System. Compared with model inputs, time series of model-processed outputs show more predictability but a higher prevalence of linearity, suggesting that the models misrepresent the actual predictability of the modeled systems. Thus, caution is warranted: using such models for management or scenario exploration may produce unforeseen consequences, especially in the context of unknown future impacts.

  1. Modeling and Simulation of Satellite Subsystems for End-to-End Spacecraft Modeling

    DTIC Science & Technology

    2006-04-01

    reaction wheel power requirements for a particular maneuver. The ADCS only calculates information at a specified time and passes it to SST; no future or...are calculated and fed into a reaction wheel model which will return the power requirements for the maneuver. In the case of calculating slew time

  2. An end-to-end workflow for engineering of biological networks from high-level specifications.

    PubMed

    Beal, Jacob; Weiss, Ron; Densmore, Douglas; Adler, Aaron; Appleton, Evan; Babb, Jonathan; Bhatia, Swapnil; Davidsohn, Noah; Haddock, Traci; Loyall, Joseph; Schantz, Richard; Vasilev, Viktor; Yaman, Fusun

    2012-08-17

    We present a workflow for the design and production of biological networks from high-level program specifications. The workflow is based on a sequence of intermediate models that incrementally translate high-level specifications into DNA samples that implement them. We identify algorithms for translating between adjacent models and implement them as a set of software tools, organized into a four-stage toolchain: Specification, Compilation, Part Assignment, and Assembly. The specification stage begins with a Boolean logic computation specified in the Proto programming language. The compilation stage uses a library of network motifs and cellular platforms, also specified in Proto, to transform the program into an optimized Abstract Genetic Regulatory Network (AGRN) that implements the programmed behavior. The part assignment stage assigns DNA parts to the AGRN, drawing the parts from a database for the target cellular platform, to create a DNA sequence implementing the AGRN. Finally, the assembly stage computes an optimized assembly plan to create the DNA sequence from available part samples, yielding a protocol for producing a sample of engineered plasmids with robotics assistance. Our workflow is the first to automate the production of biological networks from a high-level program specification. Furthermore, the workflow's modular design allows the same program to be realized on different cellular platforms simply by swapping workflow configurations. We validated our workflow by specifying a small-molecule sensor-reporter program and verifying the resulting plasmids in both HEK 293 mammalian cells and in E. coli bacterial cells.

  3. Analysis of End-to-End Encryption and Traffic Flow Confidentiality Options

    DTIC Science & Technology

    1994-04-20

    Fiber Distributed Data Interface (FDDI) ............................. 3-27 3.2.4 Description of 802.3 Carrier Sense Multiple Access with Collision ...Data Interface (FDDI) * IEEE 802.3 Carrier Sense Multiple Access with Collision Detection (CSMAICD). Common protocols that are excluded from this study...NSA SDNS Security Protocol 3 (SP3) [NIST 90] • ISO 8208 - X.25 Packet Layer Protocol [ISO 90C] • CCITT Link Access Procedures - B (LAPB). [CCITT 88

  4. Potential end-to-end imaging information rate advantages of various alternative communication systems

    NASA Technical Reports Server (NTRS)

    Rice, R. F.

    1978-01-01

    Various communication systems were considered which are required to transmit both imaging and a typically error sensitive, class of data called general science/engineering (gse) over a Gaussian channel. The approach jointly treats the imaging and gse transmission problems, allowing comparisons of systems which include various channel coding and data compression alternatives. Actual system comparisons include an Advanced Imaging Communication System (AICS) which exhibits the rather significant potential advantages of sophisticated data compression coupled with powerful yet practical channel coding.

  5. End-to-end information system concept for the Mars Telecommunications Orbiter

    NASA Technical Reports Server (NTRS)

    Bridenthal, Julian C.; Edwards, Charles D.; Greenberg, Edward; Kazz, Greg J.; Noreen, Gary K.

    2006-01-01

    The Mars Telecommunications Orbiter (MTO) was intended to provide high-performance deep space relay links to landers, orbiters, sample-return, missions, and approaching spacecraft in the vicinity of Mars, to demonstrate interplanetary laser communications, to demonstrate autonomous navigation, and to carry out is own science investigations.

  6. End-to-end information system concept for the Mars Telecommunications Orbiter

    NASA Technical Reports Server (NTRS)

    Breidenthal, Julian C.; Edwards, Charles D.; Greenberg, Edward; Kazz, Greg J.; Noreen, Gary K.

    2006-01-01

    The Mars Telecommunications Orbiter (MTO) was intended to provide high-performance deep space relay links to landers, orbiters, sample-return missions, and approaching spacecraft in the vicinity of Mars, to demostrate interplanetary laser communications, to demonstrate autonomous navigation, and to carry out its own science investigations.

  7. Integrated Information and Network Management for End-to-End Quality of Service

    DTIC Science & Technology

    2011-11-01

    the actual capacity of the network is unknown. D. Explicit Channel Reservation Explicit Channel Reservation ( ECR ) provides guaranteed bandwidth...for a stream of important packets. ECR works by establishing reservations for a stream of traffic. Although DiffServ is more prevalent, protocols...layer libraries for interacting with the lower-layer features of JCAN. JCAN provides implementations for Mobile IP, ECR WFQ, and CMR. The key

  8. The Kepler End-to-End Data Pipeline: From Photons to Far Away Worlds

    NASA Technical Reports Server (NTRS)

    Cooke, Brian; Thompson, Richard; Standley, Shaun

    2012-01-01

    The Kepler mission is described in overview and the Kepler technique for discovering exoplanets is discussed. The design and implementation of the Kepler spacecraft, tracing the data path from photons entering the telescope aperture through raw observation data transmitted to the ground operations team is described. The technical challenges of operating a large aperture photometer with an unprecedented 95 million pixel detector are addressed as well as the onboard technique for processing and reducing the large volume of data produced by the Kepler photometer. The technique and challenge of day-to-day mission operations that result in a very high percentage of time on target is discussed. This includes the day to day process for monitoring and managing the health of the spacecraft, the annual process for maintaining sun on the solar arrays while still keeping the telescope pointed at the fixed science target, the process for safely but rapidly returning to science operations after a spacecraft initiated safing event and the long term anomaly resolution process.The ground data processing pipeline, from the point that science data is received on the ground to the presentation of preliminary planetary candidates and supporting data to the science team for further evaluation is discussed. Ground management, control, exchange and storage of Kepler's large and growing data set is discussed as well as the process and techniques for removing noise sources and applying calibrations to intermediate data products.

  9. Data compression: The end-to-end information systems perspective for NASA space science missions

    NASA Technical Reports Server (NTRS)

    Tai, Wallace

    1991-01-01

    The unique characteristics of compressed data have important implications to the design of space science data systems, science applications, and data compression techniques. The sequential nature or data dependence between each of the sample values within a block of compressed data introduces an error multiplication or propagation factor which compounds the effects of communication errors. The data communication characteristics of the onboard data acquisition, storage, and telecommunication channels may influence the size of the compressed blocks and the frequency of included re-initialization points. The organization of the compressed data are continually changing depending on the entropy of the input data. This also results in a variable output rate from the instrument which may require buffering to interface with the spacecraft data system. On the ground, there exist key tradeoff issues associated with the distribution and management of the science data products when data compression techniques are applied in order to alleviate the constraints imposed by ground communication bandwidth and data storage capacity.

  10. End-to-End Concurrent Multipath Transfer Using Transport Layer Multihoming

    DTIC Science & Technology

    2006-07-01

    5.3). 5.1 Implementation Details BSD-SCTP (with CMT) is freely available as part of the KAME project [2]. While BSD- SCTP works with all BSD systems...experimentation with, CMT. 106 BIBLIOGRAPHY [1] Future combat systems website. http://www.globalsecurity.org/military/systems/ground/fcs.htm. [2] KAME Project

  11. Stock assessment and end-to-end ecosystem models alter dynamics of fisheries data

    PubMed Central

    Storch, Laura S.; Glaser, Sarah M.; Ye, Hao; Rosenberg, Andrew A.

    2017-01-01

    Although all models are simplified approximations of reality, they remain useful tools for understanding, predicting, and managing populations and ecosystems. However, a model’s utility is contingent on its suitability for a given task. Here, we examine two model types: single-species fishery stock assessment and multispecies marine ecosystem models. Both are efforts to predict trajectories of populations and ecosystems to inform fisheries management and conceptual understanding. However, many of these ecosystems exhibit nonlinear dynamics, which may not be represented in the models. As a result, model outputs may underestimate variability and overestimate stability. Using nonlinear forecasting methods, we compare predictability and nonlinearity of model outputs against model inputs using data and models for the California Current System. Compared with model inputs, time series of model-processed outputs show more predictability but a higher prevalence of linearity, suggesting that the models misrepresent the actual predictability of the modeled systems. Thus, caution is warranted: using such models for management or scenario exploration may produce unforeseen consequences, especially in the context of unknown future impacts. PMID:28199344

  12. Assessing Natural Product-Drug Interactions: An End-to-End Safety Framework.

    PubMed

    Roe, Amy L; Paine, Mary F; Gurley, Bill J; Brouwer, Kenneth R; Jordan, Scott; Griffiths, James C

    2016-04-01

    The use of natural products (NPs), including herbal medicines and other dietary supplements, by North Americans continues to increase across all age groups. This population has access to conventional medications, with significant polypharmacy observed in older adults. Thus, the safety of the interactions between multi-ingredient NPs and drugs is a topic of paramount importance. Considerations such as history of safe use, literature data from animal toxicity and human clinical studies, and NP constituent characterization would provide guidance on whether to assess NP-drug interactions experimentally. The literature is replete with reports of various NP extracts and constituents as potent inhibitors of drug metabolizing enzymes, and transporters. However, without standard methods for NP characterization or in vitro testing, extrapolating these reports to clinically-relevant NP-drug interactions is difficult. This lack of a clear definition of risk precludes clinicians and consumers from making informed decisions about the safety of taking NPs with conventional medications. A framework is needed that describes an integrated robust approach for assessing NP-drug interactions; and, translation of the data into formulation alterations, dose adjustment, labelling, and/or post-marketing surveillance strategies. A session was held at the 41st Annual Summer Meeting of the Toxicology Forum in Colorado Springs, CO, to highlight the challenges and critical components that should be included in a framework approach. Copyright © 2016 Elsevier Inc. All rights reserved.

  13. End-to-end Encryption for SMS Messages in the Health Care Domain.

    PubMed

    Hassinen, Marko; Laitinen, Pertti

    2005-01-01

    The health care domain has a high level of expectation on security and privacy of patient information. The security, privacy, and confidentiality issues are consistent all over the domain. Technical development and increasing use of mobile phones has led us to a situation in which SMS messages are used in the electronic interactions between health care professionals and patients. We will show that it is possible to send, receive and store text messages securely with a mobile phone with no additional hardware required. More importantly we will show that it is possible to obtain a reliable user authentication in systems using text message communication. Programming language Java is used for realization of our goals. This paper describes the general application structure, while details for the technical implementation and encryption methods are described in the referenced articles. We also propose some crucial areas where the implementation of encrypted SMS can solve previous lack of security.

  14. End-to-End Network QoS via Scheduling of Flexible Resource Reservation Requests

    SciTech Connect

    Sharma, S.; Katramatos, D.; Yu, D.

    2011-11-14

    Modern data-intensive applications move vast amounts of data between multiple locations around the world. To enable predictable and reliable data transfer, next generation networks allow such applications to reserve network resources for exclusive use. In this paper, we solve an important problem (called SMR3) to accommodate multiple and concurrent network reservation requests between a pair of end-sites. Given the varying availability of bandwidth within the network, our goal is to accommodate as many reservation requests as possible while minimizing the total time needed to complete the data transfers. We first prove that SMR3 is an NP-hard problem. Then we solve it by developing a polynomial-time heuristic, called RRA. The RRA algorithm hinges on an efficient mechanism to accommodate large number of requests by minimizing the bandwidth wastage. Finally, via numerical results, we show that RRA constructs schedules that accommodate significantly larger number of requests compared to other, seemingly efficient, heuristics.

  15. The Use of End-to-End Multicast Measurements for Characterizing Internal Network Behavior

    DTIC Science & Technology

    2002-08-01

    rates on link to GA inferred mtrace 11:40pm 11:50pm 12:00am 12:10am 12: 20am 12:30am 12:40am Time at AT&T Figure 3: Inferred vs. actual loss rates...denote the receivers in subtree τi,T . We denote the path from node i to j, i, j ∈ V (T ) in tree T by pT (i, j). Define a segment in T to be a path...n)∈ pT (ρ(T ),i) Dm,n where pT (ρ(T ), i) denote the path on tree T from source to node i. In an experiment, a set of probes is sent from the multicast

  16. End-to-end imaging information rate advantages of various alternative communication systems

    NASA Technical Reports Server (NTRS)

    Rice, R. F.

    1982-01-01

    The efficiency of various deep space communication systems which are required to transmit both imaging and a typically error sensitive class of data called general science and engineering (gse) are compared. The approach jointly treats the imaging and gse transmission problems, allowing comparisons of systems which include various channel coding and data compression alternatives. Actual system comparisons include an advanced imaging communication system (AICS) which exhibits the rather significant advantages of sophisticated data compression coupled with powerful yet practical channel coding. For example, under certain conditions the improved AICS efficiency could provide as much as two orders of magnitude increase in imaging information rate compared to a single channel uncoded, uncompressed system while maintaining the same gse data rate in both systems. Additional details describing AICS compression and coding concepts as well as efforts to apply them are provided in support of the system analysis.

  17. Science and Applications Space Platform (SASP) End-to-End Data System Study

    NASA Technical Reports Server (NTRS)

    Crawford, P. R.; Kasulka, L. H.

    1981-01-01

    The capability of present technology and the Tracking and Data Relay Satellite System (TDRSS) to accommodate Science and Applications Space Platforms (SASP) payload user's requirements, maximum service to the user through optimization of the SASP Onboard Command and Data Management System, and the ability and availability of new technology to accommodate the evolution of SASP payloads were assessed. Key technology items identified to accommodate payloads on a SASP were onboard storage devices, multiplexers, and onboard data processors. The primary driver is the limited access to TDRSS for single access channels due to sharing with all the low Earth orbit spacecraft plus shuttle. Advantages of onboard data processing include long term storage of processed data until TRDSS is accessible, thus reducing the loss of data, eliminating large data processing tasks at the ground stations, and providing a more timely access to the data.

  18. Eulerian BAO reconstructions and N -point statistics

    NASA Astrophysics Data System (ADS)

    Schmittfull, Marcel; Feng, Yu; Beutler, Florian; Sherwin, Blake; Chu, Man Yat

    2015-12-01

    As galaxy surveys begin to measure the imprint of baryonic acoustic oscillations (BAO) on large-scale structure at the subpercent level, reconstruction techniques that reduce the contamination from nonlinear clustering become increasingly important. Inverting the nonlinear continuity equation, we propose an Eulerian growth-shift reconstruction algorithm that does not require the displacement of any objects, which is needed for the standard Lagrangian BAO reconstruction algorithm. In real-space dark matter-only simulations the algorithm yields 95% of the BAO signal-to-noise obtained from standard reconstruction. The reconstructed power spectrum is obtained by adding specific simple 3- and 4-point statistics to the prereconstruction power spectrum, making it very transparent how additional BAO information from higher-point statistics is included in the power spectrum through the reconstruction process. Analytical models of the reconstructed density for the two algorithms agree at second order. Based on similar modeling efforts, we introduce four additional reconstruction algorithms and discuss their performance.

  19. Sensory Recovery Outcome after Digital Nerve Repair in Relation to Different Reconstructive Techniques: Meta-Analysis and Systematic Review

    PubMed Central

    Wolf, Petra; Harder, Yves; Kern, Yasmin; Paprottka, Philipp M.; Machens, Hans-Günther; Lohmeyer, Jörn A.

    2013-01-01

    Good clinical outcome after digital nerve repair is highly relevant for proper hand function and has a significant socioeconomic impact. However, level of evidence for competing surgical techniques is low. The aim is to summarize and compare the outcomes of digital nerve repair with different methods (end-to-end and end-to-side coaptations, nerve grafts, artificial conduit-, vein-, muscle, and muscle-in-vein reconstructions, and replantations) to provide an aid for choosing an individual technique of nerve reconstruction and to create reference values of standard repair for nonrandomized clinical studies. 87 publications including 2,997 nerve repairs were suitable for a precise evaluation. For digital nerve repairs there was practically no particular technique superior to another. Only end-to-side coaptation had an inferior two-point discrimination in comparison to end-to-end coaptation or nerve grafting. Furthermore, this meta-analysis showed that youth was associated with an improved sensory recovery outcome in patients who underwent digital replantation. For end-to-end coaptations, recent publications had significantly better sensory recovery outcomes than older ones. Given minor differences in outcome, the main criteria in choosing an adequate surgical technique should be gap length and donor site morbidity caused by graft material harvesting. Our clinical experience was used to provide a decision tree for digital nerve repair. PMID:23984064

  20. Multi time-step wavefront reconstruction for tomographic adaptive-optics systems.

    PubMed

    Ono, Yoshito H; Akiyama, Masayuki; Oya, Shin; Lardiére, Olivier; Andersen, David R; Correia, Carlos; Jackson, Kate; Bradley, Colin

    2016-04-01

    In tomographic adaptive-optics (AO) systems, errors due to tomographic wavefront reconstruction limit the performance and angular size of the scientific field of view (FoV), where AO correction is effective. We propose a multi time-step tomographic wavefront reconstruction method to reduce the tomographic error by using measurements from both the current and previous time steps simultaneously. We further outline the method to feed the reconstructor with both wind speed and direction of each turbulence layer. An end-to-end numerical simulation, assuming a multi-object AO (MOAO) system on a 30 m aperture telescope, shows that the multi time-step reconstruction increases the Strehl ratio (SR) over a scientific FoV of 10 arc min in diameter by a factor of 1.5-1.8 when compared to the classical tomographic reconstructor, depending on the guide star asterism and with perfect knowledge of wind speeds and directions. We also evaluate the multi time-step reconstruction method and the wind estimation method on the RAVEN demonstrator under laboratory setting conditions. The wind speeds and directions at multiple atmospheric layers are measured successfully in the laboratory experiment by our wind estimation method with errors below 2  ms-1. With these wind estimates, the multi time-step reconstructor increases the SR value by a factor of 1.2-1.5, which is consistent with a prediction from the end-to-end numerical simulation.

  1. Breast Reconstruction

    MedlinePlus

    ... rebuild the shape of the breast. Instead of breast reconstruction, you could choose to wear a breast form ... one woman may not be right for another. Breast reconstruction may be done at the same time as ...

  2. Reconstructing baryon oscillations: A Lagrangian theory perspective

    SciTech Connect

    Padmanabhan, Nikhil; White, Martin; Cohn, J. D.

    2009-03-15

    Recently Eisenstein and collaborators introduced a method to 'reconstruct' the linear power spectrum from a nonlinearly evolved galaxy distribution in order to improve precision in measurements of baryon acoustic oscillations. We reformulate this method within the Lagrangian picture of structure formation, to better understand what such a method does, and what the resulting power spectra are. We show that reconstruction does not reproduce the linear density field, at second order. We however show that it does reduce the damping of the oscillations due to nonlinear structure formation, explaining the improvements seen in simulations. Our results suggest that the reconstructed power spectrum is potentially better modeled as the sum of three different power spectra, each dominating over different wavelength ranges and with different nonlinear damping terms. Finally, we also show that reconstruction reduces the mode-coupling term in the power spectrum, explaining why miscalibrations of the acoustic scale are reduced when one considers the reconstructed power spectrum.

  3. Venous anastomosis in free flap reconstruction after radical neck dissection: is the external jugular vein a feasible option?

    PubMed

    Reiter, Maximilian; Baumeister, Philipp

    2017-01-13

    Free microvascular tissue transfer has become a reliable and wellestablished technique in reconstructive surgery. Success rates greater than 95% are constantly reported in the literature. End-to-end anastomosis to the external jugular vein (EJ) is supposed to be equally successful as anastomosis to the internal jugular vein (IJ) in patients treated with selective neck dissection. No data has been published so far when the IJ had to be resected during neck dissection. The purpose of this study was to evaluate the success rate and complications of end-to-end anastomosis to the EJ in cases of (modified) radical neck dissection with resected IJ. A retrospective mono-center cohort study was performed. All patients with end-to-end anastomosis to either the IJ or EJ-system were reviewed. 423 free-tissue transfers performed between 2009 and 2016 were included. The overall success rate was 97.0% with an anastomotic revision rate due to venous thrombosis of 12.3%. In patients when the IJ had to be resected and the venous anastomosis was performed at the ipsilateral side to the EJ (n = 53), overall flap loss was significantly higher (5/53; 9.4%). The revision rate in these cases was 22.6%. Success rate of anastomosis to the EJ when the ipsilateral IJ was still intact was 100% (n = 20). Success rate when the anastomosis was performed at the contralateral side was 100%. End-to-end anastomosis to the EJ in cases with resected IJ is more likely to result in free flap loss. Furthermore, it is associated with a higher revision rate. Therefore, in cases with resected IJ, we suggest to plan the operation beforehand with anastomosis at the contralateral side whenever possible.

  4. Wavefront reconstruction for extremely large telescopes via CuRe with domain decomposition.

    PubMed

    Rosensteiner, Matthias

    2012-11-01

    The Cumulative Reconstructor is an accurate, extremely fast reconstruction algorithm for Shack-Hartmann wavefront sensor data. But it has shown an unacceptable high noise propagation for large apertures. Therefore, in this paper we describe a domain decomposition approach to deal with this drawback. We show that this adaptation of the algorithm gives the same reconstruction quality as the original algorithm and leads to a significant improvement with respect to noise propagation. The method is combined with an integral control and compared to the classical matrix vector multiplication algorithm on an end-to-end simulation of a single conjugate adaptive optics system. The reconstruction time is 20n (number of subapertures), and the method is parallelizable.

  5. Success of free flap anastomoses performed within the zone of trauma in acute lower limb reconstruction.

    PubMed

    Bendon, Charlotte L; Giele, Henk P

    2016-07-01

    Traditionally, in free flap cover of lower limb injuries, every attempt is made to perform anastomoses proximal to the zone of injury. We report on the success of anastomoses within the zone of trauma, at the level of the fracture, avoiding further dissection and exposure. The records of free flap reconstructions for fractures of the lower extremity at a tertiary trauma centre between 2004 and 2010 were retrospectively reviewed. A total of 48 lower limb fractures required free flap reconstruction, performed at 28 days post injury (0-275 days). Anastomoses were proximal (21), distal (5) or within the zone of trauma (22). There was no significant difference (p > 0.05) in return to theatre, revision of anastomosis or flap survival between groups. Of the 22 performed within the zone of injury, five returned to theatre but only two for revision of anastomosis and 20 (91%) of these flaps survived. Of the 48 free flaps, arterial anastomoses were end to end in 34 (71%) and end to side in 14 (30%). There was no significant difference (p > 0.05) in return to theatre, revision of anastomosis or flap survival between the end-to-end and end-to-side groups. There was a tendency for arterial anastomoses to be performed end to end outside the zone of trauma (23/26) compared to within the zone of trauma (11/22). Our data suggest that free flap anastomoses can be performed safely in the zone of trauma in lower limb injuries.

  6. Comparison of methods for the reduction of reconstructed layers in atmospheric tomography.

    PubMed

    Saxenhuber, Daniela; Auzinger, Günter; Louarn, Miska Le; Helin, Tapio

    2017-04-01

    For the new generation of extremely large telescopes (ELTs), the computational effort for adaptive optics (AO) systems is demanding even for fast reconstruction algorithms. In wide-field AO, atmospheric tomography, i.e., the reconstruction of turbulent atmospheric layers from wavefront sensor data in several directions of view, is the crucial step for an overall reconstruction. Along with the number of deformable mirrors, wavefront sensors and their resolution, as well as the guide star separation, the number of reconstruction layers contributes significantly to the numerical effort. To reduce the computational cost, a sparse reconstruction profile which still yields good reconstruction quality is needed. In this paper, we analyze existing methods and present new approaches to determine optimal layer heights and turbulence weights for the tomographic reconstruction. Two classes of methods are discussed. On the one hand, we have compression methods that downsample a given input profile to fewer layers. Among other methods, a new compression method based on discrete optimization of collecting atmospheric layers to subgroups and the compression by means of conserving turbulence moments is presented. On the other hand, we take a look at a joint optimization of tomographic reconstruction and reconstruction profile during atmospheric tomography, which is independent of any a priori information on the underlying input profile. We analyze and study the qualitative performance of these methods for different input profiles and varying fields of view in an ELT-sized multi-object AO setting on the European Southern Observatory end-to-end simulation tool OCTOPUS.

  7. Popliteal pseudoaneurysm after arthroscopic posterior cruciate ligament reconstruction.

    PubMed

    van Dorp, Karin B; Breugem, Stefan J M; Driessen, Marcel J M

    2014-09-01

    This report presents the case of a 30-year-old motocross (BMX) cyclist with a third-degree posterior cruciate ligament rupture. The technique used for reconstruction was the transtibial single-bundle autologous hamstring technique. Unfortunately, the procedure was complicated by a popliteal pseudoaneurysm, which was located in line with the tibial canal. The pseudoaneurysm was treated with an end-to-end anastomosis and the patient recovered without further complaints. In this case, the popliteal artery was damaged most probably by the edge of the reamer or the guide wire during removal. Vascular complications can be limb- and life-threatening. This case report aims to increase the awareness of this serious complication with a review of the literature.

  8. Popliteal Pseudoaneurysm after Arthroscopic Posterior Cruciate Ligament Reconstruction

    PubMed Central

    Breugem, Stefan J.M.; Driessen, Marcel J.M.

    2014-01-01

    This report presents the case of a 30-year-old motocross (BMX) cyclist with a third-degree posterior cruciate ligament rupture. The technique used for reconstruction was the transtibial single-bundle autologous hamstring technique. Unfortunately, the procedure was complicated by a popliteal pseudoaneurysm, which was located in line with the tibial canal. The pseudoaneurysm was treated with an end-to-end anastomosis and the patient recovered without further complaints. In this case, the popliteal artery was damaged most probably by the edge of the reamer or the guide wire during removal. Vascular complications can be limb- and life-threatening. This case report aims to increase the awareness of this serious complication with a review of the literature. PMID:25229050

  9. Penile Reconstruction

    PubMed Central

    Salgado, Christopher J.; Chim, Harvey; Tang, Jennifer C.; Monstrey, Stan J.; Mardini, Samir

    2011-01-01

    A variety of surgical options exists for penile reconstruction. The key to success of therapy is holistic management of the patient, with attention to the psychological aspects of treatment. In this article, we review reconstructive modalities for various types of penile defects inclusive of partial and total defects as well as the buried penis, and also describe recent basic science advances, which may promise new options for penile reconstruction. PMID:22851914

  10. Primordial power spectrum from Planck

    SciTech Connect

    Hazra, Dhiraj Kumar; Shafieloo, Arman; Souradeep, Tarun E-mail: arman@apctp.org

    2014-11-01

    Using modified Richardson-Lucy algorithm we reconstruct the primordial power spectrum (PPS) from Planck Cosmic Microwave Background (CMB) temperature anisotropy data. In our analysis we use different combinations of angular power spectra from Planck to reconstruct the shape of the primordial power spectrum and locate possible features. Performing an extensive error analysis we found the dip near ℓ ∼ 750–850 represents the most prominent feature in the data. Feature near ℓ ∼ 1800–2000 is detectable with high confidence only in 217 GHz spectrum and is apparently consequence of a small systematic as described in the revised Planck 2013 papers. Fixing the background cosmological parameters and the foreground nuisance parameters to their best fit baseline values, we report that the best fit power law primordial power spectrum is consistent with the reconstructed form of the PPS at 2σ C.L. of the estimated errors (apart from the local features mentioned above). As a consistency test, we found the reconstructed primordial power spectrum from Planck temperature data can also substantially improve the fit to WMAP-9 angular power spectrum data (with respect to power-law form of the PPS) allowing an overall amplitude shift of ∼ 2.5%. In this context low-ℓ and 100 GHz spectrum from Planck which have proper overlap in the multipole range with WMAP data found to be completely consistent with WMAP-9 (allowing amplitude shift). As another important result of our analysis we do report the evidence of gravitational lensing through the reconstruction analysis. Finally we present two smooth form of the PPS containing only the important features. These smooth forms of PPS can provide significant improvements in fitting the data (with respect to the power law PPS) and can be helpful to give hints for inflationary model building.

  11. Primordial power spectrum from Planck

    NASA Astrophysics Data System (ADS)

    Hazra, Dhiraj Kumar; Shafieloo, Arman; Souradeep, Tarun

    2014-11-01

    Using modified Richardson-Lucy algorithm we reconstruct the primordial power spectrum (PPS) from Planck Cosmic Microwave Background (CMB) temperature anisotropy data. In our analysis we use different combinations of angular power spectra from Planck to reconstruct the shape of the primordial power spectrum and locate possible features. Performing an extensive error analysis we found the dip near l ~ 750-850 represents the most prominent feature in the data. Feature near l ~ 1800-2000 is detectable with high confidence only in 217 GHz spectrum and is apparently consequence of a small systematic as described in the revised Planck 2013 papers. Fixing the background cosmological parameters and the foreground nuisance parameters to their best fit baseline values, we report that the best fit power law primordial power spectrum is consistent with the reconstructed form of the PPS at 2σ C.L. of the estimated errors (apart from the local features mentioned above). As a consistency test, we found the reconstructed primordial power spectrum from Planck temperature data can also substantially improve the fit to WMAP-9 angular power spectrum data (with respect to power-law form of the PPS) allowing an overall amplitude shift of ~ 2.5%. In this context low-l and 100 GHz spectrum from Planck which have proper overlap in the multipole range with WMAP data found to be completely consistent with WMAP-9 (allowing amplitude shift). As another important result of our analysis we do report the evidence of gravitational lensing through the reconstruction analysis. Finally we present two smooth form of the PPS containing only the important features. These smooth forms of PPS can provide significant improvements in fitting the data (with respect to the power law PPS) and can be helpful to give hints for inflationary model building.

  12. Teat tip reconstruction by supernumerary teat autotransplantation in cattle.

    PubMed

    Saifzadeh, Siamak; Ardebili, Farhad Farrokhi; Hobbenaghi, Rahim; Farid, Jafar

    2005-01-01

    Evaluation of use of a supernumerary teat as a pedicle graft to repair experimental teat tip damage in cattle. Experimental study. Mature, non-gravid hybrid cows with > or =1 supernumerary teat. The main teat and adjacent supernumerary teat were examined for patency by ultrasound with a 8 MHz linear array transducer. The tip of the main teat was resected at the junction of cistern and canal. The supernumerary teat was partially resected semi-circumferentially at the cranial aspect of the base to maintain vascular supply and transplanted by end-to-end anastomosis. The pedicle of the supernumerary teat graft was amputated in stages starting at 14 days, again at 16 days and separated at 18 days. Reconstructed teat patency was evaluated at intervals by ultrasonography and confirmed at 50 days by histopathology. Repeated measures ANOVA was used to compare the measurements of luminal diameter between days; significance was set at P<.05. All reconstructed teats were patent. Decreased luminal diameters were detected at 25, 32, 39, and 46 days by ultrasonography. On histopathology, granulation and epithelial (mucosal) proliferation contributed to luminal reduction. In this experimental model of an acute damage to a teat tip, supernumerary teat grafting was successfully used to restore teat anatomy. Supernumerary teat pedicle grafting may be considered as a salvage technique for reconstruction of a damaged bovine teat in cows that have an adjacent patent supernumerary teat. Function of the reconstructed teat in a lactating cow remains unknown.

  13. Zellweger Spectrum

    MedlinePlus

    ... Resources Conference News Contact Us Donate The Zellweger Spectrum Zellweger Syndrome, Neonatal Adrenoleukodystrophy (NALD), and Infantile Refsum’s ... of severity of disease. What causes the Zellweger spectrum of diseases? As we mentioned, disorders of the ...

  14. Penile reconstruction

    PubMed Central

    Garaffa, Giulio; Sansalone, Salvatore; Ralph, David J

    2013-01-01

    During the most recent years, a variety of new techniques of penile reconstruction have been described in the literature. This paper focuses on the most recent advances in male genital reconstruction after trauma, excision of benign and malignant disease, in gender reassignment surgery and aphallia with emphasis on surgical technique, cosmetic and functional outcome. PMID:22426595

  15. Assessment of Vascular Injuries and Reconstruction.

    PubMed

    Baghi, Iraj; Herfatkar, Mohammad Rasool; Shokrgozar, Leila; Poor-Rasuli, Zahra; Aghajani, Fatemeh

    2015-11-01

    Trauma is the third leading cause of death. In this regard, vascular injury plays a leading role in of morbidity and mortality rates. The present study aimed to assess the prevalence of vascular injuries and results of vascular reconstruction at a referral hospital in northern Iran. A retrospective observational study assessed 88 consecutive patients with vascular injury admitted to Poursina Hospital, Rasht in northern Iran, from October 2007 to October 2009. All study information was collected retrospectively from hospital charts. Most of the affected patients (87/88) were male with a mean age of 29.12 ± 11.20 years. The mechanism of injury in 39.8% was blunt trauma and penetrating trauma in the rest. Of the 53 injured by penetrating trauma (60.2%), the most common cause was stabbing (94.3%). The most common cause of blunt trauma was road traffic accidents (93.1%). The most common mechanism for vascular injuries in upper extremities was penetrating trauma (86.0%) and in lower extremities was blunt trauma (60.0%). Fasciotomy was performed in 16 patients (18.2%) mostly in the lower extremities. Major amputation was required in 10% of the patients. In upper extremities, the most common type of revascularization was end to end anastomosis, followed by inter-position graft. The most common type of reconstruction in the lower extremity was bypass graft. All patients who underwent major amputation were admitted to the center with a delay of more than 6 hours after injury. Major vascular injuries in our center occurred in young men, frequently because of stab wounds. Popliteal injuries mostly caused by motor vehicle accidents was the second most common arterial injury, followed by combined ulnar and radial injuries. Vascular reconstruction in the first hours after trauma may prevent many unnecessary and preventable amputation procedures.

  16. Fate of the reconstructed carotid artery after extracorporeal membrane oxygenation.

    PubMed

    Levy, M S; Share, J C; Fauza, D O; Wilson, J M

    1995-07-01

    Reconstruction of the right common carotid artery has been shown to be feasible in neonates after extracorporeal membrane oxygenation (ECMO). However, the long-term outcome after carotid artery reconstruction (CAR) remains unknown. The purpose of this study was to evaluate the natural progression of the anastomotic site after CAR. Between February 1990 and June 1993, 201 patients received ECMO. All veno-arterial (VA) ECMO patients (n = 172) were considered candidates for reconstruction unless a significant neurological event (ie, intracranial hemorrhage, stroke) had occurred; the duration of ECMO exceeded 10 days, making carotid mobilization difficult; or the patient's prognosis was deemed poor. Reconstruction was performed by excising the arteriotomy site, followed by primary end-to-end anastomosis. Reconstruction was abandoned and the artery ligated if an intimal flap, arterial thrombosis, or excessive tension was encountered. After reconstruction all patients had early carotid ultrasonography and either head computed tomography (CT) or magnetic resonance imaging (MRI). Subsequent ultrasound examinations were performed at approximately 6-month intervals. Diameter index (DI) (a measure of anastomotic narrowing) was calculated using ultrasound by dividing the anastomotic diameter by the diameter of the carotid artery 5 mm proximal to the anastomosis. Forty-three of 172 VA ECMO patients (25%) had successful reconstruction. Long-term follow-up data were available on 27 patients. These 27 patients had 39 ultrasound examinations, with an average follow-up time of 7.3 months (range, 4 days to 29 months). All carotid arteries were patent. Linear regression analysis showed significant improvement in the DI with time (P = .0001, r2 = .382).(ABSTRACT TRUNCATED AT 250 WORDS)

  17. Ligament reconstruction.

    PubMed

    Glickel, Steven Z; Gupta, Salil

    2006-05-01

    Volar ligament reconstruction is an effective technique for treating symptomatic laxity of the CMC joint of the thumb. The laxity may bea manifestation of generalized ligament laxity,post-traumatic, or metabolic (Ehler-Danlos). There construction reduces the shear forces on the joint that contribute to the development and persistence of inflammation. Although there have been only a few reports of the results of volar ligament reconstruction, the use of the procedure to treat Stage I and Stage II disease gives good to excellent results consistently. More advanced stages of disease are best treated by trapeziectomy, with or without ligament reconstruction.

  18. Iterative initial condition reconstruction

    NASA Astrophysics Data System (ADS)

    Schmittfull, Marcel; Baldauf, Tobias; Zaldarriaga, Matias

    2017-07-01

    Motivated by recent developments in perturbative calculations of the nonlinear evolution of large-scale structure, we present an iterative algorithm to reconstruct the initial conditions in a given volume starting from the dark matter distribution in real space. In our algorithm, objects are first moved back iteratively along estimated potential gradients, with a progressively reduced smoothing scale, until a nearly uniform catalog is obtained. The linear initial density is then estimated as the divergence of the cumulative displacement, with an optional second-order correction. This algorithm should undo nonlinear effects up to one-loop order, including the higher-order infrared resummation piece. We test the method using dark matter simulations in real space. At redshift z =0 , we find that after eight iterations the reconstructed density is more than 95% correlated with the initial density at k ≤0.35 h Mpc-1 . The reconstruction also reduces the power in the difference between reconstructed and initial fields by more than 2 orders of magnitude at k ≤0.2 h Mpc-1 , and it extends the range of scales where the full broadband shape of the power spectrum matches linear theory by a factor of 2-3. As a specific application, we consider measurements of the baryonic acoustic oscillation (BAO) scale that can be improved by reducing the degradation effects of large-scale flows. In our idealized dark matter simulations, the method improves the BAO signal-to-noise ratio by a factor of 2.7 at z =0 and by a factor of 2.5 at z =0.6 , improving standard BAO reconstruction by 70% at z =0 and 30% at z =0.6 , and matching the optimal BAO signal and signal-to-noise ratio of the linear density in the same volume. For BAO, the iterative nature of the reconstruction is the most important aspect.

  19. Iterative reconstruction methods in atmospheric tomography: FEWHA, Kaczmarz and Gradient-based algorithm

    NASA Astrophysics Data System (ADS)

    Ramlau, R.; Saxenhuber, D.; Yudytskiy, M.

    2014-07-01

    The problem of atmospheric tomography arises in ground-based telescope imaging with adaptive optics (AO), where one aims to compensate in real-time for the rapidly changing optical distortions in the atmosphere. Many of these systems depend on a sufficient reconstruction of the turbulence profiles in order to obtain a good correction. Due to steadily growing telescope sizes, there is a strong increase in the computational load for atmospheric reconstruction with current methods, first and foremost the MVM. In this paper we present and compare three novel iterative reconstruction methods. The first iterative approach is the Finite Element- Wavelet Hybrid Algorithm (FEWHA), which combines wavelet-based techniques and conjugate gradient schemes to efficiently and accurately tackle the problem of atmospheric reconstruction. The method is extremely fast, highly flexible and yields superior quality. Another novel iterative reconstruction algorithm is the three step approach which decouples the problem in the reconstruction of the incoming wavefronts, the reconstruction of the turbulent layers (atmospheric tomography) and the computation of the best mirror correction (fitting step). For the atmospheric tomography problem within the three step approach, the Kaczmarz algorithm and the Gradient-based method have been developed. We present a detailed comparison of our reconstructors both in terms of quality and speed performance in the context of a Multi-Object Adaptive Optics (MOAO) system for the E-ELT setting on OCTOPUS, the ESO end-to-end simulation tool.

  20. Optimal reconstruction for closed-loop ground-layer adaptive optics with elongated spots.

    PubMed

    Béchet, Clémentine; Tallon, Michel; Tallon-Bosc, Isabelle; Thiébaut, Éric; Le Louarn, Miska; Clare, Richard M

    2010-11-01

    The design of the laser-guide-star-based adaptive optics (AO) systems for the Extremely Large Telescopes requires careful study of the issue of elongated spots produced on Shack-Hartmann wavefront sensors. The importance of a correct modeling of the nonuniformity and correlations of the noise induced by this elongation has already been demonstrated for wavefront reconstruction. We report here on the first (to our knowledge) end-to-end simulations of closed-loop ground-layer AO with laser guide stars with such an improved noise model. The results are compared with the level of performance predicted by a classical noise model for the reconstruction. The performance is studied in terms of ensquared energy and confirms that, thanks to the improved noise model, central or side launching of the lasers does not affect the performance with respect to the laser guide stars' flux. These two launching schemes also perform similarly whatever the atmospheric turbulence strength.

  1. ACL reconstruction

    MedlinePlus

    ... This increases the chance you may have a meniscus tear. ACL reconstruction may be used for these ... When other ligaments are also injured When your meniscus is torn Before surgery, talk to your health ...

  2. Breast Reconstruction

    MedlinePlus

    ... senos Preguntas Para el Médico Datos Para la Vida Komen El cuidado de sus senos:Consejos útiles ... can help . Cost Federal law requires most insurance plans cover the cost of breast reconstruction. Learn more ...

  3. Unambiguous chirp characterization using modified-spectrum auto-interferometric correlation and pulse spectrum.

    PubMed

    Yellampalle, B; Averitt, R D; Taylor, A J

    2006-09-18

    Modified-spectrum auto-interferometric correlation (MOSAIC), derived from a conventional second order interferometric autocorrelation trace, is a sensitive and visual chirp diagnostic method for ultrashort laser pulses. We construct several pairs of example pulse shapes that have nearly identical MOSAIC traces and demonstrate that chirp ambiguity can result when the field amplitude or spectrum are not known, thus making MOSAIC a qualitative tool for chirped pulses. However, when the pulse spectrum is known, a unique chirp reconstruction is possible. With the help of a new reconstruction technique, we experimentally demonstrate complete pulse characterization using MOSAIC envelopes and the pulse spectrum.

  4. PSF reconstruction for MUSE in wide field mode

    NASA Astrophysics Data System (ADS)

    Villecroze, R.; Fusco, Thierry; Bacon, Roland; Madec, Pierre-Yves

    2012-07-01

    The resolution of ground-based telescopes is dramatically limited by the atmospheric turbulence.. Adaptative optics (AO) is a real-time opto-mechanical approach which allows to correct for the turbulence effect and to reach the ultimate diffraction limit astronomical telescopes and their associated instrumentation. Nevertheless, the AO correction is never perfect especially when it has to deal with large Field of View (FoV). Hence, a posteriori image processing really improves the final estimation of astrophysical data. Such techniques require an accurate knowledge of the system response at any position in the FoV The purpose of this work is then the estimation of the AO response in the particular case of the MUSE [1] /GALACSI [2] instrument (a 3D mult-object spectrograph combined with a Laser-assisted wide field AO system which will be installed at the VLT in 2013). Using telemetry data coming from both AO Laser and natural guide stars, a Point Spread Function (PSF) is derived at any location of the FoV and for every wavelength of the MUSE spectrograph. This document presents the preliminary design of the MUSE WFM PSF reconstruction process. The various hypothesis and approximations are detailed and justified. A first description of the overall process is proposed. Some alternative strategies to improve the performance (in terms of computation time and storage) are described and have been implemented. Finally, after a validation of the proposed algorithm using end-to-end models, a performance analysis is conducted (with the help of a full end-to-end model). This performance analysis will help us to populate an exhaustive error budget table.

  5. Application of the full spectrum inversion algorithm to simulated airborne GPS radio occultation signals

    NASA Astrophysics Data System (ADS)

    Adhikari, Loknath; Xie, Feiqin; Haase, Jennifer S.

    2016-10-01

    With a GPS receiver on board an airplane, the airborne radio occultation (ARO) technique provides dense lower-tropospheric soundings over target regions. Large variations in water vapor in the troposphere cause strong signal multipath, which could lead to systematic errors in RO retrievals with the geometric optics (GO) method. The spaceborne GPS RO community has successfully developed the full-spectrum inversion (FSI) technique to solve the multipath problem. This paper is the first to adapt the FSI technique to retrieve atmospheric properties (bending and refractivity) from ARO signals, where it is necessary to compensate for the receiver traveling on a non-circular trajectory inside the atmosphere, and its use is demonstrated using an end-to-end simulation system. The forward-simulated GPS L1 (1575.42 MHz) signal amplitude and phase are used to test the modified FSI algorithm. The ARO FSI method is capable of reconstructing the fine vertical structure of the moist lower troposphere in the presence of severe multipath, which otherwise leads to large retrieval errors in the GO retrieval. The sensitivity of the modified FSI-retrieved bending angle and refractivity to errors in signal amplitude and errors in the measured refractivity at the receiver is presented. Accurate bending angle retrievals can be obtained from the surface up to ˜ 250 m below the receiver at typical flight altitudes above the tropopause, above which the retrieved bending angle becomes highly sensitive to the phase measurement noise. Abrupt changes in the signal amplitude that are a challenge for receiver tracking and geometric optics bending angle retrieval techniques do not produce any systematic bias in the FSI retrievals when the SNR is high. For very low SNR, the FSI performs as expected from theoretical considerations. The 1 % in situ refractivity measurement errors at the receiver height can introduce a maximum refractivity retrieval error of 0.5 % (1 K) near the receiver, but

  6. Spectrum Recombination.

    ERIC Educational Resources Information Center

    Greenslade, Thomas B., Jr.

    1984-01-01

    Describes several methods of executing lecture demonstrations involving the recombination of the spectrum. Groups the techniques into two general classes: bringing selected portions of the spectrum together using lenses or mirrors and blurring the colors by rapid movement or foreshortening. (JM)

  7. Spectrum Recombination.

    ERIC Educational Resources Information Center

    Greenslade, Thomas B., Jr.

    1984-01-01

    Describes several methods of executing lecture demonstrations involving the recombination of the spectrum. Groups the techniques into two general classes: bringing selected portions of the spectrum together using lenses or mirrors and blurring the colors by rapid movement or foreshortening. (JM)

  8. Polymer adsorption on reconstructed Au(001): A statistical description of P3HT by scanning tunneling microscopy and coarse-grained Monte Carlo simulations

    NASA Astrophysics Data System (ADS)

    Förster, S.; Kohl, E.; Ivanov, M.; Gross, J.; Widdra, W.; Janke, W.

    2014-10-01

    We report on a combined theoretical and experimental characterization of isolated Poly(3-hexylthiophene) (P3HT) chains weakly adsorbed on a reconstructed Au(001) surface. The local chain conformations of in situ deposited P3HT molecules were investigated by means of scanning tunneling microscopy. For comparison, Monte Carlo simulations of the system were performed up to a maximum chain length of 60 monomer units. The dependence of the end-to-end distance and the radius of gyration on the polymer chain length shows a good agreement between experiment and Monte Carlo simulations using simple updates for short chains.

  9. Tracking ocean wave spectrum from SAR images

    NASA Technical Reports Server (NTRS)

    Goldfinger, A. D.; Beal, R. C.; Monaldo, F. M.; Tilley, D. G.

    1984-01-01

    An end to end algorithm for recovery of ocean wave spectral peaks from Synthetic Aperture Radar (SAR) images is described. Current approaches allow precisions of 1 percent in wave number, and 0.6 deg in direction.

  10. Project Reconstruct.

    ERIC Educational Resources Information Center

    Helisek, Harriet; Pratt, Donald

    1994-01-01

    Presents a project in which students monitor their use of trash, input and analyze information via a database and computerized graphs, and "reconstruct" extinct or endangered animals from recyclable materials. The activity was done with second-grade students over a period of three to four weeks. (PR)

  11. Project Reconstruct.

    ERIC Educational Resources Information Center

    Helisek, Harriet; Pratt, Donald

    1994-01-01

    Presents a project in which students monitor their use of trash, input and analyze information via a database and computerized graphs, and "reconstruct" extinct or endangered animals from recyclable materials. The activity was done with second-grade students over a period of three to four weeks. (PR)

  12. Stem cell-based approaches to improve nerve regeneration: potential implications for reconstructive transplantation?

    PubMed

    Khalifian, Saami; Sarhane, Karim A; Tammia, Markus; Ibrahim, Zuhaib; Mao, Hai-Quan; Cooney, Damon S; Shores, Jaimie T; Lee, W P Andrew; Brandacher, Gerald

    2015-02-01

    Reconstructive transplantation has become a viable option to restore form and function after devastating tissue loss. Functional recovery is a key determinant of overall success and critically depends on the quality and pace of nerve regeneration. Several molecular and cell-based therapies have been postulated and tested in pre-clinical animal models to enhance nerve regeneration. Schwann cells remain the mainstay of research focus providing neurotrophic support and signaling cues for regenerating axons. Alternative cell sources such as mesenchymal stem cells and adipose-derived stromal cells have also been tested in pre-clinical animal models and in clinical trials due to their relative ease of harvest, rapid expansion in vitro, minimal immunogenicity, and capacity to integrate and survive within host tissues, thereby overcoming many of the challenges faced by culturing of human Schwann cells and nerve allografting. Induced pluripotent stem cell-derived Schwann cells are of particular interest since they can provide abundant, patient-specific autologous Schwann cells. The majority of experimental evidence on cell-based therapies, however, has been generated using stem cell-seeded nerve guides that were developed to enhance nerve regeneration across "gaps" in neural repair. Although primary end-to-end repair is the preferred method of neurorrhaphy in reconstructive transplantation, mechanistic studies elucidating the principles of cell-based therapies from nerve guidance conduits will form the foundation of further research employing stem cells in end-to-end repair of donor and recipient nerves. This review presents key components of nerve regeneration in reconstructive transplantation and highlights the pre-clinical studies that utilize stem cells to enhance nerve regeneration.

  13. Mechanistic study of hemicucurbit[6]uril formation by step-growth oligomerization and end-to-end cyclization

    NASA Astrophysics Data System (ADS)

    Yoo, In Kee; Kang, Young Kee

    2017-02-01

    The formation of hemicucurbit[6]uril (hCB[6]) from ethyleneurea with formaldehyde in acidic aqueous solution was explored using density functional methods and the implicit solvation model in water. The oligomerization and cyclization barriers were approximately half lower than that of the iminium formation. Thus, the initial iminium formation is the rate-determining step, and the formation of hCB[6] is kinetically and thermodynamically favored in acidic aqueous solution. In particular, the 'alternate' conformation of hCB[6] is enthalpically and entropically preferred over the 'cone' conformation, which is consistent with the crystal structure of hCB[6].

  14. Update on ORNL TRANSFORM Tool: Simulating Multi-Module Advanced Reactor with End-to-End I&C

    SciTech Connect

    Hale, Richard Edward; Fugate, David L.; Cetiner, Sacit M.; Qualls, A. L.

    2015-05-01

    The Small Modular Reactor (SMR) Dynamic System Modeling Tool project is in the fourth year of development. The project is designed to support collaborative modeling and study of various advanced SMR (non-light water cooled reactor) concepts, including the use of multiple coupled reactors at a single site. The focus of this report is the development of a steam generator and drum system model that includes the complex dynamics of typical steam drum systems, the development of instrumentation and controls for the steam generator with drum system model, and the development of multi-reactor module models that reflect the full power reactor innovative small module design concept. The objective of the project is to provide a common simulation environment and baseline modeling resources to facilitate rapid development of dynamic advanced reactor models; ensure consistency among research products within the Instrumentation, Controls, and Human-Machine Interface technical area; and leverage cross-cutting capabilities while minimizing duplication of effort. The combined simulation environment and suite of models are identified as the TRANSFORM tool. The critical elements of this effort include (1) defining a standardized, common simulation environment that can be applied throughout the Advanced Reactors Technology program; (2) developing a library of baseline component modules that can be assembled into full plant models using available geometry, design, and thermal-hydraulic data; (3) defining modeling conventions for interconnecting component models; and (4) establishing user interfaces and support tools to facilitate simulation development (i.e., configuration and parameterization), execution, and results display and capture.

  15. Towards a Software Framework to Support Deployment of Low Cost End-to-End Hydroclimatological Sensor Network

    NASA Astrophysics Data System (ADS)

    Celicourt, P.; Piasecki, M.

    2015-12-01

    Deployment of environmental sensors assemblies based on cheap platforms such as Raspberry Pi and Arduino have gained much attention over the past few years. While they are more attractive due to their ability to be controlled with a few programming language choices, the configuration task can become quite complex due to the need of having to learn several different proprietary data formats and protocols which constitute a bottleneck for the expansion of sensor network. In response to this rising complexity the Institute of Electrical and Electronics Engineers (IEEE) has sponsored the development of the IEEE 1451 standard in an attempt to introduce a common standard. The most innovative concept of the standard is the Transducer Electronic Data Sheet (TEDS) which enables transducers to self-identify, self-describe, self-calibrate, to exhibit plug-and-play functionality, etc. We used Python to develop an IEEE 1451.0 platform-independent graphical user interface to generate and provide sufficient information about almost ANY sensor and sensor platforms for sensor programming purposes, automatic calibration of sensors data, incorporation of back-end demands on data management in TEDS for automatic standard-based data storage, search and discovery purposes. These features are paramount to make data management much less onerous in large scale sensor network. Along with the TEDS Creator, we developed a tool namely HydroUnits for three specific purposes: encoding of physical units in the TEDS, dimensional analysis, and on-the-fly conversion of time series allowing users to retrieve data in a desired equivalent unit while accommodating unforeseen and user-defined units. In addition, our back-end data management comprises the Python/Django equivalent of the CUAHSI Observations Data Model (ODM) namely DjangODM that will be hosted by a MongoDB Database Server which offers more convenience for our application. We are also developing a data which will be paired with the data autoloading capability of Django and a TEDS processing script to populate the database with the incoming data. The Python WaterOneFlow Web Services developed by the Texas Water Development Board will be used to publish the data. The software suite is being tested on the Raspberry Pi as end node and a laptop PC as the base station in a wireless setting.

  16. An integrated he