78 FR 44096 - Endangered Species; File No. 17381

Federal Register 2010, 2011, 2012, 2013, 2014

2013-07-23

..., Ph.D., United States Geological Survey, Southeast Ecological Science Center, 3205 College Avenue, Davie, FL 33314 has been issued a permit to take listed sea turtles for purposes of scientific research... a request for a scientific research permit to take green (Chelonia mydas), loggerhead (Caretta...

76 FR 1405 - Endangered Species

Federal Register 2010, 2011, 2012, 2013, 2014

2011-01-10

... NMFS Northeast Fisheries Science Center, Woods Hole, MA has been issued a permit to take loggerhead... mydas), and hawksbill (Eretmochelys imbricata) sea turtles for purposes of scientific research... threatened species, and (3) is consistent with the purposes and policies set forth in section 2 of the ESA...

Use of Dry Tortugas National Park by threatened and endangered marine turtles: Chapter 5

USGS Publications Warehouse

Hart, Kristin M.; Fujisaki, Ikuko; Sartain-Iverson, Autumn R.

2012-01-01

Satellite and acoustic tracking results for green turtles, hawksbills, and loggerheads have revealed patterns in the proportion of time that tagged turtles spend within various zones of the park, including the RNA. Green turtles primarily utilize the shallow areas in the northern portion of the park. Hawksbills were mostly observed near Garden Key and loggerheads were observed throughout DRTO. Our record of turtle captures, recaptures, and sightings over the last 4 years serves as a baseline database for understanding the size classes of each species present in the park, as well as species-specific habitats in DRTO waters.

78 FR 22239 - Endangered Species; File No. 16556

Federal Register 2010, 2011, 2012, 2013, 2014

2013-04-15

... Fisheries Science Center (NEFSC; Responsible Party: Dr. William Karp), 166 Water St., Woods Hole, MA 02543... research. ADDRESSES: The permit and related documents are available for review upon written request or by... request for a scientific research permit to take loggerhead, leatherback, Kemp's ridley, and green sea...

78 FR 59657 - Endangered Species; File No. 17304

Federal Register 2010, 2011, 2012, 2013, 2014

2013-09-27

..., Ph.D., U.S. Geological Survey, 3205 College Ave., Davie, Florida, 33314 has been issued a permit to... kempii), and green (Chelonia mydas) sea turtles for purposes of scientific research. ADDRESSES: The... scientific research permit to take loggerhead, green, hawksbill, and Kemp's ridley sea turtles had been...

Physiological ramifications for loggerhead turtles captured in pelagic longlines

PubMed Central

Williard, Amanda; Parga, Mariluz; Sagarminaga, Ricardo; Swimmer, Yonat

2015-01-01

Bycatch of endangered loggerhead turtles in longline fisheries results in high rates of post-release mortality that may negatively impact populations. The factors contributing to post-release mortality have not been well studied, but traumatic injuries and physiological disturbances experienced as a result of capture are thought to play a role. The goal of our study was to gauge the physiological status of loggerhead turtles immediately upon removal from longline gear in order to refine our understanding of the impacts of capture and the potential for post-release mortality. We analysed blood samples collected from longline- and hand-captured loggerhead turtles, and discovered that capture in longline gear results in blood loss, induction of the systemic stress response, and a moderate increase in lactate. The method by which turtles are landed and released, particularly if released with the hook or line still attached, may exacerbate stress and lead to chronic injuries, sublethal effects or delayed mortality. Our study is the first, to the best of our knowledge, to document the physiological impacts of capture in longline gear, and our findings underscore the importance of best practices gear removal to promote post-release survival in longline-captured turtles. PMID:26490415

Physiological ramifications for loggerhead turtles captured in pelagic longlines.

PubMed

Williard, Amanda; Parga, Mariluz; Sagarminaga, Ricardo; Swimmer, Yonat

2015-10-01

Bycatch of endangered loggerhead turtles in longline fisheries results in high rates of post-release mortality that may negatively impact populations. The factors contributing to post-release mortality have not been well studied, but traumatic injuries and physiological disturbances experienced as a result of capture are thought to play a role. The goal of our study was to gauge the physiological status of loggerhead turtles immediately upon removal from longline gear in order to refine our understanding of the impacts of capture and the potential for post-release mortality. We analysed blood samples collected from longline- and hand-captured loggerhead turtles, and discovered that capture in longline gear results in blood loss, induction of the systemic stress response, and a moderate increase in lactate. The method by which turtles are landed and released, particularly if released with the hook or line still attached, may exacerbate stress and lead to chronic injuries, sublethal effects or delayed mortality. Our study is the first, to the best of our knowledge, to document the physiological impacts of capture in longline gear, and our findings underscore the importance of best practices gear removal to promote post-release survival in longline-captured turtles. © 2015 The Author(s).

Inclusion bodies in loggerhead erythrocytes are associated with unstable hemoglobin and resemble human Heinz bodies.

PubMed

Basile, Filomena; Di Santi, Annalisa; Caldora, Mercedes; Ferretti, Luigi; Bentivegna, Flegra; Pica, Alessandra

2011-08-01

The aim of this study was to clarify the role of the erythrocyte inclusions found during the hematological screening of loggerhead population of the Mediterranean Sea. We studied the erythrocyte inclusions in blood specimens collected from six juvenile and nine adult specimens of the loggerhead turtle, Caretta caretta, from the Adriatic and Tyrrhenian Seas. Our study indicates that the percentage of mature erythrocytes containing inclusions ranged from 3 to 82%. Each erythrocyte contained only one round inclusion body. Inclusion bodies stained with May Grünwald-Giemsa show that their cytochemical and ultrastructure characteristics are identical to those of human Heinz bodies. Because Heinz bodies originate from the precipitation of unstable hemoglobin (Hb) and cause globular osmotic resistance to increase, we analyzed loggerhead Hb using electrophoresis and high-performance liquid chromatography to detect and quantitate Hb fractions. We also tested the resistance of Hb to alkaline pH, heat, isopropanol denaturation, and globular osmosis. Our hemogram results excluded the occurrence of any infection, which could be associated with an inclusion body, in all the specimens. Negative Feulgen staining indicated that the inclusion bodies are not derived from DNA fragmentation. We hypothesize that amino acid substitutions could explain why loggerhead Hb precipitates under normal physiologic conditions, forming Heinz bodies. The identification of inclusion bodies in loggerhead erythrocytes allow us to better understand the haematological characteristics and the physiology of these ancient reptiles, thus aiding efforts to conserve such an endangered species. Copyright © 2011 Wiley-Liss, Inc., A Wiley Company.

75 FR 33578 - Endangered Species; File Nos. 14508 and 14655

Federal Register 2010, 2011, 2012, 2013, 2014

2010-06-14

... (Lepidochelys kempii) sea turtles for purposes of scientific research. ADDRESSES: The permit and related... abundance, genetic origin and feeding ecology of sea turtles using Lake Worth Lagoon in Palm Beach County, Florida. Up to 50 green, 5 loggerhead, 2 hawksbill, and 1 Kemp's ridley sea turtles may be captured...

78 FR 29114 - Endangered Species; File No. 17304

Federal Register 2010, 2011, 2012, 2013, 2014

2013-05-17

... Kristen Hart, Ph.D., U.S. Geological Survey, has applied in due form for a permit to take loggerhead... (Chelonia mydas) sea turtles for purposes of scientific research. DATES: Written, telefaxed, or email... species (50 CFR parts 222-226). The applicant requests a five-year research permit to determine...

Analysis of chorioallantoic membranes to assess PCB accumulation in American alligators and Loggerhead sea turtles from the coast of South Carolina

DOE Office of Scientific and Technical Information (OSTI.GOV)

Cobb, G.P.; Wood, P.D.; O`Quinn, M.

1995-12-31

Investigation of contaminant burdens in threatened and endangered species is difficult due to the small number of samples that can be collected. Many samples can be collected if the sampling methods are non-lethal and more specifically non-invasive. Analysis of chorioallantoic membranes is demonstrated for American alligators and Loggerhead sea turtles. Significant differences were found in PCB, uptake by alligators from the Ashepoo-Combahee-Edisto Basin reference site and a contaminated site in Winyah Bay. Intrasite and intersite differences in uptake and distribution of PCB homologues were noted. These data will be discussed as they relate to egg viability and embryo development.

Learning with Loggerheads

ERIC Educational Resources Information Center

Lener, Christine; Pinou, Theodora

2007-01-01

Kids tracking sea turtles? No, it's not a description for a new nature show on TV, it's a lesson, and it could be happening in your classroom! Sea turtle biologists worldwide are currently working together to track turtles to learn about sea turtle behavior and migration in an effort to conserve these endangered animals. A unit was developed using…

A Model of Loggerhead Sea Turtle (Caretta caretta) Habitat and Movement in the Oceanic North Pacific

PubMed Central

Abecassis, Melanie; Senina, Inna; Lehodey, Patrick; Gaspar, Philippe; Parker, Denise; Balazs, George; Polovina, Jeffrey

2013-01-01

Habitat preferences for juvenile loggerhead turtles in the North Pacific were investigated with data from two several-year long tagging programs, using 224 satellite transmitters deployed on wild and captive-reared turtles. Animals ranged between 23 and 81 cm in straight carapace length. Tracks were used to investigate changes in temperature preferences and speed of the animals with size. Average sea surface temperatures along the tracks ranged from 18 to 23 °C. Bigger turtles generally experienced larger temperature ranges and were encountered in warmer surface waters. Seasonal differences between small and big turtles suggest that the larger ones dive deeper than the mixed layer and subsequently target warmer surface waters to rewarm. Average swimming speeds were under 1 km/h and increased with size for turtles bigger than 30 cm. However, when expressed in body lengths per second (bl s−1), smaller turtles showed much higher swimming speeds (>1 bl s −1) than bigger ones (0.5 bl s−1). Temperature and speed values at size estimated from the tracks were used to parameterize a habitat-based Eulerian model to predict areas of highest probability of presence in the North Pacific. The model-generated habitat index generally matched the tracks closely, capturing the north-south movements of tracked animals, but the model failed to replicate observed east-west movements, suggesting temperature and foraging preferences are not the only factors driving large-scale loggerhead movements. Model outputs could inform potential bycatch reduction strategies. PMID:24039901

75 FR 12597 - Endangered and Threatened Species; Proposed Listing of Nine Distinct Population Segments of...

Federal Register 2010, 2011, 2012, 2013, 2014

2010-03-16

... result in a significant gap in the range of the taxon; (c) evidence that the discrete segment represents... appear to have shaped the evolution of these two matriarchal lineages with the onset of glacial cycles...-directional invasion by the temperate-adapted loggerheads into the respective basins (Bowen et al., 1994; J.S...

Modeling loggerhead turtle movement in the Mediterranean: importance of body size and oceanography.

PubMed

Eckert, Scott A; Moore, Jeffrey E; Dunn, Daniel C; van Buiten, Ricardo Sagarminaga; Eckert, Karen L; Halpin, Patrick N

2008-03-01

Adapting state-space models (SSMs) to telemetry data has been helpful for dealing with location error and for modeling animal movements. We used a combination of two hierarchical Bayesian SSMs to estimate movement pathways from Argos satellite-tag data for 15 juvenile loggerhead turtles (Caretta caretta) in the western Mediterranean Sea, and to probabilistically assign locations to one of two behavioral movement types and relate those behaviors to environmental features. A Monte Carlo procedure helped propagate location uncertainty from the first SSM into the estimation of behavioral states and environment--behavior relationships in the second SSM. Turtles using oceanic habitats of the Balearic Sea (n = 9 turtles) within the western Mediterranean were more likely to exhibit "intensive search" behavior as might occur during foraging, but only larger turtles responded to variations in sea-surface height. This suggests that they were better able than smaller turtles to cue on environmental features that concentrate prey resources or were more dependent on high-quality feeding areas. These findings stress the importance of individual heterogeneity in the analysis of movement behavior and, taken in concert with descriptive studies of Pacific loggerheads, suggest that directed movements toward patchy ephemeral resources may be a general property of larger juvenile loggerheads in different populations. We discovered size-based variation in loggerhead distribution and documented use of the western Mediterranean Sea by turtles larger than previously thought to occur there. With one exception, only individuals > 57 cm curved carapace length used the most westerly basin in the Mediterranean (western Alborán Sea). These observations shed new light on loggerhead migration phenology.

Hierarchical modeling of bycatch rates of sea turtles in the western North Atlantic

USGS Publications Warehouse

Gardner, B.; Sullivan, P.J.; Epperly, S.; Morreale, S.J.

2008-01-01

Previous studies indicate that the locations of the endangered loggerhead Caretta caretta and critically endangered leatherback Dermochelys coriacea sea turtles are influenced by water temperatures, and that incidental catch rates in the pelagic longline fishery vary by region. We present a Bayesian hierarchical model to examine the effects of environmental variables, including water temperature, on the number of sea turtles captured in the US pelagic longline fishery in the western North Atlantic. The modeling structure is highly flexible, utilizes a Bayesian model selection technique, and is fully implemented in the software program WinBUGS. The number of sea turtles captured is modeled as a zero-inflated Poisson distribution and the model incorporates fixed effects to examine region-specific differences in the parameter estimates. Results indicate that water temperature, region, bottom depth, and target species are all significant predictors of the number of loggerhead sea turtles captured. For leatherback sea turtles, the model with only target species had the most posterior model weight, though a re-parameterization of the model indicates that temperature influences the zero-inflation parameter. The relationship between the number of sea turtles captured and the variables of interest all varied by region. This suggests that management decisions aimed at reducing sea turtle bycatch may be more effective if they are spatially explicit. ?? Inter-Research 2008.

Spatial and temporal statistical analysis of bycatch data: Patterns of sea turtle bycatch in the North Atlantic

USGS Publications Warehouse

Gardner, B.; Sullivan, P.J.; Morreale, S.J.; Epperly, S.P.

2008-01-01

Loggerhead (Caretta caretta) and leatherback (Dermochelys coriacea) sea turtle distributions and movements in offshore waters of the western North Atlantic are not well understood despite continued efforts to monitor, survey, and observe them. Loggerhead and leatherback sea turtles are listed as endangered by the World Conservation Union, and thus anthropogenic mortality of these species, including fishing, is of elevated interest. This study quantifies spatial and temporal patterns of sea turtle bycatch distributions to identify potential processes influencing their locations. A Ripley's K function analysis was employed on the NOAA Fisheries Atlantic Pelagic Longline Observer Program data to determine spatial, temporal, and spatio-temporal patterns of sea turtle bycatch distributions within the pattern of the pelagic fishery distribution. Results indicate that loggerhead and leatherback sea turtle catch distributions change seasonally, with patterns of spatial clustering appearing from July through October. The results from the space-time analysis indicate that sea turtle catch distributions are related on a relatively fine scale (30-200 km and 1-5 days). The use of spatial and temporal point pattern analysis, particularly K function analysis, is a novel way to examine bycatch data and can be used to inform fishing practices such that fishing could still occur while minimizing sea turtle bycatch. ?? 2008 NRC.

78 FR 43005 - Endangered and Threatened Species: Designation of Critical Habitat for the Northwest Atlantic...

Federal Register 2010, 2011, 2012, 2013, 2014

2013-07-18

...We, the National Marine Fisheries Service (NMFS), propose critical habitat for the Northwest Atlantic Ocean loggerhead sea turtle Distinct Population Segment (DPS) (Caretta caretta) within the Atlantic Ocean and the Gulf of Mexico. Specific areas proposed for designation include 36 occupied marine areas within the range of the Northwest Atlantic Ocean DPS. These areas contain one or a combination of nearshore reproductive habitat, winter area, breeding areas, and migratory corridors. We are also asking for comment on whether to include as critical habitat in the final rule some areas that contain foraging habitat and two large areas that contain Sargassum habitat. The U.S. Fish and Wildlife Service addressed terrestrial areas (nesting beaches) in a separate document. No marine areas meeting the definition of critical habitat were identified within the jurisdiction of the United States for the North Pacific Ocean DPS, and therefore we are not proposing to designate critical habitat for that DPS. We are soliciting comments from the public on all aspects of the proposal, including information on the economic, national security, and other relevant impacts. We will consider additional information received prior to making a final designation.

Endangered Species in the Pacific Northwest.

ERIC Educational Resources Information Center

Clearing: Nature and Learning in the Pacific Northwest, 1985

1985-01-01

Suggests that students can learn how society works by studying threatened and endangered plant and animal species which occur in the local environments. Pictures, descriptions, habitats, and niche information are given for 21 threatened or endangered species of the Pacific Northwest. (DH)

Microplastic at nesting grounds used by the northern Gulf of Mexico loggerhead recovery unit.

PubMed

Beckwith, Valencia K; Fuentes, Mariana M P B

2018-06-01

Microplastics can impact key habitats used by endangered species, such as marine turtles. They impact the environment by transporting toxicants and altering sediment properties affecting temperature and sediment permeability. Our study determined the exposure of the ten most important nesting sites for the Northern Gulf of Mexico Loggerhead Recovery Unit to microplastic. Sand samples were obtained at each nesting site during the 2017 nesting season and analyzed for abundance and characteristics of microplastic. Microplastic was found at all sites, with an average abundance of 61.08 ± 34.61 pieces/m 2 , and 59.9% located at the dunes, where turtles primarily nest. A gradual decrease in microplastics abundance was observed from the most western nesting ground to the east. The results from this study indicate that microplastic accumulation on nesting sites for the Northern Gulf of Mexico may be of great concern, and could negatively affect the incubating environment for marine turtles. Copyright © 2018 Elsevier Ltd. All rights reserved.

Estimating the population size of island loggerhead shrikes on Santa Rosa and Santa Cruz Islands, USA

USGS Publications Warehouse

Stanley, Thomas R.; Teel, Susan; Hall, Linnea S.; Dye, Linda C.; Laughrin, Lyndal L.

2012-01-01

Island loggerhead shrikes (Lanius ludovicianus anthonyi) are an endemic, genetically distinct subspecies of loggerhead shrike on California’s Santa Rosa and Santa Cruz Islands. This subspecies is listed as a Species of Special Concern by the California Department of Fish and Game and has been petitioned for federal listing under the Endangered Species Act. Because of suspected low numbers and the possibility of federal listing, there was an urgent need to rigorously estimate the number of remaining individuals on the Islands. In 2009 and 2010, biologists from the U.S. Geological Survey and the National Park Service surveyed sample units on Santa Rosa and Santa Cruz Islands using a double-observer method with independent observers, where units were selected under a stratified random sampling design. Shrike abundance was estimated to be 169 in 2009 and 240 in 2010 for Santa Rosa Island, and 35 in 2009 and 42 in 2010 for Santa Cruz Island. These numbers, especially for Santa Rosa Island, are higher than previously reported but nevertheless are still low. Rapid vegetation change on both islands due to recent removal of non-native herbivores may threaten the habitat and status of this subspecies. In view of this circumstance and the still-low numbers of shrikes, additional intensive demographic and habitat-use studies are critical for obtaining information vital for the perpetuation of this subspecies.

Stormy oceans are associated with declines in sea turtle hatching.

PubMed

Van Houtan, Kyle S; Bass, Oron L

2007-08-07

Many sea turtle populations are below 10% of their pre-Columbian numbers [1-4]. Though historic and systematic over-exploitation is the principal cause of these declines, sea turtles face similar threats today. Adults and juveniles are actively hunted and commercial fisheries catch them incidentally. Nesting suffers from beach development, egg poaching and the poaching of nesting females. Accompanying these familiar hazards is the largely unknown consequences of recent climate change. Here we report monitoring surveys from the Dry Tortugas National Park (DTNP, 24.64N 82.86W), Florida, and show that hurricanes and other storm events are an additional and increasing threat to loggerhead turtle (Caretta caretta) and green sea turtle (Chelonia mydas) nesting. Both species are listed by the US Endangered Species Act and the IUCN considers them 'endangered'.

KSC-2014-2918

NASA Image and Video Library

2014-06-13

CAPE CANAVERAL, Fla. -- A gopher tortoise lumbers down the roadway at NASA's Kennedy Space Center in Florida. Gopher tortoises are dry-land turtles that live in scrub, dry hammock, pine flatwood, coastal grassland and dune habitats. The undeveloped property on Kennedy Space Center is managed by the U.S. Fish and Wildlife Service through the Merritt Island National Wildlife Refuge. Currently, gopher tortoises are protected in some states by federal law under the Endangered Species Act ESA. The refuge provides a habitat for 14 species federally listed as threatened or endangered, including the leatherback, green, Kemps Ridley, loggerhead and Atlantic hawksbill turtles. For information on the refuge, visit http://www.fws.gov/merrittisland/Index.html. For more information on the gopher tortoise, visit http://www.fws.gov/northflorida/GopherTortoise/Gopher_Tortoise_Fact_Sheet.html. Photo credit: NASA/Daniel Casper

Long-Term Climate Forcing in Loggerhead Sea Turtle Nesting

PubMed Central

Van Houtan, Kyle S.; Halley, John M.

2011-01-01

The long-term variability of marine turtle populations remains poorly understood, limiting science and management. Here we use basin-scale climate indices and regional surface temperatures to estimate loggerhead sea turtle (Caretta caretta) nesting at a variety of spatial and temporal scales. Borrowing from fisheries research, our models investigate how oceanographic processes influence juvenile recruitment and regulate population dynamics. This novel approach finds local populations in the North Pacific and Northwest Atlantic are regionally synchronized and strongly correlated to ocean conditions—such that climate models alone explain up to 88% of the observed changes over the past several decades. In addition to its performance, climate-based modeling also provides mechanistic forecasts of historical and future population changes. Hindcasts in both regions indicate climatic conditions may have been a factor in recent declines, but future forecasts are mixed. Available climatic data suggests the Pacific population will be significantly reduced by 2040, but indicates the Atlantic population may increase substantially. These results do not exonerate anthropogenic impacts, but highlight the significance of bottom-up oceanographic processes to marine organisms. Future studies should consider environmental baselines in assessments of marine turtle population variability and persistence. PMID:21589639

Long-term climate forcing in loggerhead sea turtle nesting.

PubMed

Van Houtan, Kyle S; Halley, John M

2011-04-27

The long-term variability of marine turtle populations remains poorly understood, limiting science and management. Here we use basin-scale climate indices and regional surface temperatures to estimate loggerhead sea turtle (Caretta caretta) nesting at a variety of spatial and temporal scales. Borrowing from fisheries research, our models investigate how oceanographic processes influence juvenile recruitment and regulate population dynamics. This novel approach finds local populations in the North Pacific and Northwest Atlantic are regionally synchronized and strongly correlated to ocean conditions--such that climate models alone explain up to 88% of the observed changes over the past several decades. In addition to its performance, climate-based modeling also provides mechanistic forecasts of historical and future population changes. Hindcasts in both regions indicate climatic conditions may have been a factor in recent declines, but future forecasts are mixed. Available climatic data suggests the Pacific population will be significantly reduced by 2040, but indicates the Atlantic population may increase substantially. These results do not exonerate anthropogenic impacts, but highlight the significance of bottom-up oceanographic processes to marine organisms. Future studies should consider environmental baselines in assessments of marine turtle population variability and persistence.

Estimating At-Sea Mortality of Marine Turtles from Stranding Frequencies and Drifter Experiments

PubMed Central

Koch, Volker; Peckham, Hoyt; Mancini, Agnese; Eguchi, Tomoharu

2013-01-01

Strandings of marine megafauna can provide valuable information on cause of death at sea. However, as stranding probabilities are usually very low and highly variable in space and time, interpreting the results can be challenging. We evaluated the magnitude and distribution of at-sea mortality of marine turtles along the Pacific coast of Baja California Sur, México during 2010–11, using a combination of counting stranded animals and drifter experiments. A total of 594 carcasses were found during the study period, with loggerhead (62%) and green turtles (31%) being the most common species. 87% of the strandings occurred in the southern Gulf of Ulloa, a known hotspot of loggerhead distribution in the Eastern Pacific. While only 1.8% of the deaths could be definitively attributed to bycatch (net marks, hooks), seasonal variation in stranding frequencies closely corresponded to the main fishing seasons. Estimated stranding probabilities from drifter experiments varied among sites and trials (0.05–0.8), implying that only a fraction of dead sea turtles can be observed at beaches. Total mortality estimates for 15-day periods around the floater trials were highest for PSL, a beach in the southern Gulf of Ulloa, ranging between 11 sea turtles in October 2011 to 107 in August 2010. Loggerhead turtles were the most numerous, followed by green and olive ridley turtles. Our study showed that drifter trials combined with beach monitoring can provide estimates for death at sea to measure the impact of small-scale fisheries that are notoriously difficult to monitor for by-catch. We also provided recommendations to improve the precision of the mortality estimates for future studies and highlight the importance of estimating impacts of small–scale fisheries on marine megafauna. PMID:23483880

KSC-2014-2854

NASA Image and Video Library

2014-06-04

CAPE CANAVERAL, Fla. -- A gopher tortoise stops for lunch beside the Launch Pad 39B beach road on NASA's Kennedy Space Center in Florida. Gopher tortoises are dry-land turtles that live in scrub, dry hammock, pine flatwood, coastal grassland and dune habitats. The undeveloped property on Kennedy Space Center is managed by the U.S. Fish and Wildlife Service through the Merritt Island National Wildlife Refuge. Currently, gopher tortoises are protected in some states by federal law under the Endangered Species Act ESA. The refuge provides a habitat for 14 species federally listed as threatened or endangered, including the leatherback, green, Kemps Ridley, loggerhead and Atlantic hawksbill turtles. For information on the refuge, visit http://www.fws.gov/merrittisland/Index.html. For more information on the gopher tortoise, visit http://www.fws.gov/northflorida/GopherTortoise/Gopher_Tortoise_Fact_Sheet.html. Photo credit: NASA/Daniel Casper

KSC-2014-2852

NASA Image and Video Library

2014-06-04

CAPE CANAVERAL, Fla. -- A gopher tortoise ambles along the Launch Pad 39B beach road on NASA's Kennedy Space Center in Florida. Gopher tortoises are dry-land turtles that live in scrub, dry hammock, pine flatwood, coastal grassland and dune habitats. The undeveloped property on Kennedy Space Center is managed by the U.S. Fish and Wildlife Service through the Merritt Island National Wildlife Refuge. Currently, gopher tortoises are protected in some states by federal law under the Endangered Species Act ESA. The refuge provides a habitat for 14 species federally listed as threatened or endangered, including the leatherback, green, Kemps Ridley, loggerhead and Atlantic hawksbill turtles. For information on the refuge, visit http://www.fws.gov/merrittisland/Index.html. For more information on the gopher tortoise, visit http://www.fws.gov/northflorida/GopherTortoise/Gopher_Tortoise_Fact_Sheet.html. Photo credit: NASA/Daniel Casper

Evaluation of immune functions in captive immature loggerhead sea turtles (Caretta caretta).

PubMed

Rousselet, Estelle; Levin, Milton; Gebhard, Erika; Higgins, Benjamin M; DeGuise, Sylvain; Godard-Codding, Céline A J

2013-11-15

Sea turtles face numerous environmental challenges, such as exposure to chemical pollution and biotoxins, which may contribute to immune system impairment, resulting in increased disease susceptibility. Therefore, a more thorough assessment of the host's immune response and its susceptibility is needed for these threatened and endangered animals. In this study, the innate and acquired immune functions of sixty-five clinically healthy, immature, captive loggerhead sea turtles (Caretta caretta) were assayed using non-lethal blood sample collection. Functional immune assays were developed and/or optimized for this species, including mitogen-induced lymphocyte proliferation, natural killer (NK) cell activity, phagocytosis, and respiratory burst. Peripheral blood mononuclear cells (PBMC) and phagocytes were isolated by density gradient centrifugation on Ficoll-Paque and discontinuous Percoll gradients, respectively. The T lymphocyte mitogens ConA significantly induced lymphocyte proliferation at 1 and 2 μg/mL while PHA significantly induced lymphocyte proliferation at 5 and 10 μg/mL. The B lymphocyte mitogen LPS significantly induced proliferation at 1 μg/mL. Monocytes demonstrated higher phagocytic activity than eosinophils. In addition, monocytes exhibited respiratory burst. Natural killer cell activity was higher against YAC-1 than K-562 target cells. These optimized assays may help to evaluate the integrity of loggerhead sea turtle's immune system upon exposure to environmental contaminants, as well as part of a comprehensive health assessment and monitoring program. Copyright © 2013 Elsevier B.V. All rights reserved.

76 FR 16045 - Endangered and Threatened Wildlife and Plants; Revised Critical Habitat for the Pacific Coast...

Federal Register 2010, 2011, 2012, 2013, 2014

2011-03-22

... Endangered and Threatened Wildlife and Plants; Revised Critical Habitat for the Pacific Coast Population of... Wildlife and Plants; Revised Critical Habitat for the Pacific Coast Population of the Western Snowy Plover... the best scientific and commercial data available and be as accurate and as effective as possible...

Management of severe head injury with brain exposure in three loggerhead sea turtles Caretta caretta.

PubMed

Franchini, D; Cavaliere, L; Valastro, C; Carnevali, F; van der Esch, A; Lai, O; Di Bello, A

2016-05-03

The loggerhead Caretta caretta is the most common sea turtle in the Mediterranean. Currently, sea turtles are considered endangered, mainly due to the impact of human activities. Among traumatic lesions, those involving the skull, if complicated by brain exposure, are often life-threatening. In these cases, death could be the outcome of direct trauma of the cerebral tissue or of secondary meningoencephalitis. This uncontrolled study aims to evaluate the use of a plant-derived dressing (1 Primary Wound Dressing®) in 3 sea turtles with severe lesions of the skull exposing the brain. Following surgical curettage, the treatment protocol involved exclusive use of the plant-derived dressing applied on the wound surface as the primary dressing, daily for the first month and then every other day until the end of treatment. The wound and peri-wound skin were covered with a simple secondary dressing without any active compound (non-woven gauze with petroleum jelly). Data presented herein show an excellent healing process in all 3 cases and no side effects due to contact of the medication with the cerebral tissue.

Coastal leatherback turtles reveal conservation hotspot

PubMed Central

Robinson, Nathan J.; Morreale, Stephen J.; Nel, Ronel; Paladino, Frank V.

2016-01-01

Previous studies have shown that the world’s largest reptile – the leatherback turtle Dermochelys coriacea – conducts flexible foraging migrations that can cover thousands of kilometres between nesting sites and distant foraging areas. The vast distances that may be travelled by migrating leatherback turtles have greatly complicated conservation efforts for this species worldwide. However, we demonstrate, using a combination of satellite telemetry and stable isotope analysis, that approximately half of the nesting leatherbacks from an important rookery in South Africa do not migrate to distant foraging areas, but rather, forage in the coastal waters of the nearby Mozambique Channel. Moreover, this coastal cohort appears to remain resident year-round in shallow waters (<50 m depth) in a relatively fixed area. Stable isotope analyses further indicate that the Mozambique Channel also hosts large numbers of loggerhead turtles Caretta caretta. The rare presence of a resident coastal aggregation of leatherback turtles not only presents a unique opportunity for conservation, but alongside the presence of loggerhead turtles and other endangered marine megafauna in the Mozambique Channel, highlights the importance of this area as a marine biodiversity hotspot. PMID:27886262

Biochemical indices and life traits of loggerhead turtles (Caretta caretta) from Cape Verde Islands.

PubMed

Vieira, Sara; Martins, Samir; Hawkes, Lucy A; Marco, Adolfo; Teodósio, M Alexandra

2014-01-01

The loggerhead turtle (Caretta caretta) is an endangered marine reptile for whom assessing population health requires knowledge of demographic parameters such as individual growth rate. In Cape Verde, as within several populations, adult female loggerhead sea turtles show a size-related behavioral and trophic dichotomy. While smaller females are associated with oceanic habitats, larger females tend to feed in neritic habitats, which is reflected in their physiological condition and in their offspring. The ratio of RNA/DNA provides a measure of cellular protein synthesis capacity, which varies depending on changes in environmental conditions such as temperature and food availability. The purpose of this study was to evaluate the combined use of morphometric data and biochemical indices as predictors of the physiological condition of the females of distinct sizes and hatchlings during their nesting season and how temperature may influence the physiological condition on the offspring. Here we employed biochemical indices based on nucleic acid derived indices (standardized RNA/DNA ratio-sRD, RNA concentration and DNA concentration) in skin tissue as a potential predictor of recent growth rate in nesting females and hatchling loggerhead turtles. Our major findings were that the physiological condition of all nesting females (sRD) decreased during the nesting season, but that females associated with neritic habitats had a higher physiological condition than females associated with oceanic habitats. In addition, the amount of time required for a hatchling to right itself was negatively correlated with its physiological condition (sRD) and shaded nests produced hatchlings with lower sRD. Overall, our results showed that nucleic acid concentrations and ratios of RNA to DNA are an important tool as potential biomarkers of recent growth in marine turtles. Hence, as biochemical indices of instantaneous growth are likely temperature-, size- and age-dependent, the utility and validation of these indices on marine turtles stocks deserves further study.

Biochemical Indices and Life Traits of Loggerhead Turtles (Caretta caretta) from Cape Verde Islands

PubMed Central

Vieira, Sara; Martins, Samir; Hawkes, Lucy A.; Marco, Adolfo; Teodósio, M. Alexandra

2014-01-01

The loggerhead turtle (Caretta caretta) is an endangered marine reptile for whom assessing population health requires knowledge of demographic parameters such as individual growth rate. In Cape Verde, as within several populations, adult female loggerhead sea turtles show a size-related behavioral and trophic dichotomy. While smaller females are associated with oceanic habitats, larger females tend to feed in neritic habitats, which is reflected in their physiological condition and in their offspring. The ratio of RNA/DNA provides a measure of cellular protein synthesis capacity, which varies depending on changes in environmental conditions such as temperature and food availability. The purpose of this study was to evaluate the combined use of morphometric data and biochemical indices as predictors of the physiological condition of the females of distinct sizes and hatchlings during their nesting season and how temperature may influence the physiological condition on the offspring. Here we employed biochemical indices based on nucleic acid derived indices (standardized RNA/DNA ratio-sRD, RNA concentration and DNA concentration) in skin tissue as a potential predictor of recent growth rate in nesting females and hatchling loggerhead turtles. Our major findings were that the physiological condition of all nesting females (sRD) decreased during the nesting season, but that females associated with neritic habitats had a higher physiological condition than females associated with oceanic habitats. In addition, the amount of time required for a hatchling to right itself was negatively correlated with its physiological condition (sRD) and shaded nests produced hatchlings with lower sRD. Overall, our results showed that nucleic acid concentrations and ratios of RNA to DNA are an important tool as potential biomarkers of recent growth in marine turtles. Hence, as biochemical indices of instantaneous growth are likely temperature-, size- and age-dependent, the utility and validation of these indices on marine turtles stocks deserves further study. PMID:25390348

KSC-2014-2853

NASA Image and Video Library

2014-06-04

CAPE CANAVERAL, Fla. -- Slow and steady wins the race for this gopher tortoise, ambling along the Launch Pad 39B beach road on NASA's Kennedy Space Center in Florida. Gopher tortoises are dry-land turtles that live in scrub, dry hammock, pine flatwood, coastal grassland and dune habitats. The undeveloped property on Kennedy Space Center is managed by the U.S. Fish and Wildlife Service through the Merritt Island National Wildlife Refuge. Currently, gopher tortoises are protected in some states by federal law under the Endangered Species Act ESA. The refuge provides a habitat for 14 species federally listed as threatened or endangered, including the leatherback, green, Kemps Ridley, loggerhead and Atlantic hawksbill turtles. For information on the refuge, visit http://www.fws.gov/merrittisland/Index.html. For more information on the gopher tortoise, visit http://www.fws.gov/northflorida/GopherTortoise/Gopher_Tortoise_Fact_Sheet.html. Photo credit: NASA/Daniel Casper

KSC-2014-2917

NASA Image and Video Library

2014-06-13

CAPE CANAVERAL, Fla. -- This gopher tortoise almost seems to float above the pavement as it hastens along the road at NASA's Kennedy Space Center in Florida. Gopher tortoises are dry-land turtles that live in scrub, dry hammock, pine flatwood, coastal grassland and dune habitats. The undeveloped property on Kennedy Space Center is managed by the U.S. Fish and Wildlife Service through the Merritt Island National Wildlife Refuge. Currently, gopher tortoises are protected in some states by federal law under the Endangered Species Act ESA. The refuge provides a habitat for 14 species federally listed as threatened or endangered, including the leatherback, green, Kemps Ridley, loggerhead and Atlantic hawksbill turtles. For information on the refuge, visit http://www.fws.gov/merrittisland/Index.html. For more information on the gopher tortoise, visit http://www.fws.gov/northflorida/GopherTortoise/Gopher_Tortoise_Fact_Sheet.html. Photo credit: NASA/Daniel Casper

KSC-2014-2851

NASA Image and Video Library

2014-06-04

CAPE CANAVERAL, Fla. -- Why did the gopher tortoise cross the road? To get to the other side of the Launch Pad 39B beach road on NASA's Kennedy Space Center in Florida, of course. Gopher tortoises are dry-land turtles that live in scrub, dry hammock, pine flatwood, coastal grassland and dune habitats. The undeveloped property on Kennedy Space Center is managed by the U.S. Fish and Wildlife Service through the Merritt Island National Wildlife Refuge. Currently, gopher tortoises are protected in some states by federal law under the Endangered Species Act ESA. The refuge provides a habitat for 14 species federally listed as threatened or endangered, including the leatherback, green, Kemps Ridley, loggerhead and Atlantic hawksbill turtles. For information on the refuge, visit http://www.fws.gov/merrittisland/Index.html. For more information on the gopher tortoise, visit http://www.fws.gov/northflorida/GopherTortoise/Gopher_Tortoise_Fact_Sheet.html. Photo credit: NASA/Daniel Casper

Population size of island loggerhead shrikes on Santa Rosa and Santa Cruz Islands

USGS Publications Warehouse

Stanley, Thomas R.; Teel, Susan; Hall, Linnea S.; Dye, Linda C.; Laughrin, Lyndal L.

2012-01-01

Island loggerhead shrikes (Lanius ludovicianus anthonyi) are an endemic, genetically distinct subspecies of loggerhead shrike on California's Santa Rosa, Santa Cruz, and Santa Catalina Islands (USA). This subspecies is listed as a Species of Special Concern by the California Department of Fish and Game and has been petitioned for federal listing under the Endangered Species Act. The combination of suspected low numbers and the possibility of federal listing, prompted us to undertake a study to rigorously estimate the number of remaining individuals on Santa Rosa and Santa Cruz Islands. During the 2009 and 2010 breeding seasons, we surveyed sample units on Santa Rosa and Santa Cruz Islands using a double-observer method with independent observers to estimate joint detection probabilities (p), where we selected units under a stratified random sampling design. We estimated shrike abundance to be 169 in 2009 (p = 0.476) and 240 in 2010 (p = 0.825) for Santa Rosa Island, and 35 in 2009 (p = 0.816) and 42 in 2010 (p = 0.710) for Santa Cruz Island. These numbers, especially for Santa Rosa Island, are higher than previously reported but nevertheless are still low. Rapid vegetation change on both islands due to recent removal of nonnative herbivores may threaten the habitat and status of this subspecies and, therefore, we suggest that intensive demographic and habitat use research be initiated immediately to obtain additional information vital for the management of this subspecies. Published 2012. This article is a U.S. Government work and is in the public domain in the USA.

77 FR 73219 - Endangered and Threatened Wildlife and Plants: Proposed Listing Determinations for 82 Reef...

Federal Register 2010, 2011, 2012, 2013, 2014

2012-12-07

...We, NMFS, have completed comprehensive status reviews under the Endangered Species Act (ESA) of 82 reef-building coral species in response to a petition submitted by the Center for Biological Diversity (CBD) to list the species as either threatened or endangered. We have determined, based on the best scientific and commercial data available and efforts being made to protect the species, that 12 of the petitioned coral species warrant listing as endangered (five Caribbean and seven Indo-Pacific), 54 coral species warrant listing as threatened (two Caribbean and 52 Indo-Pacific), and 16 coral species (all Indo- Pacific) do not warrant listing as threatened or endangered under the ESA. Additionally, we have determined, based on the best scientific and commercial information available and efforts undertaken to protect the species, two Caribbean coral species currently listed warrant reclassification from threatened to endangered. We are announcing that 18 public hearings will be held during the public comment period to provide additional opportunities and formats to receive public input. See SUPPLEMENTARY INFORMATION for public hearing dates, times, and locations.

Sea-level rise: Destruction of threatened and endangered species habitat in South Carolina

NASA Astrophysics Data System (ADS)

Daniels, Richard C.; White, Tammy W.; Chapman, Kimberly K.

1993-05-01

Concern for the environment has increased over the past century, and the US Congress has responded to this concern by passing legislation designed to protect the nation’s ecological biodiversity. This legislation, culminating with the Endangered Species Act of 1973, has been instrumental in defining methods for identifying and protecting endangered or threatened species and their habitats. Current legislation, however, assumes that the range of a protected species will stay constant over time. This assumption may no longer be valid, as the unprecedented increase in the number and concentration of greenhouse gases in the atmosphere has the potential to cause a global warming of 1.0-4.5°C and a sea-level rise (SLR) of 31-150 cm by the year 2100. Changes in climate of this magnitude are capable of causing shifts in the population structure and range of most animal species. This article examines the effects that SLR may have on the habitats of endangered and threatened species at three scales. At the regional scale 52 endangered or threatened plant and animal species were found to reside within 3 m of mean sea level in the coastal stages of the US Southeast. At the state level, the habitats of nine endangered or threatened animals that may be at risk from future SLR were identified. At the local level, a microscale analysis was conducted in the Cape Romain National Wildlife Refuge, South Carolina, USA, on the adverse effects that SLR may have on the habitats of the American alligator, brown pelican, loggerhead sea turtle, and wood stork.

77 FR 2753 - Endangered and Threatened Wildlife and Plants; Recovery Plan for Hawaiian Waterbirds, Second...

Federal Register 2010, 2011, 2012, 2013, 2014

2012-01-19

... and delisting of the species and their removal from the Federal List of Endangered and Threatened... Hawaiian Waterbirds, Second Revision. The recovery plan addresses four endangered bird species. This plan.../endangered/species/recovery-plans.html and http://www.fws.gov/pacific/ecoservices/endangered/recovery/plans...

KSC-99wl13

NASA Image and Video Library

1999-01-08

KENNEDY SPACE CENTER, FLA. -- Its newly grown, wispy feathers reflecting light like a halo, an unidentified baby bird waits, probably for its next meal, in its stick-assembled nest. The nest is in the Merritt Island National Wildlife Refuge, which shares a boundary with KSC. Hardwood hammocks and pine flatwoods share the 92,000-acre refuge with fresh-water impoundments, salt-water estuaries and brackish marshes. The diverse landscape provides habitat for more than 310 species of birds, 25 mammals, 117 fishes, and 65 amphibians and reptiles, including such endangered species as Southern bald eagles, wood storks, Florida scrub jays, Atlantic loggerhead and leatherback turtles, osprey, and nearly 5,000 alligators

Effects of endocrine disrupting chemicals on estrogen receptor alpha and heat shock protein 60 gene expression in primary cultures of loggerhead sea turtle (Caretta caretta) erythrocytes.

PubMed

Cocci, Paolo; Capriotti, Martina; Mosconi, Gilberto; Palermo, Francesco Alessandro

2017-10-01

The loggerhead turtle (Caretta caretta) can be considered a good indicator species for studying the ecological impact of endocrine disrupting chemicals (EDCs) on wildlife. However, the effect of these environmental pollutants on nuclear steroid hormone signaling has not yet been addressed in sea turtles mainly due to the legal constraints of their endangered status. Here we describe the use of primary erythrocyte cell cultures as in vitro models for evaluating the effects of different EDCs on the expression of estrogen receptor α (ERα). In addition, we evaluated erythrocyte toxicity caused by EDCs using Alamar Blue assay and heat shock proteins 60 (HSP60) expression. Primary cultures of erythrocytes were exposed to increasing concentrations of 4-nonylphenol (4NP), Diisodecyl phthalate (DiDP), Tri-m-cresyl phosphate (TMCP) and Tributyltin (TBT) for 48h. Alamar Blue demonstrated that exposure of erythrocytes to each contaminant for up to 48h led to a significant impairment of cellular metabolic activity at 100μM, with the exception of TBT. Moreover, our data indicate that loggerhead erythrocytes constitutively express ERα and HSP60 at the transcript level and respond to EDCs by up-regulating their expression. In this regard, ERα was up-regulated in a dose-dependent manner after 48h exposure to both 4NP and TMCP. Interestingly, the dosage-dependent effects of DiDP on ERα expression were opposite in comparison to that obtained following exposure to the other tested compounds. This work provides the first indication regarding the potential of primary erythrocytes as study models for evaluating the effects of EDCs on sea turtles. Copyright © 2017 Elsevier Inc. All rights reserved.

The Endangered Species Act: The Law of Last Resort.

ERIC Educational Resources Information Center

Clearing, 1991

1991-01-01

Discussed is the possibility that the salmon found in the Columbia River (Idaho) is an endangered species. A list of threatened or endangered animal species in the Pacific Northwest is included. Activities that deal with the topics of diversity, endangered species, and what is being done about them are provided. (KR)

First Language First: Community-Based Literacy Programmes for Minority Language Contexts in Asia (Kunming, China, May 17-22, 2004)

ERIC Educational Resources Information Center

Online Submission, 2005

2005-01-01

There are at least 6,000--7,000 languages spoken in the world today, with over half of them endangered. And 61 percent of the endangered languages are within the Asia and Pacific Region. The publication is a report derived from the Regional (Asia and Pacific Region) Workshop on Mother Tongue/Bilingual Literacy Programs for Ethnic Minorities, held…

Persistent organic pollutants in fat of three species of Pacific pelagic longline caught sea turtles: Accumulation in relation to ingested plastic marine debris

USGS Publications Warehouse

Clukey, Katharine; Lepczyk, Christopher A.; Balazs, George H.; Work, Thierry M.; Li, Qing X.; Bachman, Melanie J.; Lynch, Jennifer M.

2017-01-01

In addition to eating contaminated prey, sea turtles may be exposed to persistent organic pollutants (POPs) from ingesting plastic debris that has absorbed these chemicals. Given the limited knowledge about POPs in pelagic sea turtles and how plastic ingestion influences POP exposure, our objectives were to: 1) provide baseline contaminant levels of three species of pelagic Pacific sea turtles; and 2) assess trends of contaminant levels in relation to species, sex, length, body condition and capture location. In addition, we hypothesized that if ingesting plastic is a significant source of POP exposure, then the amount of ingested plastic may be correlated to POP concentrations accumulated in fat. To address our objectives we compared POP concentrations in fat samples to previously described amounts of ingested plastic from the same turtles. Fat samples from 25 Pacific pelagic sea turtles [2 loggerhead (Caretta caretta), 6 green (Chelonia mydas) and 17 olive ridley (Lepidochelys olivacea) turtles] were analyzed for 81 polychlorinated biphenyls (PCBs), 20 organochlorine pesticides, and 35 brominated flame-retardants. The olive ridley and loggerhead turtles had higher ΣDDTs (dichlorodiphenyltrichloroethane and metabolites) than ΣPCBs, at a ratio similar to biota measured in the South China Sea and southern California. Green turtles had a ratio close to 1:1. These pelagic turtles had lower POP levels than previously reported in nearshore turtles. POP concentrations were unrelated to the amounts of ingested plastic in olive ridleys, suggesting that their exposure to POPs is mainly through prey. In green turtles, concentrations of ΣPCBs were positively correlated with the number of plastic pieces ingested, but these findings were confounded by covariance with body condition index (BCI). Green turtles with a higher BCI had eaten more plastic and also had higher POPs. Taken together, our findings suggest that sea turtles accumulate most POPs through their prey rather than marine debris.

Hawksbill × loggerhead sea turtle hybrids at Bahia, Brazil: where do their offspring go?

PubMed Central

Reisser, Julia; Marins, Luis F.; Marcovaldi, Maria A.; Soares, Luciano S.; Monteiro, Danielle S.; Wijeratne, Sarath; Pattiaratchi, Charitha; Secchi, Eduardo R.

2014-01-01

Hybridization between hawksbill (Eretmochelys imbricata) and loggerhead (Caretta caretta) breeding groups is unusually common in Bahia state, Brazil. Such hybridization is possible because hawksbill and loggerhead nesting activities overlap temporally and spatially along the coast of this state. Nevertheless, the destinations of their offspring are not yet known. This study is the first to identify immature hawksbill × loggerhead hybrids (n = 4) from this rookery by analyzing the mitochondrial DNA (mtDNA) of 157 immature turtles morphologically identified as hawksbills. We also compare for the first time modeled dispersal patterns of hawksbill, loggerhead, and hybrid offspring considering hatching season and oceanic phase duration of turtles. Particle movements varied according to season, with a higher proportion of particles dispersing southwards throughout loggerhead and hybrid hatching seasons, and northwards during hawksbill season. Hybrids from Bahia were not present in important hawksbill feeding grounds of Brazil, being detected only at areas more common for loggerheads. The genetic and oceanographic findings of this work indicate that these immature hybrids, which are morphologically similar to hawksbills, could be adopting behavioral traits typical of loggerheads, such as feeding in temperate waters of the western South Atlantic. Understanding the distribution, ecology, and migrations of these hybrids is essential for the development of adequate conservation and management plans. PMID:24688839

Hawksbill × loggerhead sea turtle hybrids at Bahia, Brazil: where do their offspring go?

PubMed

Proietti, Maira C; Reisser, Julia; Marins, Luis F; Marcovaldi, Maria A; Soares, Luciano S; Monteiro, Danielle S; Wijeratne, Sarath; Pattiaratchi, Charitha; Secchi, Eduardo R

2014-01-01

Hybridization between hawksbill (Eretmochelys imbricata) and loggerhead (Caretta caretta) breeding groups is unusually common in Bahia state, Brazil. Such hybridization is possible because hawksbill and loggerhead nesting activities overlap temporally and spatially along the coast of this state. Nevertheless, the destinations of their offspring are not yet known. This study is the first to identify immature hawksbill × loggerhead hybrids (n = 4) from this rookery by analyzing the mitochondrial DNA (mtDNA) of 157 immature turtles morphologically identified as hawksbills. We also compare for the first time modeled dispersal patterns of hawksbill, loggerhead, and hybrid offspring considering hatching season and oceanic phase duration of turtles. Particle movements varied according to season, with a higher proportion of particles dispersing southwards throughout loggerhead and hybrid hatching seasons, and northwards during hawksbill season. Hybrids from Bahia were not present in important hawksbill feeding grounds of Brazil, being detected only at areas more common for loggerheads. The genetic and oceanographic findings of this work indicate that these immature hybrids, which are morphologically similar to hawksbills, could be adopting behavioral traits typical of loggerheads, such as feeding in temperate waters of the western South Atlantic. Understanding the distribution, ecology, and migrations of these hybrids is essential for the development of adequate conservation and management plans.

Historical versus Contemporary Climate Forcing on the Annual Nesting Variability of Loggerhead Sea Turtles in the Northwest Atlantic Ocean

PubMed Central

Arendt, Michael D.; Schwenter, Jeffrey A.; Witherington, Blair E.; Meylan, Anne B.; Saba, Vincent S.

2013-01-01

A recent analysis suggested that historical climate forcing on the oceanic habitat of neonate sea turtles explained two-thirds of interannual variability in contemporary loggerhead (Caretta caretta) sea turtle nest counts in Florida, where nearly 90% of all nesting by this species in the Northwest Atlantic Ocean occurs. Here, we show that associations between annual nest counts and climate conditions decades prior to nest counts and those conditions one year prior to nest counts were not significantly different. Examination of annual nest count and climate data revealed that statistical artifacts influenced the reported 31-year lag association with nest counts. The projected importance of age 31 neophytes to annual nest counts between 2020 and 2043 was modeled using observed nest counts between 1989 and 2012. Assuming consistent survival rates among cohorts for a 5% population growth trajectory and that one third of the mature female population nests annually, the 41% decline in annual nest counts observed during 1998–2007 was not projected for 2029–2038. This finding suggests that annual nest count trends are more influenced by remigrants than neophytes. Projections under the 5% population growth scenario also suggest that the Peninsular Recovery Unit could attain the demographic recovery criteria of 106,100 annual nests by 2027 if nest counts in 2019 are at least comparable to 2012. Because the first year of life represents only 4% of the time elapsed through age 31, cumulative survival at sea across decades explains most cohort variability, and thus, remigrant population size. Pursuant to the U.S. Endangered Species Act, staggered implementation of protection measures for all loggerhead life stages has taken place since the 1970s. We suggest that the 1998–2007 nesting decline represented a lagged perturbation response to historical anthropogenic impacts, and that subsequent nest count increases since 2008 reflect a potential recovery response. PMID:24339901

Historical versus contemporary climate forcing on the annual nesting variability of loggerhead sea turtles in the Northwest Atlantic Ocean.

PubMed

Arendt, Michael D; Schwenter, Jeffrey A; Witherington, Blair E; Meylan, Anne B; Saba, Vincent S

2013-01-01

A recent analysis suggested that historical climate forcing on the oceanic habitat of neonate sea turtles explained two-thirds of interannual variability in contemporary loggerhead (Caretta caretta) sea turtle nest counts in Florida, where nearly 90% of all nesting by this species in the Northwest Atlantic Ocean occurs. Here, we show that associations between annual nest counts and climate conditions decades prior to nest counts and those conditions one year prior to nest counts were not significantly different. Examination of annual nest count and climate data revealed that statistical artifacts influenced the reported 31-year lag association with nest counts. The projected importance of age 31 neophytes to annual nest counts between 2020 and 2043 was modeled using observed nest counts between 1989 and 2012. Assuming consistent survival rates among cohorts for a 5% population growth trajectory and that one third of the mature female population nests annually, the 41% decline in annual nest counts observed during 1998-2007 was not projected for 2029-2038. This finding suggests that annual nest count trends are more influenced by remigrants than neophytes. Projections under the 5% population growth scenario also suggest that the Peninsular Recovery Unit could attain the demographic recovery criteria of 106,100 annual nests by 2027 if nest counts in 2019 are at least comparable to 2012. Because the first year of life represents only 4% of the time elapsed through age 31, cumulative survival at sea across decades explains most cohort variability, and thus, remigrant population size. Pursuant to the U.S. Endangered Species Act, staggered implementation of protection measures for all loggerhead life stages has taken place since the 1970s. We suggest that the 1998-2007 nesting decline represented a lagged perturbation response to historical anthropogenic impacts, and that subsequent nest count increases since 2008 reflect a potential recovery response.

Juvenile recruitment in loggerhead sea turtles linked to decadal changes in ocean circulation.

PubMed

Ascani, François; Van Houtan, Kyle S; Di Lorenzo, Emanuele; Polovina, Jeffrey J; Jones, T Todd

2016-11-01

Given the threats of climate change, understanding the relationship of climate with long-term population dynamics is critical for wildlife conservation. Previous studies have linked decadal climate oscillations to indices of juvenile recruitment in loggerhead sea turtles (Caretta caretta), but without a clear understanding of mechanisms. Here, we explore the underlying processes that may explain these relationships. Using the eddy-resolving Ocean General Circulation Model for the Earth Simulator, we generate hatch-year trajectories for loggerhead turtles emanating from Japan over six decades (1950-2010). We find that the proximity of the high-velocity Kuroshio Current to the primary nesting areas in southern Japan is remarkably stable and that hatchling dispersal to oceanic habitats itself does not vary on decadal timescales. However, we observe a shift in latitudes of trajectories, consistent with the Pacific Decadal Oscillation (PDO). In a negative PDO phase, the Kuroshio Extension Current (KEC) is strong and acts as a physical barrier to the northward transport of neonates. As a result, hatch-year trajectories remain mostly below 35°N in the warm, unproductive region south of the Transition Zone Chlorophyll Front (TZCF). During a positive PDO phase, however, the KEC weakens facilitating the neonates to swim north of the TZCF into cooler and more productive waters. As a result, annual cohorts from negative PDO years may face a lack of resources, whereas cohorts from positive PDO years may find sufficient resources during their pivotal first year. These model outputs indicate that the ocean circulation dynamics, combined with navigational swimming behavior, may be a key factor in the observed decadal variability of sea turtle populations. © 2016 John Wiley & Sons Ltd.

77 FR 36727 - Endangered and Threatened Wildlife and Plants; Revised Designation of Critical Habitat for the...

Federal Register 2010, 2011, 2012, 2013, 2014

2012-06-19

...We, the U.S. Fish and Wildlife Service (Service), designate revised critical habitat for the Pacific Coast distinct population segment (DPS) (Pacific Coast WSP) of the western snowy plover (Charadrius nivosus nivosus, formerly C. alexandrinus nivosus) under the Endangered Species Act of 1973, as amended (Act). In total, approximately 24,527 acres (9,926 hectares) of critical habitat for the Pacific Coast WSP in Washington, Oregon, and California, fall within the boundaries of the critical habitat designation. This revised final designation constitutes an increase of approximately 12,377 ac (5,009 ha) from the 2005 designation of critical habitat for the Pacific Coast WSP. A taxonomic name change has occurred and been accepted for the snowy plover. Throughout the remainder of this document, we will use the currently recognized name for the subspecies, Charadrius nivosus nivosus, to which the listed entity (Pacific Coast WSP) belongs for references to the Pacific Coast WSP.

CONSPECIFIC ATTRACTION IN LOGGERHEAD SHRIKES: IMPLICATIONS FOR HABITAT CONSERVATION AND REINTRODUCTION

EPA Science Inventory

The loggerhead shrike, Lanius ludovicianus, is a declining songbird that forms breeding aggregations. Despite such reports from several populations, only one statistical analysis of loggerhead shrike territory distribution has been published to date. I use a spatio-temporal sim...

75 FR 23671 - Endangered and Threatened Species; Take of Anadromous Fish; Research Permit Applications

Federal Register 2010, 2011, 2012, 2013, 2014

2010-05-04

... requests relating to Pacific salmon. The proposed research is intended to increase knowledge of species listed under the Endangered Species Act (ESA) and to help guide management and conservation efforts. The...

LOGGERHEAD SEA TURTLE LATE NESTING ECOLOGY IN VIRGINIA BEACH, VIRGINIA

EPA Science Inventory

T'he.loggerhead sea turtle (Caretta came is the only recurrent nesting species of sea turtle in southeastern Virginia (Lutcavage & Musick, 1985; Dodd, 1988). Inasmuch as the loggerhead is a federally threatened species, the opportunity to gather data on its nesting ecology is imp...

Conservation biology for suites of species: Demographic modeling for Pacific island kingfishers

USGS Publications Warehouse

Kesler, D.C.; Haig, S.M.

2007-01-01

Conservation practitioners frequently extrapolate data from single-species investigations when managing critically endangered populations. However, few researchers initiate work with the intent of making findings useful to conservation efforts for other species. We presented and explored the concept of conducting conservation-oriented research for suites of geographically separated populations with similar natural histories, resource needs, and extinction threats. An example was provided in the form of an investigation into the population demography of endangered Micronesian kingfishers (Todiramphus cinnamominus). We provided the first demographic parameter estimates for any of the 12 endangered Pacific Todiramphus species, and used results to develop a population projection matrix model for management throughout the insular Pacific. Further, we used the model for elasticity and simulation analyses with demographic values that randomly varied across ranges that might characterize congener populations. Results from elasticity and simulation analyses indicated that changes in breeding adult survival exerted the greatest magnitude of influence on population dynamics. However, changes in nestling survival were more consistently correlated with population dynamics as demographic rates were randomly altered. We concluded that conservation practitioners working with endangered Pacific kingfishers should primarily focus efforts on factors affecting nestling and breeder survival, and secondarily address fledgling juveniles and helpers. Further, we described how the generalized base model might be changed to focus on individual populations and discussed the potential application of multi-species models to other conservation situations. ?? 2007 Elsevier Ltd. All rights reserved.

75 FR 2158 - Palmyra Atoll National Wildlife Refuge, U.S. Pacific Island Territory

Federal Register 2010, 2011, 2012, 2013, 2014

2010-01-14

... migratory birds, coral reefs, and threatened and endangered species in their natural setting. Palmyra Atoll..., (808) 792-9586. U.S. Mail: Beth Flint, Acting Project Leader, Pacific Reefs National Wildlife Refuge..., Pacific Reefs National Wildlife Refuge Complex, phone (808) 792-9553. SUPPLEMENTARY INFORMATION: Refuge...

Endangered Species Case – Northwest Center for Alternatives to Pesticides v. EPA

EPA Pesticide Factsheets

EPA is reinstating streamside no-spray buffer zones to protect endangered or threatened Pacific salmon and steelhead in California, Oregon and Washington State, which were originally established in prior litigation brought against EPA by WTC and others.

KSC-99pc66

NASA Image and Video Library

1999-01-14

KENNEDY SPACE CENTER, FLA. -- A robin perches on a branch in the Merritt Island National Wildlife Refuge, which shares a boundary with the space center. Robins range throughout North America, from Alaska to Florida. Although considered a harbinger of spring, they do winter in northern states, frequenting cedar bogs and swamps. They also winter in Florida, where they often can be seen in flocks of hundreds near KSC and the wildlife refuge, which comprises 92,000 acres, ranging from hardwood hammocks and pine flatwoods to fresh-water impoundments, salt-water estuaries and brackish marshes. The diverse landscape provides habitat for more than 310 species of birds, 25 mammals, 117 fishes, and 65 amphibians and reptiles, including such endangered species as Southern bald eagles, wood storks, Florida scrub jays, Atlantic loggerhead and leatherback turtles, osprey, and nearly 5,000 alligators

SALMON AND THE ENDANGERED SPECIES ACT: TROUBLESOME QUESTIONS

EPA Science Inventory

Throughout the Pacific Northwest and California, all wild salmon runs have declined since 1850 and some have disappeared. A sustainable future for wild salmon remains elusive. In response to requirements of the U.S. Endangered Species Act, the Canadian Species at Risk Act, and ...

78 FR 14078 - Endangered Species; File No. 17405

Federal Register 2010, 2011, 2012, 2013, 2014

2013-03-04

... David Lapota, Ph.D., Department of the Navy, SPAWAR Systems Center, Pacific, Environmental Sciences... take black abalone (Haliotis cracherodii) for purposes of scientific research. DATES: Written... endangered and threatened species (50 CFR 222-226). The purpose of the proposed research is to overcome key...

78 FR 50396 - Endangered Species; File No. 17405

Federal Register 2010, 2011, 2012, 2013, 2014

2013-08-19

... Lapota, Ph.D., Department of the Navy, SPAWAR Systems Center, Pacific, Environmental Sciences Division... cracherodii) for purposes of scientific research. ADDRESSES: The permit and related documents are available... to the disadvantage of such endangered or threatened species, and (3) is consistent with the purposes...

Interannual differences for sea turtles bycatch in Spanish longliners from Western Mediterranean Sea.

PubMed

Báez, José C; Macías, David; García-Barcelona, Salvador; Real, Raimundo

2014-01-01

Recent studies showed that regional abundance of loggerhead and leatherback turtles could oscillate interannually according to oceanographic and climatic conditions. The Western Mediterranean is an important fishing area for the Spanish drifting longline fleet, which mainly targets swordfish, bluefin tuna, and albacore. Due to the spatial overlapping in fishing activity and turtle distribution, there is an increasing sea turtle conservation concern. The main goal of this study is to analyse the interannual bycatch of loggerhead and leatherback turtles by the Spanish Mediterranean longline fishery and to test the relationship between the total turtle by-catch of this fishery and the North Atlantic Oscillation (NAO). During the 14 years covered in this study, the number of sea turtle bycatches was 3,940 loggerhead turtles and 8 leatherback turtles, 0.499 loggerhead turtles/1000 hooks and 0.001014 leatherback turtles/1000 hooks. In the case of the loggerhead turtle the positive phase of the NAO favours an increase of loggerhead turtles in the Western Mediterranean Sea. However, in the case of leatherback turtle the negative phase of the NAO favours the presence of leatherback turtle. This contraposition could be related to the different ecophysiological response of both species during their migration cycle.

Interannual Differences for Sea Turtles Bycatch in Spanish Longliners from Western Mediterranean Sea

PubMed Central

Báez, José C.; García-Barcelona, Salvador

2014-01-01

Recent studies showed that regional abundance of loggerhead and leatherback turtles could oscillate interannually according to oceanographic and climatic conditions. The Western Mediterranean is an important fishing area for the Spanish drifting longline fleet, which mainly targets swordfish, bluefin tuna, and albacore. Due to the spatial overlapping in fishing activity and turtle distribution, there is an increasing sea turtle conservation concern. The main goal of this study is to analyse the interannual bycatch of loggerhead and leatherback turtles by the Spanish Mediterranean longline fishery and to test the relationship between the total turtle by-catch of this fishery and the North Atlantic Oscillation (NAO). During the 14 years covered in this study, the number of sea turtle bycatches was 3,940 loggerhead turtles and 8 leatherback turtles, 0.499 loggerhead turtles/1000 hooks and 0.001014 leatherback turtles/1000 hooks. In the case of the loggerhead turtle the positive phase of the NAO favours an increase of loggerhead turtles in the Western Mediterranean Sea. However, in the case of leatherback turtle the negative phase of the NAO favours the presence of leatherback turtle. This contraposition could be related to the different ecophysiological response of both species during their migration cycle. PMID:24764769

78 FR 16255 - Endangered Species; File No. 17022

Federal Register 2010, 2011, 2012, 2013, 2014

2013-03-14

... Pacific Islands Fisheries Science Center (PIFSC; Samuel Pooley, Ph.D., Responsible Party), has been issued... purposes of scientific research. ADDRESSES: The permit and related documents are available for review upon... such endangered or threatened species, and (3) is consistent with the purposes and policies set forth...

Managing conflicts between economic activities and threatened migratory marine species toward creating a multiobjective blue economy.

PubMed

Harris, Linda R; Nel, Ronel; Oosthuizen, Herman; Meÿer, Mike; Kotze, Deon; Anders, Darrell; McCue, Steven; Bachoo, Santosh

2018-04-01

Harnessing the economic potential of the oceans is key to combating poverty, enhancing food security, and strengthening economies. But the concomitant risk of intensified resource extraction to migratory species is worrying given these species contribute to important ecological processes, often underpin alternative livelihoods, and are mostly already threatened. We thus sought to quantify the potential conflict between key economic activities (5 fisheries and hydrocarbon exploitation) and sea turtle migration corridors in a region with rapid economic development: southern and eastern Africa. We satellite tracked the movement of 20 loggerhead (Caretta caretta) and 14 leatherback (Dermochelys coriacea) turtles during their postnesting migrations. We used movement-based kernel density estimation to identify migration corridors for each species. We overlaid these corridors on maps of the distribution and intensity of economic activities, quantified the extent of overlap and threat posed by each activity on each species, and compared the effects of activities. These results were compared with annual bycatch rates in the respective fisheries. Both species' 3 corridors overlapped most with longline fishing, but the effect was worse for leatherbacks: their bycatch rates of approximately 1500/year were substantial relative to the regional population size of <100 nesting females/annum. This bycatch rate is likely slowing population growth. Artisanal fisheries may be of greater concern for loggerheads than for leatherbacks, but the population appears to be withstanding the high bycatch rates because it is increasing exponentially. The hydrocarbon industry currently has a moderately low impact on both species, but mining in key areas (e.g., Southern Mozambique) may undermine >50 years of conservation, potentially affecting >80% of loggerheads, 33% of the (critically endangered) leatherbacks, and their nesting beaches. We support establishing blue economies (i.e., generating wealth from the ocean), but oceans need to be carefully zoned and responsibly managed in both space and time to achieve economic (resource extraction), ecological (conservation, maintenance of processes), and social (maintenance of alternative livelihood opportunities, alleviate poverty) objectives. © 2017 Society for Conservation Biology.

DETECTING PERSISTENT CHANGE IN THE HABITAT OF SALMON-BEARING STREAMS IN THE PACIFIC NORTHWEST

EPA Science Inventory

In the northwestern United States, there is considerable interest in the recovery of salmon populations listed as threatened or endangered under the Endangered Species Act. A critical component of any salmon recovery effort is the improvement of stream habitat that supports vario...

Conservation and Management for Fish-eating Birds and Endangered Salmon

Treesearch

D. D. Roby; K. Collis; D. E. Lyons

2005-01-01

A conflict involving piscivorous birds and salmonids in the Pacific Northwest pits the conservation of protected migratory waterbirds against the restoration of Columbia Basin salmonids (Oncorhynchus spp.) that are listed under the U.S. Endangered Species Act. The Columbia River Avian Predation Project is a cooperative, collaborative research project...

Heavy metal distribution in blood, liver and kidneys of Loggerhead (Caretta caretta) and Green (Chelonia mydas) sea turtles from the Northeast Mediterranean Sea.

PubMed

Yipel, Mustafa; Tekeli, İbrahim Ozan; İşler, Cafer Tayer; Altuğ, Muhammed Enes

2017-12-15

The aim of the present study was to determine the concentrations of the most investigated environmentally relevant heavy metals in two highly endangered sea turtle species (Caretta caretta and Chelonia mydas) from the important nesting area on the Northeast Mediterranean Sea. The highest mean concentration was of Fe, while Hg and Pb were lowest. All tissue concentrations of Al, As, Fe and Mn were significantly different between the species. In particular, As, Cd, Cu, Mn, Ni, Se, Zn concentrations were lower in Caretta caretta and Cd, Hg, Mn, Zn concentrations were lower in Chelonia mydas than those reported in other parts of the world. Compared to studies conductud in other parts of the Mediterranean, Cd was lower. Copyright © 2017 Elsevier Ltd. All rights reserved.

Ingestion of marine litter by loggerhead sea turtles, Caretta caretta, in Portuguese continental waters.

PubMed

Nicolau, Lídia; Marçalo, Ana; Ferreira, Marisa; Sá, Sara; Vingada, José; Eira, Catarina

2016-02-15

The accumulation of litter in marine and coastal environments is a major threat to marine life. Data on marine litter in the gastrointestinal tract of stranded loggerhead turtles, Caretta caretta, found along the Portuguese continental coast was presented. Out of the 95 analysed loggerheads, litter was present in 56 individuals (59.0%) and most had less than 10 litter items (76.8%) and less than 5 g (dm) (96.8%). Plastic was the main litter category (frequency of occurrence=56.8%), while sheet (45.3%) was the most relevant plastic sub-category. There was no influence of loggerhead stranding season, cause of stranding or size on the amount of litter ingested (mean number and dry mass of litter items per turtle). The high ingested litter occurrence frequency in this study supports the use of the loggerhead turtle as a suitable tool to monitor marine litter trends, as required by the European Marine Strategy Framework Directive. Copyright © 2015 Elsevier Ltd. All rights reserved.

Life History and Environmental Requirements of Loggerhead Turtles

DTIC Science & Technology

1988-08-01

NOMENCLATURE/TAXONOMY/RANGE Scientific name ........ .................... Caretta caretta Preferred common name ........ ................. Loggerhead...Green 51-105 113-140 Broad, oval Olive , dark- White- Small round 15(90)’ (100)a brown mottled yellowish Loggerhead 79-125 77-140 Heart-shaped Reddish...Cream- Very large 25 (110)8 (105)8 brown yellow triangular Kemp’s ridey 59-73 36-45 Circular Olive -green Yellow Medium 13 (70)a (42)’ pointed

Environmental Impact Research Program. Life History and Environmental Requirements of Loggerhead Sea Turtles.

DTIC Science & Technology

1986-01-01

green turtles dig a deep body pit when nesting. LIFE HISTORY - 5. The greatest...were loggerheads, but greens and Kemp’s ridleys were also found . (Joyce 1982). Since the turtles were discovered during the winter, were covered...Preferences in the Loggerhead Sea Turtle , Caretta caretta," Copeia, Vol 1982, No. 4, pp 965-969. Hendrickson, J. R. 1958. " The Green Sea Turtle

Case descriptions of fibropapillomatosis in rehabilitating loggerhead sea turtles Caretta caretta in the southeastern USA.

PubMed

Page-Karjian, Annie; Norton, Terry M; Harms, Craig; Mader, Doug; Herbst, Larry H; Stedman, Nancy; Gottdenker, Nicole L

2015-08-20

Fibropapillomatosis (FP) is a debilitating neoplastic disease that affects all species of hard-shelled sea turtles, including loggerhead turtles Caretta caretta. FP can represent an important clinical concern in rehabilitating turtles, since managing these infectious lesions often requires special husbandry provisions including quarantine, and FP may affect clinical progression, extend rehabilitation duration, and complicate prognoses. Here we describe cases of rehabilitating loggerhead turtles with FP (designated FP+). Medical records of FP+ loggerhead cases from 3 sea turtle rehabilitation facilities in the southeastern USA were reviewed. Between 2001 and 2014, FP was observed in 8 of 818 rehabilitating loggerhead turtles (0.98% overall prevalence in admitted patients). FP+ loggerhead size classes represented were large juvenile (straight carapace length, SCL: 58.1-80 cm; n=7) and adult (SCL>87 cm; n=1). Three turtles presented with FP, and 5 developed tumors during rehabilitation within a range of 45 to 319 d. Sites of new tumor growth included the eyes, sites of trauma, neck, and glottis. FP+ turtles were scored as mildly (3/8), moderately (4/8), or heavily (1/8) afflicted. The mean total time in rehabilitation was 476±355 d (SD) (range: 52-1159 d). Six turtles were released without visible evidence of FP, 1 turtle was released with mild FP, and 1 turtle with internal FP was euthanized. Clinical decision-making for FP+ loggerhead patients can be aided by such information as time to tumor development, anatomic locations to monitor for new tumor growth, husbandry considerations, diagnostic and treatment options, and comparisons to FP in rehabilitating green turtles Chelonia mydas.

Investigation of plastic debris ingestion by four species of sea turtles collected as bycatch in pelagic Pacific longline fisheries

USGS Publications Warehouse

Clukey, Katherine E.; Lepczyk, Christopher A.; Balazs, George H.; Work, Thierry M.; Lynch, Jennifer M.

2017-01-01

Ingestion of marine debris is an established threat to sea turtles. The amount, type, color and location of ingested plastics in the gastrointestinal tracts of 55 sea turtles from Pacific longline fisheries from 2012 to 2016 were quantified, and compared across species, turtle length, body condition, sex, capture location, season and year. Six approaches for quantifying amounts of ingested plastic strongly correlated with one another and included: number of pieces, mass, volume and surface area of plastics, ratio of plastic mass to body mass, and percentage of the mass of gut contents consisting of plastic. All olive ridley (n = 37), 90% of green (n = 10), 80% of loggerhead (n = 5) and 0% of leatherback (n = 3) turtles had ingested plastic; green turtles ingested significantly more than olive ridleys. Most debris was in the large intestines. No adverse health impacts (intestinal lesions, blockage, or poor body condition) due directly to plastic ingestion were noted.

Investigation of plastic debris ingestion by four species of sea turtles collected as bycatch in pelagic Pacific longline fisheries.

PubMed

Clukey, Katharine E; Lepczyk, Christopher A; Balazs, George H; Work, Thierry M; Lynch, Jennifer M

2017-07-15

Ingestion of marine debris is an established threat to sea turtles. The amount, type, color and location of ingested plastics in the gastrointestinal tracts of 55 sea turtles from Pacific longline fisheries from 2012 to 2016 were quantified, and compared across species, turtle length, body condition, sex, capture location, season and year. Six approaches for quantifying amounts of ingested plastic strongly correlated with one another and included: number of pieces, mass, volume and surface area of plastics, ratio of plastic mass to body mass, and percentage of the mass of gut contents consisting of plastic. All olive ridley (n=37), 90% of green (n=10), 80% of loggerhead (n=5) and 0% of leatherback (n=3) turtles had ingested plastic; green turtles ingested significantly more than olive ridleys. Most debris was in the large intestines. No adverse health impacts (intestinal lesions, blockage, or poor body condition) due directly to plastic ingestion were noted. Copyright © 2017. Published by Elsevier Ltd.

KSC-99pc64

NASA Image and Video Library

1999-01-14

KENNEDY SPACE CENTER, FLA. -- A sandpiper wades the water in the Merritt Island National Wildlife Refuge, which shares a boundary with the space center. Sandpipers are usually seen foraging on the beach or margins of lakes, ponds, marshes or streams. The open waters of the Wildlife Refuge provide wintering areas for 23 species of migratory waterfowl as well as a year-round home for great blue herons, great egrets, wood storks, cormorants, brown pelicans and other species of marsh and shore birds. The refuge comprises 92,000 acres, ranging from fresh-water impoundments, salt-water estuaries and brackish marshes to hardwood hammocks and pine flatwoods. The diverse landscape provides habitat for more than 310 species of birds, 25 mammals, 117 fishes, and 65 amphibians and reptiles, including such endangered species as Southern bald eagles, wood storks, Florida scrub jays, Atlantic loggerhead and leatherback turtles, osprey, and nearly 5,000 alligators

A robin perches on a branch at KSC

NASA Technical Reports Server (NTRS)

1999-01-01

A robin perches on a branch in the Merritt Island National Wildlife Refuge, which shares a boundary with the space center. Robins range throughout North America, from Alaska to Florida. Although considered a harbinger of spring, they do winter in northern states, frequenting cedar bogs and swamps. They also winter in Florida, where they often can be seen in flocks of hundreds near KSC and the wildlife refuge, which comprises 92,000 acres, ranging from hardwood hammocks and pine flatwoods to fresh-water impoundments, salt-water estuaries and brackish marshes. The diverse landscape provides habitat for more than 310 species of birds, 25 mammals, 117 fishes, and 65 amphibians and reptiles, including such endangered species as Southern bald eagles, wood storks, Florida scrub jays, Atlantic loggerhead and leatherback turtles, osprey, and nearly 5,000 alligators.

Blood analytes of oceanic-juvenile loggerhead sea turtles (Caretta caretta) from Azorean waters: reference intervals, size-relevant correlations and comparisons to neritic loggerheads from western Atlantic coastal waters.

PubMed

Stacy, Nicole I; Bjorndal, Karen A; Perrault, Justin R; Martins, Helen R; Bolten, Alan B

2018-01-01

Blood analyte reference intervals are scarce for immature life stages of the loggerhead sea turtle ( Caretta caretta ). The objectives of this study were to (1) document reference intervals of packed cell volume (PCV) and 20 plasma chemistry analytes from wild oceanic-juvenile stage loggerhead turtles from Azorean waters, (2) investigate correlations with body size (minimum straight carapace length: SCL min ) and (3) compare plasma chemistry data to those from older, larger neritic juveniles (<80 cm SCL min ) and adult loggerheads (≥80 cm SCL min ) that have recruited to the West Atlantic in waters around Cape Canaveral, Florida. Twenty-eight Azorean loggerhead turtles with SCL min of 17.6-60.0 cm (mean 34.9 ± 12.1 cm) were captured, sampled and immediately released. Reference intervals are reported. There were several biologically relevant correlations of blood analytes with SCL min : positive correlations of PCV, proteins and triglycerides with SCL min indicated somatic growth, increasing diving activity and/or diet; negative correlations of tissue enzymes with SCL min suggested faster growth at smaller turtle size, while negative correlations of electrolytes with SCL min indicated differences in diet, environmental conditions and/or osmoregulation unique to the geographic location. Comparisons of loggerhead turtles from the Azores (i.e. oceanic) and Cape Canaveral (i.e. neritic) identified significant differences regarding diet, somatic growth, and/or environment: in Azorean turtles, albumin, triglycerides and bilirubin increased with SCL min , while alkaline phosphatase, lactate dehydrogenase and sodium decreased. In larger neritic Cape Canaveral turtles, aspartate aminotransferase increased with SCL min , while the albumin:globulin ratio, phosphorus and cholesterol decreased. These differences suggest unique physiological disparities between life stage development and migration, reflecting biological and habitat differences between the two populations. This information presents biologically important data that is applicable to stranded individual turtles and to the population level, a tool for the development of conservation strategies, and a baseline for future temporal and spatial investigations of the Azorean loggerhead sea turtle population.

Blood analytes of oceanic-juvenile loggerhead sea turtles (Caretta caretta) from Azorean waters: reference intervals, size-relevant correlations and comparisons to neritic loggerheads from western Atlantic coastal waters

PubMed Central

Bjorndal, Karen A; Perrault, Justin R; Martins, Helen R; Bolten, Alan B

2018-01-01

Abstract Blood analyte reference intervals are scarce for immature life stages of the loggerhead sea turtle (Caretta caretta). The objectives of this study were to (1) document reference intervals of packed cell volume (PCV) and 20 plasma chemistry analytes from wild oceanic-juvenile stage loggerhead turtles from Azorean waters, (2) investigate correlations with body size (minimum straight carapace length: SCLmin) and (3) compare plasma chemistry data to those from older, larger neritic juveniles (<80 cm SCLmin) and adult loggerheads (≥80 cm SCLmin) that have recruited to the West Atlantic in waters around Cape Canaveral, Florida. Twenty-eight Azorean loggerhead turtles with SCLmin of 17.6–60.0 cm (mean 34.9 ± 12.1 cm) were captured, sampled and immediately released. Reference intervals are reported. There were several biologically relevant correlations of blood analytes with SCLmin: positive correlations of PCV, proteins and triglycerides with SCLmin indicated somatic growth, increasing diving activity and/or diet; negative correlations of tissue enzymes with SCLmin suggested faster growth at smaller turtle size, while negative correlations of electrolytes with SCLmin indicated differences in diet, environmental conditions and/or osmoregulation unique to the geographic location. Comparisons of loggerhead turtles from the Azores (i.e. oceanic) and Cape Canaveral (i.e. neritic) identified significant differences regarding diet, somatic growth, and/or environment: in Azorean turtles, albumin, triglycerides and bilirubin increased with SCLmin, while alkaline phosphatase, lactate dehydrogenase and sodium decreased. In larger neritic Cape Canaveral turtles, aspartate aminotransferase increased with SCLmin, while the albumin:globulin ratio, phosphorus and cholesterol decreased. These differences suggest unique physiological disparities between life stage development and migration, reflecting biological and habitat differences between the two populations. This information presents biologically important data that is applicable to stranded individual turtles and to the population level, a tool for the development of conservation strategies, and a baseline for future temporal and spatial investigations of the Azorean loggerhead sea turtle population. PMID:29479433

Movement patterns for a critically endangered species, the leatherback turtle (Dermochelys coriacea), linked to foraging success and population status.

PubMed

Bailey, Helen; Fossette, Sabrina; Bograd, Steven J; Shillinger, George L; Swithenbank, Alan M; Georges, Jean-Yves; Gaspar, Philippe; Strömberg, K H Patrik; Paladino, Frank V; Spotila, James R; Block, Barbara A; Hays, Graeme C

2012-01-01

Foraging success for pelagic vertebrates may be revealed by horizontal and vertical movement patterns. We show markedly different patterns for leatherback turtles in the North Atlantic versus Eastern Pacific, which feed on gelatinous zooplankton that are only occasionally found in high densities. In the Atlantic, travel speed was characterized by two modes, indicative of high foraging success at low speeds (<15 km d(-1)) and transit at high speeds (20-45 km d(-1)). Only a single mode was evident in the Pacific, which occurred at speeds of 21 km d(-1) indicative of transit. The mean dive depth was more variable in relation to latitude but closer to the mean annual depth of the thermocline and nutricline for North Atlantic than Eastern Pacific turtles. The most parsimonious explanation for these findings is that Eastern Pacific turtles rarely achieve high foraging success. This is the first support for foraging behaviour differences between populations of this critically endangered species and suggests that longer periods searching for prey may be hindering population recovery in the Pacific while aiding population maintenance in the Atlantic.

Movement Patterns for a Critically Endangered Species, the Leatherback Turtle (Dermochelys coriacea), Linked to Foraging Success and Population Status

PubMed Central

Bailey, Helen; Fossette, Sabrina; Bograd, Steven J.; Shillinger, George L.; Swithenbank, Alan M.; Georges, Jean-Yves; Gaspar, Philippe; Strömberg, K. H. Patrik; Paladino, Frank V.; Spotila, James R.; Block, Barbara A.; Hays, Graeme C.

2012-01-01

Foraging success for pelagic vertebrates may be revealed by horizontal and vertical movement patterns. We show markedly different patterns for leatherback turtles in the North Atlantic versus Eastern Pacific, which feed on gelatinous zooplankton that are only occasionally found in high densities. In the Atlantic, travel speed was characterized by two modes, indicative of high foraging success at low speeds (<15 km d−1) and transit at high speeds (20–45 km d−1). Only a single mode was evident in the Pacific, which occurred at speeds of 21 km d−1 indicative of transit. The mean dive depth was more variable in relation to latitude but closer to the mean annual depth of the thermocline and nutricline for North Atlantic than Eastern Pacific turtles. The most parsimonious explanation for these findings is that Eastern Pacific turtles rarely achieve high foraging success. This is the first support for foraging behaviour differences between populations of this critically endangered species and suggests that longer periods searching for prey may be hindering population recovery in the Pacific while aiding population maintenance in the Atlantic. PMID:22615767

The feeding habit of sea turtles influences their reaction to artificial marine debris

NASA Astrophysics Data System (ADS)

Fukuoka, Takuya; Yamane, Misaki; Kinoshita, Chihiro; Narazaki, Tomoko; Marshall, Greg J.; Abernathy, Kyler J.; Miyazaki, Nobuyuki; Sato, Katsufumi

2016-06-01

Ingestion of artificial debris is considered as a significant stress for wildlife including sea turtles. To investigate how turtles react to artificial debris under natural conditions, we deployed animal-borne video cameras on loggerhead and green turtles in addition to feces and gut contents analyses from 2007 to 2015. Frequency of occurrences of artificial debris in feces and gut contents collected from loggerhead turtles were 35.7% (10/28) and 84.6% (11/13), respectively. Artificial debris appeared in all green turtles in feces (25/25) and gut contents (10/10), and green turtles ingested more debris (feces; 15.8 ± 33.4 g, gut; 39.8 ± 51.2 g) than loggerhead turtles (feces; 1.6 ± 3.7 g, gut; 9.7 ± 15.0 g). In the video records (60 and 52.5 hours from 10 loggerhead and 6 green turtles, respectively), turtles encountered 46 artificial debris and ingested 23 of them. The encounter-ingestion ratio of artificial debris in green turtles (61.8%) was significantly higher than that in loggerhead turtles (16.7%). Loggerhead turtles frequently fed on gelatinous prey (78/84), however, green turtles mainly fed marine algae (156/210), and partly consumed gelatinous prey (10/210). Turtles seemed to confuse solo drifting debris with their diet, and omnivorous green turtles were more attracted by artificial debris.

The feeding habit of sea turtles influences their reaction to artificial marine debris

PubMed Central

Fukuoka, Takuya; Yamane, Misaki; Kinoshita, Chihiro; Narazaki, Tomoko; Marshall, Greg J.; Abernathy, Kyler J.; Miyazaki, Nobuyuki; Sato, Katsufumi

2016-01-01

Ingestion of artificial debris is considered as a significant stress for wildlife including sea turtles. To investigate how turtles react to artificial debris under natural conditions, we deployed animal-borne video cameras on loggerhead and green turtles in addition to feces and gut contents analyses from 2007 to 2015. Frequency of occurrences of artificial debris in feces and gut contents collected from loggerhead turtles were 35.7% (10/28) and 84.6% (11/13), respectively. Artificial debris appeared in all green turtles in feces (25/25) and gut contents (10/10), and green turtles ingested more debris (feces; 15.8 ± 33.4 g, gut; 39.8 ± 51.2 g) than loggerhead turtles (feces; 1.6 ± 3.7 g, gut; 9.7 ± 15.0 g). In the video records (60 and 52.5 hours from 10 loggerhead and 6 green turtles, respectively), turtles encountered 46 artificial debris and ingested 23 of them. The encounter-ingestion ratio of artificial debris in green turtles (61.8%) was significantly higher than that in loggerhead turtles (16.7%). Loggerhead turtles frequently fed on gelatinous prey (78/84), however, green turtles mainly fed marine algae (156/210), and partly consumed gelatinous prey (10/210). Turtles seemed to confuse solo drifting debris with their diet, and omnivorous green turtles were more attracted by artificial debris. PMID:27305858

A range-wide occupancy estimate and habitat model for the endangered Point Arena mountain beaver (Aplodontia rufa nigra)

Treesearch

William J. Zielinski; Fredrick V. Schlexer; Jeffrey R. Dunk; Matthew J. Lau; James J. Graham

2015-01-01

The mountain beaver (Aplodontia rufa) is notably the most primitive North American rodent with a restricted distribution in the Pacific Northwest based on its physiological limits to heat stress and water needs. The Point Arena subspecies (A. r. nigra) is federally listed as endangered and is 1 of 2 subspecies that have extremely...

Pacific Salmon in aquatic and terrestrial ecosystem.

Treesearch

S.M. Gende; R.T. Edwards; M.F. Willson; M.S. Wipfli

2002-01-01

almon runs in the Pacific Northwest have been declining for decades, so much so that many runs are threatened or endangered; others have been completely extirpated (Nehlsen et al. 1991). This "salmon crisis" looms large in the public eye, because it has serious and wideranging economic, cultural, and ecological repercussions. Billions of dollars have gone...

Critically endangered western gray whales migrate to the eastern North Pacific.

PubMed

Mate, Bruce R; Ilyashenko, Valentin Yu; Bradford, Amanda L; Vertyankin, Vladimir V; Tsidulko, Grigory A; Rozhnov, Vyacheslav V; Irvine, Ladd M

2015-04-01

Western North Pacific gray whales (WGWs), once considered extinct, are critically endangered with unknown migratory routes and reproductive areas. We attached satellite-monitored tags to seven WGWs on their primary feeding ground off Sakhalin Island, Russia, three of which subsequently migrated to regions occupied by non-endangered eastern gray whales (EGWs). A female with the longest-lasting tag visited all three major EGW reproductive areas off Baja California, Mexico, before returning to Sakhalin Island the following spring. Her 22 511 km round-trip is the longest documented mammal migration and strongly suggests that some presumed WGWs are actually EGWs foraging in areas historically attributed to WGWs. The observed migration routes provide evidence of navigational skills across open water that break the near-shore north-south migratory paradigm of EGWs. Despite evidence of genetic differentiation, these tagging data indicate that the population identity of whales off Sakhalin Island needs further evaluation. © 2015 The Author(s) Published by the Royal Society. All rights reserved.

Successive changes of hematologic characteristics and plasma chemistry values of juvenile loggerhead turtles (Caretta caretta).

PubMed

Kakizoe, Yuka; Sakaoka, Ken; Kakizoe, Futoshi; Yoshii, Makoto; Nakamura, Hitoshi; Kanou, Yoshihiko; Uchida, Itaru

2007-03-01

Hematologic characteristics and plasma chemistry values of juvenile loggerhead turtles (Caretta caretta) from the ages of 1 mo to 3 yr were obtained to establish baseline values. Five clinically normal loggerhead turtles were selected from the same clutch and raised in an indoor artificial nesting beach. Blood samples were successively collected and examined for various blood characteristics for a maximum total of 15 times. Hematologic characteristics, including packed cell volume, white blood cell counts, and white blood cell differentials; and plasma chemistry values, including total bilirubin, total protein, albumin, glutamic oxaloacetic transaminase, glutamic pyruvic transaminase, gamma-glutamic transpeptidase, creatinine, blood urea nitrogen, uric acid, alkaline phosphatase, amylase, triglyceride, total cholesterol, ionized sodium, ionized potassium and ionized chlorine, were measured. These results were used to establish a hematology and blood chemistry baseline for captive juvenile loggerhead turtles and will aid in their medical management.

Parallel Patterns of Host-Specific Morphology and Genetic Admixture in Sister Lineages of a Commensal Barnacle.

PubMed

Ewers-Saucedo, Christine; Chan, Benny K K; Zardus, John D; Wares, John P

2017-06-01

Symbiotic relationships are often species specific, allowing symbionts to adapt to their host environments. Host generalists, on the other hand, have to cope with diverse environments. One coping strategy is phenotypic plasticity, defined by the presence of host-specific phenotypes in the absence of genetic differentiation. Recent work indicates that such host-specific phenotypic plasticity is present in the West Pacific lineage of the commensal barnacle Chelonibia testudinaria (Linnaeus, 1758). We investigated genetic and morphological host-specific structure in the genetically distinct Atlantic sister lineage of C. testudinaria. We collected adult C. testudinaria from loggerhead sea turtles, horseshoe crabs, and blue crabs along the eastern U.S. coast between Delaware and Florida and in the Gulf of Mexico off Mississippi. We find that shell morphology, especially shell thickness, is host specific and comparable in similar host species between the Atlantic and West Pacific lineages. We did not detect significant genetic differentiation related to host species when analyzing data from 11 nuclear microsatellite loci and mitochondrial sequence data, which is comparable to findings for the Pacific lineage. The most parsimonious explanation for these parallel patterns between distinct lineages of C. testudinaria is that C. testudinaria maintained phenotypic plasticity since the lineages diverged 4-5 mya.

From trees to seas--Marbled Murrelet numbers are down

Treesearch

Martin G. Raphael; Gary A. Falxa; Joan O' Callaghan

2013-01-01

In 1992, the marbled murrelet population in the Pacific Northwest was listed as threatened under the federal Endangered Species Act, along with the northern spotted owl and Pacific salmon. These designations were embodied in the 1994 Northwest Forest Plan, which takes an ecosystem approach to managing about 25 million acres of federal lands, with a goal of...

Four new species of Cyrtandra (Gesneriaceae) from the South Pacific islands of Fiji.

PubMed

Johnson, Melissa A

2017-01-01

During fieldwork in Fiji, four new species of Cyrtandra (Gesneriaceae) were discovered and are described herein: C. gregoryi M.A.Johnson, sp. nov. , C. hispida M.A.Johnson, sp. nov. , C. longifructosa M.A.Johnson, sp. nov. , and C. waisaliensis M.A.Johnson, sp. nov. The addition of four new species brings the current number of Fijian Cyrtandra to 41 endemic species. Two of the four species are known from only a single locality, and all of the new species are likely endangered or critically endangered. Continued fieldwork in the islands of Fiji is warranted in order to better understand current species distributions and population demographics of Cyrtandra in this species-rich and still poorly explored region of the South Pacific.

Bahamas connection: residence areas selected by breeding female loggerheads tagged in Dry Tortugas National Park, USA

USGS Publications Warehouse

Hart, Kristen M.; Sartain-Iverson, Autumn R.; Fujisaki, Ikuko

2015-01-01

We demonstrate a previously unknown link between Dry Tortugas nesting beaches and Bahamas residence areas; 17/39 (43.6%) of nesting loggerheads tagged in and tracked from the Dry Tortugas take up residence at sites in the Bahamas. Residence area estimates for these turtles were similar in size to previous foraging area estimates for two turtles tracked to the Bahamas in other studies. We show inter-annual residence area repeatability, and that residence areas of different individuals generally did not overlap. We suggest that these loggerheads possibly establish territories.

Survey on the presence of non-dioxine-like PCBs (NDL-PCBs) in loggerhead turtles (Caretta caretta) stranded in south Mediterranean coasts (Sicily, Southern Italy).

PubMed

Cammilleri, Gaetano; Calvaruso, Enza; Pantano, Licia; Cascio, Giovanni Lo; Randisi, Barbara; Macaluso, Andrea; Vazzana, Mirella; Caracappa, Giulia; Giangrosso, Giuseppe; Vella, Antonio; Ferrantelli, Vincenzo

2017-11-01

A total of 71 loggerhead turtles (Caretta caretta) stranded along the coasts of Sicily (Southern Italy) were examined for non-dioxine like polychlorinated biphenyl (NDL-PCB) levels in muscle and adipose tissue by a gas chromatography-mass spectrometry/mass spectrometry (GC-MS/MS) method. The results revealed 6 high-indicator congener (∑ 6 PCB IND ) levels in 45% of the loggerhead turtles examined, with mean values of 980.39 ± 2508.39 ng/g wet weight in adipose tissue and 102.53 ± 238.58 ng/g wet weight in muscle tissue. The hexachloro and heptachloro PCB congeners were the most abundant in both the sample types. The highest NDL-PCB levels were reached in an adipose tissue sample of a loggerhead turtle of 80 kg stranded along the coasts of Termini Imerese (14 183.85 ng/g wet wt). No significant correlation was found between modified Fulton's K values of the loggerhead turtles and PCB contents (S = 47 151, p > 0.05). Furthermore, no significant differences were found between sexes (W = 365, p >  0.05). The PCB levels found in the present study were much higher than those found in the literature. The present study is the first report on the existence of NDL-PCBs in loggerhead turtles stranded in Sicilian coasts confirming C. caretta as a valuable indicator of contaminant exposure in the marine environment because of their specific biological and ecological characteristics. Environ Toxicol Chem 2017;36:2997-3002. © 2017 SETAC. © 2017 SETAC.

ULTRASONOGRAPHIC DETECTION OF INGESTED FISHING LINES IN LOGGERHEADS ( CARETTA CARETTA).

PubMed

Franchini, Delia; Valastro, Carmela; Ciccarelli, Stefano; Caprio, Francesco; Lenoci, Diana; Di Bello, Antonio

2018-05-23

Loggerhead sea turtles ( Caretta caretta) are among the most frequent victims of bycatch in drifting longlines, and the ingestion of fish hooks and fishing lines is one of the most frequent causes of death of sea turtles. The aim of this study was to evaluate whether coelomic ultrasound (US) can be decisive, not only for diagnosis but also to optimize surgical planning based on preoperative evaluation of the bowel conditions and, in addition, to see if there are characteristic sonographic findings in sea turtles associated with the ingestion of fishing lines. Physical examination, hematology, blood chemistry, radiographs, and US examination were performed in 37 loggerhead sea turtles with suspected or known ingestion of fish hooks or monofilament fishing lines. During the ultrasonographic examinations, the loggerhead sea turtles were placed in dorsal recumbency and the prefemoral left and right acoustic windows were used. Nine wild loggerheads had sonographic findings of intestinal and coelomic abnormalities, and the sonographic images were compared with the surgical findings. Ultrasonography positively identified the foreign body in 89% (8/9) animals. The presence of intestinal plication (in all loggerhead turtles) and ultrasonographic visualization of the linear foreign body was always consistent with the ingestion of a fishing line. In sea turtles, fishing lines cause a corrugated appearance in the small intestine due to increased/unproductive peristalsis. The affected small bowel loops are usually dilated with fluid. In the present study, coelomic US allowed us to make a thorough evaluation of the characteristics, number, and severity of the bowel wall lesions in the animals, thus ensuring the planning of a correct surgical procedure. We suggest that US examination of the coelomic cavity should be complementary to radiographic survey in cases of suspected ingestion of fish hooks and fishing lines by sea turtles.

Plastic ingestion in oceanic-stage loggerhead sea turtles (Caretta caretta) off the North Atlantic subtropical gyre.

PubMed

Pham, Christopher K; Rodríguez, Yasmina; Dauphin, Axelle; Carriço, Rita; Frias, João P G L; Vandeperre, Frederic; Otero, Vanessa; Santos, Marco R; Martins, Helen R; Bolten, Alan B; Bjorndal, Karen A

2017-08-15

Juvenile oceanic-stage sea turtles are particularly vulnerable to the increasing quantity of plastic coming into the oceans. In this study, we analysed the gastrointestinal tracts of 24 juvenile oceanic-stage loggerheads (Caretta caretta) collected off the North Atlantic subtropical gyre, in the Azores region, a key feeding ground for juvenile loggerheads. Twenty individuals were found to have ingested marine debris (83%), composed exclusively of plastic items (primarily polyethylene and polypropylene) identified by μ-Fourier Transform Infrared Spectroscopy. Large microplastics (1-5mm) represented 25% of the total number of debris and were found in 58% of the individuals sampled. Average number of items was 15.83±6.09 (±SE) per individual, corresponding to a mean dry mass of 1.07±0.41g. The results of this study demonstrate that plastic pollution acts as another stressor for this critical life stage of loggerhead turtles in the North Atlantic. Copyright © 2017 Elsevier Ltd. All rights reserved.

Continued Development of the SEAMAP Data Archive

DTIC Science & Technology

2007-09-01

Acoustic Surveys 01-02 boat mammals 462 344 Baltic Porpoise Sightings 01-02 boat mammals 55 346 Cabo Verde ( Proyecto Aegina): male and "Hortensia...34 loggerheads tag turtles 2021 347 Islas Canarias ( Proyecto Aegina): juvenile loggerheads tag turtles 1187 349 Cayman Islands 2003 tag turtles 1561

Four new species of Cyrtandra (Gesneriaceae) from the South Pacific islands of Fiji

PubMed Central

Johnson, Melissa A.

2017-01-01

Abstract During fieldwork in Fiji, four new species of Cyrtandra (Gesneriaceae) were discovered and are described herein: C. gregoryi M.A.Johnson, sp. nov., C. hispida M.A.Johnson, sp. nov., C. longifructosa M.A.Johnson, sp. nov., and C. waisaliensis M.A.Johnson, sp. nov. The addition of four new species brings the current number of Fijian Cyrtandra to 41 endemic species. Two of the four species are known from only a single locality, and all of the new species are likely endangered or critically endangered. Continued fieldwork in the islands of Fiji is warranted in order to better understand current species distributions and population demographics of Cyrtandra in this species-rich and still poorly explored region of the South Pacific. PMID:29308040

Comparative health assessment of Western Pacific leatherback turtles (Dermochelys coriacea) foraging off the coast of California, 2005-2007.

PubMed

Harris, Heather S; Benson, Scott R; Gilardi, Kirsten V; Poppenga, Robert H; Work, Thierry M; Dutton, Peter H; Mazet, Jonna A K

2011-04-01

Leatherback turtles (Dermochelys coriacea) are critically endangered, primarily threatened by the overharvesting of eggs, fisheries entanglement, and coastal development. The Pacific leatherback population has experienced a catastrophic decline over the past two decades. Leatherbacks foraging off the coast of California are part of a distinct Western Pacific breeding stock that nests on beaches in Indonesia, Papua New Guinea, and the Solomon Islands. Although it has been proposed that the rapid decline of Pacific leatherback turtles is due to increased adult mortality, little is known about the health of this population. Health assessments in leatherbacks have examined females on nesting beaches, which provides valuable biological information, but might have limited applicability to the population as a whole. During September 2005 and 2007, we conducted physical examinations on 19 foraging Pacific leatherback turtles and measured normal physiologic parameters, baseline hematologic and plasma biochemistry values, and exposure to heavy metals (cadmium, lead, and mercury), organochlorine contaminants, and domoic acid. We compared hematologic values of foraging Pacific leatherbacks with their nesting counterparts in Papua New Guinea (n=11) and with other nesting populations in the Eastern Pacific in Costa Rica (n=8) and in the Atlantic in St. Croix (n=12). This study provides the most comprehensive assessment to date of the health status of leatherbacks in the Pacific. We found significant differences in blood values between foraging and nesting leatherbacks, which suggests that health assessment studies conducted only on nesting females might not accurately represent the whole population. The establishment of baseline physiologic data and blood values for healthy foraging leatherback turtles, including males, provides valuable data for long-term health monitoring and comparative studies of this endangered population.

Comparative health assessment of western Pacific leatherback turtles (Dermochelys coriacea) foraging off the coast of California, 2005-2007

USGS Publications Warehouse

Harris, Heather S.; Benson, Scott R.; Gilardi, Kirsten V.; Poppenga, Robert H.; Work, Thierry M.; Dutton, Peter H.; Mazet, Jonna A.K.

2011-01-01

Leatherback turtles (Dermochelys coriacea) are critically endangered, primarily threatened by the overharvesting of eggs, fisheries entanglement, and coastal development. The Pacific leatherback population has experienced a catastrophic decline over the past two decades. Leatherbacks foraging off the coast of California are part of a distinct Western Pacific breeding stock that nests on beaches in Indonesia, Papua New Guinea, and the Solomon Islands. Although it has been proposed that the rapid decline of Pacific leatherback turtles is due to increased adult mortality, little is known about the health of this population. Health assessments in leatherbacks have examined females on nesting beaches, which provides valuable biological information, but might have limited applicability to the population as a whole. During September 2005 and 2007, we conducted physical examinations on 19 foraging Pacific leatherback turtles and measured normal physiologic parameters, baseline hematologic and plasma biochemistry values, and exposure to heavy metals (cadmium, lead, and mercury), organochlorine contaminants, and domoic acid. We compared hematologic values of foraging Pacific leatherbacks with their nesting counterparts in Papua New Guinea (n=11) and with other nesting populations in the Eastern Pacific in Costa Rica (n=8) and in the Atlantic in St. Croix (n=12). This study provides the most comprehensive assessment to date of the health status of leatherbacks in the Pacific. We found significant differences in blood values between foraging and nesting leatherbacks, which suggests that health assessment studies conducted only on nesting females might not accurately represent the whole population. The establishment of baseline physiologic data and blood values for healthy foraging leatherback turtles, including males, provides valuable data for long-term health monitoring and comparative studies of this endangered population.

77 FR 37877 - Endangered Species; File No. 17022

Federal Register 2010, 2011, 2012, 2013, 2014

2012-06-25

... NMFS Pacific Islands Fisheries Science Center (PIFSC; Samuel Pooley, Ph.D., Responsible Party), has... turtles for purposes of scientific research. DATES: Written, telefaxed, or email comments must be received...

76 FR 35842 - Endangered Species; File No. 15685

Federal Register 2010, 2011, 2012, 2013, 2014

2011-06-20

... NMFS Pacific Islands Fisheries Science Center (PIFSC; Samuel Pooley, PhD, Responsible Party), has... turtles for purposes of scientific research. DATES: Written, telefaxed, or e-mail comments must be...

Natural re-colonization and admixture of wolves (Canis lupus) in the US Pacific Northwest: challenges for the protection and management of rare and endangered taxa.

PubMed

Hendricks, Sarah A; Schweizer, Rena M; Harrigan, Ryan J; Pollinger, John P; Paquet, Paul C; Darimont, Chris T; Adams, Jennifer R; Waits, Lisette P; vonHoldt, Bridgett M; Hohenlohe, Paul A; Wayne, Robert K

2018-06-07

Admixture resulting from natural dispersal processes can potentially generate novel phenotypic variation that may facilitate persistence in changing environments or result in the loss of population-specific adaptations. Yet, under the US Endangered Species Act, policy is limited for management of individuals whose ancestry includes a protected taxon; therefore, they are generally not protected under the Act. This issue is exemplified by the recently re-established grey wolves of the Pacific Northwest states of Washington and Oregon, USA. This population was likely founded by two phenotypically and genetically distinct wolf ecotypes: Northern Rocky Mountain (NRM) forest and coastal rainforest. The latter is considered potentially threatened in southeast Alaska and thus the source of migrants may affect plans for their protection. To assess the genetic source of the re-established population, we sequenced a ~ 300 bp portion of the mitochondrial control region and ~ 5 Mbp of the nuclear genome. Genetic analysis revealed that the Washington wolves share ancestry with both wolf ecotypes, whereas the Oregon population shares ancestry with NRM forest wolves only. Using ecological niche modelling, we found that the Pacific Northwest states contain environments suitable for each ecotype, with wolf packs established in both environmental types. Continued migration from coastal rainforest and NRM forest source populations may increase the genetic diversity of the Pacific Northwest population. However, this admixed population challenges traditional management regimes given that admixture occurs between an adaptively distinct ecotype and a more abundant reintroduced interior form. Our results emphasize the need for a more precise US policy to address the general problem of admixture in the management of endangered species, subspecies, and distinct population segments.

Presumed drowning of Aleutian Canada geese on the Pacific coast of California and Oregon

USGS Publications Warehouse

Springer, Paul F.; Lowe, Roy W.; Stroud, Richard K.; Gullett, Patricia A.

1989-01-01

Carcasses of 42 and 17 Aleutian Canada geese (Branta canadensis leucopareia), a federally listed endangered species, were found on ocean beaches near Crescent City, California, and near Pacific City, Oregon, respectively, following severe storms. Necropsies and other information suggest that the birds were flushed during the storms and somehow entered the water where they were washed into the surf and drowned.

A sandpiper wades in the water at KSC

NASA Technical Reports Server (NTRS)

1999-01-01

A sandpiper wades the water in the Merritt Island National Wildlife Refuge, which shares a boundary with the space center. Sandpipers are usually seen foraging on the beach or margins of lakes, ponds, marshes or streams. The open waters of the Wildlife Refuge provide wintering areas for 23 species of migratory waterfowl as well as a year-round home for great blue herons, great egrets, wood storks, cormorants, brown pelicans and other species of marsh and shore birds. The refuge comprises 92,000 acres, ranging from fresh-water impoundments, salt-water estuaries and brackish marshes to hardwood hammocks and pine flatwoods. The diverse landscape provides habitat for more than 310 species of birds, 25 mammals, 117 fishes, and 65 amphibians and reptiles, including such endangered species as Southern bald eagles, wood storks, Florida scrub jays, Atlantic loggerhead and leatherback turtles, osprey, and nearly 5,000 alligators.

KSC-99pc65

NASA Image and Video Library

1999-01-14

KENNEDY SPACE CENTER, FLA. -- A pintail duck swims calmly in the waters of the Merritt Island National Wildlife Refuge, which shares a boundary with the space center. The pintail can be found in marshes, prairie ponds and tundra, and salt marshes in winter. They range from Alaska and Greenland south to Central America and the West Indies. The open waters of the Wildlife Refuge provide wintering areas for 23 species of migratory waterfowl as well as a year-round home for great blue herons, great egrets, wood storks, cormorants, brown pelicans and other species of marsh and shore birds. The refuge comprises 92,000 acres, ranging from fresh-water impoundments, salt-water estuaries and brackish marshes to hardwood hammocks and pine flatwoods. The diverse landscape provides habitat for more than 310 species of birds, 25 mammals, 117 fishes, and 65 amphibians and reptiles, including such endangered species as Southern bald eagles, wood storks, Florida scrub jays, Atlantic loggerhead and leatherback turtles, osprey, and nearly 5,000 alligators

The short-tailed Albatross, Diomedea albatrus, its status, distribution and natural history

USGS Publications Warehouse

Hasegawa, H.; DeGange, A.R.

1982-01-01

The Short-tailed Albatross (Diomedea albatrus) is presently an Endangered Species that was formerly abundant in the North Pacific. Owing to the activities of feather hunters operating on the albatross's nesting grounds for a 50-year period in the late 19th and early 20th centuries, the species was almost reduced to extinction. The Short-tailed Albatross is the largest of the three species of Diomedea that breed in the North Pacific (Table 1) and when mature is the only albatross in the North Pacific with a white back.

Taxonomy of the Loggerhead Kingbird (Tyrannus caudifasciatus) complex (Aves: Tyrannidae)

Treesearch

Orlando H. Garrido; James W. Wiley; George B. Reynard

2009-01-01

We examined the complex of populations of the Loggerhead Kingbird (Tyrannus caudifasciatus), a West Indian endemic. We separate populations in Puerto Rico and Isla Vieques (T. taylori), and Hispaniola (T. gabbii) as distinct species. Subspecific distinction is assigned to populations in Cuba, Isla de Pinos, and Cuban satellites (T. caudifasciatus caudifasciatus);...

Examination of reptilian erythrocytes as models of the progenitor of mammalian red blood cells.

PubMed

Mauro, N A; Isaacks, R E

1997-04-01

Among the reptile species examined, only loggerhead turtle RBC with their high capacity of anaerobic metabolism and low oxygen uptake possess all the suitable metabolic characteristics as a model for transition from aerobic to anaerobic metabolism of mammalian erythrocytes (RBC). Neither the alligator RBC, which lack a significant level of anaerobic metabolism, nor the savannah monitor lizard RBC with their higher level of temperature-dependent aerobic metabolism, possess all the characteristics suitable as a model for the metabolic evolution of mammalian RBC. In the formation of this metabolic model, no phylogenetic relationships are implied or inferred. The metabolic similarity of loggerhead turtle RBC to mammalian RBC is further indicated by the high activity of the pentose phosphate (PPO4) pathway, as evidenced by the low thermal sensitivity of their oxygen uptake and by their low 14C6O2/14C1O2 ratios. By comparison, although the 14C6O2/14C1O2 ratios of both alligator and monitor lizard RBC are low as compared to loggerhead turtle RBC, only alligator RBC share with loggerhead turtle RBC a low thermal sensitivity of their oxygen uptake. A comparison of hemoglobin concentrations relative to hematocrit for loggerhead turtle, alligator and monitor lizard RBC indicates that RBC hemoglobin concentrations are approximately the same for each of these species. Apart from this similarity, RBC from these three species of reptiles were differentiated in this study with respect to their density and osmotic fragility.

77 FR 3279 - Endangered and Threatened Wildlife and Plants; Recovery Permit Applications

Federal Register 2010, 2011, 2012, 2013, 2014

2012-01-23

... with monitoring and population studies on Pacific islands nesting beaches (Midway Atoll, Johnston Atoll, Palmyra Atoll, Kingman Reef, Howland Island, Baker Island, Jarvis Island, Wake Island, American Samoa...

Decreasing annual nest counts in a globally important loggerhead sea turtle population.

PubMed

Witherington, Blair; Kubilis, Paul; Brost, Beth; Meylan, Anne

2009-01-01

The loggerhead sea turtle (Caretta caretta) nests on sand beaches, has both oceanic and neritic life stages, and migrates internationally. We analyzed an 18-year time series of Index Nesting Beach Survey (Index) nest-count data to describe spatial and temporal trends in loggerhead nesting on Florida (USA) beaches. The Index data were highly resolved: 368 fixed zones (mean length 0.88 km) were surveyed daily during annual 109-day survey seasons. Spatial and seasonal coverage averaged 69% of estimated total nesting by loggerheads in the state. We carried out trend analyses on both annual survey-region nest-count totals (N = 18) and annual zone-level nest densities (N = 18 x 368 = 6624). In both analyses, negative binomial regression models were used to fit restricted cubic spline curves to aggregated nest counts. Between 1989 and 2006, loggerhead nest counts on Florida Index beaches increased and then declined, with a net decrease over the 18-year period. This pattern was evident in both a trend model of annual survey-region nest-count totals and a mixed-effect, "single-region" trend model of annual zone-level nest densities that took into account both spatial and temporal correlation between counts. We also saw this pattern in a zone-level model that allowed trend line shapes to vary between six coastal subregions. Annual mean zone-level nest density declined significantly (-28%; 95% CI: -34% to -21%) between 1989 and 2006 and declined steeply (-43%; 95% CI: -48% to -39%) during 1998-2006. Rates of change in annual mean nest density varied more between coastal subregions during the "mostly increasing" period prior to 1998 than during the "steeply declining" period after 1998. The excellent fits (observed vs. expected count R2 > 0.91) of the mixed-effect zone-level models confirmed the presence of strong, positive, within-zone autocorrelation (R > 0.93) between annual counts, indicating a remarkable year-to-year consistency in the longshore spatial distribution of nests over the survey region. We argue that the decline in annual loggerhead nest counts in peninsular Florida can best be explained by a decline in the number of adult female loggerheads in the population. Causes of this decline are explored.

A loggerhead shrike in the Merritt Island National Wildlife Refuge

NASA Technical Reports Server (NTRS)

1999-01-01

A loggerhead shrike perches on a branch in the Merritt Island National Wildlife Refuge, which shares a boundary with Kennedy Space Center. The loggerhead shrike prefers grasslands, orchards and open areas with scattered trees throughout a range extending from southern Canada to southern Florida and the Gulf Coast. The Refuge encompasses 92,000 acres that are a habitat for more than 331 species of birds, 31 mammals, 117 fishes, and 65 amphibians and reptiles. The marshes and open water of the refuge provide wintering areas for 23 species of migratory waterfowl, as well as a year-round home for great blue herons, great egrets, wood storks, cormorants, brown pelicans and other species of marsh and shore birds, as well as a variety of insects.

Endangered Species Case - Washington Toxics Coalition v. EPA

EPA Pesticide Factsheets

This Web page provides information on the Washington Toxics Coalition v. EPA case, related to protection of Pacific salmon and steelhead, and links to the biological opinions issued by the NMFS and EPA’s responses.

Toxic elements and associations with hematology, plasma biochemistry, and protein electrophoresis in nesting loggerhead sea turtles (Caretta caretta) from Casey Key, Florida.

PubMed

Perrault, Justin R; Stacy, Nicole I; Lehner, Andreas F; Poor, Savannah K; Buchweitz, John P; Walsh, Catherine J

2017-12-01

Toxic elements (arsenic, cadmium, lead, mercury, selenium, thallium) are a group of contaminants that are known to elicit developmental, reproductive, general health, and immune system effects in reptiles, even at low concentrations. Reptiles, including marine turtles, are susceptible to accumulation of toxic elements due to their long life span, low metabolic rate, and highly efficient conversion of prey into biomass. The objectives of this study were to (1) document concentrations of arsenic, cadmium, lead, mercury, selenium, and thallium in whole blood and keratin from nesting loggerhead sea turtles (Caretta caretta) from Casey Key, Florida and document correlations thereof and (2) correlate whole blood toxic element concentrations to various hematological and plasma biochemistry analytes. Baselines for various hematological and plasma analytes and toxic elements in whole blood and keratin (i.e., scute) in nesting loggerheads are documented. Various correlations between the toxic elements and hematological and plasma biochemistry analytes were identified; however, the most intriguing were negative correlations between arsenic, cadmium, lead, and selenium with and α- and γ-globulins. Although various extrinsic and intrinsic variables such as dietary and feeding changes in nesting loggerheads need to be considered, this finding may suggest a link to altered humoral immunity. This study documents a suite of health variables of nesting loggerheads in correlation to contaminants and identifies the potential of toxic elements to impact the overall health of nesting turtles, thus presenting important implications for the conservation and management of this species. Copyright © 2017 Elsevier Ltd. All rights reserved.

Spatial requirements of different life-stages of the loggerhead turtle (Caretta caretta) from a distinct population segment in the northern Gulf of Mexico

USGS Publications Warehouse

Lamont, Margaret M.; Putman, Nathan F.; Fujisaki, Ikuko; Hart, Kristen M.

2015-01-01

Many marine species have complex life histories that involve disparate developmental, foraging and reproductive habitats and a holistic assessment of the spatial requirements for different life stages is a challenge that greatly complicates their management. Here, we combined data from oceanographic modeling, nesting surveys, and satellite tracking to examine the spatial requirements of different life stages of Loggerhead Turtles (Caretta caretta) from a distinct population segment in the northern Gulf of Mexico. Our findings indicate that after emerging from nesting beaches in Alabama and Northwest Florida, hatchlings disperse widely and the proportion of turtles following a given route varies substantially through time, with the majority (mean of 74.4%) projected to leave the Gulf of Mexico. Adult females use neritic habitat throughout the northern and eastern Gulf of Mexico both during the inter-nesting phase and as post-nesting foraging areas. Movements and habitat use of juveniles and adult males represent a large gap in our knowledge, but given the hatchling dispersal predictions and tracks of post-nesting females it is likely that some Loggerhead Turtles remain in the Gulf of Mexico throughout their life. More than two-thirds of the Gulf provides potential habitat for at least one life-stage of Loggerhead Turtles. These results demonstrate the importance of the Gulf of Mexico to this Distinct Population Segment of Loggerhead Turtles. It also highlights the benefits of undertaking comprehensive studies of multiple life stages simultaneously: loss of individual habitats have the potential to affect several life stages thereby having long-term consequences to population recovery.

Klamath River Basin water-quality data

USGS Publications Warehouse

Smith, Cassandra D.; Rounds, Stewart A.; Orzol, Leonard L.; Sobieszczyk, Steven

2018-05-29

The Klamath River Basin stretches from the mountains and inland basins of south-central Oregon and northern California to the Pacific Ocean, spanning multiple climatic regions and encompassing a variety of ecosystems. Water quantity and water quality are important topics in the basin, because water is a critical resource for farming and municipal use, power generation, and for the support of wildlife, aquatic ecosystems, and endangered species. Upper Klamath Lake is the largest freshwater lake in Oregon (112 square miles) and is known for its seasonal algal blooms. The Klamath River has dams for hydropower and the upper basin requires irrigation water to support agriculture and grazing. Multiple species of endangered fish inhabit the rivers and lakes, and the marshes are key stops on the Pacific flyway for migrating birds. For these and other reasons, the water resources in this basin have been studied and monitored to support their management distribution.

Humoral Immune Responses to Select Marine Bacteria in Loggerhead Sea Turtles Caretta caretta and Kemp's Ridley Sea Turtles Lepidochelys kempii from the Southeastern United States.

PubMed

Rodgers, Maria L; Toline, Catherine A; Rice, Charles D

2018-03-01

Serum from Kemp's ridley sea turtles Lepidochelys kempii and loggerhead sea turtles Caretta caretta was collected during summer in 2011, 2012, and 2013. Serum immunoglobulin Y (IgY) recognition of lysate proteins from nine bacterial species and whole bacterium-specific IgY titers to these pathogens were quantified. Serum and purified IgY recognized proteins of all bacteria, with protein recognition for some species being more pronounced than others. Circulating IgY titers against Vibrio vulnificus, V. anguillarum, Erysipelothrix rhusiopathiae, and Brevundimonas vesicularis changed over the years in Kemp's ridley sea turtles, while IgY titers against V. vulnificus, Escherichia coli, V. parahaemolyticus, B. vesicularis, and Mycobacterium marinum were different in loggerhead sea turtles. Serum lysozyme activity was constant for loggerhead sea turtles over the 3 years, while activity in Kemp's ridley sea turtles was lower in 2011 and 2012 than in 2013. Blood packed cell volume, glucose, and serum protein levels were comparable to those of healthy sea turtles in previous studies; therefore, this study provides baseline information on antibody responses in healthy wild sea turtles. © 2017 American Fisheries Society.

Size-dependent, sex-dependent and seasonal changes in insulin-lige growth-factor-I in the loggerhead sea turtle

USGS Publications Warehouse

Crain, D.A.; Bolten, A.B.; Bjorndal, K.A.; Guillette, L.J.; Gross, T.S.

1995-01-01

This study examines size-dependent, sex-dependent, and seasonal fluctuations in plasma insulin-like growth factor-I (IGF-I) concentrations in loggerhead sea turtles (Caretta caretta). Loggerhead turtles (n = 158) were captured in shrimp trawler nets during a 12-month survey in Cape Canaveral Channel, Florida. Plasma samples were analyzed using a validated heterologous radioimmunoassay. Large turtles (>75 cm straight-line carapace length) had significantly higher plasma IGF-I concentrations than small turtles (⩽75 cm; P < 0.0001). Plasma IGF-I concentrations did not vary seasonally in small turtles, but large turtles had significantly higher plasma IGF-I concentrations during the spring and summer months (P < 0.005). Within the large turtles, adult males had significantly lower IGF-I concentrations than females and subadult males (P < 0.05). These results and a review of loggerhead turtle natural history suggest that the seasonal fluctuations in plasma IGF-I of adult turtles are due to elevated IGF-I levels in reproductively active female turtles. Further research is needed to examine correlations between reproductive activities and plasma IGF-I concentrations in reptiles.

Traditional Banana Diversity in Oceania: An Endangered Heritage

PubMed Central

Kagy, Valérie; Wong, Maurice; Vandenbroucke, Henri; Jenny, Christophe; Dubois, Cécile; Ollivier, Anthony; Cardi, Céline; Mournet, Pierre; Tuia, Valérie; Roux, Nicolas; Doležel, Jaroslav; Perrier, Xavier

2016-01-01

This study aims to understand the genetic diversity of traditional Oceanian starchy bananas in order to propose an efficient conservation strategy for these endangered varieties. SSR and DArT molecular markers are used to characterize a large sample of Pacific accessions, from New Guinea to Tahiti and Hawaii. All Pacific starchy bananas are shown of New Guinea origin, by interspecific hybridization between Musa acuminata (AA genome), more precisely its local subspecies M. acuminata ssp. banksii, and M. balbisiana (BB genome) generating triploid AAB Pacific starchy bananas. These AAB genotypes do not form a subgroup sensu stricto and genetic markers differentiate two subgroups across the three morphotypes usually identified: Iholena versus Popoulu and Maoli. The Popoulu/Maoli accessions, even if morphologically diverse throughout the Pacific, cluster in the same genetic subgroup. However, the subgroup is not strictly monophyletic and several close, but different genotypes are linked to the dominant genotype. One of the related genotypes is specific to New Caledonia (NC), with morphotypes close to Maoli, but with some primitive characters. It is concluded that the diffusion of Pacific starchy AAB bananas results from a series of introductions of triploids originating in New Guinea area from several sexual recombination events implying different genotypes of M. acuminata ssp. banksii. This scheme of multiple waves from the New Guinea zone is consistent with the archaeological data for peopling of the Pacific. The present geographic distribution suggests that a greater diversity must have existed in the past. Its erosion finds parallels with the erosion of cultural traditions, inexorably declining in most of the Polynesian or Melanesian Islands. Symmetrically, diversity hot spots appear linked to the local persistence of traditions: Maoli in New Caledonian Kanak traditions or Iholena in a few Polynesian islands. These results will contribute to optimizing the conservation strategy for the ex-situ Pacific Banana Collection supported collectively by the Pacific countries. PMID:26982801

Traditional Banana Diversity in Oceania: An Endangered Heritage.

PubMed

Kagy, Valérie; Wong, Maurice; Vandenbroucke, Henri; Jenny, Christophe; Dubois, Cécile; Ollivier, Anthony; Cardi, Céline; Mournet, Pierre; Tuia, Valérie; Roux, Nicolas; Doležel, Jaroslav; Perrier, Xavier

2016-01-01

This study aims to understand the genetic diversity of traditional Oceanian starchy bananas in order to propose an efficient conservation strategy for these endangered varieties. SSR and DArT molecular markers are used to characterize a large sample of Pacific accessions, from New Guinea to Tahiti and Hawaii. All Pacific starchy bananas are shown of New Guinea origin, by interspecific hybridization between Musa acuminata (AA genome), more precisely its local subspecies M. acuminata ssp. banksii, and M. balbisiana (BB genome) generating triploid AAB Pacific starchy bananas. These AAB genotypes do not form a subgroup sensu stricto and genetic markers differentiate two subgroups across the three morphotypes usually identified: Iholena versus Popoulu and Maoli. The Popoulu/Maoli accessions, even if morphologically diverse throughout the Pacific, cluster in the same genetic subgroup. However, the subgroup is not strictly monophyletic and several close, but different genotypes are linked to the dominant genotype. One of the related genotypes is specific to New Caledonia (NC), with morphotypes close to Maoli, but with some primitive characters. It is concluded that the diffusion of Pacific starchy AAB bananas results from a series of introductions of triploids originating in New Guinea area from several sexual recombination events implying different genotypes of M. acuminata ssp. banksii. This scheme of multiple waves from the New Guinea zone is consistent with the archaeological data for peopling of the Pacific. The present geographic distribution suggests that a greater diversity must have existed in the past. Its erosion finds parallels with the erosion of cultural traditions, inexorably declining in most of the Polynesian or Melanesian Islands. Symmetrically, diversity hot spots appear linked to the local persistence of traditions: Maoli in New Caledonian Kanak traditions or Iholena in a few Polynesian islands. These results will contribute to optimizing the conservation strategy for the ex-situ Pacific Banana Collection supported collectively by the Pacific countries.

Density of Diadema antillarum (Echinodermata: Echinoidea) on live coral patch reefs and dead Acropora cervicornis rubble patches near Loggerhead Key, Dry Tortugas National Park, Florida, USA

EPA Science Inventory

Density of adult Diadema antillarum was assessed on live coral patch reefs and dead Acropora cervicornis rubble patches next to Loggerhead Key, Dry Tortugas National Park, Florida, USA in June 2009. Mean density on live coral patch reefs (0.49 individuals m-2) was not statistical...

Who are the important predators of sea turtle nests at Wreck Rock beach?

PubMed Central

Booth, David T.

2017-01-01

Excessive sea turtle nest predation is a problem for conservation management of sea turtle populations. This study assessed predation on nests of the endangered loggerhead sea turtle (Caretta caretta) at Wreck Rock beach adjacent to Deepwater National Park in Southeast Queensland, Australia after a control program for feral foxes was instigated. The presence of predators on the nesting dune was evaluated by tracking plots (2 × 1 m) every 100 m along the dune front. There were 21 (2014–2015) and 41 (2015–2016) plots established along the dune, and these were monitored for predator tracks daily over three consecutive months in both nesting seasons. Predator activities at nests were also recorded by the presence of tracks on top of nests until hatchlings emerged. In addition, camera traps were set to record the predator activity around selected nests. The tracks of the fox (Vulpes vulpes) and goanna (Varanus spp) were found on tracking plots. Tracking plots, nest tracks and camera traps indicated goanna abundance varied strongly between years. Goannas were widely distributed along the beach and had a Passive Activity Index (PAI) (0.31 in 2014–2015 and 0.16 in 2015–2016) approximately seven times higher than that of foxes (PAI 0.04 in 2014–2015 and 0.02 in 2015–2016). Five hundred and twenty goanna nest visitation events were recorded by tracks but no fox tracks were found at turtle nests. Camera trap data indicated that yellow-spotted goannas (Varanus panoptes) appeared at loggerhead turtle nests more frequently than lace monitors (V. varius) did, and further that lace monitors only predated nests previously opened by yellow-spotted goannas. No foxes were recorded at nests with camera traps. This study suggests that large male yellow-spotted goannas are the major predator of sea turtle nests at the Wreck Rock beach nesting aggregation and that goanna activity varies between years. PMID:28674666

Occurrence of organochlorine contaminants (PCBs, PCDDs and PCDFs) and pathologic findings in loggerhead sea turtles, Caretta caretta, from the Adriatic Sea (Mediterranean Sea).

PubMed

Storelli, Maria M; Zizzo, Nicola

2014-02-15

Livers of 12 loggerhead sea turtles, Caretta caretta from the Eastern Mediterranean Sea (Adriatic Sea) were analyzed for the presence of polychlorinated biphenyls (PCBs), polychlorinated dibenzo-p-dioxins (PCDDs) and dibenzofurans (PCDFs). Pathological and microbiological studies were also carried out in order to provide a contribution to the knowledge of causes of Mediterranean turtle death. Boat-strike injuries, entanglement in derelict fishing nets and ingestion of hooks and monofilament lines are the causes of death most frequently observed. PCBs (average: 1,399 ng g(-1) fat basis) were the dominant chemicals, followed by PCDFs (average: 61 pg g(-1) fat basic) and PCDDs (average: 16 pg g(-1) fat basis). Hexachlorobiphenyl 153 accounted for the greatest proportion of the total PCBs, followed in order by PCB 138 and PCB 180 (14.1%). Mid-chlorinated, penta-through hepta-PCBs were among the top contributors to the sum of total PCBs, while the homolog pattern of PCCD/Fs was dominated by the tetra- to hexa-substituted congeners. In general the contamination level observed here was comparable with that reported in literature for specimens from different marine areas. Average TEQPCDD/Fs+Dl-PCBs concentration was 27.02 pg g(-1) wet weight (305.1 pg g(-1) lipid weight), with dioxin like-PCBs (93.4%) contributing much more to the total than PCDFs (3.9%) and PCDDs (2.7%). The appreciable concentration of TEQ would at first suggest that there are signs of potential threats to the health of these marine reptiles. Apart from PCBs, this is the first study documenting concentrations of PCDD/Fs in marine turtles from the Mediterranean Sea. Further investigations are urgently needed to characterize their contamination level for a better future protection and conservation of this endangered animal. Copyright © 2013 Elsevier B.V. All rights reserved.

Temporal Assessment of Methylmercury in an Endangered Pacific Seabird (Invited)

NASA Astrophysics Data System (ADS)

Vo, A. E.; Bank, M. S.; Shine, J. P.; Edwards, S. V.

2010-12-01

Methylmercury cycling in the Pacific Ocean has garnered significant attention in recent years, especially with regard to rising mercury emissions from Asia. Uncertainty exists over the extent to which mercury accumulation in biota may have resulted from increases in anthropogenic output over time. To address this, we assessed historical and recent mercury exposure in an endangered Pacific seabird, the Black-footed Albatross (Phoebastria nigripes), using feather samples from museum specimens spanning the past 130 years. We additionally analyzed stable isotopes of nitrogen (δ15N) and carbon (δ13C) to control for confounding factors of temporal change in trophic structure or diet. As a long-lived, wide-ranging, top marine predator and an endangered, keystone species in the North Pacific, the Black-footed Albatross comprises an ideal sentinel species for determining the effect of both global increases in mercury throughout the previous century and regional increases during the recent past on bioaccumulation and risk among avian wildlife. A significantly higher proportion of post-1940 samples contained above deleterious threshold levels (~40,000 ng/g) of methylmercury relative to pre-1940 samples, and mean concentrations were significantly higher in post-1990 than in pre-1990 samples. We also found increasingly higher amounts of (presumably curator-mediated) inorganic mercury contamination in older museum samples for the Black-footed Albatross as well as two non-pelagic comparison species, which informs future studies on bioaccumulation in museum specimens to analyze methylmercury rather than total mercury in all but recently collected specimens. Although complementary stable isotope data suggested no historic change in albatross trophic level, there was a significant change in δ13C signature over time. However, after controlling for these potential confounders, time significantly and positively associated with methylmercury exposure. Changes in methylmercury levels were consistent with historic global and recent regional increases in anthropogenic mercury production, and mercury toxicity may undermine current and future reproductive efforts in the species.

Holocene aggradation of the Dry Tortugas coral reef ecosystem

USGS Publications Warehouse

Brock, J.C.; Palaseanu-Lovejoy, M.; Poore, R.Z.; Nayegandhi, A.; Wright, C.W.

2010-01-01

Radiometric age dating of reef cores acquired at the Dry Tortugas coral reef ecosystem (DTCRE) was merged with lidar topographic mapping to examine Holocene reef development linked to spatial variation in growth and erosion under the control of sea level. Analysis of variance of lidar topography confirmed the presence of three distinct terraces on all three major DTCRE banks (Loggerhead Bank, Garden Bank, and Pulaski Bank). Reef building on the middle terrace (T2) began atop Pleistocene edifices on Loggerhead Bank by 8.0 ka (thousands of years ago) and on Garden Bank by 7.2 ka at elevations of about −16.0 m and −11.9 m, respectively, relative to present mean sea level. Following this initiation at different elevations, T2 aggraded vertically on both banks at different rates during the early Holocene under foundering conditions until a highstand at 5.2 ka, resulting in a 2.21 m offset in present mean T2 elevation between these banks. Initiation of an upper terrace (T1) occurred on both Loggerhead Bank and Garden Bank in association with sea-level fall to a lowstand at near 4.8 ka. This upper terrace initiated on Garden Bank at about 5.0 ka and then grew upward at rate of 2.5 mm year−1 until approximately 3.8 ka. On Loggerhead Bank, the upper T1 terrace formed after 4.5 ka at a higher vertical aggradation rate of 4.1 mm year−1, but at a lower elevation than on Garden Bank. Terrace T1 aggraded on Loggerhead Bank below the elevation of lowstands during late Holocene sea-level oscillation, and consequently erosion on Loggerhead Bank was minimal and likely limited to the crest of the upper terrace. In contrast, after 3.8 ka terrace T1 on Garden Bank likely tracked sea level and consequently underwent erosion when sea level fell to second, third and fourth lowstands at 3.3, 1.1, and 0.3 ka.

Chemical Contaminants Found in the Gastrointestinal Tract of Loggerhead Sea Turtles (Caretta caretta)

NASA Astrophysics Data System (ADS)

Athey, S. N.; Seaton, P. J.; Mead, R. N.

2016-02-01

Plastic is becoming increasingly more abundant in the marine environment. Plastic ingestion has been shown to be a source of exposure to a variety of harmful compounds, such as polycyclic aromatic hydrocarbons (PAHs), bisphenol A (BPA), and phthalates, which are known for their negative physiological effects on the endocrine system as well as their ability to adsorb and leach from plastic into the bodies of marine organisms. The physiological effects of these compounds on loggerhead sea turtles (Caretta caretta) still remain unknown. This study investigated the presence of toxicants on marine plastic samples collected from Bermuda, the Sargasso Sea, and the North Atlantic Ocean. Gas chromatography/triple quadruple mass spectrometry (GC/MS) analysis showed PAHs were present on many plastic debris samples. Plastic additives such as phthalates and (BPA) were also found. ΣPAH concentrations for anthracene, chrysene, benzo[b]fluoranthene, and benzo[k]fluoranthene for 2013 environmental plastic samples averaged 26.7ng/g of plastic. This study also examined the presence of these compounds in fluids from the stomach, small intestine, and large intestine from two adult loggerhead turtles. GC/MS analysis also showed the presence of BPA and phthalates on plastic samples, as well as in two out of the six gastrointestinal fluids samples. Average ΣPAH concentration for GI fluids for the loggerheads in the study was 58.7 ng/mL. This study showed plastic could be a significant source of PAHs in sea turtles and the first to detect PAHs in sea turtle GI fluid. Loggerhead sea turtles are a long living species and could accumulate high concentrations of these endocrine-disrupting chemicals throughout their lifetime.

The ontogeny of morphological defenses in Kemp's ridley (Lepidochelys kempii) and loggerhead (Caretta caretta) sea turtles.

PubMed

Salmon, Michael; Higgins, Benjamin; Stewart, Joshua; Wyneken, Jeanette

2015-08-01

Marine turtles are large reptiles that compensate for high juvenile mortality by producing hundreds of hatchlings during a long reproductive lifespan. Most hatchlings are taken by predators during their migration to, and while resident in, the open ocean. Their survival depends upon crypticity, minimizing movement to avoid detection, and foraging efficiently to grow to a size too difficult for predators to either handle or swallow. While these behavioral antipredator tactics are known, changes in morphology accompanying growth may also improve survival prospects. These have been only superficially described in the literature. Here, we compare the similarities and differences in presumed morphological defenses of growing loggerhead (Caretta caretta) and Kemp's ridley (Lepidochelys kempii) posthatchlings, related species that differ in growth rate, timing of habitat shift (the return from oceanic to neritic locations), and size at maturity. In both species, vertebral spination and carapace widening increase disproportionally as small turtles grow, but later in ontogeny, the spines regress, sooner in ridley than in loggerhead turtles. Carapace widening occurs in both species but loggerheads are always longer than they are wide whereas in Kemp's ridley turtles, the carapace becomes as wide as long. Our analysis indicates that these changes are unrelated to when each species shifts habitat but are related to turtle size. We hypothesize that the spines function in small turtles as an early defense against gape-limited predators, but changes in body shape function throughout ontogeny-initially to make small turtles too wide to swallow and later by presenting an almost flat and hardened surface that large predators (such as a sharks) are unable to grasp. The extremely wide carapace of the Kemp's ridley may compensate for its smaller adult size (and presumed greater vulnerability) than the loggerhead. © 2015 Wiley Periodicals, Inc.

Forelimb kinematics and motor patterns of swimming loggerhead sea turtles (Caretta caretta): are motor patterns conserved in the evolution of new locomotor strategies?

PubMed

Rivera, Angela R V; Wyneken, Jeanette; Blob, Richard W

2011-10-01

Novel functions in animals may evolve through changes in morphology, muscle activity or a combination of both. The idea that new functions or behavior can arise solely through changes in structure, without concurrent changes in the patterns of muscle activity that control movement of those structures, has been formalized as the neuromotor conservation hypothesis. In vertebrate locomotor systems, evidence for neuromotor conservation is found across evolutionary transitions in the behavior of terrestrial species, and in evolutionary transitions from terrestrial species to flying species. However, evolutionary transitions in the locomotion of aquatic species have received little comparable study to determine whether changes in morphology and muscle function were coordinated through the evolution of new locomotor behavior. To evaluate the potential for neuromotor conservation in an ancient aquatic system, we quantified forelimb kinematics and muscle activity during swimming in the loggerhead sea turtle, Caretta caretta. Loggerhead forelimbs are hypertrophied into wing-like flippers that produce thrust via dorsoventral forelimb flapping. We compared kinematic and motor patterns from loggerheads with previous data from the red-eared slider, Trachemys scripta, a generalized freshwater species exhibiting unspecialized forelimb morphology and anteroposterior rowing motions during swimming. For some forelimb muscles, comparisons between C. caretta and T. scripta support neuromotor conservation; for example, the coracobrachialis and the latissimus dorsi show similar activation patterns. However, other muscles (deltoideus, pectoralis and triceps) do not show neuromotor conservation; for example, the deltoideus changes dramatically from a limb protractor/elevator in sliders to a joint stabilizer in loggerheads. Thus, during the evolution of flapping in sea turtles, drastic restructuring of the forelimb was accompanied by both conservation and evolutionary novelty in limb motor patterns.

Two cases of pseudohermaphroditism in loggerhead sea turtles Caretta caretta.

PubMed

Crespo, Jose Luis; García-Párraga, Daniel; Giménez, Ignacio; Rubio-Guerri, Consuelo; Melero, Mar; Sánchez-Vizcaíno, José Manuel; Marco, Adolfo; Cuesta, Jose A; Muñoz, María Jesús

2013-09-03

Two juvenile (curved carapace lengths: 28 and 30 cm) loggerhead sea turtles Caretta caretta with precocious male external characteristics were admitted to the ARCA del Mar rescue area at the Oceanogràfic Aquarium in Valencia, Spain, in 2009 and 2010. Routine internal laparoscopic examination and subsequent histopathology confirmed the presence of apparently healthy internal female gonads in both animals. Extensive tissue biopsy and hormone induction assays were consistent with female sex. To the best of our knowledge, this is the first report of pseudohermaphroditism in loggerhead sea turtles based on sexual external characteristics and internal laparoscopic examination. Our findings suggest that the practice of using external phenotypical characteristics as the basis for gender identification in sea turtles should be reevaluated. Future research should focus on detecting more animals with sexual defects and their possible effects on the sea turtle population.

Breeding loggerhead marine turtles Caretta caretta in Dry Tortugas National Park, USA, show high fidelity to diverse habitats near nesting beaches

USGS Publications Warehouse

Hart, Kristen M.; Zawada, David G.; Sartain-Iverson, Autumn R.; Fujisaki, Ikuko

2016-01-01

We used satellite telemetry to identify in-water habitat used by individuals in the smallest North-west Atlantic subpopulation of adult nesting loggerhead turtles Caretta caretta during the breeding season. During 2010, 2011 and 2012 breeding periods, a total of 20 adult females used habitats proximal to nesting beaches with various levels of protection within Dry Tortugas National Park. We then used a rapid, high-resolution, digital imaging system to map habitat adjacent to nesting beaches, revealing the diversity and distribution of available benthic cover. Turtle behaviour showing measurable site-fidelity to these diverse habitats has implications for managing protected areas and human activities within them. Protecting diverse benthic areas adjacent to loggerhead turtle nesting beaches here and elsewhere could provide benefits for overall biodiversity conservation.

Vessel Specific Levels

EPA Pesticide Factsheets

Marine debris degrades ocean habitats, endangers marine and coastal wildlife, causes navigation hazards, results in economic losses to industry and governments, and threatens human health and safety. EPA Pacific Southwest (Region 9) is tapping existing programs and resources to advance the prevention, reduction and clean-up of marine debris in the North Pacific Ocean. EPA Pacific Southwest activities build upon specific recommendations of the Interagency Marine Debris Coordinating Committee by targeting threats and sources of debris and responding to debris impacts. EPA is initiating a three-pronged effort to reduce sources of marine debris, prevent trash from entering the oceans, and assess the human and ecosystem impacts and potential for cleanup.

Return Vessels Special Reports

EPA Pesticide Factsheets

Marine debris degrades ocean habitats, endangers marine and coastal wildlife, causes navigation hazards, results in economic losses to industry and governments, and threatens human health and safety. EPA Pacific Southwest (Region 9) is tapping existing programs and resources to advance the prevention, reduction and clean-up of marine debris in the North Pacific Ocean. EPA Pacific Southwest activities build upon specific recommendations of the Interagency Marine Debris Coordinating Committee by targeting threats and sources of debris and responding to debris impacts. EPA is initiating a three-pronged effort to reduce sources of marine debris, prevent trash from entering the oceans, and assess the human and ecosystem impacts and potential for cleanup.

Roll Call Debris - Race

EPA Pesticide Factsheets

Marine debris degrades ocean habitats, endangers marine and coastal wildlife, causes navigation hazards, results in economic losses to industry and governments, and threatens human health and safety. EPA Pacific Southwest (Region 9) is tapping existing programs and resources to advance the prevention, reduction and clean-up of marine debris in the North Pacific Ocean. EPA Pacific Southwest activities build upon specific recommendations of the Interagency Marine Debris Coordinating Committee by targeting threats and sources of debris and responding to debris impacts. EPA is initiating a three-pronged effort to reduce sources of marine debris, prevent trash from entering the oceans, and assess the human and ecosystem impacts and potential for cleanup.

Return Vessel Specific Levels

EPA Pesticide Factsheets

Marine debris degrades ocean habitats, endangers marine and coastal wildlife, causes navigation hazards, results in economic losses to industry and governments, and threatens human health and safety. EPA Pacific Southwest (Region 9) is tapping existing programs and resources to advance the prevention, reduction and clean-up of marine debris in the North Pacific Ocean. EPA Pacific Southwest activities build upon specific recommendations of the Interagency Marine Debris Coordinating Committee by targeting threats and sources of debris and responding to debris impacts. EPA is initiating a three-pronged effort to reduce sources of marine debris, prevent trash from entering the oceans, and assess the human and ecosystem impacts and potential for cleanup.

Fleet Debris Levels

EPA Pesticide Factsheets

Marine debris degrades ocean habitats, endangers marine and coastal wildlife, causes navigation hazards, results in economic losses to industry and governments, and threatens human health and safety. EPA Pacific Southwest (Region 9) is tapping existing programs and resources to advance the prevention, reduction and clean-up of marine debris in the North Pacific Ocean. EPA Pacific Southwest activities build upon specific recommendations of the Interagency Marine Debris Coordinating Committee by targeting threats and sources of debris and responding to debris impacts. EPA is initiating a three-pronged effort to reduce sources of marine debris, prevent trash from entering the oceans, and assess the human and ecosystem impacts and potential for cleanup.

Special Report Debris - Race

EPA Pesticide Factsheets

Marine debris degrades ocean habitats, endangers marine and coastal wildlife, causes navigation hazards, results in economic losses to industry and governments, and threatens human health and safety. EPA Pacific Southwest (Region 9) is tapping existing programs and resources to advance the prevention, reduction and clean-up of marine debris in the North Pacific Ocean. EPA Pacific Southwest activities build upon specific recommendations of the Interagency Marine Debris Coordinating Committee by targeting threats and sources of debris and responding to debris impacts. EPA is initiating a three-pronged effort to reduce sources of marine debris, prevent trash from entering the oceans, and assess the human and ecosystem impacts and potential for cleanup.

S/V Family Affairs Obs

EPA Pesticide Factsheets

Marine debris degrades ocean habitats, endangers marine and coastal wildlife, causes navigation hazards, results in economic losses to industry and governments, and threatens human health and safety. EPA Pacific Southwest (Region 9) is tapping existing programs and resources to advance the prevention, reduction and clean-up of marine debris in the North Pacific Ocean. EPA Pacific Southwest activities build upon specific recommendations of the Interagency Marine Debris Coordinating Committee by targeting threats and sources of debris and responding to debris impacts. EPA is initiating a three-pronged effort to reduce sources of marine debris, prevent trash from entering the oceans, and assess the human and ecosystem impacts and potential for cleanup.

Family Affairs Obs - Return Voyage

EPA Pesticide Factsheets

Marine debris degrades ocean habitats, endangers marine and coastal wildlife, causes navigation hazards, results in economic losses to industry and governments, and threatens human health and safety. EPA Pacific Southwest (Region 9) is tapping existing programs and resources to advance the prevention, reduction and clean-up of marine debris in the North Pacific Ocean. EPA Pacific Southwest activities build upon specific recommendations of the Interagency Marine Debris Coordinating Committee by targeting threats and sources of debris and responding to debris impacts. EPA is initiating a three-pronged effort to reduce sources of marine debris, prevent trash from entering the oceans, and assess the human and ecosystem impacts and potential for cleanup.

Particle-induced X-ray emission analysis of elements in plasma from wild and captive sea turtles (Eretmochelys imbricata, Chelonia mydas, and Caretta caretta) in Okinawa, Japan.

PubMed

Suzuki, Kazuyuki; Noda, Jun; Yanagisawa, Makio; Kawazu, Isao; Sera, Kouichiro; Fukui, Daisuke; Asakawa, Mitsuhiko; Yokota, Hiroshi

2012-09-01

The aim of this study was to evaluate the reliability of direct determination of trace and major element concentrations in plasma samples from wild (six hawksbill, nine green, and nine loggerhead) and captive sea turtles (25 howksbill, five green, and three loggerhead) in Okinawa, Japan. The particle induced X-ray emission method allowed detection of 23 trace and major elements (Al, As, Br, Ca, Cl, Cr, Cu, Fe, Hg, K, Mg, Mn, Mo, Ni, P, Pb, S, Se, Si, Sr, Ti, Y, and Zn). The wild sea turtles were found to have high concentrations of As and Pb in plasma compared with captive, but there were no significant changes in the Al and Hg concentrations. Loggerhead sea turtles were found to have significantly higher accumulation of As and Pb in plasma in comparison to other species. These findings may be useful when adjusting environmental and species-related factors in severely polluted marine ecosystems. Our results indicate that measuring the plasma As and Pb concentrations in wild sea turtles might be of help to assess the level of pollution in marine ecosystems, keeping in mind that loggerhead sea turtles had been shown to have higher levels of As and Pb in plasma.

A pintail duck swims in the water at KSC

NASA Technical Reports Server (NTRS)

1999-01-01

A pintail duck swims calmly in the waters of the Merritt Island National Wildlife Refuge, which shares a boundary with the space center. The pintail can be found in marshes, prairie ponds and tundra, and salt marshes in winter. They range from Alaska and Greenland south to Central America and the West Indies. The open waters of the Wildlife Refuge provide wintering areas for 23 species of migratory waterfowl as well as a year-round home for great blue herons, great egrets, wood storks, cormorants, brown pelicans and other species of marsh and shore birds. The refuge comprises 92,000 acres, ranging from fresh-water impoundments, salt-water estuaries and brackish marshes to hardwood hammocks and pine flatwoods. The diverse landscape provides habitat for more than 310 species of birds, 25 mammals, 117 fishes, and 65 amphibians and reptiles, including such endangered species as Southern bald eagles, wood storks, Florida scrub jays, Atlantic loggerhead and leatherback turtles, osprey, and nearly 5,000 alligators.

Crude oil as a stranding cause among loggerhead sea turtles (Caretta caretta) in the Canary Islands, Spain (1998-2011).

PubMed

Camacho, María; Calabuig, Pascual; Luzardo, Octavio P; Boada, Luis D; Zumbado, Manuel; Orós, Jorge

2013-07-01

We report the number of strandings caused by crude oil among loggerhead turtles (Caretta caretta) in the Canary Islands between 1998 and 2011 and analyze the impact of the designation of the Canary Islands as a Particularly Sensitive Sea Area (PSSA) in 2005. Among 1,679 stranded loggerhead turtles, 52 turtles stranded due to crude oil (3.1%). The survival rate of the turtles stranded by crude oil was 88%. All turtles that died because of crude oil stranding had signs of ingestion of crude oil and lesions, included esophageal impaction, necrotizing gastroenteritis, necrotizing hepatitis, and tubulonephrosis. The number of strandings caused by crude oil after 2005 was significantly lower than it was before 2006. We show that the designation of the Canary Islands as a PSSA in 2005 by the International Maritime Organization was associated with a reduction of sea turtle strandings caused by crude oil.

Coplanar PCB distribution between chorioallantoic membranes and eggs of alligators and Loggerhead sea turtles

DOE Office of Scientific and Technical Information (OSTI.GOV)

Bargar, T.A.; Cobb, G.P.

1995-12-31

The relative distribution of coplanar polychlorinated biphenyls (PCBs) between chorioallantoic membranes (CAMS) and eggs was investigated in inviable American alligator (Alligator mississippiensis) and Loggerhead sea turtle (Caretta caretra) eggs. Cam and egg extracts were fractionated by HPLC using a porous graphitic column (PGC) and an in line switching valve to separate coplanar from non-coplanar PCBs. The fractions were collected, concentrated by nitrogen evaporation, and injected on GC-ECD (60M DB-5 capillary column) for quantification. Alligator and Loggerhead sea turtle eggs contain toxicologically significant coplanar PCBs. Mono-ortho substituted PCBs were present with greater frequency relative to non-ortho substituted PCBs in both eggsmore » and CAMS. The presence of coplanar PCBs in eggs appears to be correlated to coplanar PCB presence in CAMS. The chorioallantoic membrane could serve as a biomarker of embryo exposure to coplanar PCBs.« less

Trophic status drives interannual variability in nesting numbers of marine turtles.

PubMed

Broderick, A C; Godley, B J; Hays, G C

2001-07-22

Large annual fluctuations are seen in breeding numbers in many populations of non-annual breeders. We examined the interannual variation in nesting numbers of populations of green (Chelonia mydas) (n = 16 populations), loggerhead (Caretta caretta) (n = 10 populations), leatherback (Dermochelys coriacea) (n = 9 populations) and hawksbill turtles (Eretmochelys imbricata) (n = 10 populations). Interannual variation was greatest in the green turtle. When comparing green and loggerhead turtles nesting in Cyprus we found that green turtles were more likely to change the interval between laying seasons and showed greater variation in the number of clutches laid in a season. We suggest that these differences are driven by the varying trophic statuses of the different species. Green turtles are herbivorous, feeding on sea grasses and macro-algae, and this primary production will be more tightly coupled with prevailing environmental conditions than the carnivorous diet of the loggerhead turtle.

Predicting bycatch hotspots for endangered leatherback turtles on longlines in the Pacific Ocean.

PubMed

Roe, John H; Morreale, Stephen J; Paladino, Frank V; Shillinger, George L; Benson, Scott R; Eckert, Scott A; Bailey, Helen; Tomillo, Pilar Santidrián; Bograd, Steven J; Eguchi, Tomoharu; Dutton, Peter H; Seminoff, Jeffrey A; Block, Barbara A; Spotila, James R

2014-02-22

Fisheries bycatch is a critical source of mortality for rapidly declining populations of leatherback turtles, Dermochelys coriacea. We integrated use-intensity distributions for 135 satellite-tracked adult turtles with longline fishing effort to estimate predicted bycatch risk over space and time in the Pacific Ocean. Areas of predicted bycatch risk did not overlap for eastern and western Pacific nesting populations, warranting their consideration as distinct management units with respect to fisheries bycatch. For western Pacific nesting populations, we identified several areas of high risk in the north and central Pacific, but greatest risk was adjacent to primary nesting beaches in tropical seas of Indo-Pacific islands, largely confined to several exclusive economic zones under the jurisdiction of national authorities. For eastern Pacific nesting populations, we identified moderate risk associated with migrations to nesting beaches, but the greatest risk was in the South Pacific Gyre, a broad pelagic zone outside national waters where management is currently lacking and may prove difficult to implement. Efforts should focus on these predicted hotspots to develop more targeted management approaches to alleviate leatherback bycatch.

Predicting bycatch hotspots for endangered leatherback turtles on longlines in the Pacific Ocean

PubMed Central

Roe, John H.; Morreale, Stephen J.; Paladino, Frank V.; Shillinger, George L.; Benson, Scott R.; Eckert, Scott A.; Bailey, Helen; Tomillo, Pilar Santidrián; Bograd, Steven J.; Eguchi, Tomoharu; Dutton, Peter H.; Seminoff, Jeffrey A.; Block, Barbara A.; Spotila, James R.

2014-01-01

Fisheries bycatch is a critical source of mortality for rapidly declining populations of leatherback turtles, Dermochelys coriacea. We integrated use-intensity distributions for 135 satellite-tracked adult turtles with longline fishing effort to estimate predicted bycatch risk over space and time in the Pacific Ocean. Areas of predicted bycatch risk did not overlap for eastern and western Pacific nesting populations, warranting their consideration as distinct management units with respect to fisheries bycatch. For western Pacific nesting populations, we identified several areas of high risk in the north and central Pacific, but greatest risk was adjacent to primary nesting beaches in tropical seas of Indo-Pacific islands, largely confined to several exclusive economic zones under the jurisdiction of national authorities. For eastern Pacific nesting populations, we identified moderate risk associated with migrations to nesting beaches, but the greatest risk was in the South Pacific Gyre, a broad pelagic zone outside national waters where management is currently lacking and may prove difficult to implement. Efforts should focus on these predicted hotspots to develop more targeted management approaches to alleviate leatherback bycatch. PMID:24403331

DEVELOPMENT OF FIELD-BASED EMPIRICAL MODELS OF SUITABLE TEMPERATURE REGIMES FOR INTERIOR SALMONIDS

EPA Science Inventory

Interior salmonids are species of growing interest and concern in the Pacific Northwest. Evidence of population declines associated with habitat loss and fragmentation have culminate in every species being listed, or proposed or petitioned for listing under he Endangered Species...

75 FR 47538 - Endangered and Threatened Species; Recovery Plans

Federal Register 2010, 2011, 2012, 2013, 2014

2010-08-06

... physalus) populations to the point where they are again secure, self- sustaining members of their... in the Atlantic and Pacific Oceans and the Southern Hemisphere. Although most populations were... worldwide. Currently, the population structure of fin whales has not been adequately defined. Most models...

77 FR 73986 - Marine Mammals; Issuance of Permits

Federal Register 2010, 2011, 2012, 2013, 2014

2012-12-12

... distinct population segment; minke whale (Balaenoptera acutorostrata); and gray whale (Eschrichtius robustus), excluding the endangered Western North Pacific population. The LOC expires on May 31, 2017. File No. 17245: Issued to John H. Schacke, Ph.D., Georgia Dolphin Ecology Program, Commerce, GA on June 4...

77 FR 34349 - Endangered and Threatened Species; Take of Anadromous Fish

Federal Register 2010, 2011, 2012, 2013, 2014

2012-06-11

... and Threatened Species; Take of Anadromous Fish AGENCY: National Marine Fisheries Service (NMFS... Department of Fish and Wildlife (ODFW) pursuant to the protective regulations promulgated for Pacific salmon... hatchery fish to support fishing opportunities while minimizing potential risks to natural-origin spring...

Light pollution affects nesting behavior of loggerhead turtles and predation risk of nests and hatchlings.

PubMed

Silva, Elton; Marco, Adolfo; da Graça, Jesemine; Pérez, Héctor; Abella, Elena; Patino-Martinez, Juan; Martins, Samir; Almeida, Corrine

2017-08-01

The introduction of artificial light into wildlife habitats is a rapidly expanding aspect of global change, which has many negative impacts on a wide range of taxa. In this experimental study, which took place on a beach located on the island of Boa Vista (Cabo Verde), three types of artificial light were tested on nesting loggerhead sea turtles as well as on ghost crabs, which intensively predate on nests and hatchlings, to determine the effects they would produce on the behavior of both species. Over the course of 36days, female loggerheads and ghost crabs were studied under yellow, orange and red lights, with observations also being made on dark nights that served as a control treatment. During this period, the frequencies of nesting attempts, the time taken by turtles to complete each phase of the nesting process, and ghost crab abundance and behaviors were carefully recorded. 1146 loggerhead nesting attempts were observed and recorded during the experiments, and results showed a decrease in nesting attempts of at least 20% when artificial lighting was present. A significant decline in successful attempts was also observed within the central sections of the beach, which corresponded to those that received more light. This artificial lighting significantly increased the time that turtles spent on the nesting process and forced them to do more extensive beach crawls. Despite this, the presence of light had no apparent effect on the final selection of the nesting site. Yellow and orange lights significantly disrupted the sea finding behavior and turtles were often unable to orient themselves seaward under these color lights. Disoriented turtles were observed crawling in circuitous paths in front of the light source for several minutes. In addition, artificial lights had the potential to increase the number of ghost crabs present within the illuminated stretches of the beach. However, only yellow lighting produced a significant change on aggressive and prey searching behaviors. These changes in abundance and behavior could cause a greater predation on loggerhead turtle nests. Red light had no significant impact on the behavior of either species. It should be a priority to enforce preventive measures and light mitigation strategies to ensure the conservation of important loggerhead rookeries. Copyright © 2017 Elsevier B.V. All rights reserved.

San Francisco Bay Area Base Line Trash Loading (25001 - 50000 gal/yr)

EPA Pesticide Factsheets

Marine debris degrades ocean habitats, endangers marine and coastal wildlife, causes navigation hazards, results in economic losses to industry and governments, and threatens human health and safety. EPA Pacific Southwest (Region 9) is tapping existing programs and resources to advance the prevention, reduction and clean-up of marine debris in the North Pacific Ocean. EPA Pacific Southwest activities build upon specific recommendations of the Interagency Marine Debris Coordinating Committee by targeting threats and sources of debris and responding to debris impacts. EPA is initiating a three-pronged effort to reduce sources of marine debris, prevent trash from entering the oceans, and assess the human and ecosystem impacts and potential for cleanup.

San Francisco Bay Area Base Line Trash Loading (0-2500 gal/yr)

EPA Pesticide Factsheets

Marine debris degrades ocean habitats, endangers marine and coastal wildlife, causes navigation hazards, results in economic losses to industry and governments, and threatens human health and safety. EPA Pacific Southwest (Region 9) is tapping existing programs and resources to advance the prevention, reduction and clean-up of marine debris in the North Pacific Ocean. EPA Pacific Southwest activities build upon specific recommendations of the Interagency Marine Debris Coordinating Committee by targeting threats and sources of debris and responding to debris impacts. EPA is initiating a three-pronged effort to reduce sources of marine debris, prevent trash from entering the oceans, and assess the human and ecosystem impacts and potential for cleanup.

San Francisco Bay Area Base Line Trash Loading (2501 - 5000 gal/yr)

EPA Pesticide Factsheets

Marine debris degrades ocean habitats, endangers marine and coastal wildlife, causes navigation hazards, results in economic losses to industry and governments, and threatens human health and safety. EPA Pacific Southwest (Region 9) is tapping existing programs and resources to advance the prevention, reduction and clean-up of marine debris in the North Pacific Ocean. EPA Pacific Southwest activities build upon specific recommendations of the Interagency Marine Debris Coordinating Committee by targeting threats and sources of debris and responding to debris impacts. EPA is initiating a three-pronged effort to reduce sources of marine debris, prevent trash from entering the oceans, and assess the human and ecosystem impacts and potential for cleanup.

San Francisco Bay Area Base Line Trash Loading (5000 - 25000 gal/yr)

EPA Pesticide Factsheets

Marine debris degrades ocean habitats, endangers marine and coastal wildlife, causes navigation hazards, results in economic losses to industry and governments, and threatens human health and safety. EPA Pacific Southwest (Region 9) is tapping existing programs and resources to advance the prevention, reduction and clean-up of marine debris in the North Pacific Ocean. EPA Pacific Southwest activities build upon specific recommendations of the Interagency Marine Debris Coordinating Committee by targeting threats and sources of debris and responding to debris impacts. EPA is initiating a three-pronged effort to reduce sources of marine debris, prevent trash from entering the oceans, and assess the human and ecosystem impacts and potential for cleanup.

San Francisco Bay Area Base Line Trash Reduction - over 50,000 gal/yr

EPA Pesticide Factsheets

Marine debris degrades ocean habitats, endangers marine and coastal wildlife, causes navigation hazards, results in economic losses to industry and governments, and threatens human health and safety. EPA Pacific Southwest (Region 9) is tapping existing programs and resources to advance the prevention, reduction and clean-up of marine debris in the North Pacific Ocean. EPA Pacific Southwest activities build upon specific recommendations of the Interagency Marine Debris Coordinating Committee by targeting threats and sources of debris and responding to debris impacts. EPA is initiating a three-pronged effort to reduce sources of marine debris, prevent trash from entering the oceans, and assess the human and ecosystem impacts and potential for cleanup.

Life history and environmental requirements of loggerhead turtles

DOE Office of Scientific and Technical Information (OSTI.GOV)

Nelson, D.A.

1988-08-01

In the United States scattered nestings of loggerhead sea turtles (Caretta caretta) may occur in most of its range from Texas to Florida and Florida to New Jersey; however, nesting concentrations occur on coastal islands of North Carolina, South Carolina, and Georgia and on the coasts of Florida. The greatest portion of a loggerhead's life is spent in ocean and estuarine waters where it breeds in shallow waters adjacent to nesting beaches, feeds on a variety of fish and shellfish, and migrates generally north in the spring and summer and south in the fall and winter. The other part ofmore » its life is spent on coastal beaches where the female digs a nest, lays her eggs (average 120 eggs), the eggs hatch (in 46 to 65 days), and the hatchlings emerge from the nest as a group and orient seaward to become part of the aquatic system again. Nesting activity begins in the spring, peaks in midsummer, and declines until completion in late summer. A loggerhead female generally nests every other or every third year. Beach sand temperatures may affect nest site selection by females, the incubation time and hatching success of eggs, and the sex and emergence timing of hatchlings. Most management of sea turtles has been directed toward increasing hatching and hatchling success through predator control, egg relocation, and raising captive hatchlings. 183 refs.; 10 figs.; 3 tabs.« less

West Coast Region Home :: NOAA Fisheries West Coast Region

Science.gov Websites

Environmental Policy Act Pacific Coastal Salmon Recovery Fund Sovereign Relations Dolphin-safe Tuna Aquaculture -safe Tuna Sustainable Seafood Ecosystem-Based Management Hatcheries Resources Permits & . . . NOAA Fisheries researchers working to recover the critically endangered white abalone need to answer

Potential adverse health effects of persistent organic pollutants on sea turtles: evidences from a cross-sectional study on Cape Verde loggerhead sea turtles.

PubMed

Camacho, María; Luzardo, Octavio P; Boada, Luis D; López Jurado, Luis F; Medina, María; Zumbado, Manuel; Orós, Jorge

2013-08-01

The Cape Verde nesting population of loggerhead sea turtles (Caretta caretta) is the third largest population of this species in the world. For conservation purposes, it is essential to determine how these reptiles respond to different types of anthropogenic contaminants. We evaluated the presence of organochlorine pesticides (OCPs), polychlorinated biphenyls (PCBs), and polycyclic aromatic hydrocarbons (PAHs) in the plasma of adult nesting loggerheads from Boa Vista Island, Cape Verde, and studied the effects of the contaminants on the health status of the turtles using hematological and biochemical parameters. All turtles had detectable levels of non-dioxin like PCBs, whereas dioxin-like congeners (DL-PCBs) were detected in only 30% of the turtles. Packed cell volume decreased with higher concentrations of PCBs, which suggests that PCB exposure could result in anemia in sea turtles. In addition, a negative association between some OCPs and white blood cells (WBC) and thrombocyte estimate was noted. The DDT-metabolite, p,p'-DDE was negatively correlated with the Na/K ratio and, additionally, a number of correlations between certain PAHs and electrolyte balances were found, which suggest that exposure to these environmental contaminants could affect the kidneys and salt glands in sea turtles. Additionally, several correlations were observed between these environmental pollutants (OCPs and PAHs) and enzyme activity (GGT, ALT, ALP and amylase) and serum protein levels, pointing to the possibility that these contaminants could induce adverse metabolic effects in sea turtles. Our results indicate that anthropogenic pollutants are present in the Cape Verde loggerhead turtle nesting population and could exert negative effects on several health parameters. Because of the importance of this loggerhead nesting population, protective regulations at national and international levels as well as international action are necessary for assuring the conservation of this population. Copyright © 2013 Elsevier B.V. All rights reserved.

Effects of brevetoxin exposure on the immune system of loggerhead sea turtles.

PubMed

Walsh, Catherine J; Leggett, Stephanie R; Carter, Barbara J; Colle, Clarence

2010-05-10

Blooms of the toxic dinoflagellate, Karenia brevis, occur almost annually off the Florida coast. These blooms, commonly called "red tides", produce a group of neurotoxins collectively termed brevetoxins. Many species of sealife, including sea turtles, are severely impacted by brevetoxin exposure. Effects of brevetoxins on immune cells were investigated in rescued loggerhead sea turtles, Caretta caretta, as well as through in vitro experiments using peripheral blood leukocytes (PBL) collected from captive sea turtles. In rescued animals, plasma brevetoxin concentrations were measured using a competitive ELISA. Plasma lysozyme activity was measured using a turbidity assay. Lysozyme activity correlated positively with plasma brevetoxin concentrations. Differential expression of genes affected by brevetoxin exposure was determined using two separate suppression subtractive hybridization experiments. In one experiment, genes from PBL collected from sea turtles rescued from red tide toxin exposure were compared to genes from PBL collected from healthy captive loggerhead sea turtles. In the second experiment, PBL from healthy captive loggerhead sea turtles were exposed to brevetoxin (500 ng PbTx-2/ml) in vitro for 18 h and compared to unexposed PBL. Results from the subtraction hybridization experiment conducted with red tide rescued sea turtle PBL indicated that genes involved in oxidative stress or xenobiotic metabolism were up-regulated. Using quantitative real-time PCR, a greater than 2-fold increase in superoxide dismutase and thioredoxin and greater than 10-fold increase in expression of thiopurine S-methyltransferase were observed. Results from the in vitro subtraction hybridization experiment indicated that genes coding for cytochrome c oxidases were the major up-regulated genes. Using quantitative real-time PCR, a greater than 8-fold increase in expression of beta-tubulin and greater than 3-fold increase in expression of ubiquinol were observed. Brevetoxin exposure may have significant implications for immune function in loggerhead sea turtles. 2009 Elsevier B.V. All rights reserved.

50 CFR 665.20 - Western Pacific Community Development Program.

Code of Federal Regulations, 2010 CFR

2010-10-01

... impacts on target and non-target stocks, marine mammals, and threatened or endangered species. (3) Within... applicable provision of this part, the Magnuson-Stevens Act, or other applicable laws. (i) Program review... direct or incidental harvest of management unit species that would otherwise be prohibited by this part...

76 FR 34967 - Endangered Species; File No. 10027

Federal Register 2010, 2011, 2012, 2013, 2014

2011-06-15

...-226). The permit currently authorizes the permit holder to study the population biology and... distribution and abundance, ecology, health, and threats to sea turtles at the Palmyra Atoll in the Pacific... the population of sea turtles at Palmyra. The modified permit would expire July 31, 2013. Dated: June...

Human influence on the spatial structure of threatened Pacific salmon metapopulations

Treesearch

Aimee H. Fullerton; Steven T. Lindley; George R. Pess; Blake E. Feist; E. Ashley Steel; Paul McElhany

2011-01-01

To remain viable, populations must be resilient to both natural and human-caused environmental changes. We evaluated anthropogenic effects on spatial connections among populations of Chinook salmon (Oncorhynchus tshawytscha) and steelhead (O. mykiss) (designated as threatened under the U.S. Endangered Species Act) in the lower...

First application of comet assay in blood cells of Mediterranean loggerhead sea turtle (Caretta caretta).

PubMed

Caliani, Ilaria; Campani, Tommaso; Giannetti, Matteo; Marsili, Letizia; Casini, Silvia; Fossi, Maria Cristina

2014-05-01

The aim of this study was to validate the comet assay in erythrocytes of Caretta caretta, a species never investigated for genotoxicity. We studied 31 loggerhead sea turtles from three Italian marine rescue centres. Peripheral blood samples were collected from all the animals and the comet assay applied. All comet cells were analysed using two methods: visual scoring and computer image analysis. The % DNA in tail mean value ± SD and Damage Index were 21.56 ± 15.41 and 134.83 ± 94.12, respectively. A strong and statistically significant statistically correlation between the two analytical methods was observed (r = 0.95; p < 0.05). These results demonstrate that the comet assay is a useful method to detect the possible effects of genotoxic agents in loggerhead sea turtle and to increase the knowledge about the ecotoxicological health status of this threatened species. Copyright © 2013 Elsevier Ltd. All rights reserved.

Impacts of plastic ingestion on post-hatchling loggerhead turtles off South Africa.

PubMed

Ryan, Peter G; Cole, Georgina; Spiby, Kevin; Nel, Ronel; Osborne, Alexis; Perold, Vonica

2016-06-15

Twenty-four of 40 (60%) loggerhead turtle Caretta caretta post-hatchlings (carapace<9cm) that died within 2months of stranding on southern Cape beaches in April 2015 contained ingested anthropogenic debris. Plastic comprised of 99% of debris: 77% hard plastic fragments, 10% flexible packaging and 8% fibres; industrial pellets comprised only 3%, compared to ~70% in 1968-1973, when 12% of stranded post-hatchlings contained plastics. Turtles selected for white (38%) and blue (19%) items, but translucent items (23%) were under-represented compared to beach mesodebris. Ingested loads did not decrease up to 52days in captivity, indicating long retention times. Plastic killed 11 turtles by blocking their digestive tracts or bladders, and contributed to the deaths of five other turtles. Our results indicate that the amount and diversity of plastic ingested by post-hatchling loggerhead turtles off South Africa have increased over the last four decades, and now kill some turtles. Copyright © 2016 Elsevier Ltd. All rights reserved.

First satellite tracks of neonate sea turtles redefine the ‘lost years’ oceanic niche

PubMed Central

Mansfield, Katherine L.; Wyneken, Jeanette; Porter, Warren P.; Luo, Jiangang

2014-01-01

Few at-sea behavioural data exist for oceanic-stage neonate sea turtles, a life-stage commonly referred to as the sea turtle ‘lost years’. Historically, the long-term tracking of small, fast-growing organisms in the open ocean was logistically or technologically impossible. Here, we provide the first long-term satellite tracks of neonate sea turtles. Loggerheads (Caretta caretta) were remotely tracked in the Atlantic Ocean using small solar-powered satellite transmitters. We show that oceanic-stage turtles (i) rarely travel in Continental Shelf waters, (ii) frequently depart the currents associated with the North Atlantic Subtropical Gyre, (iii) travel quickly when in Gyre currents, and (iv) select sea surface habitats that are likely to provide a thermal benefit or refuge to young sea turtles, supporting growth, foraging and survival. Our satellite tracks help define Atlantic loggerhead nursery grounds and early loggerhead habitat use, allowing us to re-examine sea turtle ‘lost years’ paradigms. PMID:24598420

Effects of attitudes and demography on public support for endangered species conservation.

PubMed

Liordos, Vasilios; Kontsiotis, Vasileios J; Anastasiadou, Magdalini; Karavasias, Efstathios

2017-10-01

It is critical for managers to understand how attitudes and demography affect public's preferences for species protection for designing successful conservation projects. 1080 adults in Greece were asked to rate pictures of 12 endangered species on aesthetic and negativistic attitudes, and intention to support their conservation. Factor analysis identified a group of animals for which respondents indicated high levels of support for their conservation (red deer, loggerhead sea turtle, brown bear, common pheasant, European ground squirrel, glossy ibis) and a group of animals for which respondents indicated low levels of support (black vulture, great white shark, fire-bellied toad, western barbastelle, Cretan tube web spider, Milos viper). The species that received the highest support were also rated as the most attractive and safest, excluding the fearsome brown bear. Structural models revealed that aesthetic, moralistic and negativistic attitudes were the stronger predictors of support. Aesthetic and moralistic attitudes were positively, and negativistic attitudes negatively, correlated with support for conservation in both groups. Consumptive users scored lower in aesthetics and were less supportive of protection in the high support group, while nonconsumptive users showed the opposite trend. Respondents residing in urban areas deemed animals of high support more attractive and less fearsome and were more supportive of conservation than rural residents in both groups. Females of higher education viewed animals of low support as fearsome, however they supported their conservation. Our study identified popular species that can be used as flagship species to facilitate the implementation of conservation projects. The results of this study could also be used to design a communication and outreach campaign to raise awareness about the ecosystem value of less attractive species. Copyright © 2017 Elsevier B.V. All rights reserved.

Translocation of Endangered Laysan Ducks to Midway Atoll National Wildlife Refuge (2004-5)

USGS Publications Warehouse

Reynolds, Michelle

2005-01-01

BACKGROUND Island ecosystems throughout the Pacific have undergone catastrophic species loss, largely due to the effects of alien or non-native species. Rats, in particular, pose significant threats to native species. In Hawai`i, the appearance of rats (which are not native to Hawai`i) in the subfossil record coincides with the disappearance of ground nesting birds. Sadly, only three of Hawai`i?s 10 endemic waterfowl species still exist today. The Laysan Duck (Anas laysanensis), also known as the Laysan Teal, is a critically endangered dabbling duck that is restricted to a single population on the remote and rat-free Laysan Island (Fig. 1). The Laysan Duck was listed as an endangered species in 1966 because of its small population, limited distribution, and dependence on a fragile island ecosystem. The same threats identified in 1966 continue to plague the species today.

76 FR 50448 - Endangered and Threatened Species; 5-Year Reviews for 17 Evolutionarily Significant Units and...

Federal Register 2010, 2011, 2012, 2013, 2014

2011-08-15

... 11 evolutionarily significant units (ESUs) of Pacific salmon (Oncorhynchus sp.) and 6 distinct... and 6 DPSs of steelhead in Oregon, Washington, and Idaho shall remain listed as determined in 2005... Sound Chinook salmon; (4) Lower Columbia River Chinook salmon; (5) Upper Willamette Chinook salmon; (6...

Development of a Willingness to Pay Survey for Willamette Basin Spring Chinook and Winter Steelhead Recovery

EPA Science Inventory

Salmon fisheries are a high-profile icon of the Pacific Northwest. Spring Chinook and winter-run steelhead are both listed as federally endangered species in the Willamette basin, the most populated and developed watershed in Oregon. Despite being a high profile issue, there are ...

Evaluation of Wetland Hydrology in Formerly Irrigated Areas

DTIC Science & Technology

2017-07-01

Laboratory 1987). The USACE requires defensible documentation identifying the presence or absence of wetland conditions when agricultural lands...irrigated agricultural areas (USACE 2008). In 2012, the USACE South Pacific Division (SPD) developed guidelines encouraging landowners to...geographic range; regulatory status; creation in agricultural landscapes; wildlife habitat; threatened and endangered species; water quality; hydrology

Pacific Islands Regional Office — National Marine Fisheries Service -

Science.gov Websites

Regulation Summaries Annual Catch Limits Sea Turtle Interactions Seabird Interactions Seabird Guide Whales and Dolphins Sea Turtles Species of Concern Corals Laws/Policies/Guidelines Endangered Species Act ? Report Marine Animals State-Wide Hotline 888-256-9840 Report sea turtle, monk seal, dolphin and whales

77 FR 23209 - Endangered and Threatened Species; Proposed Delisting of Eastern DPS of Steller Sea Lions

Federal Register 2010, 2011, 2012, 2013, 2014

2012-04-18

... five potential sources of threat under this factor: 1. Global Climate Warming and Ocean Acidification... 5. Oil and Gas Development. Global climate warming and ocean acidification pose a potential threat... information suggests it is likely that global warming and ocean acidification may affect eastern North Pacific...

76 FR 50447 - Endangered and Threatened Species; 5-Year Reviews for 5 Evolutionarily Significant Units of...

Federal Register 2010, 2011, 2012, 2013, 2014

2011-08-15

... southward extension of boundaries for California Coastal Chinook salmon and Central California Coast coho... reviews for listed Pacific salmon ESUs and steelhead DPSs in California, Oregon, Washington, and Idaho (75... for: (1) Southern Oregon/Northern California coho salmon; (2) California Coastal Chinook salmon; (3...

76 FR 15932 - Endangered and Threatened Species; Proposed Listing of Nine Distinct Population Segments of...

Federal Register 2010, 2011, 2012, 2013, 2014

2011-03-22

... Center for Biological Diversity and Turtle Island Restoration Network to list the ``North Pacific... petitioners (Center for Biological Diversity, Turtle Island Restoration Network, and Oceana) sent a 60-day... received a petition from Center for Biological Diversity and Oceana to list the ``Western North Atlantic...

78 FR 53391 - Endangered and Threatened Wildlife; 90-Day Finding on a Petition To Delist the North Pacific...

Federal Register 2010, 2011, 2012, 2013, 2014

2013-08-29

... a determination that a petitioned action may be warranted. As a general matter, these decisions hold... flippers, distinct ventral fluke patterning, dark dorsal coloration, a highly varied acoustic call (termed... lateral pigmentation (Rosenbaum et al., 1995). There are significantly more dark-colored flukes in the...

Metabarcoding of Fecal Samples to Determine Herbivore Diets: A Case Study of the Endangered Pacific Pocket Mouse

PubMed Central

Adams, Cynthia R.; Kohn, Joshua R.; Fisher, Robert N.; Brehme, Cheryl S.

2016-01-01

Understanding the diet of an endangered species illuminates the animal’s ecology, habitat requirements, and conservation needs. However, direct observation of diet can be difficult, particularly for small, nocturnal animals such as the Pacific pocket mouse (Heteromyidae: Perognathus longimembris pacificus). Very little is known of the dietary habits of this federally endangered rodent, hindering management and restoration efforts. We used a metabarcoding approach to identify source plants in fecal samples (N = 52) from the three remaining populations known. The internal transcribed spacers (ITS) of the nuclear ribosomal loci were sequenced following the Illumina MiSeq amplicon strategy and processed reads were mapped to reference databases. We evaluated a range of threshold mapping criteria and found the best-performing setting generally recovered two distinct mock communities in proportions similar to expectation. We tested our method on captive animals fed a known diet and recovered almost all plant sources, but found substantial heterogeneity among fecal pellets collected from the same individual at the same time. Observed richness did not increase with pooling of pellets from the same individual. In field-collected samples, we identified 4–14 plant genera in individual samples and 74 genera overall, but over 50 percent of reads mapped to just six species in five genera. We simulated the effects of sequencing error, variable read length, and chimera formation to infer taxon-specific rates of misassignment for the local flora, which were generally low with some exceptions. Richness at the species and genus levels did not reach a clear asymptote, suggesting that diet breadth remained underestimated in the current pool of samples. Large numbers of scat samples are therefore needed to make inferences about diet and resource selection in future studies of the Pacific pocket mouse. We conclude that our minimally invasive method is promising for determining herbivore diets given a library of sequences from local plants. PMID:27851756

Metabarcoding of Fecal Samples to Determine Herbivore Diets: A Case Study of the Endangered Pacific Pocket Mouse.

PubMed

Iwanowicz, Deborah D; Vandergast, Amy G; Cornman, Robert S; Adams, Cynthia R; Kohn, Joshua R; Fisher, Robert N; Brehme, Cheryl S

2016-01-01

Understanding the diet of an endangered species illuminates the animal's ecology, habitat requirements, and conservation needs. However, direct observation of diet can be difficult, particularly for small, nocturnal animals such as the Pacific pocket mouse (Heteromyidae: Perognathus longimembris pacificus). Very little is known of the dietary habits of this federally endangered rodent, hindering management and restoration efforts. We used a metabarcoding approach to identify source plants in fecal samples (N = 52) from the three remaining populations known. The internal transcribed spacers (ITS) of the nuclear ribosomal loci were sequenced following the Illumina MiSeq amplicon strategy and processed reads were mapped to reference databases. We evaluated a range of threshold mapping criteria and found the best-performing setting generally recovered two distinct mock communities in proportions similar to expectation. We tested our method on captive animals fed a known diet and recovered almost all plant sources, but found substantial heterogeneity among fecal pellets collected from the same individual at the same time. Observed richness did not increase with pooling of pellets from the same individual. In field-collected samples, we identified 4-14 plant genera in individual samples and 74 genera overall, but over 50 percent of reads mapped to just six species in five genera. We simulated the effects of sequencing error, variable read length, and chimera formation to infer taxon-specific rates of misassignment for the local flora, which were generally low with some exceptions. Richness at the species and genus levels did not reach a clear asymptote, suggesting that diet breadth remained underestimated in the current pool of samples. Large numbers of scat samples are therefore needed to make inferences about diet and resource selection in future studies of the Pacific pocket mouse. We conclude that our minimally invasive method is promising for determining herbivore diets given a library of sequences from local plants.

Metabarcoding of fecal samples to determine herbivore diets: A case study of the endangered Pacific pocket mouse

USGS Publications Warehouse

Iwanowicz, Deborah; Vandergast, Amy; Cornman, Robert S.; Adams, Cynthia; Kohn, Joshua R.; Fisher, Robert N.; Brehme, Cheryl S.

2016-01-01

Understanding the diet of an endangered species illuminates the animal’s ecology, habitat requirements, and conservation needs. However, direct observation of diet can be difficult, particularly for small, nocturnal animals such as the Pacific pocket mouse (Heteromyidae: Perognathus longimembris pacificus). Very little is known of the dietary habits of this federally endangered rodent, hindering management and restoration efforts. We used a metabarcoding approach to identify source plants in fecal samples (N = 52) from the three remaining populations known. The internal transcribed spacers (ITS) of the nuclear ribosomal loci were sequenced following the Illumina MiSeq amplicon strategy and processed reads were mapped to reference databases. We evaluated a range of threshold mapping criteria and found the best-performing setting generally recovered two distinct mock communities in proportions similar to expectation. We tested our method on captive animals fed a known diet and recovered almost all plant sources, but found substantial heterogeneity among fecal pellets collected from the same individual at the same time. Observed richness did not increase with pooling of pellets from the same individual. In field-collected samples, we identified 4–14 plant genera in individual samples and 74 genera overall, but over 50 percent of reads mapped to just six species in five genera. We simulated the effects of sequencing error, variable read length, and chimera formation to infer taxon-specific rates of misassignment for the local flora, which were generally low with some exceptions. Richness at the species and genus levels did not reach a clear asymptote, suggesting that diet breadth remained underestimated in the current pool of samples. Large numbers of scat samples are therefore needed to make inferences about diet and resource selection in future studies of the Pacific pocket mouse. We conclude that our minimally invasive method is promising for determining herbivore diets given a library of sequences from local plants.

Baseline plasma corticosterone, haematological and biochemical results in nesting and rehabilitating loggerhead sea turtles (Caretta caretta).

PubMed

Flower, Jennifer E; Norton, Terry M; Andrews, Kimberly M; Nelson, Steven E; Parker, Clare E; Romero, L Michael; Mitchell, Mark A

2015-01-01

The evaluation of hormonal responses to stress in reptiles relies on acquisition of baseline corticosterone concentrations; however, the stress associated with the restraint needed to collect the blood samples can affect the results. The purpose of this study was to determine a time limit for the collection of blood samples to evaluate baseline corticosterone, haematological and biochemical results in nesting (n = 11) and rehabilitating (n = 16) loggerhead sea turtles (Caretta caretta). Blood samples were collected from the dorsal cervical sinus of each turtle immediately after touching the animal (t 0; 0-3 min) and 3 (t 3; 3-6 min), 6 (t 6; 6-9 min; nesting turtles only), 10 (t 10; 10-13 min) and 30 min (t 30; rehabilitating turtles only) after the initial hands-on time. Consistent between the rehabilitating and nesting turtles, there was a subtle yet significant increase in white blood cell counts over time. Despite the fact that white blood cell counts increased during the sampling period, there was no direct correlation between white blood cell count and corticosterone in the sampled turtles. In the nesting turtles, significant elevations in corticosterone were noted between t 0 and t 3 (P = 0.014) and between t 0 and t 6 (P = 0.022). Values at t 10 were not significantly different from those at t 0 (P = 0.102); however, there was a trend for the corticosterone values to continue to increase. These results suggest that sampling of nesting loggerhead sea turtles within 3 min of handling will provide baseline corticosterone concentrations in their natural environment. Significant elevations in corticosterone were also noted in the rehabilitating loggerhead sea turtles between t 0 and t 10 (P = 0.02) and between t 0 and t 30 of sampling (P = 0.0001). These results suggest that sampling of loggerhead sea turtles within 6 min of handling should provide baseline corticosterone concentrations in a rehabilitation setting. The delay in the corticosterone response noted in the rehabilitating turtles may be associated with the daily contact (visual or direct) they have with their human caretakers.

Vulnerability of larval lamprey to Columbia River hydropower system operations—effects of dewatering on larval lamprey movements and survival

USGS Publications Warehouse

Liedtke, Theresa L.; Weiland, Lisa K.; Mesa, Matthew G.

2015-08-27

Numbers of adult and juvenile Pacific lamprey ( Entosphenus tridentatus ) in the upper Columbia River Basin of the interior Pacific Northwest have decreased from historical levels (Close and others, 2002), raising concerns f rom State and Federal agencies and Tribal entities. In 1994, the U.S. Fish and Wildlife Service designated Pacific lamprey as a Category 2 candidate species and in 2003, the species was petitioned for listing under the Endangered Species Act. Listing consideration and potential recovery planning are significantly hindered by a lack of information on the basic biology and ecology of lampreys, including limiting factors. To date (2015), several factors that may limit lamprey production require study, including dam passage issues, contaminants, and effects on habitat.

Helminth component community of the loggerhead sea turtle, Caretta caretta, from Madeira Archipelago, Portugal.

PubMed

Valente, Ana Luisa; Delgado, Cláudia; Moreira, Cláudia; Ferreira, Sandra; Dellinger, Thomas; Pinheiro de Carvalho, Miguel A A; Costa, Graça

2009-02-01

The helminth fauna of pelagic-stage loggerhead sea turtles, Caretta caretta, is still poorly known. Here, we describe the helminth-component community of healthy, free-ranging juvenile loggerhead sea turtles captured in the waters around Madeira Island, Portugal. Fifty-seven were used in this study. The esophagus, stomach, intestine, liver, gallbladder, spleen, kidneys, trachea, bronchi, urinary bladder, heart, left and right aortas, and coelomic cavity were macroscopically inspected; organs and tissues were removed and washed through a sieve. A search for parasites was made using a stereoscopic microscope; recovered parasites were fixed and stored in 70% alcohol until staining and identification. Prevalence, mean intensity, and mean abundance values were recorded. In total, 156 parasite specimens belonging to 9 species were found: nematodes included Anisakis simplex s.l. (larvae) and an unidentified species; digenetic trematodes present were Enodiotrema megachondrus, Rhytidodes gelatinosus, Pyelosomum renicapite, and Calycodes anthos; acanthocephalans included Bolbosoma vasculosum and Rhadinorhynchus pristis; a single cestode, Nybelinia sp., was present. Parasite infections were found to have both low prevalences and intensities. Possible reasons for this include the oligotrophic conditions of the pelagic habitat around Madeira; a 'dilution effect' because of the vastness of the area; and the small size, and thus ingestion rate, of the turtles. Results are discussed in terms of the various turtle populations that may use the waters surrounding Madeira. This work provides valuable information on the parasite fauna of a poorly known stage in the life of loggerhead sea turtles, thereby filling a fundamental gap with regard to features of the parasite fauna in this species.

Simulating transoceanic migrations of young loggerhead sea turtles: merging magnetic navigation behavior with an ocean circulation model.

PubMed

Putman, Nathan F; Verley, Philippe; Shay, Thomas J; Lohmann, Kenneth J

2012-06-01

Young loggerhead sea turtles (Caretta caretta) from eastern Florida, USA, undertake a transoceanic migration in which they gradually circle the Sargasso Sea before returning to the North American coast. Loggerheads possess a 'magnetic map' in which regional magnetic fields elicit changes in swimming direction along the migratory pathway. In some geographic areas, however, ocean currents move more rapidly than young turtles can swim. Thus, the degree to which turtles can control their migratory movements has remained unclear. In this study, the movements of young turtles were simulated within a high-resolution ocean circulation model using several different behavioral scenarios, including one in which turtles drifted passively and others in which turtles swam briefly in accordance with experimentally derived data on magnetic navigation. Results revealed that small amounts of oriented swimming in response to regional magnetic fields profoundly affected migratory routes and endpoints. Turtles that engaged in directed swimming for as little as 1-3 h per day were 43-187% more likely than passive drifters to reach the Azores, a productive foraging area frequented by Florida loggerheads. They were also more likely to remain within warm-water currents favorable for growth and survival, avoid areas on the perimeter of the migratory route where predation risk and thermal conditions pose threats, and successfully return to the open-sea migratory route if carried into coastal areas. These findings imply that even weakly swimming marine animals may be able to exert strong effects on their migratory trajectories and open-sea distributions through simple navigation responses and minimal swimming.

Temporal, spatial, and body size effects on growth rates of loggerhead sea turtles (Caretta caretta) in the Northwest Atlantic

USGS Publications Warehouse

Bjorndal, Karen A.; Schroeder, Barbara A.; Foley, Allen M.; Witherington, Blair E.; Bresette, Michael; Clark, David; Herren, Richard M.; Arendt, Michael D.; Schmid, Jeffrey R.; Meylan, Anne B.; Meylan, Peter A.; Provancha, Jane A.; Hart, Kristen M.; Lamont, Margaret M.; Carthy, Raymond R.; Bolten, Alan B.

2013-01-01

In response to a call from the US National Research Council for research programs to combine their data to improve sea turtle population assessments, we analyzed somatic growth data for Northwest Atlantic (NWA) loggerhead sea turtles (Caretta caretta) from 10 research programs. We assessed growth dynamics over wide ranges of geography (9–33°N latitude), time (1978–2012), and body size (35.4–103.3 cm carapace length). Generalized additive models revealed significant spatial and temporal variation in growth rates and a significant decline in growth rates with increasing body size. Growth was more rapid in waters south of the USA (<24°N) than in USA waters. Growth dynamics in southern waters in the NWA need more study because sample size was small. Within USA waters, the significant spatial effect in growth rates of immature loggerheads did not exhibit a consistent latitudinal trend. Growth rates declined significantly from 1997 through 2007 and then leveled off or increased. During this same interval, annual nest counts in Florida declined by 43 % (Witherington et al. in Ecol Appl 19:30–54, 2009) before rebounding. Whether these simultaneous declines reflect responses in productivity to a common environmental change should be explored to determine whether somatic growth rates can help interpret population trends based on annual counts of nests or nesting females. Because of the significant spatial and temporal variation in growth rates, population models of NWA loggerheads should avoid employing growth data from restricted spatial or temporal coverage to calculate demographic metrics such as age at sexual maturity.

Fishery gear interactions from stranded bottlenose dolphins, Florida manatees and sea turtles in Florida, U.S.A.

PubMed

Adimey, Nicole M; Hudak, Christine A; Powell, Jessica R; Bassos-Hull, Kim; Foley, Allen; Farmer, Nicholas A; White, Linda; Minch, Karrie

2014-04-15

Documenting the extent of fishery gear interactions is critical to wildlife conservation efforts, especially for reducing entanglements and ingestion. This study summarizes fishery gear interactions involving common bottlenose dolphins (Tursiops truncatus truncatus), Florida manatees (Trichechus manatus latirostris) and sea turtles: loggerhead (Caretta caretta), green turtle (Chelonia mydas), leatherback (Dermochelys coriacea), hawksbill (Eretmochelys imbricata), Kemp's ridley (Lepidochelys kempii), and olive ridley (Lepidochelys olivacea) stranding in Florida waters during 1997-2009. Fishery gear interactions for all species combined were 75.3% hook and line, 18.2% trap pot gear, 4.8% fishing nets, and 1.7% in multiple gears. Total reported fishery gear cases increased over time for dolphins (p<0.05), manatees (p<0.01), loggerheads (p<0.05) and green sea turtles (p<0.05). The proportion of net interaction strandings relative to total strandings for loggerhead sea turtles increased (p<0.05). Additionally, life stage and sex patterns were examined, fishery gear interaction hotspots were identified and generalized linear regression modeling was conducted. Published by Elsevier Ltd.

Antibiotic Resistance of Gram Negatives isolates from loggerhead sea turtles (Caretta caretta) in the central Mediterranean Sea.

PubMed

Foti, M; Giacopello, C; Bottari, Teresa; Fisichella, V; Rinaldo, D; Mammina, C

2009-09-01

Previous studies on fish and marine mammals support the hypothesis that marine species harbor antibiotic resistance and therefore may serve as reservoirs for antibiotic-resistance genetic determinants. The aim of this study was to assess the resistance to antimicrobial agents of Gram negative strains isolated from loggerhead sea turtles (Carettacaretta). Oral and cloacal swabs from 19 live-stranded loggerhead sea turtles, with hooks fixed into the gut, were analyzed. The antimicrobial resistance of the isolates to 31 antibiotics was assessed using the disk-diffusion method. Conventional biochemical tests identified Citrobacter spp., Proteus spp., Enterobacter spp., Escherichia spp., Providencia spp., Morganella spp., Pantoea spp., Pseudomonas spp. and Shewanella spp. Highest prevalences of resistance was detected to carbenicillin (100%), cephalothin (92.6%), oxytetracycline (81.3%) and amoxicillin (77.8%). The isolates showing resistance to the widest range of antibiotics were identified as Citrobacterfreundii, Proteusvulgaris, Providenciarettgeri and Pseudomonasaeruginosa. In this study, antibiotic resistant bacteria reflect marine contamination by polluted effluents and C.caretta is considered a bioindicator which can be used as a monitor for pollution.

Productivity and breeding habitat of loggerhead shrikes in a southwestern urban environment

USGS Publications Warehouse

Boal, C.W.; Estabrook, T.S.; Duerr, A.E.

2003-01-01

Declines in loggerhead shrike (Lanius ludovicianus) populations have been associated in part with habitat loss and degradation, including that resulting from urbanization. We monitored the productivity and examined nesting habitat of loggerhead shrikes nesting in an urban environment in Tucson, Arizona. We located 22 breeding pairs in 1997 and 26 breeding pairs in 1998, with a 72% breeding area reoccupancy between years. Mean fledgling numbers were 2.28/ nesting attempt and 3.11/successful nest. Although some pairs initially failed and renested, 91% and 73% of shrike pairs successfully fledged young in 1997 and 1998, respectively. Mayfield estimates of nesting success were 78% in 1997 and 65% in 1998. Nest sites were characterized by more trees >3 m in height, taller nest trees than those randomly available, and a greater proportion of bare ground surface than at random sites. Shrike breeding territories had lower proportions of residential and commercial development and greater proportions of open areas with low-growing vegetation than randomly available. Some shrikes nested in school playgrounds, residential front yards, and parking lots, if adjacent open space was available.

Stable Isotope Tracking of Endangered Sea Turtles: Validation with Satellite Telemetry and δ15N Analysis of Amino Acids

PubMed Central

Seminoff, Jeffrey A.; Benson, Scott R.; Arthur, Karen E.; Eguchi, Tomoharu; Dutton, Peter H.; Tapilatu, Ricardo F.; Popp, Brian N.

2012-01-01

Effective conservation strategies for highly migratory species must incorporate information about long-distance movements and locations of high-use foraging areas. However, the inherent challenges of directly monitoring these factors call for creative research approaches and innovative application of existing tools. Highly migratory marine species, such as marine turtles, regularly travel hundreds or thousands of kilometers between breeding and feeding areas, but identification of migratory routes and habitat use patterns remains elusive. Here we use satellite telemetry in combination with compound-specific isotope analysis of amino acids to confirm that insights from bulk tissue stable isotope analysis can reveal divergent migratory strategies and within-population segregation of foraging groups of critically endangered leatherback sea turtles (Dermochelys coriacea) across the Pacific Ocean. Among the 78 turtles studied, we found a distinct dichotomy in δ15N values of bulk skin, with distinct “low δ15N” and “high δ15N” groups. δ15N analysis of amino acids confirmed that this disparity resulted from isotopic differences at the base of the food chain and not from differences in trophic position between the two groups. Satellite tracking of 13 individuals indicated that their bulk skin δ15N value was linked to the particular foraging region of each turtle. These findings confirm that prevailing marine isoscapes of foraging areas can be reflected in the isotopic compositions of marine turtle body tissues sampled at nesting beaches. We use a Bayesian mixture model to show that between 82 and 100% of the 78 skin-sampled turtles could be assigned with confidence to either the eastern Pacific or western Pacific, with 33 to 66% of all turtles foraging in the eastern Pacific. Our forensic approach validates the use of stable isotopes to depict leatherback turtle movements over broad spatial ranges and is timely for establishing wise conservation efforts in light of this species’ imminent risk of extinction in the Pacific. PMID:22666354

Stable isotope tracking of endangered sea turtles: validation with satellite telemetry and δ15N analysis of amino acids.

PubMed

Seminoff, Jeffrey A; Benson, Scott R; Arthur, Karen E; Eguchi, Tomoharu; Dutton, Peter H; Tapilatu, Ricardo F; Popp, Brian N

2012-01-01

Effective conservation strategies for highly migratory species must incorporate information about long-distance movements and locations of high-use foraging areas. However, the inherent challenges of directly monitoring these factors call for creative research approaches and innovative application of existing tools. Highly migratory marine species, such as marine turtles, regularly travel hundreds or thousands of kilometers between breeding and feeding areas, but identification of migratory routes and habitat use patterns remains elusive. Here we use satellite telemetry in combination with compound-specific isotope analysis of amino acids to confirm that insights from bulk tissue stable isotope analysis can reveal divergent migratory strategies and within-population segregation of foraging groups of critically endangered leatherback sea turtles (Dermochelys coriacea) across the Pacific Ocean. Among the 78 turtles studied, we found a distinct dichotomy in δ(15)N values of bulk skin, with distinct "low δ(15)N" and "high δ(15)N" groups. δ(15)N analysis of amino acids confirmed that this disparity resulted from isotopic differences at the base of the food chain and not from differences in trophic position between the two groups. Satellite tracking of 13 individuals indicated that their bulk skin δ(15)N value was linked to the particular foraging region of each turtle. These findings confirm that prevailing marine isoscapes of foraging areas can be reflected in the isotopic compositions of marine turtle body tissues sampled at nesting beaches. We use a Bayesian mixture model to show that between 82 and 100% of the 78 skin-sampled turtles could be assigned with confidence to either the eastern Pacific or western Pacific, with 33 to 66% of all turtles foraging in the eastern Pacific. Our forensic approach validates the use of stable isotopes to depict leatherback turtle movements over broad spatial ranges and is timely for establishing wise conservation efforts in light of this species' imminent risk of extinction in the Pacific.

Predicting the potential for historical coho, chinook and steelhead habitat in northern California.

Treesearch

A. Agrawal; R.S. Schick; E.P. Bjorkstedt; R.G. Szerlong; M.N. Goslin; B.C. Spence; T.H. Williams; K.M. Burnett

2005-01-01

Numerous Evolutionarily Significant Units (ESUs) of salmon and steelhead in California and the Pacific Northwest have been listed under the U.S. Endangered Species Act (ESA). In response, NOAA Fisheries convened Technical Recovery Teams (TRTs) to develop biological viability criteria for the listed ESUs. An understanding of biological structure is a critical first step...

77 FR 59582 - Endangered and Threatened Wildlife; 90-Day Finding on Petitions To List the Northeastern Pacific...

Federal Register 2010, 2011, 2012, 2013, 2014

2012-09-28

... discussing the species' status and trends, or in information describing impacts and threats to the species... the potential links between these demographic risks and the causative impacts and threats identified in section 4(a)(1). Information presented on impacts or threats should be specific to the species and...

77 FR 22760 - Endangered and Threatened Species; Notice of Intent To Update a Recovery Plan for the Blue Whale...

Federal Register 2010, 2011, 2012, 2013, 2014

2012-04-17

... Recovery Plan for the North Pacific Right Whale AGENCY: National Marine Fisheries Service (NMFS), National... recovery plans; request for information. SUMMARY: The National Marine Fisheries Service (NMFS) is... ESA. The recovery planning process is guided by the statutory language of Section 4(f) of the ESA and...

Qualitative Assessment: Evaluating the Impacts of Climate Change on Endangered Species Act Recovery Actions for the South Fork Nooksack River, WA

EPA Science Inventory

The South Fork Nooksack River (South Fork) is located in northwest Washington State and is home to nine species of Pacific salmon, including Nooksack early Chinook (aka, spring Chinook salmon), an iconic species for the Nooksack Indian Tribe. The quantity of salmon in the South F...

77 FR 2243 - Endangered and Threatened Wildlife and Plants; Designation of Critical Habitat and Taxonomic...

Federal Register 2010, 2011, 2012, 2013, 2014

2012-01-17

... anticipated effects of sea-level rise associated with climate change. (4) Specific information on the Pacific... sites and a new ocean inlet that allows the water level to rise and fall resembling the irregular semi..., the complete range of C. nivosus nivosus now includes the Florida occurrences of the subspecies...

78 FR 34347 - Endangered and Threatened Species; Recovery Plan for the North Pacific Right Whale

Federal Register 2010, 2011, 2012, 2013, 2014

2013-06-07

... analysis standard for threatened status (has no more than a 1 percent chance of extinction in 100 years... contribute to a real risk of extinction that cannot be incorporated into a Population Viability Analysis will... thought to substantially contribute to a real risk of extinction that cannot be incorporated into a...

78 FR 4835 - Endangered and Threatened Species; Recovery Plan for the North Pacific Right Whale

Federal Register 2010, 2011, 2012, 2013, 2014

2013-01-23

... threatened status (has no more than a 1 percent chance of extinction in 100 years) and the global population... substantially contribute to a real risk of extinction that cannot be incorporated into a Population Viability... factors or circumstances that are thought to substantially contribute to a real risk of extinction that...

77 FR 34334 - Western Pacific Pelagic Fisheries; Revised Limits on Sea Turtle Interactions in the Hawaii...

Federal Register 2010, 2011, 2012, 2013, 2014

2012-06-11

...-set longline fishery. The proposed rule would implement terms and conditions of the current biological..., WordPerfect, or Adobe PDF file formats only. A biological opinion issued under the Endangered Species... Network, et al., v. Department of Commerce, et al., and Hawaii Longline Association, Civil No. 09-00598...

Wildfire exposure to analysis on the national forests in the Pacific Northwest, USA

Treesearch

Alan A. Ager; Michelle Buonopane; Allison Reger; Mark A. Finney

2012-01-01

We analyzed wildfire exposure for key social and ecological features on the national forests in Oregon and Washington. The forests contain numerous urban interfaces, old growth forests, recreational sites, and habitat for rare and endangered species. Many of these resources are threatened by wildfire, especially in the east Cascade Mountains fire-prone forests. The...

Wildfire exposure analysis on the National Forests in the Pacific Northwest, USA

Treesearch

Alan A. Ager; Michelle Buonopane; Allison Reger; Mark A. Finney

2013-01-01

We analyzed wildfire exposure for key social and ecological features on the national forests in Oregon and Washington. The forests contain numerous urban interfaces, old growth forests, recreational sites, and habitat for rare and endangered species. Many of these resources are threatened by wildfire, especially in the east Cascade Mountains fire-prone forests. The...

77 FR 52301 - Endangered and Threatened Wildlife and Plants; 90-Day Finding on a Petition To List the Prince of...

Federal Register 2010, 2011, 2012, 2013, 2014

2012-08-29

... northern flying squirrel in the Pacific Northwest have concluded that optimal conditions for this species... Northwest, which clearly prefer complex, multi factorial habitat conditions that are characteristic of old... seeds, lichens, and fungi, all of which are more abundant in old-growth than in young-growth forests...

A comparison of a technical and a participatory application of social impact assessment.

Treesearch

Dennis R Becker; Charles C Harris; Erik A Nielsen; William J. McLaughlin

2004-01-01

Results of independent applications of a technical and a participatory approach to SIA are compared for an assessment of impacts of the proposed removal of hydroelectric dams to recover threatened and endangered salmon in the Pacific Northwest of the United States. The analysis focuses on empirical differences and similarities between the technical social analysis...

78 FR 47277 - Listing Endangered or Threatened Species: 12-Month Finding on a Petition To Delist the Southern...

Federal Register 2010, 2011, 2012, 2013, 2014

2013-08-05

...) Discreteness of the population segment in relation to the remainder of the species/taxon, and, if discrete; (2... Resident killer whale population is discrete and significant with respect to the North Pacific Resident... is discrete and significant, despite the fact that the taxonomic community has not yet formally named...

15 CFR 904.1 - Purpose and scope.

Code of Federal Regulations, 2011 CFR

2011-01-01

... violations of those statutes: (1) American Fisheries Act of 1998, Public Law 105-277; (2) Anadromous Fish.... 972-972h; (14) Endangered Species Act of 1973, 16 U.S.C. 1531-1543; (15) Fish and Seafood Promotion... U.S.C. 9101 et seq.; (28) Pacific Salmon Treaty Act of 1985, 16 U.S.C. 3631-3644; (29) Shark Finning...

Toward an integrated classification of ecosystems: Defining opportunities for managing fish and forest health

Treesearch

Bruce E. Rieman; Danny C. Lee; Russell F. Thurow; Paul F. Hessburg; James R. Sedell

2000-01-01

Many of the aquatic and terrestrial ecosystems of the Pacific Northwest United States have been simplified and degraded in part through past land-management activities. Recent listings of fishes under the Endangered Species Act and major new initiatives for the restoration of forest health have precipitated contentious debate among managers and conservation interests...

Proceedings of the Interservice/Industry Training Equipment Conference and Exhibition (3rd) Held at Orlando, Florida on November 30-December 2, 1981. Volume 2. Sessions 1, 2 and 3.

DTIC Science & Technology

1981-01-01

environments for various missions and under a wide variety of conditions. Let me tell you about the loggerhead turtle at Camp Lejeune. If you can be- S...on their in-brief, they said that it appeared because the loggerhead turtle comes aboard the Atlantic seaboard in our area, the 14 miles of beach we...required to submit the annual report to Congress, or to make nebulous qualifications and calculations about the flying hours saved. The last time we

Occurrence of fruiting structures allows determination of Purpureocillium lilacinum as an inciting agent of pleuritis and pneumonia in a loggerhead sea turtle (Caretta caretta) by histopathologic correlation to culture.

PubMed

Schumacher, V L; Mangold, B; Lenzycki, J; Hinckley, L; Sutton, D A; Frasca, S

2014-10-01

Purpureocillium lilacinum and Beauveria bassiana were isolated from lung sampled at necropsy of a 12 year-old female loggerhead sea turtle (Caretta caretta) that had displayed abnormal buoyancy. Histopathologic evaluation revealed pleuritis and pneumonia with non-melanized, septate hyphae and fruiting structures identical to those of P. lilacinum. This case emphasizes the importance of a histological correlate to fungal culture when environmental fungi are isolated and demonstrates the infrequent phenomenon of fruiting or conidial production in tissue.

Conservation genetics of American crocodile, Crocodylus acutus, populations in Pacific Costa Rica

USGS Publications Warehouse

Mauger, Laurie A.; Velez, Elizabeth; Cherkiss, Michael S.; Brien, Matthew L.; Mazzotti, Frank J.; Spotila, James R.

2017-01-01

Maintaining genetic diversity is crucial for the survival and management of threatened and endangered species. In this study, we analyzed genetic diversity and population genetic structure at neutral loci in American crocodiles, Crocodylus acutus, from several areas (Parque Nacional Marino Las Baulas, Parque Nacional Santa Rosa, Parque Nacional Palo Verde, Rio Tarcoles, and Osa Conservation Area) in Pacific Costa Rica. We genotyped 184 individuals at nine microsatellite loci to describe the genetic diversity and conservation genetics between and among populations. No population was at Hardy-Weinberg Equilibrium (HWE) over all loci tested and a small to moderate amount of inbreeding was present. Populations along the Pacific coast had an average heterozygosity of 0.572 across all loci. All populations were significantly differentiated from each other with both FST and RST measures of population differentiation with a greater degree of molecular variance (81%) found within populations. Our results suggest C. acutus populations in Pacific Costa Rica were not panmictic with moderate levels of genetic diversity. An effective management plan that maintains the connectivity between clusters is critical to the success of C. acutus in Pacific Costa Rica.

Migration, foraging, and residency patterns for Northern Gulf loggerheads: implications of local threats and international movements

USGS Publications Warehouse

Hart, Kristen M.; Lamont, Margaret M.; Sartain-Iverson, Autumn R.; Fujisaki, Ikuko

2014-01-01

Northern Gulf of Mexico (NGoM) loggerheads (Caretta caretta) make up one of the smallest subpopulations of this threatened species and have declining nest numbers. We used satellite telemetry and a switching state-space model to identify distinct foraging areas used by 59 NGoM loggerheads tagged during 2010–2013. We tagged turtles after nesting at three sites, 1 in Alabama (Gulf Shores; n = 37) and 2 in Florida (St. Joseph Peninsula; n = 20 and Eglin Air Force Base; n = 2). Peak migration time was 22 July to 9 August during which >40% of turtles were in migration mode; the mean post-nesting migration period was 23.0 d (±13.8 d SD). After displacement from nesting beaches, 44 turtles traveled to foraging sites where they remained resident throughout tracking durations. Selected foraging locations were variable distances from tagging sites, and in 5 geographic regions; no turtles selected foraging sites outside the Gulf of Mexico (GoM). Foraging sites delineated using 50% kernel density estimation were located a mean distance of 47.6 km from land and in water with mean depth of −32.5 m; other foraging sites, delineated using minimum convex polygons, were located a mean distance of 43.0 km from land and in water with a mean depth of −24.9 m. Foraging sites overlapped with known trawling activities, oil and gas extraction activities, and the footprint of surface oiling during the 2010 Deepwater Horizon oil spill (n = 10). Our results highlight the year-round use of habitats in the GoM by loggerheads that nest in the NGoM. Our findings indicate that protection of females in this subpopulation requires both international collaborations and management of threats that spatially overlap with distinct foraging habitats.

A mechanism that maintains alternative life histories in a loggerhead sea turtle population.

PubMed

Hatase, Hideo; Omuta, Kazuyoshi; Tsukamoto, Katsumi

2013-11-01

Intrapopulation variation in habitat use is commonly seen among mobile animals, yet the mechanisms maintaining it have rarely been researched among untrackable species. To investigate how alternative life histories are maintained in a population of the loggerhead sea turtle (Caretta caretta), cumulative reproductive output was evaluated and compared between small planktivores inhabiting oceanic areas (with water depths > 200 m) and large benthivores inhabiting neritic areas (depths < 200 m) that sympatrically nested at Yakushima Island, Japan, from 1986 to 2011. In total, 362 nesting females sampled in three different years were classified into the two foraging groups based on stable isotope ratios in egg yolks. There were significant differences between the two foraging groups in most recorded life history parameters (clutch size, clutch frequency, breeding frequency, and remigration intervals), with the exception of emergence success. We did not find evidence of life history trade-offs, nor age-related changes in fecundity. Over the 26-year study period, we calculated a 2.4-fold greater reproductive output for neritic foragers than for oceanic ones, accounting for breeding and clutch frequency. Temporal consistencies in stable isotope ratios and remigration intervals within females suggested that female Japanese loggerheads show fidelity to respective foraging habitats throughout the adult stage. The large difference in productivity between the two groups was unlikely to be offset by the difference in survival during the period from aboveground emergence to first reproduction, suggesting that oceanic foragers have a lower level of fitness than neritic ones. Together with an absence of genetic structure between foraging groups, we infer that alternative life histories in a loggerhead turtle population are maintained by a conditional strategy.

Migration, foraging, and residency patterns for Northern Gulf loggerheads: implications of local threats and international movements.

PubMed

Hart, Kristen M; Lamont, Margaret M; Sartain, Autumn R; Fujisaki, Ikuko

2014-01-01

Northern Gulf of Mexico (NGoM) loggerheads (Caretta caretta) make up one of the smallest subpopulations of this threatened species and have declining nest numbers. We used satellite telemetry and a switching state-space model to identify distinct foraging areas used by 59 NGoM loggerheads tagged during 2010-2013. We tagged turtles after nesting at three sites, 1 in Alabama (Gulf Shores; n = 37) and 2 in Florida (St. Joseph Peninsula; n = 20 and Eglin Air Force Base; n = 2). Peak migration time was 22 July to 9 August during which >40% of turtles were in migration mode; the mean post-nesting migration period was 23.0 d (±13.8 d SD). After displacement from nesting beaches, 44 turtles traveled to foraging sites where they remained resident throughout tracking durations. Selected foraging locations were variable distances from tagging sites, and in 5 geographic regions; no turtles selected foraging sites outside the Gulf of Mexico (GoM). Foraging sites delineated using 50% kernel density estimation were located a mean distance of 47.6 km from land and in water with mean depth of -32.5 m; other foraging sites, delineated using minimum convex polygons, were located a mean distance of 43.0 km from land and in water with a mean depth of -24.9 m. Foraging sites overlapped with known trawling activities, oil and gas extraction activities, and the footprint of surface oiling during the 2010 Deepwater Horizon oil spill (n = 10). Our results highlight the year-round use of habitats in the GoM by loggerheads that nest in the NGoM. Our findings indicate that protection of females in this subpopulation requires both international collaborations and management of threats that spatially overlap with distinct foraging habitats.

Effects of alfaxalone administered intravenously to healthy yearling loggerhead sea turtles (Caretta caretta) at three different doses.

PubMed

Phillips, Brianne E; Posner, Lysa P; Lewbart, Gregory A; Christiansen, Emily F; Harms, Craig A

2017-04-15

OBJECTIVE To compare physiologic and anesthetic effects of alfaxalone administered IV to yearling loggerhead sea turtles (Caretta caretta) at 3 different doses. DESIGN Randomized crossover study. ANIMALS 9 healthy yearling loggerhead sea turtles. PROCEDURES Animals received each of 3 doses of alfaxalone (3 mg/kg [1.4 mg/lb], 5 mg/kg [2.3 mg/lb], or 10 mg/kg [4.5 mg/lb]) administered IV in randomly assigned order, with a minimum 7-day washout period between doses. Endotracheal intubation was attempted following anesthetic induction, and heart rate, sedation depth, cloacal temperature, and respirations were monitored. Times to first effect, induction, first voluntary muscle movement, first respiration, and recovery were recorded. Venous blood gas analysis was performed at 0 and 30 minutes. Assisted ventilation was performed if apnea persisted 30 minutes following induction. RESULTS Median anesthetic induction time for all 3 doses was 2 minutes. Endotracheal intubation was accomplished in all turtles following induction. Heart rate significantly increased after the 3- and 5-mg/kg doses were administered. Median intervals from alfaxalone administration to first spontaneous respiration were 16, 22, and 54 minutes for the 3-, 5-, and 10-mg/kg doses, respectively, and median intervals to recovery were 28, 46, and 90 minutes, respectively. Assisted ventilation was required for 1 turtle after receiving the 5-mg/kg dose and for 5 turtles after receiving the 10-mg/kg dose. The 10-mg/kg dose resulted in respiratory acidosis and marked hypoxemia at 30 minutes. CONCLUSIONS AND CLINICAL RELEVANCE IV alfaxalone administration to loggerhead sea turtles resulted in a rapid anesthetic induction and dose-dependent duration of sedation. Assisted ventilation is recommended if the 10 mg/kg dose is administered.

Measuring Energy Expenditure in Sub-Adult and Hatchling Sea Turtles via Accelerometry

PubMed Central

Halsey, Lewis G.; Jones, T. Todd; Jones, David R.; Liebsch, Nikolai; Booth, David T.

2011-01-01

Measuring the metabolic of sea turtles is fundamental to understanding their ecology yet the presently available methods are limited. Accelerometry is a relatively new technique for estimating metabolic rate that has shown promise with a number of species but its utility with air-breathing divers is not yet established. The present study undertakes laboratory experiments to investigate whether rate of oxygen uptake ( o 2) at the surface in active sub-adult green turtles Chelonia mydas and hatchling loggerhead turtles Caretta caretta correlates with overall dynamic body acceleration (ODBA), a derivative of acceleration used as a proxy for metabolic rate. Six green turtles (25–44 kg) and two loggerhead turtles (20 g) were instrumented with tri-axial acceleration logging devices and placed singly into a respirometry chamber. The green turtles were able to submerge freely within a 1.5 m deep tank and the loggerhead turtles were tethered in water 16 cm deep so that they swam at the surface. A significant prediction equation for mean o 2 over an hour in a green turtle from measures of ODBA and mean flipper length (R2 = 0.56) returned a mean estimate error across turtles of 8.0%. The range of temperatures used in the green turtle experiments (22–30°C) had only a small effect on o 2. A o 2-ODBA equation for the loggerhead hatchling data was also significant (R2 = 0.67). Together these data indicate the potential of the accelerometry technique for estimating energy expenditure in sea turtles, which may have important applications in sea turtle diving ecology, and also in conservation such as assessing turtle survival times when trapped underwater in fishing nets. PMID:21829613

Locomotor activity during the frenzy swim: analysing early swimming behaviour in hatchling sea turtles.

PubMed

Pereira, Carla M; Booth, David T; Limpus, Colin J

2011-12-01

Swimming effort of hatchling sea turtles varies across species. In this study we analysed how swim thrust is produced in terms of power stroke rate, mean maximum thrust per power stroke and percentage of time spent power stroking throughout the first 18 h of swimming after entering the water, in both loggerhead and flatback turtle hatchlings and compared this with previous data from green turtle hatchlings. Loggerhead and green turtle hatchlings had similar power stroke rates and percentage of time spent power stroking throughout the trial, although mean maximum thrust was always significantly higher in green hatchlings, making them the most vigorous swimmers in our three-species comparison. Flatback hatchlings, however, were different from the other two species, with overall lower values in all three swimming variables. Their swimming effort dropped significantly during the first 2 h and kept decreasing significantly until the end of the trial at 18 h. These results support the hypothesis that ecological factors mould the swimming behaviour of hatchling sea turtles, with predator pressure being important in determining the strategy used to swim offshore. Loggerhead and green turtle hatchlings seem to adopt an intensely vigorous and energetically costly frenzy swim that would quickly take them offshore into the open ocean in order to reduce their exposure to near-shore aquatic predators. Flatback hatchlings, however, are restricted in geographic distribution and remain within the continental shelf region where predator pressure is probably relatively constant. For this reason, flatback hatchlings might use only part of their energy reserves during a less vigorous frenzy phase, with lower overall energy expenditure during the first day compared with loggerhead and green turtle hatchlings.

An Investigation into the Poor Survival of an Endangered Coho Salmon Population

PubMed Central

Chittenden, Cedar M.; Melnychuk, Michael C.; Welch, David W.; McKinley, R. Scott

2010-01-01

To investigate reasons for the decline of an endangered population of coho salmon (O. kisutch), 190 smolts were acoustically tagged during three consecutive years and their movements and survival were estimated using the Pacific Ocean Shelf Tracking project (POST) array. Median travel times of the Thompson River coho salmon smolts to the lower Fraser River sub-array were 16, 12 and 10 days during 2004, 2005 and 2006, respectively. Few smolts were recorded on marine arrays. Freshwater survival rates of the tagged smolts during their downstream migration were 0.0–5.6% (0.0–9.0% s.e.) in 2004, 7.0% (6.2% s.e.) in 2005, and 50.9% (18.6% s.e.) in 2006. Overall smolt-to-adult return rates exhibited a similar pattern, which suggests that low freshwater survival rates of out-migrating smolts may be a primary reason for the poor conservation status of this endangered coho salmon population. PMID:20526367

Partnerships in the Pacific Northwest help save an endangered species, whitebark pine (Pinus albicaulis): an example of dynamic genetic conservation

Treesearch

Richard A. Sniezko; Michael P. Murray; Charlie V. Cartwright; Jenifer Beck; Dan Omdal; Amy Ramsey; Zolton Bair; George McFadden; Doug Manion; Katherine Fitch; Philip Wapato; Jennifer A. Gruhn; Michael Crawford; Regina M. Rochefort; John Syring; Jun-Jun Liu; Heather E. Lintz; Lorinda Bullington; Brianna A. McTeague; Angelia Kegley

2017-01-01

Whitebark pine (WBP, Pinus albicaulis) is a keystone species distributed widely at high elevations across western North America. It is in decline due to a combination of threats including infection from white pine blister rust (WPBR, caused by the non-native fungal pathogen Cronartium ribicola), mountain pine beetle (...

Turbidity changes during culvert to bridge upgrades at Carmen Creek, Idaho

Treesearch

Randy B. Foltz; Breann Westfall; Ben Kopyscianski

2013-01-01

Forest Service, BLM, and state forest roads provide access for timber harvest and recreational use. Culverts used on these roads were historically designed to convey water under the road with little attention given to passage of aquatic organisms. In the past decade or so, driven largely by the Endangered Species Act listing of various salmonids in the Pacific...

78 FR 40104 - Endangered and Threatened Species; Notice of Intent To Prepare a Recovery Plan for Pacific Eulachon

Federal Register 2010, 2011, 2012, 2013, 2014

2013-07-03

... Coordinator. Business hours are 8 a.m. to 5 p.m. Monday through Friday, except Federal holidays. Via fax: 503... threats; (b) estimates of the time and cost to implement recovery actions; (c) critical knowledge gaps and/or uncertainties that need to be resolved to better inform recovery efforts; and (d) research...

The Land Remembers: Landscape Terms and Place Names in Lowland Chontal of Oaxaca, Mexico

ERIC Educational Resources Information Center

O'Connor, Loretta; Kroefges, Peter C.

2008-01-01

This paper examines landscape terminology and place names of the Chontal region in the state of Oaxaca in southern Mexico, with a focus on terms from Lowland Chontal, a highly endangered language spoken near the Pacific coast. In addition to the linguistic analysis, the paper presents a general description of the physical geography of the area and…

Resting structures and resting habitat of fishers in the southern Sierra Nevada, California

Treesearch

Kathryn L. Purcell; Amie K. Mazzoni; Sylvia R. Mori; Brian B. Boroski

2009-01-01

The fisher (Martes pennanti) is a forest mustelid endemic to North America that has experienced range reductions in Pacific states that have led to their listing under the Endangered Species Act as warranted but precluded by higher priorities. The viability of the southern Sierra Nevada fisher population is of particular concern due to its reduced...

The role of fire in Research Natural Areas in the Northern Rockies and Pacific Northwest

Treesearch

Sarah E. Greene; Angela Evenden

1996-01-01

Forest Service Research Natural Areas are established to preserve examples of all significant natural ecosystems for comparison with those influenced andlor managed by humans, to provide educational and research areas for ecological and environmental studies, and to preserve gene pools for typical and rare and endangered species. The Research Natural Area program in...

Microsatellite variation reveals weak genetic structure and retention of genetic variability in threatened Chinook salmon (Oncorhynchus tshawytcha) within a Snake River watershed

Treesearch

Helen Neville; Daniel Isaak; Russell Thurow; Jason Dunham; Bruce Rieman

2007-01-01

Pacific salmon (Oncorhynchus spp.) have been central to the development of management concepts associated with evolutionarily significant units (ESUs), yet there are still relatively few studies of genetic diversity within threatened and endangered ESUs for salmon or other species. We analyzed genetic variation at 10 microsatellite loci to evaluate...

Software for calculating vegetation disturbance and recovery by using the equivalent clearcut area model.

Treesearch

Alan A. Ager; Caty Clifton

2005-01-01

The use of cumulative watershed effects models is mandated as part of interagency consultation over projects that might affect habitat for salmonids federally listed as threatened or endangered. Cumulative effects analysis is also required by a number of national forest plans in the Pacific Northwest Region (Region 6). Cumulative watershed effects in many cases are...

The Forest Ecosystem Study: background, rationale, implementation, baseline conditions, and silvicultural assessment.

Treesearch

Andrew B. Carey; David R. Thysell; Angus W. Brodie

1999-01-01

The Forest Ecosystem Study (FES) came about as an early response to the need for innovative silvicultural methods designed to stimulate development of late-successional attributes in managed forests—a need ensuing from the exceptional and longstanding controversies over old-growth forests and endangered species concerns in the Pacific Northwest. In 1991, scientists...

Increased incidence of red imported fire ant (Hymenoptera: Formicidae) presence in loggerhead sea turtle (Testudines: Cheloniidae) nests and observations of hatchling mortality

USGS Publications Warehouse

Parris, L.B.; Lamont, M.M.; Carthy, R.R.

2002-01-01

Hatching sea turtles may be at risk to fire ant predation during egg incubation, and especially at risk once pipped from the egg, prior to hatchling emergence from the nest. In addition to direct mortality, fire ants have the potential to inflict debilitating injuries that may directly affect survival of the young. The increased incidence of red imported fire ant induced mortality and envenomization of loggerhead sea turtle hatchlings on Cape San Blas suggests this invasive ant species may pose a serious threat to the future of this genetically distinct population.

Incubation temperature effects on hatchling performance in the loggerhead sea turtle (Caretta caretta).

PubMed

Fisher, Leah R; Godfrey, Matthew H; Owens, David W

2014-01-01

Incubation temperature has significant developmental effects on oviparous animals, including affecting sexual differentiation for several species. Incubation temperature also affects traits that can influence survival, a theory that is verified in this study for the Northwest Atlantic loggerhead sea turtle (Caretta caretta). We conducted controlled laboratory incubations and experiments to test for an effect of incubation temperature on performance of loggerhead hatchlings. Sixty-eight hatchlings were tested in 2011, and 31 in 2012, produced from eggs incubated at 11 different constant temperatures ranging from 27°C to 33°C. Following their emergence from the eggs, we tested righting response, crawling speed, and conducted a 24-hour long swim test. The results support previous studies on sea turtle hatchlings, with an effect of incubation temperature seen on survivorship, righting response time, crawling speed, change in crawl speed, and overall swim activity, and with hatchlings incubated at 27°C showing decreased locomotor abilities. No hatchlings survived to be tested in both years when incubated at 32°C and above. Differences in survivorship of hatchlings incubated at high temperatures are important in light of projected higher sand temperatures due to climate change, and could indicate increased mortality from incubation temperature effects.

Monoclonal antibodies against loggerhead sea turtle, Caretta caretta, IgY isoforms reveal differential contributions to antibody titers and relatedness among other sea turtles.

PubMed

Rodgers, Maria L; Rice, Charles D

2018-05-19

Serum from loggerhead sea turtles, Caretta caretta, was collected from the southeast Atlantic Ocean during routine summer monitoring studies in 2017. Serum immunoglobulin IgY was purified and used to develop IgY isoform-specific monoclonal antibodies (mAb). mAb LH12 was developed against the 66 kDa heavy chain of IgY, mAb LH1 was developed against the truncated heavy chain of approximately 37 kDA, and mAb LH9 was developed against the 23 kDa light chains. mAb LH9 reacts with the light chains of all sea turtles, mAb LH12 reacts with the long heavy chain of all sea turtles within the family Cheloniidae, and mAb LH1 reacts with the truncated form of IgY in both olive and Kemp's ridley turtles. Circulating IgY antibodies against three different marine bacterial pathogens were determined in 16 loggerhead samples using these mAbs. mAb LH12 detects higher titers than mAb LH1, and mAb LH9 detects the highest titers. Copyright © 2018 Elsevier Ltd. All rights reserved.

The use of mesoscale eddies by juvenile loggerhead sea turtles (Caretta caretta) in the southwestern Atlantic.

PubMed

Gaube, Peter; Barceló, Caren; McGillicuddy, Dennis J; Domingo, Andrés; Miller, Philip; Giffoni, Bruno; Marcovaldi, Neca; Swimmer, Yonat

2017-01-01

Marine animals, such as turtles, seabirds and pelagic fishes, are observed to travel and congregate around eddies in the open ocean. Mesoscale eddies, large swirling ocean vortices with radius scales of approximately 50-100 km, provide environmental variability that can structure these populations. In this study, we investigate the use of mesoscale eddies by 24 individual juvenile loggerhead sea turtles (Caretta caretta) in the Brazil-Malvinas Confluence region. The influence of eddies on turtles is assessed by collocating the turtle trajectories to the tracks of mesoscale eddies identified in maps of sea level anomaly. Juvenile loggerhead sea turtles are significantly more likely to be located in the interiors of anticyclones in this region. The distribution of surface drifters in eddy interiors reveals no significant association with the interiors of cyclones or anticyclones, suggesting higher prevalence of turtles in anticyclones is a result of their behavior. In the southern portion of the Brazil-Malvinas Confluence region, turtle swimming speed is significantly slower in the interiors of anticyclones, when compared to the periphery, suggesting that these turtles are possibly feeding on prey items associated with anomalously low near-surface chlorophyll concentrations observed in those features.

The use of mesoscale eddies by juvenile loggerhead sea turtles (Caretta caretta) in the southwestern Atlantic

PubMed Central

Barceló, Caren; McGillicuddy, Dennis J.; Domingo, Andrés; Miller, Philip; Giffoni, Bruno; Marcovaldi, Neca; Swimmer, Yonat

2017-01-01

Marine animals, such as turtles, seabirds and pelagic fishes, are observed to travel and congregate around eddies in the open ocean. Mesoscale eddies, large swirling ocean vortices with radius scales of approximately 50–100 km, provide environmental variability that can structure these populations. In this study, we investigate the use of mesoscale eddies by 24 individual juvenile loggerhead sea turtles (Caretta caretta) in the Brazil-Malvinas Confluence region. The influence of eddies on turtles is assessed by collocating the turtle trajectories to the tracks of mesoscale eddies identified in maps of sea level anomaly. Juvenile loggerhead sea turtles are significantly more likely to be located in the interiors of anticyclones in this region. The distribution of surface drifters in eddy interiors reveals no significant association with the interiors of cyclones or anticyclones, suggesting higher prevalence of turtles in anticyclones is a result of their behavior. In the southern portion of the Brazil-Malvinas Confluence region, turtle swimming speed is significantly slower in the interiors of anticyclones, when compared to the periphery, suggesting that these turtles are possibly feeding on prey items associated with anomalously low near-surface chlorophyll concentrations observed in those features. PMID:28249020

Underwater hearing in the loggerhead turtle (Caretta caretta): a comparison of behavioral and auditory evoked potential audiograms.

PubMed

Martin, Kelly J; Alessi, Sarah C; Gaspard, Joseph C; Tucker, Anton D; Bauer, Gordon B; Mann, David A

2012-09-01

The purpose of this study was to compare underwater behavioral and auditory evoked potential (AEP) audiograms in a single captive adult loggerhead sea turtle (Caretta caretta). The behavioral audiogram was collected using a go/no-go response procedure and a modified staircase method of threshold determination. AEP thresholds were measured using subdermal electrodes placed beneath the frontoparietal scale, dorsal to the midbrain. Both methods showed the loggerhead sea turtle to have low frequency hearing with best sensitivity between 100 and 400 Hz. AEP testing yielded thresholds from 100 to 1131 Hz with best sensitivity at 200 and 400 Hz (110 dB re. 1 μPa). Behavioral testing using 2 s tonal stimuli yielded underwater thresholds from 50 to 800 Hz with best sensitivity at 100 Hz (98 dB re. 1 μPa). Behavioral thresholds averaged 8 dB lower than AEP thresholds from 100 to 400 Hz and 5 dB higher at 800 Hz. The results suggest that AEP testing can be a good alternative to measuring a behavioral audiogram with wild or untrained marine turtles and when time is a crucial factor.

Predatory bird populations in the east Mojave Desert, California

USGS Publications Warehouse

Knight, R.L.; Camp, R.J.; Boarman, W.I.; Knight, H.A.L.

1999-01-01

We surveyed 7 species of predatory birds weekly during a 12-month period (December 1992 through November 1993) in the east Mojave Desert, California. The Common Raven (Corvus corax) was the most frequently observed species with an average of 6.9 sightings per 100 km. Turkey Vultures (Cathartes aura), Red-tailed Hawks (Buteo jamaicensis), Loggerhead Shrikes (Lanius ludovicianus), American Kestrels (Falco sparverius), Golden Eagles (Aquila chrysaetos), and Prairie Falcons (Falco mexicanus) were seen in decreasing order of frequency of observation through the study period. Ravens, Red-tailed Hawks, Loggerhead Shrikes, American Kestrels, and Prairie Falcons were seen throughout the year. Turkey Vultures were not present during winter months, while Golden Eagles were seen only during November and December. Turkey Vultures, Red-tailed Hawks, and ravens were most numerous on agricultural lands, while Loggerhead Shrikes were most Common at urban areas. Raven numbers increased with increasing number of linear rights-of-way parallel to the survey route. Perching was the most common behavior type, although Turkey Vultures and ravens were often observed soaring, flying, or standing on the ground near highways. Transmission powerline towers and telephone poles were used as perch sites disproportionately to availability.

Hybridization among the ancient mariners: characterization of marine turtle hybrids with molecular genetic assays.

PubMed

Karl, S A; Bowen, B W; Avise, J C

1995-01-01

Reports of hybridization between marine turtle species (family Cheloniidae) have been difficult to authenticate based solely on morphological evidence. Here we employ molecular genetic assays to document the sporadic, natural occurrence of viable interspecific hybrids between species representing four of the five genera of cheloniid sea turtles. Using multiple DNA markers from single-copy nuclear loci, eight suspected hybrids (based on morphology) were confirmed to be the products of matings involving the loggerhead turtle (Caretta caretta) x Kemp's ridley (Lepidochelys kempii) (N = 1 specimen), loggerhead turtle x hawksbill (Eretmochelys imbricata) (N = 2), loggerhead turtle x green turtle (Chelonia mydas) (N = 4), and green turtle x hawksbill (N = 1). Molecular markers from mitochondrial DNA permitted identification of the maternal parental species in each cross. The species involved in these hybridization events represent evolutionary lineages thought to have separated 10-75 million years ago (mya) and thus may be among the oldest vertebrate lineages capable of producing viable hybrids in nature. In some cases, human intervention with the life cycles of marine turtles (e.g., through habitat alteration, captive rearing, or attempts to establish new breeding sites) may have increased the opportunities for interspecific hybridization.

Baseline plasma corticosterone, haematological and biochemical results in nesting and rehabilitating loggerhead sea turtles (Caretta caretta)

PubMed Central

Flower, Jennifer E.; Norton, Terry M.; Andrews, Kimberly M.; Nelson, Steven E.; Parker, Clare E.; Romero, L. Michael; Mitchell, Mark A.

2015-01-01

The evaluation of hormonal responses to stress in reptiles relies on acquisition of baseline corticosterone concentrations; however, the stress associated with the restraint needed to collect the blood samples can affect the results. The purpose of this study was to determine a time limit for the collection of blood samples to evaluate baseline corticosterone, haematological and biochemical results in nesting (n = 11) and rehabilitating (n = 16) loggerhead sea turtles (Caretta caretta). Blood samples were collected from the dorsal cervical sinus of each turtle immediately after touching the animal (t0; 0–3 min) and 3 (t3; 3–6 min), 6 (t6; 6–9 min; nesting turtles only), 10 (t10; 10–13 min) and 30 min (t30; rehabilitating turtles only) after the initial hands-on time. Consistent between the rehabilitating and nesting turtles, there was a subtle yet significant increase in white blood cell counts over time. Despite the fact that white blood cell counts increased during the sampling period, there was no direct correlation between white blood cell count and corticosterone in the sampled turtles. In the nesting turtles, significant elevations in corticosterone were noted between t0 and t3 (P = 0.014) and between t0 and t6 (P = 0.022). Values at t10 were not significantly different from those at t0 (P = 0.102); however, there was a trend for the corticosterone values to continue to increase. These results suggest that sampling of nesting loggerhead sea turtles within 3 min of handling will provide baseline corticosterone concentrations in their natural environment. Significant elevations in corticosterone were also noted in the rehabilitating loggerhead sea turtles between t0 and t10 (P = 0.02) and between t0 and t30 of sampling (P = 0.0001). These results suggest that sampling of loggerhead sea turtles within 6 min of handling should provide baseline corticosterone concentrations in a rehabilitation setting. The delay in the corticosterone response noted in the rehabilitating turtles may be associated with the daily contact (visual or direct) they have with their human caretakers. PMID:27293688

76 FR 7633 - Endangered and Threatened Wildlife and Plants; 12-Month Finding on a Petition to List the Pacific...

Federal Register 2010, 2011, 2012, 2013, 2014

2011-02-10

... approved in the case of Center for Biological Diversity v. U.S. Fish and Wildlife Service, et al. (3:08-cv.... The earliest studies of food habits were based on examination of stomachs from walruses killed by..., these early studies did not take into account the differential rate of digestion of prey items...

Influence of a weak field of pulsed DC electricity on the behavior and incidence of injury in adult Steelhead and Pacific Lamprey

USGS Publications Warehouse

Mesa, Matthew G.; Copeland, Elizabeth S.

2009-01-01

Predation by pinnipeds, such as California sea lions Zalophus californianus, Pacific harbor seals Phoca vitulina, and Stellar sea lions Eumetopias jubatus on adult Pacific salmon Oncorhynchus spp in the lower Columbia River has become a serious concern for fishery managers trying to conserve and restore runs of threatened and endangered fish. As a result, Smith-Root, Incorporated (SRI; Vancouver, Washington), manufacturers of electrofishing and closely-related equipment, proposed a project to evaluate the potential of an electrical barrier to deter marine mammals and reduce the amount of predation on adult salmonids (SRI 2007). The objectives of their work were to develop, deploy, and evaluate a passive, integrated sonar and electric barrier that would selectively inhibit the upstream movements of marine mammals and reduce predation, but would not injure pinnipeds or impact anadromous fish migrations. However, before such a device could be deployed in the field, concerns by regional fishery managers about the potential effects of such a device on the migratory behavior of Pacific salmon, steelhead O. mykiss, Pacific lampreys Entoshpenus tridentata, and white sturgeon Acipenser transmontanus, needed to be addressed. In this report, we describe the results of laboratory research designed to evaluate the effects of prototype electric barriers on adult steelhead and Pacific lampreys.

An Assessment of the Status of Captive Broodstock Technology of Pacific Salmon, 1995 Final Report.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Flagg, Thomas A.; Mahnaken, Conrad V.W.; Hard, Jeffrey J.

1995-06-01

This report provides guidance for the refinement and use of captive broodstock technology for Pacific salmon (Oncorhynchus spp.) by bringing together information on the husbandry techniques, genetic risks, physiology, nutrition, and pathology affecting captive broodstocks. Captive broodstock rearing of Pacific salmon is an evolving technology, as yet without well defined standards. At present, we regard captive rearing of Pacific salmon as problematic: high mortality rates and low egg viability were common in the programs we reviewed for this report. One of the most important elements in fish husbandry is the culture environment itself. Many captive broodstock programs for Pacific salmonmore » have reared fish from smolt-to-adult in seawater net-pens, and most have shown success in providing gametes for recovery efforts. However, some programs have lost entire brood years to diseases that transmitted rapidly in this medium. Current programs for endangered species of Pacific salmon rear most fish full-term to maturity in fresh well-water, since ground water is low in pathogens and thus helps ensure survival to adulthood. Our review suggested that captive rearing of fish in either freshwater, well-water, or filtered and sterilized seawater supplied to land-based tanks should produce higher survival than culture in seawater net-pens.« less

Asynchronous emergence by loggerhead turtle (Caretta caretta) hatchlings

NASA Astrophysics Data System (ADS)

Houghton, J. D. R.; Hays, G. C.

2001-03-01

For many decades it has been accepted that marine turtle hatchlings from the same nest generally emerge from the sand together. However, for loggerhead turtles (Caretta caretta) nesting on the Greek Island of Kefalonia, a more asynchronous pattern of emergence has been documented. By placing temperature loggers at the top and bottom of nests laid on Kefalonia during 1998, we examined whether this asynchronous emergence was related to the thermal conditions within nests. Pronounced thermal variation existed not only between, but also within, individual nests. These within-nest temperature differences were related to the patterns of hatchling emergence, with hatchlings from nests displaying large thermal ranges emerging over a longer time-scale than those characterised by more uniform temperatures.

Population assessment of the American crocodile, Crocodylus acutus (Crocodilia: Crocodylidae) on the Pacific coast of Costa Rica.

PubMed

Mauger, Laurie A; Velez, Elizabeth; Cherkiss, Michael S; Brien, Matthew L; Boston, Michael; Mazzotti, Frank J; Spotila, James R

2012-12-01

The American crocodile, Crocodylus acutus, is widely distributed in the American neotropics. It is endangered throughout most of its range and is listed as vulnerable by the International Union for the Conservation of Natural Fauna and Flora (IUCN) and on Appendix I of the Convention for the International Trade in Endangered Species of Wild Flora and Fauna (CITES). Despite this listing, there are few published reports on population status throughout most of its range. We investigated the status of the C. acutus, at several locations along the Pacific coast of Costa Rica. We carried out spotlight and nesting surveys from 2007-2009 along the Costa Rican Pacific coast in four distinct areas, coastal areas of Las Baulas (N=40) and Santa Rosa (N=9) National Parks and the Osa Conservation Area (N=13), and upriver in Palo Verde National Park (N=11). We recorded crocodile locations and standard environmental data at each observation. Encounter rates, population structure, distribution within each area and data on successful nesting (presence of hatchlings, nests, etc) were determined. We attempted to capture all crocodiles to record standard morphometrics. A total of 586 crocodiles were observed along 185.8km of survey route. The majority of animals encountered (54.9%) were either hatchlings (<0.5m) or juveniles (0.5-1.25m). The average non-hatchling encounter rate per survey for the Pacific coast was 3.1 crocodiles/km, with individual encounter rates ranging from 1.2 crocodiles/km to 4.3 crocodiles/ km in Las Baulas National Park and the Osa Conservation Area respectively. Distribution of size classes within the individual locations did not differ with the exception of Santa Rosa and Las Baulas National Parks, where hatchlings were found in water with lower salinities. These were the first systematic surveys in several of the areas studied and additional work is needed to further characterize the American crocodile population in Costa Rica.

The Maternal Legacy: Female Identity Predicts Offspring Sex Ratio in the Loggerhead Sea Turtle.

PubMed

Reneker, Jaymie L; Kamel, Stephanie J

2016-07-01

In organisms with temperature-dependent sex determination, the incubation environment plays a key role in determining offspring sex ratios. Given that global temperatures have warmed approximately 0.6 °C in the last century, it is necessary to consider how organisms will adjust to climate change. To better understand the degree to which mothers influence the sex ratios of their offspring, we use 24 years of nesting data for individual female loggerhead sea turtles (Caretta caretta) observed on Bald Head Island, North Carolina. We find that maternal identity is the best predictor of nest sex ratio in univariate and multivariate predictive models. We find significant variability in estimated nest sex ratios among mothers, but a high degree of consistency within mothers, despite substantial spatial and temporal thermal variation. Our results suggest that individual differences in nesting preferences are the main driver behind divergences in nest sex ratios. As such, a female's ability to plastically adjust her nest sex ratios in response to environmental conditions is constrained, potentially limiting how individuals behaviorally mitigate the effects of environmental change. Given that many loggerhead populations already show female-biased offspring sex ratios, understanding maternal behavioral responses is critical for predicting the future of long-lived species vulnerable to extinction.

The Maternal Legacy: Female Identity Predicts Offspring Sex Ratio in the Loggerhead Sea Turtle

PubMed Central

Reneker, Jaymie L.; Kamel, Stephanie J.

2016-01-01

In organisms with temperature-dependent sex determination, the incubation environment plays a key role in determining offspring sex ratios. Given that global temperatures have warmed approximately 0.6 °C in the last century, it is necessary to consider how organisms will adjust to climate change. To better understand the degree to which mothers influence the sex ratios of their offspring, we use 24 years of nesting data for individual female loggerhead sea turtles (Caretta caretta) observed on Bald Head Island, North Carolina. We find that maternal identity is the best predictor of nest sex ratio in univariate and multivariate predictive models. We find significant variability in estimated nest sex ratios among mothers, but a high degree of consistency within mothers, despite substantial spatial and temporal thermal variation. Our results suggest that individual differences in nesting preferences are the main driver behind divergences in nest sex ratios. As such, a female’s ability to plastically adjust her nest sex ratios in response to environmental conditions is constrained, potentially limiting how individuals behaviorally mitigate the effects of environmental change. Given that many loggerhead populations already show female-biased offspring sex ratios, understanding maternal behavioral responses is critical for predicting the future of long-lived species vulnerable to extinction. PMID:27363786

Incubation Temperature Effects on Hatchling Performance in the Loggerhead Sea Turtle (Caretta caretta)

PubMed Central

Fisher, Leah R.; Godfrey, Matthew H.; Owens, David W.

2014-01-01

Incubation temperature has significant developmental effects on oviparous animals, including affecting sexual differentiation for several species. Incubation temperature also affects traits that can influence survival, a theory that is verified in this study for the Northwest Atlantic loggerhead sea turtle (Caretta caretta). We conducted controlled laboratory incubations and experiments to test for an effect of incubation temperature on performance of loggerhead hatchlings. Sixty-eight hatchlings were tested in 2011, and 31 in 2012, produced from eggs incubated at 11 different constant temperatures ranging from 27°C to 33°C. Following their emergence from the eggs, we tested righting response, crawling speed, and conducted a 24-hour long swim test. The results support previous studies on sea turtle hatchlings, with an effect of incubation temperature seen on survivorship, righting response time, crawling speed, change in crawl speed, and overall swim activity, and with hatchlings incubated at 27°C showing decreased locomotor abilities. No hatchlings survived to be tested in both years when incubated at 32°C and above. Differences in survivorship of hatchlings incubated at high temperatures are important in light of projected higher sand temperatures due to climate change, and could indicate increased mortality from incubation temperature effects. PMID:25517114

Pathology and molecular analysis of Hapalotrema mistroides (Digenea: Spirorchiidae) infecting a Mediterranean loggerhead turtle Caretta caretta.

PubMed

Santoro, M; Di Nocera, F; Iaccarino, D; Lawton, S P; Cerrone, A; Degli Uberti, B; D'Amore, M; Affuso, A; Hochscheid, S; Maffucci, F; Galiero, G

2017-04-20

Turtle blood flukes belonging to the family Spirorchiidae (Digenea) represent a major threat for sea turtle health and are considered the most important parasitic cause of turtle stranding and mortality worldwide. Despite the large diversity of spirorchiid species found globally, there are only 2 records for free-ranging Mediterranean sea turtles that date back to the late 1800s involving just Hapalotrema mistroides Monticelli, 1896. This study describes the first fatal confirmed case of spirorchiidiasis in a free-ranging Mediterranean loggerhead turtle Caretta caretta (Linnaeus) and, owing to the complexities of taxonomic identification of these parasites, provides the first molecular characterization and phylogenetic analysis of H. mistroides from the Mediterranean Sea. The loggerhead turtle showed cachexia and digestive disorders associated with severe damage to the pancreas and intestinal ganglia, caused by deposition of Hapalotrema eggs forming granulomas. Massive Hapalotrema egg emboli in several tissues and organs and encephalitis were the most probable contributions to the death of the turtle. The congruence between the phylogenetic analysis of both the ITS2 and 28S rDNA resolved the Italian and USA H. mistroides as the same species, confirming the parasite identification. The case here described clearly indicates that the blood flukes should be considered in the differential diagnosis of Mediterranean sea turtle diseases.

Collecting a sample of loggerhead sea turtle hatchlings before a natural emergence does not reduce nest productivity

USGS Publications Warehouse

Salmon, Michael; Carthy, Raymond R.; Lohmann, Catherine M. F.; Lohmann, Kenneth J.; Wyneken, Jeanette

2012-01-01

 In numerous studies involving hatchling sea turtles, researchers have collected small numbers of hatchlings from nests a few hours before the turtles would otherwise have emerged naturally. This procedure makes it possible to do experiments in which the behavioral or physiological responses of numerous hatchlings must be tested in a limited period of time, and also allows hatchlings to be released back into the sea in time to migrate offshore before dawn. In principle, however, the procedure might inadvertently reduce nest productivity (the number of hatchlings that successfully leave the nest), if digging into a nest prior to emergence somehow reduces the ability of the remaining turtles to emerge. We compared nest productivity in 67 experimental loggerhead nests, from which we removed 10 hatchlings before a natural emergence, to 95 control nests left undisturbed before a natural emergence. The 2 groups showed no statistical differences in productivity. We conclude that taking a few hatchlings from a loggerhead nest shortly before a natural emergence has no negative impact on hatchling production if sampling is done with care at locations where there are few nest predators, and at sites where an emergence can be predicted because nest deposition dates are known.

An Indo-West Pacific `zooxanthella' invasive to the western Atlantic finds its way to the Eastern Pacific via an introduced Caribbean coral

NASA Astrophysics Data System (ADS)

LaJeunesse, Todd C.; Forsman, Zac H.; Wham, Drew C.

2016-06-01

Phylogenetic evidence indicates that Siderastrea glynni, a species of coral thought to be endemic to the Eastern Pacific, is actually more likely to be Si. siderea introduced from the Atlantic. Our analyses of the endosymbionts of Si. glynni ( Symbiodinium) substantiate this as an introduced species; attempts to conserve and list Si. glynni as an endangered species are probably unwarranted. The specimens we examined harbored Symbiodinium trenchii and some also contained Sy. goreaui, symbionts that occur with Si. siderea in the Atlantic. Moreover, the genotype of Sy. trenchii (a single strain defined by ten diallelic microsatellite loci) was genetically distinct from genotypes of Sy. ` glynni,' also in Clade D, found abundantly in colonies of Pocillopora throughout the region. Furthermore, the strain of Sy. trenchii grouped with genotypes from the Greater Caribbean, an inbred population that was recently introduced from the Indo-West Pacific. This secondary introduction suggests that strains of Caribbean Sy. trenchii are capable of dispersal into new reef coral communities where this symbiont does not presently exist.

75 FR 28568 - Takes of Marine Mammals Incidental to Specified Activities; Marine Geophysical Survey in the...

Federal Register 2010, 2011, 2012, 2013, 2014

2010-05-21

.... SUPPLEMENTARY INFORMATION: Background Section 101(a)(5)(D) of the MMPA (16 U.S.C. 1371 (a)(5)(D)) directs the... output and the shape of the frequency spectrum for the single 40-in\\3\\ airgun; thus the predicted safety... under the U.S. Endangered Species Act of 1973 (ESA; 16 U.S.C. 1531 et seq.), including the north Pacific...

Conservation Hotspots for the Turtles on the High Seas of the Atlantic Ocean

PubMed Central

Huang, Hsiang-Wen

2015-01-01

Understanding the distribution of bycaught sea turtles could inform conservation strategies and priorities. This research analyses the distribution of turtles caught as longline fisheries bycatch on the high seas of the Atlantic Ocean. This research collected 18,142 bycatch observations and 47.1 million hooks from large-scale Taiwanese longline vessels in the Atlantic Ocean from June 2002 to December 2013. The coverage rates were ranged from 0.48% to 17.54% by year. Seven hundred and sixty-seven turtles were caught, and the major species were leatherback (59.8%), olive ridley (27.1%) and loggerhead turtles (8.7%). Most olive ridley (81.7%) and loggerhead (82.1%) turtles were hooked, while the leatherbacks were both hooked (44.0%) and entangled (31.8%). Depending on the species, 21.4% to 57.7% were dead when brought onboard. Most of the turtles were caught in tropical areas, especially in the Gulf of Guinea (15°N-10°S, 30°W-10°E), but loggerheads were caught in the south Atlantic Ocean (25°S-35°S, 40°W-10°E and 30°S-40°S, 55°W-45°W). The bycatch rate was the highest at 0.030 per 1000 hooks for leatherbacks in the tropical area. The bycatch rates of olive ridley ranged from 0 to 0.010 per thousand hooks. The loggerhead bycatch rates were higher in the northern and southern Atlantic Ocean and ranged from 0.0128 to 0.0239 per thousand hooks. Due to the characteristics of the Taiwanese deep-set longline fleet, bycatch rates were lower than those of coastal longline fisheries, but mortality rates were higher because of the long hours of operation. Gear and bait modification should be considered to reduce sea turtle bycatch and increase survival rates while reducing the use of shallow hooks would also be helpful. PMID:26267796

Inferring Foraging Areas of Nesting Loggerhead Turtles Using Satellite Telemetry and Stable Isotopes

PubMed Central

Ceriani, Simona A.; Roth, James D.; Evans, Daniel R.; Weishampel, John F.; Ehrhart, Llewellyn M.

2012-01-01

In recent years, the use of intrinsic markers such as stable isotopes to link breeding and foraging grounds of migratory species has increased. Nevertheless, several assumptions still must be tested to interpret isotopic patterns found in the marine realm. We used a combination of satellite telemetry and stable isotope analysis to (i) identify key foraging grounds used by female loggerheads nesting in Florida and (ii) examine the relationship between stable isotope ratios and post-nesting migration destinations. We collected tissue samples for stable isotope analysis from 14 females equipped with satellite tags and an additional 57 untracked nesting females. Telemetry identified three post-nesting migratory pathways and associated non-breeding foraging grounds: (1) a seasonal continental shelf–constrained migratory pattern along the northeast U.S. coastline, (2) a non-breeding residency in southern foraging areas and (3) a residency in the waters adjacent to the breeding area. Isotopic variability in both δ13C and δ15N among individuals allowed identification of three distinct foraging aggregations. We used discriminant function analysis to examine how well δ13C and δ15N predict female post-nesting migration destination. The discriminant analysis classified correctly the foraging ground used for all but one individual and was used to predict putative feeding areas of untracked turtles. We provide the first documentation that the continental shelf of the Mid- and South Atlantic Bights are prime foraging areas for a large number (61%) of adult female loggerheads from the largest loggerhead nesting population in the western hemisphere and the second largest in the world. Our findings offer insights for future management efforts and suggest that this technique can be used to infer foraging strategies and residence areas in lieu of more expensive satellite telemetry, enabling sample sizes that are more representative at the population level. PMID:23028943

Acid-Base and Plasma Biochemical Changes Using Crystalloid Fluids in Stranded Juvenile Loggerhead Sea Turtles (Caretta caretta).

PubMed

Camacho, María; Quintana, María Del Pino; Calabuig, Pascual; Luzardo, Octavio P; Boada, Luis D; Zumbado, Manuel; Orós, Jorge

2015-01-01

The aim of this study was to compare the efficacy and effects on acid-base and electrolyte status of several crystalloid fluids in 57 stranded juvenile loggerhead turtles. Within a rehabilitation program four different crystalloid fluids were administered (0.9% Na Cl solution; 5% dextrose + 0.9% Na Cl solutions 1:1; 0.9% Na Cl + lactated Ringer's solutions 1:1; lactated Ringer's solution). Crystalloid fluids were intracoelomically administered during three days (20 ml/kg/day). Animals were sampled at three different moments: Upon admission for evaluating the type of acid-base or biochemical disorder, post-fluid therapy treatment for controlling the evolution of the disorder, and post-recovery period for obtaining the baseline values for rehabilitated loggerhead turtles. Each sample was analyzed with a portable electronic blood analyzer for pH, pO2, pCO2, lactate, sodium, potassium, chloride, glucose, and BUN concentration. Admission and post-fluid therapy treatment values were compared with those obtained for each turtle immediately before release. The highest percentage of acid-base recovery and electrolyte balance was observed in turtles treated with mixed saline-lactated Ringer's solution (63.6%), followed by turtles treated with physiological saline solution (55%), lactated Ringer's solution (33.3%), and dextrose-saline solutions (10%). Most turtles treated with lactated Ringer's solution had lower lactate concentrations compared with their initial values; however, 66.6% of turtles treated with lactated Ringer's solution had metabolic alkalosis after therapy. Significant higher concentrations of glucose were detected after saline-dextrose administration compared with all the remaining fluids. This is the first study evaluating the effects of several crystalloid fluids on the acid-base status and plasma biochemical values in stranded loggerhead sea turtles. Reference convalescent venous blood gas, acid-base, and plasma biochemical values, useful for veterinary surgeons involved in sea turtle conservation, are also provided.

Conservation hotspots for the turtles on the high seas of the Atlantic Ocean.

PubMed

Huang, Hsiang-Wen

2015-01-01

Understanding the distribution of bycaught sea turtles could inform conservation strategies and priorities. This research analyses the distribution of turtles caught as longline fisheries bycatch on the high seas of the Atlantic Ocean. This research collected 18,142 bycatch observations and 47.1 million hooks from large-scale Taiwanese longline vessels in the Atlantic Ocean from June 2002 to December 2013. The coverage rates were ranged from 0.48% to 17.54% by year. Seven hundred and sixty-seven turtles were caught, and the major species were leatherback (59.8%), olive ridley (27.1%) and loggerhead turtles (8.7%). Most olive ridley (81.7%) and loggerhead (82.1%) turtles were hooked, while the leatherbacks were both hooked (44.0%) and entangled (31.8%). Depending on the species, 21.4% to 57.7% were dead when brought onboard. Most of the turtles were caught in tropical areas, especially in the Gulf of Guinea (15°N-10°S, 30°W-10°E), but loggerheads were caught in the south Atlantic Ocean (25°S-35°S, 40°W-10°E and 30°S-40°S, 55°W-45°W). The bycatch rate was the highest at 0.030 per 1000 hooks for leatherbacks in the tropical area. The bycatch rates of olive ridley ranged from 0 to 0.010 per thousand hooks. The loggerhead bycatch rates were higher in the northern and southern Atlantic Ocean and ranged from 0.0128 to 0.0239 per thousand hooks. Due to the characteristics of the Taiwanese deep-set longline fleet, bycatch rates were lower than those of coastal longline fisheries, but mortality rates were higher because of the long hours of operation. Gear and bait modification should be considered to reduce sea turtle bycatch and increase survival rates while reducing the use of shallow hooks would also be helpful.

Migration, Foraging, and Residency Patterns for Northern Gulf Loggerheads: Implications of Local Threats and International Movements

PubMed Central

Hart, Kristen M.; Lamont, Margaret M.; Sartain, Autumn R.; Fujisaki, Ikuko

2014-01-01

Northern Gulf of Mexico (NGoM) loggerheads (Caretta caretta) make up one of the smallest subpopulations of this threatened species and have declining nest numbers. We used satellite telemetry and a switching state-space model to identify distinct foraging areas used by 59 NGoM loggerheads tagged during 2010–2013. We tagged turtles after nesting at three sites, 1 in Alabama (Gulf Shores; n = 37) and 2 in Florida (St. Joseph Peninsula; n = 20 and Eglin Air Force Base; n = 2). Peak migration time was 22 July to 9 August during which >40% of turtles were in migration mode; the mean post-nesting migration period was 23.0 d (±13.8 d SD). After displacement from nesting beaches, 44 turtles traveled to foraging sites where they remained resident throughout tracking durations. Selected foraging locations were variable distances from tagging sites, and in 5 geographic regions; no turtles selected foraging sites outside the Gulf of Mexico (GoM). Foraging sites delineated using 50% kernel density estimation were located a mean distance of 47.6 km from land and in water with mean depth of −32.5 m; other foraging sites, delineated using minimum convex polygons, were located a mean distance of 43.0 km from land and in water with a mean depth of −24.9 m. Foraging sites overlapped with known trawling activities, oil and gas extraction activities, and the footprint of surface oiling during the 2010 Deepwater Horizon oil spill (n = 10). Our results highlight the year-round use of habitats in the GoM by loggerheads that nest in the NGoM. Our findings indicate that protection of females in this subpopulation requires both international collaborations and management of threats that spatially overlap with distinct foraging habitats. PMID:25076053

Sex determination of Pohnpei Micronesian kingfishers using morphological and molecular genetic techniques

USGS Publications Warehouse

Kesler, Dylan C.; Lopes, I.F.; Haig, Susan M.

2006-01-01

Conservation-oriented studies of Micronesian Kingfishers (Todiramphus cinnamominus) have been hindered by a lack of basic natural history information, despite the status of the Guam subspecies (T. c. cinnamominus) as one of the most endangered species in the world. We used tissue samples and morphometric measures from museum specimens and wild-captured Pohnpei Micronesian Kingfishers (T. c. reichenbachii) to develop methods for sex determination. We present a modified molecular protocol and a discriminant function that yields the probability that a particular individual is male or female. Our results revealed that females were significantly larger than males, and the discriminant function correctly predicted sex in 73% (30/41) of the individuals. The sex of 86% (18/21) of individuals was correctly assigned when a moderate reliability threshold was set. Sex determination using molecular genetic techniques was more reliable than methods based on morphology. Our results will facilitate recovery efforts for the critically endangered Guam Micronesian Kingfisher and provide a basis for sex determination in the 11 other endangered congeners in the Pacific Basin.

Respiratory Microbiome of Endangered Southern Resident Killer Whales and Microbiota of Surrounding Sea Surface Microlayer in the Eastern North Pacific.

PubMed

Raverty, Stephen A; Rhodes, Linda D; Zabek, Erin; Eshghi, Azad; Cameron, Caroline E; Hanson, M Bradley; Schroeder, J Pete

2017-03-24

In the Salish Sea, the endangered Southern Resident Killer Whale (SRKW) is a high trophic indicator of ecosystem health. Three major threats have been identified for this population: reduced prey availability, anthropogenic contaminants, and marine vessel disturbances. These perturbations can culminate in significant morbidity and mortality, usually associated with secondary infections that have a predilection to the respiratory system. To characterize the composition of the respiratory microbiota and identify recognized pathogens of SRKW, exhaled breath samples were collected between 2006-2009 and analyzed for bacteria, fungi and viruses using (1) culture-dependent, targeted PCR-based methodologies and (2) taxonomically broad, non-culture dependent PCR-based methodologies. Results were compared with sea surface microlayer (SML) samples to characterize the respective microbial constituents. An array of bacteria and fungi in breath and SML samples were identified, as well as microorganisms that exhibited resistance to multiple antimicrobial agents. The SML microbes and respiratory microbiota carry a pathogenic risk which we propose as an additional, fourth putative stressor (pathogens), which may adversely impact the endangered SRKW population.

Bioaccumulation of organic pollutants in Indo-Pacific humpback dolphin: A review on current knowledge and future prospects.

PubMed

Sanganyado, Edmond; Rajput, Imran Rashid; Liu, Wenhua

2018-06-01

Indo-Pacific humpback dolphin (Sousa chinensis) are chronically exposed to organic pollutants since they inhabit shallow coastal waters that are often impacted by anthropogenic activities. The aim of this review was to evaluate existing knowledge on the occurrence of organic pollutants in Indo-Pacific humpback dolphins, identify knowledge gaps, and offer recommendations for future research directions. We discussed the trends in the bioaccumulation of organic pollutants in Indo-Pacific humpback dolphins focusing on sources, physicochemical properties, and usage patterns. Furthermore, we examined factors that influence bioaccumulation such as gender, age, dietary intake and tissue-specific distribution. Studies on bioaccumulation in Indo-Pacific humpback dolphin remain scarce, despite high concentrations above 13,000 ng/g lw we previously detected for PFOS, ∑PBDE and chlorinated paraffins. The maximum concentration of organochlorines detected was 157,000 ng/g wt. Furthermore, variations in bioaccumulation were shown to be caused by factors such as usage patterns and physicochemical properties of the pollutant. However, restrictions in sampling inhibit investigations on exposure pathway and toxicity of organic pollutants in Indo-Pacific humpback dolphin. We proposed the use of biopsy sampling, predictive bioaccumulation and toxicity modeling, and monitoring other emerging contaminants such as microplastics and pharmaceuticals for future health risk assessment on this critically endangered marine mammal species. Copyright © 2018 Elsevier Ltd. All rights reserved.

First record of hybridization between green Chelonia mydas and hawksbill Eretmochelys imbricata sea turtles in the Southeast Pacific.

PubMed

Kelez, Shaleyla; Velez-Zuazo, Ximena; Pacheco, Aldo S

2016-01-01

Hybridization among sea turtle species has been widely reported in the Atlantic Ocean, but their detection in the Pacific Ocean is limited to just two individual hybrid turtles, in the northern hemisphere. Herein, we report, for the first time in the southeast Pacific, the presence of a sea turtle hybrid between the green turtle Chelonia mydas and the hawksbill turtle Eretmochelys imbricata. This juvenile sea turtle was captured in northern Peru (4°13'S; 81°10'W) on the 5(th) of January, 2014. The individual exhibited morphological characteristics of C. mydas such as dark green coloration, single pair of pre-frontal scales, four post-orbital scales, and mandibular median ridge, while the presence of two claws in each frontal flipper, and elongated snout resembled the features of E. imbricata. In addition to morphological evidence, we confirmed the hybrid status of this animal using genetic analysis of the mitochondrial gene cytochrome oxidase I, which revealed that the hybrid individual resulted from the cross between a female E. imbricata and a male C. mydas. Our report extends the geographical range of occurrence of hybrid sea turtles in the Pacific Ocean, and is a significant observation of interspecific breeding between one of the world's most critically endangered populations of sea turtles, the east Pacific E. imbricata, and a relatively healthy population, the east Pacific C. mydas.

Predictable hotspots and foraging habitat of the endangered short-tailed albatross (Phoebastria albatrus) in the North Pacific: Implications for conservation

USGS Publications Warehouse

Piatt, John F.; Wetzel, J.; Bell, K.; DeGange, A.R.; Balogh, G.R.; Drew, G.S.; Geernaert, T.; Ladd, C.; Byrd, G.V.

2006-01-01

The short-tailed albatross (Phoebastria albatrus) is a rare and endangered seabird that ranges widely over the northern North Pacific. Populations are slowly recovering but birds face several threats at sea, in particular the incidental capture of birds in long-line fisheries. Conservation efforts are hampered by a lack of information about the at-sea distribution of this species, especially knowledge of where it may predictably co-occur with long-line fishing effort. During 18 years of transiting the Aleutian Islands Unit of the Alaska Maritime National Wildlife Refuge on a research vessel, we observed short-tailed albatross on 65 occasions. They were consistently observed near Ingenstrem Rocks (Buldir Pass) in the western Aleutians and near Seguam Pass in the central Aleutians. Based on the oceanographic characteristics of the locations where we saw most of the birds, we hypothesized that short-tailed albatross “hotspots” were located where tidal currents and steep bottom topography generate strong vertical mixing along the Aleutian Archipelago. As a test of this hypothesis, we analyzed a database containing 1432 opportunistic observations of 2463 short-tailed albatross at sea in the North Pacific. These data showed that short-tailed albatross were closely associated with shelf-edge habitats throughout the northern Gulf of Alaska and Bering Sea. In addition to Ingenstrem Rocks and Seguam Pass, important hotspots for short-tailed albatross in the Aleutians included Near Strait, Samalga Pass, and the shelf-edge south of Umnak/Unalaska islands. In the Bering Sea, hotspots were located along margins of Zhemchug, St. Matthews and Pervenets canyons. Because these short-tailed albatross hotspots are predictable, they are also protectable by regulation of threatening activities at local spatial scales.

Distribution, Abundance, Behavior, and Bioacoustics of Endangered Whales in the Alaskan Beaufort and Eastern Chukchi Seas, 1979-86.

DTIC Science & Technology

1987-07-01

gray whales (Eschrichtius robustus) were apparently displaced from a wintering breeding lagoon off Baja California, Mexico, by increased ship traffic...human activities have been thought to impact whale distribution include the breeding and feeding areas of north Pacific humpback whales (Megaptera...seasonal or periodic (mass) movement of animals away from and back to their breeding areas, and typically precedes and follows breeding seasons

Status and conservation of coral reefs in Costa Rica.

PubMed

Cortés, Jorge; Jiménez, Carlos E; Fonseca, Ana C; Alvarado, Juan José

2010-05-01

Costa Rica has coral communities and reefs on the Caribbean coast and on the Pacific along the coast and off-shore islands. The Southern section of the Caribbean coast has fringing and patch reefs, carbonate banks, and an incipient algal ridge. The Pacific coast has coral communities, reefs and isolated coral colonies. Coral reefs have been seriously impacted in the last 30 years, mainly by sediments (Caribbean coast and some Pacific reefs) and by El Niño warming events (both coasts). Monitoring is being carried out at three sites on each coast. Both coasts suffered significant reductions in live coral cover in the 1980's, but coral cover is now increasing in most sites. The government of Costa Rica is aware of the importance of coral reefs and marine environments in general, and in recent years decrees have been implemented (or are in the process of approval) to protect them, but limited resources endanger their proper management and conservation, including proper outreach to reef users and the general public.

Radiographic features of the limbs of juvenile and subadult loggerhead sea turtles (Caretta caretta)

PubMed Central

Valente, Ana Luisa; Marco, Ignasi; Zamora, Maria Angeles; Parga, Maria Luz; Lavín, Santiago; Alegre, Ferran; Cuenca, Rafaela

2007-01-01

This study aimed to provide the normal radiographic anatomic appearance of the limbs of the loggerhead sea turtle, Caretta caretta. Dorsopalmar and dorsoplantar radiographs were taken of the forelimbs and hindlimbs of 15 juvenile and 15 subadult loggerhead sea turtles, 17 alive and 13 dead. For comparison, computed tomographic, gross anatomic, osteologic, and histologic studies were performed on the limbs of 5 of the sea turtles. Bones from the distal part of the fore and hind flippers were seen in detail with a mammographic film–screen combination. The pectoral and pelvic girdles, superimposed by the carapace, were better seen on standard radiographs with the use of rare-earth intensifying screens. Mammographic radiographs of the manus of 5 small juvenile turtles showed active growth zones. Visualization of bone contours in the distal part of the limbs was clearer than in mammals owing to the very few superimpositions. The presence of a substantial amount of cartilage in the epiphyses produced better visibility of limb ends. We conclude that use of a mammography film–screen combination is the best way to evaluate the bony and joint structures of the limbs of sea turtles. Radiography provides reliable images for clinical purposes. Considering the low cost and logistics of this technique, it is a practical ancillary test for marine animal rehabilitation centers to use. PMID:17955906

Fusarium solani is responsible for mass mortalities in nests of loggerhead sea turtle, Caretta caretta, in Boavista, Cape Verde.

PubMed

Sarmiento-Ramírez, Jullie M; Abella, Elena; Martín, María P; Tellería, María T; López-Jurado, Luis F; Marco, Adolfo; Diéguez-Uribeondo, Javier

2010-11-01

The fungus Fusarium solani (Mart.) Saccardo (1881) was found to be the cause of infections in the eggs of the sea turtle species Caretta caretta in Boavista Island, Cape Verde. Egg shells with early and severe symptoms of infection, as well as diseased embryos were sampled from infected nests. Twenty-five isolates with similar morphological characteristics were obtained. Their ITS rRNA gene sequences were similar to the GenBank sequences corresponding to F. solani and their maximum identity ranged from 95% to 100%. Phylogenetic parsimony and Bayesian analyses of these isolates showed that they belong to a single F. solani clade and that they are distributed in two subclades named A and C (the latter containing 23 out of 25). A representative isolate of subclade C was used in challenge inoculation experiments to test Koch postulates. Mortality rates were c. 83.3% in challenged eggs and 8.3% in the control. Inoculated challenged eggs exhibited the same symptoms as infected eggs found in the field. Thus, this work demonstrates that a group of strains of F. solani are responsible for the symptoms observed on turtle-nesting beaches, and that they represent a risk for the survival of this endangered species. © 2010 Federation of European Microbiological Societies. Published by Blackwell Publishing Ltd. All rights reserved.

Study of the effects of oil on marine turtles. Volume 3. Appendices. Final report, 30 September 1983-1 October 1985

DOE Office of Scientific and Technical Information (OSTI.GOV)

Vargo, S.; Lutz, P.; Odell, D.

1986-09-15

The objective of the study was to determine the effects of oil on marine turtles. An experimental program was carried out on 3-20 month old loggerhead and 3-16 month old green turtles to determine behavioral and physiological effects of oil using South Louisiana Crude Oil (SLCO) preweathered for 48 hrs. The behavioral experiments indicated that both species of marine turtles had a limited ability to avoid oil slicks, but experiments to determine avoidance/attraction to floating tar balls were inconclusive. The physiological experiments showed that the respiration, skin, some aspects of blood chemistry and composition, and salt gland function of 15-18more » month old loggerhead sea turtles were significantly affected.« less

Study of the effects of oil on marine turtles. Volume 1. Executive summary. Final report, 30 September 1983-1 October 1985

DOE Office of Scientific and Technical Information (OSTI.GOV)

Vargo, S.; Lutz, P.; Odell, D.

1986-09-15

The objective of the study was to determine the effects of oil on marine turtles. An experimental program was carried out on 3-20 month old loggerhead and 3-16 month old green turtles to determine behavioral and physiological effects of oil using South Louisiana Crude Oil (SLCO) preweathered for 48 hrs. The behavioral experiments indicated that both species of marine turtles had a limited ability to avoid oil slicks, but experiments to determine avoidance/attraction to floating tar balls were inconclusive. The physiological experiments showed that the respiration, skin, some aspects of blood chemistry and composition, and salt gland function of 15-18more » month old loggerhead sea turtles were significantly affected.« less

Sex ratio estimations of loggerhead sea turtle hatchlings at Kuriat islands, Tunisia: can minor nesting sites contribute to compensate globally female-biased sex ratio?

PubMed

Jribi, Imed; Bradai, Mohamed Nejmeddine

2014-01-01

Hatchling sex ratios in the loggerhead turtle Caretta caretta were estimated by placing electronic temperature recorders in seven nests at Kuriat islands (Tunisia) during the 2013 nesting season. Based on the mean temperatures during the middle third of the incubation period, and on incubation duration, the sex ratio of hatchlings at Kuriat islands was highly male-biased. Presently, the majority of hatchling sex ratio studies are focused on major nesting areas, whereby the sex ratios are universally believed to be heavily female-biased. Here we present findings from a minor nesting site in the Mediterranean, where the hatchling sex ratio was found to be male-biased, suggesting a potential difference between major and minor nesting sites.

The magnetic map of hatchling loggerhead sea turtles.

PubMed

Lohmann, Kenneth J; Putman, Nathan F; Lohmann, Catherine M F

2012-04-01

Young loggerhead sea turtles (Caretta caretta) from eastern Florida, U.S.A., undertake a transoceanic migration in which they gradually circle the North Atlantic Ocean before returning to the North American coast. Hatchlings in the open sea are guided at least partly by a 'magnetic map' in which regional magnetic fields function as navigational markers and elicit changes in swimming direction at crucial locations along the migratory route. The magnetic map exists in turtles that have never migrated and thus appears to be inherited. Turtles derive both longitudinal and latitudinal information from the Earth's field, most likely by exploiting unique combinations of field inclination and intensity that occur in different geographic areas. Similar mechanisms may function in the migrations of diverse animals. Copyright © 2011 Elsevier Ltd. All rights reserved.

Loggerhead sea turtles (Caretta caretta): A target species for monitoring litter ingested by marine organisms in the Mediterranean Sea.

PubMed

Matiddi, Marco; Hochsheid, Sandra; Camedda, Andrea; Baini, Matteo; Cocumelli, Cristiano; Serena, Fabrizio; Tomassetti, Paolo; Travaglini, Andrea; Marra, Stefano; Campani, Tommaso; Scholl, Francesco; Mancusi, Cecilia; Amato, Ezio; Briguglio, Paolo; Maffucci, Fulvio; Fossi, Maria Cristina; Bentivegna, Flegra; de Lucia, Giuseppe Andrea

2017-11-01

Marine litter is any persistent, manufactured or processed solid material discarded, disposed of or abandoned in the marine and coastal environment. Ingestion of marine litter can have lethal and sub-lethal effects on wildlife that accidentally ingests it, and sea turtles are particularly susceptible to this threat. The European Commission drafted the 2008/56/EC Marine Strategy Framework Directive with the aim to achieve a Good Environmental Status (GES), and the loggerhead sea turtle (Caretta caretta, Linnaeus 1758) was selected for monitoring the amount and composition of litter ingested by marine animals. An analogous decision has been made under the UNEP/MAP Barcelona Convention for the protection of the Mediterranean Sea, following the Ecosystem Approach. This work provides for the first time, two possible scenarios for the Marine Strategy Framework Directive GES, both related to "Trends in the amount and composition of litter ingested by marine animals" in the Mediterranean Sea. The study validates the use of the loggerhead turtle as target indicator for monitoring the impact of litter on marine biota and calls for immediate use of this protocol throughout the Mediterranean basin and European Region. Both GES scenarios are relevant worldwide, where sea turtles and marine litter are present, for measuring the impact of ingested plastics and developing policy strategies to reduce it. In the period between 2011 and 2014, 150 loggerhead sea turtles, found dead, were collected from the Italian Coast, West Mediterranean Sea Sub-Region. The presence of marine litter was investigated using a standardized protocol for necropsies and lab analysis. The collected items were subdivided into 4 main categories, namely, IND-Industrial plastic, USE-User plastic, RUB-Non plastic rubbish, POL-Pollutants and 14 sub-categories, to detect local diversity. Eighty-five percent of the individuals considered (n = 120) were found to have ingested an average of 1.3 ± 0.2 g of litter (dry mass) or 16 ± 3 items. Copyright © 2017 Elsevier Ltd. All rights reserved.

Causes of Stranding and Mortality, and Final Disposition of Loggerhead Sea Turtles (Caretta caretta) Admitted to a Wildlife Rehabilitation Center in Gran Canaria Island, Spain (1998-2014): A Long-Term Retrospective Study

PubMed Central

Orós, Jorge; Montesdeoca, Natalia; Camacho, María; Arencibia, Alberto; Calabuig, Pascual

2016-01-01

Aims The aims of this study were to analyze the causes of stranding of 1,860 loggerhead turtles (Caretta caretta) admitted at the Tafira Wildlife Rehabilitation Center in Gran Canaria Island, Spain, from 1998 to 2014, and to analyze the outcomes of the rehabilitation process to allow meaningful auditing of its quality. Methods Primary causes of morbidity were classified into seven categories: entanglement in fishing gear and/or plastics, ingestion of hooks and monofilament lines, trauma, infectious disease, crude oil, other causes, and unknown/undetermined. Final dispositions were calculated as euthanasia (Er), unassisted mortality (Mr), and release (Rr) rates. Time to death (Td) for euthanized and dead turtles, and length of stay for released (Tr) turtles were evaluated. Results The most frequent causes of morbidity were entanglement in fishing gear and/or plastics (50.81%), unknown/undetermined (20.37%), and ingestion of hooks (11.88%). The final disposition of the 1,634 loggerhead turtles admitted alive were: Er = 3.37%, Mr = 10.34%, and Rr = 86.29%. Er was significantly higher in the trauma category (18.67%) compared to the other causes of admission. The highest Mr was observed for turtles admitted due to trauma (30.67%). The highest Rr was observed in the crude oil (93.87%) and entanglement (92.38%) categories. The median Tr ranged from 12 days (unknown) to 70 days (trauma). Conclusions This survey is the first large-scale epidemiological study on causes of stranding and mortality of Eastern Atlantic loggerheads and demonstrates that at least 71.72% of turtles stranded due to anthropogenic causes. The high Rr (86.29%) emphasizes the importance of marine rehabilitation centers for conservation purposes. The stratified analysis by causes of admission of the three final disposition rates, and the parameters Td and Tr should be included in the outcome research of the rehabilitation process of sea turtles in order to allow comparative studies between marine rehabilitation centers around the world. PMID:26901623

Causes of Stranding and Mortality, and Final Disposition of Loggerhead Sea Turtles (Caretta caretta) Admitted to a Wildlife Rehabilitation Center in Gran Canaria Island, Spain (1998-2014): A Long-Term Retrospective Study.

PubMed

Orós, Jorge; Montesdeoca, Natalia; Camacho, María; Arencibia, Alberto; Calabuig, Pascual

2016-01-01

The aims of this study were to analyze the causes of stranding of 1,860 loggerhead turtles (Caretta caretta) admitted at the Tafira Wildlife Rehabilitation Center in Gran Canaria Island, Spain, from 1998 to 2014, and to analyze the outcomes of the rehabilitation process to allow meaningful auditing of its quality. Primary causes of morbidity were classified into seven categories: entanglement in fishing gear and/or plastics, ingestion of hooks and monofilament lines, trauma, infectious disease, crude oil, other causes, and unknown/undetermined. Final dispositions were calculated as euthanasia (Er), unassisted mortality (Mr), and release (Rr) rates. Time to death (Td) for euthanized and dead turtles, and length of stay for released (Tr) turtles were evaluated. The most frequent causes of morbidity were entanglement in fishing gear and/or plastics (50.81%), unknown/undetermined (20.37%), and ingestion of hooks (11.88%). The final disposition of the 1,634 loggerhead turtles admitted alive were: Er = 3.37%, Mr = 10.34%, and Rr = 86.29%. Er was significantly higher in the trauma category (18.67%) compared to the other causes of admission. The highest Mr was observed for turtles admitted due to trauma (30.67%). The highest Rr was observed in the crude oil (93.87%) and entanglement (92.38%) categories. The median Tr ranged from 12 days (unknown) to 70 days (trauma). This survey is the first large-scale epidemiological study on causes of stranding and mortality of Eastern Atlantic loggerheads and demonstrates that at least 71.72% of turtles stranded due to anthropogenic causes. The high Rr (86.29%) emphasizes the importance of marine rehabilitation centers for conservation purposes. The stratified analysis by causes of admission of the three final disposition rates, and the parameters Td and Tr should be included in the outcome research of the rehabilitation process of sea turtles in order to allow comparative studies between marine rehabilitation centers around the world.

Perspectives on the landmark decision designating the northern spotted owl ( Strix occidentalis caurina) as a threatened subspecies

NASA Astrophysics Data System (ADS)

Franzreb, Kathleen E.

1993-07-01

Following an extensive legal battle challenging its original decision to not extend the protection of the Endangered Species Act to the northern spotted owl ( Strix occidentalis caurina), the US Fish and Wildlife Service was ordered by the 9th District Court of Appeals to reassess the status of the owl. As a result of the revised analysis, the service proposed the northern spotted owl for threatened status throughout its range. Because of the complex biological issues involved and the perceived potential for economic disruption in timber-dependent communities of the Pacific Northwest, this proposal generated more controversy and interest than any previous one. In this article I discuss the rationale for the service’s decision, public involvement in the process, and the mechanisms now available to conserve the northern spotted owl and its habitat under the Endangered Species Act.

78 FR 61505 - Endangered and Threatened Wildlife and Plants; Designation of Critical Habitat for Taylor's...

Federal Register 2010, 2011, 2012, 2013, 2014

2013-10-03

...We, the U.S. Fish and Wildlife Service, designate critical habitat for the Taylor's checkerspot butterfly (Euphydryas editha taylori) and streaked horned lark (Eremophila alpestris strigata) under the Endangered Species Act of 1973, as amended (Act). In total, approximately 1,941 acres (786 hectares) in Island, Clallam, and Thurston Counties in Washington, and in Benton County in Oregon, fall within the boundaries of the critical habitat designation for Taylor's checkerspot butterfly. Approximately 4,629 acres (1,873 hectares) in Grays Harbor, Pacific, and Wahkiakum Counties in Washington, and in Clatsop, Columbia, Marion, Polk, and Benton Counties in Oregon, fall within the boundaries of the critical habitat designation for streaked horned lark. The effect of this regulation is to designate critical habitat for the Taylor's checkerspot butterfly and streaked horned lark under the Act for the conservation of the species.

Phylogeography, Genetic Diversity, and Management Units of Hawksbill Turtles in the Indo-Pacific

PubMed Central

Jensen, Michael P.; Ho, Simon Y. W.; Mobaraki, Asghar; Broderick, Damien; Mortimer, Jeanne A.; Whiting, Scott D.; Miller, Jeff; Prince, Robert I. T.; Bell, Ian P.; Hoenner, Xavier; Limpus, Colin J.; Santos, Fabrício R.; FitzSimmons, Nancy N.

2016-01-01

Hawksbill turtle (Eretmochelys imbricata) populations have experienced global decline because of a history of intense commercial exploitation for shell and stuffed taxidermied whole animals, and harvest for eggs and meat. Improved understanding of genetic diversity and phylogeography is needed to aid conservation. In this study, we analyzed the most geographically comprehensive sample of hawksbill turtles from the Indo-Pacific Ocean, sequencing 766bp of the mitochondrial control region from 13 locations (plus Aldabra, n = 4) spanning over 13500 km. Our analysis of 492 samples revealed 52 haplotypes distributed in 5 divergent clades. Diversification times differed between the Indo-Pacific and Atlantic lineages and appear to be related to the sea-level changes that occurred during the Last Glacial Maximum. We found signals of demographic expansion only for turtles from the Persian Gulf region, which can be tied to a more recent colonization event. Our analyses revealed evidence of transoceanic migration, including connections between feeding grounds from the Atlantic Ocean and Indo-Pacific rookeries. Hawksbill turtles appear to have a complex pattern of phylogeography, showing a weak isolation by distance and evidence of multiple colonization events. Our novel dataset will allow mixed-stock analyses of hawksbill turtle feeding grounds in the Indo-Pacific by providing baseline data needed for conservation efforts in the region. Eight management units are proposed in our study for the Indo-Pacific region that can be incorporated in conservation plans of this critically endangered species. PMID:26615184

Study of the effects of oil on marine turtles. Volume 2. Technical report. Final report, 30 September 1983-1 October 1985

DOE Office of Scientific and Technical Information (OSTI.GOV)

Vargo, S.; Lutz, P.; Odell, D.

1986-09-15

The objective of the study was to determine the effects of oil on marine turtles. An experimental program was carried out on 3-20 month old loggerhead and 3-16 month old green turtles to determine behavioral and physiological effects of oil using South Louisiana Crude Oil (SLCO) preweathered for 48 hrs. The behavioral experiments indicated that both species of marine turtles had a limited ability to avoid oil slicks, but experiments to determine avoidance/attraction to floating tar balls were inconclusive. The physiological experiments showed that the respiration, skin, some aspects of blood chemistry and composition, and salt gland function of 15-18more » month old loggerhead sea turtles were significantly affected. Spills in the vicinity of nesting beaches are of special concern.« less

a Continual Engagement Approach Through Gis-Mcda Conflict Resolution of Loggerhead Sea Turtle Bycatch in Mexico

NASA Astrophysics Data System (ADS)

Bojórquez-Tapia, L. A.

2015-12-01

Continual engagement is an approach that emphasizes of uninterrupted interaction with the stakeholders with the purpose of fully integrating their knowledge into policymaking process. It focuses on the creation of hybrid scientific-local knowledge highly relevant to community and policy makers needs, while balancing the power asymmetries among stakeholders. Hence, it presupposes a capacity for a continuous revision and adjustment of the analyses that support the policymaking process. While continual engagement implies a capacity for enabling an effective communication, translation and mediation of knowledge among the diverse stakeholders, experts and policymakers, it also means keeping a close eye out for how knowledge evolves and how new data and information is introduced along a policymaking process. Through a case study, the loggerhead sea turtle (Caretta caretta) fishing bycatch in Mexico, a geographical information system-multicriteria modeling (GIS-MCDA) approach is presented to address the challenges of implementing continual engagement in conflict resolution processes. The GIS-MCDA combined the analytical hierarchy process (AHP) and compromise programming (CP) to generate consensus regarding the spatial pattern of conflicts. The AHP was fundamental for synthesizing the different sources of knowledge into a geospatial model. In particular, the AHP enabled the assess the salience, legitimacy, and credibility of the information produced for all involved. Results enabled the development of specific policies based upon an assessment of the risk of the loggerhead population to different levels of fishing bycatch, and the needs of the fishing communities in the region.

The Impact of Turtle Excluder Devices and Fisheries Closures on Loggerhead and Kemp's Ridley Strandings in the Western Gulf of Mexico

USGS Publications Warehouse

Lewison, R.L.; Crowder, L.B.; Shaver, D.J.

2003-01-01

The Sea Turtle Stranding and Salvage Network has been monitoring turtle strandings for more than 20 years in the United States. High numbers of strandings in the early to mid-1980s prompted regulations to require turtle excluder devices (TEDs) on shrimping vessels (trawlers). Following year-round TED implementation in 1991, however, stranding levels in the Gulf of Mexico increased. We evaluated the efficacy of TEDs and other management actions (e.g., fisheries closures) on loggerhead (Caretta caretta) and Kemp's ridley (Lepidochelys kempii) turtle populations by analyzing a long-term, stranding data set from the western Gulf of Mexico. Our analyses suggest that both sea turtle population growth and shrimping activity have contributed to the observed increase in strandings. Compliance with regulations requiring turtle excluder devices was a significant factor in accounting for annual stranding variability: low compliance was correlated with high levels of strandings. Our projections suggest that improved compliance with TED regulations will reduce strandings to levels that, in conjunction with other protective measures, should promote population recoveries for loggerhead and Kemp's ridley turtles. Local, seasonal fisheries closures, concurrent with TED enforcement, could reduce strandings to even lower levels. A seasonal closure adjacent to a recently established Kemp's ridley nesting beach may also reduce mortality of nesting adults and thus promote long-term population persistence by fostering the establishment of a robust secondary nesting site.

Massive Consumption of Gelatinous Plankton by Mediterranean Apex Predators

PubMed Central

Cardona, Luis; Álvarez de Quevedo, Irene; Borrell, Assumpció; Aguilar, Alex

2012-01-01

Stable isotopes of carbon and nitrogen were used to test the hypothesis that stomach content analysis has systematically overlooked the consumption of gelatinous zooplankton by pelagic mesopredators and apex predators. The results strongly supported a major role of gelatinous plankton in the diet of bluefin tuna (Thunnus thynnus), little tunny (Euthynnus alletteratus), spearfish (Tetrapturus belone) and swordfish (Xiphias gladius). Loggerhead sea turtles (Caretta caretta) in the oceanic stage and ocean sunfish (Mola mola) also primarily relied on gelatinous zooplankton. In contrast, stable isotope ratios ruled out any relevant consumption of gelatinous plankton by bluefish (Pomatomus saltatrix), blue shark (Prionace glauca), leerfish (Lichia amia), bonito (Sarda sarda), striped dolphin (Stenella caerueloalba) and loggerhead sea turtles (Caretta caretta) in the neritic stage, all of which primarily relied on fish and squid. Fin whales (Balaenoptera physalus) were confirmed as crustacean consumers. The ratios of stable isotopes in albacore (Thunnus alalunga), amberjack (Seriola dumerili), blue butterfish (Stromaeus fiatola), bullet tuna (Auxis rochei), dolphinfish (Coryphaena hyppurus), horse mackerel (Trachurus trachurus), mackerel (Scomber scombrus) and pompano (Trachinotus ovatus) were consistent with mixed diets revealed by stomach content analysis, including nekton and crustaceans, but the consumption of gelatinous plankton could not be ruled out completely. In conclusion, the jellyvorous guild in the Mediterranean integrates two specialists (ocean sunfish and loggerhead sea turtles in the oceanic stage) and several opportunists (bluefin tuna, little tunny, spearfish, swordfish and, perhaps, blue butterfish), most of them with shrinking populations due to overfishing. PMID:22470416

Massive consumption of gelatinous plankton by Mediterranean apex predators.

PubMed

Cardona, Luis; Álvarez de Quevedo, Irene; Borrell, Assumpció; Aguilar, Alex

2012-01-01

Stable isotopes of carbon and nitrogen were used to test the hypothesis that stomach content analysis has systematically overlooked the consumption of gelatinous zooplankton by pelagic mesopredators and apex predators. The results strongly supported a major role of gelatinous plankton in the diet of bluefin tuna (Thunnus thynnus), little tunny (Euthynnus alletteratus), spearfish (Tetrapturus belone) and swordfish (Xiphias gladius). Loggerhead sea turtles (Caretta caretta) in the oceanic stage and ocean sunfish (Mola mola) also primarily relied on gelatinous zooplankton. In contrast, stable isotope ratios ruled out any relevant consumption of gelatinous plankton by bluefish (Pomatomus saltatrix), blue shark (Prionace glauca), leerfish (Lichia amia), bonito (Sarda sarda), striped dolphin (Stenella caerueloalba) and loggerhead sea turtles (Caretta caretta) in the neritic stage, all of which primarily relied on fish and squid. Fin whales (Balaenoptera physalus) were confirmed as crustacean consumers. The ratios of stable isotopes in albacore (Thunnus alalunga), amberjack (Seriola dumerili), blue butterfish (Stromaeus fiatola), bullet tuna (Auxis rochei), dolphinfish (Coryphaena hyppurus), horse mackerel (Trachurus trachurus), mackerel (Scomber scombrus) and pompano (Trachinotus ovatus) were consistent with mixed diets revealed by stomach content analysis, including nekton and crustaceans, but the consumption of gelatinous plankton could not be ruled out completely. In conclusion, the jellyvorous guild in the Mediterranean integrates two specialists (ocean sunfish and loggerhead sea turtles in the oceanic stage) and several opportunists (bluefin tuna, little tunny, spearfish, swordfish and, perhaps, blue butterfish), most of them with shrinking populations due to overfishing.

Spatial distribution of loggerhead turtle (Caretta caretta) emergences along a highly dynamic beach in the northern Gulf of Mexico

USGS Publications Warehouse

Lamont, Margaret M.; Houser, Chris

2014-01-01

As coastlines change due to sea level rise and an increasing human presence, understanding how species, such as marine turtles, respond to alterations in habitat is necessary for proper management and conservation. Survey data from a major nesting beach in the northern Gulf of Mexico, where a revetment was installed, was used to assess spatial distribution of loggerhead emergences. Through use of Quadrat analysis and piecewise linear regression with breakpoint, we present evidence to suggest that nest site selection in loggerheads is determined in the nearshore environment, and by characteristics such as wave height, alongshore currents, depth and patterns of erosion and accretion. Areas of relatively dense nesting were found in areas with relatively strong alongshore currents, relatively small waves, a steep offshore slope and the largest historical rates of erosion. Areas of relatively dense nesting also corresponded to areas of low nesting success. Both nesting and non-nesting emergences were clustered immediately adjacent to the revetment and at other eroding sites along the beach. These results suggest that alterations to the nearshore environment from activities such as construction of a jetty, dredging or installation of pilings, may impact sea turtle nest distribution alongshore. We also show that piecewise linear regression with breakpoint is a technique that can be used with geomorphological and oceanographic data to predict locations of nest clumping and may be useful for managers at other nesting beaches.

Biomarkers reveal sea turtles remained in oiled areas following the Deepwater Horizon oil spill

USGS Publications Warehouse

Vander Zanden, Hannah B.; Bolten, Alan B.; Tucker, Anton D.; Hart, Kristen M.; Lamont, Margaret M.; Fujisaki, Ikuko; Reich, Kimberly J.; Addison, David S.; Mansfield, Katherine L.; Phillips, Katrina F.; Pajuelo, Mariela; Bjorndal, Karen A.

2016-01-01

Assessments of large-scale disasters, such as the Deepwater Horizon oil spill, are problematic because while measurements of post-disturbance conditions are common, measurements of pre-disturbance baselines are only rarely available. Without adequate observations of pre-disaster organismal and environmental conditions, it is impossible to assess the impact of such catastrophes on animal populations and ecological communities. Here, we use long-term biological tissue records to provide pre-disaster data for a vulnerable marine organism. Keratin samples from the carapace of loggerhead sea turtles record the foraging history for up to 18 years, allowing us to evaluate the effect of the oil spill on sea turtle foraging patterns. Samples were collected from 76 satellite-tracked adult loggerheads in 2011 and 2012, approximately one to two years after the spill. Of the 10 individuals that foraged in areas exposed to surface oil, none demonstrated significant changes in foraging patterns post spill. The observed long-term fidelity to foraging sites indicates that loggerheads in the northern Gulf of Mexico likely remained in established foraging sites, regardless of the introduction of oil and chemical dispersants. More research is needed to address potential long-term health consequences to turtles in this region. Mobile marine organisms present challenges for researchers to monitor effects of environmental disasters, both spatially and temporally. We demonstrate that biological tissues can reveal long-term histories of animal behavior and provide critical pre-disaster baselines following an anthropogenic disturbance or natural disaster.

Proceedings from the Pacific Islands Region Threatened, Endangered, and At-Risk Species Workshop held 6-8 Jun 2006 in Honolulu, Hawaii

DTIC Science & Technology

2006-06-01

Questions • Ecosystem Management • Impacts of NIS on TER-S • Synthesis and Prioritization of Aquatic and Terrestrial Issues • Technology Transfer ii... impacts of these threats and their consequences to the forest ecosystem . He further stated that the lack of public education about the value of...It is also possible to look at adaptive management as an experimental approach to better understand ecosystem processes and the impact of

Intrapopulation variability in the timing of ontogenetic habitat shifts in sea turtles revealed using δ15N values from bone growth rings

PubMed Central

Turner Tomaszewicz, Calandra N.; Seminoff, Jeffrey A.; Peckham, S. Hoyt; Avens, Larisa; Kurle, Carolyn M.

2016-01-01

Summary Determining location and timing of ontogenetic shifts in the habitat use of highly migratory species, along with possible intrapopulation variation in these shifts, is essential for understanding mechanisms driving alternate life histories and assessing overall population trends. Measuring variations in multi-year habitat use patterns is especially difficult for remote oceanic species.To investigate the potential for differential habitat use among migratory marine vertebrates, we measured the naturally occurring stable nitrogen isotope (δ15N) patterns that differentiate distinct ocean regions to create a “regional isotope characterization”, analyzed the δ15N values from annual bone growth layer rings from dead-stranded animals, then combined the bone and regional isotope data to track individual animal movement patterns over multiple years.We used humeri from juvenile North Pacific loggerhead turtles (Caretta caretta), animals that undergo long migrations across the North Pacific Ocean (NPO), using multiple discrete regions as they develop to adulthood. Typical of many migratory marine species, ontogenetic changes in habitat use throughout their decades-long juvenile stage is poorly understood, but each potential habitat has unique foraging opportunities and spatially explicit natural and anthropogenic threats that could affect key life history parameters.We found a bimodal size/age distribution in the timing that juveniles underwent an ontogenetic habitat shift from the oceanic central North Pacific (CNP) to the neritic east Pacific region near the Baja California Peninsula (BCP) (42.7±7.2 vs. 68.3±3.4 cm carapace length, 7.5±2.7 vs. 15.6±1.7 years). Important to the survival of this population, these disparate habitats differ considerably in their food availability, energy requirements, and threats, and these differences can influence life history parameters such as growth, survival, and future fecundity. This is the first evidence of alternative ontogenetic shifts and habitat use patterns for juveniles foraging in the eastern NPO.We combine two techniques, skeletochronology and stable isotope analysis, to reconstruct multi-year habitat use patterns of a remote migratory species, linked to estimated ages and body sizes of individuals, to reveal variable ontogeny during the juvenile life stage that could drive alternate life histories and that has the potential to illuminate the migration patterns for other species with accretionary tissues. PMID:28075017

Direct sequencing of mitochondrial DNA detects highly divergent haplotypes in blue marlin (Makaira nigricans).

PubMed

Finnerty, J R; Block, B A

1992-06-01

We were able to differentiate between species of billfish (Istiophoridae family) and to detect considerable intraspecific variation in the blue marlin (Makaira nigricans) by directly sequencing a polymerase chain reaction (PCR)-amplified, 612-bp fragment of the mitochondrial cytochrome b gene. Thirteen variable nucleotide sites separated blue marlin (n = 26) into 7 genotypes. On average, these genotypes differed by 5.7 base substitutions. A smaller sample of swordfish from an equally broad geographic distribution displayed relatively little intraspecific variation, with an average of 1.3 substitutions separating different genotypes. A cladistic analysis of blue marlin cytochrome b variants indicates two major divergent evolutionary lines within the species. The frequencies of these two major evolutionary lines differ significantly between Atlantic and Pacific ocean basins. This finding is important given that the Atlantic stocks of blue marlin are considered endangered. Migration from the Pacific can help replenish the numbers of blue marlin in the Atlantic, but the loss of certain mitochondrial DNA haplotypes in the Atlantic due to overfishing probably could not be remedied by an influx of Pacific fish because of their absence in the Pacific population. Fishery management strategies should attempt to preserve the genetic diversity within the species. The detection of DNA sequence polymorphism indicates the utility of PCR technology in pelagic fishery genetics.

Estimating Historical Eastern North Pacific Blue Whale Catches Using Spatial Calling Patterns

PubMed Central

Monnahan, Cole C.; Branch, Trevor A.; Stafford, Kathleen M.; Ivashchenko, Yulia V.; Oleson, Erin M.

2014-01-01

Blue whales (Balaenoptera musculus) were exploited extensively around the world and remain endangered. In the North Pacific their population structure is unclear and current status unknown, with the exception of a well-studied eastern North Pacific (ENP) population. Despite existing abundance estimates for the ENP population, it is difficult to estimate pre-exploitation abundance levels and gauge their recovery because historical catches of the ENP population are difficult to separate from catches of other populations in the North Pacific. We collated previously unreported Soviet catches and combined these with known catches to form the most current estimates of North Pacific blue whale catches. We split these conflated catches using recorded acoustic calls from throughout the North Pacific, the knowledge that the ENP population produces a different call than blue whales in the western North Pacific (WNP). The catches were split by estimating spatiotemporal occurrence of blue whales with generalized additive models fitted to acoustic call patterns, which predict the probability a catch belonged to the ENP population based on the proportion of calls of each population recorded by latitude, longitude, and month. When applied to the conflated historical catches, which totaled 9,773, we estimate that ENP blue whale catches totaled 3,411 (95% range 2,593 to 4,114) from 1905–1971, and amounted to 35% (95% range 27% to 42%) of all catches in the North Pacific. Thus most catches in the North Pacific were for WNP blue whales, totaling 6,362 (95% range 5,659 to 7,180). The uncertainty in the acoustic data influence the results substantially more than uncertainty in catch locations and dates, but the results are fairly insensitive to the ecological assumptions made in the analysis. The results of this study provide information for future studies investigating the recovery of these populations and the impact of continuing and future sources of anthropogenic mortality. PMID:24892427

Estimating historical eastern North Pacific blue whale catches using spatial calling patterns.

PubMed

Monnahan, Cole C; Branch, Trevor A; Stafford, Kathleen M; Ivashchenko, Yulia V; Oleson, Erin M

2014-01-01

Blue whales (Balaenoptera musculus) were exploited extensively around the world and remain endangered. In the North Pacific their population structure is unclear and current status unknown, with the exception of a well-studied eastern North Pacific (ENP) population. Despite existing abundance estimates for the ENP population, it is difficult to estimate pre-exploitation abundance levels and gauge their recovery because historical catches of the ENP population are difficult to separate from catches of other populations in the North Pacific. We collated previously unreported Soviet catches and combined these with known catches to form the most current estimates of North Pacific blue whale catches. We split these conflated catches using recorded acoustic calls from throughout the North Pacific, the knowledge that the ENP population produces a different call than blue whales in the western North Pacific (WNP). The catches were split by estimating spatiotemporal occurrence of blue whales with generalized additive models fitted to acoustic call patterns, which predict the probability a catch belonged to the ENP population based on the proportion of calls of each population recorded by latitude, longitude, and month. When applied to the conflated historical catches, which totaled 9,773, we estimate that ENP blue whale catches totaled 3,411 (95% range 2,593 to 4,114) from 1905-1971, and amounted to 35% (95% range 27% to 42%) of all catches in the North Pacific. Thus most catches in the North Pacific were for WNP blue whales, totaling 6,362 (95% range 5,659 to 7,180). The uncertainty in the acoustic data influence the results substantially more than uncertainty in catch locations and dates, but the results are fairly insensitive to the ecological assumptions made in the analysis. The results of this study provide information for future studies investigating the recovery of these populations and the impact of continuing and future sources of anthropogenic mortality.

Conservation and Management of the Endangered Fiji Sago Palm, Metroxylon vitiense, in Fiji

NASA Astrophysics Data System (ADS)

Morrison, Clare; Rounds, Isaac; Watling, Dick

2012-05-01

Recovery planning is a key component of many threatened species conservation initiatives and can be a powerful awareness raising tool. One of the largest impediments to conservation efforts in the Pacific region however, is the lack of ecological data and its subsequent effects on the development of feasible and useful recovery plans for threatened species. Without these plans, the understaffed, underfunded and often technically ill-equipped conservation agencies face huge difficulties in planning, prioritizing and conducting conservation activities to adequately protect biodiversity. The Fiji sago palm, Metroxylon vitiense, is an endemic endangered palm species whose survival is heavily dependent on a feasible species recovery plan. It is geographically restricted and threatened by habitat destruction and overexploitation for thatch for the tourism industry and palm heart consumption by local consumers. Despite its threatened status, M. vitiense is not currently protected by national or international legislation. Recent field surveys and extensive stakeholder consultation have resulted in the production of a species recovery plan highlighting the importance of the species and advocating sustainable harvesting rather than complete bans to promote conservation. This article summarizes the recovery plan and its current effects on the status of M. vitiense in Fiji. We also discuss the role of different stakeholders in the conservation of M. vitiense, including the absence of significant behavioral changes by the largest consumer - the tourism industry, and the importance of recovery plans for biodiversity conservation in the Pacific.

An assessment of initial body size in loggerhead sea turtle (Caretta caretta) hatchlings in Turkey.

PubMed

Ozdemir, Adem; Ilgaz, Cetin; Kumlutaş, Yusuf; Durmuş, Salih Hakan; Kaska, Yakup; Türkozan, Oğuz

2007-04-01

Eggs, hatchlings, and adult loggerhead turtles, and incubation durations of clutches, were measured on three Turkish beaches (Dalyan, Fethiye and Göksu Delta), and some physical features of nests were compared. These features were not statistically different among the beaches, except for nest depth and distance to the high water mark. There was a positive relationship between hatchling mass and egg size. The carapace length of hatchlings was correlated with both egg diameter and incubation duration. The duration of asynchronous emergence of hatchlings on Fethiye beach was slightly longer than on the other two beaches, and the size of hatchlings decreased as asynchronous emergence proceeded. Of the hatchlings that emerged first, those that died were significantly smaller in SCL and mass than those that lived. These results suggest that smaller hatchlings may not be vigorous enough to emerge earlier from nests, and that they may be less fit.

Phylogeography, Genetic Diversity, and Management Units of Hawksbill Turtles in the Indo-Pacific.

PubMed

Vargas, Sarah M; Jensen, Michael P; Ho, Simon Y W; Mobaraki, Asghar; Broderick, Damien; Mortimer, Jeanne A; Whiting, Scott D; Miller, Jeff; Prince, Robert I T; Bell, Ian P; Hoenner, Xavier; Limpus, Colin J; Santos, Fabrício R; FitzSimmons, Nancy N

2016-05-01

Hawksbill turtle (Eretmochelys imbricata) populations have experienced global decline because of a history of intense commercial exploitation for shell and stuffed taxidermied whole animals, and harvest for eggs and meat. Improved understanding of genetic diversity and phylogeography is needed to aid conservation. In this study, we analyzed the most geographically comprehensive sample of hawksbill turtles from the Indo-Pacific Ocean, sequencing 766 bp of the mitochondrial control region from 13 locations (plus Aldabra, n = 4) spanning over 13500 km. Our analysis of 492 samples revealed 52 haplotypes distributed in 5 divergent clades. Diversification times differed between the Indo-Pacific and Atlantic lineages and appear to be related to the sea-level changes that occurred during the Last Glacial Maximum. We found signals of demographic expansion only for turtles from the Persian Gulf region, which can be tied to a more recent colonization event. Our analyses revealed evidence of transoceanic migration, including connections between feeding grounds from the Atlantic Ocean and Indo-Pacific rookeries. Hawksbill turtles appear to have a complex pattern of phylogeography, showing a weak isolation by distance and evidence of multiple colonization events. Our novel dataset will allow mixed-stock analyses of hawksbill turtle feeding grounds in the Indo-Pacific by providing baseline data needed for conservation efforts in the region. Eight management units are proposed in our study for the Indo-Pacific region that can be incorporated in conservation plans of this critically endangered species. © The American Genetic Association. 2015. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

Nowhere to Go but Up: Impacts of Climate Change on Demographics of a Short-Range Endemic (Crotalus willardi obscurus) in the Sky-Islands of Southwestern North America.

PubMed

Davis, Mark A; Douglas, Marlis R; Webb, Colleen T; Collyer, Michael L; Holycross, Andrew T; Painter, Charles W; Kamees, Larry K; Douglas, Michael E

2015-01-01

Biodiversity elements with narrow niches and restricted distributions (i.e., 'short range endemics,' SREs) are particularly vulnerable to climate change. The New Mexico Ridge-nosed Rattlesnake (Crotalus willardi obscurus, CWO), an SRE listed under the U.S. Endangered Species Act within three sky islands of southwestern North America, is constrained at low elevation by drought and at high elevation by wildfire. We combined long-term recapture and molecular data with demographic and niche modeling to gauge its climate-driven status, distribution, and projected longevity. The largest population (Animas) is numerically constricted (N = 151), with few breeding adults (Nb = 24) and an elevated inbreeding coefficient (ΔF = 0.77; 100 years). Mean home range (0.07 km2) is significantly smaller compared to other North American rattlesnakes, and movements are within, not among sky islands. Demographic values, when gauged against those displayed by other endangered/Red-Listed reptiles [e.g., Loggerhead Sea Turtle (Caretta caretta)], are either comparable or markedly lower. Survival rate differs significantly between genders (female

Nowhere to Go but Up: Impacts of Climate Change on Demographics of a Short-Range Endemic (Crotalus willardi obscurus) in the Sky-Islands of Southwestern North America

PubMed Central

Davis, Mark A.; Douglas, Marlis R.; Webb, Colleen T.; Collyer, Michael L.; Holycross, Andrew T.; Painter, Charles W.; Kamees, Larry K.; Douglas, Michael E.

2015-01-01

Biodiversity elements with narrow niches and restricted distributions (i.e., ‘short range endemics,’ SREs) are particularly vulnerable to climate change. The New Mexico Ridge-nosed Rattlesnake (Crotalus willardi obscurus, CWO), an SRE listed under the U.S. Endangered Species Act within three sky islands of southwestern North America, is constrained at low elevation by drought and at high elevation by wildfire. We combined long-term recapture and molecular data with demographic and niche modeling to gauge its climate-driven status, distribution, and projected longevity. The largest population (Animas) is numerically constricted (N = 151), with few breeding adults (Nb = 24) and an elevated inbreeding coefficient (ΔF = 0.77; 100 years). Mean home range (0.07km2) is significantly smaller compared to other North American rattlesnakes, and movements are within, not among sky islands. Demographic values, when gauged against those displayed by other endangered/Red-Listed reptiles [e.g., Loggerhead Sea Turtle ( Caretta caretta )], are either comparable or markedly lower. Survival rate differs significantly between genders (female

Abundance and Survival of Pacific Humpback Whales in a Proposed Critical Habitat Area

PubMed Central

Ashe, Erin; Wray, Janie; Picard, Christopher R.; Williams, Rob

2013-01-01

Humpback whales (Megaptera novaeangliae) were hunted commercially in Canada's Pacific region until 1966. Depleted to an estimated 1,400 individuals throughout the North Pacific, humpback whales are listed as Threatened under Canada's Species at Risk Act (SARA) and Endangered under the US Endangered Species Act. We conducted an 8-year photo-identification study to monitor humpback whale usage of a coastal fjord system in British Columbia (BC), Canada that was recently proposed as candidate critical habitat for the species under SARA. This participatory research program built collaborations among First Nations, environmental non-governmental organizations and academics. The study site, including the territorial waters of Gitga'at First Nation, is an important summertime feeding destination for migratory humpback whales, but is small relative to the population's range. We estimated abundance and survivorship using mark-recapture methods using photographs of naturally marked individuals. Abundance of humpback whales in the region was large, relative to the site's size, and generally increased throughout the study period. The resulting estimate of adult survivorship (0.979, 95% CI: 0.914, 0.995) is at the high end of previously reported estimates. A high rate of resights provides new evidence for inter-annual site fidelity to these local waters. Habitat characteristics of our study area are considered ecologically significant and unique, and this should be considered as regulatory agencies consider proposals for high-volume crude oil and liquefied natural gas tanker traffic through the area. Monitoring population recovery of a highly mobile, migratory species is daunting for low-cost, community-led science. Focusing on a small, important subset of the animals' range can make this challenge more tractable. Given low statistical power and high variability, our community is considering simpler ecological indicators of population health, such as the number of individuals harmed or killed each year by human activities, including ship strikes and entanglement in fishing gear. PMID:24058666

Abundance and survival of Pacific humpback whales in a proposed critical habitat area.

PubMed

Ashe, Erin; Wray, Janie; Picard, Christopher R; Williams, Rob

2013-01-01

Humpback whales (Megaptera novaeangliae) were hunted commercially in Canada's Pacific region until 1966. Depleted to an estimated 1,400 individuals throughout the North Pacific, humpback whales are listed as Threatened under Canada's Species at Risk Act (SARA) and Endangered under the US Endangered Species Act. We conducted an 8-year photo-identification study to monitor humpback whale usage of a coastal fjord system in British Columbia (BC), Canada that was recently proposed as candidate critical habitat for the species under SARA. This participatory research program built collaborations among First Nations, environmental non-governmental organizations and academics. The study site, including the territorial waters of Gitga'at First Nation, is an important summertime feeding destination for migratory humpback whales, but is small relative to the population's range. We estimated abundance and survivorship using mark-recapture methods using photographs of naturally marked individuals. Abundance of humpback whales in the region was large, relative to the site's size, and generally increased throughout the study period. The resulting estimate of adult survivorship (0.979, 95% CI: 0.914, 0.995) is at the high end of previously reported estimates. A high rate of resights provides new evidence for inter-annual site fidelity to these local waters. Habitat characteristics of our study area are considered ecologically significant and unique, and this should be considered as regulatory agencies consider proposals for high-volume crude oil and liquefied natural gas tanker traffic through the area. Monitoring population recovery of a highly mobile, migratory species is daunting for low-cost, community-led science. Focusing on a small, important subset of the animals' range can make this challenge more tractable. Given low statistical power and high variability, our community is considering simpler ecological indicators of population health, such as the number of individuals harmed or killed each year by human activities, including ship strikes and entanglement in fishing gear.

Molecular and morphological analysis of the critically endangered Fijian iguanas reveals cryptic diversity and a complex biogeographic history

USGS Publications Warehouse

Keogh, J.S.; Edwards, D.L.; Fisher, R.N.; Harlow, P.S.

2008-01-01

The Pacific iguanas of the Fijian and Tongan archipelagos are a biogeographic enigma in that their closest relatives are found only in the New World. They currently comprise two genera and four species of extinct and extant taxa. The two extant species, Brachylophus fasciatus from Fiji, Tonga, and Vanuatu and Brachylophus vitiensis from western Fiji, are of considerable conservation concern with B. vitiensis listed as critically endangered. A recent molecular study has shown that Brachylophus comprised three evolutionarily significant units. To test these conclusions and to reevaluate the phylogenetic and biogeographic relationships within Brachylophus, we generated an mtDNA dataset consisting of 1462 base pairs for 61 individuals from 13 islands, representing both Brachylophus species. Unweighted parsimony analyses and Bayesian analyses produced a well-resolved phylogenetic hypothesis supported by high bootstrap values and posterior probabilities within Brachylophus. Our data reject the monophyly of specimens previously believed to comprise B. fasciatus. Instead, our data demonstrate that living Brachylophus comprise three robust and well-supported clades that do not correspond to current taxonomy. One of these clades comprises B. fasciatus from the Lau group of Fiji and Tonga (type locality for B. fasciatus), while a second comprises putative B. fasciatus from the central regions of Fiji, which we refer to here as B. n. sp. Animals in this clade form the sister group to B. vitiensis rather than other B. fasciatus. We herein describe this clade as a new species of Brachylophus based on molecular and morphological data. With only one exception, every island is home to one or more unique haplotypes. We discuss alternative biogeographic hypotheses to explain their distribution in the Pacific and the difficulties of distinguishing these. Together, our molecular and taxonomic results have important implications for future conservation initiatives for the Pacific iguanas. ?? 2008 The Royal Society.

Molecular phylogeny for marine turtles based on sequences of the ND4-leucine tRNA and control regions of mitochondrial DNA.

PubMed

Dutton, P H; Davis, S K; Guerra, T; Owens, D

1996-06-01

Marine turtles are divided into two families, the Dermochelyidae and the Cheloniidae. The majority of species are currently placed within the two tribes of the Cheloniidae, the Chelonini and the Carettini, but debate continues over generic and tribal affinities as well as species boundaries. We used nucleotide sequences (907 bp) from the ND4-LEU tRNA region and the control region (526 bp) of mitochondrial DNA to resolve areas of uncertainty in marine turtle (Chelonioidae) systematics. The ND4-LEU tRNA fragment was more conserved than the fragment from the control region, with sequence divergences ranging from 0.026 to 0.148 and 0.067 to 0.267, respectively. Parsimony analysis based only on the ND4-LEU tRNA data suggests that the hawksbill, Eretmochelys imbricata, lies within the tribe Carettni and is closely related to the genus Caretta, but could not resolve the position of the flatback, Natator depressus. A similar analysis based only on the control region sequence data suggested that N. depressus is affiliated with the Chelonini, but failed to resolve the position of E. imbricata and the loggerhead, Caretta caretta. In contrast to these results, the combination of both data sets with published cytochrome b data produced a phylogeny based on 1924 bp of sequence data which resolves the position of E. imbricata relative to Caretta and Lepidochelys and joins N. depressus as sister to the Carettini. Based on the molecular data, the Chelonini contains the Chelonia species, while the Carettini contains the remaining species of Cheloniidae. The control region sequence divergence between Pacific and Atlantic populations of the leatherback, Dermochelys coriacea, was relatively low (0.0081) when compared with the green turtle, Chelonia mydas (0.071-0.074). Atlantic and Pacific populations of Ch. mydas were found to be paraphyletic with respect to the black turtle, Ch. agassizi, suggesting that the current taxonomic designations within the Pacific Chelonia are questionable. This analysis shows the utility of combining sequence data for different regions of mtDNA that by themselves are insufficient to obtain robust phylogenies.

Evaluating anthropogenic threats to endangered killer whales to inform effective recovery plans.

PubMed

Lacy, Robert C; Williams, Rob; Ashe, Erin; Balcomb Iii, Kenneth C; Brent, Lauren J N; Clark, Christopher W; Croft, Darren P; Giles, Deborah A; MacDuffee, Misty; Paquet, Paul C

2017-10-26

Understanding cumulative effects of multiple threats is key to guiding effective management to conserve endangered species. The critically endangered, Southern Resident killer whale population of the northeastern Pacific Ocean provides a data-rich case to explore anthropogenic threats on population viability. Primary threats include: limitation of preferred prey, Chinook salmon; anthropogenic noise and disturbance, which reduce foraging efficiency; and high levels of stored contaminants, including PCBs. We constructed a population viability analysis to explore possible demographic trajectories and the relative importance of anthropogenic stressors. The population is fragile, with no growth projected under current conditions, and decline expected if new or increased threats are imposed. Improvements in fecundity and calf survival are needed to reach a conservation objective of 2.3% annual population growth. Prey limitation is the most important factor affecting population growth. However, to meet recovery targets through prey management alone, Chinook abundance would have to be sustained near the highest levels since the 1970s. The most optimistic mitigation of noise and contaminants would make the difference between a declining and increasing population, but would be insufficient to reach recovery targets. Reducing acoustic disturbance by 50% combined with increasing Chinook by 15% would allow the population to reach 2.3% growth.

First report of metallic elements in loggerhead and leatherback turtle eggs from the Indian Ocean.

PubMed

du Preez, M; Nel, R; Bouwman, H

2018-04-01

Bio-monitoring of pollutants in long-lived animals such as sea turtles is an important tool in ecotoxicology. We present the first report on metallic elements in sea turtle eggs from the Indian Ocean. Eggs of the leatherback and loggerhead turtle that breed on the Indian Ocean coast of South Africa were analysed for 30 elements. The eggshells and egg contents of the loggerhead turtle, the smaller of the two species, had higher or significantly higher concentrations than leatherbacks, except for strontium - the reason is unknown. Elemental concentrations in eggshells and contents were the same or lower compared with other studies. The differences in concentrations in the egg contents and eggshells between the two species are likely due to different trophic levels, migration patterns, life histories, age, and growth, as well as differences in pollution sources and the uptake, retention and elimination characteristics of the different elements by the different species. We found no congruence between patterns in eggshells and corresponding egg contents, for both species. However, eggshells and egg contents showed congruence between species. The lack of congruence between eggshells and contents within each species precludes using eggshell concentrations as a proxy for egg content concentrations. Copper, strontium, and selenium occurred at concentrations higher than available toxic reverence values. Further research is warranted, including the analyses of POPs, as well as possible deme discrimination based on compositional pattern differences. Turtles serve as 'active samplers' returning to the same location to breed-something that is not practical with marine mammals or elasmobranchs. Copyright © 2018 Elsevier Ltd. All rights reserved.

Size Scaling in Western North Atlantic Loggerhead Turtles Permits Extrapolation between Regions, but Not Life Stages.

PubMed

Marn, Nina; Klanjscek, Tin; Stokes, Lesley; Jusup, Marko

2015-01-01

Sea turtles face threats globally and are protected by national and international laws. Allometry and scaling models greatly aid sea turtle conservation and research, and help to better understand the biology of sea turtles. Scaling, however, may differ between regions and/or life stages. We analyze differences between (i) two different regional subsets and (ii) three different life stage subsets of the western North Atlantic loggerhead turtles by comparing the relative growth of body width and depth in relation to body length, and discuss the implications. Results suggest that the differences between scaling relationships of different regional subsets are negligible, and models fitted on data from one region of the western North Atlantic can safely be used on data for the same life stage from another North Atlantic region. On the other hand, using models fitted on data for one life stage to describe other life stages is not recommended if accuracy is of paramount importance. In particular, young loggerhead turtles that have not recruited to neritic habitats should be studied and modeled separately whenever practical, while neritic juveniles and adults can be modeled together as one group. Even though morphometric scaling varies among life stages, a common model for all life stages can be used as a general description of scaling, and assuming isometric growth as a simplification is justified. In addition to linear models traditionally used for scaling on log-log axes, we test the performance of a saturating (curvilinear) model. The saturating model is statistically preferred in some cases, but the accuracy gained by the saturating model is marginal.

Analysis of sugarcane herbicides in marine turtle nesting areas and assessment of risk using in vitro toxicity assays.

PubMed

Allan, Hannah L; van de Merwe, Jason P; Finlayson, Kimberly A; O'Brien, Jake W; Mueller, Jochen F; Leusch, Frederic D L

2017-10-01

Agricultural processes are associated with many different herbicides that can contaminate surrounding environments. In Queensland, Australia, herbicides applied to agricultural crops may pose a threat to valuable coastal habitats including nesting beaches for threatened loggerhead turtles (Caretta caretta). This study 1) measured concentrations of herbicides in the beach sand of Mon Repos, an important marine turtle nesting beach in Australia that is adjacent to significant sugarcane crops, and 2) investigated the toxicity of these herbicides to marine turtles using a cell-based assay. Samples of sand from turtle nest depth and water from surrounding agricultural drains and wetlands were collected during the wet season when herbicide runoff was expected to be the greatest and turtles were nesting. Samples were extracted using solid phase extraction and extracts were analysed using chemical analysis targeting herbicides, as well as bioanalytical techniques (IPAM-assay and loggerhead turtle skin cell cytotoxicity assay). Twenty herbicides were detected in areas between sugarcane crops and the nesting beach, seven of which were also detected in the sand extracts. Herbicides present in the nearby wetland were also detected in the beach sand, indicating potential contamination of the nesting beach via the river outlet as well as ground water. Although herbicides were detected in nesting sand, bioassays using loggerhead turtle skin cells indicated a low risk of acute toxicity at measured environmental concentrations. Further research should investigate potentially more subtle effects, such as endocrine disruption and mixture effects, to better assess the threat that herbicides pose to this population of marine turtles. Copyright © 2017 Elsevier Ltd. All rights reserved.

Common coastal foraging areas for loggerheads in the Gulf of Mexico: Opportunities for marine conservation

USGS Publications Warehouse

Hart, Kristen M.; Lamont, Margaret M.; Fujisaki, Ikuko; Tucker, Anton D.; Carthy, Raymond R.

2012-01-01

Designing conservation strategies that protect wide-ranging marine species is a significant challenge, but integrating regional telemetry datasets and synthesizing modeled movements and behavior offer promise for uncovering distinct at-sea areas that are important habitats for imperiled marine species. Movement paths of 10 satellite-tracked female loggerheads (Caretta caretta) from three separate subpopulations in the Gulf of Mexico, USA, revealed migration to discrete foraging sites in two common areas at-sea in 2008, 2009, and 2010. Foraging sites were 102–904 km away from nesting and tagging sites, and located off southwest Florida and the northern Yucatan Peninsula, Mexico. Within 3–35 days, turtles migrated to foraging sites where they all displayed high site fidelity over time. Core-use foraging areas were 13.0–335.2 km2 in size, in water <50 m deep, within a mean distance to nearest coastline of 58.5 km, and in areas of relatively high net primary productivity. The existence of shared regional foraging sites highlights an opportunity for marine conservation strategies to protect important at-sea habitats for these imperiled marine turtles, in both USA and international waters. Until now, knowledge of important at-sea foraging areas for adult loggerheads in the Gulf of Mexico has been limited. To better understand the spatial distribution of marine turtles that have complex life-histories, we propose further integration of disparate tracking data-sets at the oceanic scale along with modeling of movements to identify critical at-sea foraging habitats where individuals may be resident during non-nesting periods.

Associations between Organochlorine Contaminant Concentrations and Clinical Health Parameters in Loggerhead Sea Turtles from North Carolina, USA

PubMed Central

Keller, Jennifer M.; Kucklick, John R.; Stamper, M. Andrew; Harms, Craig A.; McClellan-Green, Patricia D.

2004-01-01

Widespread and persistent organochlorine (OC) contaminants, such as polychlorinated biphenyls (PCBs) and pesticides, are known to have broad-ranging toxicities in wildlife. In this study we investigated, for the first time, their possible health effects on loggerhead sea turtles (Caretta caretta). Nonlethal fat biopsies and blood samples were collected from live turtles for OC contaminant analysis, and concentrations were compared with clinical health assessment data, including hematology, plasma chemistry, and body condition. Concentrations of total PCBs (∑PCBs), ∑DDTs, ∑chlordanes, dieldrin, and mirex were determined in 44 fat biopsies and 48 blood samples. Blood concentrations of ∑chlordanes were negatively correlated with red blood cell counts, hemoglobin, and hematocrit, indicative of anemia. Positive correlations were observed between most classes of OC contaminants and white blood cell counts and between mirex and ∑TCDD-like PCB concentrations and the heterophil:lymphocyte ratio, suggesting modulation of the immune system. All classes of OCs in the blood except dieldrin were correlated positively with aspartate aminotransferase (AST) activity, indicating possible hepatocellular damage. Mirex and ∑TCDD-like PCB blood concentrations were negatively correlated with alkaline phosphatase (ALP) activity. Significant correlations to levels of certain OC contaminant classes also suggested possible alteration of protein (↑blood urea nitrogen, ↓albumin:globulin ratio), carbohydrate (↓glucose), and ion (↑sodium, ↓magnesium) regulation. These correlations suggest that OC contaminants may be affecting the health of loggerhead sea turtles even though sea turtles accumulate lower concentrations of OCs compared with other wildlife. PMID:15238280

Biomarkers reveal sea turtles remained in oiled areas following the Deepwater Horizon oil spill.

PubMed

Vander Zanden, Hannah B; Bolten, Alan B; Tucker, Anton D; Hart, Kristen M; Lamont, Margaret M; Fujisaki, Ikuko; Reich, Kimberly J; Addison, David S; Mansfield, Katherine L; Phillips, Katrina F; Pajuelo, Mariela; Bjorndal, Karen A

2016-10-01

Assessments of large-scale disasters, such as the Deepwater Horizon oil spill, are problematic because while measurements of post-disturbance conditions are common, measurements of pre-disturbance baselines are only rarely available. Without adequate observations of pre-disaster organismal and environmental conditions, it is impossible to assess the impact of such catastrophes on animal populations and ecological communities. Here, we use long-term biological tissue records to provide pre-disaster data for a vulnerable marine organism. Keratin samples from the carapace of loggerhead sea turtles record the foraging history for up to 18 years, allowing us to evaluate the effect of the oil spill on sea turtle foraging patterns. Samples were collected from 76 satellite-tracked adult loggerheads in 2011 and 2012, approximately one to two years after the spill. Of the 10 individuals that foraged in areas exposed to surface oil, none demonstrated significant changes in foraging patterns post spill. The observed long-term fidelity to foraging sites indicates that loggerheads in the northern Gulf of Mexico likely remained in established foraging sites, regardless of the introduction of oil and chemical dispersants. More research is needed to address potential long-term health consequences to turtles in this region. Mobile marine organisms present challenges for researchers to monitor effects of environmental disasters, both spatially and temporally. We demonstrate that biological tissues can reveal long-term histories of animal behavior and provide critical pre-disaster baselines following an anthropogenic disturbance or natural disaster. © 2016 by the Ecological Society of America.

Climate change impacts on leatherback turtle pelagic habitat in the Southeast Pacific

NASA Astrophysics Data System (ADS)

Willis-Norton, Ellen; Hazen, Elliott L.; Fossette, Sabrina; Shillinger, George; Rykaczewski, Ryan R.; Foley, David G.; Dunne, John P.; Bograd, Steven J.

2015-03-01

Eastern Pacific populations of the leatherback turtle (Dermochelys coriacea) have declined by over 90% during the past three decades. The decline is primarily attributed to human pressures, including unsustainable egg harvest, development on nesting beaches, and by-catch mortality. In particular, the effects of climate change may impose additional stresses upon already threatened leatherback populations. This study analyzes how the pelagic habitat of Eastern Pacific leatherbacks may be affected by climate change over the next century. This population adheres to a persistent migration pattern; following nesting at Playa Grande, Costa Rica, individuals move rapidly through equatorial currents and into foraging habitat within the oligotrophic South Pacific Gyre. Forty-six nesting females were fitted with satellite tags. Based on the turtle positions, ten environmental variables were sampled along the tracks. Presence/absence habitat models were created to determine the oceanographic characteristics of the preferred turtle habitat. Core pelagic habitat was characterized by relatively low sea surface temperatures and chlorophyll-a. Based on these habitat models, we predicted habitat change using output from the Geophysical Fluid Dynamics Laboratory prototype Earth System Model under the Special Report on Emissions Scenario A2 (business-as-usual). Although the model predicted both habitat losses and gains throughout the region, we estimated that overall the core pelagic habitat of the Eastern Pacific leatherback population will decline by approximately 15% within the next century. This habitat modification might increase pressure on a critically endangered population, possibly forcing distributional shifts, behavioral changes, or even extinction.

The true identity of Siderastrea glynni Budd & Guzmán, 1994, a highly endangered eastern Pacific scleractinian coral

NASA Astrophysics Data System (ADS)

Glynn, Peter W.; Grassian, Benjamin; Kleemann, Karl H.; Maté, Juan L.

2016-12-01

Siderastrea glynni Budd & Guzmán, 1994 was erroneously erected from live colonies of S. siderea (Ellis & Solander, 1768) unintentionally transferred from the Caribbean to the Pacific side of the Isthmus of Panamá. These corals had been used in experiments conducted in the early 1980s by KH Kleemann at Urabá Island, Taboga Islands, Gulf of Panamá, at the same site of the subsequent S. glynni discovery. Here, we offer evidence that live fragments deposited at Urabá Island in 1982 are the same found by Guzmán in 1992, and were inadvertently introduced from colonies of Caribbean S. siderea that were presumed to be dead. This morphological study builds on and supports recent genetic analyses of the S. glynni holobiont. In light of these findings, S. glynni should be regarded as a subjective junior synonym of S. siderea.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Johnson, Gary E.

This document is the annual report for fiscal year 2014 for the project called Facilitation of the Estuary/Ocean Subgroup (EOS) and the Expert Regional Technical Group (ERTG). Pacific Northwest National Laboratory (PNNL) conducted the project for the Bonneville Power Administration. The EOS and ERTG are part of the research, monitoring, and evaluation and habitat restoration efforts, respectively, developed by the Action Agencies (BPA, U.S. Army Corps of Engineers) in response to obligations arising from the Endangered Species Act as a result of operation of the Federal Columbia River Power System and implemented under the Columbia Estuary Ecosystem Restoration Program.

KSC-07pd0874

NASA Image and Video Library

2007-04-11

KENNEDY SPACE CENTER, FLA. -- A male greater scaup duck is mirrored in the water on Kennedy Space Center. Normally found in Alaska and northern Canada, this species winters along the Atlantic, Pacific and Gulf coasts. KSC shares a boundary with the Merritt Island Wildlife Nature Refuge. The refuge is a habitat for more than 310 species of birds, 25 mammals, 117 fishes and 65 amphibians and reptiles. In addition, the Refuge supports 19 endangered or threatened wildlife species on Federal or State lists, more than any other single refuge in the U.S. Photo credit: NASA/Dimitri Gerondidakis

76 FR 515 - Endangered and Threatened Species, Designation of Critical Habitat for Southern Distinct...

Federal Register 2010, 2011, 2012, 2013, 2014

2011-01-05

...We, the National Marine Fisheries Service (NMFS), propose to designate critical habitat for the southern Distinct Population Segment (DPS) of Pacific eulachon (Thaleichthys pacificus), which was recently listed as threatened under the Endangered Species Act (ESA). We have proposed 12 specific areas for designation as critical habitat within the states of California, Oregon, and Washington. The proposed areas are a combination of freshwater creeks and rivers and their associated estuaries which comprise approximately 470 km (292 mi) of habitat. Three particular areas are proposed for exclusion after evaluating the impacts and benefits associated with tribal land ownership and management by Indian tribes, but no areas are proposed for exclusion based on economic impacts. We are soliciting comments from the public on all aspects of the proposal, including information on the economic, national security, and other relevant impacts of the proposed designation, as well as the benefits to the southern DPS of eulachon from designation. We will consider additional information received prior to making a final designation.

Ecology and habitat of breeding Northern Goshawks in the inland Pacific Northwest: A summary of research in the 1990s

USGS Publications Warehouse

DeStefano, S.; McGrath, M.T.; Daw, S.K.; Desimone, S.M.

2006-01-01

During the 1990s, we conducted research on the distribution, productivity, and habitat relationships of Northern Goshawks (Accipiter gentilis) in eastern Oregon and Washington. Our research was initiated primarily in response to concerns raised about the status of Northern Goshawks in the western US, and coincided with early attempts to list the species as threatened or endangered under the Endangered Species Act and the publication of management guidelines for goshawks in the southwestern US. To develop baseline information on the status, distribution, and habitat relationships of goshawks in eastside forests (i.e., east of the Cascade Mountain Range) in the Pacific Northwest, we established study areas on three national forests in eastern Oregon in 1992, adding a fourth study area in central Washington in 1994. We focused on the breeding season and nesting habitat because of its primary importance to goshawk ecology and the logistical feasibility of finding nests. Density of breeding pairs ranged from 0.03-0.09/100 ha, and annual productivity ranged from 0.3-2.2 young fledged/nest. Goshawks selected forest stands with trees of larger diameter and greater canopy closure for nesting than available in the landscape. Occasionally nests could be found in large trees in open-canopied stands. As distance increased from the nest site, forest type and structure became more heterogeneous and the prevalence of older-seral-stage forest declined. Dry or wet openings were present in most territories, often within close proximity to nest stands. Goshawks ate a variety of mammalian and avian prey. Mammal species made up a larger portion of prey biomass on two of the national forests, but avian species appeared to be more prevalent in the diet of goshawks in the most northern study area. We recommend that the existing management guidelines for goshawks in the Southwest form a basis for management in the inland Pacific Northwest, particularly with regard to nested spatial concepts, emphasis on management of prey, and the use of silviculture to promote the development and replacement of old growth or late-seral-stage forest. Our research and management recommendations can be used in concert with the Southwestern management guidelines to establish a mix of vegetation structural stages to support goshawk populations, their prey, and other forest wildlife species specifically for the inland Pacific Northwest.

Calls reveal population structure of blue whales across the southeast Indian Ocean and the southwest Pacific Ocean.

PubMed

Balcazar, Naysa E; Tripovich, Joy S; Klinck, Holger; Nieukirk, Sharon L; Mellinger, David K; Dziak, Robert P; Rogers, Tracey L

2015-11-24

For effective species management, understanding population structure and distribution is critical. However, quantifying population structure is not always straightforward. Within the Southern Hemisphere, the blue whale ( Balaenoptera musculus ) complex is extremely diverse but difficult to study. Using automated detector methods, we identified "acoustic populations" of whales producing region-specific call types. We examined blue whale call types in passive acoustic data at sites spanning over 7,370 km across the southeast Indian Ocean and southwest Pacific Ocean (SWPO) from 2009 to 2012. In the absence of genetic resolution, these acoustic populations offer unique information about the blue whale population complex. We found that the Australian continent acts as a geographic boundary, separating Australia and New Zealand blue whale acoustic populations at the junction of the Indian and Pacific Ocean basins. We located blue whales in previously undocumented locations, including the far SWPO, in the Tasman Sea off the east coast of Australia, and along the Lau Basin near Tonga. Our understanding of population dynamics across this broad scale has significant implications to recovery and conservation management for this endangered species, at a regional and global scale.

Lagoon islets as indicators of recent environmental changes in the South Pacific - The New Caledonian example

NASA Astrophysics Data System (ADS)

Garcin, Manuel; Vendé-Leclerc, Myriam; Maurizot, Pierre; Le Cozannet, Gonéri; Robineau, Bernard; Nicolae-Lerma, Alexandre

2016-07-01

The question of the impacts of climate change and sea level rise on small islands is currently much discussed. The many thousands of Pacific islands in their different contexts (geodynamic, climatic, etc.) and the insufficient data available explain why it is difficult to clearly discern the specific role of climate change in the recent evolution of these islands. To address this question, we investigated the recent changes affecting 21 islets in New Caledonia's lagoon. These islets are either located on small patch-reefs inside the New Caledonia Island lagoon or lie directly on the barrier reef. Based on the studies we conducted (field surveys, reconstruction of changes in the islets over the last decades, shoreline changes) we were able to define a typology of the islets that includes 6 stages and a life expectancy index. Using the life expectancy index, we found that of the 21 islets studied, 19% are in a highly critical situation, meaning they are very likely to be endangered in the short term (within the next few years), 9.5% are in a critical situation, i.e., likely to disappear in the near future and very likely to disappear in the medium term (next few decades), 19% are evolving rapidly, which could lead to their disappearance in the medium term but not in the short term, 9.5% are not endangered in the short and medium term and 43% are not endangered at all (stable or accreting, large area, relatively higher altitude). In this context, the rise in sea level induced by climate change is an adverse factor which is likely to lower the resilience of the islets to erosion processes. Other factors like the degradation of the reef ecosystem due to variations in ocean salinity, temperature and acidity, lower sediment stocks on the beaches and foreshores, human visitors, coastal development and so on are other adverse factors that could modify the capacity for resilience of these islets. Due to their variety and sensitivity, New Caledonia's islets could thus serve as integrative indicators of environmental and climatic change for New Caledonia.

The status of sea ducks in the North Pacific Rim: Toward their conservation and management

USGS Publications Warehouse

Goudie, R. Ian; Brault, Solange; Conant, Bruce; Kondratyev, Alexander V.; Petersen, Margaret R.; Vermeer, Kees; McCabe, Richard E.; Wadsworth, Kelly G.

1994-01-01

Sea ducks (tribe Mergini after Johnsgard 1960) are the most northerly distributed ducks, and species diversity is greatest in the North Pacific. They exploit a diversity of inshore and offshore marine habitats during the non-breeding season, and their use of habitat during breeding varies from coastal through freshwater wetlands of the tundra and taiga (Figure 1, Appendix 1). Non-breeding cohorts frequent marine habitats most of the year. Sea ducks thus are important indicators of the quality of freshwater and marine ecosystems of northern biomes.Of the 17 species discussed in this manuscript, at least 3 are reported to be declining (Appendix 2). However, the basis for many of those assessments is equivocal because there has been little effort to monitor populations. The efforts to more precisely assess their status point to catastrophic declines (Kertell 1991, Stehn et a 1993). Conservation problems related to sea ducks have a long history throughout the Holarctic. For example, the Labrador duck (Camptorhynchus labradorius) became extinct in 1875. (Phillips 1925); common eiders (Somateria mollissima) declined seriously throughout the northern hemisphere (Townsend 1914, Phillips 1925, Doughty 1979); harlequin ducks (Histrionicus histrionicus) experienced declines in Iceland and Greenland (Gudmundsson1971, Salomonson 1950), and more recently have been designated endangered in eastern Canada (Committee On the Status of Endangered Wildlife in Canada 1990). In Russia, all species of eider and harlequin ducks have been closed to sport hunting since 1981, and the Chinese mergansers (Mergus squamatus) presently are extremely rare and fully protected, i.e. category one of the red book (Solomonov 1987).

Low Major Histocompatibility Complex Class II Variation in the Endangered Indo-Pacific Humpback Dolphin (Sousa chinensis): Inferences About the Role of Balancing Selection.

PubMed

Zhang, Xiyang; Lin, Wenzhi; Zhou, Ruilian; Gui, Duan; Yu, Xinjian; Wu, Yuping

2016-03-01

It has been widely reported that the major histocompatibility complex (MHC) is under balancing selection due to its immune function across terrestrial and aquatic mammals. The comprehensive studies at MHC and other neutral loci could give us a synthetic evaluation about the major force determining genetic diversity of species. Previously, a low level of genetic diversity has been reported among the Indo-Pacific humpback dolphin (Sousa chinensis) in the Pearl River Estuary (PRE) using both mitochondrial marker and microsatellite loci. Here, the expression and sequence polymorphism of 2 MHC class II genes (DQB and DRB) in 32 S. chinensis from PRE collected between 2003 and 2011 were investigated. High ratios of non-synonymous to synonymous substitution rates, codon-based selection analysis, and trans-species polymorphism (TSP) support the hypothesis that balancing selection acted on S. chinensis MHC sequences. However, only 2 haplotypes were detected at either DQB or DRB loci. Moreover, the lack of deviation from the Hardy-Weinberg expectation at DRB locus combined with the relatively low heterozygosity at both DQB locus and microsatellite loci suggested that balancing selection might not be sufficient, which further suggested that genetic drift associated with historical bottlenecks was not mitigated by balancing selection in terms of the loss of MHC and neutral variation in S. chinensis. The combined results highlighted the importance of maintaining the genetic diversity of the endangered S. chinensis. © The American Genetic Association 2016. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

Sea turtle species vary in their susceptibility to tropical cyclones.

PubMed

Pike, David A; Stiner, John C

2007-08-01

Severe climatic events affect all species, but there is little quantitative knowledge of how sympatric species react to such situations. We compared the reproductive seasonality of sea turtles that nest sympatrically with their vulnerability to tropical cyclones (in this study, "tropical cyclone" refers to tropical storms and hurricanes), which are increasing in severity due to changes in global climate. Storm surges significantly decreased reproductive output by lowering the number of nests that hatched and the number of hatchlings that emerged from nests, but the severity of this effect varied by species. Leatherback turtles (Dermochelys coriacea) began nesting earliest and most offspring hatched before the tropical cyclone season arrived, resulting in little negative effect. Loggerhead turtles (Caretta caretta) nested intermediately, and only nests laid late in the season were inundated with seawater during storm surges. Green turtles (Chelonia mydas) nested last, and their entire nesting season occurred during the tropical cyclone season; this resulted in a majority (79%) of green turtle nests incubating in September, when tropical cyclones are most likely to occur. Since this timing overlaps considerably with the tropical cyclone season, the developing eggs and nests are extremely vulnerable to storm surges. Increases in the severity of tropical cyclones may cause green turtle nesting success to worsen in the future. However, published literature suggests that loggerhead turtles are nesting earlier in the season and shortening their nesting seasons in response to increasing sea surface temperatures caused by global climate change. This may cause loggerhead reproductive success to improve in the future because more nests will hatch before the onset of tropical cyclones. Our data clearly indicate that sympatric species using the same resources are affected differently by tropical cyclones due to slight variations in the seasonal timing of nesting, a key life history process.

Movements and Habitat-Use of Loggerhead Sea Turtles in the Northern Gulf of Mexico during the Reproductive Period

PubMed Central

Hart, Kristen M.; Lamont, Margaret M.; Sartain, Autumn R.; Fujisaki, Ikuko; Stephens, Brail S.

2013-01-01

Nesting strategies and use of important in-water habitats for far-ranging marine turtles can be determined using satellite telemetry. Because of a lack of information on habitat-use by marine turtles in the northern Gulf of Mexico, we used satellite transmitters in 2010 through 2012 to track movements of 39 adult female breeding loggerhead turtles (Caretta caretta) tagged on nesting beaches at three sites in Florida and Alabama. During the nesting season, recaptured turtles emerged to nest 1 to 5 times, with mean distance between emergences of 27.5 km; however, several turtles nested on beaches separated by ∼250 km within a single season. Mean total distances traveled throughout inter-nesting periods for all turtles was 1422.0±930.8 km. In-water inter-nesting sites, delineated using 50% kernel density estimation (KDE), were located a mean distance of 33.0 km from land, in water with mean depth of −31.6 m; other in-water inter-nesting sites, delineated using minimum convex polygon (MCP) approach, were located a mean 13.8 km from land and in water with a mean depth of −15.8 m. Mean size of in-water inter-nesting habitats were 61.9 km2 (50% KDEs, n = 10) and 741.4 km2 (MCPs, n = 30); these areas overlapped significantly with trawling and oil and gas extraction activities. Abundance estimates for this nesting subpopulation may be inaccurate in light of how much spread there is between nests of the same individual. Further, our results also have consequences for critical habitat designations for northern Gulf loggerheads, as protection of one nesting beach would not encompass the entire range used by turtles during breeding seasons. PMID:23843971

Movements and habitat-use of loggerhead sea turtles in the northern Gulf of Mexico during the reproductive period

USGS Publications Warehouse

Hart, Kristen M.; Lamont, Margaret M.; Sartain-Iverson, Autumn R.; Fujisaki, Ikuko; Stephens, Brail S.

2013-01-01

Nesting strategies and use of important in-water habitats for far-ranging marine turtles can be determined using satellite telemetry. Because of a lack of information on habitat-use by marine turtles in the northern Gulf of Mexico, we used satellite transmitters in 2010 through 2012 to track movements of 39 adult female breeding loggerhead turtles (Caretta caretta) tagged on nesting beaches at three sites in Florida and Alabama. During the nesting season, recaptured turtles emerged to nest 1 to 5 times, with mean distance between emergences of 27.5 km; however, several turtles nested on beaches separated by ~250 km within a single season. Mean total distances traveled throughout inter-nesting periods for all turtles was 1422.0±930.8 km. In-water inter-nesting sites, delineated using 50% kernel density estimation (KDE), were located a mean distance of 33.0 km from land, in water with mean depth of −31.6 m; other in-water inter-nesting sites, delineated using minimum convex polygon (MCP) approach, were located a mean 13.8 km from land and in water with a mean depth of −15.8 m. Mean size of in-water inter-nesting habitats were 61.9 km2 (50% KDEs, n = 10) and 741.4 km2 (MCPs, n = 30); these areas overlapped significantly with trawling and oil and gas extraction activities. Abundance estimates for this nesting subpopulation may be inaccurate in light of how much spread there is between nests of the same individual. Further, our results also have consequences for critical habitat designations for northern Gulf loggerheads, as protection of one nesting beach would not encompass the entire range used by turtles during breeding seasons.

Are coastal protected areas always effective in achieving population recovery for nesting sea turtles?

PubMed

Nel, Ronel; Punt, André E; Hughes, George R

2013-01-01

Sea turtles are highly migratory and usually dispersed, but aggregate off beaches during the nesting season, rendering them vulnerable to coastal threats. Consequently, coastal Marine Protection Areas (MPAs) have been used to facilitate the recovery of turtle populations, but the effectiveness of these programs is uncertain as most have been operating for less than a single turtle generation (or<20 yr). South Africa, however, hosts one of the longest running conservation programs, protecting nesting loggerhead (Caretta caretta) and leatherback (Dermochelys coriacea) turtles since 1963 in a series of coastal MPAs. This provides a unique opportunity to evaluate the long-term effect of spatial protection on the abundance of two highly migratory turtle species with different life history characteristics. Population responses were assessed by modeling the number of nests over time in an index area (13 km) and an expanded monitoring area (53 km) with varying survey effort. Loggerhead abundance increased dramatically from∼250 to>1700 nests pa (index area) especially over the last decade, while leatherback abundance increased initially∼10 to 70 nests pa (index area), but then stabilized. Although leatherbacks have higher reproductive output per female and comparable remigration periods and hatching success to loggerheads, the leatherback population failed to expand. Our results suggest that coastal MPAs can work but do not guarantee the recovery of sea turtle populations as pressures change over time. Causes considered for the lack of population growth include factors in the MPA (expansion into unmonitored areas or incubation environment) of outside of the MPA (including carrying capacity and fishing mortality). Conservation areas for migratory species thus require careful design to account for species-specific needs, and need to be monitored to keep track of changing pressures.

Temporal shift of sea turtle nest sites in an eroding barrier island beach

USGS Publications Warehouse

Fujisaki, Ikuko; Lamont, Margaret M.; Carthy, Raymond R.

2018-01-01

Shoreline changes affect functionality of a sandy beach as a wildlife habitat and coastal erosion is among the primary causes of the changes. We examined temporal shifts in locations where loggerheads placed nests in relation to coastal erosion along a barrier island beach in the northern Gulf of Mexico. We first confirmed consistency in long-term (1855–2001), short-term (1976–2001), and more recent (2002–2012) shoreline change rates in two adjacent beach sections, one historically eroding (west beach) and the other accreting (east beach). The mean annual shoreline change rate in the two sections was significantly different in all time periods. The recent (1998–2012) mean change rate was −10.9 ± 9.9 m/year in the west beach and −2.8 ± 4.9 m/year in the east beach, which resulted in the loss of about 70% and 30% of area in the west and east beaches, respectively. Loggerheads nested significantly closer to the vegetation line in 2012 than in 2002 in the west beach but the difference between the two time periods was not significant in the east beach. However, the distance from nests to the vegetation line from 2002 to 2014 was significantly reduced annually in both beaches; on average, loggerheads nested closer to the vegetation line by 9 m/year in the west beach and 5.8 m/year in the east beach. The observed shoreline change rate and corresponding shift of nest placement sites, combined with the forecasted future beach loss, highlighted the importance of addressing the issue of beach erosion to conserve sandy beach habitats.

Stable isotopic comparison between loggerhead sea turtle tissues.

PubMed

Vander Zanden, Hannah B; Tucker, Anton D; Bolten, Alan B; Reich, Kimberly J; Bjorndal, Karen A

2014-10-15

Stable isotope analysis has been used extensively to provide ecological information about diet and foraging location of many species. The difference in isotopic composition between animal tissue and its diet, or the diet-tissue discrimination factor, varies with tissue type. Therefore, direct comparisons between isotopic values of tissues are inaccurate without an appropriate conversion factor. We focus on the loggerhead sea turtle (Caretta caretta), for which a variety of tissues have been used to examine diet, habitat use, and migratory origin through stable isotope analysis. We calculated tissue-to-tissue conversions between two commonly sampled tissues. Epidermis and scute (the keratin covering on the carapace) were sampled from 33 adult loggerheads nesting at two beaches in Florida (Casey Key and Canaveral National Seashore). Carbon and nitrogen stable isotope ratios were measured in the epidermis and the youngest portion of the scute tissue, which reflect the isotopic composition of the diet and habitat over similar time periods of the order of several months. Significant linear relationships were observed between the δ(13)C and δ(15)N values of these two tissues, indicating they can be converted reliably. Whereas both epidermis and scute samples are commonly sampled from nesting sea turtles to study trophic ecology and habitat use, the data from these studies have not been comparable without reliable tissue-to-tissue conversions. The equations provided here allow isotopic datasets using the two tissues to be combined in previously published and subsequent studies of sea turtle foraging ecology and migratory movement. In addition, we recommend that future isotopic comparisons between tissues of any organism utilize linear regressions to calculate tissue-to-tissue conversions. Copyright © 2014 John Wiley & Sons, Ltd.

Are Coastal Protected Areas Always Effective in Achieving Population Recovery for Nesting Sea Turtles?

PubMed Central

Nel, Ronel; Punt, André E.; Hughes, George R.

2013-01-01

Sea turtles are highly migratory and usually dispersed, but aggregate off beaches during the nesting season, rendering them vulnerable to coastal threats. Consequently, coastal Marine Protection Areas (MPAs) have been used to facilitate the recovery of turtle populations, but the effectiveness of these programs is uncertain as most have been operating for less than a single turtle generation (or<20 yr). South Africa, however, hosts one of the longest running conservation programs, protecting nesting loggerhead (Caretta caretta) and leatherback (Dermochelys coriacea) turtles since 1963 in a series of coastal MPAs. This provides a unique opportunity to evaluate the long-term effect of spatial protection on the abundance of two highly migratory turtle species with different life history characteristics. Population responses were assessed by modeling the number of nests over time in an index area (13 km) and an expanded monitoring area (53 km) with varying survey effort. Loggerhead abundance increased dramatically from∼250 to>1700 nests pa (index area) especially over the last decade, while leatherback abundance increased initially∼10 to 70 nests pa (index area), but then stabilized. Although leatherbacks have higher reproductive output per female and comparable remigration periods and hatching success to loggerheads, the leatherback population failed to expand. Our results suggest that coastal MPAs can work but do not guarantee the recovery of sea turtle populations as pressures change over time. Causes considered for the lack of population growth include factors in the MPA (expansion into unmonitored areas or incubation environment) of outside of the MPA (including carrying capacity and fishing mortality). Conservation areas for migratory species thus require careful design to account for species-specific needs, and need to be monitored to keep track of changing pressures. PMID:23671683

Movements and habitat-use of loggerhead sea turtles in the northern Gulf of Mexico during the reproductive period.

PubMed

Hart, Kristen M; Lamont, Margaret M; Sartain, Autumn R; Fujisaki, Ikuko; Stephens, Brail S

2013-01-01

Nesting strategies and use of important in-water habitats for far-ranging marine turtles can be determined using satellite telemetry. Because of a lack of information on habitat-use by marine turtles in the northern Gulf of Mexico, we used satellite transmitters in 2010 through 2012 to track movements of 39 adult female breeding loggerhead turtles (Caretta caretta) tagged on nesting beaches at three sites in Florida and Alabama. During the nesting season, recaptured turtles emerged to nest 1 to 5 times, with mean distance between emergences of 27.5 km; however, several turtles nested on beaches separated by ~250 km within a single season. Mean total distances traveled throughout inter-nesting periods for all turtles was 1422.0 ± 930.8 km. In-water inter-nesting sites, delineated using 50% kernel density estimation (KDE), were located a mean distance of 33.0 km from land, in water with mean depth of -31.6 m; other in-water inter-nesting sites, delineated using minimum convex polygon (MCP) approach, were located a mean 13.8 km from land and in water with a mean depth of -15.8 m. Mean size of in-water inter-nesting habitats were 61.9 km(2) (50% KDEs, n = 10) and 741.4 km(2) (MCPs, n = 30); these areas overlapped significantly with trawling and oil and gas extraction activities. Abundance estimates for this nesting subpopulation may be inaccurate in light of how much spread there is between nests of the same individual. Further, our results also have consequences for critical habitat designations for northern Gulf loggerheads, as protection of one nesting beach would not encompass the entire range used by turtles during breeding seasons.

The effects of extended crawling on the physiology and swim performance of loggerhead and green sea turtle hatchlings.

PubMed

Pankaew, Karen; Milton, Sarah L

2018-01-04

Following emergence from the nest, sea turtle hatchling dispersal can be disrupted by artificial lights or skyglow from urban areas. Misorientation or disorientation may increase exposure to predation, thermal stress and dehydration, and consume valuable energy, thus decreasing the likelihood of survival. In this study hatchlings were run on a treadmill for 200 or 500 m to investigate the physiological impacts of disorientation crawling in loggerhead ( Caretta caretta ) and green ( Chelonia mydas ) sea turtle hatchlings. Oxygen consumption, lactate production and blood glucose levels were determined, and swim performance was measured over 2 h following crawls. Crawl distances were also determined for hatchlings that disoriented on the Boca Raton beach in Florida, with plasma lactate and blood glucose sampled for both properly oriented and disoriented hatchlings. Green and loggerhead hatchlings rested for 8-12% and 22-25% of crawl time, respectively, both in the laboratory and when disoriented on the beach, which was significantly longer than the time spent resting in non-disoriented turtles. As a result of these rest periods, the extended crawl distances had little effect on oxygen consumption, blood glucose or plasma lactate levels. Swim performance over 2 h following the crawls also changed little compared with controls. Plasma lactate concentrations were significantly higher in hatchlings sampled in the field, but did not correlate with crawl distance. The greatest immediate impact of extended crawling as a result of disorientation events is likely to be the significantly greater period of time spent on the beach and thus exposure to predation. © 2018. Published by The Company of Biologists Ltd.

Combined use of two supervised learning algorithms to model sea turtle behaviours from tri-axial acceleration data.

PubMed

Jeantet, L; Dell'Amico, F; Forin-Wiart, M-A; Coutant, M; Bonola, M; Etienne, D; Gresser, J; Regis, S; Lecerf, N; Lefebvre, F; de Thoisy, B; Le Maho, Y; Brucker, M; Châtelain, N; Laesser, R; Crenner, F; Handrich, Y; Wilson, R; Chevallier, D

2018-05-23

Accelerometers are becoming ever more important sensors in animal-attached technology, providing data that allow determination of body posture and movement and thereby helping to elucidate behaviour in animals that are difficult to observe. We sought to validate the identification of sea turtle behaviours from accelerometer signals by deploying tags on the carapace of a juvenile loggerhead ( Caretta caretta ), an adult hawksbill ( Eretmochelys imbricata ) and an adult green turtle ( Chelonia mydas ) at Aquarium La Rochelle, France. We recorded tri-axial acceleration at 50 Hz for each species for a full day while two fixed cameras recorded their behaviours. We identified behaviours from the acceleration data using two different supervised learning algorithms, Random Forest and Classification And Regression Tree (CART), treating the data from the adult animals as separate from the juvenile data. We achieved a global accuracy of 81.30% for the adult hawksbill and green turtle CART model and 71.63% for the juvenile loggerhead, identifying 10 and 12 different behaviours, respectively. Equivalent figures were 86.96% for the adult hawksbill and green turtle Random Forest model and 79.49% for the juvenile loggerhead, for the same behaviours. The use of Random Forest combined with CART algorithms allowed us to understand the decision rules implicated in behaviour discrimination, and thus remove or group together some 'confused' or under--represented behaviours in order to get the most accurate models. This study is the first to validate accelerometer data to identify turtle behaviours and the approach can now be tested on other captive sea turtle species. © 2018. Published by The Company of Biologists Ltd.

Growth dynamics of juvenile loggerhead sea turtles undergoing an ontogenetic habitat shift.

PubMed

Ramirez, Matthew D; Avens, Larisa; Seminoff, Jeffrey A; Goshe, Lisa R; Heppell, Selina S

2017-04-01

Ontogenetic niche theory predicts that individuals may undergo one or more changes in habitat or diet throughout their lifetime to maintain optimal growth rates, or to optimize trade-offs between mortality risk and growth. We combine skeletochronological and stable nitrogen isotope (δ 15 N) analyses of sea turtle humeri (n = 61) to characterize the growth dynamics of juvenile loggerhead sea turtles (Caretta caretta) during an oceanic-to-neritic ontogenetic shift. The primary objective of this study was to determine how ontogenetic niche theory extends to sea turtles, and to individuals with different patterns of resource use (discrete shifters, n = 23; facultative shifters n = 14; non-shifters, n = 24). Mean growth rates peaked at the start of the ontogenetic shift (based on change in δ 15 N values), but returned to pre-shift levels within 2 years. Turtles generally only experienced 1 year of relatively high growth, but the timing of peak growth relative to the start of an ontogenetic shift varied among individuals (before, n = 14; during, n = 12; after, n = 8). Furthermore, no reduction in growth preceded the transition, as is predicted by ontogenetic niche theory. Annual growth rates were similar between non-transitioning turtles resident in oceanic and neritic habitats and turtles displaying alternative patterns of resource use. These results suggest that factors other than maximization of size-specific growth may more strongly influence the timing of ontogenetic shifts in loggerhead sea turtles, and that alternative patterns of resource use may have limited influence on somatic growth and age at maturation in this species.

Ontogenetic investigation of underwater hearing capabilities in loggerhead sea turtles (Caretta caretta) using a dual testing approach.

PubMed

Lavender, Ashley L; Bartol, Soraya M; Bartol, Ian K

2014-07-15

Sea turtles reside in different acoustic environments with each life history stage and may have different hearing capacity throughout ontogeny. For this study, two independent yet complementary techniques for hearing assessment, i.e. behavioral and electrophysiological audiometry, were employed to (1) measure hearing in post-hatchling and juvenile loggerhead sea turtles Caretta caretta (19-62 cm straight carapace length) to determine whether these migratory turtles exhibit an ontogenetic shift in underwater auditory detection and (2) evaluate whether hearing frequency range and threshold sensitivity are consistent in behavioral and electrophysiological tests. Behavioral trials first required training turtles to respond to known frequencies, a multi-stage, time-intensive process, and then recording their behavior when they were presented with sound stimuli from an underwater speaker using a two-response forced-choice paradigm. Electrophysiological experiments involved submerging restrained, fully conscious turtles just below the air-water interface and recording auditory evoked potentials (AEPs) when sound stimuli were presented using an underwater speaker. No significant differences in behavior-derived auditory thresholds or AEP-derived auditory thresholds were detected between post-hatchling and juvenile sea turtles. While hearing frequency range (50-1000/1100 Hz) and highest sensitivity (100-400 Hz) were consistent in audiograms pooled by size class for both behavior and AEP experiments, both post-hatchlings and juveniles had significantly higher AEP-derived than behavior-derived auditory thresholds, indicating that behavioral assessment is a more sensitive testing approach. The results from this study suggest that post-hatchling and juvenile loggerhead sea turtles are low-frequency specialists, exhibiting little differences in threshold sensitivity and frequency bandwidth despite residence in acoustically distinct environments throughout ontogeny. © 2014. Published by The Company of Biologists Ltd.

Intrapopulation variability in the timing of ontogenetic habitat shifts in sea turtles revealed using δ15 N values from bone growth rings.

PubMed

Turner Tomaszewicz, Calandra N; Seminoff, Jeffrey A; Peckham, S Hoyt; Avens, Larisa; Kurle, Carolyn M

2017-05-01

Determining location and timing of ontogenetic shifts in the habitat use of highly migratory species, along with possible intrapopulation variation in these shifts, is essential for understanding mechanisms driving alternate life histories and assessing overall population trends. Measuring variations in multi-year habitat-use patterns is especially difficult for remote oceanic species. To investigate the potential for differential habitat use among migratory marine vertebrates, we measured the naturally occurring stable nitrogen isotope (δ 15 N) patterns that differentiate distinct ocean regions to create a 'regional isotope characterization', analysed the δ 15 N values from annual bone growth layer rings from dead-stranded animals, and then combined the bone and regional isotope data to track individual animal movement patterns over multiple years. We used humeri from juvenile North Pacific loggerhead turtles (Caretta caretta), animals that undergo long migrations across the North Pacific Ocean (NPO), using multiple discrete regions as they develop to adulthood. Typical of many migratory marine species, ontogenetic changes in habitat use throughout their decades-long juvenile stage is poorly understood, but each potential habitat has unique foraging opportunities and spatially explicit natural and anthropogenic threats that could affect key life-history parameters. We found a bimodal size/age distribution in the timing that juveniles underwent an ontogenetic habitat shift from the oceanic central North Pacific (CNP) to the neritic east Pacific region near the Baja California Peninsula (BCP) (42·7 ± 7·2 vs. 68·3 ± 3·4 cm carapace length, 7·5 ± 2·7 vs. 15·6 ± 1·7 years). Important to the survival of this population, these disparate habitats differ considerably in their food availability, energy requirements and threats, and these differences can influence life-history parameters such as growth, survival and future fecundity. This is the first evidence of alternative ontogenetic shifts and habitat-use patterns for juveniles foraging in the eastern NPO. We combine two techniques, skeletochronology and stable isotope analysis, to reconstruct multi-year habitat-use patterns of a remote migratory species, linked to estimated ages and body sizes of individuals, to reveal variable ontogeny during the juvenile life stage that could drive alternate life histories and that has the potential to illuminate the migration patterns for other species with accretionary tissues. © 2016 The Authors. Journal of Animal Ecology © 2016 British Ecological Society.

50 CFR 226.223 - Critical habitat for the Northwest Atlantic Ocean Distinct Population Segment of the loggerhead...

Code of Federal Regulations, 2014 CFR

2014-10-01

...) LOGG-N-15—Northern Boundary of River to Sea Preserve at Marineland to Granada Blvd., Flagler and... unit are nearshore areas from the north boundary of River to Sea Preserve at Marineland to Granada...

Blood biochemistry reference values for wild juvenile loggerhead sea turtles (Caretta caretta) from Madeira archipelago.

PubMed

Delgado, Cláudia; Valente, Ana; Quaresma, Isabel; Costa, Margarida; Dellinger, Thomas

2011-07-01

Standard biochemical parameters were determined in wild juvenile loggerhead sea turtles Caretta caretta living offshore Madeira Island, northeast Atlantic. We analyzed the influence of age, sex, sea surface temperature, and body condition index on biochemical parameters including uric acid, total bilirubin, total cholesterol, creatinine kinase (CK), glucose, total protein, urea nitrogen, lactate dehydrogenase, aspartate aminotranspherase (AST), gamma-glutamyl transferase (GGT), albumin, alkaline phosphatase (ALP), sodium (NA), potassium (K), chloride, calcium, phosphorus, and magnesium. Significant positive correlations were found between turtle body size and total cholesterol, total protein, and albumin. Total protein and the enzymes AST and CK were lower than reported levels in adults. Calcium levels were lower than those reported in adult or captive turtles, but similar to wild juveniles from Australian waters, and were interpreted as normal for this age category. These data may be useful to evaluate the health status of stranded or injured animals and to improve veterinary care at rehabilitation centers.

Marine debris and human impacts on sea turtles in southern Brazil.

PubMed

Bugoni, L; Krause, L; Petry, M V

2001-12-01

Dead stranded sea turtles were recovered and examined to determine the impact of anthropogenic debris and fishery activities on sea turtles on the coast of Rio Grande do Sul State, Brazil. Esophagus/stomach contents of 38 juvenile green Chelonia mydas, 10 adults and sub-adults loggerhead Caretta caretta, and two leatherback Dermochelys coriacea turtles (adult or sub-adult) included plastic bags as the main debris ingested, predominated by white and colorless pieces. The ingestion of anthropogenic debris accounted for the death of 13.2% of the green turtles examined. Signs of damage over the body and carapace indicated that fishing activities caused the death of 13.6% (3/22) of loggerheads and 1.5% (1/56) of green turtles. Therefore, it appears that direct and indirect effects of fishing activities may pose a threat to these species in Brazilian waters. Other sources of plastic debris should be investigated as well as the direct impact of fisheries, especially bottom trawl and gill nets, in order to establish effective conservation action.

Phylogenetic analysis of the Pacific cutthroat trout (Oncorhynchus clarki ssp.: Salmonidae) based on partial mtDNA ND4 sequences: a closer look at the highly fragmented inland species.

PubMed

Wilson, Wade D; Turner, Thomas F

2009-08-01

The genus Oncorhynchus includes Pacific salmon and trout (anadromous and land-locked) species of the western United States and Mexico. All species and subspecies in this group are threatened, endangered, sensitive, or species of conservation concern in portions of their native ranges. To examine the relationships of the species within Oncorhynchus we sequenced a 768 bp fragment of the protein-encoding ND4 mtDNA region. We included all six recognized subspecies of O. clarki (cutthroat trout), O. gilaegilae (Gila trout) and O. g. apache (Apache trout). Gene trees from likelihood and Bayesian phylogenetic analyses revealed that Salvelinus was the sister group to Oncorhynchus, and as expected based on previous studies, O. clarki was sister to a clade that consisted of O. mykiss plus O. g. gilae and O. g. apache. Within the cutthroat clade (O. clarki), the coastal form O. c. clarki was basal with the Rio Grande cutthroat (O. c. virginalis) most derived. Divergence dating based on a fossil calibration molecular clock showed the oldest clade (mean node age) was O. masou ssp., which diverged roughly 7.6 MYA. Highest probability density intervals for divergence of O. masou overlapped with divergence (6.3 MYA) of Pacific salmon clades ((O. gorbuscha + O. nerka) and (O. tshawytscha + O. kisutch)). The Pacific trout clade ((O. mykiss + O. gilae ssp.) + (O. clarki ssp.)) diverged from the Pacific salmon around 6.3 MYA, with most of the diversification within the O. clarki clade occurring in the last 1 MY.

Derivation and characterization of cell cultures from the skin of the Indo-Pacific humpback dolphin Sousa chinensis.

PubMed

Jin, Wei; Jia, Kuntong; Yang, Lili; Chen, Jialin; Wu, Yuping; Yi, Meisheng

2013-06-01

The marine mammalian Indo-Pacific humpback dolphin, once widely lived in waters of the Indian to western Pacific oceans, has become an endangered species. The individual number of this dolphin has significantly declined in recent decades, which raises the concern of extinction. Direct concentration on laboratorial conservation of the genetic and cell resources should be paid to this marine species. Here, we report the successful derivation of cell lines form the skin of Indo-Pacific humpback dolphin. The cell cultures displayed the characteristics of fibroblast in morphology and grew rapidly at early passages, but showed obvious growth arrest at higher passages. The karyotype of the cells consisted of 42 autosomes and sex chromosomes X and Y. The immortalized cell lines obtained by forced expression of the SV40 large T-antigen were capable of proliferation at high rate in long-term culture. Immortalization and long-term culture did not cause cytogenetically observable abnormality in the karyotype. The cell type of the primary cultures and immortalized cell lines were further characterized as fibroblasts by the specific expression of vimentin. Gene transfer experiments showed that exogenetic genes could be efficiently delivered into the cells by both plasmid transfection and lentivirus infection. The cells derived from the skin of the Indo-Pacific humpback dolphin may serve as a useful in vitro system for studies on the effects of environmental pollutants and pathogens in habitats on the dolphin animals. More importantly, because of their high proliferation rate and susceptibility to lentivirus, these cells are potential ideal materials for generation of induced pluripotent stem cells.

Endangered species management and ecosystem restoration: Finding the common ground

USGS Publications Warehouse

Casazza, Michael L.; Overton, Cory T.; Bui, Thuy-Vy D.; Hull, Joshua M.; Albertson, Joy D.; Bloom, Valary K.; Bobzien, Steven; McBroom, Jennifer; Latta, Marilyn; Olofson, Peggy; Rohmer, Tobias M.; Schwarzbach, Steven E.; Strong, Donald R.; Grijalva, Erik; Wood, Julian K.; Skalos, Shannon; Takekawa, John Y.

2016-01-01

Management actions to protect endangered species and conserve ecosystem function may not always be in precise alignment. Efforts to recover the California Ridgway’s Rail (Rallus obsoletus obsoletus; hereafter, California rail), a federally and state-listed species, and restoration of tidal marsh ecosystems in the San Francisco Bay estuary provide a prime example of habitat restoration that has conflicted with species conservation. On the brink of extinction from habitat loss and degradation, and non-native predators in the 1990s, California rail populations responded positively to introduction of a non-native plant, Atlantic cordgrass (Spartina alterniflora). California rail populations were in substantial decline when the non-native Spartina was initially introduced as part of efforts to recover tidal marshes. Subsequent hybridization with the native Pacific cordgrass (Spartina foliosa) boosted California rail populations by providing greater cover and increased habitat area. The hybrid cordgrass (S. alterniflora × S. foliosa) readily invaded tidal mudflats and channels, and both crowded out native tidal marsh plants and increased sediment accretion in the marsh plain. This resulted in modification of tidal marsh geomorphology, hydrology, productivity, and species composition. Our results show that denser California rail populations occur in invasive Spartina than in native Spartina in San Francisco Bay. Herbicide treatment between 2005 and 2012 removed invasive Spartina from open intertidal mud and preserved foraging habitat for shorebirds. However, removal of invasive Spartina caused substantial decreases in California rail populations. Unknown facets of California rail ecology, undesirable interim stages of tidal marsh restoration, and competing management objectives among stakeholders resulted in management planning for endangered species or ecosystem restoration that favored one goal over the other. We have examined this perceived conflict and propose strategies for moderating harmful effects of restoration while meeting the needs of both endangered species and the imperiled native marsh ecosystem.

77 FR 27719 - Marine Mammals; File Nos. 16109 and 15575

Federal Register 2010, 2011, 2012, 2013, 2014

2012-05-11

... (Megaptera novaeangliae), North Atlantic right whale (Eubalaena glacialis), sei whale (B. borealis), sperm..., sei whale, sperm whale, green sea turtle, hawksbill sea turtle, loggerhead sea turtle, Kemp's ridley... in the EA, NMFS determined that issuance of the permits would not significantly impact the quality of...

Northwest Area Science

USGS Publications Warehouse

Fuentes, Tracy L.; van Heeswijk, Marijke; Grossman, Eric E.

2010-01-01

Northwest Area Facts * Population about 12 million * 43 federally recognized Tribes * Hydropower provides about two-thirds of electricity supply * 78 federally listed threatened and endangered species * 12 active or potentially active volcanoes * Columbia River system drains more than 260,000 square miles, an area about the size of Texas * More than 175 square miles covered by glaciers * More than 900 miles of Pacific Ocean coastline * More than 2,300 miles of greater Puget Sound coastline * Some forests store more carbon per unit area than any other area in the world, including the tropics * 51 percent federal lands * Significant lead, zinc, silver, and phosphate deposits

KSC-07pd0873

NASA Image and Video Library

2007-04-11

KENNEDY SPACE CENTER, FLA. -- A female greater scaup duck (right) follows her mate through the water on Kennedy Space Center. Normally found in Alaska and northern Canada, this species winters along the Atlantic, Pacific and Gulf coasts. KSC shares a boundary with the Merritt Island Wildlife Nature Refuge. The refuge is a habitat for more than 310 species of birds, 25 mammals, 117 fishes and 65 amphibians and reptiles. In addition, the Refuge supports 19 endangered or threatened wildlife species on Federal or State lists, more than any other single refuge in the U.S. Photo credit: NASA/Dimitri Gerondidakis

Evidence for Bombus occidentalis (Hymenoptera: Apidae) Populations in the Olympic Peninsula, the Palouse Prairie, and Forests of Northern Idaho

PubMed Central

Rhoades, Paul R.; Koch, Jonathan B.; Waits, Lisette P.; Strange, James P.; Eigenbrode, Sanford D.

2016-01-01

Since the mid-1990s, Bombus occidentalis (Green) has declined from being one of the most common to one of the rarest bumble bee species in the Pacific Northwest of the United States. Although its conservation status is unresolved, a petition to list this species as endangered or threatened was recently submitted to the U.S. Fish and Wildlife Service. To shed light on the conservation situation and inform the U.S. Fish and Wildlife Service decision, we report on the detection and abundance of B. occidentalis following bumble bee collection between 2012 and 2014 across the Pacific Northwest. Collection occurred from the San Juan Islands and Olympic peninsula east to northern Idaho and northeastern Oregon, excluding the arid region in central Washington. B. occidentalis was observed at 23 collection sites out of a total of 234. With the exception of three sites on the Olympic peninsula, all of these were in the southeastern portion of the collection range. PMID:26856817

Habitat occupancy and detection of the pacific sheath-tailed bat (emballonura semicaudata) on aguiguan, commonwealth of the northern Mariana Islands

USGS Publications Warehouse

Gorresen, P.M.; Bonaccorso, F.J.; Pinzari, C.A.

2009-01-01

Occupancy analysis was used to quantify Pacific sheath-tailed bat (Emballonura semicaudata) foraging activity and its relationship to forest structure and proximity to cave roosts on Aguiguan Island in the Commonwealth of the Northern Mariana Islands. Bat occurrence was most closely associated with canopy cover, vegetation stature and distance to known roosts. The metrics generated by this study can serve as a quantitative baseline for future assessments of the status of this endangered species following changes in habitat due to management activities (e.g., feral goat control) or other factors (e.g., typhoon impacts). Additionally, we provide quantitative descriptions of the echolocation calls of E. semicaudata. Search-phase calls were characterized by a relatively narrow bandwidth and short pulse duration typical of insectivores that forage within vegetative clutter. Two distinctly characteristic frequencies were recorded: 30.97 ?? 1.08 kHz and 63.15 ?? 2.20 kHz ?? Museum and Institute of Zoology PAS.

National Training Center Fort Irwin expansion area aquatic resources survey

DOE Office of Scientific and Technical Information (OSTI.GOV)

Cushing, C.E.; Mueller, R.P.

1996-02-01

Biologists from Pacific Northwest National Laboratory (PNNL) were requested by personnel from Fort Irwin to conduct a biological reconnaissance of the Avawatz Mountains northeast of Fort Irwin, an area for proposed expansion of the Fort. Surveys of vegetation, small mammals, birds, reptiles, amphibians, and aquatic resources were conducted during 1995 to characterize the populations and habitats present with emphasis on determining the presence of any species of special concern. This report presents a description of the sites sampled, a list of the organisms found and identified, and a discussion of relative abundance. Taxonomic identifications were done to the lowest levelmore » possible commensurate with determining the status of the taxa relative to its possible listing as a threatened, endangered, or candidate species. Consultation with taxonomic experts was undertaken for the Coleoptera ahd Hemiptera. In addition to listing the macroinvertebrates found, the authors also present a discussion related to the possible presence of any threatened or endangered species or species of concern found in Sheep Creek Springs, Tin Cabin Springs, and the Amargosa River.« less

Stable isotope analysis and satellite tracking reveal interspecific resource partitioning of nonbreeding albatrosses off Alaska

USGS Publications Warehouse

Suryan, R.M.; Fischer, K.N.

2010-01-01

Albatrosses (Diomedeidae) are the most threatened family of birds globally. The three North Pacific species (Phoebastria Reichenbach, 1853) are listed as either endangered or vulnerable, with the population of Short-tailed Albatross (Phoebastria albatrus (Pallas, 1769)) less than 1% of its historical size. All North Pacific albatross species do not currently breed sympatrically, yet they do co-occur at-sea during the nonbreeding season. We incorporated stable isotope analysis with the first simultaneous satellite-tracking study of all three North Pacific albatross species while sympatric on summer (nonbreeding season) foraging grounds off Alaska. Carbon isotope ratios and tracking data identify differences in primary foraging domains of continental shelf and slope waters for Short-tailed Albatrosses and Black-footed Albatrosses (Phoebastria nigripes (Audubon, 1839)) versus oceanic waters for Laysan Albatrosses (Phoebastria immutabilis (Roths-child, 1893)). Short-tailed and Black-footed albatrosses also fed at higher trophic levels than Laysan Albatrosses. The relative trophic position of Black-footed and Laysan albatrosses, however, appears to differ between nonbreeding and breeding seasons. Spatial segregation also occurred at a broader geographic scale, with Short-tailed Albatrosses ranging more north into the Bering Sea than Black-footed Albatrosses, which ranged more to the southeast, and Laysan Albatrosses more to the southwest. Differences in carbon isotope ratios among North Pacific albatross species during the nonbreeding season likely reflect the relative proportion of neritic (more carbon enriched) versus oceanic (carbon depleted) derived nutrients, and possible differential use of fishery discards, rather than latitudinal differences in distribution.

The Trophic Significance of the Indo-Pacific Humpback Dolphin, Sousa chinensis, in Western Taiwan.

PubMed

Pan, Ching-Wen; Chen, Meng-Hsien; Chou, Lien-Siang; Lin, Hsing-Juh

2016-01-01

Indo-Pacific humpback dolphins (Sousa chinensis) have attracted considerable attention due to their critically endangered status and related conservation issues, but their trophic relationships and ecological significance in coastal ecosystems are poorly understood. For instance, this species is noticeably more abundant in the Xin-Huwei River Estuary (Ex) of Western Taiwan than in the nearby Zhuoshui River Estuary (Ez), though it is unclear why the distribution shows such partitioning. To explore this topic, we conducted field surveys seasonally for two years from 2012 to 2013 and constructed Ecopath models of Ex, Ez, and an offshore site (Dm) to compare energy flow within the food webs. Model comparisons showed that the availability of food resources was the main factor influencing the biomass of Indo-Pacific humpback dolphins. Specifically, its more frequent occurrence in Ex can be attributed to greater phytoplankton production and greater biomasses of macroinvertebrates and prey fish than in the other two areas. An increase in fishing activity might decrease the food availability and, consequently, the biomass of the dolphins. Although the decline in the dolphin population would increase the biomass of some prey fish species, local fishermen might not necessarily benefit from the decline due to the concurrent decrease of highly valued crabs and shrimp. Collectively, our work suggests that the Indo-Pacific humpback dolphin is a keystone species in tropical coastal waters of Taiwan, and thereby exhibit a disproportional large ecological impact given their relatively low abundance.

The Trophic Significance of the Indo-Pacific Humpback Dolphin, Sousa chinensis, in Western Taiwan

PubMed Central

Pan, Ching-Wen; Chen, Meng-Hsien; Chou, Lien-Siang; Lin, Hsing-Juh

2016-01-01

Indo-Pacific humpback dolphins (Sousa chinensis) have attracted considerable attention due to their critically endangered status and related conservation issues, but their trophic relationships and ecological significance in coastal ecosystems are poorly understood. For instance, this species is noticeably more abundant in the Xin-Huwei River Estuary (Ex) of Western Taiwan than in the nearby Zhuoshui River Estuary (Ez), though it is unclear why the distribution shows such partitioning. To explore this topic, we conducted field surveys seasonally for two years from 2012 to 2013 and constructed Ecopath models of Ex, Ez, and an offshore site (Dm) to compare energy flow within the food webs. Model comparisons showed that the availability of food resources was the main factor influencing the biomass of Indo-Pacific humpback dolphins. Specifically, its more frequent occurrence in Ex can be attributed to greater phytoplankton production and greater biomasses of macroinvertebrates and prey fish than in the other two areas. An increase in fishing activity might decrease the food availability and, consequently, the biomass of the dolphins. Although the decline in the dolphin population would increase the biomass of some prey fish species, local fishermen might not necessarily benefit from the decline due to the concurrent decrease of highly valued crabs and shrimp. Collectively, our work suggests that the Indo-Pacific humpback dolphin is a keystone species in tropical coastal waters of Taiwan, and thereby exhibit a disproportional large ecological impact given their relatively low abundance. PMID:27780252

AFLP diversity and spatial structure of Calycophyllum candidissimum (Rubiaceae), a dominant tree species of Nicaragua's critically endangered seasonally dry forest.

PubMed

Dávila-Lara, A; Affenzeller, M; Tribsch, A; Díaz, V; Comes, H P

2017-10-01

The Central American seasonally dry tropical (SDT) forest biome is one of the worlds' most endangered ecosystems, yet little is known about the genetic consequences of its recent fragmentation. A prominent constituent of this biome is Calycophyllum candidissimum, an insect-pollinated and wind-dispersed canopy tree of high socio-economic importance, particularly in Nicaragua. Here, we surveyed amplified fragment length polymorphisms across 13 populations of this species in Nicaragua to elucidate the relative roles of contemporary vs historical factors in shaping its genetic variation. Genetic diversity was low in all investigated populations (mean H E =0.125), and negatively correlated with latitude. Overall population differentiation was moderate (Φ ST =0.109, P<0.001), and Bayesian analysis of population structure revealed two major latitudinal clusters (I: 'Pacific North'+'Central Highland'; II: 'Pacific South'), along with a genetic cline between I and II. Population-based cluster analyses indicated a strong pattern of 'isolation by distance' as confirmed by Mantel's test. Our results suggest that (1) the low genetic diversity of these populations reflects biogeographic/population history (colonisation from South America, Pleistocene range contractions) rather than recent human impact; whereas (2) the underlying process of their isolation by distance pattern, which is best explained by 'isolation by dispersal limitation', implies contemporary gene flow between neighbouring populations as likely facilitated by the species' efficient seed dispersal capacity. Overall, these results underscore that even tree species from highly decimated forest regions may be genetically resilient to habitat fragmentation due to species-typical dispersal characteristics, the necessity of broad-scale measures for their conservation notwithstanding.

Temporal increase in organic mercury in an endangered pelagic seabird assessed by century-old museum specimens

PubMed Central

Vo, Anh-Thu E.; Bank, Michael S.; Shine, James P.; Edwards, Scott V.

2011-01-01

Methylmercury cycling in the Pacific Ocean has garnered significant attention in recent years, especially with regard to rising mercury emissions from Asia. Uncertainty exists concerning whether increases in anthropogenic emissions over time may have caused increased mercury bioaccumulation in the biota. To address this, we measured total mercury and, for a subset of samples, methylmercury (the bioaccumulated form of mercury) in museum feathers from an endangered seabird, the black-footed albatross (Phoebastria nigripes), spanning a 120-y period. We analyzed stable isotopes of nitrogen (δ15N) and carbon (δ13C) to control for temporal changes in trophic structure and diet. In post-1940 and -1990 feathers, we detected significantly higher mean methylmercury concentrations and higher proportions of samples exhibiting above deleterious threshold levels (∼40,000 ng·g−1) of methylmercury relative to prior time points, suggesting that mercury toxicity may undermine reproductive effort in the species. We also found higher levels of (presumably curator-mediated) inorganic mercury in older specimens of albatross as well as two nonpelagic species lacking historical exposure to bioavailable mercury, patterns suggesting that studies on bioaccumulation should measure methylmercury rather than total mercury when using museum collections. δ15N contributed substantially to models explaining the observed methylmercury variation. After simultaneously controlling for significant trends in δ13C over time and δ15N with methylmercury exposure, year remained a significant independent covariate with feather methylmercury levels among the albatrosses. These data show that remote seabird colonies in the Pacific basin exhibit temporal changes in methylmercury levels consistent with historical global and recent regional increases in anthropogenic emissions. PMID:21502496

INFECTIOUS DISEASE AND TOXICOLOGICAL MONITORING OF STRANDED PACIFIC HARBOR SEALS (PHOCA VITULINA RICHARDSI) IN COOK INLET AS SURROGATES FOR MONITORING ENDANGERED BELUGAS (DELPHINAPTERUS LEUCAS).

PubMed

Bauer, Kendra L; Goertz, Caroline E C; Belovarac, Jane A; Walton, Robert W; Dunn, J Lawrence; Tuomi, Pamela

2016-09-01

  Pacific harbor seals ( Phoca vitulina richardsi) and belugas ( Delphinapterus leucas ) eat many of the same prey species, occupy the same geographic area, and demonstrate site fidelity in Cook Inlet, Alaska. Although most direct research involving the critically endangered belugas is currently prohibited, studying harbor seals may provide important information about this beluga population. In recent years, harbor seal populations in Alaska have declined for unknown reasons. As part of its stranding program, the Alaska SeaLife Center (ASLC) managed 59 cases of live and dead stranded harbor seals from Cook Inlet between 1997 and 2011. Animals were screened for a variety of diseases and contaminants of concern. Animals were negative by serology to the following diseases: avian influenza, canine distemper virus, dolphin morbillivirus, porpoise morbillivirus, Leptospira canicola, L. grippotyphosa, L. pomona, Neospora caninum , Sarcocystis neurona , and Toxoplasma gondii . Positive titers were found against Brucella spp., phocine distemper virus, seal herpesvirus-1, L. bratislava, L. hardjo, and L. icterohemorrhagiae. All titers were stable or declining except in one animal with an increasing titer for seal herpesvirus-1. Fecal pathogen screenings identified normal flora as well as stable or declining low levels of potentially pathogenic and opportunistic bacteria, though most were of little concern for seal health. In most animals, toxicology screening showed that the majority of tested contaminants were below detectable limits. The level of evidence of exposure to pathogens of concern was low in harbor seals. Although the infectious disease burden and contaminant levels in belugas in Cook Inlet cannot be definitively determined without direct testing, pathogen and contaminant exposure is expected to be similar to that found in harbor seals in this region, as the harbor seals and belugas share the habitat and food resources.

Tracing the spatio-temporal dynamics of endangered fin whales (Balaenoptera physalus) within baleen whale (Mysticeti) lineages: a mitogenomic perspective.

PubMed

Yu, Jihyun; Nam, Bo-Hye; Yoon, Joon; Kim, Eun Bae; Park, Jung Youn; Kim, Heebal; Yoon, Sook Hee

2017-12-01

To explore the spatio-temporal dynamics of endangered fin whales (Balaenoptera physalus) within the baleen whale (Mysticeti) lineages, we analyzed 148 published mitochondrial genome sequences of baleen whales. We used a Bayesian coalescent approach as well as Bayesian inferences and maximum likelihood methods. The results showed that the fin whales had a single maternal origin, and that there is a significant correlation between geographic location and evolution of global fin whales. The most recent common female ancestor of this species lived approximately 9.88 million years ago (Mya). Here, North Pacific fin whales first appeared about 7.48 Mya, followed by a subsequent divergence in Southern Hemisphere approximately 6.63 Mya and North Atlantic about 4.42 Mya. Relatively recently, approximately 1.76 and 1.42 Mya, there were two additional occurrences of North Pacific populations; one originated from the Southern Hemisphere and the other from an uncertain location. The evolutionary rate of this species was 1.002 × 10 -3 substitutions/site/My. Our Bayesian skyline plot illustrates that the fin whale population has the rapid expansion event since ~ 2.5 Mya, during the Quaternary glaciation stage. Additionally, this study indicates that the fin whale has a sister group relationship with humpback whale (Meganoptera novaeangliae) within the baleen whale lineages. Of the 16 genomic regions, NADH5 showed the most powerful signal for baleen whale phylogenetics. Interestingly, fin whales have 16 species-specific amino acid residues in eight mitochondrial genes: NADH2, COX2, COX3, ATPase6, ATPase8, NADH4, NADH5, and Cytb.

Qualitative Assessment: Evaluating the Impacts of Climate ...

EPA Pesticide Factsheets

The South Fork Nooksack River (South Fork) is located in northwest Washington State and is home to nine species of Pacific salmon, including Nooksack early Chinook (aka, spring Chinook salmon), an iconic species for the Nooksack Indian Tribe. The quantity of salmon in the South Fork, especially spring Chinook salmon, has dramatically declined from historic levels, due primarily to habitat degradation from the legacy impacts of various land uses such as commercial forestry, agriculture, flood control, and transportation infrastructure. Segments of the South Fork and some of its tributaries exceed temperature criteria established for the protection of cold-water salmonid populations, and were listed on Washington State’s Clean Water Act (CWA) 303(d) list of impaired waterbodies. High water temperatures in the South Fork are detrimental to fish and other native species that depend on cool, clean, well-oxygenated water. Of the nine salmon species, three have been listed as threatened under the federal Endangered Species Act (ESA) and are of high priority to restoration efforts in the South Fork—spring Chinook salmon, summer steelhead trout, and bull trout. Growing evidence shows that climate change will exacerbate legacy impacts. This qualitative assessment is a comprehensive analysis of climate change impacts on freshwater habitat and Pacific salmon in the South Fork. It also evaluates the effectiveness of restoration tools that address Pacific salmon recovery.

A biological framework for evaluating whether a species is threatened or endangered in a significant portion of its range.

PubMed

Waples, Robin S; Adams, Peter B; Bohnsack, James; Taylor, Barbara L

2007-08-01

Under the U.S. Endangered Species Act (ESA), a species can be listed if it is at risk "in all or a significant portion of its range," but the ESA provides no guidance on how to interpret this key phrase. We propose a simple test to determine whether the areas of a species' range in which it is currently at risk amount to a significant portion: If the species were to become extirpated from these areas, at that point would the entire species be at risk? If so, then these areas represent a significant portion of the species' range. By establishing the species itself as the point of reference for determining significance, this test directs attention to biological risk factors and avoids difficulties inherent in subjective evaluations of importance to humans. For broadly distributed species this framework could provide ESA protection due to cumulative risks before the entire species met the criteria to be considered threatened or endangered. This framework also allows a somewhat broader concept of range to include major components of diversity necessary for long-term persistence. The concept of a historical template (i.e., conditions under which the species was known to be viable) is important in providing a fixed reference point for evaluating viability. Empirical examples illustrate how these concepts have been applied in recent ESA listing determinations. Most ESA-listed units of Pacific salmon (Oncorhynchus spp.) can be divided into multiple strata that differ in terms of ecology, geology, or life-history traits of the component populations. The goal of ESA recovery planning is to restore viable populations in enough strata that the listed unit as a whole is no longer threatened or endangered in all or a significant portion of its range. In a recent review of Pacific herring (Clupea pallasii) in Puget Sound, current status (some populations increasing and others declining) was evaluated in the context of the historical template, and it was concluded that current patterns of distribution and abundance do not depart substantially from what would be expected at any point in time under natural conditions in a large metapopulation. The Canadian lynx (Lynx canadensis) is ESA listed in the contiguous United States, where it occurs in four geographic areas. Populations in one region, the Northern Rockies/Cascades, have always been the most important for long-term persistence of the species in the United States. Because the other regions never contained more than limited amounts of good-quality lynx habitat, those areas are not considered to represent a significant portion of the species' range.

Forecasts for NOAA Marine Sanctuaries

Science.gov Websites

/Forecast The Gray's Reef Sea Turtle Satellite Tagging Project utilizes satellite transmitter tags to Synopsis/Forecast(0-20nm) Synopsis/Forecast(20-60nm) The Gray's Reef Sea Turtle Satellite Tagging Project utilizes satellite transmitter tags to monitor adult and juvenile loggerhead sea click image for more

76 FR 61670 - Receipt of an Application for Incidental Take Permit (16230)

Federal Register 2010, 2011, 2012, 2013, 2014

2011-10-05

... sensitive or protected information. NMFS will accept anonymous comments (enter ``N/A'' in the required... incidental to, and not the purpose of, otherwise lawful activities. Section 10(a)(1)(B) of the ESA provides... species are included in the conservation plan and Permit application: Loggerhead (Caretta caretta), green...

Interaction between loggerhead sea turtles (Caretta caretta) and marine litter in Sardinia (Western Mediterranean Sea).

PubMed

Camedda, Andrea; Marra, Stefano; Matiddi, Marco; Massaro, Giorgio; Coppa, Stefania; Perilli, Angelo; Ruiu, Angelo; Briguglio, Paolo; de Lucia, G Andrea

2014-09-01

Anthropogenic debris in the environment affects many species that accidentally ingest it. The aim of this study is to evaluate the quantity and composition of marine litter ingested by loggerheads in Sardinia, thus supplying for the lack of data in the existing literature for this area. Seventeen of the 121 (14.04%) monitored turtles presented debris in their digestive tracts. Litter in faecal pellet of alive individuals (n = 91) and in gastro-intestinal contents of dead ones (n = 30) was categorized, counted and weighed. User plastic was the main category of ingested debris with a frequency of occurrence of 13.22% of the total sample, while sheet (12.39%) and fragments (9.09%) were the most relevant sub-categories. This study highlights for the first time the incidence of litter in alive turtles in Sardinia. This contribution improves the knowledge about marine litter interaction on Caretta caretta as bio-indicator. Results will be useful for the Marine Strategy implementation. Copyright © 2013 Elsevier Ltd. All rights reserved.

Perception of airborne odors by loggerhead sea turtles.

PubMed

Endres, C S; Putman, N F; Lohmann, K J

2009-12-01

Sea turtles are known to detect chemical cues, but in contrast to most marine animals, turtles surface to breathe and thus potentially have access to olfactory cues both in air and in water. To determine whether sea turtles can detect airborne chemical cues, captive loggerhead turtles (Caretta caretta) were placed into a circular, water-filled arena in which odorants could be introduced to the air above the water surface. Air that had passed across the surface of a cup containing food elicited increased activity, diving and other behavior normally associated with feeding. By contrast, air that had passed across the surface of an identical cup containing distilled water elicited no response. Increases in activity during food odor trials occurred only after turtles surfaced to breathe and peaked in the first post-breath minute, implying that the chemical cues eliciting the responses were unlikely to have been detected while the turtles were under water. These results provide the first direct evidence that sea turtles can detect airborne odors. Under natural conditions, this sensory ability might function in foraging, navigation or both.

Baseline heavy metals and metalloid values in blood of loggerhead turtles (Caretta caretta) from Baja California Sur, Mexico.

PubMed

Ley-Quiñónez, C; Zavala-Norzagaray, A A; Espinosa-Carreón, T L; Peckham, H; Marquez-Herrera, C; Campos-Villegas, L; Aguirre, A A

2011-09-01

Environmental pollution due to heavy metals is having an increased impact on marine wildlife accentuated by anthropogenic changes in the planet including overfishing, agricultural runoff and marine emerging infectious diseases. Sea turtles are considered sentinels of ecological health in marine ecosystems. The objective of this study was to determine baseline concentrations of zinc, cadmium, copper, nickel, selenium, manganese, mercury and lead in blood of 22 clinically healthy, loggerhead turtles (Caretta caretta), captured for several reasons in Puerto López Mateos, Baja California Sur, Mexico. Zinc was the most prevalent metal in blood (41.89 μg g⁻¹), followed by Selenium (10.92 μg g⁻¹). The mean concentration of toxic metal Cadmium was 6.12 μg g⁻¹ and 1.01μg g⁻¹ respectively. Mean concentrations of metals followed this pattern: Zn>Se>Ni>Cu>Mn>Cd>Pb and Hg. We can conclude that blood is an excellent tissue to measure in relatively non-invasive way baseline values of heavy metals in Caretta caretta. Copyright © 2011 Elsevier Ltd. All rights reserved.

Plasma levels of pollutants are much higher in loggerhead turtle populations from the Adriatic Sea than in those from open waters (Eastern Atlantic Ocean).

PubMed

Bucchia, Matteo; Camacho, María; Santos, Marcelo R D; Boada, Luis D; Roncada, Paola; Mateo, Rafael; Ortiz-Santaliestra, Manuel E; Rodríguez-Estival, Jaime; Zumbado, Manuel; Orós, Jorge; Henríquez-Hernández, Luis A; García-Álvarez, Natalia; Luzardo, Octavio P

2015-08-01

In this paper we determined the levels of 63 environmental contaminants, including organic (PCBs, organochlorine pesticides, and PAHs) and inorganic (As, Cd, Cu, Pb, Hg and Zn) compounds in the blood of loggerhead turtles (Caretta caretta) from two comparable populations that inhabit distinct geographic areas: the Adriatic Sea (Mediterranean basin) and the Canary Islands (Eastern Atlantic Ocean). All animals were sampled at the end of a period of rehabilitation in centers of wildlife recovery, before being released back into the wild, so they can be considered to be in good health condition. The dual purpose of this paper is to provide reliable data on the current levels of contamination of this species in these geographic areas, and secondly to compare the results of both populations, as it has been reported that marine biota inhabiting the Mediterranean basin is exposed to much higher pollution levels than that which inhabit in other areas of the planet. According to our results it is found that current levels of contamination by organic compounds are considerably higher in Adriatic turtles than in the Atlantic ones (∑PCBs, 28.45 vs. 1.12ng/ml; ∑OCPs, 1.63 vs. 0.19ng/ml; ∑PAHs, 13.39 vs. 4.91ng/ml; p<0.001 in all cases). This is the first time that levels of PAHs are reported in the Adriatic loggerheads. With respect to inorganic contaminants, although the differences were not as great, the Adriatic turtles appear to have higher levels of some of the most toxic elements such as mercury (5.74 vs. 7.59μg/ml, p<0.01). The results of this study confirm that the concentrations are larger in turtles from the Mediterranean, probably related to the high degree of anthropogenic pressure in this basin, and thus they are more likely to suffer adverse effects related to contaminants. Copyright © 2015 Elsevier B.V. All rights reserved.

Is Christian Schooling Really at Loggerheads with the Ideas of Diversity and Tolerance? A Rejoinder

ERIC Educational Resources Information Center

Etherington, Matthew

2008-01-01

This article builds on the foundations and evaluations laid recently by Symes and Gulson in their 2005 article, "Crucifying Education: The rise and rise of new Christian schooling in Australia." It evaluates the warrant of Christian schooling within a liberal democracy and offers a rejoinder for defending the rights of Christian…

Projected response of an endangered marine turtle population to climate change

NASA Astrophysics Data System (ADS)

Saba, Vincent S.; Stock, Charles A.; Spotila, James R.; Paladino, Frank V.; Tomillo, Pilar Santidrián

2012-11-01

Assessing the potential impacts of climate change on individual species and populations is essential for the stewardship of ecosystems and biodiversity. Critically endangered leatherback turtles in the eastern Pacific Ocean are excellent candidates for such an assessment because their sensitivity to contemporary climate variability has been substantially studied. If incidental fisheries mortality is eliminated, this population still faces the challenge of recovery in a rapidly changing climate. Here we combined an Earth system model, climate model projections assessed by the Intergovernmental Panel on Climate Change and a population dynamics model to estimate a 7% per decade decline in the Costa Rica nesting population over the twenty-first century. Whereas changes in ocean conditions had a small effect on the population, the ~2.5°C warming of the nesting beach was the primary driver of the decline through reduced hatching success and hatchling emergence rate. Hatchling sex ratio did not substantially change. Adjusting nesting phenology or changing nesting sites may not entirely prevent the decline, but could offset the decline rate. However, if future observations show a long-term decline in hatching success and emergence rate, anthropogenic climate mitigation of nests (for example, shading, irrigation) may be able to preserve the nesting population.

The world's most isolated and distinct whale population? Humpback whales of the Arabian Sea.

PubMed

Pomilla, Cristina; Amaral, Ana R; Collins, Tim; Minton, Gianna; Findlay, Ken; Leslie, Matthew S; Ponnampalam, Louisa; Baldwin, Robert; Rosenbaum, Howard

2014-01-01

A clear understanding of population structure is essential for assessing conservation status and implementing management strategies. A small, non-migratory population of humpback whales in the Arabian Sea is classified as "Endangered" on the IUCN Red List of Threatened Species, an assessment constrained by a lack of data, including limited understanding of its relationship to other populations. We analysed 11 microsatellite markers and mitochondrial DNA sequences extracted from 67 Arabian Sea humpback whale tissue samples and compared them to equivalent datasets from the Southern Hemisphere and North Pacific. Results show that the Arabian Sea population is highly distinct; estimates of gene flow and divergence times suggest a Southern Indian Ocean origin but indicate that it has been isolated for approximately 70,000 years, remarkable for a species that is typically highly migratory. Genetic diversity values are significantly lower than those obtained for Southern Hemisphere populations and signatures of ancient and recent genetic bottlenecks were identified. Our findings suggest this is the world's most isolated humpback whale population, which, when combined with low population abundance estimates and anthropogenic threats, raises concern for its survival. We recommend an amendment of the status of the population to "Critically Endangered" on the IUCN Red List.

Want change? Call your representative

NASA Astrophysics Data System (ADS)

Fischhoff, Ilya R.

2011-07-01

During my tenure as an AGU Congressional Science Fellow, which began in September 2010 and continues until November 2011, my time has been shared between working with the U.S. House of Representatives Natural Resource Committee Democratic staff and in the office of Rep. Ed Markey (D-Mass., ranking Democrat on the committee). I appreciate getting to work with staff, fellows, and interns who inspire me, make me laugh, and know their issues cold. Much of my work on the committee is related to fish, wildlife, oceans, lands, and water issues and is directly related to my background in ecology and evolutionary biology (I studied zebra ecology and behavior in Kenya). My assignments have included asking the Environmental Protection Agency (EPA) about why it has not changed the allowed usage of certain pesticides that the National Marine Fisheries Service has found to jeopardize the recovery of endangered Pacific salmon; helping to identify research needs and management options to combat the swiftly spreading and catastrophic white nose syndrome in North American bats; and inquiring as to whether a captive-ape welfare bill, if passed without amendment, could thwart development of a vaccine to stop the Ebola virus from continuing to cause mass mortality in endangered wild apes.

Postbreeding dispersal and drift-net mortality of endangered Japanese Murrelets

USGS Publications Warehouse

Piatt, John F.; Gould, Patrick J.

1994-01-01

The incidental catch of seabirds in high-seas drift nets was recorded in 1990-1991 by scientific observers on commercial squid and large-mesh fishery vessels operating in the North Pacific Transitional Zone. Twenty-six Synthliboramphus murrelet deaths were recorded in the months of August through December. All but one were from the Korean squid fishery in a small area bounded by 38°-44°N and 142°-157°E. Five specimens of the dead birds were collected and later identified as Japanese Murrelets (S. wumizusume). As fishing effort was widely distributed over a large area east of Japan, these data suggest that postbreeding Japanese Murrelets migrate north to winter in a relatively small area southeast of Hokkaido, where persistent eddies form at the confluence of the Oyashio and Kuroshio currents. Fronts between cold Oyashio water and Kuroshio warm-core eddies promote the aggregation of zooplankton and pelagic fishes, which in turn may attract murrelets during the nonbreeding season. The estimated total mortality of Japanese Murrelets in high-seas drift-net fisheries represents a significant proportion of the total world population of this rare and endangered species.

Evidence for Bombus occidentalis (Hymenoptera: Apidae) Populations in the Olympic Peninsula, the Palouse Prairie, and Forests of Northern Idaho.

PubMed

Rhoades, Paul R; Koch, Jonathan B; Waits, Lisette P; Strange, James P; Eigenbrode, Sanford D

2016-01-01

Since the mid-1990s, Bombus occidentalis (Green) has declined from being one of the most common to one of the rarest bumble bee species in the Pacific Northwest of the United States. Although its conservation status is unresolved, a petition to list this species as endangered or threatened was recently submitted to the U.S. Fish and Wildlife Service. To shed light on the conservation situation and inform the U.S. Fish and Wildlife Service decision, we report on the detection and abundance of B. occidentalis following bumble bee collection between 2012 and 2014 across the Pacific Northwest. Collection occurred from the San Juan Islands and Olympic peninsula east to northern Idaho and northeastern Oregon, excluding the arid region in central Washington. B. occidentalis was observed at 23 collection sites out of a total of 234. With the exception of three sites on the Olympic peninsula, all of these were in the southeastern portion of the collection range. © The Author 2016. Published by Oxford University Press on behalf of the Entomological Society of America.

Stable isotopes in barnacles as a tool to understand green sea turtle (Chelonia mydas) regional movement patterns

NASA Astrophysics Data System (ADS)

Detjen, M.; Sterling, E.; Gómez, A.

2015-12-01

Sea turtles are migratory animals that travel long distances between their feeding and breeding grounds. Traditional methods for researching sea turtle migratory behavior have important disadvantages, and the development of alternatives would enhance our ability to monitor and manage these globally endangered species. Here we report on the isotope signatures in green sea-turtle (Chelonia mydas) barnacles (Platylepas sp.) and discuss their potential relevance as tools with which to study green sea turtle migration and habitat use patterns. We analyzed oxygen (δ18O) and carbon (δ13C) isotope ratios in barnacle calcite layers from specimens collected from green turtles captured at the Palmyra Atoll National Wildlife Refuge (PANWR) in the central Pacific. Carbon isotopes were not informative in this study. However, the oxygen isotope results suggest likely regional movement patterns when mapped onto a predictive oxygen isotope map of the Pacific. Barnacle proxies could therefore complement other methods in understanding regional movement patterns, informing more effective conservation policy that takes into account connectivity between populations.

Stable isotopes in barnacles as a tool to understand green sea turtle (Chelonia mydas) regional movement patterns

NASA Astrophysics Data System (ADS)

Detjen, M.; Sterling, E.; Gómez, A.

2015-03-01

Sea turtles are migratory animals that travel long distances between their feeding and breeding grounds. Traditional methods for researching sea turtle migratory behavior have important disadvantages, and the development of alternatives would enhance our ability to monitor and manage these globally endangered species. Here we report on the isotope signatures in green sea turtle (Chelonia mydas) barnacles (Platylepas sp.) and discuss their potential relevance as tools with which to study green sea turtle migration and habitat use patterns. We analyzed oxygen (δ18O) and carbon (δ13C) isotope ratios in barnacle calcite layers from specimens collected from green turtles captured at the Palmyra Atoll National Wildlife Refuge (PANWR) in the Central Pacific. Carbon isotopes were not informative in this study. However, the oxygen isotope results suggest likely regional movement patterns when mapped onto a predictive oxygen isotope map of the Pacific. Barnacle proxies could therefore complement other methods in understanding regional movement patterns, informing more effective conservation policy that takes into account connectivity between populations.

Spatial and temporal heterogeneity of infectious hematopoietic necrosis virus in Pacific Northwest salmonids

USGS Publications Warehouse

Breyta, Rachel; Black, Allison; Kaufman, John; Kurath, Gael

2016-01-01

The aquatic rhaboviral pathogen infectious hematopoietic necrosis virus (IHNV) causes acute disease in juvenile fish of a number of populations of Pacific salmonid species. Heavily managed in both marine and freshwater environments, these fish species are cultured during the juvenile stage in freshwater conservation hatcheries, where IHNV is one of the top three infectious diseases that cause serious morbidity and mortality. Therefore, a comprehensive study of viral genetic surveillance data representing 2590 field isolates collected between 1958 and 2014 was conducted to determine the spatial and temporal patterns of IHNV in the Pacific Northwest of the contiguous United States. Prevalence of infection varied over time, fluctuating over a rough 5–7 year cycle. The genetic analysis revealed numerous subgroups of IHNV, each of which exhibited spatial heterogeneity. Within all subgroups, dominant genetic types were apparent, though the temporal patterns of emergence of these types varied among subgroups. Finally, the affinity or fidelity of subgroups to specific host species also varied, where UC subgroup viruses exhibited a more generalist profile and all other subgroups exhibited a specialist profile. These complex patterns are likely synergistically driven by numerous ecological, pathobiological, and anthropogenic factors. Since only a few anthropogenic factors are candidates for managed intervention aimed at improving the health of threatened or endangered salmonid fish populations, determining the relative impact of these factors is a high priority for future studies.

Circulation in the Ecologically Protected Lau Basin

NASA Astrophysics Data System (ADS)

Simons, E.; Speer, K. G.; Weijer, W.

2016-12-01

The Lau Basin, located in the South Pacific, north of New Zealand and East of Fiji, is a back-arc basin with active hydrothermal vents and volcanoes. In September 2015, the New Zealand Ministry for the Environment announced the new Kermadec Ocean Sanctuary in the southern portion of the basin. The sanctuary, which covers more than 620,000 square kilometers, is the world's largest protected marine environment boasting endangered species from turtles, whales, and seabirds to corals, shellfish, and zooplankton. Though protections are in place for the ecological residents of the basin, little is known about the fluid circulation that permits such ecological diversity. Whitworth et al. (1999), explored the water-masses associated with the deep western boundary current (DWBC) in the Tonga-Kermadec Trench and found the trench to be a passageway for Circumpolar Deep Water (CDW) into the South Pacific. In this project, an analysis of Ridge 2000 Program floats and Argo floats show intrusion of water from the trench into the basin, potentially providing another pathway of CDW into the western edge of the South Pacific. Using a simple model developed by Stommel-Arons (1960) and expanded upon by Pedlosky (1989) for abyssal circulation, the bulk of the flow pattern observed from the floats is qualitatively described, including the well-defined DWBC, first observed in this data, along the Lau-Fiji ridge.

Movements and diving behavior of internesting green turtles along Pacific Costa Rica.

PubMed

Blanco, Gabriela S; Morreale, Stephen J; Seminoff, Jeffrey A; Paladino, Frank V; Piedra, Rotney; Spotila, James R

2013-09-01

Using satellite transmitters, we determined the internesting movements, spatial ecology and diving behavior of East Pacific green turtles (Chelonia mydas) nesting on Nombre de Jesús and Zapotillal beaches along the Pacific coast of northwestern Costa Rica. Kernel density analysis indicated that turtles spent most of their time in a particularly small area in the vicinity of the nesting beaches (50% utilization distribution was an area of 3 km(2) ). Minimum daily distance traveled during a 12 day internesting period was 4.6 ± 3.5 km. Dives were short and primarily occupied the upper 10 m of the water column. Turtles spent most of their time resting at the surface and conducting U-dives (ranging from 60 to 81% of the total tracking time involved in those activities). Turtles showed a strong diel pattern, U-dives mainly took place during the day and turtles spent a large amount of time resting at the surface at night. The lack of long-distance movements demonstrated that this area was heavily utilized by turtles during the nesting season and, therefore, was a crucial location for conservation of this highly endangered green turtle population. The unique behavior of these turtles in resting at the surface at night might make them particularly vulnerable to fishing activities near the nesting beaches. © 2012 Wiley Publishing Asia Pty Ltd, ISZS and IOZ/CAS.

MX Siting Investigation. DTN/OBTS Field Surveys. Volume III. Biological Resources Nevada and Utah.

DTIC Science & Technology

1981-11-30

Black - throated sparrow (Amphispiza bilineata) X X X REPTILES Desert tortoise (Gopherus agassizi) X X Zebra-tailed...observed on the greatest number of sites was the black - throated sparrow (Amphispiza bilineata). The reptile most frequently observed was the side-blotched...Poliopt~ila caerula Loggerhead shrike Lanius ludovicianus Black - throated sparrow Amphispiza bilineata Unidentified sparrow Unidentified buteo REPTILES

Dynamic resource allocation in conservation planning

USGS Publications Warehouse

Golovin, D.; Krause, A.; Gardner, B.; Converse, S.J.; Morey, S.

2011-01-01

Consider the problem of protecting endangered species by selecting patches of land to be used for conservation purposes. Typically, the availability of patches changes over time, and recommendations must be made dynamically. This is a challenging prototypical example of a sequential optimization problem under uncertainty in computational sustainability. Existing techniques do not scale to problems of realistic size. In this paper, we develop an efficient algorithm for adaptively making recommendations for dynamic conservation planning, and prove that it obtains near-optimal performance. We further evaluate our approach on a detailed reserve design case study of conservation planning for three rare species in the Pacific Northwest of the United States. Copyright ?? 2011, Association for the Advancement of Artificial Intelligence. All rights reserved.

Endangered species: where leatherback turtles meet fisheries.

PubMed

Ferraroli, Sandra; Georges, Jean-Yves; Gaspar, Philippe; Le Maho, Yvon

2004-06-03

The dramatic worldwide decline in populations of the leatherback turtle (Dermochelys coriacea) is largely due to the high mortality associated with their interaction with fisheries, so a reduction of this overlap is critical to their survival. The discovery of narrow migration corridors used by the leatherbacks in the Pacific Ocean raised the possibility of protecting the turtles by restricting fishing in these key areas. Here we use satellite tracking to show that there is no equivalent of these corridors in the North Atlantic Ocean, because the turtles disperse actively over the whole area. But we are able to identify a few 'hot spots' where leatherbacks meet fisheries and where conservation efforts should be focused.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Sather, Nichole K.; Johnson, Gary E.; Storch, Adam

The tidal freshwater monitoring (TFM) project reported herein is part of the research, monitoring, and evaluation effort developed by the Action Agencies (Bonneville Power Administration, the U.S. Army Corps of Engineers [USACE], and the U.S. Bureau of Reclamation) in response to obligations arising from the Endangered Species Act (ESA) as a result of operation of the Federal Columbia River Power System. The project is being performed under the auspices of the Northwest Power and Conservation Council’s Columbia Basin Fish and Wildlife Program (Project No. 2005-001-00). The research is a collaborative effort among the Pacific Northwest National Laboratory, the Oregon Departmentmore » of Fish and Wildlife, the National Marine Fisheries Service, and the University of Washington.« less

Asynchronous emergence by loggerhead turtle (Caretta caretta) hatchlings.

PubMed

Houghton, J D; Hays, G C

2001-03-01

For many decades it has been accepted that marine turtle hatchlings from the same nest generally emerge from the sand together. However, for loggerhead turtles (Caretta caretta) nesting on the Greek Island of Kefalonia, a more asynchronous pattern of emergence has been documented. By placing temperature loggers at the top and bottom of nests laid on Kefalonia during 1998, we examined whether this asynchronous emergence was related to the thermal conditions within nests. Pronounced thermal variation existed not only between, but also within, individual nests. These within-nest temperature differences were related to the patterns of hatchling emergence, with hatchlings from nests displaying large thermal ranges emerging over a longer time-scale than those characterised by more uniform temperatures. In many egg-laying animals, parental care of the offspring may continue while the eggs are incubating and also after they have hatched. Consequently, the importance of the nest site for determining incubation conditions may be reduced since the parents themselves may alter the local environment. By contrast, in marine turtles, parental care ceases once the eggs have been laid and the nest site covered. The positioning of the nest site, in both space and time, may therefore have profound effects for marine turtles by affecting, for example, the survival of the eggs and hatchlings as well as their sex (Janzen and Paukstis 1991). During incubation, sea turtle embryos grow from a few cells at oviposition to a self-sufficient organism at hatching some 50-80 days later (Ackerman 1997). After hatching, the young turtles dig up through the sand and emerge typically en masse at the surface 1-7 nights later, with a number of stragglers following over the next few nights (Christens 1990). This contrasts with the frequently observed pattern of hatching asynchrony in birds. It has been suggested that the cause of mass emergence in turtles is that eggs within a clutch are fertilised within a short period of time and then, when thermal conditions within the nest are uniform, develop at very similar rates and hence hatch and emerge together (Porter 1972). As a corollary of this idea, it would be predicted that when there are pronounced within-nest thermal gradients, development rates of siblings will be different and hence asynchronous hatching and emergence might occur. While it may be energetically beneficial for hatchlings to emerge in a group (Carr and Hirth 1961), if the extent of hatching asynchrony is marked then there may be severe costs for individuals if they wait for all their siblings to hatch before attempting to dig out of the sand (Hays and Speakman 1992). Under such conditions, the protracted emergence of small groups of hatchlings over several nights may be favoured. Examination of the literature suggests that emergence asynchrony may be more widespread than generally considered. For example, Witherington et al. (1990) described loggerhead turtle hatchlings (Caretta caretta) emerging over 4 days in Florida; for green turtles (Chelonia mydas), Hendrickson (1958) documented that nests in Malaysia and Sarawak produced hatchlings for up to 8 days; whilst Diamond (1976) found that hawksbill (Eretmochelys imbricata) nests on Cousin Island, Seychelles, were active for up to 4 days. Similarly, on the Greek Island of Kefalonia, we have shown that emergence from individual loggerhead turtle nests may occur on up to 11 nights (Hays and Speakman 1992). It is logical to suppose that asynchronous emergence relates to thermal gradients within nests, since the incubation duration of sea turtle eggs is related to temperature, with eggs hatching quicker when the temperature is higher. Here we test this hypothesis by measuring thermal variations within loggerhead turtle nests and comparing these variations to the patterns of hatchling emergence.

The developmental biogeography of hawksbill sea turtles in the North Pacific.

PubMed

Van Houtan, Kyle S; Francke, Devon L; Alessi, Sarah; Jones, T Todd; Martin, Summer L; Kurpita, Lauren; King, Cheryl S; Baird, Robin W

2016-04-01

High seas oceanic ecosystems are considered important habitat for juvenile sea turtles, yet much remains cryptic about this important life-history period. Recent progress on climate and fishery impacts in these so-called lost years is promising, but the developmental biogeography of hawksbill sea turtles (Eretmochelys imbricata) has not been widely described in the Pacific Ocean. This knowledge gap limits the effectiveness of conservation management for this globally endangered species. We address this with 30 years of stranding observations, 20 years of bycatch records, and recent simulations of natal dispersal trajectories in the Hawaiian Archipelago. We synthesize the analyses of these data in the context of direct empirical observations, anecdotal sightings, and historical commercial harvests from the insular Pacific. We find hawksbills 0-4 years of age, measuring 8-34 cm straight carapace length, are found predominantly in the coastal pelagic waters of Hawaii. Unlike other species, we find no direct evidence of a prolonged presence in oceanic habitats, yet satellite tracks of passive drifters (simulating natal dispersal) and our small sample sizes suggest that an oceanic phase for hawksbills cannot be dismissed. Importantly, despite over 600 million hooks deployed and nearly 6000 turtle interactions, longline fisheries have never recorded a single hawksbill take. We address whether the patterns we observe are due to population size and gear selectivity. Although most sea turtle species demonstrate clear patterns of oceanic development, hawksbills in the North Pacific may by contrast occupy a variety of ecosystems including coastal pelagic waters and shallow reefs in remote atolls. This focuses attention on hazards in these ecosystems - entanglement and ingestion of marine debris - and perhaps away from longline bycatch and decadal climate regimes that affect sea turtle development in oceanic regions.

Gibbons (Nomascus gabriellae) provide key seed dispersal for the Pacific walnut (Dracontomelon dao), in Asia's lowland tropical forest

NASA Astrophysics Data System (ADS)

Hai, Bach Thanh; Chen, Jin; McConkey, Kim R.; Dayananda, Salindra K.

2018-04-01

Understanding the mutualisms between frugivores and plants is essential for developing successful forest management and conservation strategies, especially in tropical rainforests where the majority of plants are dispersed by animals. Gibbons are among the most effective seed dispersers in South East Asia's tropical forests, but are also one of the highly threatened arboreal mammals in the region. Here we studied the seed dispersal of the Pacific walnut (Dracontomelon dao), a canopy tree which produces fruit that are common in the diet of the endangered southern yellow-cheeked crested gibbon (Nomascus gabriellae). We found that gibbons were the most effective disperser for this species; they consumed approximately 45% of the fruit crop, which was four times more than that consumed by macaques - the only other legitimate disperser. Gibbons tracked the temporal (but not spatial) abundance of ripe fruits, indicating this fruit was a preferred species for the gibbon. Both gibbons and macaques dispersed the majority (>90%) of the seeds at least 20 m away from parent crowns, with mean dispersal distances by gibbons measuring 179.3 ± 98.0 m (range: 4-425 m). Seeds defecated by gibbons germinated quicker and at greater rates than seeds spat by macaques, or in undispersed fruits. Gibbon-dispersed seeds were also more likely to be removed by unknown seed predators or unknown secondary dispersers. Overall, gibbons play a key role in the regeneration of the Pacific walnut. Our findings have significant implications both for the management of the Pacific walnut tree dominating tropical rainforest as well as the reintroduction program of the Southern yellow-cheeked crested gibbon.

Non-native molluscan colonizers on deliberately placed shipwrecks in the Florida Keys, with description of a new species of potentially invasive worm-snail (Gastropoda: Vermetidae).

PubMed

Bieler, Rüdiger; Granados-Cifuentes, Camila; Rawlings, Timothy A; Sierwald, Petra; Collins, Timothy M

2017-01-01

Artificial reefs created by deliberately sinking ships off the coast of the Florida Keys island chain are providing new habitat for marine invertebrates. This newly developing fouling community includes the previously reported invasive orange tube coral Tubastraea coccinea and the non-native giant foam oyster Hyotissa hyotis . New SCUBA-based surveys involving five shipwrecks spanning the upper, middle, and lower Florida Keys, show T. coccinea now also established in the lower Keys and H. hyotis likewise extending to new sites. Two additional mollusks found on the artificial reefs, the amathinid gastropod Cyclothyca pacei and gryphaeid oyster Hyotissa mcgintyi , the latter also common in the natural reef areas, are discussed as potentially non-native. A new species of sessile, suspension-feeding, worm-snail, Thylacodes vandyensi s Bieler, Rawlings & Collins n. sp. (Vermetidae), is described from the wreck of the USNS Vandenberg off Key West and discussed as potentially invasive. This new species is compared morphologically and by DNA barcode markers to other known members of the genus, and may be a recent arrival from the Pacific Ocean. Thylacodes vandyensis is polychromatic, with individuals varying in both overall head-foot coloration and mantle margin color pattern. Females brood stalked egg capsules attached to their shell within the confines of their mantle cavity, and give rise to crawl-away juveniles. Such direct-developing species have the demonstrated capacity for colonizing habitats isolated far from their native ranges and establishing rapidly growing founder populations. Vermetid gastropods are common components of the marine fouling community in warm temperate and tropical waters and, as such, have been tagged as potentially invasive or with a high potential to be invasive in the Pacific Ocean. As vermetids can influence coral growth/composition in the Pacific and have been reported serving as intermediate hosts for blood flukes of loggerhead turtles, such new arrivals in the Florida Keys National Marine Sanctuary are of concern. Growing evidence indicates that artificial reefs can act as permanent way-stations for arriving non-natives, providing nurseries within which populations may grow in an environment with reduced competition compared to native habitats. Consequently, artificial reefs can act as sentinels for the appearance of new species. Ongoing monitoring of the developing molluscan fauna on the artificial reefs of the Florida Keys is necessary to recognize new invasions and identify potential eradication targets, thereby assuring the health of the nearby natural barrier reef.

Non-native molluscan colonizers on deliberately placed shipwrecks in the Florida Keys, with description of a new species of potentially invasive worm-snail (Gastropoda: Vermetidae)

PubMed Central

Granados-Cifuentes, Camila; Rawlings, Timothy A.; Sierwald, Petra; Collins, Timothy M.

2017-01-01

Artificial reefs created by deliberately sinking ships off the coast of the Florida Keys island chain are providing new habitat for marine invertebrates. This newly developing fouling community includes the previously reported invasive orange tube coral Tubastraea coccinea and the non-native giant foam oyster Hyotissa hyotis. New SCUBA-based surveys involving five shipwrecks spanning the upper, middle, and lower Florida Keys, show T. coccinea now also established in the lower Keys and H. hyotis likewise extending to new sites. Two additional mollusks found on the artificial reefs, the amathinid gastropod Cyclothyca pacei and gryphaeid oyster Hyotissa mcgintyi, the latter also common in the natural reef areas, are discussed as potentially non-native. A new species of sessile, suspension-feeding, worm-snail, Thylacodes vandyensis Bieler, Rawlings & Collins n. sp. (Vermetidae), is described from the wreck of the USNS Vandenberg off Key West and discussed as potentially invasive. This new species is compared morphologically and by DNA barcode markers to other known members of the genus, and may be a recent arrival from the Pacific Ocean. Thylacodes vandyensis is polychromatic, with individuals varying in both overall head-foot coloration and mantle margin color pattern. Females brood stalked egg capsules attached to their shell within the confines of their mantle cavity, and give rise to crawl-away juveniles. Such direct-developing species have the demonstrated capacity for colonizing habitats isolated far from their native ranges and establishing rapidly growing founder populations. Vermetid gastropods are common components of the marine fouling community in warm temperate and tropical waters and, as such, have been tagged as potentially invasive or with a high potential to be invasive in the Pacific Ocean. As vermetids can influence coral growth/composition in the Pacific and have been reported serving as intermediate hosts for blood flukes of loggerhead turtles, such new arrivals in the Florida Keys National Marine Sanctuary are of concern. Growing evidence indicates that artificial reefs can act as permanent way-stations for arriving non-natives, providing nurseries within which populations may grow in an environment with reduced competition compared to native habitats. Consequently, artificial reefs can act as sentinels for the appearance of new species. Ongoing monitoring of the developing molluscan fauna on the artificial reefs of the Florida Keys is necessary to recognize new invasions and identify potential eradication targets, thereby assuring the health of the nearby natural barrier reef. PMID:28392984

Wind, waves, and wing loading: Morphological specialization may limit range expansion of endangered albatrosses

USGS Publications Warehouse

Suryan, R.M.; Anderson, D.J.; Shaffer, S.A.; Roby, D.D.; Tremblay, Y.; Costa, D.P.; Sievert, P.R.; Sato, F.; Ozaki, K.; Balogh, G.R.; Nakamura, N.

2008-01-01

Among the varied adaptations for avian flight, the morphological traits allowing large-bodied albatrosses to capitalize on wind and wave energy for efficient long-distance flight are unparalleled. Consequently, the biogeographic distribution of most albatrosses is limited to the windiest oceanic regions on earth; however, exceptions exist. Species breeding in the North and Central Pacific Ocean (Phoebastria spp.) inhabit regions of lower wind speed and wave height than southern hemisphere genera, and have large intrageneric variation in body size and aerodynamic performance. Here, we test the hypothesis that regional wind and wave regimes explain observed differences in Phoebastria albatross morphology and we compare their aerodynamic performance to representatives from the other three genera of this globally distributed avian family. In the North and Central Pacific, two species (short-tailed P. albatrus and waved P. irrorata) are markedly larger, yet have the smallest breeding ranges near highly productive coastal upwelling systems. Short-tailed albatrosses, however, have 60% higher wing loading (weight per area of lift) compared to waved albatrosses. Indeed, calculated aerodynamic performance of waved albatrosses, the only tropical albatross species, is more similar to those of their smaller congeners (black-footed P. nigripes and Laysan P. immutabilis), which have relatively low wing loading and much larger foraging ranges that include central oceanic gyres of relatively low productivity. Globally, the aerodynamic performance of short-tailed and waved albatrosses are most anomalous for their body sizes, yet consistent with wind regimes within their breeding season foraging ranges. Our results are the first to integrate global wind and wave patterns with albatross aerodynamics, thereby identifying morphological specialization that may explain limited breeding ranges of two endangered albatross species. These results are further relevant to understanding past and potentially predicting future distributional limits of albatrosses globally, particularly with respect to climate change effects on basin-scale and regional wind fields.

A Modeled Comparison of Direct and Food Web-Mediated Impacts of Common Pesticides on Pacific Salmon

PubMed Central

Macneale, Kate H.; Spromberg, Julann A.; Baldwin, David H.; Scholz, Nathaniel L.

2014-01-01

In the western United States, pesticides used in agricultural and urban areas are often detected in streams and rivers that support threatened and endangered Pacific salmon. Although concentrations are rarely high enough to cause direct salmon mortality, they can reach levels sufficient to impair juvenile feeding behavior and limit macroinvertebrate prey abundance. This raises the possibility of direct adverse effects on juvenile salmon health in tandem with indirect effects on salmon growth as a consequence of reduced prey abundance. We modeled the growth of ocean-type Chinook salmon (Oncorhynchus tshawytscha) at the individual and population scales, investigating insecticides that differ in how long they impair salmon feeding behavior and in how toxic they are to salmon compared to macroinvertebrates. The relative importance of these direct vs. indirect effects depends both on how quickly salmon can recover and on the relative toxicity of an insecticide to salmon and their prey. Model simulations indicate that when exposed to a long-acting organophosphate insecticide that is highly toxic to salmon and invertebrates (e.g., chlorpyrifos), the long-lasting effect on salmon feeding behavior drives the reduction in salmon population growth with reductions in prey abundance having little additional impact. When exposed to short-acting carbamate insecticides at concentrations that salmon recover from quickly but are lethal to invertebrates (e.g., carbaryl), the impacts on salmon populations are due primarily to reductions in their prey. For pesticides like carbaryl, prey sensitivity and how quickly the prey community can recover are particularly important in determining the magnitude of impact on their predators. In considering both indirect and direct effects, we develop a better understanding of potential impacts of a chemical stressor on an endangered species and identify data gaps (e.g., prey recovery rates) that contribute uncertainty to these assessments. PMID:24686837

Cardiovascular flukes (Trematoda: Spirorchiidae) in Caretta caretta Linnaeus, 1758 from the Mediterranean Sea.

PubMed

Marchiori, Erica; Negrisolo, Enrico; Cassini, Rudi; Garofalo, Luisa; Poppi, Lisa; Tessarin, Cinzia; Marcer, Federica

2017-10-10

The northern Adriatic Sea represents one of the most important neritic foraging grounds for the loggerhead sea turtle Caretta caretta L. in the Mediterranean Sea. Four genera of blood flukes with variable prevalence and pathogenic impact have been reported worldwide in this species. Hapalotrema Looss, 1899 and Amphiorchis Price, 1934 are the only two genera reported in Mediterranean waters; however, updated data describing spirorchiidiasis in the central and eastern Mediterranean and infection prevalence are still lacking. This work aimed to investigate the presence and pathology of spirorchiidiasis in C. caretta in the Mediterranean Sea. One hundred sixty-eight animals stranded along the northwestern Adriatic coast between 2009 and 2015 were submitted to necropsy and subsequent analyses for the detection of adult flukes, detection of eggs in the faeces and spleen and histopathology. Molecular analyses were carried out on hosts (mitochondrial D-loop) and parasites (28S gene and ITS2 spacer) to trace the turtle origins and identify the fluke phylogenetic relationships. Spirorchiidiasis was detected in 16.7% of the animals. Hapalotrema mistroides (Monticelli, 1899) and Neospirorchis sp. were found in twenty-six and ten cases, respectively. Adult flukes were found in six cases, while eggs were detectable through copromicroscopic examination for all infected turtles, and the results for the detection of eggs in the spleen agreed with the copromicroscopic analysis. Only mild lesions were observed. Eggs of types 1 and 3 were grossly visible in the gastrointestinal mucosa, vasculitis was rarely observed in the heart and great vessels, and multifocal granulomas were widespread in the tissues. Molecular identification unambiguously assigned the spirorchiid samples to H. mistroides and Neospirorchis sp. Genetic characterization of loggerhead mtDNA pointed to a Mediterranean origin of the turtle hosts. This survey provides new data on the spread of spirorchiidiasis in the Mediterranean loggerhead sea turtle population and reports for the first time the presence of Neospirorchis spp. in this basin. The infections did not have a causal effect on the death nor a strong impact on the general health status of the animals.

Population growth is limited by nutritional impacts on pregnancy success in endangered Southern Resident killer whales (Orcinus orca).

PubMed

Wasser, Samuel K; Lundin, Jessica I; Ayres, Katherine; Seely, Elizabeth; Giles, Deborah; Balcomb, Kenneth; Hempelmann, Jennifer; Parsons, Kim; Booth, Rebecca

2017-01-01

The Southern Resident killer whale population (Orcinus orca) was listed as endangered in 2005 and shows little sign of recovery. These fish eating whales feed primarily on endangered Chinook salmon. Population growth is constrained by low offspring production for the number of reproductive females in the population. Lack of prey, increased toxins and vessel disturbance have been listed as potential causes of the whale's decline, but partitioning these pressures has been difficult. We validated and applied temporal measures of progesterone and testosterone metabolites to assess occurrence, stage and health of pregnancy from genotyped killer whale feces collected using detection dogs. Thyroid and glucocorticoid hormone metabolites were measured from these same samples to assess physiological stress. These methods enabled us to assess pregnancy occurrence and failure as well as how pregnancy success was temporally impacted by nutritional and other stressors, between 2008 and 2014. Up to 69% of all detectable pregnancies were unsuccessful; of these, up to 33% failed relatively late in gestation or immediately post-partum, when the cost is especially high. Low availability of Chinook salmon appears to be an important stressor among these fish-eating whales as well as a significant cause of late pregnancy failure, including unobserved perinatal loss. However, release of lipophilic toxicants during fat metabolism in the nutritionally deprived animals may also provide a contributor to these cumulative effects. Results point to the importance of promoting Chinook salmon recovery to enhance population growth of Southern Resident killer whales. The physiological measures used in this study can also be used to monitor the success of actions aimed at promoting adaptive management of this important apex predator to the Pacific Northwest.

Population growth is limited by nutritional impacts on pregnancy success in endangered Southern Resident killer whales (Orcinus orca)

PubMed Central

Wasser, Samuel K.; Lundin, Jessica I.; Ayres, Katherine; Seely, Elizabeth; Giles, Deborah; Balcomb, Kenneth; Hempelmann, Jennifer; Parsons, Kim; Booth, Rebecca

2017-01-01

The Southern Resident killer whale population (Orcinus orca) was listed as endangered in 2005 and shows little sign of recovery. These fish eating whales feed primarily on endangered Chinook salmon. Population growth is constrained by low offspring production for the number of reproductive females in the population. Lack of prey, increased toxins and vessel disturbance have been listed as potential causes of the whale’s decline, but partitioning these pressures has been difficult. We validated and applied temporal measures of progesterone and testosterone metabolites to assess occurrence, stage and health of pregnancy from genotyped killer whale feces collected using detection dogs. Thyroid and glucocorticoid hormone metabolites were measured from these same samples to assess physiological stress. These methods enabled us to assess pregnancy occurrence and failure as well as how pregnancy success was temporally impacted by nutritional and other stressors, between 2008 and 2014. Up to 69% of all detectable pregnancies were unsuccessful; of these, up to 33% failed relatively late in gestation or immediately post-partum, when the cost is especially high. Low availability of Chinook salmon appears to be an important stressor among these fish-eating whales as well as a significant cause of late pregnancy failure, including unobserved perinatal loss. However, release of lipophilic toxicants during fat metabolism in the nutritionally deprived animals may also provide a contributor to these cumulative effects. Results point to the importance of promoting Chinook salmon recovery to enhance population growth of Southern Resident killer whales. The physiological measures used in this study can also be used to monitor the success of actions aimed at promoting adaptive management of this important apex predator to the Pacific Northwest. PMID:28662095

The impact of temperature stress and pesticide exposure on mortality and disease susceptibility of endangered Pacific salmon.

PubMed

Dietrich, Joseph P; Van Gaest, Ahna L; Strickland, Stacy A; Arkoosh, Mary R

2014-08-01

Anthropogenic stressors, including chemical contamination and temperature stress, may contribute to increased disease susceptibility in aquatic animals. Specifically, the organophosphate pesticide malathion has been detected in surface waters inhabited by threatened and endangered salmon. In the presence of increasing water temperatures, malathion may increase susceptibility to disease and ultimately threaten salmon survival. This work examines the effect of acute and sublethal exposures to malathion on ocean-type subyearling Chinook salmon held under two temperature regimes. Chinook salmon were exposed to malathion at optimal (11 °C) or elevated (19 and 20 °C) temperatures. The influence of temperature on the acute toxicity of malathion was determined by generating 96-h lethal concentration (LC) curves. A disease challenge assay was also used to assess the effects of sublethal malathion exposure. The malathion concentration that resulted in 50% mortality (LC50; 274.1 μg L(-1)) of the Chinook salmon at 19 °C was significantly less than the LC50 at 11 °C (364.2 μg L(-1)). Mortality increased 11.2% in Chinook salmon exposed to malathion at the elevated temperature and challenged with Aeromonas salmonicida compared to fish held at the optimal temperature and exposed to malathion or the carrier control. No difference in disease challenge mortality was observed among malathion-exposed and unexposed fish at the optimal temperature. The interaction of co-occurring stressors may have a greater impact on salmon than if they occur in isolation. Ecological risk assessments considering the effects of an individual stressor on threatened and endangered salmon may underestimate risk when additional stressors are present in the environment. Published by Elsevier Ltd.

Recent status and trends of the land bird avifauna on Saipan, Mariana Islands, with emphasis on the endangered Nightingale Reed-warbler Acrocephalus luscinia

USGS Publications Warehouse

Camp, R.J.; Pratt, T.K.; Marshall, A.P.; Amidon, F.; Williams, L.L.

2009-01-01

The avifauna of the Mariana Islands, an archipelago in the western Pacific, faces the threats of rapid economic development and the spread of non-native species, particularly a devastating predator, Brown Tree Snake Boiga irregularis. In this paper, we examine the status and trends of the land bird fauna of Saipan Island based on three island-wide surveys conducted in 1982, 1997, and 2007. During this period, the human population on Saipan increased more than four-fold and much of the island has been developed. The surveys employed standard point-transect methods based on Distance Sampling. Remarkably, we found nearly all species of land birds - 11 native species and three introduced species - to be common or abundant. The exception was the Micronesian Megapode Megapodius laperouse, a historically rare species that was not observed on the 2007 survey, although it does persist on Saipan and other Mariana islands. A comparison of species densities among the three surveys showed that seven species, mainly fruit and seed-eaters, had increased and three species of insectivorous birds had decreased - Rufous Fantail Rhipidura rufifrons, Nightingale Reed-warbler Acrocephalus luscinia, and Golden White-eye Cleptornis marchei. Of these three, Nightingale Reed-warbler is listed as Endangered on the IUCN Red List and as an Endangered Species by the U.S. Fish and Wildlife Service. Reed-warbler densities on Saipan decreased by more than half between 1982 and 2007. Although point transect sampling worked well for this species, density estimates and trends assessment could be improved by reallocating sampling stations among habitats and by more frequent sampling. ?? BirdLife International 2009.

Contaminants in eggs of western snowy plovers and California least terns: is there a link to population decline?

USGS Publications Warehouse

Hothern, R.L.; Powell, A.N.

2000-01-01

Environmental contaminants may have adverse effects on avian reproduction and may be contributing to declines of avian species nesting along the southern California Coast. Examples of impaired reproduction caused by organochlorine pesticides, PCBs, and elements such as mercury (Hg) and selenium (Se) include delayed ovulation, reduced egg production, defective eggshells, decreased hatchability, embryotoxicosis, aberrant incubation behavior, and mortality of chicks and adults (Heinz 1976; Blus 1982; Ohlendorf et al. 1986).The federal government listed the California least tern (Sterna antillarum browni) as endangered in 1970 (U.S. Fish and Wildlife Service 1985). The Pacific Coast population of western snowy plover (Charadrius alexandrinus nivosus) was listed as threatened by the federal government in 1993 (Federal Register 1993). Habitat loss and human-related disturbance have been identified as primary causes of the decline of both the primarily insectivorous plover (Powell 1998) and the primarily piscivorous tern, but local food shortages have also limited the terns.Both species breed along the highly urbanized coastline of southern California. A portion of the snowy plover population is present on the breeding grounds yearround, while the remainder winters along the Pacific Coast south into Baja California, Mexico (Stenzel et al. 1994). Least terns winter primarily along the Pacific Coast of Central America (Massey et al. 1992). This study was designed to evaluate the effects that contaminants acquired on the breeding or wintering grounds might be having on reproduction by snowy plovers and least terns.

The brown tree snake, an introduced pest species in the central Pacific Islands

USGS Publications Warehouse

Fritts, Thomas H.; Rodda, Gordon H.

1989-01-01

The reproduction of endangered Mariana crows (Corvus kubaryi) is intensively monitored, nests are protected, and (when necessary) eggs or young are moved to the safety of lab conditions until they are less vulnerable to the threats in natural habitats. Barriers on tree trunks and judicious pruning of adjacent trees are used in attempts to exclude snakes from nest trees. Two birds unique to Guam--the Micronesian kingfisher (Halcyon cinnamomina cinnamomina) and Guam rail (Gallirallus owstoni)-- are maintained at captive propagation facilities on Guam and in mainland zoos. Studies of these and other species, in captivity and on nearby islands, are underway to bolster our biological understanding of their behavior, reproduction, habitat use, and population biology.

The Biophysical Characteristics Of Hatching Habitat Of Lekang Turtle (Lepidhochelys olivacea) Eggs In Turtle Conservation And Education Center, Bali

NASA Astrophysics Data System (ADS)

Suryono; Ario, R.; Wibowo, E.; Handoyo, G.

2018-02-01

Lekang turtle (Lepidhochelys olivacea) is one of the fauna that is protected as an endangered population. This marine reptile was able to migrate in great distance along the Indian Ocean, the Pacific Ocean, and South East Asia. Its existence has long been threatened, either by nature or human activities that endangered the population directly or indirectly. The decreasing number of sea turtle population that nest in Bali area is one indication of the reducing number of Lekang turtle in Indonesia. If left unchecked, it will result in the loss of Lekang turtle. This study aims to determine the successful percentage of conservation techniques and Lekang turtle hatching eggs (olive ridley sea turtle) in TCEC, Bali. The method used in this research is the method of observation or direct observation done in the field. Data collection is done by direct observation in the field. The results showed that the turtle breeding site is located in an area that is less strategic because too far from the sea, so that the temperature and humidity cannot be stable. Water content is most an important factor in the growth of embryo and egg hatching. This will lead to the decrease of hatching percentage of turtle eggs.

Phenological response of sea turtles to environmental variation across a species' northern range.

PubMed

Mazaris, Antonios D; Kallimanis, Athanasios S; Pantis, John D; Hays, Graeme C

2013-01-22

Variations in environmental parameters (e.g. temperature) that form part of global climate change have been associated with shifts in the timing of seasonal events for a broad range of organisms. Most studies evaluating such phenological shifts of individual taxa have focused on a limited number of locations, making it difficult to assess how such shifts vary regionally across a species range. Here, by using 1445 records of the date of first nesting for loggerhead sea turtles (Caretta caretta) at different breeding sites, on different continents and in different years across a broad latitudinal range (25-39° 'N), we demonstrate that the gradient of the relationship between temperature and the date of first breeding is steeper at higher latitudes, i.e. the phenological responses to temperature appear strongest at the poleward range limit. These findings support the hypothesis that biological changes in response to climate change will be most acute at the poleward range limits and are in accordance with the predictions of MacArthur's hypothesis that poleward range limit for species range is environmentally limited. Our findings imply that the poleward populations of loggerheads are more sensitive to climate variations and thus they might display the impacts of climate change sooner and more prominently.

Regional blood flow in sea turtles: implications for heat exchange in an aquatic ectotherm.

PubMed

Hochscheid, Sandra; Bentivegna, Flegra; Speakman, John R

2002-01-01

Despite substantial knowledge on thermoregulation in reptiles, the mechanisms involved in heat exchange of sea turtles have not been investigated in detail. We studied blood flow in the front flippers of two green turtles, Chelonia mydas, and four loggerhead turtles, Caretta caretta, using Doppler ultrasound to assess the importance of regional blood flow in temperature regulation. Mean blood flow velocity and heart rate were determined for the water temperature at which the turtles were acclimated (19.3 degrees-22.5 degrees C) and for several experimental water temperatures (17 degrees-32 degrees C) to which the turtles were exposed for a short time. Flipper circulation increased with increasing water temperature, whereas during cooling, flipper circulation was greatly reduced. Heart rate was also positively correlated with water temperature; however, there were large variations between individual heart rate responses. Body temperatures, which were additionally determined for the two green turtles and six loggerhead turtles, increased faster during heating than during cooling. Heating rates were positively correlated with the difference between acclimation and experimental temperature and negatively correlated with body mass. Our data suggest that by varying circulation of the front flippers, turtles are capable of either transporting heat quickly into the body or retaining heat inside the body, depending on the prevailing thermal demands.

Phenological response of sea turtles to environmental variation across a species' northern range

PubMed Central

Mazaris, Antonios D.; Kallimanis, Athanasios S.; Pantis, John D.; Hays, Graeme C.

2013-01-01

Variations in environmental parameters (e.g. temperature) that form part of global climate change have been associated with shifts in the timing of seasonal events for a broad range of organisms. Most studies evaluating such phenological shifts of individual taxa have focused on a limited number of locations, making it difficult to assess how such shifts vary regionally across a species range. Here, by using 1445 records of the date of first nesting for loggerhead sea turtles (Caretta caretta) at different breeding sites, on different continents and in different years across a broad latitudinal range (25–39° ′N), we demonstrate that the gradient of the relationship between temperature and the date of first breeding is steeper at higher latitudes, i.e. the phenological responses to temperature appear strongest at the poleward range limit. These findings support the hypothesis that biological changes in response to climate change will be most acute at the poleward range limits and are in accordance with the predictions of MacArthur's hypothesis that poleward range limit for species range is environmentally limited. Our findings imply that the poleward populations of loggerheads are more sensitive to climate variations and thus they might display the impacts of climate change sooner and more prominently. PMID:23193130

The geomagnetic environment in which sea turtle eggs incubate affects subsequent magnetic navigation behaviour of hatchlings.

PubMed

Fuxjager, Matthew J; Davidoff, Kyla R; Mangiamele, Lisa A; Lohmann, Kenneth J

2014-09-22

Loggerhead sea turtle hatchlings (Caretta caretta) use regional magnetic fields as open-ocean navigational markers during trans-oceanic migrations. Little is known, however, about the ontogeny of this behaviour. As a first step towards investigating whether the magnetic environment in which hatchlings develop affects subsequent magnetic orientation behaviour, eggs deposited by nesting female loggerheads were permitted to develop in situ either in the natural ambient magnetic field or in a magnetic field distorted by magnets placed around the nest. In orientation experiments, hatchlings that developed in the normal ambient field oriented approximately south when exposed to a field that exists near the northern coast of Portugal, a direction consistent with their migratory route in the northeastern Atlantic. By contrast, hatchlings that developed in a distorted magnetic field had orientation indistinguishable from random when tested in the same north Portugal field. No differences existed between the two groups in orientation assays involving responses to orbital movements of waves or sea-finding, neither of which involves magnetic field perception. These findings, to our knowledge, demonstrate for the first time that the magnetic environment present during early development can influence the magnetic orientation behaviour of a neonatal migratory animal. © 2014 The Author(s) Published by the Royal Society. All rights reserved.

Estimates of vital rates for a declining loggerhead turtle (Caretta caretta) subpopulation: implications for management

USGS Publications Warehouse

Lamont, Margaret M.; Fujisaki, Ikuko; Carthy, Raymond R.

2014-01-01

Because subpopulations can differ geographically, genetically and/or phenotypically, using data from one subpopulation to derive vital rates for another, while often unavoidable, is not optimal. We used a two-state open robust design model to analyze a 14-year dataset (1998–2011) from the St. Joseph Peninsula, Florida (USA; 29.748°, −85.400°) which is the densest loggerhead (Caretta caretta) nesting beach in the Northern Gulf of Mexico subpopulation. For these analyses, 433 individuals were marked of which only 7.2 % were observed re-nesting in the study area in subsequent years during the study period. Survival was estimated at 0.86 and is among the highest estimates for all subpopulations in the Northwest Atlantic population. The robust model estimated a nesting assemblage size that ranged from 32 to 230 individuals each year with an annual average of 110. The model estimates indicated an overall population decline of 17 %. The results presented here for this nesting group represent the first estimates for this subpopulation. These data provide managers with information specific to this subpopulation that can be used to develop recovery plans and conduct subpopulation-specific modeling exercises explicit to the challenges faced by turtles nesting in this region.

Body temperature stability achieved by the large body mass of sea turtles.

PubMed

Sato, Katsufumi

2014-10-15

To investigate the thermal characteristics of large reptiles living in water, temperature data were continuously recorded from 16 free-ranging loggerhead turtles, Caretta caretta, during internesting periods using data loggers. Core body temperatures were 0.7-1.7°C higher than ambient water temperatures and were kept relatively constant. Unsteady numerical simulations using a spherical thermodynamic model provided mechanistic explanations for these phenomena, and the body temperature responses to fluctuating water temperature can be simply explained by a large body mass with a constant thermal diffusivity and a heat production rate rather than physiological thermoregulation. By contrast, body temperatures increased 2.6-5.1°C in 107-152 min during their emergences to nest on land. The estimated heat production rates on land were 7.4-10.5 times the calculated values in the sea. The theoretical prediction that temperature difference between body and water temperatures would increase according to the body size was confirmed by empirical data recorded from several species of sea turtles. Comparing previously reported data, the internesting intervals of leatherback, green and loggerhead turtles were shorter when the body temperatures were higher. Sea turtles seem to benefit from a passive thermoregulatory strategy, which depends primarily on the physical attributes of their large body masses. © 2014. Published by The Company of Biologists Ltd.

Sporadic nesting reveals long distance colonisation in the philopatric loggerhead sea turtle (Caretta caretta).

PubMed

Carreras, Carlos; Pascual, Marta; Tomás, Jesús; Marco, Adolfo; Hochscheid, Sandra; Castillo, Juan José; Gozalbes, Patricia; Parga, Mariluz; Piovano, Susanna; Cardona, Luis

2018-01-23

The colonisation of new suitable habitats is crucial for species survival at evolutionary scale under changing environmental conditions. However, colonisation potential may be limited by philopatry that facilitates exploiting successful habitats across generations. We examine the mechanisms of long distance dispersal of the philopatric loggerhead sea turtle (Caretta caretta) by analysing 40 sporadic nesting events in the western Mediterranean. The analysis of a fragment of the mitochondrial DNA and 7 microsatellites of 121 samples from 18 of these nesting events revealed that these nests were colonising events associated with juveniles from distant populations feeding in nearby foraging grounds. Considering the temperature-dependent sex determination of the species, we simulated the effect of the incubation temperature and propagule pressure on a potential colonisation scenario. Our results indicated that colonisation will succeed if warm temperature conditions, already existing in some of the beaches in the area, extend to the whole western Mediterranean. We hypothesize that the sporadic nesting events in developmental foraging grounds may be a mechanism to overcome philopatry limitations thus increasing the dispersal capabilities of the species and the adaptability to changing environments. Sporadic nesting in the western Mediterranean can be viewed as potential new populations in a scenario of rising temperatures.

Phocine distemper virus: current knowledge and future directions.

PubMed

Duignan, Pádraig J; Van Bressem, Marie-Françoise; Baker, Jason D; Barbieri, Michelle; Colegrove, Kathleen M; De Guise, Sylvain; de Swart, Rik L; Di Guardo, Giovanni; Dobson, Andrew; Duprex, W Paul; Early, Greg; Fauquier, Deborah; Goldstein, Tracey; Goodman, Simon J; Grenfell, Bryan; Groch, Kátia R; Gulland, Frances; Hall, Ailsa; Jensen, Brenda A; Lamy, Karina; Matassa, Keith; Mazzariol, Sandro; Morris, Sinead E; Nielsen, Ole; Rotstein, David; Rowles, Teresa K; Saliki, Jeremy T; Siebert, Ursula; Waltzek, Thomas; Wellehan, James F X

2014-12-22

Phocine distemper virus (PDV) was first recognized in 1988 following a massive epidemic in harbor and grey seals in north-western Europe. Since then, the epidemiology of infection in North Atlantic and Arctic pinnipeds has been investigated. In the western North Atlantic endemic infection in harp and grey seals predates the European epidemic, with relatively small, localized mortality events occurring primarily in harbor seals. By contrast, PDV seems not to have become established in European harbor seals following the 1988 epidemic and a second event of similar magnitude and extent occurred in 2002. PDV is a distinct species within the Morbillivirus genus with minor sequence variation between outbreaks over time. There is now mounting evidence of PDV-like viruses in the North Pacific/Western Arctic with serological and molecular evidence of infection in pinnipeds and sea otters. However, despite the absence of associated mortality in the region, there is concern that the virus may infect the large Pacific harbor seal and northern elephant seal populations or the endangered Hawaiian monk seals. Here, we review the current state of knowledge on PDV with particular focus on developments in diagnostics, pathogenesis, immune response, vaccine development, phylogenetics and modeling over the past 20 years.

Phocine Distemper Virus: Current Knowledge and Future Directions

PubMed Central

Duignan, Pádraig J.; Van Bressem, Marie-Françoise; Baker, Jason D.; Barbieri, Michelle; Colegrove, Kathleen M.; De Guise, Sylvain; de Swart, Rik L.; Di Guardo, Giovanni; Dobson, Andrew; Duprex, W. Paul; Early, Greg; Fauquier, Deborah; Goldstein, Tracey; Goodman, Simon J.; Grenfell, Bryan; Groch, Kátia R.; Gulland, Frances; Hall, Ailsa; Jensen, Brenda A.; Lamy, Karina; Matassa, Keith; Mazzariol, Sandro; Morris, Sinead E.; Nielsen, Ole; Rotstein, David; Rowles, Teresa K.; Saliki, Jeremy T.; Siebert, Ursula; Waltzek, Thomas; Wellehan, James F.X.

2014-01-01

Phocine distemper virus (PDV) was first recognized in 1988 following a massive epidemic in harbor and grey seals in north-western Europe. Since then, the epidemiology of infection in North Atlantic and Arctic pinnipeds has been investigated. In the western North Atlantic endemic infection in harp and grey seals predates the European epidemic, with relatively small, localized mortality events occurring primarily in harbor seals. By contrast, PDV seems not to have become established in European harbor seals following the 1988 epidemic and a second event of similar magnitude and extent occurred in 2002. PDV is a distinct species within the Morbillivirus genus with minor sequence variation between outbreaks over time. There is now mounting evidence of PDV-like viruses in the North Pacific/Western Arctic with serological and molecular evidence of infection in pinnipeds and sea otters. However, despite the absence of associated mortality in the region, there is concern that the virus may infect the large Pacific harbor seal and northern elephant seal populations or the endangered Hawaiian monk seals. Here, we review the current state of knowledge on PDV with particular focus on developments in diagnostics, pathogenesis, immune response, vaccine development, phylogenetics and modeling over the past 20 years. PMID:25533658

PCB-associated changes in mRNA expression in killer whales (Orcinus orca) from the NE Pacific Ocean.

PubMed

Buckman, Andrea H; Veldhoen, Nik; Ellis, Graeme; Ford, John K B; Helbing, Caren C; Ross, Peter S

2011-12-01

Killer whales in the NE Pacific Ocean are among the world's most PCB-contaminated marine mammals, raising concerns about implications for their health. Sixteen health-related killer whale mRNA transcripts were analyzed in blubber biopsies collected from 35 free-ranging killer whales in British Columbia using real-time quantitative polymerase chain reaction. We observed PCB-related increases in the expression of five gene targets, including the aryl hydrocarbon receptor (AhR; r(2) = 0.83; p < 0.001), thyroid hormone α receptor (TRα; r(2) = 0.64; p < 0.001), estrogen α receptor (ERα; r(2) = 0.70; p < 0.001), interleukin 10 (IL-10; r(2) = 0.74 and 0.68, males and females, respectively; p < 0.001), and metallothionein 1 (MT1; r(2) = 0.58; p < 0.001). Best-fit models indicated that population (dietary preference), age, and sex were not confounding factors, except for IL-10, where males differed from females. While the population-level consequences are unclear, the PCB-associated alterations in mRNA abundance of such pivotal end points provide compelling evidence of adverse physiological effects of persistent environmental contaminants in these endangered killer whales.

Tracing the biosynthetic source of essential amino acids in marine turtles using delta13C fingerprints.

PubMed

Arthur, Karen E; Kelez, Shaleyla; Larsen, Thomas; Choy, C Anela; Popp, Brian N

2014-05-01

Plants, bacteria, and fungi produce essential amino acids (EAAs) with distinctive patterns of delta13C values that can be used as naturally occurring fingerprints of biosynthetic origin of EAAs in a food web. Because animals cannot synthesize EAAs and must obtain them from food, their tissues reflect delta13C(EAA) patterns found in diet, but it is not known how microbes responsible for hindgut fermentation in some herbivores influence the delta13C values of EAAs in their hosts' tissues. We examined whether distinctive delta13C fingerprints of hindgut flora are evident in the tissues of green turtles (Chelonia mydas), which are known to be facultative hindgut fermenters. We determined delta13C(EAA) values in tissues of green turtles foraging herbivorously in neritic habitats of Hawaii and compared them with those from green, olive ridley, and loggerhead turtles foraging carnivorously in oceanic environments of the central and southeast Pacific Ocean. Results of multivariate statistical analysis revealed two distinct groups that could be distinguished based on unique delta13C(EAA) patterns. A three-end-member predictive linear discriminant model indicated that delta13C(EAA) fingerprints existed in the tissues of carnivorous turtles that resembled patterns found in microalgae, which form the base of an oceanic food web, whereas herbivorous turtles derive EAAs from a bacterial or seagrass source. This study demonstrates the capacity for delta13C fingerprinting to establish the biosynthetic origin of EAAs in higher consumers, and that marine turtles foraging on macroalgal diets appear to receive nutritional supplementation from bacterial symbionts in their digestive system.

Conceptual Model Development for Sea Turtle Nesting Habitat: Support for USACE Navigation Projects

DTIC Science & Technology

2015-08-01

regional values. • Beach Width: The width of the beach (m) defines the region from the shoreline to the dune toe . Loggerhead turtles tend to prefer...primary drivers of the model parameters. • Beach Elevation: Beach elevation (m) is measured from the shoreline to the dune toe . Elevation influences...mapping, and morphological features in combination with imagery-derived environmental parameters (i.e., dune vegetation) have not been attempted

Pacific oyster (Crassostrea gigas) hemocyte are not affected by a mixture of pesticides in short-term in vitro assays.

PubMed

Moreau, Pierrick; Burgeot, Thierry; Renault, Tristan

2014-04-01

Pesticides are frequently detected in estuaries among the pollutants found in estuarine and coastal areas and may have major ecological consequences. They could endanger organism growth, reproduction, or survival. In the context of high-mortality outbreaks affecting Pacific oysters, Crassostrea gigas, in France since 2008, it appears of importance to determine the putative effects of pesticides on oyster susceptibility to infectious agents. Massive mortality outbreaks reported in this species, mainly in spring and summer, may suggest an important role played by the seasonal use of pesticides and freshwater input in estuarine areas where oyster farms are frequently located. To understand the impact of some pesticides detected in French waters, their effects on Pacific oyster hemocytes were studied through short-term in vitro experiments. Bivalve immunity is mainly supported by hemocytes eliminating pathogens by phagocytosis and producing compounds including lysosomal enzymes and antimicrobial molecules. In this study, oyster hemocytes were incubated with a mixture of 14 pesticides and metaldehyde alone, a molecule used to eliminate land mollusks. Hemocyte parameters including dead/alive cells, nonspecific esterase activities, intracytoplasmic calcium, lysosome number and activity, and phagocytosis were monitored by flow cytometry. No significant effect of pesticides tested at different concentrations was reported on oyster hemocytes maintained in vitro for short-term periods in the present study. It could be assumed that these oyster cells were resistant to pesticide exposure in tested conditions and developing in vivo assays appears as necessary to better understand the effects of pollutants on immune system in mollusks.

Survey of Florida green turtles for exposure to a disease-associated herpesvirus.

PubMed

Coberley, S S; Herbst, L H; Ehrhart, L M; Bagley, D A; Hirama, S; Jacobson, E R; Klein, P A

2001-12-05

A recently developed enzyme-linked immunosorbent assay (ELISA) was used to assess exposure of Florida wild green turtles Chelonia mydas to LETV, the herpesvirus associated with lung-eye-trachea disease (LETD). Plasma samples from 329 wild juvenile green turtles netted in the Indian River lagoon, along the Sebastian reef, or in the Trident basin (Indian River and Brevard Counties, Florida) were tested by ELISA for the presence of antibodies to LETV. Plasma samples from 180 wild juvenile green turtles were tested from these study sites to compare the prevalence of anti-LETV antibodies. While some plasma samples from each site contained anti-LETV antibodies (confirmed by Western blot analysis), plasma samples collected from the Indian River lagoon had statistically higher optical density values measured in the ELISA. No statistical differences were observed when these same plasma samples were analyzed for changes in the level of anti-LETV antibodies over 3 years (1997, 1998, and 1999). To explore the relationship between anti-LETV antibodies and fibropapillomatosis (FP), plasma from 133 green turtles scored for fibropapilloma tumor severity were tested by ELISA. There was no correlation between tumor severity and the presence of antibodies against LETV. Additional plasma samples collected from 16 tagged green turtles captured and sampled more than once (recaptures) were also tested to monitor antibody levels to LETV relative to the FP status of individual turtles over time. Again there was no clear relationship between FP tumor status and the presence of antibodies to LETV. Finally, ELISA tests on plasma from 13 nesting female turtles (9 green and 4 loggerhead) revealed high levels of anti-LETV antibodies in 11 individuals, including 2 loggerhead turtles. These results provide strong evidence that wild Florida green turtle populations at these 3 study sites are exposed to LETV or a closely related virus and that loggerhead turtles may be exposed as well. Based on a cutoff optical density value of 0.310, 71 out of the 329 wild Florida green turtles tested were seropositive for LETV antibodies (seroprevalence = 21.6%). In addition, no relationship between FP tumor severity or status and the presence of anti-LETV antibodies was found, further supporting the hypothesis that LETV and the FP-associated herpesvirus (FPHV) are separate infections of marine turtles.

Final Environmental Assessment for Advanced Littoral Reconnaissance Technologies (ALRT) Project at Eglin Air Force Base, Florida

DTIC Science & Technology

2008-05-28

the Gulf of Mexico, Bahamas, Greater Antilles, and Yucatan . Most loggerhead hatchlings originating from U.S. beaches are believed to spend their...beaches near Panama City; and (5) Yucatan Subpopulation occurring on the eastern Yucatan Peninsula, Mexico (Bowen et at. , 1993; Encalada et at. , 1998...be detected from the State of Florida’s Index Nesting Beach Survey program from 1989 to 2002. Nesting surveys in the Northwest Florida and Yucatan

Nest temperatures in a loggerhead nesting beach in Turkey is more determined by sea surface than air temperature.

PubMed

Girondot, Marc; Kaska, Yakup

2015-01-01

While climate change is now fully recognised as a reality, its impact on biodiversity is still not completely understood. To predict its impact, proxies coherent with the studied ecosystem or species are thus required. Marine turtles are threatened worldwide (though some populations are recovering) as they are particularly sensitive to temperature throughout their entire life cycle. This is especially true at the embryo stage when temperature affects both growth rates and sex determination. Nest temperature is thus of prime importance to understand the persistence of populations in the context of climate change. We analysed the nest temperature of 21 loggerheads (Caretta caretta) originating from Dalyan Beach in Turkey using day-lagged generalised mixed models with autocorrelation. Surprisingly, the selected model for nest temperature includes an effect for sea surface temperature 4-times higher than for air temperature. We also detected a very significant effect of metabolic heating during development compatible with what is already known about marine turtle nests. Our new methodology allows the prediction of marine turtle nest temperatures with good precision based on a combination of air temperature measured at beach level and sea surface temperature in front of the beach. These data are available in public databases for most of the beaches worldwide. Copyright © 2014 Elsevier Ltd. All rights reserved.

Magnetic navigation behavior and the oceanic ecology of young loggerhead sea turtles.

PubMed

Putman, Nathan F; Verley, Philippe; Endres, Courtney S; Lohmann, Kenneth J

2015-04-01

During long-distance migrations, animals navigate using a variety of sensory cues, mechanisms and strategies. Although guidance mechanisms are usually studied under controlled laboratory conditions, such methods seldom allow for navigation behavior to be examined in an environmental context. Similarly, although realistic environmental models are often used to investigate the ecological implications of animal movement, explicit consideration of navigation mechanisms in such models is rare. Here, we used an interdisciplinary approach in which we first conducted lab-based experiments to determine how hatchling loggerhead sea turtles (Caretta caretta) respond to magnetic fields that exist at five widely separated locations along their migratory route, and then studied the consequences of the observed behavior by simulating it within an ocean circulation model. Magnetic fields associated with two geographic regions that pose risks to young turtles (due to cold wintertime temperatures or potential displacement from the migratory route) elicited oriented swimming, whereas fields from three locations where surface currents and temperature pose no such risk did not. Additionally, at locations with fields that elicited oriented swimming, simulations indicate that the observed behavior greatly increases the likelihood of turtles advancing along the migratory pathway. Our findings suggest that the magnetic navigation behavior of sea turtles is intimately tied to their oceanic ecology and is shaped by a complex interplay between ocean circulation and geomagnetic dynamics. © 2015. Published by The Company of Biologists Ltd.

Three closely related herpesviruses are associated with fibropapillomatosis in marine turtles

USGS Publications Warehouse

Quackenbush, S.L.; Work, Thierry M.; Balazs, George H.; Casey, Rufina N.; Rovnak, J.; Chaves, A.; duToit, L.; Baines, J.D.; Parrish, C.R.; Bowser, Paul R.; Casey, James W.

1998-01-01

Green turtle fibropapillomatosis is a neoplastic disease of increasingly significant threat to the survivability of this species. Degenerate PCR primers that target highly conserved regions of genes encoding herpesvirus DNA polymerases were used to amplify a DNA sequence from fibropapillomas and fibromas from Hawaiian and Florida green turtles. All of the tumors tested (n= 23) were found to harbor viral DNA, whereas no viral DNA was detected in skin biopsies from tumor-negative turtles. The tissue distribution of the green turtle herpesvirus appears to be generally limited to tumors where viral DNA was found to accumulate at approximately two to five copies per cell and is occasionally detected, only by PCR, in some tissues normally associated with tumor development. In addition, herpesviral DNA was detected in fibropapillomas from two loggerhead and four olive ridley turtles. Nucleotide sequencing of a 483-bp fragment of the turtle herpesvirus DNA polymerase gene determined that the Florida green turtle and loggerhead turtle sequences are identical and differ from the Hawaiian green turtle sequence by five nucleotide changes, which results in two amino acid substitutions. The olive ridley sequence differs from the Florida and Hawaiian green turtle sequences by 15 and 16 nucleotide changes, respectively, resulting in four amino acid substitutions, three of which are unique to the olive ridley sequence. Our data suggest that these closely related turtle herpesviruses are intimately involved in the genesis of fibropapillomatosis.

The characterization of cytosolic glutathione transferase from four species of sea turtles: loggerhead (Caretta caretta), green (Chelonia mydas), olive ridley (Lepidochelys olivacea), and hawksbill (Eretmochelys imbricata).

PubMed

Richardson, Kristine L; Gold-Bouchot, Gerardo; Schlenk, Daniel

2009-08-01

Glutathione s-transferases (GST) play a critical role in the detoxification of exogenous and endogenous electrophiles, as well as the products of oxidative stress. As compared to mammals, GST activity has not been extensively characterized in reptiles. Throughout the globe, most sea turtle populations face the risk of extinction. Of the natural and anthropogenic threats to sea turtles, the effects of environmental chemicals and related biochemical mechanisms, such as GST catalyzed detoxification, are probably the least understood. In the present study, GST activity was characterized in four species of sea turtles with varied life histories and feeding strategies: loggerhead (Caretta caretta), green (Chelonia mydas), olive ridley (Lepidochelys olivacea), and hawksbill (Eretmochelys imbricata). Although similar GST kinetics was observed between species, rates of catalytic activities using class-specific substrates show inter- and intra-species variation. GST from the spongivorous hawksbill sea turtle shows 3-4.5 fold higher activity with the substrate 4-nitrobenzylchloride than the other 3 species. GST from the herbivorous green sea turtle shows 3 fold higher activity with the substrate ethacrynic acid than the carnivorous olive ridley sea turtle. The results of this study may provide insight into differences in biotransformation potential in the four species of sea turtles and the possible health impacts of contaminant biotransformation by sea turtles.

De novo Assembly of the Indo-Pacific Humpback Dolphin Leucocyte Transcriptome to Identify Putative Genes Involved in the Aquatic Adaptation and Immune Response

PubMed Central

Xia, Jia; Yang, Lili; Chen, Jialin; Wu, Yuping; Yi, Meisheng

2013-01-01

Background The Indo-Pacific humpback dolphin (Sousa chinensis), a marine mammal species inhabited in the waters of Southeast Asia, South Africa and Australia, has attracted much attention because of the dramatic decline in population size in the past decades, which raises the concern of extinction. So far, this species is poorly characterized at molecular level due to little sequence information available in public databases. Recent advances in large-scale RNA sequencing provide an efficient approach to generate abundant sequences for functional genomic analyses in the species with un-sequenced genomes. Principal Findings We performed a de novo assembly of the Indo-Pacific humpback dolphin leucocyte transcriptome by Illumina sequencing. 108,751 high quality sequences from 47,840,388 paired-end reads were generated, and 48,868 and 46,587 unigenes were functionally annotated by BLAST search against the NCBI non-redundant and Swiss-Prot protein databases (E-value<10−5), respectively. In total, 16,467 unigenes were clustered into 25 functional categories by searching against the COG database, and BLAST2GO search assigned 37,976 unigenes to 61 GO terms. In addition, 36,345 unigenes were grouped into 258 KEGG pathways. We also identified 9,906 simple sequence repeats and 3,681 putative single nucleotide polymorphisms as potential molecular markers in our assembled sequences. A large number of unigenes were predicted to be involved in immune response, and many genes were predicted to be relevant to adaptive evolution and cetacean-specific traits. Conclusion This study represented the first transcriptome analysis of the Indo-Pacific humpback dolphin, an endangered species. The de novo transcriptome analysis of the unique transcripts will provide valuable sequence information for discovery of new genes, characterization of gene expression, investigation of various pathways and adaptive evolution, as well as identification of genetic markers. PMID:24015242

De novo assembly of the Indo-Pacific humpback dolphin leucocyte transcriptome to identify putative genes involved in the aquatic adaptation and immune response.

PubMed

Gui, Duan; Jia, Kuntong; Xia, Jia; Yang, Lili; Chen, Jialin; Wu, Yuping; Yi, Meisheng

2013-01-01

The Indo-Pacific humpback dolphin (Sousa chinensis), a marine mammal species inhabited in the waters of Southeast Asia, South Africa and Australia, has attracted much attention because of the dramatic decline in population size in the past decades, which raises the concern of extinction. So far, this species is poorly characterized at molecular level due to little sequence information available in public databases. Recent advances in large-scale RNA sequencing provide an efficient approach to generate abundant sequences for functional genomic analyses in the species with un-sequenced genomes. We performed a de novo assembly of the Indo-Pacific humpback dolphin leucocyte transcriptome by Illumina sequencing. 108,751 high quality sequences from 47,840,388 paired-end reads were generated, and 48,868 and 46,587 unigenes were functionally annotated by BLAST search against the NCBI non-redundant and Swiss-Prot protein databases (E-value<10(-5)), respectively. In total, 16,467 unigenes were clustered into 25 functional categories by searching against the COG database, and BLAST2GO search assigned 37,976 unigenes to 61 GO terms. In addition, 36,345 unigenes were grouped into 258 KEGG pathways. We also identified 9,906 simple sequence repeats and 3,681 putative single nucleotide polymorphisms as potential molecular markers in our assembled sequences. A large number of unigenes were predicted to be involved in immune response, and many genes were predicted to be relevant to adaptive evolution and cetacean-specific traits. This study represented the first transcriptome analysis of the Indo-Pacific humpback dolphin, an endangered species. The de novo transcriptome analysis of the unique transcripts will provide valuable sequence information for discovery of new genes, characterization of gene expression, investigation of various pathways and adaptive evolution, as well as identification of genetic markers.

Killer whales (Orcinus orca) face protracted health risks associated with lifetime exposure to PCBs.

PubMed

Hickie, Brendan E; Ross, Peter S; Macdonald, Robie W; Ford, John K B

2007-09-15

Polychlorinated biphenyl (PCB) concentrations declined rapidly in environmental compartments and most biota following implementation of regulations in the 1970s. However, the metabolic recalcitrance of PCBs may delay responses to such declines in large, long-lived species, such as the endangered and highly PCB-contaminated resident killer whales (Orcinus orca) of the Northeastern Pacific Ocean. To investigate the influence of life history on PCB-related health risks, we developed models to estimate PCB concentrations in killer whales during the period from 1930 forward to 2030, both within a lifetime (approximately 50 years) and across generations, and then evaluated these in the context of health effects thresholds established for marine mammals. Modeled PCB concentrations in killer whales responded slowly to changes in loadings to the environment as evidenced by slower accumulation and lower magnitude increases in PCB concentrations relative to prey, and a delayed decline that was particularly evident in adult males. Since PCBs attained peak levels well above the effects threshold (17 mg/kg lipid) in approximately 1969, estimated concentrations in both the northern and the more contaminated southern resident populations have declined gradually. Projections suggest that the northern resident population could largely fall below the threshold concentration by 2030 while the endangered southern residents may not do so until at least 2063. Long-lived aquatic mammals are therefore not protected from PCBs by current dietary residue guidelines.

Cape Blanco wind energy feasibility study. Terrestrial ecology

NASA Astrophysics Data System (ADS)

1986-04-01

The project site is a series of grassland bench terraces on a bluff above the Pacific Ocean. Because the site has a long history of use for sheep grazing, the vegetation is mainly pasture grasses (64 percent of the site), with patches of mixed forest cover (26 percent), and wetlands (10 percent) in the ravine dividing the site. Because of the open nature of the site, the proposed arrangement of the wind turbines and relatively little need for site modification, there are few environmental concerns. The main concerns are the potential for bird collisions with the turbines and associated apparatus and threatened and endangered bird species. The expected impacts of the project on vegetation, mammals, amphibians, reptiles, and fish have been determined to be minor. A series of calculations were made using formulas from the literature to estimate bird kills from collisions with the wind turbines and associated apparatus. Less than one-tenth of 1 percent of the vulnerable migrating bird population was determined to be subject to death by collision. Thus, impacts to birds were also determined to be insignificant. The other major concern is the potential impacts of the project on five species of birds from the area that are recognized as threatened or endangered. The site provides no unique or especially important habitat for any of the five species. The likelihood of project impacts to any of them is low.

Stable Isotopic Insights into the Foraging Ecology of an Endangered Marine Predator, the Hawaiian Petrel

NASA Astrophysics Data System (ADS)

Wiley, A. E.; Ostrom, P. H.; James, H. F.

2010-12-01

Seabirds play vital roles in their ecosystems, both as predators in their oceanic foraging grounds and conduits of marine nutrients to island nesting sites. Despite growing evidence that food availability limits seabird populations, characterization of the diet and even foraging locations of some seabird species remains elusive. Here, we use stable carbon (δ13C) and nitrogen (δ15N) isotopes to study the foraging ecology of an endangered and poorly known seabird, the Hawaiian petrel (Pterodroma sandwichensis). This species nests solely on the main Hawaiian Islands but forages widely across the NE Pacific, sometimes traveling over 10,000km on single foraging trips. δ13C and δ15N values vary with trophic level and at the base of food webs throughout the marine range of the Hawaiian petrel. Thus, we are able to use isotope signatures in modern and ancient petrel tissues to track spatial and temporal variation in foraging location and diet. We find strong evidence of foraging segregation between populations, with hatch-year birds from the island of Hawaii exhibiting feather δ15N and δ13C values over 3‰ and 1 ‰ higher, respectively, than those found in Maui and Kauai hatch-year birds. There is also significant variation in δ15N values between feathers from Kauai, Hawaii, and Maui adults, indicating additional foraging segregation during the winter molt. To distinguish between the effects of trophic level and foraging location, we relate our data to those from seabirds with known diet and foraging location, as well as to previous characterizations of isoscapes in the NE Pacific and at-sea observations of our study species. Finally, we track Hawaiian petrel foraging ecology back in time through examination of stable isotope values in historical feathers and ancient bone collagen. We find that, despite a species-wide decline in δ15N values (consistent with trophic level decline), populations have maintained divergent isotopic niches through at least the past 1,000 years. These data offer rare insight into the long-term fluxuations of seabird foraging habits as well as important information for the conservation of Hawaiian petrels and ultimately, the ecosystems they inhabit.

Insights into Korean red fox (Vulpes vulpes) based on mitochondrial cytochrome b sequence variation in East Asia.

PubMed

Yu, Jeong-Nam; Han, Sang-Hoon; Kim, Bang-Hwan; Kryukov, Alexey P; Kim, Soonok; Lee, Byoung-Yoon; Kwak, Myounghai

2012-11-01

The red fox (Vulpes vulpes) is the most widely distributed terrestrial carnivore in the world, occurring throughout most of North America, Europe, Asia, and North Africa. In South Korea, however, this species has been drastically reduced due to habitat loss and poaching. Consequently, it is classified as an endangered species in Korea. As a first step of a planned red fox restoration project, preserved red fox museum specimens were used to determine the genetic status of red foxes that had previously inhabited South Korea against red foxes from neighboring countries. Total eighty three mtDNA cytochrome b sequences, including 22 newly obtained East Asian red fox sequences and worldwide red fox sequences from NCBI, were clustered into three clades (i.e., I, II, and III) based on haplotype network and neighbor-joining trees. The mean genetic distance between clades was 2.0%. Clade III contained South Korean and other East Asian samples in addition to Eurasian and North Pacific individuals. In clade III, South Korean individuals were separated into two lineages of Eurasian and North Pacific groups, showing unclear phylogeographic structuring and admixture. This suggests that South Korean red fox populations may have been composed of individuals from these two different genetic lineages.

Dynamics of soundscape in a shallow water marine environment: a study of the habitat of the Indo-Pacific humpback dolphin.

PubMed

Guan, Shane; Lin, Tzu-Hao; Chou, Lien-Siang; Vignola, Joseph; Judge, John; Turo, Diego

2015-05-01

The underwater acoustic field is an important ecological element for many aquatic animals. This research examines the soundscape of a critically endangered Indo-Pacific humpback dolphin population in the shallow water environment off the west coast of Taiwan. Underwater acoustic recordings were conducted between late spring and late fall in 2012 at Yunlin (YL), which is close to a shipping lane, and Waisanding (WS), which is relatively pristine. Site-specific analyses were performed on the dynamics of the temporal and spectral acoustic characteristics for both locations. The results highlight the dynamics of the soundscape in two major octave bands: 150-300 Hz and 1.2-2.4 kHz. The acoustic energy in the former frequency band is mainly associated with passing container vessels near YL, while the latter frequency band is from sonic fish chorus at nighttime in both recording sites. In addition, large variation of low frequency acoustic energy throughout the study period was noticed at WS, where the water depths ranged between 1.5 and 4.5 m depending on tidal cycle. This phenomenon suggests that besides certain sound sources in the environment, the coastal soundscape may also be influenced by its local bathymetry and the dynamics of the physical environment.

Wildfire exposure analysis on the national forests in the Pacific Northwest, USA.

PubMed

Ager, Alan A; Buonopane, Michelle; Reger, Allison; Finney, Mark A

2013-06-01

We analyzed wildfire exposure for key social and ecological features on the national forests in Oregon and Washington. The forests contain numerous urban interfaces, old growth forests, recreational sites, and habitat for rare and endangered species. Many of these resources are threatened by wildfire, especially in the east Cascade Mountains fire-prone forests. The study illustrates the application of wildfire simulation for risk assessment where the major threat is from large and rare naturally ignited fires, versus many previous studies that have focused on risk driven by frequent and small fires from anthropogenic ignitions. Wildfire simulation modeling was used to characterize potential wildfire behavior in terms of annual burn probability and flame length. Spatial data on selected social and ecological features were obtained from Forest Service GIS databases and elsewhere. The potential wildfire behavior was then summarized for each spatial location of each resource. The analysis suggested strong spatial variation in both burn probability and conditional flame length for many of the features examined, including biodiversity, urban interfaces, and infrastructure. We propose that the spatial patterns in modeled wildfire behavior could be used to improve existing prioritization of fuel management and wildfire preparedness activities within the Pacific Northwest region. © 2012 Society for Risk Analysis.

Seasonal variability and detection range modeling of baleen whale calls in the Gulf of Alaska, 1999-2002.

PubMed

Stafford, Kathleen M; Mellinger, David K; Moore, Sue E; Fox, Christopher G

2007-12-01

Five species of large whales, including the blue (Balaenoptera musculus), fin (B. physalus), sei (B. borealis), humpback (Megaptera novaeangliae), and North Pacific right (Eubalaena japonica), were the target of commercial harvests in the Gulf of Alaska (GoA) during the 19th through mid-20th Centuries. Since this time, there have been a few summer time visual surveys for these species, but no overview of year-round use of these waters by endangered whales primarily because standard visual survey data are difficult and costly. From October 1999-May 2002, moored hydrophones were deployed in six locations in the GoA to record whale calls. Reception of calls from fin, humpback, and blue whales and an unknown source, called Watkins' whale, showed seasonal and geographic variation. Calls were detected more often during the winter than during the summer, suggesting that animals inhabit the GoA year-round. To estimate the distance at which species-diagnostic calls could be heard, parabolic equation propagation loss models for frequencies characteristic of each of each call type were run. Maximum detection ranges in the subarctic North Pacific ranged from 45 to 250 km among three species (fin, humpback, blue), although modeled detection ranges varied greatly with input parameters and choice of ambient noise level.

A tour de force by Hawaii’s invasive mammals: Establishment, takeover, and ecosystem restoration through eradication

USGS Publications Warehouse

Hess, Steve

2016-01-01

Invasive mammals have irreversibly altered ecosystems of Hawai‘i and other tropical Pacific islands in numerous cases through novel herbivory, predation, and diseases, thereby causing the disproportionate extinction of flora and fauna that occur nowhere else on Earth. The control and eradication of invasive mammals is the single most expensive management activity necessary for restoring ecological integrity to many natural areas of Hawai‘i and other Pacific Islands, and have already advanced the restoration of native biota by removing herbivorous ungulates from >750 km2. Rodenticides which have been tested and registered for hand and aerial broadcast in Hawai‘i have been used to eradicate rats from remote islands to protect nesting seabirds and are now being applied to larger islands to protect forest birds. The exclusion of other invasive mammals is now being undertaken with more sophisticated control techniques and fences. New fence designs are capable of excluding all mammals from areas to protect endangered native birds. Although the eradication of mammals from large areas has resulted in the restoration of some ecosystem processes such as natural forest regeneration, changes in other processes such as fire regimes, nutrient cycling, and invasive plant proliferation remain more difficult to reverse at larger landscape scales.

Annual Adaptive Management Report for Compensatory Mitigation at Keyport Lagoon: Mitigation of Pier B Development at the Bremerton Naval Facilities - Compensatory Mitigation at Keyport Lagoon - Naval Underwater Warfare Center Division - Keyport, Washington

DOE Office of Scientific and Technical Information (OSTI.GOV)

Vavrinec, John; Borde, Amy B.; Woodruff, Dana L.

Unites States Navy capital improvement projects are designed to modernize and improve mission capacity. Such capital improvement projects often result in unavoidable environmental impacts by increasing over-water structures, which results in a loss of subtidal habitat within industrial areas of Navy bases. In the Pacific Northwest, compensatory mitigation often targets alleviating impacts to Endangered Species Act-listed salmon species. The complexity of restoring large systems requires limited resources to target successful and more coordinated mitigation efforts to address habitat loss and improvements in water quality that will clearly contribute to an improvement at the site scale and can then be linkedmore » to a cumulative net ecosystem improvement.« less

Impact and Recovery Pattern of a Spring Fire on a Pacific Coast Marsh - Observations and Implications for Endangered Species

NASA Astrophysics Data System (ADS)

Brown, L. N.; Willis, K. S.; Ambrose, R. F.; MacDonald, G. M.

2015-12-01

The flammability of California coastal marsh vegetation is highest in winter and spring when dominant high marsh plants such as Sarcocornia pacifica are dormant. With climate change the number of cool-season fires are increasing in the state, and marsh systems are becoming more vulnerable to fire disturbance. Very little information exists in peer-reviewed or grey literature on the presence of fire in Pacific Coast tidal marshes. In 1993, the Green Meadows fire in Ventura County, California burned a small portion of tidally influenced Sarcocornia­-dominated marsh at Point Mugu. After the May 2013 Springs Fire burned a similar portion of the salt marsh vegetation, we conducted a two-year vegetation recovery survey using transects of surface vegetation plots and MODIS derived NDVI remote sensing monitoring. Recovery during the first year was limited. Sixteen months into the recovery period, percent plant coverage reached an average of approximately 60% for all plots in the burned area, as opposed to an average of 100% in control plots, and remained at that level for the duration of the study. NDVI did not approach near pre-fire conditions until 19 months after the fire. While recovery may have been influenced by California's current extreme drought conditions, the recurrence of fire and rate of recovery raise many important questions as to the role of fire in Pacific coast tidal marshes. For example, the lack of Salicornia cover over more than an entire breeding season would be detrimental to protected species such as Rallus obsoletus. Fire adds new vulnerabilities on critical tidal marsh habitat already taxed by the threat of sea-level rise, coastal squeeze and invasive species.

Temporal and spatial trends of perfluorinated compounds in juvenile loggerhead sea turtles (Caretta caretta) along the East Coast of the United States.

PubMed

O'Connell, Steven G; Arendt, Michael; Segars, Al; Kimmel, Tricia; Braun-McNeill, Joanne; Avens, Larisa; Schroeder, Barbara; Ngai, Lily; Kucklick, John R; Keller, Jennifer M

2010-07-01

Perfluorinated compounds (PFCs) are globally distributed persistent environmental contaminants. This study provides temporal trends as well as large-scale spatial trends of PFC concentrations in threatened juvenile loggerhead sea turtles near or from Florida Bay (FL Bay), Cape Canaveral (FL), Charleston (SC), Core Sound (NC), and Chesapeake Bay (MD). PFCs were extracted from 163 plasma and serum samples using solid-phase extraction and quantified with LC-MS/MS. Concentrations of six compounds significantly varied by site, with MD or FL Bay turtles having the highest concentrations. Perfluorooctane sulfonate (PFOS) was the predominant PFC at all sites (range: 0.31 ng/g to 39.0 ng/g). FL Bay turtles, compared to other sites, accumulated a unique PFC pattern with a higher proportion of perfluorocarboxylates compared to PFOS. Furthermore, this study was the first to statistically correlate wildlife PFC concentrations with human population, used as a proxy for urbanization and sources of PFCs to the environment. Positive relationships were found in which human population accounted for 75 and 81% of the variance in turtle PFOS and perfluoroundecanoate (PFUnA) concentrations (p = 0.06 and 0.04), respectively. PFOS and perfluorononanoate (PFNA) significantly decreased from 2000-2008 in SC turtles annually by 20 and 11%, respectively (p

Impact of gas emboli and hyperbaric treatment on respiratory function of loggerhead sea turtles (Caretta caretta).

PubMed

Portugues, Cyril; Crespo-Picazo, Jose Luis; García-Párraga, Daniel; Altimiras, Jordi; Lorenzo, Teresa; Borque-Espinosa, Alicia; Fahlman, Andreas

2018-01-01

Fisheries interactions are the most serious threats for sea turtle populations. Despite the existence of some rescue centres providing post-traumatic care and rehabilitation, adequate treatment is hampered by the lack of understanding of the problems incurred while turtles remain entrapped in fishing gears. Recently it was shown that bycaught loggerhead sea turtles ( Caretta caretta ) could experience formation of gas emboli (GE) and develop decompression sickness (DCS) after trawl and gillnet interaction. This condition could be reversed by hyperbaric O 2 treatment (HBOT). The goal of this study was to assess how GE alters respiratory function in bycaught turtles before recompression therapy and measure the improvement after this treatment. Specifically, we assessed the effect of DCS on breath duration, expiratory and inspiratory flow and tidal volume ( V T ), and the effectiveness of HBOT to improve these parameters. HBOT significantly increased respiratory flows by 32-45% while V T increased by 33-35% immediately after HBOT. Repeated lung function testing indicated a temporal increase in both respiratory flow and V T for all bycaught turtles, but the changes were smaller than those seen immediately following HBOT. The current study suggests that respiratory function is significantly compromised in bycaught turtles with GE and that HBOT effectively restores lung function. Lung function testing may provide a novel means to help diagnose the presence of GE, be used to assess treatment efficacy, and contribute to sea turtle conservation efforts.

Impact of gas emboli and hyperbaric treatment on respiratory function of loggerhead sea turtles (Caretta caretta)

PubMed Central

Portugues, Cyril; Crespo-Picazo, Jose Luis; García-Párraga, Daniel; Altimiras, Jordi; Lorenzo, Teresa; Borque-Espinosa, Alicia

2018-01-01

Abstract Fisheries interactions are the most serious threats for sea turtle populations. Despite the existence of some rescue centres providing post-traumatic care and rehabilitation, adequate treatment is hampered by the lack of understanding of the problems incurred while turtles remain entrapped in fishing gears. Recently it was shown that bycaught loggerhead sea turtles (Caretta caretta) could experience formation of gas emboli (GE) and develop decompression sickness (DCS) after trawl and gillnet interaction. This condition could be reversed by hyperbaric O2 treatment (HBOT). The goal of this study was to assess how GE alters respiratory function in bycaught turtles before recompression therapy and measure the improvement after this treatment. Specifically, we assessed the effect of DCS on breath duration, expiratory and inspiratory flow and tidal volume (VT), and the effectiveness of HBOT to improve these parameters. HBOT significantly increased respiratory flows by 32–45% while VT increased by 33–35% immediately after HBOT. Repeated lung function testing indicated a temporal increase in both respiratory flow and VT for all bycaught turtles, but the changes were smaller than those seen immediately following HBOT. The current study suggests that respiratory function is significantly compromised in bycaught turtles with GE and that HBOT effectively restores lung function. Lung function testing may provide a novel means to help diagnose the presence of GE, be used to assess treatment efficacy, and contribute to sea turtle conservation efforts. PMID:29340152

Marine turtle mitogenome phylogenetics and evolution.

PubMed

Duchene, Sebastián; Frey, Amy; Alfaro-Núñez, Alonzo; Dutton, Peter H; Thomas P Gilbert, M; Morin, Phillip A

2012-10-01

The sea turtles are a group of cretaceous origin containing seven recognized living species: leatherback, hawksbill, Kemp's ridley, olive ridley, loggerhead, green, and flatback. The leatherback is the single member of the Dermochelidae family, whereas all other sea turtles belong in Cheloniidae. Analyses of partial mitochondrial sequences and some nuclear markers have revealed phylogenetic inconsistencies within Cheloniidae, especially regarding the placement of the flatback. Population genetic studies based on D-Loop sequences have shown considerable structuring in species with broad geographic distributions, shedding light on complex migration patterns and possible geographic or climatic events as driving forces of sea-turtle distribution. We have sequenced complete mitogenomes for all sea-turtle species, including samples from their geographic range extremes, and performed phylogenetic analyses to assess sea-turtle evolution with a large molecular dataset. We found variation in the length of the ATP8 gene and a highly variable site in ND4 near a proton translocation channel in the resulting protein. Complete mitogenomes show strong support and resolution for phylogenetic relationships among all sea turtles, and reveal phylogeographic patterns within globally-distributed species. Although there was clear concordance between phylogenies and geographic origin of samples in most taxa, we found evidence of more recent dispersal events in the loggerhead and olive ridley turtles, suggesting more recent migrations (<1 Myr) in these species. Overall, our results demonstrate the complexity of sea-turtle diversity, and indicate the need for further research in phylogeography and molecular evolution. Published by Elsevier Inc.

Polychlorinated biphenyls and biotransformation enzymes in three species of sea turtles from the Baja California peninsula of Mexico.

PubMed

Richardson, K L; Lopez Castro, M; Gardner, S C; Schlenk, D

2010-01-01

Concentrations of polychlorinated biphenyls (PCBs) as well as the expression patterns of cytochrome P450 (CYP) enzymes and glutathione-S-transferase (GST) activities were measured in livers of loggerhead (Caretta caretta), green (Chelonia mydas), and olive ridley (Lepidocheyls olivacea) sea turtles from the Baja California peninsula of Mexico. The mean concentrations of total PCBs were 18.1, 10.5, and 15.2 ng/g wet weight (ww) respectively for the three species and PCB 153 was the dominant congener in all samples. Total PCB concentrations were dominated by penta- and hexa-chlorinated biphenyls. The mean estimated TEQs were 42.8, 22.9, and 10.4 pg/g (ww) for loggerhead, green, and olive ridley, respectively, and more than 70% was accounted for by non-ortho PCBs. Western blots revealed the presence of hepatic microsomal proteins that cross-reacted with anti-CYP2K1 and anti-CYP3A27 antibodies but not with anti-CYP1A antibody. There were no significant differences in GST activities between species. Grouping congeners based on structure-activity relationships for CYP isoenzymes suggested limited activity of CYP1A contribution to PCB biotransformation in sea turtles. These results suggest potential accumulation of PCBs that are CYP1A substrates and provide evidence for biotransformation capacity, which differs from known animal models, highlighting the need for further studies in reptiles, particularly those threatened with extinction.

Monitoring mercury in the loggerhead sea turtle, Caretta caretta.

PubMed

Day, Rusty D; Christopher, Steven J; Becker, Paul R; Whitaker, David W

2005-01-15

The validity of using blood samples and keratinized scutes for nonlethal routine monitoring of mercury (Hg) in loggerhead sea turtles, Caretta caretta, is evaluated in the context of how effectively these matrixes predict internal tissue Hg burdens and the different temporal scales of exposure they represent. Total Hg (THg) was measured in blood and scutes collected from live captures (n = 34) and liver, kidney, muscle, spinal cord, blood, and scutes collected from freshly stranded loggerhead turtles (n = 6) along the coast of the southeastern United States. Linear regressions between monitoring compartments and internal tissues from stranded animals were all statistically significant (r2 > 0.805, p < 0.015) but varied in their utility as a predictive tool depending on which tissues were paired. Blood was an effective predictor of THg in muscle (r2 = 0.988, p < 0.0001) and spinal cord (r2 = 0.988, p < 0.0001), while scute was the most accurate predictor of THg in liver (r2 = 0.948, p = 0.0010). The strength of the relationship between tissues types is believed to reflect the similarity in the temporal scales they represent and the variability in the fraction of methylmercury present. The stability of Hg in the scute matrix makes this tissue preferable for approximating long-term exposure, while blood Hg levels can be affected by recent changes in Hg intake. THg levels in blood and scutes from live captures were highly correlated (linear regression r2 = 0.926, p < 0.0001) and increased significantly with body mass (r2 = 0.173, p = 0.016 and r2 = 0.187, p = 0.012 respectively), further supporting thatthere is a component reflecting long-term accumulation of Hg in these matrixes. We also present a novel technique using the residuals from the blood-scute regression as an index of recent exposure (IRE). The interpretation of this value is derived from the comparison between the most recent Hg intake (which contributes to the Hg measured in the blood) relative to the average past intake (which is recorded in the scute). A stepwise multiple regression revealed a significant positive relationship between the IRE and the proximity of the capture site to the nearest major industrial river mouth (p = 0.0102). This suggests that there is an elevation of bioavailable Hg in nearshore habitats where terrestrial influences and anthropogenic impacts are high. Seasonal foraging site fidelity and the variability in environmental Hg may explain the high intraspecific variability and occasional highly contaminated turtle seen in this and previous studies.

Lessons from the past: isotopes of an endangered rail as indicators of underlying change to tidal marsh habitats

USGS Publications Warehouse

Merritt, Angela M.; Casazza, Michael L.; Overton, Cory T.; Takekawa, John Y.; Hahn, Thomas P.; Hull, Joshua M.

2017-01-01

Introduction: Tidal marsh systems along the Pacific coast of the United States have experienced substantial stress and loss of area and ecosystem function, which we examined by using the endangered California Ridgway’s Rail, Rallus obsoletus obsoletus (‘rail’) as an indicator of its tidal marsh habitat in the San Francisco Estuary. We organized a collection of historical (1885-1940) and modern (2005-2014) rail feathers and analyzed the feather isotope means for delta carbon (δ13C), sulfur (δ34S), and nitrogen (δ15N) by region and time period.Outcomes: Feather isotopes represented the primary foraging habitat during historical then modern time periods. Neither individual nor regional rail feather isotopes suggested freshwater or terrestrial foraging by the rail. Three regions with both historic and modern feather isotopes revealed non-uniform spatial shifts in isotope levels consistent with a marine based food web and significant δ15N enrichment.Discussion: Our results supported the rail’s status as a generalist forager and obligate tidal marsh species throughout the historic record. The variable isoscape trends generated from feather isotope means illustrated a modern loss of the isotopic homogeneity between regions of historical tidal marsh, which correlated with spatially-explicit habitat alterations such as increasing biological invasions and sewage effluent over time.Conclusion: These findings have reinforced the importance of tidal marsh conservation in the face of ongoing underlying changes to these important ecosystems.

Spatial assessment of the potential risk of avian influenza A virus infection in three raptor species in Japan

PubMed Central

MORIGUCHI, Sachiko; ONUMA, Manabu; GOKA, Koichi

2016-01-01

Avian influenza A, a highly pathogenic avian influenza, is a lethal infection in certain species of wild birds, including some endangered species. Raptors are susceptible to avian influenza, and spatial risk assessment of such species may be valuable for conservation planning. We used the maximum entropy approach to generate potential distribution models of three raptor species from presence-only data for the mountain hawk-eagle Nisaetus nipalensis, northern goshawk Accipiter gentilis and peregrine falcon Falco peregrinus, surveyed during the winter from 1996 to 2001. These potential distribution maps for raptors were superimposed on avian influenza A risk maps of Japan, created from data on incidence of the virus in wild birds throughout Japan from October 2010 to March 2011. The avian influenza A risk map for the mountain hawk-eagle showed that most regions of Japan had a low risk for avian influenza A. In contrast, the maps for the northern goshawk and peregrine falcon showed that their high-risk areas were distributed on the plains along the Sea of Japan and Pacific coast. We recommend enhanced surveillance for each raptor species in high-risk areas and immediate establishment of inspection systems. At the same time, ecological risk assessments that determine factors, such as the composition of prey species, and differential sensitivity of avian influenza A virus between bird species should provide multifaceted insights into the total risk assessment of endangered species. PMID:26972333

Ornamental marine species culture in the coral triangle: seahorse demonstration project in the Spermonde Islands, Sulawesi, Indonesia.

PubMed

Williams, Susan L; Janetski, Noel; Abbott, Jessica; Blankenhorn, Sven; Cheng, Brian; Crafton, R Eliot; Hameed, Sarah O; Rapi, Saipul; Trockel, Dale

2014-12-01

Ornamental marine species ('OMS') provide valuable income for developing nations in the Indo-Pacific Coral Triangle, from which most of the specimens are exported. OMS culture can help diversify livelihoods in the region, in support of management and conservation efforts to reduce destructive fishing and collection practices that threaten coral reef and seagrass ecosystems. Adoption of OMS culture depends on demonstrating its success as a livelihood, yet few studies of OMS culture exist in the region. We present a case study of a land-based culture project for an endangered seahorse (Hippocampus barbouri) in the Spermonde Islands, Sulawesi, Indonesia. The business model demonstrated that culturing can increase family income by seven times. A Strengths Weaknesses Opportunities Threats (SWOT) analysis indicated good collaboration among diverse stakeholders and opportunities for culturing non-endangered species and for offshoot projects, but complicated permitting was an issue as were threats of market flooding and production declines. The OMS international market is strong, Indonesian exporters expressed great interest in cultured product, and Indonesia is the largest exporting country for H. barbouri. Yet, a comparison of Indonesia ornamental marine fish exports to fish abundance in a single local market indicated that OMS culture cannot replace fishing livelihoods. Nevertheless, seahorse and other OMS culture can play a role in management and conservation by supplementing and diversifying the fishing and collecting livelihoods in the developing nations that provide the majority of the global OMS.

Ornamental Marine Species Culture in the Coral Triangle: Seahorse Demonstration Project in the Spermonde Islands, Sulawesi, Indonesia

NASA Astrophysics Data System (ADS)

Williams, Susan L.; Janetski, Noel; Abbott, Jessica; Blankenhorn, Sven; Cheng, Brian; Crafton, R. Eliot; Hameed, Sarah O.; Rapi, Saipul; Trockel, Dale

2014-12-01

Ornamental marine species (`OMS') provide valuable income for developing nations in the Indo-Pacific Coral Triangle, from which most of the specimens are exported. OMS culture can help diversify livelihoods in the region, in support of management and conservation efforts to reduce destructive fishing and collection practices that threaten coral reef and seagrass ecosystems. Adoption of OMS culture depends on demonstrating its success as a livelihood, yet few studies of OMS culture exist in the region. We present a case study of a land-based culture project for an endangered seahorse ( Hippocampus barbouri) in the Spermonde Islands, Sulawesi, Indonesia. The business model demonstrated that culturing can increase family income by seven times. A Strengths Weaknesses Opportunities Threats (SWOT) analysis indicated good collaboration among diverse stakeholders and opportunities for culturing non-endangered species and for offshoot projects, but complicated permitting was an issue as were threats of market flooding and production declines. The OMS international market is strong, Indonesian exporters expressed great interest in cultured product, and Indonesia is the largest exporting country for H. barbouri. Yet, a comparison of Indonesia ornamental marine fish exports to fish abundance in a single local market indicated that OMS culture cannot replace fishing livelihoods. Nevertheless, seahorse and other OMS culture can play a role in management and conservation by supplementing and diversifying the fishing and collecting livelihoods in the developing nations that provide the majority of the global OMS.

Brucellosis in Endangered Hector's Dolphins (Cephalorhynchus hectori).

PubMed

Buckle, Kelly; Roe, Wendi D; Howe, Laryssa; Michael, Sarah; Duignan, Padraig J; Burrows, E; Ha, Hye Jeong; Humphrey, Sharon; McDonald, Wendy L

2017-09-01

Brucella spp infections of marine mammals are often asymptomatic but have been associated with reproductive losses and deaths. Zoonotic infections originating from marine isolates have also been described. Hector's dolphins (Cephalorhynchus hectori) are an endangered species with a declining population, and the role of infectious disease in population dynamics is not fully understood. In this study, 27 Hector's dolphins found dead around the New Zealand coastline between November 2006 and October 2010 were evaluated for lesions previously associated with cetacean brucellosis. Tissues were examined using histological, immunohistochemical, and molecular (polymerase chain reaction [PCR]) techniques. Seven of 27 dolphins (26%) had at least 1 tissue that was positive on PCR for Brucella spp. Lesions consistent with brucellosis were present in 10 of 27 (37%) dolphins, but in 8 of these dolphins Brucella infection could not be demonstrated in lesional tissues. Two dolphins (7%) were diagnosed with active brucellosis: 1 female with placentitis and metritis, and 1 stillborn male fetus. Brucella identified in these 2 dolphins had genetic similarity (99%) to Brucella pinnipedialis. The omp2a gene amplicon from the uterus of the female had 100% homology with ST27 genotype isolates from a human in New Zealand and a bottlenose dolphin of Pacific origin. The remaining 5 PCR-positive dolphins were assessed as having asymptomatic or latent infection. While most Brucella infections identified in this study appeared to be subclinical, the finding of 2 dolphins with reproductive disease due to Brucella infection suggests that this disease has the potential to affect reproductive success in this species.

76 FR 49412 - Endangered and Threatened Wildlife; 90-Day Finding on a Petition To List the Saltmarsh Topminnow...

Federal Register 2010, 2011, 2012, 2013, 2014

2011-08-10

... Threatened or Endangered Under the Endangered Species Act AGENCY: National Marine Fisheries Service (NMFS... endangered under the Endangered Species Act (ESA). We find that the petition presents substantial scientific.... Endangered Species Act'' because NatureServe assessments ``have different criteria, evidence requirements...

78 FR 57749 - Endangered and Threatened Wildlife and Plants; Determination of Endangered Species Status for...

Federal Register 2010, 2011, 2012, 2013, 2014

2013-09-19

... Service 50 CFR Part 17 Endangered and Threatened Wildlife and Plants; Determination of Endangered Species... Endangered and Threatened Wildlife and Plants; Determination of Endangered Species Status for Mount... determination on our proposal within 1 year. Critical habitat shall be designated, to the maximum extent prudent...

'Is Ash Falling?', an online ashfall reporting tool in support of improved ashfall warnings and investigations of ashfall processes

USGS Publications Warehouse

Wallace, Kristi; Snedigar, Seth; Cameron, Cheryl

2015-01-01

The primary volcano hazard in Alaska is airborne ash, which endangers aircraft flying the busy North Pacific air routes and consequently affects global commerce. Downwind ashfall is also a significant threat to commerce, transportation and day-to-day activities in nearby Alaska communities. A web-enabled database, "Is Ash Falling?" has been developed to collect ashfall observations and encourage sample collections from the public during eruptions, enabling volcano observatory staff to concentrate on eruption response. Knowing the locations of filed ashfall reports improves public ashfall warnings and forecasts by providing on-the-ground checks for ash dispersion and fallout computer models and satellite imagery interpretation. Reports of ashfall are shared with emergency management agencies and the wider public. These reports also give scientists a more complete record of the amount, duration and other conditions of ashfall.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Johnson, Gary E.; Sather, Nichole K.

This project covers facilitation of the Estuary/Ocean Subgroup (EOS) for federal research, monitoring, and evaluation (RME) and the Expert Regional Technical Group (ERTG) for estuary habitat restoration. The EOS is part of the research, monitoring, and evaluation effort that the Action Agencies (Bonneville Power Administration [BPA], U.S. Army Corps of Engineers [Corps], U.S. Bureau of Reclamation) developed in response to obligations arising from the Endangered Species Act as applied to operation of the Federal Columbia River Power System (FCRPS). The EOS is tasked by National Marine Fisheries Service (NMFS) and the Action Agencies (AAs) to design and coordinate implementation ofmore » the federal RME plan for the lower Columbia River and estuary, including the river’s plume in the ocean. Initiated in 2002, the EOS is composed of members from BPA, the Corps, NMFS, and Pacific Northwest National Laboratory’s (PNNL’s) Marine Sciences Laboratory, and other agencies as necessary.« less

DNA Barcodes Confirm the Taxonomic and Conservation Status of a Species of Tree on the Brink of Extinction in the Pacific.

PubMed

Costion, Craig M; Kress, W John; Crayn, Darren M

2016-01-01

The taxonomic status of a single island, narrow range endemic plant species from Palau, Micronesia (Timonius salsedoi) was assessed using DNA barcode markers, additional plastid loci, and morphology in order to verify its conservation status. DNA barcode loci distinguished T. salsedoi from all other Timonius species sampled from Palau, and were supported by sequence data from the atpB-rbcL intergenic spacer region. Timonius salsedoi was only known from two mature individual trees in 2012. Due to its extremely narrow range and population size, it had previously been recommended to be listed as Critically Endangered Status under three separate IUCN Criteria. In 2014 a second survey of the population following a typhoon revealed that the only two known trees had died suggesting that this species may now be extinct. Comprehensive follow up surveys of suitable habitat for this species are urgently required.

State propaganda and mental disorders: the issue of psychiatric casualties among Japanese soldiers during the Asia-Pacific War.

PubMed

Matsumura, Janice

2004-01-01

This article explores the politics of Japanese wartime medical policy, demonstrating how state propaganda about the people and their armed forces influenced authoritative views on health and what might endanger it. By focusing on the obstacles faced by psychiatrists trying to promote more official concern for mental health issues, it challenges the validity of figures indicating a low incidence of psychological trauma among the country's soldiers. Civilian psychiatrists had to contend with the threat of censorship and arrest for even discussing war-induced mental disorders; at the same time, army psychiatrists as military insiders were pressured to convince their patients that their conditions were not serious and did not merit compensation. While discussing the neglected topic of Japanese psychiatric casualties, an attempt is made to provide a comparative approach by referring to the state of military psychiatry in other national settings.

Bird remains from an archaeological site on Henderson Island, South Pacific: Man-caused extinctions on an “uninhabited” island

PubMed Central

Steadman, David W.; Olson, Storrs L.

1985-01-01

Long thought never to have been inhabited and to be in a pristine ecological state, Henderson Island (southeast Pacific) is now known to have been colonized and then abandoned by Polynesians. Bones from an archaeological site on the island associated with 14C dates of ≈800 and ≈500 years B.P. include specimens of 12 species of birds, of which 3, a storm-petrel and two pigeons (Nesofregetta fuliginosa, Ducula cf. aurorae or D. pacifica, and Ducula cf. galeata), no longer occur on Henderson, and two others (Puffinus nativitatis and Sula sula) still visit but are not known to breed. The vanished species were presumably exterminated by Polynesians and the biota of Henderson Island can thus no longer be regarded as being in an unaltered state. The prehistoric abandonment of various small, unarable islands by Polynesians may have been due to the depletion of seabirds and pigeons, the only readily available food source. The species of pigeons identified from Henderson are known historically only from distant archipelagos and have never before been found sympatrically. Distributional patterns resulting from man-caused extinctions may give rise to erroneous interpretations of the relationships and evolutionary history of insular organisms. Certain endangered species, such as Ducula galeata, might effectively be preserved by reintroduction to abandoned islands that they occupied before human intervention. Images PMID:16593606

Evidence from cytochrome b sequences and allozymes for a new species of alcid: The long-billed murrelet (Brachyramphus perdix)

USGS Publications Warehouse

Friesen, Vicki L.; Piatt, John F.; Baker, Allan J.

1996-01-01

Marbled Murrelets (Brachyramphus marmoratus) are coastal seabirds that breed predominantly in old-growth forest throughout the North Pacific. Presently they are classified into two phenotypically distinct subspecies: one in North America (B. m. marmoratus) and one in Asia (B. m. perdix). The Asian form was classified as a separate species in 1811, but was lumped with B. marmoratus during the 20th century. Populations of both types are considered threatened or endangered and information about the extent of genetic differentiation among birds from different sites is required for their conservation. We compared variation in 1,045 base pairs of the mitochondrial cytochrome b gene and 39 allozyme loci among Marbled Murrelets and the closely related Kittlitz's Murrelets (B. brevirostris) from throughout the North Pacific. All analyses indicted that North American and Asian Marbled Murrelets are genetically distinct: cytochrome b sequences were highly divergent, fixed allele differences occurred at two allozyme loci, and estimated gene flow was essentially zero. Phylogenetic analyses of cytochrome b sequences and allozymes both provided strong support for a monophyletic relationship among North American Marbled Murrelets and Kittlitz's Murrelets, with Long-billed Murrelets forming the basal lineage. Long-billed and North American Marbled Murrelets clearly represent distinct species by any definition, and must be managed independently. Significant genetic differentiation also was found among both Marbled and Kittlitz's Murrelets from different sites within North America.

Density and population viability of coastal marten: a rare and geographically isolated small carnivore

PubMed Central

Green, David S.; Levi, Taal

2018-01-01

Pacific martens (Martes caurina humboldtensis) in coastal forests of Oregon and northern California in the United States are rare and geographically isolated, prompting a petition for listing under the Endangered Species Act. If listed, regulations have the potential to influence land-use decisions on public and private lands, but no estimates of population size, density, or viability of remnant marten populations are available for evaluating their conservation status. We used GPS and VHF telemetry and spatial mark-resight to estimate home ranges, density, and population size of Pacific martens in the Oregon Dunes National Recreation Area, central coast Oregon, USA. We then estimated population viability at differing levels of human-caused mortality (e.g., vehicle mortality). Marten home ranges were small on average (females = 0.8 km2, males 1.5 km2) and density (1.13 martens/1 km2) was the highest reported for North American populations (M. caurina, M. americana). We estimated 71 adult martens (95% CRI [41–87]) across two subpopulations separated by a large barrier (Umpqua River). Using population viability analysis, extinction risk for a subpopulation of 30 martens, approximately the size of the subpopulation south of the Umpqua River, ranged from 32% to 99% with two or three annual human-caused mortalities within 30 years. Absent population expansion, limiting human-caused mortalities will likely have the greatest conservation impact. PMID:29637018

77 FR 22749 - Petition To List 83 Species of Coral as Threatened or Endangered Under the Endangered Species Act...

Federal Register 2010, 2011, 2012, 2013, 2014

2012-04-17

... threatened or endangered under the Endangered Species Act (ESA) and to notify the public about future public... Candidate Coral Species Petitioned Under the U.S. Endangered Species Act (Status Review Report) and the draft Management Report for 82 Corals Status Review under the Endangered Species Act: Assessment of...

78 FR 6299 - Endangered and Threatened Wildlife; 90-Day Finding on Two Petitions To List White Marlin as...

Federal Register 2010, 2011, 2012, 2013, 2014

2013-01-30

... Marlin as Threatened or Endangered Under the Endangered Species Act AGENCY: National Marine Fisheries... white marlin (Kajikia albidus) as threatened or endangered under the Endangered Species Act (ESA). We... do ``not constitute a recommendation by NatureServe for listing under the U.S. Endangered Species Act...

78 FR 57076 - Endangered and Threatened Wildlife and Plants; Endangered Status for the Neosho Mucket and...

Federal Register 2010, 2011, 2012, 2013, 2014

2013-09-17

...-0031; 4500030113] RIN 1018-AX73 Endangered and Threatened Wildlife and Plants; Endangered Status for... requires that we identify species of wildlife and plants that are endangered or threatened based on the... they should be added to the Federal Lists of Endangered and Threatened Wildlife and Plants. The listing...

Recent population size, trends, and limiting factors for the double-crested Cormorant in Western North America

USGS Publications Warehouse

Adkins, Jessica Y.; Roby, Daniel D.; Lyons, Donald E.; Courtot, Karen N.; Collis, Ken; Carter, Harry R.; Shuford, W. David; Capitolo, Phillip J.

2014-01-01

The status of the double-crested cormorant (Phalacrocorax auritus) in western North America was last evaluated during 1987–2003. In the interim, concern has grown over the potential impact of predation by double-crested cormorants on juvenile salmonids (Oncorhynchusspp.), particularly in the Columbia Basin and along the Pacific coast where some salmonids are listed for protection under the United States Endangered Species Act. Recent re-evaluations of double-crested cormorant management at the local, flyway, and federal level warrant further examination of the current population size and trends in western North America. We collected colony size data for the western population (British Columbia, Washington, Oregon, Idaho, California, Nevada, Utah, Arizona, and the portions of Montana, Wyoming, Colorado and New Mexico west of the Continental Divide) by conducting aircraft-, boat-, or ground-based surveys and by cooperating with government agencies, universities, and non-profit organizations. In 2009, we estimated approximately 31,200 breeding pairs in the western population. We estimated that cormorant numbers in the Pacific Region (British Columbia, Washington, Oregon, and California) increased 72% from 1987–1992 to circa 2009. Based on the best available data for this period, the average annual growth rate (λ) of the number of breeding birds in the Pacific Region was 1.03, versus 1.07 for the population east of the Continental Divide during recent decades. Most of the increase in the Pacific Region can be attributed to an increase in the size of the nesting colony on East Sand Island in the Columbia River estuary, which accounts for about 39% of all breeding pairs in the western population and is the largest known breeding colony for the species (12,087 breeding pairs estimated in 2009). In contrast, numbers of breeding pairs estimated in coastal British Columbia and Washington have declined by approximately 66% during this same period. Disturbance at breeding colonies by bald eagles (Haliaeetus leucocephalus) and humans are likely limiting factors on the growth of the western population at present. Because of differences in biology and management, the western population of double-crested cormorants warrants consideration as a separate management unit from the population east of the Continental Divide.

77 FR 61559 - Endangered and Threatened Wildlife; 90-Day Finding on a Petition To List Nassau Grouper as...

Federal Register 2010, 2011, 2012, 2013, 2014

2012-10-10

... Petition To List Nassau Grouper as Threatened or Endangered Under the Endangered Species Act AGENCY... endangered under the Endangered Species Act (ESA). We find that the petition presents substantial scientific... the Endangered Species Act of 1973, as amended (16 U.S.C. 1531 et seq.). Dated: October 2, 2012. Alan...

50 CFR 451.03 - Endangered Species Committee.

Code of Federal Regulations, 2011 CFR

2011-10-01

... 50 Wildlife and Fisheries 9 2011-10-01 2011-10-01 false Endangered Species Committee. 451.03... ADMINISTRATION, DEPARTMENT OF COMMERCE); ENDANGERED SPECIES COMMITTEE REGULATIONS ENDANGERED SPECIES EXEMPTION PROCESS APPLICATION PROCEDURE § 451.03 Endangered Species Committee. (a) Scope. This section contains...

50 CFR 451.03 - Endangered Species Committee.

Code of Federal Regulations, 2010 CFR

2010-10-01

... 50 Wildlife and Fisheries 7 2010-10-01 2010-10-01 false Endangered Species Committee. 451.03... ADMINISTRATION, DEPARTMENT OF COMMERCE); ENDANGERED SPECIES COMMITTEE REGULATIONS ENDANGERED SPECIES EXEMPTION PROCESS APPLICATION PROCEDURE § 451.03 Endangered Species Committee. (a) Scope. This section contains...

50 CFR 451.03 - Endangered Species Committee.

Code of Federal Regulations, 2012 CFR

2012-10-01

... 50 Wildlife and Fisheries 11 2012-10-01 2012-10-01 false Endangered Species Committee. 451.03... ADMINISTRATION, DEPARTMENT OF COMMERCE); ENDANGERED SPECIES COMMITTEE REGULATIONS ENDANGERED SPECIES EXEMPTION PROCESS APPLICATION PROCEDURE § 451.03 Endangered Species Committee. (a) Scope. This section contains...

50 CFR 451.03 - Endangered Species Committee.

Code of Federal Regulations, 2014 CFR

2014-10-01

... 50 Wildlife and Fisheries 11 2014-10-01 2014-10-01 false Endangered Species Committee. 451.03... ADMINISTRATION, DEPARTMENT OF COMMERCE); ENDANGERED SPECIES COMMITTEE REGULATIONS ENDANGERED SPECIES EXEMPTION PROCESS APPLICATION PROCEDURE § 451.03 Endangered Species Committee. (a) Scope. This section contains...

50 CFR 451.03 - Endangered Species Committee.

Code of Federal Regulations, 2013 CFR

2013-10-01

... 50 Wildlife and Fisheries 11 2013-10-01 2013-10-01 false Endangered Species Committee. 451.03... ADMINISTRATION, DEPARTMENT OF COMMERCE); ENDANGERED SPECIES COMMITTEE REGULATIONS ENDANGERED SPECIES EXEMPTION PROCESS APPLICATION PROCEDURE § 451.03 Endangered Species Committee. (a) Scope. This section contains...

50 CFR 453.01 - Purpose.

Code of Federal Regulations, 2012 CFR

2012-10-01

... COMMERCE); ENDANGERED SPECIES COMMITTEE REGULATIONS ENDANGERED SPECIES EXEMPTION PROCESS ENDANGERED SPECIES COMMITTEE § 453.01 Purpose. This part prescribes the procedures to be used by the Endangered Species Committee when examining applications for exemption from section 7(a)(2) of the Endangered Species Act of...

50 CFR 453.01 - Purpose.

Code of Federal Regulations, 2011 CFR

2011-10-01

... COMMERCE); ENDANGERED SPECIES COMMITTEE REGULATIONS ENDANGERED SPECIES EXEMPTION PROCESS ENDANGERED SPECIES COMMITTEE § 453.01 Purpose. This part prescribes the procedures to be used by the Endangered Species Committee when examining applications for exemption from section 7(a)(2) of the Endangered Species Act of...

50 CFR 453.01 - Purpose.

Code of Federal Regulations, 2014 CFR

2014-10-01

... COMMERCE); ENDANGERED SPECIES COMMITTEE REGULATIONS ENDANGERED SPECIES EXEMPTION PROCESS ENDANGERED SPECIES COMMITTEE § 453.01 Purpose. This part prescribes the procedures to be used by the Endangered Species Committee when examining applications for exemption from section 7(a)(2) of the Endangered Species Act of...

50 CFR 453.01 - Purpose.

Code of Federal Regulations, 2010 CFR

2010-10-01

... COMMERCE); ENDANGERED SPECIES COMMITTEE REGULATIONS ENDANGERED SPECIES EXEMPTION PROCESS ENDANGERED SPECIES COMMITTEE § 453.01 Purpose. This part prescribes the procedures to be used by the Endangered Species Committee when examining applications for exemption from section 7(a)(2) of the Endangered Species Act of...

50 CFR 453.01 - Purpose.

Code of Federal Regulations, 2013 CFR

2013-10-01

... COMMERCE); ENDANGERED SPECIES COMMITTEE REGULATIONS ENDANGERED SPECIES EXEMPTION PROCESS ENDANGERED SPECIES COMMITTEE § 453.01 Purpose. This part prescribes the procedures to be used by the Endangered Species Committee when examining applications for exemption from section 7(a)(2) of the Endangered Species Act of...

75 FR 69699 - Endangered Species Recovery Permit Applications

Federal Register 2010, 2011, 2012, 2013, 2014

2010-11-15

...] Endangered Species Recovery Permit Applications AGENCY: Fish and Wildlife Service, Interior. ACTION: Notice... endangered species. With some exceptions, the Endangered Species Act (Act) prohibits activities with endangered and threatened species unless a Federal permit allows such activity. The Act also requires that we...

50 CFR 450.01 - Definitions

Code of Federal Regulations, 2013 CFR

2013-10-01

... OF COMMERCE); ENDANGERED SPECIES COMMITTEE REGULATIONS ENDANGERED SPECIES EXEMPTION PROCESS GENERAL... the Endangered Species Act of 1973, as amended, 16 U.S.C. 1531, et seq. Agency action means all... Endangered Species Committee, who is the Secretary of the Interior. Committee means the Endangered Species...

77 FR 12611 - Endangered Species Recovery Permit Applications

Federal Register 2010, 2011, 2012, 2013, 2014

2012-03-01

...-FF08E00000] Endangered Species Recovery Permit Applications AGENCY: Fish and Wildlife Service, Interior... with endangered species. With some exceptions, the Endangered Species Act (Act) prohibits activities with endangered and threatened species unless a Federal permit allows such activity. The Act also...

75 FR 53708 - Endangered Species Recovery Permit Applications

Federal Register 2010, 2011, 2012, 2013, 2014

2010-09-01

...] Endangered Species Recovery Permit Applications AGENCY: Fish and Wildlife Service, Interior. ACTION: Notice... endangered species. With some exceptions, the Endangered Species Act (Act) prohibits activities with endangered and threatened species unless a Federal permit allows such activity. The Act also requires that we...

50 CFR 450.01 - Definitions

Code of Federal Regulations, 2012 CFR

2012-10-01

... OF COMMERCE); ENDANGERED SPECIES COMMITTEE REGULATIONS ENDANGERED SPECIES EXEMPTION PROCESS GENERAL... the Endangered Species Act of 1973, as amended, 16 U.S.C. 1531, et seq. Agency action means all... Endangered Species Committee, who is the Secretary of the Interior. Committee means the Endangered Species...

50 CFR 450.01 - Definitions

Code of Federal Regulations, 2014 CFR

2014-10-01

... OF COMMERCE); ENDANGERED SPECIES COMMITTEE REGULATIONS ENDANGERED SPECIES EXEMPTION PROCESS GENERAL... the Endangered Species Act of 1973, as amended, 16 U.S.C. 1531, et seq. Agency action means all... Endangered Species Committee, who is the Secretary of the Interior. Committee means the Endangered Species...

78 FR 57410 - Endangered Species; Issuance of Permits

Federal Register 2010, 2011, 2012, 2013, 2014

2013-09-18

... permits to conduct certain activities with endangered species under the authority of the Endangered Species Act, as amended (Act). ADDRESSES: Endangered Species Program Manager, Ecological Services, U.S...-FF01E00000] Endangered Species; Issuance of Permits AGENCY: Fish and Wildlife Service, Interior. ACTION...

76 FR 39432 - Endangered Species; Receipt of Applications for Permit

Federal Register 2010, 2011, 2012, 2013, 2014

2011-07-06

... conduct certain activities with endangered species. With some exceptions, the Endangered Species Act (ESA...] Endangered Species; Receipt of Applications for Permit AGENCY: Fish and Wildlife Service, Interior. ACTION.... Background To help us carry out our conservation responsibilities for affected species, the Endangered...

50 CFR 450.01 - Definitions

Code of Federal Regulations, 2011 CFR

2011-10-01

... COMMERCE); ENDANGERED SPECIES COMMITTEE REGULATIONS ENDANGERED SPECIES EXEMPTION PROCESS GENERAL PROVISIONS... Endangered Species Act of 1973, as amended, 16 U.S.C. 1531, et seq. Agency action means all actions of any... Endangered Species Committee, who is the Secretary of the Interior. Committee means the Endangered Species...

50 CFR 450.01 - Definitions

Code of Federal Regulations, 2010 CFR

2010-10-01

... COMMERCE); ENDANGERED SPECIES COMMITTEE REGULATIONS ENDANGERED SPECIES EXEMPTION PROCESS GENERAL PROVISIONS... Endangered Species Act of 1973, as amended, 16 U.S.C. 1531, et seq. Agency action means all actions of any... Endangered Species Committee, who is the Secretary of the Interior. Committee means the Endangered Species...

Forecasting the viability of sea turtle eggs in a warming world.

PubMed

Pike, David A

2014-01-01

Animals living in tropical regions may be at increased risk from climate change because current temperatures at these locations already approach critical physiological thresholds. Relatively small temperature increases could cause animals to exceed these thresholds more often, resulting in substantial fitness costs or even death. Oviparous species could be especially vulnerable because the maximum thermal tolerances of incubating embryos is often lower than adult counterparts, and in many species mothers abandon the eggs after oviposition, rendering them immobile and thus unable to avoid extreme temperatures. As a consequence, the effects of climate change might become evident earlier and be more devastating for hatchling production in the tropics. Loggerhead sea turtles (Caretta caretta) have the widest nesting range of any living reptile, spanning temperate to tropical latitudes in both hemispheres. Currently, loggerhead sea turtle populations in the tropics produce nearly 30% fewer hatchlings per nest than temperate populations. Strong correlations between empirical hatching success and habitat quality allowed global predictions of the spatiotemporal impacts of climate change on this fitness trait. Under climate change, many sea turtle populations nesting in tropical environments are predicted to experience severe reductions in hatchling production, whereas hatching success in many temperate populations could remain unchanged or even increase with rising temperatures. Some populations could show very complex responses to climate change, with higher relative hatchling production as temperatures begin to increase, followed by declines as critical physiological thresholds are exceeded more frequently. Predicting when, where, and how climate change could impact the reproductive output of local populations is crucial for anticipating how a warming world will influence population size, growth, and stability.

Female-Bias in a Long-Term Study of a Species with Temperature-Dependent Sex Determination: Monitoring Sex Ratios for Climate Change Research.

PubMed

Braun McNeill, Joanne; Avens, Larisa; Goodman Hall, April; Goshe, Lisa R; Harms, Craig A; Owens, David W

2016-01-01

Alterations have occurred and continue to manifest in the Earth's biota as a result of climate change. Animals exhibiting temperature dependent sex determination (TSD), including sea turtles, are perhaps most vulnerable to a warming of the Earth as highly skewed sex ratios can result, potentially leading to population extinction resulting from decreased male recruitment. Recent studies have begun to quantify climate change impacts to sea turtle populations, especially in terms of predicting effects on hatchling sex ratios. However, given the inherent difficulty in studying sex ratios at this life stage, a more accurate assessment of changes in population sex ratios might be derived by evaluating the juvenile portion of foraging aggregations. We investigated the long-term trend in sex ratio of a juvenile loggerhead (Caretta caretta) sea turtle population inhabiting Pamlico and Core Sounds, North Carolina, USA. We used plasma testosterone reference ranges measured using radioimmunoassay (RIA) to assign sex for 959 turtles and confirmed sex assignment of a subset (N = 58) of the sampled turtles through laparoscopic examination of their gonads. Our results demonstrate that for this particular population of loggerheads, sex ratios (3Females:1Male) had not significantly changed over a 10 year period (1998-2007), nor showed any significant difference among 5-cm straight carapace length (SCL) size classes. Ultimately, these findings provide a basis for comparison with future sex ratios, and highlight the importance of establishing similar long-term studies monitoring secondary, rather than primary, sex ratios, so that needed mitigation measures to climate change impacts can be implemented.

Evidence for geomagnetic imprinting and magnetic navigation in the natal homing of sea turtles.

PubMed

Brothers, J Roger; Lohmann, Kenneth J

2015-02-02

Natal homing is a pattern of behavior in which animals migrate away from their geographic area of origin and then return to reproduce in the same location where they began life [1-3]. Although diverse long-distance migrants accomplish natal homing [1-8], little is known about how they do so. The enigma is epitomized by loggerhead sea turtles (Caretta caretta), which leave their home beaches as hatchlings and migrate across entire ocean basins before returning to nest in the same coastal area where they originated [9, 10]. One hypothesis is that turtles imprint on the unique geomagnetic signature of their natal area and use this information to return [1]. Because Earth's field changes over time, geomagnetic imprinting should cause turtles to change their nesting locations as magnetic signatures drift slightly along coastlines. To investigate, we analyzed a 19-year database of loggerhead nesting sites in the largest sea turtle rookery in North America. Here we report a strong association between the spatial distribution of turtle nests and subtle changes in Earth's magnetic field. Nesting density increased significantly in coastal areas where magnetic signatures of adjacent beach locations converged over time, whereas nesting density decreased in places where magnetic signatures diverged. These findings confirm central predictions of the geomagnetic imprinting hypothesis and provide strong evidence that such imprinting plays an important role in natal homing in sea turtles. The results give credence to initial reports of geomagnetic imprinting in salmon [11, 12] and suggest that similar mechanisms might underlie long-distance natal homing in diverse animals. Copyright © 2015 Elsevier Ltd. All rights reserved.

Seasonal changes in serum gonadal steroids associated with migration, mating, and nesting in the loggerhead sea turtle (Caretta caretta).

PubMed

Wibbels, T; Owens, D W; Limpus, C J; Reed, P C; Amoss, M S

1990-07-01

Adult male loggerhead sea turtles, Caretta caretta, exhibited a "prenuptial" spermatogenic cycle that was coincident with increased concentrations of serum testosterone (T). Serum T was high during the months when migration and mating have been recorded for males. In contrast to females, males appear to be annual breeders. Nine reproductively active female C. caretta (as verified through laparoscopy) were tagged with sonic transmitters and were repeatedly bled prior to migration. Four months prior to the nesting season, the ovaries of reproductively active females had hundreds of vitellogenic follicles of approximately 1.5 cm in diameter (i.e., half the size of ovulatory follicles). Approximately 4-6 weeks prior to migration from feeding grounds to mating and nesting areas, serum estradiol-17 beta (E2) concentrations increased significantly and remained high for approximately 4 weeks, suggesting a period of increased vitellogenesis. During a 1- to 2-week period prior to migration, serum E2 decreased significantly, while serum T concentrations increased (at least) until the time of migration. Serum T, E2, and progesterone (PRO) were elevated during nesting if a turtle was going to nest again during that nesting season. During the last nesting of a season, turtles had low serum concentrations of T, E2, and Pro. The prenuptial pattern of gonadal recrudescence and gonadal steroid production in both male and female C. caretta contrasts with those of many temperate freshwater turtles, and this type of reproductive pattern may have been facilitated by adaptation to a tropical marine environment.

Investigating the potential impact of polycyclic aromatic hydrocarbons (PAHs) and polychlorinated biphenyls (PCBs) on gene biomarker expression and global DNA methylation in loggerhead sea turtles (Caretta caretta) from the Adriatic Sea.

PubMed

Cocci, Paolo; Mosconi, Gilberto; Bracchetti, Luca; Nalocca, John Mark; Frapiccini, Emanuela; Marini, Mauro; Caprioli, Giovanni; Sagratini, Gianni; Palermo, Francesco Alessandro

2018-04-01

Polycyclic aromatic hydrocarbons (PAHs) and polychlorinated biphenyls (PCBs) are priority contaminants that bioaccumulate through the food webs and affect the biology of a variety of resident and migratory species, including sea turtles. Few studies have evaluated toxicological biomarkers of exposure to PAHs and PCBs in these animals. The present paper reports the results of an initial field study to quantify the association between plasma concentrations of PAHs/PCBs and whole blood cell expression of gene biomarkers in juvenile loggerhead sea turtles (Caretta caretta) rescued along the Italian coasts of the northern and central areas of the Adriatic Sea. While detectable levels of PAHs were found in all plasma samples examined, only three PCB congeners (PCB52, PCB95, and PCB149) were noted, with detection percentages ranging between 48% and 57%. A significant correlation was found between 3 of the 6 gene biomarkers assessed (HSP60, CYP1A and ERα) and plasma levels of some PAH congeners. In contrast, no significant association between PCB burden and gene expression was observed. The global DNA methylation levels were significantly and positively correlated with the concentrations of most of the PAHs and only one of the PCB congeners (PCB52). The relation between PAH concentration and gene expression in whole blood cells suggests that these genes may respond to environmental contaminant exposure and are promising candidates for the development of biomarkers for monitoring sea turtle exposure to persistent organic pollutants (POPs). Copyright © 2017 Elsevier B.V. All rights reserved.

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77 FR 6138 - Draft Policy on Interpretation of the Phrase “Significant Portion of Its Range” in the Endangered...

Federal Register 2010, 2011, 2012, 2013, 2014

2012-02-07

... Portion of Its Range'' in the Endangered Species Act's Definitions of ``Endangered Species'' and... interpreting the phrase ``significant portion of its range'' in the Endangered Species Act's (Act's...'' in the Act's definitions of ``endangered species'' and ``threatened species'' will consider...

76 FR 74070 - Endangered and Threatened Species; Permits

Federal Register 2010, 2011, 2012, 2013, 2014

2011-11-30

... Endangered Species Act of 1973, as amended (16 U.S.C. 1531 et seq.). Dated: November 21, 2011. Lynn M. Lewis...-FF03E00000] Endangered and Threatened Species; Permits AGENCY: Fish and Wildlife Service, Interior. ACTION... permits to conduct certain activities with endangered species under the authority of the Endangered...

77 FR 20838 - Endangered Species; Receipt of Applications for Permits

Federal Register 2010, 2011, 2012, 2013, 2014

2012-04-06

... endangered species. With some exceptions, the Endangered Species Act (ESA) prohibits activities with listed... responsibilities for affected species, and in consideration of section 10(a)(1)(A) of the Endangered Species Act of...-FF09A30000] Endangered Species; Receipt of Applications for Permits AGENCY: Fish and Wildlife Service...

78 FR 56924 - Endangered Species; Receipt of Applications for Permit

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2013-09-16

... endangered species. With some exceptions, the Endangered Species Act (ESA) prohibits activities with listed... responsibilities for affected species, and in consideration of section 10(a)(1)(A) of the Endangered Species Act of...-FF09A30000] Endangered Species; Receipt of Applications for Permit AGENCY: Fish and Wildlife Service...

77 FR 59961 - Endangered Species; Receipt of Applications for Permit

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2012-10-01

... endangered species. With some exceptions, the Endangered Species Act (ESA) prohibits activities with listed... affected species, and in consideration of section 10(a)(1)(A) of the Endangered Species Act of 1973, as...-FF09A30000] Endangered Species; Receipt of Applications for Permit AGENCY: Fish and Wildlife Service...

78 FR 59052 - Endangered Species; Receipt of Applications for Permit

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2013-09-25

... endangered species. With some exceptions, the Endangered Species Act (ESA) prohibits activities with listed... responsibilities for affected species, and in consideration of section 10(a)(1)(A) of the Endangered Species Act of...-FF09A30000] Endangered Species; Receipt of Applications for Permit AGENCY: Fish and Wildlife Service...

76 FR 51051 - Endangered Species; Receipt of Applications for Permit

Federal Register 2010, 2011, 2012, 2013, 2014

2011-08-17

... endangered species. With some exceptions, the Endangered Species Act (ESA) prohibits activities with listed...) of the Endangered Species Act of 1973, as amended (16 U.S.C. 1531 et seq.), and our regulations in...] Endangered Species; Receipt of Applications for Permit AGENCY: Fish and Wildlife Service, Interior. [[Page...

Identifying appropriate protected areas for endangered fern species under climate change.

PubMed

Wang, Chun-Jing; Wan, Ji-Zhong; Zhang, Zhi-Xiang; Zhang, Gang-Min

2016-01-01

The management of protected areas (PAs) is widely used in the conservation of endangered plant species under climate change. However, studies that have identified appropriate PAs for endangered fern species are rare. To address this gap, we must develop a workflow to plan appropriate PAs for endangered fern species that will be further impacted by climate change. Here, we used endangered fern species in China as a case study, and we applied conservation planning software coupled with endangered fern species distribution data and distribution modeling to plan conservation areas with high priority protection needs under climate change. We identified appropriate PAs for endangered fern species under climate change based on the IUCN protected area categories (from Ia to VI) and planned additional PAs for endangered fern species. The high priority regions for protecting the endangered fern species were distributed throughout southern China. With decreasing temperature seasonality, the priority ranking of all endangered fern species is projected to increase in existing PAs. Accordingly, we need to establish conservation areas with low climate vulnerability in existing PAs and expand the conservation areas for endangered fern species in the high priority conservation regions.

32 CFR 643.32 - Policy-Endangered species.

Code of Federal Regulations, 2011 CFR

2011-07-01

... ESTATE Policy § 643.32 Policy—Endangered species. The Endangered Species Act of 1973 (16 U.S.C. 1531 et seq.), declares the intention of Congress to conserve threatened and endangered species of fish... 32 National Defense 4 2011-07-01 2011-07-01 false Policy-Endangered species. 643.32 Section 643.32...

32 CFR 643.32 - Policy-Endangered species.

Code of Federal Regulations, 2013 CFR

2013-07-01

... ESTATE Policy § 643.32 Policy—Endangered species. The Endangered Species Act of 1973 (16 U.S.C. 1531 et seq.), declares the intention of Congress to conserve threatened and endangered species of fish... 32 National Defense 4 2013-07-01 2013-07-01 false Policy-Endangered species. 643.32 Section 643.32...

78 FR 48134 - Endangered and Threatened Wildlife and Plants; 12-Month Finding and Proposed Endangered Listing...

Federal Register 2010, 2011, 2012, 2013, 2014

2013-08-07

...-XZ50 Endangered and Threatened Wildlife and Plants; 12-Month Finding and Proposed Endangered Listing of Five Species of Sawfish Under the Endangered Species Act AGENCY: National Marine Fisheries Service... species: the narrow sawfish (A. cuspidata); dwarf sawfish (P. clavata); largetooth sawfish (collectively P...

32 CFR 643.32 - Policy-Endangered species.

Code of Federal Regulations, 2012 CFR

2012-07-01

... ESTATE Policy § 643.32 Policy—Endangered species. The Endangered Species Act of 1973 (16 U.S.C. 1531 et seq.), declares the intention of Congress to conserve threatened and endangered species of fish... 32 National Defense 4 2012-07-01 2011-07-01 true Policy-Endangered species. 643.32 Section 643.32...

32 CFR 643.32 - Policy-Endangered species.

Code of Federal Regulations, 2014 CFR

2014-07-01

... ESTATE Policy § 643.32 Policy—Endangered species. The Endangered Species Act of 1973 (16 U.S.C. 1531 et seq.), declares the intention of Congress to conserve threatened and endangered species of fish... 32 National Defense 4 2014-07-01 2013-07-01 true Policy-Endangered species. 643.32 Section 643.32...

32 CFR 643.32 - Policy-Endangered species.

Code of Federal Regulations, 2010 CFR

2010-07-01

... ESTATE Policy § 643.32 Policy—Endangered species. The Endangered Species Act of 1973 (16 U.S.C. 1531 et seq.), declares the intention of Congress to conserve threatened and endangered species of fish... 32 National Defense 4 2010-07-01 2010-07-01 true Policy-Endangered species. 643.32 Section 643.32...

77 FR 2314 - Endangered Species; Receipt of Applications for Permit

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2012-01-17

... endangered species. With some exceptions, the Endangered Species Act (ESA) prohibits activities with listed... consideration of section 10(a)(1)(A) of the Endangered Species Act of 1973, as amended (16 U.S.C. 1531 et seq...-FF09A30000] Endangered Species; Receipt of Applications for Permit AGENCY: Fish and Wildlife Service...

78 FR 30325 - Endangered Species; Marine Mammals; Receipt of Applications for Permit

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2013-05-22

... with endangered species, marine mammals, or both. With some exceptions, the Endangered Species Act (ESA... responsibilities for affected species, and in consideration of section 10(a)(1)(A) of the Endangered Species Act of...-FF09A30000] Endangered Species; Marine Mammals; Receipt of Applications for Permit AGENCY: Fish and Wildlife...

78 FR 45954 - Endangered Species; Receipt of Applications for Permit

Federal Register 2010, 2011, 2012, 2013, 2014

2013-07-30

... endangered species. With some exceptions, the Endangered Species Act (ESA) prohibits activities with listed..., and in consideration of section 10(a)(1)(A) of the Endangered Species Act of 1973, as amended (16 U.S...-FF09A30000] Endangered Species; Receipt of Applications for Permit AGENCY: Fish and Wildlife Service...

78 FR 65352 - Endangered Species; Marine Mammals; Receipt of Applications for Permit

Federal Register 2010, 2011, 2012, 2013, 2014

2013-10-31

... with endangered species, marine mammals, or both. With some exceptions, the Endangered Species Act (ESA... responsibilities for affected species, and in consideration of section 10(a)(1)(A) of the Endangered Species Act of...-FF09A30000] Endangered Species; Marine Mammals; Receipt of Applications for Permit AGENCY: Fish and Wildlife...

78 FR 52966 - Endangered Species; Marine Mammals; Receipt of Applications for Permit

Federal Register 2010, 2011, 2012, 2013, 2014

2013-08-27

... with endangered species, marine mammals, or both. With some exceptions, the Endangered Species Act (ESA... responsibilities for affected species, and in consideration of section 10(a)(1)(A) of the Endangered Species Act of...-FF09A30000] Endangered Species; Marine Mammals; Receipt of Applications for Permit AGENCY: Fish and Wildlife...

77 FR 38652 - Endangered Species; Receipt of Applications for Permit

Federal Register 2010, 2011, 2012, 2013, 2014

2012-06-28

... endangered species. With some exceptions, the Endangered Species Act (ESA) prohibits activities with listed..., and in consideration of section 10(a)(1)(A) of the Endangered Species Act of 1973, as amended (16 U.S...-FF09A30000] Endangered Species; Receipt of Applications for Permit AGENCY: Fish and Wildlife Service...

76 FR 80384 - Endangered Species; Receipt of Applications for Permit

Federal Register 2010, 2011, 2012, 2013, 2014

2011-12-23

... endangered species. With some exceptions, the Endangered Species Act (ESA) prohibits activities with listed... of section 10(a)(1)(A) of the Endangered Species Act of 1973, as amended (16 U.S.C. 1531 et seq...-FF09A30000] Endangered Species; Receipt of Applications for Permit AGENCY: Fish and Wildlife Service...

Species boundaries, phylogeography, and conservation genetics of the red-legged frog (Rana aurora/draytonii) complex

USGS Publications Warehouse

Shaffer, H. Bradley; Fellers, Gary M.; Voss, S. Randal; Oliver, J. C.; Pauly, Gregory B.

2004-01-01

The red-legged frog, Rana aurora, has been recognized as both a single, polytypic species and as two distinct species since its original description 150 years ago. It is currently recognized as one species with two geographically contiguous subspecies, aurora and draytonii; the latter is protected under the US Endangered Species Act. We present the results of a survey of 50 populations of red-legged frogs from across their range plus four outgroup species for variation in a phylogenetically informative, ∼400 base pairs (bp) fragment of the mitochondrial cytochromeb gene. Our mtDNA analysis points to several major results. (1) In accord with several other lines of independent evidence, aurora and draytonii are each diagnosably distinct, evolutionary lineages; the mtDNA data indicate that they do not constitute a monophyletic group, but rather that aurora and R. cascadae from the Pacific northwest are sister taxa; (2) the range of thedraytonii mtDNA clade extends about 100 km further north in coastal California than was previously suspected, and corresponds closely with the range limits or phylogeographical breaks of several codistributed taxa; (3) a narrow zone of overlap exists in southern Mendocino County between aurora and draytonii haplotypes, rather than a broad intergradation zone; and (4) the critically endangered population of draytonii in Riverside County, CA forms a distinct clade with frogs from Baja California, Mexico. The currently available evidence favours recognition of auroraand draytonii as separate species with a narrow zone of overlap in northern California.

75 FR 41436 - Endangered and Threatened Wildlife; Notice of 90-Day Finding on a Petition to Revise Critical...

Federal Register 2010, 2011, 2012, 2013, 2014

2010-07-16

... Revise Critical Habitat for the Endangered Leatherback Sea Turtle Under the Endangered Species Act (ESA... Endangered Species Act (ESA). We find that the petition does not present substantial scientific information... Service and the National Marine Fisheries Service in Joint Administration of the Endangered Species Act of...

76 FR 72891 - Endangered and Threatened Wildlife; 90-Day Finding on a Petition To List the Scalloped Hammerhead...

Federal Register 2010, 2011, 2012, 2013, 2014

2011-11-28

... hammerhead shark as threatened or endangered under the Endangered Species Act (ESA), and to designate... NatureServe for listing under the U.S. Endangered Species Act'' because NatureServe assessments ``have... Headquarters Office (see ADDRESSES). Authority The authority for this action is the Endangered Species Act of...

76 FR 25660 - Endangered and Threatened Wildlife; Notice of 90-Day Finding on a Petition to Revise Critical...

Federal Register 2010, 2011, 2012, 2013, 2014

2011-05-05

... to Revise Critical Habitat for the Endangered Leatherback Sea Turtle Under the Endangered Species Act... under the Endangered Species Act (ESA). We find that the petition presents substantial scientific... the Endangered Species Act of 1973 as to Marine Turtles.'' NMFS has jurisdiction over sea turtles and...