Model Errors in Simulating Precipitation and Radiation fields in the NARCCAP Hindcast Experiment
NASA Astrophysics Data System (ADS)
Kim, J.; Waliser, D. E.; Mearns, L. O.; Mattmann, C. A.; McGinnis, S. A.; Goodale, C. E.; Hart, A. F.; Crichton, D. J.
2012-12-01
The relationship between the model errors in simulating precipitation and radiation fields including the surface insolation and OLR, is examined from the multi-RCM NARCCAP hindcast experiment for the conterminous U.S. region. Findings in this study suggest that the RCM biases in simulating precipitation are related with those in simulating radiation fields. For a majority of RCMs participated in the NARCCAP hindcast experiment as well as their ensemble, the spatial pattern of the insolation bias is negatively correlated with that of the precipitation bias, suggesting that the biases in precipitation and surface insolation are systematically related, most likely via the cloud fields. The relationship varies according to seasons as well with stronger relationship between the simulated precipitation and surface insolation during winter. This suggests that the RCM biases in precipitation and radiation are related via cloud fields. Additional analysis on the RCM errors in OLR is underway to examine more details of this relationship.
NASA Technical Reports Server (NTRS)
Smith, J. H.
1994-01-01
This computer program, SOLINS, was developed to aid engineers and solar system designers in the accurate modeling of the average hourly solar insolation on a surface of arbitrary orientation. The program can be used to study insolation problems specific to residential and commercial applications where the amount of space available for solar collectors is limited by shadowing problems, energy output requirements, and costs. For tandem rack arrays, SOLINS will accommodate the use of augmentation reflectors built into the support structure to increase insolation values at the collector surface. As the use of flat plate solar collectors becomes more prevalent in the building industry, the engineer and designer must have the capability to conduct extensive sensitivity analyses on the orientation and location of solar collectors. SOLINS should prove to be a valuable aid in this area of engineering. SOLINS uses a modified version of the National Bureau of Standards model to calculate the direct, diffuse, and reflected components of total insolation on a tilted surface with a given azimuthal orientation. The model is based on the work of Liu and Jordan with corrections by Kusuda and Ishii to account for early morning and late afternoon errors. The model uses a parametric description of the average day solar climate to generate monthly average day profiles by hour of the insolation level on the collector surface. The model includes accommodation of user specified ground and landscape reflectivities at the collector site. For roof or ground mounted, tilted arrays, SOLINS will calculate insolation including the effects of shadowing and augmentation reflectors. The user provides SOLINS with data describing the array design, array orientation, the month, the solar climate parameter, the ground reflectance, and printout control specifications. For the specified array and environmental conditions, SOLINS outputs the hourly insolation the array will receive during an average day during the month specified, along with the total insolation the collector surface will receive over an average 24-hour period. This program is written in FORTRAN IV for batch execution and has been implemented on an IBM 370 computer with a central memory requirement of approximately 46K of 8 bit bytes. The SOLINS routines were developed in 1979.
NASA Technical Reports Server (NTRS)
Smith, J. H.
1980-01-01
Average hourly and daily total insolation estimates for 235 United States locations are presented. Values are presented for a selected number of array tilt angles on a monthly basis. All units are in kilowatt hours per square meter.
Tropical Convection and Climate Processes in a Cumulus Ensemble Model
NASA Technical Reports Server (NTRS)
Sui, Chung-Hsiung
1999-01-01
Local convective-radiative equilibrium states of the tropical atmosphere are determined by the following external forcing: 1) Insolation, 2) Surface heat and moisture exchanges (primarily radiation and evaporation), 3) Heating and moistening induced by large-scale circulation. Understanding the equilibrium states of the tropical atmosphere in different external forcing conditions is of vital importance for studying cumulus parameterization, climate feedbacks, and climate changes. We extend our previous study using the Goddard Cumulus Ensemble (GCE) Model which resolves convective-radiative processes more explicitly than global climate models do. Several experiments are carried out under fixed insolation and sea surface temperature. The prescribed SST consists of a uniform warm pool (29C) surrounded by uniform cold SST (26C). The model produces "Walker"-type circulation with the ascending branch of the model atmosphere more humid than the descending part, but the vertically integrated temperature does not show a horizontal gradient. The results are compared with satellite measured moisture by SSM/I (Special Sensor Microwave/Imager) and temperature by MSU in the ascending and descending tropical atmosphere. The vertically integrated temperature and humidity in the two model regimes are comparable to the observed values in the tropics.
Data challenges in estimating the capacity value of solar photovoltaics
DOE Office of Scientific and Technical Information (OSTI.GOV)
Gami, Dhruv; Sioshansi, Ramteen; Denholm, Paul
We examine the robustness of solar capacity-value estimates to three important data issues. The first is the sensitivity to using hourly averaged as opposed to subhourly solar-insolation data. The second is the sensitivity to errors in recording and interpreting load data. The third is the sensitivity to using modeled as opposed to measured solar-insolation data. We demonstrate that capacity-value estimates of solar are sensitive to all three of these factors, with potentially large errors in the capacity-value estimate in a particular year. If multiple years of data are available, the biases introduced by using hourly averaged solar-insolation can be smoothedmore » out. Multiple years of data will not necessarily address the other data-related issues that we examine. Our analysis calls into question the accuracy of a number of solar capacity-value estimates relying exclusively on modeled solar-insolation data that are reported in the literature (including our own previous works). Lastly, our analysis also suggests that multiple years’ historical data should be used for remunerating solar generators for their capacity value in organized wholesale electricity markets.« less
Data Challenges in Estimating the Capacity Value of Solar Photovoltaics
DOE Office of Scientific and Technical Information (OSTI.GOV)
Gami, Dhruv; Sioshansi, Ramteen; Denholm, Paul
We examine the robustness of solar capacity-value estimates to three important data issues. The first is the sensitivity to using hourly averaged as opposed to subhourly solar-insolation data. The second is the sensitivity to errors in recording and interpreting load data. The third is the sensitivity to using modeled as opposed to measured solar-insolation data. We demonstrate that capacity-value estimates of solar are sensitive to all three of these factors, with potentially large errors in the capacity-value estimate in a particular year. If multiple years of data are available, the biases introduced by using hourly averaged solar-insolation can be smoothedmore » out. Multiple years of data will not necessarily address the other data-related issues that we examine. Our analysis calls into question the accuracy of a number of solar capacity-value estimates relying exclusively on modeled solar-insolation data that are reported in the literature (including our own previous works). Our analysis also suggests that multiple years' historical data should be used for remunerating solar generators for their capacity value in organized wholesale electricity markets.« less
Data challenges in estimating the capacity value of solar photovoltaics
Gami, Dhruv; Sioshansi, Ramteen; Denholm, Paul
2017-04-30
We examine the robustness of solar capacity-value estimates to three important data issues. The first is the sensitivity to using hourly averaged as opposed to subhourly solar-insolation data. The second is the sensitivity to errors in recording and interpreting load data. The third is the sensitivity to using modeled as opposed to measured solar-insolation data. We demonstrate that capacity-value estimates of solar are sensitive to all three of these factors, with potentially large errors in the capacity-value estimate in a particular year. If multiple years of data are available, the biases introduced by using hourly averaged solar-insolation can be smoothedmore » out. Multiple years of data will not necessarily address the other data-related issues that we examine. Our analysis calls into question the accuracy of a number of solar capacity-value estimates relying exclusively on modeled solar-insolation data that are reported in the literature (including our own previous works). Lastly, our analysis also suggests that multiple years’ historical data should be used for remunerating solar generators for their capacity value in organized wholesale electricity markets.« less
Yard, M.D.; Bennett, G.E.; Mietz, S.N.; Coggins, L.G.; Stevens, L.E.; Hueftle, S.; Blinn, D.W.
2005-01-01
Rugged topography along the Colorado River in Glen and Grand Canyons, exemplifies features common to canyon-bound streams and rivers of the arid southwest. Physical relief influences regulated river systems, especially those that are altered, and have become partially reliant on aquatic primary production. We measured and modeled instantaneous solar flux in a topographically complex environment to determine where differences in daily, seasonal and annual solar insolation occurred in this river system. At a system-wide scale, topographic complexity generates a spatial and temporal mosaic of varying solar insolation. This solar variation is a predictable consequence of channel orientation, geomorphology, elevation angles and viewshed. Modeled estimates for clear conditions corresponded closely with observed measurements for both instantaneous photosynthetic photon flux density (PPFD: ??mol m-2 s-1) and daily insolation levels (relative error 2.3%, CI ??0.45, S.D. 0.3, n = 29,813). Mean annual daily insolation levels system-wide were estimated to be 36 mol m-2 d -1 (17.5 S.D.), and seasonally varied on average from 13.4-57.4 mol m-2 d-1, for winter and summer, respectively. In comparison to identical areas lacking topographic effect (idealized plane), mean daily insolation levels were reduced by 22% during summer, and as much as 53% during winter. Depending on outlying topography, canyon bound regions having east-west (EW) orientations had higher seasonal variation, averaging from 8.1 to 61.4 mol m-2 d-1, for winter and summer, respectively. For EW orientations, 70% of mid-channel sites were obscured from direct incidence during part of the year; and of these sites, average diffuse light conditions persisted for 19.3% of the year (70.5 days), and extended upwards to 194 days. This predictive model has provided an initial quantitative step to estimate and determine the importance of autotrophic production for this ecosystem, as well as a broader application for other canyon systems. ?? 2004 Published by Elsevier B.V.
Owings, Tammy M; Woerner, Julie L; Frampton, Jason D; Cavanagh, Peter R; Botek, Georgeanne
2008-05-01
The purpose of this study was to determine whether custom insoles tailored to contours of the barefoot pressure distribution and shape of a patient's foot can reduce plantar pressures in the metatarsal head (MTH) region to a greater extent than conventional custom insoles. Seventy regions of elevated barefoot pressures (mean peak 834 kPa under MTHs) were identified in 20 subjects with diabetes. Foam box impressions of their feet were sent to three different orthotic supply companies for fabrication of custom insoles. One company was also given plantar pressure data, which were incorporated into the insole design. Measurements of in-shoe plantar pressures were recorded during gait for the three custom insoles in a flexible and a rocker-bottom shoe. Peak pressure and force-time integral were extracted for analysis. In 64 of 70 regions, the shape-plus-pressure-based insole in the flexible shoe achieved superior unloading compared with the two shape-based insoles. On average, peak pressure was reduced by 32 and 21% (both P
An Apparatus to Quantify Anteroposterior and Mediolateral Shear Reduction in Shoe Insoles
Belmont, Barry; Wang, Yancheng; Ammanath, Peethambaran; Wrobel, James S.; Shih, Albert
2013-01-01
Background Many of the physiological changes that lead to diabetic foot ulceration, such as muscle atrophy and skin hardening, are manifested at the foot–ground interface via pressure and shear points. Novel shear-reducing insoles have been developed, but their magnitude of shear stiffness has not yet been compared with regular insoles. The aim of this study was to develop an apparatus that would apply shear force and displacement to an insole’s forefoot region, reliably measure deformation, and calculate insole shear stiffness. Methods An apparatus consisting of suspended weights was designed to test the forefoot region of insoles. Three separate regions representing the hallux; the first and second metatarsals; and the third, fourth, and fifth metatarsals were sheared at 20 mm/min for displacements from 0.1 to 1.0 mm in both the anteroposterior and mediolateral directions for two types of insoles (regular and shear reducing). Results Shear reduction was found to be significant for the intervention insoles under all testing conditions. The ratio of a regular insole’s effective stiffness and the experimental insole’s effective stiffness across forefoot position versus shear direction, gait instance versus shear direction, and forefoot position versus gait instance was 270% ± 79%, 270% ± 96%, and 270% ± 86%, respectively. The apparatus was reliable with an average measured coefficient of variation of 0.034 and 0.069 for the regular and shear-reducing insole, respectively. Conclusions An apparatus consisting of suspended weights resting atop three locations of interest sheared across an insole was demonstrated to be capable of measuring the insole shear stiffness accurately, thus quantifying shear-reducing effects of a new type of insole. PMID:23567000
van Diedenhoven, Bastiaan; Ackerman, Andrew S.; Fridlind, Ann M.; Cairns, Brian
2017-01-01
The use of ensemble-average values of aspect ratio and distortion parameter of hexagonal ice prisms for the estimation of ensemble-average scattering asymmetry parameters is evaluated. Using crystal aspect ratios greater than unity generally leads to ensemble-average values of aspect ratio that are inconsistent with the ensemble-average asymmetry parameters. When a definition of aspect ratio is used that limits the aspect ratio to below unity (α≤1) for both hexagonal plates and columns, the effective asymmetry parameters calculated using ensemble-average aspect ratios are generally consistent with ensemble-average asymmetry parameters, especially if aspect ratios are geometrically averaged. Ensemble-average distortion parameters generally also yield effective asymmetry parameters that are largely consistent with ensemble-average asymmetry parameters. In the case of mixtures of plates and columns, it is recommended to geometrically average the α≤1 aspect ratios and to subsequently calculate the effective asymmetry parameter using a column or plate geometry when the contribution by columns to a given mixture’s total projected area is greater or lower than 50%, respectively. In addition, we show that ensemble-average aspect ratios, distortion parameters and asymmetry parameters can generally be retrieved accurately from simulated multi-directional polarization measurements based on mixtures of varying columns and plates. However, such retrievals tend to be somewhat biased toward yielding column-like aspect ratios. Furthermore, generally large retrieval errors can occur for mixtures with approximately equal contributions of columns and plates and for ensembles with strong contributions of thin plates. PMID:28983127
2008073000 2008072900 2008072800 Background information bias reduction = ( | domain-averaged ensemble mean bias | - | domain-averaged bias-corrected ensemble mean bias | / | domain-averaged bias-corrected ensemble mean bias | NAEFS Products | NAEFS | EMC Ensemble Products EMC | NCEP | National Weather Service
On the Departure from Isothermality of Pluto's Volatile Ice due to Local Insolation and Topography
NASA Astrophysics Data System (ADS)
Trafton, Laurence M.; Stansberry, John A.
2015-11-01
Pluto’s atmosphere is known to be supported by the vapor pressure of ices that are volatile at low temperature, primarily N2 and secondarily CH4 and CO. The atmospheric bulk is regulated by the globally average temperature of the ice, which is determined by a radiative balance between the diurnally average insolation absorbed globally by the volatile ice and the global volatile ice thermal radiation. This bulk is sufficient that Pluto’s atmosphere is close to hydrostatic equilibrium, though this may not remain so as Pluto continues to move towards aphelion. With the weight of the atmosphere currently distributed evenly around the body, the ice temperature is expected to be globally isothermal in absence of topographic variations, due to the transport of latent heat from regions of high insolation to low insolation through sublimation and condensation. Images returned from the New Horizons spacecraft show topographical features, including mountain ranges that extend above 3.5 km, with albedo variations that suggest a topographical dimension or dependence of the volatile ice deposits. In general, the conditions often applied to a volatile atmosphere of hydrostatic equilibrium and vapor-solid phase equilibrium are approximations that may not always both be appropriate. This is particularly the case in the presence of topography when the atmospheric lapse rate differs from the wet adiabat. We present our results of an investigation of the effect of variable insolation and topography on Pluto’s local ice temperature assuming an atmosphere close to hydrostatic equilibrium.
2008112500 2008112400 Background information bias reduction = ( | domain-averaged ensemble mean bias | - | domain-averaged bias-corrected ensemble mean bias | / | domain-averaged bias-corrected ensemble mean bias
Yamaguchi, Satoshi; Kitamura, Masako; Ushikubo, Tomohiro; Murata, Atsushi; Akagi, Ryuichiro; Sasho, Takahisa
2015-01-01
Biomechanical effects of laterally wedged insoles are assessed by reduction in the knee adduction moment. However, the degree of reduction may vary depending on the reference frame with which it is calculated. The purpose of this study was to clarify the effect of reference frame on the reduction in the knee adduction moment by laterally wedged insoles. Twenty-nine healthy participants performed gait trials with a laterally wedged insole and with a flat insole as a control. The knee adduction moment, including the first and second peaks and the angular impulse, were calculated using four different reference frames: the femoral frame, tibial frame, laboratory frame and the Joint Coordinate System. There were significant effects of reference frame on the knee adduction moment first and second peaks (P < 0.001 for both variables), while the effect was not significant for the angular impulse (P = 0.84). No significant interaction between the gait condition and reference frame was found in either of the knee adduction moment variables (P = 0.99 for all variables), indicating that the effects of laterally wedged insole on the knee adduction moments were similar across the four reference frames. On the other hand, the average percent changes ranged from 9% to 16% for the first peak, from 16% to 18% for the second peak and from 17% to 21% for the angular impulse when using the different reference frames. The effects of laterally wedged insole on the reduction in the knee adduction moment were similar across the reference frames. On the other hand, Researchers need to recognize that when the percent change was used as the parameter of the efficacy of laterally wedged insole, the choice of reference frame may influence the interpretation of how laterally wedged insoles affect the knee adduction moment.
Paech, S.J.; Mecikalski, J.R.; Sumner, D.M.; Pathak, C.S.; Wu, Q.; Islam, S.; Sangoyomi, T.
2009-01-01
Estimates of incoming solar radiation (insolation) from Geostationary Operational Environmental Satellite observations have been produced for the state of Florida over a 10-year period (1995-2004). These insolation estimates were developed into well-calibrated half-hourly and daily integrated solar insolation fields over the state at 2 km resolution, in addition to a 2-week running minimum surface albedo product. Model results of the daily integrated insolation were compared with ground-based pyranometers, and as a result, the entire dataset was calibrated. This calibration was accomplished through a three-step process: (1) comparison with ground-based pyranometer measurements on clear (noncloudy) reference days, (2) correcting for a bias related to cloudiness, and (3) deriving a monthly bias correction factor. Precalibration results indicated good model performance, with a station-averaged model error of 2.2 MJ m-2/day (13%). Calibration reduced errors to 1.7 MJ m -2/day (10%), and also removed temporal-related, seasonal-related, and satellite sensor-related biases. The calibrated insolation dataset will subsequently be used by state of Florida Water Management Districts to produce statewide, 2-km resolution maps of estimated daily reference and potential evapotranspiration for water management-related activities. ?? 2009 American Water Resources Association.
Haberman, Jason; Brady, Timothy F; Alvarez, George A
2015-04-01
Ensemble perception, including the ability to "see the average" from a group of items, operates in numerous feature domains (size, orientation, speed, facial expression, etc.). Although the ubiquity of ensemble representations is well established, the large-scale cognitive architecture of this process remains poorly defined. We address this using an individual differences approach. In a series of experiments, observers saw groups of objects and reported either a single item from the group or the average of the entire group. High-level ensemble representations (e.g., average facial expression) showed complete independence from low-level ensemble representations (e.g., average orientation). In contrast, low-level ensemble representations (e.g., orientation and color) were correlated with each other, but not with high-level ensemble representations (e.g., facial expression and person identity). These results suggest that there is not a single domain-general ensemble mechanism, and that the relationship among various ensemble representations depends on how proximal they are in representational space. (c) 2015 APA, all rights reserved).
Critical insolation-CO2 relation for diagnosing past and future glacial inception.
Ganopolski, A; Winkelmann, R; Schellnhuber, H J
2016-01-14
The past rapid growth of Northern Hemisphere continental ice sheets, which terminated warm and stable climate periods, is generally attributed to reduced summer insolation in boreal latitudes. Yet such summer insolation is near to its minimum at present, and there are no signs of a new ice age. This challenges our understanding of the mechanisms driving glacial cycles and our ability to predict the next glacial inception. Here we propose a critical functional relationship between boreal summer insolation and global carbon dioxide (CO2) concentration, which explains the beginning of the past eight glacial cycles and might anticipate future periods of glacial inception. Using an ensemble of simulations generated by an Earth system model of intermediate complexity constrained by palaeoclimatic data, we suggest that glacial inception was narrowly missed before the beginning of the Industrial Revolution. The missed inception can be accounted for by the combined effect of relatively high late-Holocene CO2 concentrations and the low orbital eccentricity of the Earth. Additionally, our analysis suggests that even in the absence of human perturbations no substantial build-up of ice sheets would occur within the next several thousand years and that the current interglacial would probably last for another 50,000 years. However, moderate anthropogenic cumulative CO2 emissions of 1,000 to 1,500 gigatonnes of carbon will postpone the next glacial inception by at least 100,000 years. Our simulations demonstrate that under natural conditions alone the Earth system would be expected to remain in the present delicately balanced interglacial climate state, steering clear of both large-scale glaciation of the Northern Hemisphere and its complete deglaciation, for an unusually long time.
Statistical Ensemble of Large Eddy Simulations
NASA Technical Reports Server (NTRS)
Carati, Daniele; Rogers, Michael M.; Wray, Alan A.; Mansour, Nagi N. (Technical Monitor)
2001-01-01
A statistical ensemble of large eddy simulations (LES) is run simultaneously for the same flow. The information provided by the different large scale velocity fields is used to propose an ensemble averaged version of the dynamic model. This produces local model parameters that only depend on the statistical properties of the flow. An important property of the ensemble averaged dynamic procedure is that it does not require any spatial averaging and can thus be used in fully inhomogeneous flows. Also, the ensemble of LES's provides statistics of the large scale velocity that can be used for building new models for the subgrid-scale stress tensor. The ensemble averaged dynamic procedure has been implemented with various models for three flows: decaying isotropic turbulence, forced isotropic turbulence, and the time developing plane wake. It is found that the results are almost independent of the number of LES's in the statistical ensemble provided that the ensemble contains at least 16 realizations.
NASA Astrophysics Data System (ADS)
Lee, H.
2016-12-01
Precipitation is one of the most important climate variables that are taken into account in studying regional climate. Nevertheless, how precipitation will respond to a changing climate and even its mean state in the current climate are not well represented in regional climate models (RCMs). Hence, comprehensive and mathematically rigorous methodologies to evaluate precipitation and related variables in multiple RCMs are required. The main objective of the current study is to evaluate the joint variability of climate variables related to model performance in simulating precipitation and condense multiple evaluation metrics into a single summary score. We use multi-objective optimization, a mathematical process that provides a set of optimal tradeoff solutions based on a range of evaluation metrics, to characterize the joint representation of precipitation, cloudiness and insolation in RCMs participating in the North American Regional Climate Change Assessment Program (NARCCAP) and Coordinated Regional Climate Downscaling Experiment-North America (CORDEX-NA). We also leverage ground observations, NASA satellite data and the Regional Climate Model Evaluation System (RCMES). Overall, the quantitative comparison of joint probability density functions between the three variables indicates that performance of each model differs markedly between sub-regions and also shows strong seasonal dependence. Because of the large variability across the models, it is important to evaluate models systematically and make future projections using only models showing relatively good performance. Our results indicate that the optimized multi-model ensemble always shows better performance than the arithmetic ensemble mean and may guide reliable future projections.
Cosmological ensemble and directional averages of observables
DOE Office of Scientific and Technical Information (OSTI.GOV)
Bonvin, Camille; Clarkson, Chris; Durrer, Ruth
We show that at second order, ensemble averages of observables and directional averages do not commute due to gravitational lensing—observing the same thing in many directions over the sky is not the same as taking an ensemble average. In principle this non-commutativity is significant for a variety of quantities that we often use as observables and can lead to a bias in parameter estimation. We derive the relation between the ensemble average and the directional average of an observable, at second order in perturbation theory. We discuss the relevance of these two types of averages for making predictions of cosmologicalmore » observables, focusing on observables related to distances and magnitudes. In particular, we show that the ensemble average of the distance in a given observed direction is increased by gravitational lensing, whereas the directional average of the distance is decreased. For a generic observable, there exists a particular function of the observable that is not affected by second-order lensing perturbations. We also show that standard areas have an advantage over standard rulers, and we discuss the subtleties involved in averaging in the case of supernova observations.« less
Ensemble Sampling vs. Time Sampling in Molecular Dynamics Simulations of Thermal Conductivity
Gordiz, Kiarash; Singh, David J.; Henry, Asegun
2015-01-29
In this report we compare time sampling and ensemble averaging as two different methods available for phase space sampling. For the comparison, we calculate thermal conductivities of solid argon and silicon structures, using equilibrium molecular dynamics. We introduce two different schemes for the ensemble averaging approach, and show that both can reduce the total simulation time as compared to time averaging. It is also found that velocity rescaling is an efficient mechanism for phase space exploration. Although our methodology is tested using classical molecular dynamics, the ensemble generation approaches may find their greatest utility in computationally expensive simulations such asmore » first principles molecular dynamics. For such simulations, where each time step is costly, time sampling can require long simulation times because each time step must be evaluated sequentially and therefore phase space averaging is achieved through sequential operations. On the other hand, with ensemble averaging, phase space sampling can be achieved through parallel operations, since each ensemble is independent. For this reason, particularly when using massively parallel architectures, ensemble sampling can result in much shorter simulation times and exhibits similar overall computational effort.« less
Multi-Model Ensemble Wake Vortex Prediction
NASA Technical Reports Server (NTRS)
Koerner, Stephan; Holzaepfel, Frank; Ahmad, Nash'at N.
2015-01-01
Several multi-model ensemble methods are investigated for predicting wake vortex transport and decay. This study is a joint effort between National Aeronautics and Space Administration and Deutsches Zentrum fuer Luft- und Raumfahrt to develop a multi-model ensemble capability using their wake models. An overview of different multi-model ensemble methods and their feasibility for wake applications is presented. The methods include Reliability Ensemble Averaging, Bayesian Model Averaging, and Monte Carlo Simulations. The methodologies are evaluated using data from wake vortex field experiments.
NASA Astrophysics Data System (ADS)
Purdue, James R.
1989-11-01
White-tailed deer ( Odocoileus virginianus) from central Illinois varied in size during the Holocene. The record, which extends back to 8450 yr B.P., indicates small deer through the mid-Holocene until 3650 yr B.P., after which size increases. Although influences of winter climate, seasonality, anthropogenic effects, and other ecological factors should not be discounted, an intriguing possible cause of the deer size shifts is insolation-driven summer climate and its influence on food resources. In the Holocene, small deer size is correlated with high summer insolation and with low winter insolation. Climatic models indicate that in spite of changes in insolation, Holocene winters did not vary greatly through time, especially in contrast to summers, which were dynamic. Physiological constraints peculiar to O. virginianus make critical the quality of summer forage for determining final adult size. Summer temperature averaged 2°C warmer than present during the middle Holocene, which increased evaporation and probably reduced the period of availability of high-quality forage low in fiber and high in protein. Consequently, less fuel for growth was consumed by mid-Holocene deer and only small body size was achieved. Other possible causes (e.g., Bergmann's rule, seasonality) of clinal variation are considered with reference to central Illinois deer, but at present the most parsimonious explanation appears to be the summer insolation hypothesis.
Reduced set averaging of face identity in children and adolescents with autism.
Rhodes, Gillian; Neumann, Markus F; Ewing, Louise; Palermo, Romina
2015-01-01
Individuals with autism have difficulty abstracting and updating average representations from their diet of faces. These averages function as perceptual norms for coding faces, and poorly calibrated norms may contribute to face recognition difficulties in autism. Another kind of average, known as an ensemble representation, can be abstracted from briefly glimpsed sets of faces. Here we show for the first time that children and adolescents with autism also have difficulty abstracting ensemble representations from sets of faces. On each trial, participants saw a study set of four identities and then indicated whether a test face was present. The test face could be a set average or a set identity, from either the study set or another set. Recognition of set averages was reduced in participants with autism, relative to age- and ability-matched typically developing participants. This difference, which actually represents more accurate responding, indicates weaker set averaging and thus weaker ensemble representations of face identity in autism. Our finding adds to the growing evidence for atypical abstraction of average face representations from experience in autism. Weak ensemble representations may have negative consequences for face processing in autism, given the importance of ensemble representations in dealing with processing capacity limitations.
NASA Astrophysics Data System (ADS)
1982-03-01
Performance data are given for the month of February, 1982 for a photovoltaic power supply at a Massachusetts high school. Data given include: monthly and daily electrical energy yield; monthly and daily insolation; monthly and daily array efficiency; energy production as a function of power level, voltage, cell temperature, and hour of day; insolation as a function of hour of the day; input, output and efficiency for each of two power conditioning units and for the total power conditioning system; energy supplied to the load by the photovoltaic system and by the grid; photovoltaic system efficiency; dollar value of the energy supplied by the photovoltaic system; capacity factor; daily photovoltaic energy to load; daily system availability and hours of daylight; heating and cooling degree days; hourly cell temperature, ambient temperature, wind speed, and insolation; average monthly wind speed; wind direction distribution; and daily data acquisition mode and recording interval plot.
NASA Astrophysics Data System (ADS)
Erfanian, A.; Fomenko, L.; Wang, G.
2016-12-01
Multi-model ensemble (MME) average is considered the most reliable for simulating both present-day and future climates. It has been a primary reference for making conclusions in major coordinated studies i.e. IPCC Assessment Reports and CORDEX. The biases of individual models cancel out each other in MME average, enabling the ensemble mean to outperform individual members in simulating the mean climate. This enhancement however comes with tremendous computational cost, which is especially inhibiting for regional climate modeling as model uncertainties can originate from both RCMs and the driving GCMs. Here we propose the Ensemble-based Reconstructed Forcings (ERF) approach to regional climate modeling that achieves a similar level of bias reduction at a fraction of cost compared with the conventional MME approach. The new method constructs a single set of initial and boundary conditions (IBCs) by averaging the IBCs of multiple GCMs, and drives the RCM with this ensemble average of IBCs to conduct a single run. Using a regional climate model (RegCM4.3.4-CLM4.5), we tested the method over West Africa for multiple combination of (up to six) GCMs. Our results indicate that the performance of the ERF method is comparable to that of the MME average in simulating the mean climate. The bias reduction seen in ERF simulations is achieved by using more realistic IBCs in solving the system of equations underlying the RCM physics and dynamics. This endows the new method with a theoretical advantage in addition to reducing computational cost. The ERF output is an unaltered solution of the RCM as opposed to a climate state that might not be physically plausible due to the averaging of multiple solutions with the conventional MME approach. The ERF approach should be considered for use in major international efforts such as CORDEX. Key words: Multi-model ensemble, ensemble analysis, ERF, regional climate modeling
Plantar pressure cartography reconstruction from 3 sensors.
Abou Ghaida, Hussein; Mottet, Serge; Goujon, Jean-Marc
2014-01-01
Foot problem diagnosis is often made by using pressure mapping systems, unfortunately located and used in the laboratories. In the context of e-health and telemedicine for home monitoring of patients having foot problems, our focus is to present an acceptable system for daily use. We developed an ambulatory instrumented insole using 3 pressures sensors to visualize plantar pressure cartographies. We show that a standard insole with fixed sensor position could be used for different foot sizes. The results show an average error measured at each pixel of 0.01 daN, with a standard deviation of 0.005 daN.
Wilkinson, Michael; Ewen, Alistair; Caplan, Nicholas; O'leary, David; Smith, Neil; Stoneham, Richard; Saxby, Lee
2018-05-01
The effect of textured insoles on kinetics and kinematics of overground running was assessed. 16 male injury-free-recreational runners attended a single visit (age 23 ± 5 yrs; stature 1.78 ± 0.06 m; mass 72.6 ± 9.2 kg). Overground 15-m runs were completed in flat, canvas plimsolls both with and without textured insoles at self-selected velocity on an indoor track in an order that was balanced among participants. Average vertical loading rate and peak vertical force (F peak ) were captured by force platforms. Video footage was digitised for sagittal plane hip, knee and ankle angles at foot strike and mid stance. Velocity, stride rate and length and contact and flight time were determined. Subjectively rated plantar sensation was recorded by visual scale. 95% confidence intervals estimated mean differences. Smallest worthwhile change in loading rate was defined as standardised reduction of 0.54 from a previous comparison of injured versus non-injured runners. Loading rate decreased (-25 to -9.3 BW s -1 ; 60% likely beneficial reduction) and plantar sensation was increased (46-58 mm) with the insole. F peak (-0.1 to 0.14 BW) and velocity (-0.02 to 0.06 m s -1 ) were similar. Stride length, flight and contact time were lower (-0.13 to -0.01 m; -0.02 to-0.01 s; -0.016 to -0.006 s) and stride rate was higher (0.01-0.07 steps s -1 ) with insoles. Textured insoles elicited an acute, meaningful decrease in vertical loading rate in short distance, overground running and were associated with subjectively increased plantar sensation. Reduced vertical loading rate could be explained by altered stride characteristics.
Yang, Shan; Al-Hashimi, Hashim M.
2016-01-01
A growing number of studies employ time-averaged experimental data to determine dynamic ensembles of biomolecules. While it is well known that different ensembles can satisfy experimental data to within error, the extent and nature of these degeneracies, and their impact on the accuracy of the ensemble determination remains poorly understood. Here, we use simulations and a recently introduced metric for assessing ensemble similarity to explore degeneracies in determining ensembles using NMR residual dipolar couplings (RDCs) with specific application to A-form helices in RNA. Various target ensembles were constructed representing different domain-domain orientational distributions that are confined to a topologically restricted (<10%) conformational space. Five independent sets of ensemble averaged RDCs were then computed for each target ensemble and a ‘sample and select’ scheme used to identify degenerate ensembles that satisfy RDCs to within experimental uncertainty. We find that ensembles with different ensemble sizes and that can differ significantly from the target ensemble (by as much as ΣΩ ~ 0.4 where ΣΩ varies between 0 and 1 for maximum and minimum ensemble similarity, respectively) can satisfy the ensemble averaged RDCs. These deviations increase with the number of unique conformers and breadth of the target distribution, and result in significant uncertainty in determining conformational entropy (as large as 5 kcal/mol at T = 298 K). Nevertheless, the RDC-degenerate ensembles are biased towards populated regions of the target ensemble, and capture other essential features of the distribution, including the shape. Our results identify ensemble size as a major source of uncertainty in determining ensembles and suggest that NMR interactions such as RDCs and spin relaxation, on their own, do not carry the necessary information needed to determine conformational entropy at a useful level of precision. The framework introduced here provides a general approach for exploring degeneracies in ensemble determination for different types of experimental data. PMID:26131693
Ensemble perception of color in autistic adults.
Maule, John; Stanworth, Kirstie; Pellicano, Elizabeth; Franklin, Anna
2017-05-01
Dominant accounts of visual processing in autism posit that autistic individuals have an enhanced access to details of scenes [e.g., weak central coherence] which is reflected in a general bias toward local processing. Furthermore, the attenuated priors account of autism predicts that the updating and use of summary representations is reduced in autism. Ensemble perception describes the extraction of global summary statistics of a visual feature from a heterogeneous set (e.g., of faces, sizes, colors), often in the absence of local item representation. The present study investigated ensemble perception in autistic adults using a rapidly presented (500 msec) ensemble of four, eight, or sixteen elements representing four different colors. We predicted that autistic individuals would be less accurate when averaging the ensembles, but more accurate in recognizing individual ensemble colors. The results were consistent with the predictions. Averaging was impaired in autism, but only when ensembles contained four elements. Ensembles of eight or sixteen elements were averaged equally accurately across groups. The autistic group also showed a corresponding advantage in rejecting colors that were not originally seen in the ensemble. The results demonstrate the local processing bias in autism, but also suggest that the global perceptual averaging mechanism may be compromised under some conditions. The theoretical implications of the findings and future avenues for research on summary statistics in autism are discussed. Autism Res 2017, 10: 839-851. © 2016 International Society for Autism Research, Wiley Periodicals, Inc. © 2016 International Society for Autism Research, Wiley Periodicals, Inc.
Ensemble perception of color in autistic adults
Stanworth, Kirstie; Pellicano, Elizabeth; Franklin, Anna
2016-01-01
Dominant accounts of visual processing in autism posit that autistic individuals have an enhanced access to details of scenes [e.g., weak central coherence] which is reflected in a general bias toward local processing. Furthermore, the attenuated priors account of autism predicts that the updating and use of summary representations is reduced in autism. Ensemble perception describes the extraction of global summary statistics of a visual feature from a heterogeneous set (e.g., of faces, sizes, colors), often in the absence of local item representation. The present study investigated ensemble perception in autistic adults using a rapidly presented (500 msec) ensemble of four, eight, or sixteen elements representing four different colors. We predicted that autistic individuals would be less accurate when averaging the ensembles, but more accurate in recognizing individual ensemble colors. The results were consistent with the predictions. Averaging was impaired in autism, but only when ensembles contained four elements. Ensembles of eight or sixteen elements were averaged equally accurately across groups. The autistic group also showed a corresponding advantage in rejecting colors that were not originally seen in the ensemble. The results demonstrate the local processing bias in autism, but also suggest that the global perceptual averaging mechanism may be compromised under some conditions. The theoretical implications of the findings and future avenues for research on summary statistics in autism are discussed. Autism Res 2017, 10: 839–851. © 2016 The Authors Autism Research published by Wiley Periodicals, Inc. on behalf of International Society for Autism Research PMID:27874263
Multimodel Ensemble Methods for Prediction of Wake-Vortex Transport and Decay Originating NASA
NASA Technical Reports Server (NTRS)
Korner, Stephan; Ahmad, Nashat N.; Holzapfel, Frank; VanValkenburg, Randal L.
2017-01-01
Several multimodel ensemble methods are selected and further developed to improve the deterministic and probabilistic prediction skills of individual wake-vortex transport and decay models. The different multimodel ensemble methods are introduced, and their suitability for wake applications is demonstrated. The selected methods include direct ensemble averaging, Bayesian model averaging, and Monte Carlo simulation. The different methodologies are evaluated employing data from wake-vortex field measurement campaigns conducted in the United States and Germany.
Scale-invariant Green-Kubo relation for time-averaged diffusivity
NASA Astrophysics Data System (ADS)
Meyer, Philipp; Barkai, Eli; Kantz, Holger
2017-12-01
In recent years it was shown both theoretically and experimentally that in certain systems exhibiting anomalous diffusion the time- and ensemble-averaged mean-squared displacement are remarkably different. The ensemble-averaged diffusivity is obtained from a scaling Green-Kubo relation, which connects the scale-invariant nonstationary velocity correlation function with the transport coefficient. Here we obtain the relation between time-averaged diffusivity, usually recorded in single-particle tracking experiments, and the underlying scale-invariant velocity correlation function. The time-averaged mean-squared displacement is given by 〈δ2¯〉 ˜2 DνtβΔν -β , where t is the total measurement time and Δ is the lag time. Here ν is the anomalous diffusion exponent obtained from ensemble-averaged measurements 〈x2〉 ˜tν , while β ≥-1 marks the growth or decline of the kinetic energy 〈v2〉 ˜tβ . Thus, we establish a connection between exponents that can be read off the asymptotic properties of the velocity correlation function and similarly for the transport constant Dν. We demonstrate our results with nonstationary scale-invariant stochastic and deterministic models, thereby highlighting that systems with equivalent behavior in the ensemble average can differ strongly in their time average. If the averaged kinetic energy is finite, β =0 , the time scaling of 〈δ2¯〉 and 〈x2〉 are identical; however, the time-averaged transport coefficient Dν is not identical to the corresponding ensemble-averaged diffusion constant.
Creating "Intelligent" Ensemble Averages Using a Process-Based Framework
NASA Astrophysics Data System (ADS)
Baker, Noel; Taylor, Patrick
2014-05-01
The CMIP5 archive contains future climate projections from over 50 models provided by dozens of modeling centers from around the world. Individual model projections, however, are subject to biases created by structural model uncertainties. As a result, ensemble averaging of multiple models is used to add value to individual model projections and construct a consensus projection. Previous reports for the IPCC establish climate change projections based on an equal-weighted average of all model projections. However, individual models reproduce certain climate processes better than other models. Should models be weighted based on performance? Unequal ensemble averages have previously been constructed using a variety of mean state metrics. What metrics are most relevant for constraining future climate projections? This project develops a framework for systematically testing metrics in models to identify optimal metrics for unequal weighting multi-model ensembles. The intention is to produce improved ("intelligent") unequal-weight ensemble averages. A unique aspect of this project is the construction and testing of climate process-based model evaluation metrics. A climate process-based metric is defined as a metric based on the relationship between two physically related climate variables—e.g., outgoing longwave radiation and surface temperature. Several climate process metrics are constructed using high-quality Earth radiation budget data from NASA's Clouds and Earth's Radiant Energy System (CERES) instrument in combination with surface temperature data sets. It is found that regional values of tested quantities can vary significantly when comparing the equal-weighted ensemble average and an ensemble weighted using the process-based metric. Additionally, this study investigates the dependence of the metric weighting scheme on the climate state using a combination of model simulations including a non-forced preindustrial control experiment, historical simulations, and several radiative forcing Representative Concentration Pathway (RCP) scenarios. Ultimately, the goal of the framework is to advise better methods for ensemble averaging models and create better climate predictions.
NASA Astrophysics Data System (ADS)
Multsch, S.; Exbrayat, J.-F.; Kirby, M.; Viney, N. R.; Frede, H.-G.; Breuer, L.
2014-11-01
Irrigation agriculture plays an increasingly important role in food supply. Many evapotranspiration models are used today to estimate the water demand for irrigation. They consider different stages of crop growth by empirical crop coefficients to adapt evapotranspiration throughout the vegetation period. We investigate the importance of the model structural vs. model parametric uncertainty for irrigation simulations by considering six evapotranspiration models and five crop coefficient sets to estimate irrigation water requirements for growing wheat in the Murray-Darling Basin, Australia. The study is carried out using the spatial decision support system SPARE:WATER. We find that structural model uncertainty is far more important than model parametric uncertainty to estimate irrigation water requirement. Using the Reliability Ensemble Averaging (REA) technique, we are able to reduce the overall predictive model uncertainty by more than 10%. The exceedance probability curve of irrigation water requirements shows that a certain threshold, e.g. an irrigation water limit due to water right of 400 mm, would be less frequently exceeded in case of the REA ensemble average (45%) in comparison to the equally weighted ensemble average (66%). We conclude that multi-model ensemble predictions and sophisticated model averaging techniques are helpful in predicting irrigation demand and provide relevant information for decision making.
EMC Global Climate And Weather Modeling Branch Personnel
Comparison Statistics which includes: NCEP Raw and Bias-Corrected Ensemble Domain Averaged Bias NCEP Raw and Bias-Corrected Ensemble Domain Averaged Bias Reduction (Percents) CMC Raw and Bias-Corrected Control Forecast Domain Averaged Bias CMC Raw and Bias-Corrected Control Forecast Domain Averaged Bias Reduction
Simulating 3-D radiative transfer effects over the Sierra Nevada Mountains using WRF
DOE Office of Scientific and Technical Information (OSTI.GOV)
Gu, Y.; Liou, K. N.; Lee, W. -L.
2012-01-01
A surface solar radiation parameterization based on deviations between 3-D and conventional plane-parallel radiative transfer models has been incorporated into the Weather Research and Forecasting (WRF) model to understand the solar insolation over mountain/snow areas and to investigate the impact of the spatial and temporal distribution and variation of surface solar fluxes on land-surface processes. Using the Sierra-Nevada in the western United States as a testbed, we show that mountain effect could produce up to -50 to + 50 W m -2 deviations in the surface solar fluxes over the mountain areas, resulting in a temperature increase of up tomore » 1 °C on the sunny side. Upward surface sensible and latent heat fluxes are modulated accordingly to compensate for the change in surface solar fluxes. Snow water equivalent and surface albedo both show decreases on the sunny side of the mountains, indicating more snowmelt and hence reduced snow albedo associated with more solar insolation due to mountain effect. Soil moisture increases on the sunny side of the mountains due to enhanced snowmelt, while decreases on the shaded side. Substantial differences are found in the morning hours from 8–10 a.m. and in the afternoon around 3–5 p.m., while differences around noon and in the early morning and late afternoon are comparatively smaller. Variation in the surface energy balance can also affect atmospheric processes, such as cloud fields, through the modulation of vertical thermal structure. Negative changes of up to -40 g m -2 are found in the cloud water path, associated with reductions in the surface insolation over the cloud region. The day-averaged deviations in the surface solar flux are positive over the mountain areas and negative in the valleys, with a range between -12~12 W m -2. Changes in sensible and latent heat fluxes and surface skin temperature follow the solar insolation pattern. Differences in the domain-averaged diurnal variation over the Sierras show that the mountain area receives more solar insolation during early morning and late afternoon, resulting in enhanced upward sensible heat and latent heat fluxes from the surface and a corresponding increase in surface skin temperature. During the middle of the day, however, the surface insolation and heat fluxes show negative changes, indicating a cooling effect. Hence overall, the diurnal variations of surface temperature and surface fluxes in the Sierra-Nevada are reduced through the interactions of radiative transfer and mountains. Finally, the hourly differences of the surface solar insolation in higher elevated regions, however, show smaller magnitude in negative changes during the middle of the day and possibly more solar fluxes received during the whole day.« less
A method for determining the weak statistical stationarity of a random process
NASA Technical Reports Server (NTRS)
Sadeh, W. Z.; Koper, C. A., Jr.
1978-01-01
A method for determining the weak statistical stationarity of a random process is presented. The core of this testing procedure consists of generating an equivalent ensemble which approximates a true ensemble. Formation of an equivalent ensemble is accomplished through segmenting a sufficiently long time history of a random process into equal, finite, and statistically independent sample records. The weak statistical stationarity is ascertained based on the time invariance of the equivalent-ensemble averages. Comparison of these averages with their corresponding time averages over a single sample record leads to a heuristic estimate of the ergodicity of a random process. Specific variance tests are introduced for evaluating the statistical independence of the sample records, the time invariance of the equivalent-ensemble autocorrelations, and the ergodicity. Examination and substantiation of these procedures were conducted utilizing turbulent velocity signals.
Ensemble Averaged Probability Density Function (APDF) for Compressible Turbulent Reacting Flows
NASA Technical Reports Server (NTRS)
Shih, Tsan-Hsing; Liu, Nan-Suey
2012-01-01
In this paper, we present a concept of the averaged probability density function (APDF) for studying compressible turbulent reacting flows. The APDF is defined as an ensemble average of the fine grained probability density function (FG-PDF) with a mass density weighting. It can be used to exactly deduce the mass density weighted, ensemble averaged turbulent mean variables. The transport equation for APDF can be derived in two ways. One is the traditional way that starts from the transport equation of FG-PDF, in which the compressible Navier- Stokes equations are embedded. The resulting transport equation of APDF is then in a traditional form that contains conditional means of all terms from the right hand side of the Navier-Stokes equations except for the chemical reaction term. These conditional means are new unknown quantities that need to be modeled. Another way of deriving the transport equation of APDF is to start directly from the ensemble averaged Navier-Stokes equations. The resulting transport equation of APDF derived from this approach appears in a closed form without any need for additional modeling. The methodology of ensemble averaging presented in this paper can be extended to other averaging procedures: for example, the Reynolds time averaging for statistically steady flow and the Reynolds spatial averaging for statistically homogeneous flow. It can also be extended to a time or spatial filtering procedure to construct the filtered density function (FDF) for the large eddy simulation (LES) of compressible turbulent reacting flows.
NASA Astrophysics Data System (ADS)
Biasutti, M.; Voigt, A.; Scheff, J.
2016-12-01
TRACMIP consists of a set of five experiments performed by an ensemble of GCMs and conceived as a link in the hierarchy between the CFMIP/CMIP5 Aqua experiments and the CMIP5 comprehensive simulations. The basic configuration is an aquaplanet AGCM coupled to a slab ocean. By using interactive sea-surface temperatures and seasonally-varying insolation TRACMIP fills the gap between Aquaplanets with prescribed SSTs and fully-coupled realistic CMIP5 simulations. Adding to the basic Aquaplanet configuration a highly-idealized tropical continent allows the investigation of the role of zonal asymmetries in the dynamics of the ITCZ and of the source of the observed differences between land convection and monsoon circulations on one hand, and oceanic convection in the ITCZ and the Warm Pool on the other. Finally, by including both key forcings of the future (greenhouse gases) and of the Holocene (orbital changes in insolation), TRACMIP contributes to the "past to future (P2F)" efforts to connect the climate response to different forcings via a basic understanding of the mechanisms at play. TRACMIP includes the participation of both CMIP5 comprehensive climate models and a simplified model that neglects cloud and water-vapor radiative feedbacks, thus allowing a more direct connection between GCMs results and theoretical studies of tropical rain belt dynamics. We will present preliminary results from the ensemble, aiming to examine the mechanisms controlling tropical precipitation in the context of forced variability. First and foremost, we are interested in the largest forced variation: the annual cycle. We will draw out the similarities and the distinctions between the climatologies of the oceanic and continental rain bands, study the ways in which the two interact with each other, and investigate the extent to which established zonal-mean ITCZ frameworks contain information about regional rainfall characteristics. Second, we will investigate the response to quadrupling the CO2 concentration and to orbital changes, comparing the multi-model mean response and the inter-model scatter to responses in the CMIP5 ensemble, paying special attention to the way in which land responds differently than ocean and even, with its presence, modifies the response of the oceanic ITCZ to external forcings.
MSEBAG: a dynamic classifier ensemble generation based on `minimum-sufficient ensemble' and bagging
NASA Astrophysics Data System (ADS)
Chen, Lei; Kamel, Mohamed S.
2016-01-01
In this paper, we propose a dynamic classifier system, MSEBAG, which is characterised by searching for the 'minimum-sufficient ensemble' and bagging at the ensemble level. It adopts an 'over-generation and selection' strategy and aims to achieve a good bias-variance trade-off. In the training phase, MSEBAG first searches for the 'minimum-sufficient ensemble', which maximises the in-sample fitness with the minimal number of base classifiers. Then, starting from the 'minimum-sufficient ensemble', a backward stepwise algorithm is employed to generate a collection of ensembles. The objective is to create a collection of ensembles with a descending fitness on the data, as well as a descending complexity in the structure. MSEBAG dynamically selects the ensembles from the collection for the decision aggregation. The extended adaptive aggregation (EAA) approach, a bagging-style algorithm performed at the ensemble level, is employed for this task. EAA searches for the competent ensembles using a score function, which takes into consideration both the in-sample fitness and the confidence of the statistical inference, and averages the decisions of the selected ensembles to label the test pattern. The experimental results show that the proposed MSEBAG outperforms the benchmarks on average.
NASA Astrophysics Data System (ADS)
Multsch, S.; Exbrayat, J.-F.; Kirby, M.; Viney, N. R.; Frede, H.-G.; Breuer, L.
2015-04-01
Irrigation agriculture plays an increasingly important role in food supply. Many evapotranspiration models are used today to estimate the water demand for irrigation. They consider different stages of crop growth by empirical crop coefficients to adapt evapotranspiration throughout the vegetation period. We investigate the importance of the model structural versus model parametric uncertainty for irrigation simulations by considering six evapotranspiration models and five crop coefficient sets to estimate irrigation water requirements for growing wheat in the Murray-Darling Basin, Australia. The study is carried out using the spatial decision support system SPARE:WATER. We find that structural model uncertainty among reference ET is far more important than model parametric uncertainty introduced by crop coefficients. These crop coefficients are used to estimate irrigation water requirement following the single crop coefficient approach. Using the reliability ensemble averaging (REA) technique, we are able to reduce the overall predictive model uncertainty by more than 10%. The exceedance probability curve of irrigation water requirements shows that a certain threshold, e.g. an irrigation water limit due to water right of 400 mm, would be less frequently exceeded in case of the REA ensemble average (45%) in comparison to the equally weighted ensemble average (66%). We conclude that multi-model ensemble predictions and sophisticated model averaging techniques are helpful in predicting irrigation demand and provide relevant information for decision making.
Quantifying rapid changes in cardiovascular state with a moving ensemble average.
Cieslak, Matthew; Ryan, William S; Babenko, Viktoriya; Erro, Hannah; Rathbun, Zoe M; Meiring, Wendy; Kelsey, Robert M; Blascovich, Jim; Grafton, Scott T
2018-04-01
MEAP, the moving ensemble analysis pipeline, is a new open-source tool designed to perform multisubject preprocessing and analysis of cardiovascular data, including electrocardiogram (ECG), impedance cardiogram (ICG), and continuous blood pressure (BP). In addition to traditional ensemble averaging, MEAP implements a moving ensemble averaging method that allows for the continuous estimation of indices related to cardiovascular state, including cardiac output, preejection period, heart rate variability, and total peripheral resistance, among others. Here, we define the moving ensemble technique mathematically, highlighting its differences from fixed-window ensemble averaging. We describe MEAP's interface and features for signal processing, artifact correction, and cardiovascular-based fMRI analysis. We demonstrate the accuracy of MEAP's novel B point detection algorithm on a large collection of hand-labeled ICG waveforms. As a proof of concept, two subjects completed a series of four physical and cognitive tasks (cold pressor, Valsalva maneuver, video game, random dot kinetogram) on 3 separate days while ECG, ICG, and BP were recorded. Critically, the moving ensemble method reliably captures the rapid cyclical cardiovascular changes related to the baroreflex during the Valsalva maneuver and the classic cold pressor response. Cardiovascular measures were seen to vary considerably within repetitions of the same cognitive task for each individual, suggesting that a carefully designed paradigm could be used to capture fast-acting event-related changes in cardiovascular state. © 2017 Society for Psychophysiological Research.
Michael J. Erickson; Brian A. Colle; Joseph J. Charney
2012-01-01
The performance of a multimodel ensemble over the northeast United States is evaluated before and after applying bias correction and Bayesian model averaging (BMA). The 13-member Stony Brook University (SBU) ensemble at 0000 UTC is combined with the 21-member National Centers for Environmental Prediction (NCEP) Short-Range Ensemble Forecast (SREF) system at 2100 UTC....
Takahashi, Nobushige; Takahashi, Hidetoshi; Takahashi, Osamu; Ushijima, Ryosuke; Umebayashi, Rie; Nishikawa, Junji; Okajima, Yasutomo
2018-02-01
Spasticity is a common sequela of upper motor neuron pathology, such as cerebrovascular diseases and cerebral palsy. Intervention for spasticity of the ankle plantarflexors in physical therapy may include tone-inhibiting casting and/or orthoses for the ankle and foot. However, the physiological mechanism of tone reduction by such orthoses remains unclarified. To investigate the electrophysiologic effects of tone-inhibiting insoles in stroke subjects with hemiparesis by measuring changes in reciprocal Ia inhibition (RI) in the ankle plantarflexor. An interventional before-after study. Acute stroke unit or ambulatory rehabilitation clinic of a university hospital in Japan. Ten subjects (47-84 years) with hemiparesis and 10 healthy male control subjects (31-59 years) were recruited. RI of the spastic soleus in response to the electrical stimulation of the deep peroneal nerve was evaluated by stimulus-locked averaging of rectified electromyography (EMG) of the soleus while subjects were standing. The magnitude of RI, defined as the ratio of the lowest to the baseline amplitude of the rectified EMG at approximately 40 milliseconds after stimulation, was measured while subjects were standing with and without the tone-inhibiting insole on the hemiparesis side. Enhancement of EMG reduction with the tone-inhibiting insole was significant (P < .05) in the subjects with hemiparesis, whereas no significant changes were found in controls. Tone-inhibiting insoles enhanced RI of the soleus in subjects after stroke, which might enhance standing stability by reducing unfavorable ankle plantarflexion tone. III. Copyright © 2018 American Academy of Physical Medicine and Rehabilitation. Published by Elsevier Inc. All rights reserved.
The Weighted-Average Lagged Ensemble.
DelSole, T; Trenary, L; Tippett, M K
2017-11-01
A lagged ensemble is an ensemble of forecasts from the same model initialized at different times but verifying at the same time. The skill of a lagged ensemble mean can be improved by assigning weights to different forecasts in such a way as to maximize skill. If the forecasts are bias corrected, then an unbiased weighted lagged ensemble requires the weights to sum to one. Such a scheme is called a weighted-average lagged ensemble. In the limit of uncorrelated errors, the optimal weights are positive and decay monotonically with lead time, so that the least skillful forecasts have the least weight. In more realistic applications, the optimal weights do not always behave this way. This paper presents a series of analytic examples designed to illuminate conditions under which the weights of an optimal weighted-average lagged ensemble become negative or depend nonmonotonically on lead time. It is shown that negative weights are most likely to occur when the errors grow rapidly and are highly correlated across lead time. The weights are most likely to behave nonmonotonically when the mean square error is approximately constant over the range forecasts included in the lagged ensemble. An extreme example of the latter behavior is presented in which the optimal weights vanish everywhere except at the shortest and longest lead times.
NASA Astrophysics Data System (ADS)
Schunk, R. W.; Scherliess, L.; Eccles, V.; Gardner, L. C.; Sojka, J. J.; Zhu, L.; Pi, X.; Mannucci, A. J.; Komjathy, A.; Wang, C.; Rosen, G.
2016-12-01
As part of the NASA-NSF Space Weather Modeling Collaboration, we created a Multimodel Ensemble Prediction System (MEPS) for the Ionosphere-Thermosphere-Electrodynamics system that is based on Data Assimilation (DA) models. MEPS is composed of seven physics-based data assimilation models that cover the globe. Ensemble modeling can be conducted for the mid-low latitude ionosphere using the four GAIM data assimilation models, including the Gauss Markov (GM), Full Physics (FP), Band Limited (BL) and 4DVAR DA models. These models can assimilate Total Electron Content (TEC) from a constellation of satellites, bottom-side electron density profiles from digisondes, in situ plasma densities, occultation data and ultraviolet emissions. The four GAIM models were run for the March 16-17, 2013, geomagnetic storm period with the same data, but we also systematically added new data types and re-ran the GAIM models to see how the different data types affected the GAIM results, with the emphasis on elucidating differences in the underlying ionospheric dynamics and thermospheric coupling. Also, for each scenario the outputs from the four GAIM models were used to produce an ensemble mean for TEC, NmF2, and hmF2. A simple average of the models was used in the ensemble averaging to see if there was an improvement of the ensemble average over the individual models. For the scenarios considered, the ensemble average yielded better specifications than the individual GAIM models. The model differences and averages, and the consequent differences in ionosphere-thermosphere coupling and dynamics will be discussed.
An interplanetary magnetic field ensemble at 1 AU
NASA Technical Reports Server (NTRS)
Matthaeus, W. H.; Goldstein, M. L.; King, J. H.
1985-01-01
A method for calculation ensemble averages from magnetic field data is described. A data set comprising approximately 16 months of nearly continuous ISEE-3 magnetic field data is used in this study. Individual subintervals of this data, ranging from 15 hours to 15.6 days comprise the ensemble. The sole condition for including each subinterval in the averages is the degree to which it represents a weakly time-stationary process. Averages obtained by this method are appropriate for a turbulence description of the interplanetary medium. The ensemble average correlation length obtained from all subintervals is found to be 4.9 x 10 to the 11th cm. The average value of the variances of the magnetic field components are in the approximate ratio 8:9:10, where the third component is the local mean field direction. The correlation lengths and variances are found to have a systematic variation with subinterval duration, reflecting the important role of low-frequency fluctuations in the interplanetary medium.
Perceived Average Orientation Reflects Effective Gist of the Surface.
Cha, Oakyoon; Chong, Sang Chul
2018-03-01
The human ability to represent ensemble visual information, such as average orientation and size, has been suggested as the foundation of gist perception. To effectively summarize different groups of objects into the gist of a scene, observers should form ensembles separately for different groups, even when objects have similar visual features across groups. We hypothesized that the visual system utilizes perceptual groups characterized by spatial configuration and represents separate ensembles for different groups. Therefore, participants could not integrate ensembles of different perceptual groups on a task basis. We asked participants to determine the average orientation of visual elements comprising a surface with a contour situated inside. Although participants were asked to estimate the average orientation of all the elements, they ignored orientation signals embedded in the contour. This constraint may help the visual system to keep the visual features of occluding objects separate from those of the occluded objects.
Simulation studies of the fidelity of biomolecular structure ensemble recreation
NASA Astrophysics Data System (ADS)
Lätzer, Joachim; Eastwood, Michael P.; Wolynes, Peter G.
2006-12-01
We examine the ability of Bayesian methods to recreate structural ensembles for partially folded molecules from averaged data. Specifically we test the ability of various algorithms to recreate different transition state ensembles for folding proteins using a multiple replica simulation algorithm using input from "gold standard" reference ensembles that were first generated with a Gō-like Hamiltonian having nonpairwise additive terms. A set of low resolution data, which function as the "experimental" ϕ values, were first constructed from this reference ensemble. The resulting ϕ values were then treated as one would treat laboratory experimental data and were used as input in the replica reconstruction algorithm. The resulting ensembles of structures obtained by the replica algorithm were compared to the gold standard reference ensemble, from which those "data" were, in fact, obtained. It is found that for a unimodal transition state ensemble with a low barrier, the multiple replica algorithm does recreate the reference ensemble fairly successfully when no experimental error is assumed. The Kolmogorov-Smirnov test as well as principal component analysis show that the overlap of the recovered and reference ensembles is significantly enhanced when multiple replicas are used. Reduction of the multiple replica ensembles by clustering successfully yields subensembles with close similarity to the reference ensembles. On the other hand, for a high barrier transition state with two distinct transition state ensembles, the single replica algorithm only samples a few structures of one of the reference ensemble basins. This is due to the fact that the ϕ values are intrinsically ensemble averaged quantities. The replica algorithm with multiple copies does sample both reference ensemble basins. In contrast to the single replica case, the multiple replicas are constrained to reproduce the average ϕ values, but allow fluctuations in ϕ for each individual copy. These fluctuations facilitate a more faithful sampling of the reference ensemble basins. Finally, we test how robustly the reconstruction algorithm can function by introducing errors in ϕ comparable in magnitude to those suggested by some authors. In this circumstance we observe that the chances of ensemble recovery with the replica algorithm are poor using a single replica, but are improved when multiple copies are used. A multimodal transition state ensemble, however, turns out to be more sensitive to large errors in ϕ (if appropriately gauged) and attempts at successful recreation of the reference ensemble with simple replica algorithms can fall short.
Implicit ligand theory for relative binding free energies
NASA Astrophysics Data System (ADS)
Nguyen, Trung Hai; Minh, David D. L.
2018-03-01
Implicit ligand theory enables noncovalent binding free energies to be calculated based on an exponential average of the binding potential of mean force (BPMF)—the binding free energy between a flexible ligand and rigid receptor—over a precomputed ensemble of receptor configurations. In the original formalism, receptor configurations were drawn from or reweighted to the apo ensemble. Here we show that BPMFs averaged over a holo ensemble yield binding free energies relative to the reference ligand that specifies the ensemble. When using receptor snapshots from an alchemical simulation with a single ligand, the new statistical estimator outperforms the original.
Chakravorty, Arghya; Jia, Zhe; Li, Lin; Zhao, Shan; Alexov, Emil
2018-02-13
Typically, the ensemble average polar component of solvation energy (ΔG polar solv ) of a macromolecule is computed using molecular dynamics (MD) or Monte Carlo (MC) simulations to generate conformational ensemble and then single/rigid conformation solvation energy calculation is performed on each snapshot. The primary objective of this work is to demonstrate that Poisson-Boltzmann (PB)-based approach using a Gaussian-based smooth dielectric function for macromolecular modeling previously developed by us (Li et al. J. Chem. Theory Comput. 2013, 9 (4), 2126-2136) can reproduce that ensemble average (ΔG polar solv ) of a protein from a single structure. We show that the Gaussian-based dielectric model reproduces the ensemble average ΔG polar solv (⟨ΔG polar solv ⟩) from an energy-minimized structure of a protein regardless of the minimization environment (structure minimized in vacuo, implicit or explicit waters, or crystal structure); the best case, however, is when it is paired with an in vacuo-minimized structure. In other minimization environments (implicit or explicit waters or crystal structure), the traditional two-dielectric model can still be selected with which the model produces correct solvation energies. Our observations from this work reflect how the ability to appropriately mimic the motion of residues, especially the salt bridge residues, influences a dielectric model's ability to reproduce the ensemble average value of polar solvation free energy from a single in vacuo-minimized structure.
Ergodicity Breaking in Geometric Brownian Motion
NASA Astrophysics Data System (ADS)
Peters, O.; Klein, W.
2013-03-01
Geometric Brownian motion (GBM) is a model for systems as varied as financial instruments and populations. The statistical properties of GBM are complicated by nonergodicity, which can lead to ensemble averages exhibiting exponential growth while any individual trajectory collapses according to its time average. A common tactic for bringing time averages closer to ensemble averages is diversification. In this Letter, we study the effects of diversification using the concept of ergodicity breaking.
NASA Astrophysics Data System (ADS)
Efthimiou, G. C.; Andronopoulos, S.; Bartzis, J. G.
2018-02-01
One of the key issues of recent research on the dispersion inside complex urban environments is the ability to predict dosage-based parameters from the puff release of an airborne material from a point source in the atmospheric boundary layer inside the built-up area. The present work addresses the question of whether the computational fluid dynamics (CFD)-Reynolds-averaged Navier-Stokes (RANS) methodology can be used to predict ensemble-average dosage-based parameters that are related with the puff dispersion. RANS simulations with the ADREA-HF code were, therefore, performed, where a single puff was released in each case. The present method is validated against the data sets from two wind-tunnel experiments. In each experiment, more than 200 puffs were released from which ensemble-averaged dosage-based parameters were calculated and compared to the model's predictions. The performance of the model was evaluated using scatter plots and three validation metrics: fractional bias, normalized mean square error, and factor of two. The model presented a better performance for the temporal parameters (i.e., ensemble-average times of puff arrival, peak, leaving, duration, ascent, and descent) than for the ensemble-average dosage and peak concentration. The majority of the obtained values of validation metrics were inside established acceptance limits. Based on the obtained model performance indices, the CFD-RANS methodology as implemented in the code ADREA-HF is able to predict the ensemble-average temporal quantities related to transient emissions of airborne material in urban areas within the range of the model performance acceptance criteria established in the literature. The CFD-RANS methodology as implemented in the code ADREA-HF is also able to predict the ensemble-average dosage, but the dosage results should be treated with some caution; as in one case, the observed ensemble-average dosage was under-estimated slightly more than the acceptance criteria. Ensemble-average peak concentration was systematically underpredicted by the model to a degree higher than the allowable by the acceptance criteria, in 1 of the 2 wind-tunnel experiments. The model performance depended on the positions of the examined sensors in relation to the emission source and the buildings configuration. The work presented in this paper was carried out (partly) within the scope of COST Action ES1006 "Evaluation, improvement, and guidance for the use of local-scale emergency prediction and response tools for airborne hazards in built environments".
Karaminis, Themelis; Neil, Louise; Manning, Catherine; Turi, Marco; Fiorentini, Chiara; Burr, David; Pellicano, Elizabeth
2018-01-01
Ensemble perception, the ability to assess automatically the summary of large amounts of information presented in visual scenes, is available early in typical development. This ability might be compromised in autistic children, who are thought to present limitations in maintaining summary statistics representations for the recent history of sensory input. Here we examined ensemble perception of facial emotional expressions in 35 autistic children, 30 age- and ability-matched typical children and 25 typical adults. Participants received three tasks: a) an 'ensemble' emotion discrimination task; b) a baseline (single-face) emotion discrimination task; and c) a facial expression identification task. Children performed worse than adults on all three tasks. Unexpectedly, autistic and typical children were, on average, indistinguishable in their precision and accuracy on all three tasks. Computational modelling suggested that, on average, autistic and typical children used ensemble-encoding strategies to a similar extent; but ensemble perception was related to non-verbal reasoning abilities in autistic but not in typical children. Eye-movement data also showed no group differences in the way children attended to the stimuli. Our combined findings suggest that the abilities of autistic and typical children for ensemble perception of emotions are comparable on average. Copyright © 2017 The Author(s). Published by Elsevier Ltd.. All rights reserved.
Ensemble perception of emotions in autistic and typical children and adolescents.
Karaminis, Themelis; Neil, Louise; Manning, Catherine; Turi, Marco; Fiorentini, Chiara; Burr, David; Pellicano, Elizabeth
2017-04-01
Ensemble perception, the ability to assess automatically the summary of large amounts of information presented in visual scenes, is available early in typical development. This ability might be compromised in autistic children, who are thought to present limitations in maintaining summary statistics representations for the recent history of sensory input. Here we examined ensemble perception of facial emotional expressions in 35 autistic children, 30 age- and ability-matched typical children and 25 typical adults. Participants received three tasks: a) an 'ensemble' emotion discrimination task; b) a baseline (single-face) emotion discrimination task; and c) a facial expression identification task. Children performed worse than adults on all three tasks. Unexpectedly, autistic and typical children were, on average, indistinguishable in their precision and accuracy on all three tasks. Computational modelling suggested that, on average, autistic and typical children used ensemble-encoding strategies to a similar extent; but ensemble perception was related to non-verbal reasoning abilities in autistic but not in typical children. Eye-movement data also showed no group differences in the way children attended to the stimuli. Our combined findings suggest that the abilities of autistic and typical children for ensemble perception of emotions are comparable on average. Copyright © 2017 The Authors. Published by Elsevier Ltd.. All rights reserved.
Supermodeling With A Global Atmospheric Model
NASA Astrophysics Data System (ADS)
Wiegerinck, Wim; Burgers, Willem; Selten, Frank
2013-04-01
In weather and climate prediction studies it often turns out to be the case that the multi-model ensemble mean prediction has the best prediction skill scores. One possible explanation is that the major part of the model error is random and is averaged out in the ensemble mean. In the standard multi-model ensemble approach, the models are integrated in time independently and the predicted states are combined a posteriori. Recently an alternative ensemble prediction approach has been proposed in which the models exchange information during the simulation and synchronize on a common solution that is closer to the truth than any of the individual model solutions in the standard multi-model ensemble approach or a weighted average of these. This approach is called the super modeling approach (SUMO). The potential of the SUMO approach has been demonstrated in the context of simple, low-order, chaotic dynamical systems. The information exchange takes the form of linear nudging terms in the dynamical equations that nudge the solution of each model to the solution of all other models in the ensemble. With a suitable choice of the connection strengths the models synchronize on a common solution that is indeed closer to the true system than any of the individual model solutions without nudging. This approach is called connected SUMO. An alternative approach is to integrate a weighted averaged model, weighted SUMO. At each time step all models in the ensemble calculate the tendency, these tendencies are weighted averaged and the state is integrated one time step into the future with this weighted averaged tendency. It was shown that in case the connected SUMO synchronizes perfectly, the connected SUMO follows the weighted averaged trajectory and both approaches yield the same solution. In this study we pioneer both approaches in the context of a global, quasi-geostrophic, three-level atmosphere model that is capable of simulating quite realistically the extra-tropical circulation in the Northern Hemisphere winter.
Estimation of Uncertainties in the Global Distance Test (GDT_TS) for CASP Models.
Li, Wenlin; Schaeffer, R Dustin; Otwinowski, Zbyszek; Grishin, Nick V
2016-01-01
The Critical Assessment of techniques for protein Structure Prediction (or CASP) is a community-wide blind test experiment to reveal the best accomplishments of structure modeling. Assessors have been using the Global Distance Test (GDT_TS) measure to quantify prediction performance since CASP3 in 1998. However, identifying significant score differences between close models is difficult because of the lack of uncertainty estimations for this measure. Here, we utilized the atomic fluctuations caused by structure flexibility to estimate the uncertainty of GDT_TS scores. Structures determined by nuclear magnetic resonance are deposited as ensembles of alternative conformers that reflect the structural flexibility, whereas standard X-ray refinement produces the static structure averaged over time and space for the dynamic ensembles. To recapitulate the structural heterogeneous ensemble in the crystal lattice, we performed time-averaged refinement for X-ray datasets to generate structural ensembles for our GDT_TS uncertainty analysis. Using those generated ensembles, our study demonstrates that the time-averaged refinements produced structure ensembles with better agreement with the experimental datasets than the averaged X-ray structures with B-factors. The uncertainty of the GDT_TS scores, quantified by their standard deviations (SDs), increases for scores lower than 50 and 70, with maximum SDs of 0.3 and 1.23 for X-ray and NMR structures, respectively. We also applied our procedure to the high accuracy version of GDT-based score and produced similar results with slightly higher SDs. To facilitate score comparisons by the community, we developed a user-friendly web server that produces structure ensembles for NMR and X-ray structures and is accessible at http://prodata.swmed.edu/SEnCS. Our work helps to identify the significance of GDT_TS score differences, as well as to provide structure ensembles for estimating SDs of any scores.
Creating "Intelligent" Climate Model Ensemble Averages Using a Process-Based Framework
NASA Astrophysics Data System (ADS)
Baker, N. C.; Taylor, P. C.
2014-12-01
The CMIP5 archive contains future climate projections from over 50 models provided by dozens of modeling centers from around the world. Individual model projections, however, are subject to biases created by structural model uncertainties. As a result, ensemble averaging of multiple models is often used to add value to model projections: consensus projections have been shown to consistently outperform individual models. Previous reports for the IPCC establish climate change projections based on an equal-weighted average of all model projections. However, certain models reproduce climate processes better than other models. Should models be weighted based on performance? Unequal ensemble averages have previously been constructed using a variety of mean state metrics. What metrics are most relevant for constraining future climate projections? This project develops a framework for systematically testing metrics in models to identify optimal metrics for unequal weighting multi-model ensembles. A unique aspect of this project is the construction and testing of climate process-based model evaluation metrics. A climate process-based metric is defined as a metric based on the relationship between two physically related climate variables—e.g., outgoing longwave radiation and surface temperature. Metrics are constructed using high-quality Earth radiation budget data from NASA's Clouds and Earth's Radiant Energy System (CERES) instrument and surface temperature data sets. It is found that regional values of tested quantities can vary significantly when comparing weighted and unweighted model ensembles. For example, one tested metric weights the ensemble by how well models reproduce the time-series probability distribution of the cloud forcing component of reflected shortwave radiation. The weighted ensemble for this metric indicates lower simulated precipitation (up to .7 mm/day) in tropical regions than the unweighted ensemble: since CMIP5 models have been shown to overproduce precipitation, this result could indicate that the metric is effective in identifying models which simulate more realistic precipitation. Ultimately, the goal of the framework is to identify performance metrics for advising better methods for ensemble averaging models and create better climate predictions.
Ensemble coding remains accurate under object and spatial visual working memory load.
Epstein, Michael L; Emmanouil, Tatiana A
2017-10-01
A number of studies have provided evidence that the visual system statistically summarizes large amounts of information that would exceed the limitations of attention and working memory (ensemble coding). However the necessity of working memory resources for ensemble coding has not yet been tested directly. In the current study, we used a dual task design to test the effect of object and spatial visual working memory load on size averaging accuracy. In Experiment 1, we tested participants' accuracy in comparing the mean size of two sets under various levels of object visual working memory load. Although the accuracy of average size judgments depended on the difference in mean size between the two sets, we found no effect of working memory load. In Experiment 2, we tested the same average size judgment while participants were under spatial visual working memory load, again finding no effect of load on averaging accuracy. Overall our results reveal that ensemble coding can proceed unimpeded and highly accurately under both object and spatial visual working memory load, providing further evidence that ensemble coding reflects a basic perceptual process distinct from that of individual object processing.
The Asian monsoon over the past 640,000 years and ice age terminations.
Cheng, Hai; Edwards, R Lawrence; Sinha, Ashish; Spötl, Christoph; Yi, Liang; Chen, Shitao; Kelly, Megan; Kathayat, Gayatri; Wang, Xianfeng; Li, Xianglei; Kong, Xinggong; Wang, Yongjin; Ning, Youfeng; Zhang, Haiwei
2016-06-30
Oxygen isotope records from Chinese caves characterize changes in both the Asian monsoon and global climate. Here, using our new speleothem data, we extend the Chinese record to cover the full uranium/thorium dating range, that is, the past 640,000 years. The record's length and temporal precision allow us to test the idea that insolation changes caused by the Earth's precession drove the terminations of each of the last seven ice ages as well as the millennia-long intervals of reduced monsoon rainfall associated with each of the terminations. On the basis of our record's timing, the terminations are separated by four or five precession cycles, supporting the idea that the '100,000-year' ice age cycle is an average of discrete numbers of precession cycles. Furthermore, the suborbital component of monsoon rainfall variability exhibits power in both the precession and obliquity bands, and is nearly in anti-phase with summer boreal insolation. These observations indicate that insolation, in part, sets the pace of the occurrence of millennial-scale events, including those associated with terminations and 'unfinished terminations'.
Equilibrium energy spectrum of point vortex motion with remarks on ensemble choice and ergodicity
NASA Astrophysics Data System (ADS)
Esler, J. G.
2017-01-01
The dynamics and statistical mechanics of N chaotically evolving point vortices in the doubly periodic domain are revisited. The selection of the correct microcanonical ensemble for the system is first investigated. The numerical results of Weiss and McWilliams [Phys. Fluids A 3, 835 (1991), 10.1063/1.858014], who argued that the point vortex system with N =6 is nonergodic because of an apparent discrepancy between ensemble averages and dynamical time averages, are shown to be due to an incorrect ensemble definition. When the correct microcanonical ensemble is sampled, accounting for the vortex momentum constraint, time averages obtained from direct numerical simulation agree with ensemble averages within the sampling error of each calculation, i.e., there is no numerical evidence for nonergodicity. Further, in the N →∞ limit it is shown that the vortex momentum no longer constrains the long-time dynamics and therefore that the correct microcanonical ensemble for statistical mechanics is that associated with the entire constant energy hypersurface in phase space. Next, a recently developed technique is used to generate an explicit formula for the density of states function for the system, including for arbitrary distributions of vortex circulations. Exact formulas for the equilibrium energy spectrum, and for the probability density function of the energy in each Fourier mode, are then obtained. Results are compared with a series of direct numerical simulations with N =50 and excellent agreement is found, confirming the relevance of the results for interpretation of quantum and classical two-dimensional turbulence.
Ensemble coding of face identity is present but weaker in congenital prosopagnosia.
Robson, Matthew K; Palermo, Romina; Jeffery, Linda; Neumann, Markus F
2018-03-01
Individuals with congenital prosopagnosia (CP) are impaired at identifying individual faces but do not appear to show impairments in extracting the average identity from a group of faces (known as ensemble coding). However, possible deficits in ensemble coding in a previous study (CPs n = 4) may have been masked because CPs relied on pictorial (image) cues rather than identity cues. Here we asked whether a larger sample of CPs (n = 11) would show intact ensemble coding of identity when availability of image cues was minimised. Participants viewed a "set" of four faces and then judged whether a subsequent individual test face, either an exemplar or a "set average", was in the preceding set. Ensemble coding occurred when matching (vs. mismatching) averages were mistakenly endorsed as set members. We assessed both image- and identity-based ensemble coding, by varying whether test faces were either the same or different images of the identities in the set. CPs showed significant ensemble coding in both tasks, indicating that their performance was independent of image cues. As a group, CPs' ensemble coding was weaker than controls in both tasks, consistent with evidence that perceptual processing of face identity is disrupted in CP. This effect was driven by CPs (n= 3) who, in addition to having impaired face memory, also performed particularly poorly on a measure of face perception (CFPT). Future research, using larger samples, should examine whether deficits in ensemble coding may be restricted to CPs who also have substantial face perception deficits. Copyright © 2018 Elsevier Ltd. All rights reserved.
Bayesian ensemble refinement by replica simulations and reweighting.
Hummer, Gerhard; Köfinger, Jürgen
2015-12-28
We describe different Bayesian ensemble refinement methods, examine their interrelation, and discuss their practical application. With ensemble refinement, the properties of dynamic and partially disordered (bio)molecular structures can be characterized by integrating a wide range of experimental data, including measurements of ensemble-averaged observables. We start from a Bayesian formulation in which the posterior is a functional that ranks different configuration space distributions. By maximizing this posterior, we derive an optimal Bayesian ensemble distribution. For discrete configurations, this optimal distribution is identical to that obtained by the maximum entropy "ensemble refinement of SAXS" (EROS) formulation. Bayesian replica ensemble refinement enhances the sampling of relevant configurations by imposing restraints on averages of observables in coupled replica molecular dynamics simulations. We show that the strength of the restraints should scale linearly with the number of replicas to ensure convergence to the optimal Bayesian result in the limit of infinitely many replicas. In the "Bayesian inference of ensembles" method, we combine the replica and EROS approaches to accelerate the convergence. An adaptive algorithm can be used to sample directly from the optimal ensemble, without replicas. We discuss the incorporation of single-molecule measurements and dynamic observables such as relaxation parameters. The theoretical analysis of different Bayesian ensemble refinement approaches provides a basis for practical applications and a starting point for further investigations.
Bayesian ensemble refinement by replica simulations and reweighting
NASA Astrophysics Data System (ADS)
Hummer, Gerhard; Köfinger, Jürgen
2015-12-01
We describe different Bayesian ensemble refinement methods, examine their interrelation, and discuss their practical application. With ensemble refinement, the properties of dynamic and partially disordered (bio)molecular structures can be characterized by integrating a wide range of experimental data, including measurements of ensemble-averaged observables. We start from a Bayesian formulation in which the posterior is a functional that ranks different configuration space distributions. By maximizing this posterior, we derive an optimal Bayesian ensemble distribution. For discrete configurations, this optimal distribution is identical to that obtained by the maximum entropy "ensemble refinement of SAXS" (EROS) formulation. Bayesian replica ensemble refinement enhances the sampling of relevant configurations by imposing restraints on averages of observables in coupled replica molecular dynamics simulations. We show that the strength of the restraints should scale linearly with the number of replicas to ensure convergence to the optimal Bayesian result in the limit of infinitely many replicas. In the "Bayesian inference of ensembles" method, we combine the replica and EROS approaches to accelerate the convergence. An adaptive algorithm can be used to sample directly from the optimal ensemble, without replicas. We discuss the incorporation of single-molecule measurements and dynamic observables such as relaxation parameters. The theoretical analysis of different Bayesian ensemble refinement approaches provides a basis for practical applications and a starting point for further investigations.
Viscoelastic shoe insoles: their use in aerobic dancing.
Clark, J E; Scott, S G; Mingle, M
1989-01-01
To determine whether use of viscoelastic insoles would significantly decrease the frequency of musculoskeletal overuse injury in aerobic dancers, 139 high-level aerobic dancers were divided randomly into two groups. The control group received placebo foam insoles and test subjects were fitted with viscoelastic insoles. Subjects used these insoles during dance class for 15 weeks. Injury rates were low in both groups and no statistical difference was found. Pain syndromes were fewer in the group using viscoelastic insoles, but the difference was not statistically significant. About a third of dancers fitted with viscoelastic insoles and a tenth of placebo insert wearers found that the insoles made their shoes too tight to be comfortable. No conclusion can be drawn on whether shock-absorbing insoles decrease injuries from aerobic dancing, but use of viscoelastic insoles may improve comfort and provide pain relief for some high-level aerobic dancers if proper fit is achieved.
Decadal climate prediction in the large ensemble limit
NASA Astrophysics Data System (ADS)
Yeager, S. G.; Rosenbloom, N. A.; Strand, G.; Lindsay, K. T.; Danabasoglu, G.; Karspeck, A. R.; Bates, S. C.; Meehl, G. A.
2017-12-01
In order to quantify the benefits of initialization for climate prediction on decadal timescales, two parallel sets of historical simulations are required: one "initialized" ensemble that incorporates observations of past climate states and one "uninitialized" ensemble whose internal climate variations evolve freely and without synchronicity. In the large ensemble limit, ensemble averaging isolates potentially predictable forced and internal variance components in the "initialized" set, but only the forced variance remains after averaging the "uninitialized" set. The ensemble size needed to achieve this variance decomposition, and to robustly distinguish initialized from uninitialized decadal predictions, remains poorly constrained. We examine a large ensemble (LE) of initialized decadal prediction (DP) experiments carried out using the Community Earth System Model (CESM). This 40-member CESM-DP-LE set of experiments represents the "initialized" complement to the CESM large ensemble of 20th century runs (CESM-LE) documented in Kay et al. (2015). Both simulation sets share the same model configuration, historical radiative forcings, and large ensemble sizes. The twin experiments afford an unprecedented opportunity to explore the sensitivity of DP skill assessment, and in particular the skill enhancement associated with initialization, to ensemble size. This talk will highlight the benefits of a large ensemble size for initialized predictions of seasonal climate over land in the Atlantic sector as well as predictions of shifts in the likelihood of climate extremes that have large societal impact.
Thermodynamics and Human Population
ERIC Educational Resources Information Center
Cordry, Sean M.
2010-01-01
This paper discusses a Fermi-problem exercise through which I take students in several of my college courses. Students work in teams, determining the average daily Caloric needs per person. Then they use insolation values to determine the size of a collection area needed to absorb the previously determined daily energy requirements. Adjustments to…
Single-ping ADCP measurements in the Strait of Gibraltar
NASA Astrophysics Data System (ADS)
Sammartino, Simone; García Lafuente, Jesús; Naranjo, Cristina; Sánchez Garrido, José Carlos; Sánchez Leal, Ricardo
2016-04-01
In most Acoustic Doppler Current Profiler (ADCP) user manuals, it is widely recommended to apply ensemble averaging of the single-pings measurements, in order to obtain reliable observations of the current speed. The random error related to the single-ping measurement is typically too high to be used directly, while the averaging operation reduces the ensemble error of a factor of approximately √N, with N the number of averaged pings. A 75 kHz ADCP moored in the western exit of the Strait of Gibraltar, included in the long-term monitoring of the Mediterranean outflow, has recently served as test setup for a different approach to current measurements. The ensemble averaging has been disabled, while maintaining the internal coordinate conversion made by the instrument, and a series of single-ping measurements has been collected every 36 seconds during a period of approximately 5 months. The huge amount of data has been fluently handled by the instrument, and no abnormal battery consumption has been recorded. On the other hand a long and unique series of very high frequency current measurements has been collected. Results of this novel approach have been exploited in a dual way: from a statistical point of view, the availability of single-ping measurements allows a real estimate of the (a posteriori) ensemble average error of both current and ancillary variables. While the theoretical random error for horizontal velocity is estimated a priori as ˜2 cm s-1 for a 50 pings ensemble, the value obtained by the a posteriori averaging is ˜15 cm s-1, with an asymptotical behavior starting from an averaging size of 10 pings per ensemble. This result suggests the presence of external sources of random error (e.g.: turbulence), of higher magnitude than the internal sources (ADCP intrinsic precision), which cannot be reduced by the ensemble averaging. On the other hand, although the instrumental configuration is clearly not suitable for a precise estimation of turbulent parameters, some hints of the turbulent structure of the flow can be obtained by the empirical computation of zonal Reynolds stress (along the predominant direction of the current) and rate of production and dissipation of turbulent kinetic energy. All the parameters show a clear correlation with tidal fluctuations of the current, with maximum values coinciding with flood tides, during the maxima of the outflow Mediterranean current.
Toda, Y
2001-06-01
We assessed the clinical efficacy of a lateral wedged insole with elastic fixation of the subtalar joint for conservative treatment of osteoarthritis of the knee. Novel insoles with elastic subtalar fixation (fixed insole) and a traditional shoe insert wedged insoles (inserted insole) were prepared. Seventy-one new female outpatients with osteoarthritis of the knee (knee OA) were treated with wedged insoles for 3 months. Randomization was performed according to birth date. The Severity Index of Lequesne, et al at the final assessment was compared with that at baseline in both the inserted and fixed insole groups. There were 37 participants in the inserted group and 34 participants in the fixed insole group. Regarding discomfort during nocturnal bed rest, 21 out of 34 (61%) participants were positive at the baseline assessment, however, only 8 out of 34 (27%) were positive at the final assessment in the fixed insole group (P = 0.033). In the fixed insole group, the number of participants complained immediate pain after walking was decreased from 28 (82%) at the baseline assessment to 17 (50%) at the final assessments (P = 0.0104). These significant differences were not found in the group with the inserted insole. Thus, clinical efficacy of lateral wedged insole may be emphasized with elastic fixation of the subtalar joint.
Interpolation of property-values between electron numbers is inconsistent with ensemble averaging
DOE Office of Scientific and Technical Information (OSTI.GOV)
Miranda-Quintana, Ramón Alain; Department of Chemistry and Chemical Biology, McMaster University, Hamilton, Ontario L8S 4M1; Ayers, Paul W.
2016-06-28
In this work we explore the physical foundations of models that study the variation of the ground state energy with respect to the number of electrons (E vs. N models), in terms of general grand-canonical (GC) ensemble formulations. In particular, we focus on E vs. N models that interpolate the energy between states with integer number of electrons. We show that if the interpolation of the energy corresponds to a GC ensemble, it is not differentiable. Conversely, if the interpolation is smooth, then it cannot be formulated as any GC ensemble. This proves that interpolation of electronic properties between integermore » electron numbers is inconsistent with any form of ensemble averaging. This emphasizes the role of derivative discontinuities and the critical role of a subsystem’s surroundings in determining its properties.« less
The random coding bound is tight for the average code.
NASA Technical Reports Server (NTRS)
Gallager, R. G.
1973-01-01
The random coding bound of information theory provides a well-known upper bound to the probability of decoding error for the best code of a given rate and block length. The bound is constructed by upperbounding the average error probability over an ensemble of codes. The bound is known to give the correct exponential dependence of error probability on block length for transmission rates above the critical rate, but it gives an incorrect exponential dependence at rates below a second lower critical rate. Here we derive an asymptotic expression for the average error probability over the ensemble of codes used in the random coding bound. The result shows that the weakness of the random coding bound at rates below the second critical rate is due not to upperbounding the ensemble average, but rather to the fact that the best codes are much better than the average at low rates.
On the Likely Utility of Hybrid Weights Optimized for Variances in Hybrid Error Covariance Models
NASA Astrophysics Data System (ADS)
Satterfield, E.; Hodyss, D.; Kuhl, D.; Bishop, C. H.
2017-12-01
Because of imperfections in ensemble data assimilation schemes, one cannot assume that the ensemble covariance is equal to the true error covariance of a forecast. Previous work demonstrated how information about the distribution of true error variances given an ensemble sample variance can be revealed from an archive of (observation-minus-forecast, ensemble-variance) data pairs. Here, we derive a simple and intuitively compelling formula to obtain the mean of this distribution of true error variances given an ensemble sample variance from (observation-minus-forecast, ensemble-variance) data pairs produced by a single run of a data assimilation system. This formula takes the form of a Hybrid weighted average of the climatological forecast error variance and the ensemble sample variance. Here, we test the extent to which these readily obtainable weights can be used to rapidly optimize the covariance weights used in Hybrid data assimilation systems that employ weighted averages of static covariance models and flow-dependent ensemble based covariance models. Univariate data assimilation and multi-variate cycling ensemble data assimilation are considered. In both cases, it is found that our computationally efficient formula gives Hybrid weights that closely approximate the optimal weights found through the simple but computationally expensive process of testing every plausible combination of weights.
Pasin Neto, Hugo; Grecco, Luanda André Collange; Ferreira, Luis Alfredo Braun; Duarte, Natália Almeida Carvalho; Galli, Manuela; Oliveira, Claudia Santos
2017-10-01
The aim of the present study was to assess the effect of postural insoles on gait performance in children with Cerebral Palsy (CP). Twenty four children between four and 12 years of age were randomly allocated either the control group (n = 12) or experimental group (n = 12). The control group used placebo insoles and the experimental group used postural insoles. Three-dimensional gait analysis was performed under three conditions: barefoot, in shoes and in shoes with insoles. Three evaluations were carried out: 1)immediately following placement of the insoles; 2)after three months of insole use; and 3)one month after suspending insole use. Regarding the immediate effects and after three months use of insole, significant improvements in gait velocity and cadence were found in the experimental group, along with an increase in foot dorsiflexion, a reduction in knee flexion and a reduction in internal rotation. Conversely, these changes were not maintained in the third assessment, one month after withdrawal of the insoles. The use of postural insoles led to improvements in gait performance in children with CP. Copyright © 2017 Elsevier Ltd. All rights reserved.
How Arch Support Insoles Help Persons with Flatfoot on Uphill and Downhill Walking.
Huang, Yu-Ping; Kim, Kwantae; Song, Chen-Yi; Chen, Yat-Hon; Peng, Hsien-Te
2017-01-01
The main purpose of this study was to investigate the effect of arch support insoles on uphill and downhill walking of persons with flatfoot. Sixteen healthy college students with flatfoot were recruited in this study. Their heart rate, peak oxygen uptake (VO 2 ), and median frequency (MDF) of surface electromyogram were recorded and analyzed. Nonparametric Wilcoxon signed-rank test was used for statistical analysis. The main results were as follows: (a) peak VO 2 significantly decreased with arch support insoles compared with flat insoles during uphill and downhill walking (arch support insole versus flat insole: uphill walking, 20.7 ± 3.6 versus 31.6 ± 5.5; downhill walking, 10.9 ± 2.3 versus 16.9 ± 4.2); (b) arch support insoles could reduce the fatigue of the rectus femoris muscle during downhill walking (MDF slope of arch support insole: 0.03 ± 1.17, flat insole: -6.56 ± 23.07); (c) insole hardness would increase not only the physical sensory input but also the fatigue of lower-limb muscles particularly for the rectus femoris muscle (MDF slope of arch support insole: -1.90 ± 1.60, flat insole: -0.83 ± 1.10) in persons with flatfoot during uphill walking. The research results show that arch support insoles could effectively be applied to persons with flatfoot to aid them during uphill and downhill walking.
Ensemble-Based Parameter Estimation in a Coupled GCM Using the Adaptive Spatial Average Method
Liu, Y.; Liu, Z.; Zhang, S.; ...
2014-05-29
Ensemble-based parameter estimation for a climate model is emerging as an important topic in climate research. And for a complex system such as a coupled ocean–atmosphere general circulation model, the sensitivity and response of a model variable to a model parameter could vary spatially and temporally. An adaptive spatial average (ASA) algorithm is proposed to increase the efficiency of parameter estimation. Refined from a previous spatial average method, the ASA uses the ensemble spread as the criterion for selecting “good” values from the spatially varying posterior estimated parameter values; these good values are then averaged to give the final globalmore » uniform posterior parameter. In comparison with existing methods, the ASA parameter estimation has a superior performance: faster convergence and enhanced signal-to-noise ratio.« less
Application Bayesian Model Averaging method for ensemble system for Poland
NASA Astrophysics Data System (ADS)
Guzikowski, Jakub; Czerwinska, Agnieszka
2014-05-01
The aim of the project is to evaluate methods for generating numerical ensemble weather prediction using a meteorological data from The Weather Research & Forecasting Model and calibrating this data by means of Bayesian Model Averaging (WRF BMA) approach. We are constructing height resolution short range ensemble forecasts using meteorological data (temperature) generated by nine WRF's models. WRF models have 35 vertical levels and 2.5 km x 2.5 km horizontal resolution. The main emphasis is that the used ensemble members has a different parameterization of the physical phenomena occurring in the boundary layer. To calibrate an ensemble forecast we use Bayesian Model Averaging (BMA) approach. The BMA predictive Probability Density Function (PDF) is a weighted average of predictive PDFs associated with each individual ensemble member, with weights that reflect the member's relative skill. For test we chose a case with heat wave and convective weather conditions in Poland area from 23th July to 1st August 2013. From 23th July to 29th July 2013 temperature oscillated below or above 30 Celsius degree in many meteorology stations and new temperature records were added. During this time the growth of the hospitalized patients with cardiovascular system problems was registered. On 29th July 2013 an advection of moist tropical air masses was recorded in the area of Poland causes strong convection event with mesoscale convection system (MCS). MCS caused local flooding, damage to the transport infrastructure, destroyed buildings, trees and injuries and direct threat of life. Comparison of the meteorological data from ensemble system with the data recorded on 74 weather stations localized in Poland is made. We prepare a set of the model - observations pairs. Then, the obtained data from single ensemble members and median from WRF BMA system are evaluated on the basis of the deterministic statistical error Root Mean Square Error (RMSE), Mean Absolute Error (MAE). To evaluation probabilistic data The Brier Score (BS) and Continuous Ranked Probability Score (CRPS) were used. Finally comparison between BMA calibrated data and data from ensemble members will be displayed.
Characterizing RNA ensembles from NMR data with kinematic models
Fonseca, Rasmus; Pachov, Dimitar V.; Bernauer, Julie; van den Bedem, Henry
2014-01-01
Functional mechanisms of biomolecules often manifest themselves precisely in transient conformational substates. Researchers have long sought to structurally characterize dynamic processes in non-coding RNA, combining experimental data with computer algorithms. However, adequate exploration of conformational space for these highly dynamic molecules, starting from static crystal structures, remains challenging. Here, we report a new conformational sampling procedure, KGSrna, which can efficiently probe the native ensemble of RNA molecules in solution. We found that KGSrna ensembles accurately represent the conformational landscapes of 3D RNA encoded by NMR proton chemical shifts. KGSrna resolves motionally averaged NMR data into structural contributions; when coupled with residual dipolar coupling data, a KGSrna ensemble revealed a previously uncharacterized transient excited state of the HIV-1 trans-activation response element stem–loop. Ensemble-based interpretations of averaged data can aid in formulating and testing dynamic, motion-based hypotheses of functional mechanisms in RNAs with broad implications for RNA engineering and therapeutic intervention. PMID:25114056
Development of a real time activity monitoring Android application utilizing SmartStep.
Hegde, Nagaraj; Melanson, Edward; Sazonov, Edward
2016-08-01
Footwear based activity monitoring systems are becoming popular in academic research as well as consumer industry segments. In our previous work, we had presented developmental aspects of an insole based activity and gait monitoring system-SmartStep, which is a socially acceptable, fully wireless and versatile insole. The present work describes the development of an Android application that captures the SmartStep data wirelessly over Bluetooth Low energy (BLE), computes features on the received data, runs activity classification algorithms and provides real time feedback. The development of activity classification methods was based on the the data from a human study involving 4 participants. Participants were asked to perform activities of sitting, standing, walking, and cycling while they wore SmartStep insole system. Multinomial Logistic Discrimination (MLD) was utilized in the development of machine learning model for activity prediction. The resulting classification model was implemented in an Android Smartphone. The Android application was benchmarked for power consumption and CPU loading. Leave one out cross validation resulted in average accuracy of 96.9% during model training phase. The Android application for real time activity classification was tested on a human subject wearing SmartStep resulting in testing accuracy of 95.4%.
Kido, Masamitsu; Ikoma, Kazuya; Hara, Yusuke; Imai, Kan; Maki, Masahiro; Ikeda, Takumi; Fujiwara, Hiroyoshi; Tokunaga, Daisaku; Inoue, Nozomu; Kubo, Toshikazu
2014-12-01
Insoles are frequently used in orthotic therapy as the standard conservative treatment for symptomatic flatfoot deformity to rebuild the arch and stabilize the foot. However, the effectiveness of therapeutic insoles remains unclear. In this study, we assessed the effectiveness of therapeutic insoles for flatfoot deformity using subject-based three-dimensional (3D) computed tomography (CT) models by evaluating the load responses of the bones in the medial longitudinal arch in vivo in 3D. We studied eight individuals (16 feet) with mild flatfoot deformity. CT scans were performed on both feet under non-loaded and full-body-loaded conditions, first with accessory insoles and then with therapeutic insoles under the same conditions. Three-dimensional CT models were constructed for the tibia and the tarsal and metatarsal bones of the medial longitudinal arch (i.e., first metatarsal bone, cuneiforms, navicular, talus, and calcaneus). The rotational angles between the tarsal bones were calculated under loading with accessory insoles or therapeutic insoles and compared. Compared with the accessory insoles, the therapeutic insoles significantly suppressed the eversion of the talocalcaneal joint. This is the first study to precisely verify the usefulness of therapeutic insoles (arch support and inner wedges) in vivo. Copyright © 2014 Elsevier Ltd. All rights reserved.
Sarikhani, Ali; Motalebizadeh, Abbas; Kamali Doost Azad, Babak
2016-01-01
The insole shape and the resulting plantar stress distribution have a pivotal impact on overall health. In this paper, by Finite Element Method, maximum stress value and stress distribution of plantar were studied for different insoles designs, which are the flat surface and the custom-molded (conformal) surface. Moreover, insole thickness, heel's height, and different materials were used to minimize the maximum stress and achieve the most uniform stress distribution. The foot shape and its details used in this paper were imported from online CT-Scan images. Results show that the custom-molded insole reduced maximum stress 40% more than the flat surface insole. Upon increase of thickness in both insole types, stress distribution becomes more uniform and maximum stress value decreases up to 10%; however, increase of thickness becomes ineffective above a threshold of 1 cm. By increasing heel height (degree of insole), maximum stress moves from heel to toes and becomes more uniform. Therefore, this scenario is very helpful for control of stress in 0.2° to 0.4° degrees for custom-molded insole and over 1° for flat insole. By changing the material of the insole, the value of maximum stress remains nearly constant. The custom-molded (conformal) insole which has 0.5 to 1 cm thickness and 0.2° to 0.4° degrees is found to be the most compatible form for foot. PMID:27843284
Lucas-Cuevas, Angel Gabriel; Pérez-Soriano, Pedro; Llana-Belloch, Salvador; Macián-Romero, Cecili; Sánchez-Zuriaga, Daniel
2014-01-01
Controversy exists whether custom-made insoles are more effective in reducing plantar loading compared to prefabricated insoles. Forty recreational athletes ran using custom-made, prefabricated, and the original insoles of their running shoes, at rest and after a fatigue run. Contact time, stride rate, and plantar loading parameters were measured. Neither the insole conditions nor the fatigue state modified contact time and stride rate. Addressing prevention of running injuries, post-fatigue loading values are of great interest. Custom-made insoles reduced the post-fatigue loading under the hallux (92 vs. 130 kPa, P < 0.05), medial midfoot (70 vs. 105 kPa, P < 0.01), and lateral midfoot (62 vs 96 kPa, P < 0.01). Prefabricated insoles provoked reductions in post-fatigue loading under the toes (120 vs. 175 kPa, P < 0.05), medial midfoot (71 vs. 105 kPa, P < 0.01), and lateral midfoot (68 vs. 96 kPa, P < 0.01). Regarding both study insoles, custom-made insoles reduced by 31% and 54% plantar loading under the medial and lateral heel compared to the prefabricated insoles. Finally, fatigue state did not influence plantar loading regardless the insole condition. In long-distance races, even a slight reduction in plantar loading at each foot strike may suppose a significant decrease in the overall stress experienced by the foot, and therefore the use of insoles may be an important protective mechanism for plantar overloading.
Determination of ensemble-average pairwise root mean-square deviation from experimental B-factors.
Kuzmanic, Antonija; Zagrovic, Bojan
2010-03-03
Root mean-square deviation (RMSD) after roto-translational least-squares fitting is a measure of global structural similarity of macromolecules used commonly. On the other hand, experimental x-ray B-factors are used frequently to study local structural heterogeneity and dynamics in macromolecules by providing direct information about root mean-square fluctuations (RMSF) that can also be calculated from molecular dynamics simulations. We provide a mathematical derivation showing that, given a set of conservative assumptions, a root mean-square ensemble-average of an all-against-all distribution of pairwise RMSD for a single molecular species,
Determination of Ensemble-Average Pairwise Root Mean-Square Deviation from Experimental B-Factors
Kuzmanic, Antonija; Zagrovic, Bojan
2010-01-01
Abstract Root mean-square deviation (RMSD) after roto-translational least-squares fitting is a measure of global structural similarity of macromolecules used commonly. On the other hand, experimental x-ray B-factors are used frequently to study local structural heterogeneity and dynamics in macromolecules by providing direct information about root mean-square fluctuations (RMSF) that can also be calculated from molecular dynamics simulations. We provide a mathematical derivation showing that, given a set of conservative assumptions, a root mean-square ensemble-average of an all-against-all distribution of pairwise RMSD for a single molecular species,
Lo, Wai Ting; Yick, Kit Lun; Ng, Sun Pui; Yip, Joanne
2014-01-01
Orthotic insoles are commonly used in the treatment of the diabetic foot to prevent ulcerations. Choosing suitable insole material is vital for effective foot orthotic treatment. We examined seven types of orthotic materials. In consideration of the key requirements and end uses of orthotic insoles for the diabetic foot, including accommodation, cushioning, and control, we developed test methods for examining important physical properties, such as force reduction and compression properties, insole-skin friction, and shear properties, as well as thermal comfort properties of fabrication materials. A novel performance index that combines various material test results together was also proposed to quantify the overall performance of the insole materials. The investigation confirms that the insole-sock interface has a lower coefficient of friction and shearing stress than those of the insole-skin interface. It is also revealed that material brand and the corresponding density and cell volume, as well as thickness, are closely associated with the performance of moisture absorption and thermal comfort. On the basis of the proposed performance index, practitioners can better understand the properties and performance of various insole materials, thus prescribing suitable orthotic insoles for patients with diabetic foot.
Plantar pressure with and without custom insoles in patients with common foot complaints.
Stolwijk, Niki M; Louwerens, Jan Willem K; Nienhuis, Bart; Duysens, Jacques; Keijsers, Noël L W
2011-01-01
Although many patients with foot complaints receive customized insoles, the choice for an insole design can vary largely among foot experts. To investigate the variety of insole designs used in daily practice, the insole design and its effect on plantar pressure distribution were investigated in a large group of patients. Mean, peak, and pressure-time-integral per sensor for 204 subjects with common foot complaints for walking with and without insoles was measured with the footscan® insole system (RSscan International). Each insole was scanned twice (precision3D), after which the insole height along the longitudinal and transversal cross section was calculated. Subjects were assigned to subgroups based on complaint and medial arch height. Data were analyzed for the total group and for the separate subgroups (forefoot or heel pain group and flat, normal or high medial arch group). The mean pressure significantly decreased under the metatarsal heads II-V and the calcaneus and significantly increased under the metatarsal bones and the lateral foot (p<0.0045) due to the insoles. However, similar redistribution patterns were found for the different foot complaints and arch heights. There was a slight difference in insole design between the subgroups; the heel cup was significantly higher and the midfoot support lower for the heel pain group compared to the forefoot pain group. The midfoot support was lowest in the flat arch group compared to the high and normal arch group (p<0.05). Although the insole shape was specific for the kind of foot complaint and arch height, the differences in shape were very small and the plantar pressure redistribution was similar for all groups. This study indicates that it might be sufficient to create basic insoles for particular patient groups.
Nonlinear Insolation Forcing: A Physical Mechanism for Climate Change
NASA Technical Reports Server (NTRS)
Liu, H. S.
1998-01-01
This paper focuses on recent advances in the understanding of nonlinear insolation forcing for climate change. The amplitude-frequency resonances in the insolation variations induced by the Earth's changing obliquity are emergent and may provide a physical mechanism to drive the glaciation cycles. To establish the criterion that nonlinear insolation forcing is responsible for major climate changes, the cooperative phenomena between the frequency and amplitude of the insolation are defined as insolation pulsation. Coupling of the insolation frequency and amplitude variations has established an especially new and interesting series of insolation pulses. These pulses would modulate the insolation in such a way that the mode of insolation variations could be locked to generate the 100-kyr ice age cycle which is a long-time geophysical puzzle. The nonlinear behavior of insolation forcing is tested by energy balance and ice sheet climate models and the physical mechanism behind this forcing is explained in terms of pulse duration in the incoming solar radiation. Calculations of the solar energy flux at the top of the atmosphere show that the duration of the negative and positive insolation pulses is about 2 thousand years which is long enough to prolong glaciation into deep ice ages and cause rapid melting of large ice sheets in the high latitudes of the northern hemisphere. We have performed numerical simulations of climate response to nonlinear insolation forcing for the past 2 million years. Our calculated results of temperature fluctuations are in good agreement with the climate cycles as seen in the terrestrial biogenic silica (BDP-96-2) data as well as in the marine oxygen isotope (delta(sup 18)O) records.
Variety and volatility in financial markets
NASA Astrophysics Data System (ADS)
Lillo, Fabrizio; Mantegna, Rosario N.
2000-11-01
We study the price dynamics of stocks traded in a financial market by considering the statistical properties of both a single time series and an ensemble of stocks traded simultaneously. We use the n stocks traded on the New York Stock Exchange to form a statistical ensemble of daily stock returns. For each trading day of our database, we study the ensemble return distribution. We find that a typical ensemble return distribution exists in most of the trading days with the exception of crash and rally days and of the days following these extreme events. We analyze each ensemble return distribution by extracting its first two central moments. We observe that these moments fluctuate in time and are stochastic processes, themselves. We characterize the statistical properties of ensemble return distribution central moments by investigating their probability density functions and temporal correlation properties. In general, time-averaged and portfolio-averaged price returns have different statistical properties. We infer from these differences information about the relative strength of correlation between stocks and between different trading days. Last, we compare our empirical results with those predicted by the single-index model and we conclude that this simple model cannot explain the statistical properties of the second moment of the ensemble return distribution.
NASA Astrophysics Data System (ADS)
Fox, Neil I.; Micheas, Athanasios C.; Peng, Yuqiang
2016-07-01
This paper introduces the use of Bayesian full Procrustes shape analysis in object-oriented meteorological applications. In particular, the Procrustes methodology is used to generate mean forecast precipitation fields from a set of ensemble forecasts. This approach has advantages over other ensemble averaging techniques in that it can produce a forecast that retains the morphological features of the precipitation structures and present the range of forecast outcomes represented by the ensemble. The production of the ensemble mean avoids the problems of smoothing that result from simple pixel or cell averaging, while producing credible sets that retain information on ensemble spread. Also in this paper, the full Bayesian Procrustes scheme is used as an object verification tool for precipitation forecasts. This is an extension of a previously presented Procrustes shape analysis based verification approach into a full Bayesian format designed to handle the verification of precipitation forecasts that match objects from an ensemble of forecast fields to a single truth image. The methodology is tested on radar reflectivity nowcasts produced in the Warning Decision Support System - Integrated Information (WDSS-II) by varying parameters in the K-means cluster tracking scheme.
Weak ergodicity breaking, irreproducibility, and ageing in anomalous diffusion processes
DOE Office of Scientific and Technical Information (OSTI.GOV)
Metzler, Ralf
2014-01-14
Single particle traces are standardly evaluated in terms of time averages of the second moment of the position time series r(t). For ergodic processes, one can interpret such results in terms of the known theories for the corresponding ensemble averaged quantities. In anomalous diffusion processes, that are widely observed in nature over many orders of magnitude, the equivalence between (long) time and ensemble averages may be broken (weak ergodicity breaking), and these time averages may no longer be interpreted in terms of ensemble theories. Here we detail some recent results on weakly non-ergodic systems with respect to the time averagedmore » mean squared displacement, the inherent irreproducibility of individual measurements, and methods to determine the exact underlying stochastic process. We also address the phenomenon of ageing, the dependence of physical observables on the time span between initial preparation of the system and the start of the measurement.« less
NASA Astrophysics Data System (ADS)
Kobayashi, Kenichiro; Otsuka, Shigenori; Apip; Saito, Kazuo
2016-08-01
This paper presents a study on short-term ensemble flood forecasting specifically for small dam catchments in Japan. Numerical ensemble simulations of rainfall from the Japan Meteorological Agency nonhydrostatic model (JMA-NHM) are used as the input data to a rainfall-runoff model for predicting river discharge into a dam. The ensemble weather simulations use a conventional 10 km and a high-resolution 2 km spatial resolutions. A distributed rainfall-runoff model is constructed for the Kasahori dam catchment (approx. 70 km2) and applied with the ensemble rainfalls. The results show that the hourly maximum and cumulative catchment-average rainfalls of the 2 km resolution JMA-NHM ensemble simulation are more appropriate than the 10 km resolution rainfalls. All the simulated inflows based on the 2 and 10 km rainfalls become larger than the flood discharge of 140 m3 s-1, a threshold value for flood control. The inflows with the 10 km resolution ensemble rainfall are all considerably smaller than the observations, while at least one simulated discharge out of 11 ensemble members with the 2 km resolution rainfalls reproduces the first peak of the inflow at the Kasahori dam with similar amplitude to observations, although there are spatiotemporal lags between simulation and observation. To take positional lags into account of the ensemble discharge simulation, the rainfall distribution in each ensemble member is shifted so that the catchment-averaged cumulative rainfall of the Kasahori dam maximizes. The runoff simulation with the position-shifted rainfalls shows much better results than the original ensemble discharge simulations.
The effect of insoles on foot pain and daily activities.
Amer, Ahmed O; Jarl, Gustav M; Hermansson, Liselotte N
2014-12-01
Foot pain decreases individuals' ability to perform daily activities. Insoles are often prescribed to reduce the pain which, in turn, may promote return to normal activities. To evaluate the effects of insoles on foot pain and daily activities, and to investigate the relationship between individuals' satisfaction with insoles and actual use of them. A 4-week pre-post intervention follow-up. Brief Pain Inventory, International Physical Activity Questionnaire and Lower Extremities Functional Status were used as outcome measures. Client Satisfaction with Device was used in the follow-up. A total of 67 participants answered the questionnaires (81% women). Overall, a reduction in Pain Severity (p = 0.002) and Pain Interference (p = 0.008) was shown. Secondary analyses revealed a significant effect only in women. No changes in daily activities (Walking, p = 0.867; Total Physical Activity, p = 0.842; Lower Extremities Functional Status, p = 0.939) could be seen. There was no relation between Client Satisfaction with Device measures and duration of insole use. A difference in sex was shown; women scored higher than men on Pain Severity. Insoles reduce pain and pain interference with daily activities for women with foot pain. Satisfaction with the insoles is not a predictor of actual insole use. The effect of insoles on activity performance needs further study. This study provides evidence for prescribing insoles to people with foot pain. Nonetheless, insoles are not enough to increase their physical activity level in the short term. Satisfaction with insoles and duration of use are not correlated and cannot be inferred from each other. © The International Society for Prosthetics and Orthotics 2013.
Tran, Hoang T.; Pappu, Rohit V.
2006-01-01
Our focus is on an appropriate theoretical framework for describing highly denatured proteins. In high concentrations of denaturants, proteins behave like polymers in a good solvent and ensembles for denatured proteins can be modeled by ignoring all interactions except excluded volume (EV) effects. To assay conformational preferences of highly denatured proteins, we quantify a variety of properties for EV-limit ensembles of 23 two-state proteins. We find that modeled denatured proteins can be best described as follows. Average shapes are consistent with prolate ellipsoids. Ensembles are characterized by large correlated fluctuations. Sequence-specific conformational preferences are restricted to local length scales that span five to nine residues. Beyond local length scales, chain properties follow well-defined power laws that are expected for generic polymers in the EV limit. The average available volume is filled inefficiently, and cavities of all sizes are found within the interiors of denatured proteins. All properties characterized from simulated ensembles match predictions from rigorous field theories. We use our results to resolve between conflicting proposals for structure in ensembles for highly denatured states. PMID:16766618
Enhanced Sampling in the Well-Tempered Ensemble
NASA Astrophysics Data System (ADS)
Bonomi, M.; Parrinello, M.
2010-05-01
We introduce the well-tempered ensemble (WTE) which is the biased ensemble sampled by well-tempered metadynamics when the energy is used as collective variable. WTE can be designed so as to have approximately the same average energy as the canonical ensemble but much larger fluctuations. These two properties lead to an extremely fast exploration of phase space. An even greater efficiency is obtained when WTE is combined with parallel tempering. Unbiased Boltzmann averages are computed on the fly by a recently developed reweighting method [M. Bonomi , J. Comput. Chem. 30, 1615 (2009)JCCHDD0192-865110.1002/jcc.21305]. We apply WTE and its parallel tempering variant to the 2d Ising model and to a Gō model of HIV protease, demonstrating in these two representative cases that convergence is accelerated by orders of magnitude.
Enhanced sampling in the well-tempered ensemble.
Bonomi, M; Parrinello, M
2010-05-14
We introduce the well-tempered ensemble (WTE) which is the biased ensemble sampled by well-tempered metadynamics when the energy is used as collective variable. WTE can be designed so as to have approximately the same average energy as the canonical ensemble but much larger fluctuations. These two properties lead to an extremely fast exploration of phase space. An even greater efficiency is obtained when WTE is combined with parallel tempering. Unbiased Boltzmann averages are computed on the fly by a recently developed reweighting method [M. Bonomi, J. Comput. Chem. 30, 1615 (2009)]. We apply WTE and its parallel tempering variant to the 2d Ising model and to a Gō model of HIV protease, demonstrating in these two representative cases that convergence is accelerated by orders of magnitude.
Inhomogeneous diffusion and ergodicity breaking induced by global memory effects
NASA Astrophysics Data System (ADS)
Budini, Adrián A.
2016-11-01
We introduce a class of discrete random-walk model driven by global memory effects. At any time, the right-left transitions depend on the whole previous history of the walker, being defined by an urnlike memory mechanism. The characteristic function is calculated in an exact way, which allows us to demonstrate that the ensemble of realizations is ballistic. Asymptotically, each realization is equivalent to that of a biased Markovian diffusion process with transition rates that strongly differs from one trajectory to another. Using this "inhomogeneous diffusion" feature, the ergodic properties of the dynamics are analytically studied through the time-averaged moments. Even in the long-time regime, they remain random objects. While their average over realizations recovers the corresponding ensemble averages, departure between time and ensemble averages is explicitly shown through their probability densities. For the density of the second time-averaged moment, an ergodic limit and the limit of infinite lag times do not commutate. All these effects are induced by the memory effects. A generalized Einstein fluctuation-dissipation relation is also obtained for the time-averaged moments.
Constructing optimal ensemble projections for predictive environmental modelling in Northern Eurasia
NASA Astrophysics Data System (ADS)
Anisimov, Oleg; Kokorev, Vasily
2013-04-01
Large uncertainties in climate impact modelling are associated with the forcing climate data. This study is targeted at the evaluation of the quality of GCM-based climatic projections in the specific context of predictive environmental modelling in Northern Eurasia. To accomplish this task, we used the output from 36 CMIP5 GCMs from the IPCC AR-5 data base for the control period 1975-2005 and calculated several climatic characteristics and indexes that are most often used in the impact models, i.e. the summer warmth index, duration of the vegetation growth period, precipitation sums, dryness index, thawing degree-day sums, and the annual temperature amplitude. We used data from 744 weather stations in Russia and neighbouring countries to analyze the spatial patterns of modern climatic change and to delineate 17 large regions with coherent temperature changes in the past few decades. GSM results and observational data were averaged over the coherent regions and compared with each other. Ultimately, we evaluated the skills of individual models, ranked them in the context of regional impact modelling and identified top-end GCMs that "better than average" reproduce modern regional changes of the selected meteorological parameters and climatic indexes. Selected top-end GCMs were used to compose several ensembles, each combining results from the different number of models. Ensembles were ranked using the same algorithm and outliers eliminated. We then used data from top-end ensembles for the 2000-2100 period to construct the climatic projections that are likely to be "better than average" in predicting climatic parameters that govern the state of environment in Northern Eurasia. The ultimate conclusions of our study are the following. • High-end GCMs that demonstrate excellent skills in conventional atmospheric model intercomparison experiments are not necessarily the best in replicating climatic characteristics that govern the state of environment in Northern Eurasia, and independent model evaluation on regional level is necessary to identify "better than average" GCMs. • Each of the ensembles combining results from several "better than average" models replicate selected meteorological parameters and climatic indexes better than any single GCM. The ensemble skills are parameter-specific and depend on models it consists of. The best results are not necessarily those based on the ensemble comprised by all "better than average" models. • Comprehensive evaluation of climatic scenarios using specific criteria narrows the range of uncertainties in environmental projections.
Toda, Y; Segal, N; Kato, A; Yamamoto, S; Irie, M
2001-12-01
To assess the efficacy of a lateral wedge insole with elastic strapping of the subtalar joint for conservative treatment of osteoarthritis (OA) of the knee. The efficacy of a novel insole with elastic subtalar strapping and a traditional shoe insert wedge insole was compared. Ninety female outpatients with OA of the knee were treated with wedge insoles for 8 weeks. Randomization was performed according to birth date. Standing radiographs with unilateral insole use were used to analyze the femorotibial and talar tilt angles for each patient with and without their respective insole. Visual analog scale (VAS) score for subjective knee pain at the final assessment was compared with that at baseline in both groups. Participants wearing the elastically strapped insole (n = 46) had significantly decreased femorotibial angle (p < 0.0001) and talar tilt angle (p = 0.005) and significantly improved VAS pain score (p = 0.045) in comparison with baseline assessments. These significant differences were not found in the group with the inserted insole (n = 44). The novel strapped insole leads to valgus angulation of the talus, resulting in correction of the femorotibial angle in patients with knee OA with varus deformity, and may have a therapeutic effect similar to that of high tibial osteotomy.
Hsu, Yu-Chun; Gung, Yih-Wen; Shih, Shih-Liang; Feng, Chi-Kuang; Wei, Shun-Hwa; Yu, Chung-Huang; Chen, Chen-Sheng
2008-08-01
Plantar heel pain is a commonly encountered orthopedic problem and is most often caused by plantar fasciitis. In recent years, different shapes of insole have been used to treat plantar fasciitis. However, little research has been focused on the junction stress between the plantar fascia and the calcaneus when wearing different shapes of insole. Therefore, this study aimed to employ a finite element (FE) method to investigate the relationship between different shapes of insole and the junction stress, and accordingly design an optimal insole to lower fascia stress.A detailed 3D foot FE model was created using ANSYS 9.0 software. The FE model calculation was compared to the Pedar device measurements to validate the FE model. After the FE model validation, this study conducted parametric analysis of six different insoles and used optimization analysis to determine the optimal insole which minimized the junction stress between plantar fascia and calcaneus. This FE analysis found that the plantar fascia stress and peak pressure when using the optimal insole were lower by 14% and 38.9%, respectively, than those when using the flat insole. In addition, the stress variation in plantar fascia was associated with the different shapes of insole.
Quantum canonical ensemble: A projection operator approach
NASA Astrophysics Data System (ADS)
Magnus, Wim; Lemmens, Lucien; Brosens, Fons
2017-09-01
Knowing the exact number of particles N, and taking this knowledge into account, the quantum canonical ensemble imposes a constraint on the occupation number operators. The constraint particularly hampers the systematic calculation of the partition function and any relevant thermodynamic expectation value for arbitrary but fixed N. On the other hand, fixing only the average number of particles, one may remove the above constraint and simply factorize the traces in Fock space into traces over single-particle states. As is well known, that would be the strategy of the grand-canonical ensemble which, however, comes with an additional Lagrange multiplier to impose the average number of particles. The appearance of this multiplier can be avoided by invoking a projection operator that enables a constraint-free computation of the partition function and its derived quantities in the canonical ensemble, at the price of an angular or contour integration. Introduced in the recent past to handle various issues related to particle-number projected statistics, the projection operator approach proves beneficial to a wide variety of problems in condensed matter physics for which the canonical ensemble offers a natural and appropriate environment. In this light, we present a systematic treatment of the canonical ensemble that embeds the projection operator into the formalism of second quantization while explicitly fixing N, the very number of particles rather than the average. Being applicable to both bosonic and fermionic systems in arbitrary dimensions, transparent integral representations are provided for the partition function ZN and the Helmholtz free energy FN as well as for two- and four-point correlation functions. The chemical potential is not a Lagrange multiplier regulating the average particle number but can be extracted from FN+1 -FN, as illustrated for a two-dimensional fermion gas.
YORP torque as the function of shape harmonics
NASA Astrophysics Data System (ADS)
Breiter, Sławomir; Michalska, Hanna
2008-08-01
The second-order analytical approximation of the mean Yarkovsky-O'Keefe-Radzievskii-Paddack (YORP) torque components is given as an explicit function of the shape spherical harmonics coefficients for a sufficiently regular minor body. The results are based upon a new expression for the insolation function, significantly simpler than in previous works. Linearized plane-parallel model of the temperature distribution derived from the insolation function allows us to take into account a non-zero conductivity. Final expressions for the three average components of the YORP torque related with rotation period, obliquity and precession are given in a form of the Legendre series of the cosine of obliquity. The series have good numerical properties and can be easily truncated according to the degree of the Legendre polynomials or associated functions, with first two terms playing the principal role.
Paton, Joanne S; Stenhouse, Elizabeth; Bruce, Graham; Jones, Ray
2014-01-01
Insoles are commonly used to assist in the prevention of diabetic neuropathic foot ulceration. Insole replacement is often triggered only when foot lesions deteriorate, an indicator that functional performance is comprised and patients are exposed to unnecessary ulcer risk. We investigated the durability of insoles used for ulcer prevention in neuropathic diabetic feet over 12 months. Sixty neuropathic individuals with diabetes were provided with insoles and footwear. Insole durability over 12 months was evaluated using an in-shoe pressure measurement device and through repeated measurement of material depth at the first metatarsal head and the heel seat. Analysis of variance was performed to assess change across time (at issue, 6 months, and 12 months). Analyses were conducted using all available data (n = 43) and compliant data (n = 18). No significant difference was found in the reduction of mean peak pressure tested across time (P < .05). For both sites, significant differences in insole depth were identified between issue and 6 months and between issue and 12 months but not between 6 and 12 months (P < .05). Most insole compression occurred during the initial 6 months. Visual material compression does not seem to be a reliable indicator of insole usefulness. Frequency of insole replacement is best informed by a functional review of effect determined using an in-shoe pressure measurement system. These results suggest that insoles for diabetic neuropathic patients can be effective in maintaining peak pressure reduction for 12 months regardless of wear frequency.
A virtual pebble game to ensemble average graph rigidity.
González, Luis C; Wang, Hui; Livesay, Dennis R; Jacobs, Donald J
2015-01-01
The body-bar Pebble Game (PG) algorithm is commonly used to calculate network rigidity properties in proteins and polymeric materials. To account for fluctuating interactions such as hydrogen bonds, an ensemble of constraint topologies are sampled, and average network properties are obtained by averaging PG characterizations. At a simpler level of sophistication, Maxwell constraint counting (MCC) provides a rigorous lower bound for the number of internal degrees of freedom (DOF) within a body-bar network, and it is commonly employed to test if a molecular structure is globally under-constrained or over-constrained. MCC is a mean field approximation (MFA) that ignores spatial fluctuations of distance constraints by replacing the actual molecular structure by an effective medium that has distance constraints globally distributed with perfect uniform density. The Virtual Pebble Game (VPG) algorithm is a MFA that retains spatial inhomogeneity in the density of constraints on all length scales. Network fluctuations due to distance constraints that may be present or absent based on binary random dynamic variables are suppressed by replacing all possible constraint topology realizations with the probabilities that distance constraints are present. The VPG algorithm is isomorphic to the PG algorithm, where integers for counting "pebbles" placed on vertices or edges in the PG map to real numbers representing the probability to find a pebble. In the VPG, edges are assigned pebble capacities, and pebble movements become a continuous flow of probability within the network. Comparisons between the VPG and average PG results over a test set of proteins and disordered lattices demonstrate the VPG quantitatively estimates the ensemble average PG results well. The VPG performs about 20% faster than one PG, and it provides a pragmatic alternative to averaging PG rigidity characteristics over an ensemble of constraint topologies. The utility of the VPG falls in between the most accurate but slowest method of ensemble averaging over hundreds to thousands of independent PG runs, and the fastest but least accurate MCC.
Shear-reducing insoles to prevent foot ulceration in high-risk diabetic patients.
Lavery, Lawrence A; LaFontaine, Javier; Higgins, Kevin R; Lanctot, Dan R; Constantinides, George
2012-11-01
To enhance the learner's competence with knowledge of the effectiveness of shear-reducing insoles for prevention of foot ulceration in patients with high-risk diabetes. This continuing education activity is intended for physicians and nurses with an interest in skin and wound care. After participating in this educational activity, the participant should be better able to:1. Demonstrate knowledge of foot ulceration risk, risk factors, incidence, and prevention.2. Apply knowledge gained from reviewing this study and a literature review about the use of shear-reducing insoles to patient scenarios. The objective of this study was to evaluate the effectiveness of a shear-reducing insole compared with a standard insole design to prevent foot ulceration in high-risk patients with diabetes. A total of 299 patients with diabetic neuropathy and loss of protective sensation, foot deformity, or history of foot ulceration were randomized into a standard therapy group (n = 150) or a shear-reducing insole group (n = 149). Patients were evaluated for 18 months. Standard therapy group consisted of therapeutic footwear, diabetic foot education, and regular foot evaluation by a podiatrist. The shear-reducing insole group included a novel insole designed to reduce both pressure and shear on the sole of the foot. Insoles were replaced every 4 months in both groups. The primary clinical outcome was foot ulceration. The authors used Cox proportional hazards regression to evaluate time to ulceration. There were 2 significant factors from the Cox regression model: insole treatment and history of a foot complication. The standard therapy group was about 3.5 times more likely to develop an ulcer compared with shear-reducing insole group (hazard ratio, 3.47; 95% confidence interval, 0.96-12.67). These results suggest that a shear-reducing insole is more effective than traditional insoles to prevent foot ulcers in high-risk persons with diabetes.
Toda, Y; Tsukimura, N
2006-03-01
This study was conducted in order to assess the effect of wearing a lateral wedged insole with a subtalar strap for 2 years in patients with osteoarthritis varus deformity of the knee (knee OA). The setting was an outpatient clinic. The efficacies of the strapped insole and a traditional shoe insert wedged insole (the inserted insole), as a positive control, were compared at the baseline and after 2 years of treatment. Randomization was performed according to birth date. The 61 female outpatients with knee OA who completed a prior 6-month study were asked to wear their respective insoles continuously as treatment during the course of the 2-year study. The femorotibial angle (FTA) was assessed by standing radiographs obtained while the subjects were barefoot and the Lequesne index of the knee OA at 2 years was compared with those at baseline in each insole group. There were 61 patients in the original study, but 13 patients (21.3%) did not want to wear the insole continuously and five (8.2%) withdrew for other reasons. The 42 patients who completed the 2-year study were evaluated. At the 2-year assessment, participants wearing the subtalar strapped insole (n=21) demonstrated significantly decreased FTA (P=0.015), and significantly improved Lequesne index (P=0.031) in comparison with their baseline assessments. These significant differences were not found in the group with the traditional shoe inserted wedged insole (n=21). Only those participants using the subtalar strapped insole demonstrated significant change in the FTA in comparison with the baseline assessments. If the insole with a subtalar strap maintains FTA for more than 2 years, it may restrict the progression of degenerative articular cartilage lesions of knee OA.
Creation of the BMA ensemble for SST using a parallel processing technique
NASA Astrophysics Data System (ADS)
Kim, Kwangjin; Lee, Yang Won
2013-10-01
Despite the same purpose, each satellite product has different value because of its inescapable uncertainty. Also the satellite products have been calculated for a long time, and the kinds of the products are various and enormous. So the efforts for reducing the uncertainty and dealing with enormous data will be necessary. In this paper, we create an ensemble Sea Surface Temperature (SST) using MODIS Aqua, MODIS Terra and COMS (Communication Ocean and Meteorological Satellite). We used Bayesian Model Averaging (BMA) as ensemble method. The principle of the BMA is synthesizing the conditional probability density function (PDF) using posterior probability as weight. The posterior probability is estimated using EM algorithm. The BMA PDF is obtained by weighted average. As the result, the ensemble SST showed the lowest RMSE and MAE, which proves the applicability of BMA for satellite data ensemble. As future work, parallel processing techniques using Hadoop framework will be adopted for more efficient computation of very big satellite data.
Impact of soft and hard insole density on postural stability in older adults.
Losa Iglesias, Marta Elena; Becerro de Bengoa Vallejo, Ricardo; Palacios Peña, Domingo
2012-01-01
A significant predictor of falls in the elderly population is attributed to postural instability. Thus, it is important to identify and implement practical clinical interventions to enhance postural stability in older adults. Shoe insoles have been identified as a mechanism to enhance postural control, and our study aimed to evaluate the impact of 2 shoe insoles on static standing balance in healthy, older adults compared with standing posture while barefoot. We hypothesized that both hard and soft shoe insoles would decrease postural sway compared with the barefoot condition. Indeed, excursion distances and sway areas were reduced, and sway velocity was decreased when wearing insoles. The hard insole was also effective when visual feedback was removed, suggesting that the more rigid an insole, the greater potential reduction in fall risk. Thus, shoe insoles may be a cost-effective, clinical intervention that is easy to implement to reduce the risk of falling in the elderly population. Copyright © 2012 Mosby, Inc. All rights reserved.
Su, Shonglun; Mo, Zhongjun; Guo, Junchao; Fan, Yubo
2017-01-01
Flat foot is one of the common deformities in the youth population, seriously affecting the weight supporting and daily exercising. However, there is lacking of quantitative data relative to material selection and shape design of the personalized orthopedic insole. This study was to evaluate the biomechanical effects of material hardness and support height of personalized orthopedic insole on foot tissues, by in vivo experiment and finite element modeling. The correction of arch height increased with material hardness and support height. The peak plantar pressure increased with the material hardness, and these values by wearing insoles of 40° were apparently higher than the bare feet condition. Harder insole material results in higher stress in the joint and ligament stress than softer material. In the calcaneocuboid joint, the stress increased with the arch height of insoles. The material hardness did not apparently affect the stress in the ankle joints, but the support heights of insole did. In general, insole material and support design are positively affecting the correction of orthopedic insole, but negatively resulting in unreasonable stress on the stress in the joint and ligaments. There should be an integration of improving correction and reducing stress in foot tissues.
NASA Astrophysics Data System (ADS)
Colorado, G.; Salinas, J. A.; Cavazos, T.; de Grau, P.
2013-05-01
15 CMIP5 GCMs precipitation simulations were combined in a weighted ensemble using the Reliable Ensemble Averaging (REA) method, obtaining the weight of each model. This was done for a historical period (1961-2000) and for the future emissions based on low (RCP4.5) and high (RCP8.5) radiating forcing for the period 2075-2099. The annual cycle of simple ensemble of the historical GCMs simulations, the historical REA average and the Climate Research Unit (CRU TS3.1) database was compared in four zones of México. In the case of precipitation we can see the improvements by using the REA method, especially in the two northern zones of México where the REA average is more close to the observations (CRU) that the simple average. However in the southern zones although there is an improvement it is not as good as it is in the north, particularly in the southeast where instead of the REA average is able to reproduce qualitatively good the annual cycle with the mid-summer drought it was greatly underestimated. The main reason is because the precipitation is underestimated for all the models and the mid-summer drought do not even exists in some models. In the REA average of the future scenarios, as we can expected, the most drastic decrease in precipitation was simulated using the RCP8.5 especially in the monsoon area and in the south of Mexico in summer and in winter. In the center and southern of Mexico however, the same scenario in autumn simulates an increase of precipitation.
[Use of insoles made of antimicrobial materials as prophylactic means in foot mycoses].
Sedov, A V; Vazhbin, L B; Odtarzhevskaia, N D; Astaf'eva, I P; Poliakova, L A; Karpov, V V; Ashurova, E I; Lazareva, N M; Mikhaĭlov, O R
1994-01-01
Stationary dermatologic examination covered 32 sufferers from epidermophytosis of soles, who used 3 types of antimicrobial insoles chosen through laboratory investigations. Clinical trials proved that antimicrobial insoles, if applied during 2 weeks, result in considerably decreased occurrence of causal fungus in the patients' surface skin scarring. The results proved fungicidal and bactericidal activity of insoles including furagin, nitrofurilacroleine, polyhexamethylene guanidine, so such insoles could be recommended as prophylactic measure for mycoses of soles.
21 CFR 880.6280 - Medical insole.
Code of Federal Regulations, 2012 CFR
2012-04-01
... 21 Food and Drugs 8 2012-04-01 2012-04-01 false Medical insole. 880.6280 Section 880.6280 Food and Drugs FOOD AND DRUG ADMINISTRATION, DEPARTMENT OF HEALTH AND HUMAN SERVICES (CONTINUED) MEDICAL DEVICES....6280 Medical insole. (a) Identification. A medical insole is a device intended for medical purposes...
21 CFR 880.6280 - Medical insole.
Code of Federal Regulations, 2014 CFR
2014-04-01
... 21 Food and Drugs 8 2014-04-01 2014-04-01 false Medical insole. 880.6280 Section 880.6280 Food and Drugs FOOD AND DRUG ADMINISTRATION, DEPARTMENT OF HEALTH AND HUMAN SERVICES (CONTINUED) MEDICAL DEVICES....6280 Medical insole. (a) Identification. A medical insole is a device intended for medical purposes...
21 CFR 880.6280 - Medical insole.
Code of Federal Regulations, 2013 CFR
2013-04-01
... 21 Food and Drugs 8 2013-04-01 2013-04-01 false Medical insole. 880.6280 Section 880.6280 Food and Drugs FOOD AND DRUG ADMINISTRATION, DEPARTMENT OF HEALTH AND HUMAN SERVICES (CONTINUED) MEDICAL DEVICES....6280 Medical insole. (a) Identification. A medical insole is a device intended for medical purposes...
21 CFR 880.6280 - Medical insole.
Code of Federal Regulations, 2010 CFR
2010-04-01
... 21 Food and Drugs 8 2010-04-01 2010-04-01 false Medical insole. 880.6280 Section 880.6280 Food and Drugs FOOD AND DRUG ADMINISTRATION, DEPARTMENT OF HEALTH AND HUMAN SERVICES (CONTINUED) MEDICAL DEVICES....6280 Medical insole. (a) Identification. A medical insole is a device intended for medical purposes...
21 CFR 880.6280 - Medical insole.
Code of Federal Regulations, 2011 CFR
2011-04-01
... 21 Food and Drugs 8 2011-04-01 2011-04-01 false Medical insole. 880.6280 Section 880.6280 Food and Drugs FOOD AND DRUG ADMINISTRATION, DEPARTMENT OF HEALTH AND HUMAN SERVICES (CONTINUED) MEDICAL DEVICES....6280 Medical insole. (a) Identification. A medical insole is a device intended for medical purposes...
NASA Astrophysics Data System (ADS)
Drótos, Gábor; Bódai, Tamás; Tél, Tamás
2016-08-01
In nonautonomous dynamical systems, like in climate dynamics, an ensemble of trajectories initiated in the remote past defines a unique probability distribution, the natural measure of a snapshot attractor, for any instant of time, but this distribution typically changes in time. In cases with an aperiodic driving, temporal averages taken along a single trajectory would differ from the corresponding ensemble averages even in the infinite-time limit: ergodicity does not hold. It is worth considering this difference, which we call the nonergodic mismatch, by taking time windows of finite length for temporal averaging. We point out that the probability distribution of the nonergodic mismatch is qualitatively different in ergodic and nonergodic cases: its average is zero and typically nonzero, respectively. A main conclusion is that the difference of the average from zero, which we call the bias, is a useful measure of nonergodicity, for any window length. In contrast, the standard deviation of the nonergodic mismatch, which characterizes the spread between different realizations, exhibits a power-law decrease with increasing window length in both ergodic and nonergodic cases, and this implies that temporal and ensemble averages differ in dynamical systems with finite window lengths. It is the average modulus of the nonergodic mismatch, which we call the ergodicity deficit, that represents the expected deviation from fulfilling the equality of temporal and ensemble averages. As an important finding, we demonstrate that the ergodicity deficit cannot be reduced arbitrarily in nonergodic systems. We illustrate via a conceptual climate model that the nonergodic framework may be useful in Earth system dynamics, within which we propose the measure of nonergodicity, i.e., the bias, as an order-parameter-like quantifier of climate change.
Ensemble representations: effects of set size and item heterogeneity on average size perception.
Marchant, Alexander P; Simons, Daniel J; de Fockert, Jan W
2013-02-01
Observers can accurately perceive and evaluate the statistical properties of a set of objects, forming what is now known as an ensemble representation. The accuracy and speed with which people can judge the mean size of a set of objects have led to the proposal that ensemble representations of average size can be computed in parallel when attention is distributed across the display. Consistent with this idea, judgments of mean size show little or no decrement in accuracy when the number of objects in the set increases. However, the lack of a set size effect might result from the regularity of the item sizes used in previous studies. Here, we replicate these previous findings, but show that judgments of mean set size become less accurate when set size increases and the heterogeneity of the item sizes increases. This pattern can be explained by assuming that average size judgments are computed using a limited capacity sampling strategy, and it does not necessitate an ensemble representation computed in parallel across all items in a display. Copyright © 2012 Elsevier B.V. All rights reserved.
One size fits all electronics for insole-based activity monitoring.
Hegde, Nagaraj; Bries, Matthew; Melanson, Edward; Sazonov, Edward
2017-07-01
Footwear based wearable sensors are becoming prominent in many areas of monitoring health and wellness, such as gait and activity monitoring. In our previous research we introduced an insole based wearable system SmartStep, which is completely integrated in a socially acceptable package. From a manufacturing perspective, SmartStep's electronics had to be custom made for each shoe size, greatly complicating the manufacturing process. In this work we explore the possibility of making a universal electronics platform for SmartStep - SmartStep 3.0, which can be used in the most common insole sizes without modifications. A pilot human subject experiments were run to compare the accuracy between the one-size fits all (SmartStep 3.0) and custom size SmartStep 2.0. A total of ~10 hours of data was collected in the pilot study involving three participants performing different activities of daily living while wearing SmartStep 2.0 and SmartStep 3.0. Leave one out cross validation resulted in a 98.5% average accuracy from SmartStep 2.0, while SmartStep 3.0 resulted in 98.3% accuracy, suggesting that the SmartStep 3.0 can be as accurate as SmartStep 2.0, while fitting most common shoe sizes.
NASA Astrophysics Data System (ADS)
Volobuev, D. M.; Makarenko, N. G.
2014-12-01
Because of the small amplitude of insolation variations (1365.2-1366.6 W m-2 or 0.1%) from the 11-year solar cycle minimum to the cycle maximum and the structural complexity of the climatic dynamics, it is difficult to directly observe a solar signal in the surface temperature. The main difficulty is reduced to two factors: (1) a delay in the temperature response to external action due to thermal inertia, and (2) powerful internal fluctuations of the climatic dynamics suppressing the solar-driven component. In this work we take into account the first factor, solving the inverse problem of thermal conductivity in order to calculate the vertical heat flux from the measured temperature near the Earth's surface. The main model parameter—apparent thermal inertia—is calculated from the local seasonal extremums of temperature and albedo. We level the second factor by averaging mean annual heat fluxes in a latitudinal belt. The obtained mean heat fluxes significantly correlate with a difference between the insolation and optical depth of volcanic aerosol in the atmosphere, converted into a hindered heat flux. The calculated correlation smoothly increases with increasing latitude to 0.4-0.6, and the revealed latitudinal dependence is explained by the known effect of polar amplification.
Characteristics of ion flow in the quiet state of the inner plasma sheet
NASA Technical Reports Server (NTRS)
Angelopoulos, V.; Kennel, C. F.; Coroniti, F. V.; Pellat, R.; Spence, H. E.; Kivelson, M. G.; Walker, R. J.; Baumjohann, W.; Feldman, W. C.; Gosling, J. T.
1993-01-01
We use AMPTE/IRM and ISEE 2 data to study the properties of the high beta plasma sheet, the inner plasma sheet (IPS). Bursty bulk flows (BBFs) are excised from the two databases, and the average flow pattern in the non-BBF (quiet) IPS is constructed. At local midnight this ensemble-average flow is predominantly duskward; closer to the flanks it is mostly earthward. The flow pattern agrees qualitatively with calculations based on the Tsyganenko (1987) model (T87), where the earthward flow is due to the ensemble-average cross tail electric field and the duskward flow is the diamagnetic drift due to an inward pressure gradient. The IPS is on the average in pressure equilibrium with the lobes. Because of its large variance the average flow does not represent the instantaneous flow field. Case studies also show that the non-BBF flow is highly irregular and inherently unsteady, a reason why earthward convection can avoid a pressure balance inconsistency with the lobes. The ensemble distribution of velocities is a fundamental observable of the quiet plasma sheet flow field.
Application of Generalized Feynman-Hellmann Theorem in Quantization of LC Circuit in Thermo Bath
NASA Astrophysics Data System (ADS)
Fan, Hong-Yi; Tang, Xu-Bing
For the quantized LC electric circuit, when taking the Joule thermal effect into account, we think that physical observables should be evaluated in the context of ensemble average. We then use the generalized Feynman-Hellmann theorem for ensemble average to calculate them, which seems convenient. Fluctuation of observables in various LC electric circuits in the presence of thermo bath growing with temperature is exhibited.
Calculating ensemble averaged descriptions of protein rigidity without sampling.
González, Luis C; Wang, Hui; Livesay, Dennis R; Jacobs, Donald J
2012-01-01
Previous works have demonstrated that protein rigidity is related to thermodynamic stability, especially under conditions that favor formation of native structure. Mechanical network rigidity properties of a single conformation are efficiently calculated using the integer body-bar Pebble Game (PG) algorithm. However, thermodynamic properties require averaging over many samples from the ensemble of accessible conformations to accurately account for fluctuations in network topology. We have developed a mean field Virtual Pebble Game (VPG) that represents the ensemble of networks by a single effective network. That is, all possible number of distance constraints (or bars) that can form between a pair of rigid bodies is replaced by the average number. The resulting effective network is viewed as having weighted edges, where the weight of an edge quantifies its capacity to absorb degrees of freedom. The VPG is interpreted as a flow problem on this effective network, which eliminates the need to sample. Across a nonredundant dataset of 272 protein structures, we apply the VPG to proteins for the first time. Our results show numerically and visually that the rigidity characterizations of the VPG accurately reflect the ensemble averaged [Formula: see text] properties. This result positions the VPG as an efficient alternative to understand the mechanical role that chemical interactions play in maintaining protein stability.
Insolation at Carterville, Illinois
Peter Y. S. Chen
1981-01-01
Insolation measured with a precision spectral pyranometer, was recorded near Carterville, Illinois, for 1 year. the pyranometer was tilted at an angle of 25 degrees in summer, 50 degrees in winter, and 37.5 degrees in spring and fall. the insolation measured in winter was found to be significantly larger than the insolation estimated on a horizontal surface.
Su, Shonglun; Mo, Zhongjun; Guo, Junchao
2017-01-01
Flat foot is one of the common deformities in the youth population, seriously affecting the weight supporting and daily exercising. However, there is lacking of quantitative data relative to material selection and shape design of the personalized orthopedic insole. This study was to evaluate the biomechanical effects of material hardness and support height of personalized orthopedic insole on foot tissues, by in vivo experiment and finite element modeling. The correction of arch height increased with material hardness and support height. The peak plantar pressure increased with the material hardness, and these values by wearing insoles of 40° were apparently higher than the bare feet condition. Harder insole material results in higher stress in the joint and ligament stress than softer material. In the calcaneocuboid joint, the stress increased with the arch height of insoles. The material hardness did not apparently affect the stress in the ankle joints, but the support heights of insole did. In general, insole material and support design are positively affecting the correction of orthopedic insole, but negatively resulting in unreasonable stress on the stress in the joint and ligaments. There should be an integration of improving correction and reducing stress in foot tissues. PMID:29065655
Effect of Foot Progression Angle and Lateral Wedge Insole on a Reduction in Knee Adduction Moment.
Tokunaga, Ken; Nakai, Yuki; Matsumoto, Ryo; Kiyama, Ryoji; Kawada, Masayuki; Ohwatashi, Akihiko; Fukudome, Kiyohiro; Ohshige, Tadasu; Maeda, Tetsuo
2016-10-01
This study evaluated the effect of foot progression angle on the reduction in knee adduction moment caused by a lateral wedged insole during walking. Twenty healthy, young volunteers walked 10 m at their comfortable velocity wearing a lateral wedged insole or control flat insole in 3 foot progression angle conditions: natural, toe-out, and toe-in. A 3-dimensional rigid link model was used to calculate the external knee adduction moment, the moment arm of ground reaction force to knee joint center, and the reduction ratio of knee adduction moment and moment arm. The result indicated that the toe-out condition and lateral wedged insole decreased the knee adduction moment in the whole stance phase. The reduction ratio of the knee adduction moment and the moment arm exhibited a close relationship. Lateral wedged insoles decreased the knee adduction moment in various foot progression angle conditions due to decrease of the moment arm of the ground reaction force. Moreover, the knee adduction moment during the toe-out gait with lateral wedged insole was the smallest due to the synergistic effect of the lateral wedged insole and foot progression angle. Lateral wedged insoles may be a valid intervention for patients with knee osteoarthritis regardless of the foot progression angle.
Shaw, Kathryn E; Charlton, Jesse M; Perry, Christina K L; de Vries, Courtney M; Redekopp, Matthew J; White, Jordan A; Hunt, Michael A
2018-02-01
The effect of shoe-worn insoles on biomechanical variables in people with medial knee osteoarthritis has been studied extensively. The majority of research has focused specifically on the effect of lateral wedge insoles at the knee. The aim of this systematic review and meta-analysis was to summarise the known effects of different shoe-worn insoles on all biomechanical variables during level walking in this patient population to date. Four electronic databases were searched to identify studies containing biomechanical data using shoe-worn insole devices in the knee osteoarthritis population. Methodological quality was assessed and a random effects meta-analysis was performed on biomechanical variables reported in three or more studies for each insole. Twenty-seven studies of moderate-to-high methodological quality were included in this review. The primary findings were consistent reductions in the knee adduction moment with lateral wedge insoles, although increases in ankle eversion with these insoles were also found. Lateral wedge insoles produce small reductions in knee adduction angles and external moments, and moderate increases in ankle eversion. The addition of an arch support to a lateral wedge minimises ankle eversion change, and also minimises adduction moment reductions. The paucity of available data on other insole types and other biomechanical outcomes presents an opportunity for future research. © Article author(s) (or their employer(s) unless otherwise stated in the text of the article) 2018. All rights reserved. No commercial use is permitted unless otherwise expressly granted.
2012-01-01
Background Neuropathic diabetic foot ulceration may be prevented if the mechanical stress transmitted to the plantar tissues is reduced. Insole therapy is one practical method commonly used to reduce plantar loads and ulceration risk. The type of insole best suited to achieve this is unknown. This trial compared custom-made functional insoles with prefabricated insoles to reduce risk factors for ulceration of neuropathic diabetic feet. Method A participant-blinded randomised controlled trial recruited 119 neuropathic participants with diabetes who were randomly allocated to custom-made functional or prefabricated insoles. Data were collected at issue and six month follow-up using the F-scan in-shoe pressure measurement system. Primary outcomes were: peak pressure, forefoot pressure time integral, total contact area, forefoot rate of load, duration of load as a percentage of stance. Secondary outcomes were patient perceived foot health (Bristol Foot Score), quality of life (Audit of Diabetes Dependent Quality of Life). We also assessed cost of supply and fitting. Analysis was by intention-to-treat. Results There were no differences between insoles in peak pressure, or three of the other four kinetic measures. The custom-made functional insole was slightly more effective than the prefabricated insole in reducing forefoot pressure time integral at issue (27% vs. 22%), remained more effective at six month follow-up (30% vs. 24%, p=0.001), but was more expensive (UK £656 vs. £554, p<0.001). Full compliance (minimum wear 7 hours a day 7 days per week) was reported by 40% of participants and 76% of participants reported a minimum wear of 5 hours a day 5 days per week. There was no difference in patient perception between insoles. Conclusion The custom-made insoles are more expensive than prefabricated insoles evaluated in this trial and no better in reducing peak pressure. We recommend that where clinically appropriate, the more cost effective prefabricated insole should be considered for use by patients with diabetes and neuropathy. Trial registration Clinical trials.gov (NCT00999635). Note: this trial was registered on completion. PMID:23216959
Hu, Xinyao; Zhao, Jun; Peng, Dongsheng; Sun, Zhenglong; Qu, Xingda
2018-02-01
Postural control is a complex skill based on the interaction of dynamic sensorimotor processes, and can be challenging for people with deficits in sensory functions. The foot plantar center of pressure (COP) has often been used for quantitative assessment of postural control. Previously, the foot plantar COP was mainly measured by force plates or complicated and expensive insole-based measurement systems. Although some low-cost instrumented insoles have been developed, their ability to accurately estimate the foot plantar COP trajectory was not robust. In this study, a novel individual-specific nonlinear model was proposed to estimate the foot plantar COP trajectories with an instrumented insole based on low-cost force sensitive resistors (FSRs). The model coefficients were determined by a least square error approximation algorithm. Model validation was carried out by comparing the estimated COP data with the reference data in a variety of postural control assessment tasks. We also compared our data with the COP trajectories estimated by the previously well accepted weighted mean approach. Comparing with the reference measurements, the average root mean square errors of the COP trajectories of both feet were 2.23 mm (±0.64) (left foot) and 2.72 mm (±0.83) (right foot) along the medial-lateral direction, and 9.17 mm (±1.98) (left foot) and 11.19 mm (±2.98) (right foot) along the anterior-posterior direction. The results are superior to those reported in previous relevant studies, and demonstrate that our proposed approach can be used for accurate foot plantar COP trajectory estimation. This study could provide an inexpensive solution to fall risk assessment in home settings or community healthcare center for the elderly. It has the potential to help prevent future falls in the elderly.
Hu, Xinyao; Zhao, Jun; Peng, Dongsheng
2018-01-01
Postural control is a complex skill based on the interaction of dynamic sensorimotor processes, and can be challenging for people with deficits in sensory functions. The foot plantar center of pressure (COP) has often been used for quantitative assessment of postural control. Previously, the foot plantar COP was mainly measured by force plates or complicated and expensive insole-based measurement systems. Although some low-cost instrumented insoles have been developed, their ability to accurately estimate the foot plantar COP trajectory was not robust. In this study, a novel individual-specific nonlinear model was proposed to estimate the foot plantar COP trajectories with an instrumented insole based on low-cost force sensitive resistors (FSRs). The model coefficients were determined by a least square error approximation algorithm. Model validation was carried out by comparing the estimated COP data with the reference data in a variety of postural control assessment tasks. We also compared our data with the COP trajectories estimated by the previously well accepted weighted mean approach. Comparing with the reference measurements, the average root mean square errors of the COP trajectories of both feet were 2.23 mm (±0.64) (left foot) and 2.72 mm (±0.83) (right foot) along the medial–lateral direction, and 9.17 mm (±1.98) (left foot) and 11.19 mm (±2.98) (right foot) along the anterior–posterior direction. The results are superior to those reported in previous relevant studies, and demonstrate that our proposed approach can be used for accurate foot plantar COP trajectory estimation. This study could provide an inexpensive solution to fall risk assessment in home settings or community healthcare center for the elderly. It has the potential to help prevent future falls in the elderly. PMID:29389857
Strecker, Claas; Meyer, Bernd
2018-05-29
Protein flexibility poses a major challenge to docking of potential ligands in that the binding site can adopt different shapes. Docking algorithms usually keep the protein rigid and only allow the ligand to be treated as flexible. However, a wrong assessment of the shape of the binding pocket can prevent a ligand from adapting a correct pose. Ensemble docking is a simple yet promising method to solve this problem: Ligands are docked into multiple structures, and the results are subsequently merged. Selection of protein structures is a significant factor for this approach. In this work we perform a comprehensive and comparative study evaluating the impact of structure selection on ensemble docking. We perform ensemble docking with several crystal structures and with structures derived from molecular dynamics simulations of renin, an attractive target for antihypertensive drugs. Here, 500 ns of MD simulations revealed binding site shapes not found in any available crystal structure. We evaluate the importance of structure selection for ensemble docking by comparing binding pose prediction, ability to rank actives above nonactives (screening utility), and scoring accuracy. As a result, for ensemble definition k-means clustering appears to be better suited than hierarchical clustering with average linkage. The best performing ensemble consists of four crystal structures and is able to reproduce the native ligand poses better than any individual crystal structure. Moreover this ensemble outperforms 88% of all individual crystal structures in terms of screening utility as well as scoring accuracy. Similarly, ensembles of MD-derived structures perform on average better than 75% of any individual crystal structure in terms of scoring accuracy at all inspected ensembles sizes.
Accelerated thermokarst formation in the McMurdo Dry Valleys, Antarctica.
Levy, Joseph S; Fountain, Andrew G; Dickson, James L; Head, James W; Okal, Marianne; Marchant, David R; Watters, Jaclyn
2013-01-01
Thermokarst is a land surface lowered and disrupted by melting ground ice. Thermokarst is a major driver of landscape change in the Arctic, but has been considered to be a minor process in Antarctica. Here, we use ground-based and airborne LiDAR coupled with timelapse imaging and meteorological data to show that 1) thermokarst formation has accelerated in Garwood Valley, Antarctica; 2) the rate of thermokarst erosion is presently ~ 10 times the average Holocene rate; and 3) the increased rate of thermokarst formation is driven most strongly by increasing insolation and sediment/albedo feedbacks. This suggests that sediment enhancement of insolation-driven melting may act similarly to expected increases in Antarctic air temperature (presently occurring along the Antarctic Peninsula), and may serve as a leading indicator of imminent landscape change in Antarctica that will generate thermokarst landforms similar to those in Arctic periglacial terrains.
A comparative study of satellite estimation for solar insolation in Albania with ground measurements
DOE Office of Scientific and Technical Information (OSTI.GOV)
Mitrushi, Driada, E-mail: driadamitrushi@yahoo.com; Berberi, Pëllumb, E-mail: pellumb.berberi@gmail.com; Muda, Valbona, E-mail: vmuda@hotmail.com
The main objective of this study is to compare data provided by Database of NASA with available ground data for regions covered by national meteorological net NASA estimates that their measurements of average daily solar radiation have a root-mean-square deviation RMSD error of 35 W/m{sup 2} (roughly 20% inaccuracy). Unfortunately valid data from meteorological stations for regions of interest are quite rare in Albania. In these cases, use of Solar Radiation Database of NASA would be a satisfactory solution for different case studies. Using a statistical method allows to determine most probable margins between to sources of data. Comparison of meanmore » insulation data provided by NASA with ground data of mean insulation provided by meteorological stations show that ground data for mean insolation results, in all cases, to be underestimated compared with data provided by Database of NASA. Converting factor is 1.149.« less
Accelerated thermokarst formation in the McMurdo Dry Valleys, Antarctica
Levy, Joseph S.; Fountain, Andrew G.; Dickson, James L.; Head, James W.; Okal, Marianne; Marchant, David R.; Watters, Jaclyn
2013-01-01
Thermokarst is a land surface lowered and disrupted by melting ground ice. Thermokarst is a major driver of landscape change in the Arctic, but has been considered to be a minor process in Antarctica. Here, we use ground-based and airborne LiDAR coupled with timelapse imaging and meteorological data to show that 1) thermokarst formation has accelerated in Garwood Valley, Antarctica; 2) the rate of thermokarst erosion is presently ~ 10 times the average Holocene rate; and 3) the increased rate of thermokarst formation is driven most strongly by increasing insolation and sediment/albedo feedbacks. This suggests that sediment enhancement of insolation-driven melting may act similarly to expected increases in Antarctic air temperature (presently occurring along the Antarctic Peninsula), and may serve as a leading indicator of imminent landscape change in Antarctica that will generate thermokarst landforms similar to those in Arctic periglacial terrains. PMID:23881292
Toward canonical ensemble distribution from self-guided Langevin dynamics simulation
NASA Astrophysics Data System (ADS)
Wu, Xiongwu; Brooks, Bernard R.
2011-04-01
This work derives a quantitative description of the conformational distribution in self-guided Langevin dynamics (SGLD) simulations. SGLD simulations employ guiding forces calculated from local average momentums to enhance low-frequency motion. This enhancement in low-frequency motion dramatically accelerates conformational search efficiency, but also induces certain perturbations in conformational distribution. Through the local averaging, we separate properties of molecular systems into low-frequency and high-frequency portions. The guiding force effect on the conformational distribution is quantitatively described using these low-frequency and high-frequency properties. This quantitative relation provides a way to convert between a canonical ensemble and a self-guided ensemble. Using example systems, we demonstrated how to utilize the relation to obtain canonical ensemble properties and conformational distributions from SGLD simulations. This development makes SGLD not only an efficient approach for conformational searching, but also an accurate means for conformational sampling.
NASA Astrophysics Data System (ADS)
Yarwindran, M.; Ibrahim, M.; Raveverma, P.
2017-04-01
There are many important roles of the orthotic insoles, such as for the convenience purpose of diabetic patient's foot problem, and also to enhance athlete's performance in sports. Therefore, highly customised insoles were in demand, where it has to be fabricated by moulding plaster of Paris on the person's leg to customise the insole. The main purpose of the paper is to study the ability to implement additive manufacturing technology in the fabrication process of customised orthotics insole. The recent invention of flexible material (Filaflex) in Fused Deposition Modelling is the most significant reason that makes this fabrication process possible. By implementing a new approach to the 3D scanning of the foot, we produced the computer-aided drafting (CAD) drawing which was able to modify to desired shape and dimension. After the editing has been completed, the file was converted to Stereolithography format file (STL) as to enable it to be printed using Makerware or any other related software by sending command (G-code) to Flashforge 3D printer. The printed insole was tested its fit, form and function (also known as 3F). In the end, printed insole performs the function test which measures the plantar pressure of the foot compared with bare foot. The results show that the insole distributes pressure well throughout the foot surface, in which it reduced the peak pressure to half from 218KPa to 109KPa. Hence, it is concluded that the method proposed in this paper can produce a functional insole so that it can be the alternative way to make customised orthotic insoles.
On the v-representability of ensemble densities of electron systems
NASA Astrophysics Data System (ADS)
Gonis, A.; Däne, M.
2018-05-01
Analogously to the case at zero temperature, where the density of the ground state of an interacting many-particle system determines uniquely (within an arbitrary additive constant) the external potential acting on the system, the thermal average of the density over an ensemble defined by the Boltzmann distribution at the minimum of the thermodynamic potential, or the free energy, determines the external potential uniquely (and not just modulo a constant) acting on a system described by this thermodynamic potential or free energy. The paper describes a formal procedure that generates the domain of a constrained search over general ensembles (at zero or elevated temperatures) that lead to a given density, including as a special case a density thermally averaged at a given temperature, and in the case of a v-representable density determines the external potential leading to the ensemble density. As an immediate consequence of the general formalism, the concept of v-representability is extended beyond the hitherto discussed case of ground state densities to encompass excited states as well. Specific application to thermally averaged densities solves the v-representability problem in connection with the Mermin functional in a manner analogous to that in which this problem was recently settled with respect to the Hohenberg and Kohn functional. The main formalism is illustrated with numerical results for ensembles of one-dimensional, non-interacting systems of particles under a harmonic potential.
On the v-representability of ensemble densities of electron systems
Gonis, A.; Dane, M.
2017-12-30
Analogously to the case at zero temperature, where the density of the ground state of an interacting many-particle system determines uniquely (within an arbitrary additive constant) the external potential acting on the system, the thermal average of the density over an ensemble defined by the Boltzmann distribution at the minimum of the thermodynamic potential, or the free energy, determines the external potential uniquely (and not just modulo a constant) acting on a system described by this thermodynamic potential or free energy. The study describes a formal procedure that generates the domain of a constrained search over general ensembles (at zeromore » or elevated temperatures) that lead to a given density, including as a special case a density thermally averaged at a given temperature, and in the case of a v-representable density determines the external potential leading to the ensemble density. As an immediate consequence of the general formalism, the concept of v-representability is extended beyond the hitherto discussed case of ground state densities to encompass excited states as well. Specific application to thermally averaged densities solves the v-representability problem in connection with the Mermin functional in a manner analogous to that in which this problem was recently settled with respect to the Hohenberg and Kohn functional. Finally, the main formalism is illustrated with numerical results for ensembles of one-dimensional, non-interacting systems of particles under a harmonic potential.« less
Post-processing method for wind speed ensemble forecast using wind speed and direction
NASA Astrophysics Data System (ADS)
Sofie Eide, Siri; Bjørnar Bremnes, John; Steinsland, Ingelin
2017-04-01
Statistical methods are widely applied to enhance the quality of both deterministic and ensemble NWP forecasts. In many situations, like wind speed forecasting, most of the predictive information is contained in one variable in the NWP models. However, in statistical calibration of deterministic forecasts it is often seen that including more variables can further improve forecast skill. For ensembles this is rarely taken advantage of, mainly due to that it is generally not straightforward how to include multiple variables. In this study, it is demonstrated how multiple variables can be included in Bayesian model averaging (BMA) by using a flexible regression method for estimating the conditional means. The method is applied to wind speed forecasting at 204 Norwegian stations based on wind speed and direction forecasts from the ECMWF ensemble system. At about 85 % of the sites the ensemble forecasts were improved in terms of CRPS by adding wind direction as predictor compared to only using wind speed. On average the improvements were about 5 %, but mainly for moderate to strong wind situations. For weak wind speeds adding wind direction had more or less neutral impact.
NASA Astrophysics Data System (ADS)
Soltanzadeh, I.; Azadi, M.; Vakili, G. A.
2011-07-01
Using Bayesian Model Averaging (BMA), an attempt was made to obtain calibrated probabilistic numerical forecasts of 2-m temperature over Iran. The ensemble employs three limited area models (WRF, MM5 and HRM), with WRF used with five different configurations. Initial and boundary conditions for MM5 and WRF are obtained from the National Centers for Environmental Prediction (NCEP) Global Forecast System (GFS) and for HRM the initial and boundary conditions come from analysis of Global Model Europe (GME) of the German Weather Service. The resulting ensemble of seven members was run for a period of 6 months (from December 2008 to May 2009) over Iran. The 48-h raw ensemble outputs were calibrated using BMA technique for 120 days using a 40 days training sample of forecasts and relative verification data. The calibrated probabilistic forecasts were assessed using rank histogram and attribute diagrams. Results showed that application of BMA improved the reliability of the raw ensemble. Using the weighted ensemble mean forecast as a deterministic forecast it was found that the deterministic-style BMA forecasts performed usually better than the best member's deterministic forecast.
Langevin equation with fluctuating diffusivity: A two-state model
NASA Astrophysics Data System (ADS)
Miyaguchi, Tomoshige; Akimoto, Takuma; Yamamoto, Eiji
2016-07-01
Recently, anomalous subdiffusion, aging, and scatter of the diffusion coefficient have been reported in many single-particle-tracking experiments, though the origins of these behaviors are still elusive. Here, as a model to describe such phenomena, we investigate a Langevin equation with diffusivity fluctuating between a fast and a slow state. Namely, the diffusivity follows a dichotomous stochastic process. We assume that the sojourn time distributions of these two states are given by power laws. It is shown that, for a nonequilibrium ensemble, the ensemble-averaged mean-square displacement (MSD) shows transient subdiffusion. In contrast, the time-averaged MSD shows normal diffusion, but an effective diffusion coefficient transiently shows aging behavior. The propagator is non-Gaussian for short time and converges to a Gaussian distribution in a long-time limit; this convergence to Gaussian is extremely slow for some parameter values. For equilibrium ensembles, both ensemble-averaged and time-averaged MSDs show only normal diffusion and thus we cannot detect any traces of the fluctuating diffusivity with these MSDs. Therefore, as an alternative approach to characterizing the fluctuating diffusivity, the relative standard deviation (RSD) of the time-averaged MSD is utilized and it is shown that the RSD exhibits slow relaxation as a signature of the long-time correlation in the fluctuating diffusivity. Furthermore, it is shown that the RSD is related to a non-Gaussian parameter of the propagator. To obtain these theoretical results, we develop a two-state renewal theory as an analytical tool.
The effect of textured ballet shoe insoles on ankle proprioception in dancers.
Steinberg, Nili; Waddington, Gordon; Adams, Roger; Karin, Janet; Tirosh, Oren
2016-01-01
Impaired ankle inversion movement discrimination (AIMD) can lead to ankle sprain injuries. The aim of this study was to explore whether wearing textured insoles improved AIMD compared with barefoot, ballet shoes and smooth insoles, among dancers. Forty-four adolescent male and female dancers, aged 13-19, from The Australian Ballet School were tested for AIMD while barefoot, wearing ballet shoes, smooth insoles, and textured insoles. No interaction was found between the four different footwear conditions, the two genders, or the two levels of dancers in AIMD (p > .05). An interaction was found between the four different footwear conditions and the three tertiles when tested in ballet shoes (p = .006). Although significant differences were found between the upper tertiles and the lower tertiles when tested with ballet shoes, barefoot and with smooth insoles (p < .001; p < .001; p = .047, respectively), when testing with textured insoles dancers in the lower tertile obtained similar scores to those obtained by dancers in the upper tertile (p = .911). Textured insoles improved the discrimination scores of dancers with low AIMD, suggesting that textured insoles may trigger the cutaneous receptors in the plantar surface, increasing the awareness of ankle positioning, which in turn might decrease the chance of ankle injury. Copyright © 2015 Elsevier Ltd. All rights reserved.
Fast and Slow Precipitation Responses to Individual Climate Forcers: A PDRMIP Multimodel Study
NASA Technical Reports Server (NTRS)
Samset, B. H.; Myhre, G.; Forster, P.M.; Hodnebrog, O.; Andrews, T.; Faluvegi, G.; Flaschner, D.; Kasoar, M.; Kharin, V.; Kirkevag, A.;
2016-01-01
Precipitation is expected to respond differently to various drivers of anthropogenic climate change. We present the first results from the Precipitation Driver and Response Model Intercomparison Project (PDRMIP), where nine global climate models have perturbed CO2, CH4, black carbon, sulfate, and solar insolation. We divide the resulting changes to global mean and regional precipitation into fast responses that scale with changes in atmospheric absorption and slow responses scaling with surface temperature change. While the overall features are broadly similar between models, we find significant regional intermodel variability, especially over land. Black carbon stands out as a component that may cause significant model diversity in predicted precipitation change. Processes linked to atmospheric absorption are less consistently modeled than those linked to top-of-atmosphere radiative forcing. We identify a number of land regions where the model ensemble consistently predicts that fast precipitation responses to climate perturbations dominate over the slow, temperature-driven responses.
NASA Astrophysics Data System (ADS)
Reusch, D. B.
2016-12-01
Any analysis that wants to use a GCM-based scenario of future climate benefits from knowing how much uncertainty the GCM's inherent variability adds to the development of climate change predictions. This is extra relevant in the polar regions due to the potential of global impacts (e.g., sea level rise) from local (ice sheet) climate changes such as more frequent/intense surface melting. High-resolution, regional-scale models using GCMs for boundary/initial conditions in future scenarios inherit a measure of GCM-derived externally-driven uncertainty. We investigate these uncertainties for the Greenland ice sheet using the 30-member CESM1.0-CAM5-BGC Large Ensemble (CESMLE) for recent (1981-2000) and future (2081-2100, RCP 8.5) decades. Recent simulations are skill-tested against the ERA-Interim reanalysis and AWS observations with results informing future scenarios. We focus on key variables influencing surface melting through decadal climatologies, nonlinear analysis of variability with self-organizing maps (SOMs), regional-scale modeling (Polar WRF), and simple melt models. Relative to the ensemble average, spatially averaged climatological July temperature anomalies over a Greenland ice-sheet/ocean domain are mostly between +/- 0.2 °C. The spatial average hides larger local anomalies of up to +/- 2 °C. The ensemble average itself is 2 °C cooler than ERA-Interim. SOMs extend our diagnostics by providing a concise, objective summary of model variability as a set of generalized patterns. For CESMLE, the SOM patterns summarize the variability of multiple realizations of climate. Changes in pattern frequency by ensemble member show the influence of initial conditions. For example, basic statistical analysis of pattern frequency yields interquartile ranges of 2-4% for individual patterns across the ensemble. In climate terms, this tells us about climate state variability through the range of the ensemble, a potentially significant source of melt-prediction uncertainty. SOMs can also capture the different trajectories of climate due to intramodel variability over time. Polar WRF provides higher resolution regional modeling with improved, polar-centric model physics. Simple melt models allow us to characterize impacts of the upstream uncertainties on estimates of surface melting.
NASA Astrophysics Data System (ADS)
Wang, W.; Zender, C. S.; van As, D.; Smeets, P.; van den Broeke, M.
2015-12-01
Surface melt and mass loss of Greenland Ice Sheet may play crucial roles in global climate change due to their positive feedbacks and large fresh water storage. With few other regular meteorological observations available in this extreme environment, measurements from Automatic Weather Stations (AWS) are the primary data source for the surface energy budget studies, and for validating satellite observations and model simulations. However, station tilt, due to surface melt and compaction, results in considerable biases in the radiation and thus albedo measurements by AWS. In this study, we identify the tilt-induced biases in the climatology of surface radiative flux and albedo, and then correct them based on geometrical principles. Over all the AWS from the Greenland Climate Network (GC-Net), the Kangerlussuaq transect (K-transect) and the Programme for Monitoring of the Greenland Ice Sheet (PROMICE), only ~15% of clear days have the correct solar noon time, with the largest bias to be 3 hours. Absolute hourly biases in the magnitude of surface insolation can reach up to 200 W/m2, with daily average exceeding 100 W/m2. The biases are larger in the accumulation zone due to the systematic tilt at each station, although variabilities of tilt angles are larger in the ablation zone. Averaged over the whole Greenland Ice Sheet in the melting season, the absolute bias in insolation is ~23 W/m2, enough to melt 0.51 m snow water equivalent. We estimate the tilt angles and their directions by comparing the simulated insolation at a horizontal surface with the observed insolation by these tilted AWS under clear-sky conditions. Our correction reduces the RMSE against satellite measurements and reanalysis by ~30 W/m2 relative to the uncorrected data, with correlation coefficients over 0.95 for both references. The corrected diurnal changes of albedo are more smooth, with consistent semi-smiling patterns (see Fig. 1). The seasonal cycles and annual variabilities of albedo are in a better agreement with previous studies (see Fig. 2 and 3). The consistent tilt-corrected shortwave radiation dataset derived here will provide better observations and validations for surface energy budget studies on Greenland Ice Sheet, including albedo variation, surface melt simulations and cloud radiative forcing estimates.
NASA Astrophysics Data System (ADS)
Pollard, David; Chang, Won; Haran, Murali; Applegate, Patrick; DeConto, Robert
2016-05-01
A 3-D hybrid ice-sheet model is applied to the last deglacial retreat of the West Antarctic Ice Sheet over the last ˜ 20 000 yr. A large ensemble of 625 model runs is used to calibrate the model to modern and geologic data, including reconstructed grounding lines, relative sea-level records, elevation-age data and uplift rates, with an aggregate score computed for each run that measures overall model-data misfit. Two types of statistical methods are used to analyze the large-ensemble results: simple averaging weighted by the aggregate score, and more advanced Bayesian techniques involving Gaussian process-based emulation and calibration, and Markov chain Monte Carlo. The analyses provide sea-level-rise envelopes with well-defined parametric uncertainty bounds, but the simple averaging method only provides robust results with full-factorial parameter sampling in the large ensemble. Results for best-fit parameter ranges and envelopes of equivalent sea-level rise with the simple averaging method agree well with the more advanced techniques. Best-fit parameter ranges confirm earlier values expected from prior model tuning, including large basal sliding coefficients on modern ocean beds.
Influence of custom-made and prefabricated insoles before and after an intense run
2017-01-01
Each time the foot contacts the ground during running there is a rapid deceleration that results in a shock wave that is transmitted from the foot to the head. The fatigue of the musculoskeletal system during running may decrease the ability of the body to absorb those shock waves and increase the risk of injury. Insoles are commonly prescribed to prevent injuries, and both custom-made and prefabricated insoles have been observed to reduce shock accelerations during running. However, no study to date has included a direct comparison of their behaviour measured over the same group of athletes, and therefore great controversy still exists regarding their effectiveness in reducing impact loading during running. The aim of the study was to analyse the acute differences in stride and shock parameters while running on a treadmill with custom-made and prefabricated insoles. Stride parameters (stride length, stride rate) and shock acceleration parameters (head and tibial peak acceleration, shock magnitude, acceleration rate, and shock attenuation) were measured using two triaxial accelerometers in 38 runners at 3.33 m/s before and after a 15-min intense run while using the sock liner of the shoe (control condition), prefabricated insoles and custom-made insoles. No differences in shock accelerations were found between the custom-made and the control insoles. The prefabricated insoles increased the head acceleration rate (post-fatigue, p = 0.029) compared to the control condition. The custom-made reduced tibial (pre-fatigue, p = 0.041) and head acceleration rates (pre-fatigue and post-fatigue, p = 0.01 and p = 0.046) compared to the prefabricated insoles. Neither the stride nor the acceleration parameters were modified as a result of the intense run. In the present study, the acute use of insoles (custom-made, prefabricated) did not reduce shock accelerations compared to the control insoles. Therefore, their effectiveness at protecting against injuries associated with elevated accelerations is not supported and remains unclear. PMID:28245273
Training set extension for SVM ensemble in P300-speller with familiar face paradigm.
Li, Qi; Shi, Kaiyang; Gao, Ning; Li, Jian; Bai, Ou
2018-03-27
P300-spellers are brain-computer interface (BCI)-based character input systems. Support vector machine (SVM) ensembles are trained with large-scale training sets and used as classifiers in these systems. However, the required large-scale training data necessitate a prolonged collection time for each subject, which results in data collected toward the end of the period being contaminated by the subject's fatigue. This study aimed to develop a method for acquiring more training data based on a collected small training set. A new method was developed in which two corresponding training datasets in two sequences are superposed and averaged to extend the training set. The proposed method was tested offline on a P300-speller with the familiar face paradigm. The SVM ensemble with extended training set achieved 85% classification accuracy for the averaged results of four sequences, and 100% for 11 sequences in the P300-speller. In contrast, the conventional SVM ensemble with non-extended training set achieved only 65% accuracy for four sequences, and 92% for 11 sequences. The SVM ensemble with extended training set achieves higher classification accuracies than the conventional SVM ensemble, which verifies that the proposed method effectively improves the classification performance of BCI P300-spellers, thus enhancing their practicality.
Toda, Yoshitaka; Tsukimura, Noriko
2004-10-01
To assess the effect of a lateral-wedge insole with elastic strapping of the subtalar joint on the femorotibial angle in patients with varus deformity of the knee. The efficacy of a wedged insole with subtalar straps and that of a traditional wedged insole shoe insert were compared. Sixty-six female outpatients with knee osteoarthritis (OA) were randomized (according to birth date) to be treated with either the strapped or the traditional inserted insole. Standing radiographs with unilateral insole use were used to analyze the femorotibial angles for each patient. In both groups, the baseline and 6-month visual analog scale (VAS) scores for subjective knee pain and the Lequesne index scores for knee OA were compared. The 61 patients who completed the 6-month study were evaluated. At baseline, there was no significant difference in the femorotibial angle (P = 0.66) and the VAS score (P = 0.75) between the 2 groups. At the 6-month assessment, the 29 subjects wearing the subtalar-strapped insole demonstrated a significantly decreased femorotibial angle (P < 0.0001) and significantly improved VAS scores (P = 0.001) and Lequesne index scores (P = 0.033) compared with their baseline assessments. These significant differences were not observed in the 32 subjects assigned to the traditional shoe-inserted wedged insole. These results suggest that an insole with a subtalar strap maintained the valgus correction of the femorotibial angle in patients with varus knee OA for 6 months, indicating longer-term clinical improvement with the strapped insert compared with the traditional insert. Copyright 2004 American College of Rheumatology
Abd El Megeid Abdallah, Amira Abdallah
2016-04-01
Increased impact loading is implicated in knee osteoarthritis development and progression. This study examined the impact ground reaction force (GRF) peak, its loading rate, its relative timing to stance phase timing, and walking speed during unilateral and bilateral use of laterally wedged insoles with arch supports. Within-subject design. Thirty-three female patients with medial knee osteoarthritis were examined with (unilateral 6° and 11°, and bilateral 0°, 6°, and 11°) and without insole use. Repeated measures MANOVA revealed that the impact force increased significantly in bilateral 11° versus unilateral 6° and without-insole conditions. The loading rate decreased significantly in unilateral 11° versus bilateral 6° insoles. The relative timing increased significantly in each of bilateral 6°, bilateral 11°, and unilateral 11° versus bilateral 0° insoles and in each of bilateral 11° and unilateral 11° versus without-insole condition. There were significant positive correlations between the walking speed and each of the force and loading rate. The Chi-square test revealed insignificant association between the insole condition and the presence of impact forces. Unilateral 11° insoles are capable of reducing impact loading possibly through increasing foot pronation. Walking slowly is another possible strategy to reduce loading. Unilaterally applied 11° laterally wedged insoles are capable of reducing and delaying the initial impact ground reaction forces and reducing their loading rates during walking in patients with medial knee osteoarthritis, thus reducing osteoarthritis progression. Walking slowly could also be used as a strategy to reduce impact loading. © The International Society for Prosthetics and Orthotics 2015.
Virtually optimized insoles for offloading the diabetic foot: A randomized crossover study.
Telfer, S; Woodburn, J; Collier, A; Cavanagh, P R
2017-07-26
Integration of objective biomechanical measures of foot function into the design process for insoles has been shown to provide enhanced plantar tissue protection for individuals at-risk of plantar ulceration. The use of virtual simulations utilizing numerical modeling techniques offers a potential approach to further optimize these devices. In a patient population at-risk of foot ulceration, we aimed to compare the pressure offloading performance of insoles that were optimized via numerical simulation techniques against shape-based devices. Twenty participants with diabetes and at-risk feet were enrolled in this study. Three pairs of personalized insoles: one based on shape data and subsequently manufactured via direct milling; and two were based on a design derived from shape, pressure, and ultrasound data which underwent a finite element analysis-based virtual optimization procedure. For the latter set of insole designs, one pair was manufactured via direct milling, and a second pair was manufactured through 3D printing. The offloading performance of the insoles was analyzed for forefoot regions identified as having elevated plantar pressures. In 88% of the regions of interest, the use of virtually optimized insoles resulted in lower peak plantar pressures compared to the shape-based devices. Overall, the virtually optimized insoles significantly reduced peak pressures by a mean of 41.3kPa (p<0.001, 95% CI [31.1, 51.5]) for milled and 40.5kPa (p<0.001, 95% CI [26.4, 54.5]) for printed devices compared to shape-based insoles. The integration of virtual optimization into the insole design process resulted in improved offloading performance compared to standard, shape-based devices. ISRCTN19805071, www.ISRCTN.org. Copyright © 2017 Elsevier Ltd. All rights reserved.
NASA Astrophysics Data System (ADS)
Oh, Seok-Geun; Suh, Myoung-Seok
2017-07-01
The projection skills of five ensemble methods were analyzed according to simulation skills, training period, and ensemble members, using 198 sets of pseudo-simulation data (PSD) produced by random number generation assuming the simulated temperature of regional climate models. The PSD sets were classified into 18 categories according to the relative magnitude of bias, variance ratio, and correlation coefficient, where each category had 11 sets (including 1 truth set) with 50 samples. The ensemble methods used were as follows: equal weighted averaging without bias correction (EWA_NBC), EWA with bias correction (EWA_WBC), weighted ensemble averaging based on root mean square errors and correlation (WEA_RAC), WEA based on the Taylor score (WEA_Tay), and multivariate linear regression (Mul_Reg). The projection skills of the ensemble methods improved generally as compared with the best member for each category. However, their projection skills are significantly affected by the simulation skills of the ensemble member. The weighted ensemble methods showed better projection skills than non-weighted methods, in particular, for the PSD categories having systematic biases and various correlation coefficients. The EWA_NBC showed considerably lower projection skills than the other methods, in particular, for the PSD categories with systematic biases. Although Mul_Reg showed relatively good skills, it showed strong sensitivity to the PSD categories, training periods, and number of members. On the other hand, the WEA_Tay and WEA_RAC showed relatively superior skills in both the accuracy and reliability for all the sensitivity experiments. This indicates that WEA_Tay and WEA_RAC are applicable even for simulation data with systematic biases, a short training period, and a small number of ensemble members.
Bagherzadeh Cham, Masumeh; Mohseni-Bandpei, Mohammad Ali; Bahramizadeh, Mahmood; Kalbasi, Saeed; Biglarian, Akbar
2018-06-01
Peripheral sensory neuropathy seems to be the main risk factor for diabetic foot ulceration. Previous studies demonstrated that stochastic resonance can improve the vibrotactile sensation of diabetic patients. The aim of this study was to evaluate the effects of Vibro-medical insole on pressure and vibration sensation in diabetic patients with mild-to-moderate peripheral neuropathy. A total of 20 patients with mild-to-moderate diabetic neuropathy were included in the pre-test and post-test clinical trial study. Vibro-medical insole consists of medical insole and vibratory system. Medical insole was made independently for each participant and vibratory system was inserted in it. Pressure and vibration sensation were evaluated before and after 30-min walking with Vibro-medical insole. Semmes-Weinstein monofilaments and tuning fork were used to evaluate pressure and vibration sensation, respectively. Pressure sensation showed significantly improvement using Vibro-medical insole at the heel, first and fifth metatarsophalangeal heads, and hallux of both feet in all participants (p < 0.001). Vibration sensation also improved at the big toe of both feet with 256 Hz tuning fork (p < 0.05) but no statistically significant effect was found with 128 Hz tuning fork (p > 0.05). Vibro-medical insole significantly improved pressure and vibration sensation of the foot in diabetic patients with mild-to-moderate peripheral neuropathy. The results suggest that Vibro-medical insole can be used for daily living activities to overcome sensory loss in diabetic neuropathy patients.
Effects of Textured Insoles on Balance in People with Parkinson’s Disease
Qiu, Feng; Cole, Michael H.; Davids, Keith W.; Hennig, Ewald M.; Silburn, Peter A.; Netscher, Heather; Kerr, Graham K.
2013-01-01
Background Degradation of the somatosensory system has been implicated in postural instability and increased falls risk for older people and Parkinson’s disease (PD) patients. Here we demonstrate that textured insoles provide a passive intervention that is an inexpensive and accessible means to enhance the somatosensory input from the plantar surface of the feet. Methods 20 healthy older adults (controls) and 20 participants with PD were recruited for the study. We evaluated effects of manipulating somatosensory information from the plantar surface of the feet using textured insoles. Participants performed standing tests, on two different surfaces (firm and foam), under three footwear conditions: 1) barefoot; 2) smooth insoles; and 3) textured insoles. Standing balance was evaluated using a force plate yielding data on the range of anterior-posterior and medial-lateral sway, as well as standard deviations for anterior-posterior and medial-lateral sway. Results On the firm surface with eyes open both the smooth and textured insoles reduced medial-lateral sway in the PD group to a similar level as the controls. Only the textured insole decreased medial-lateral sway and medial-lateral sway standard deviation in the PD group on both surfaces, with and without visual input. Greatest benefits were observed in the PD group while wearing the textured insoles, and when standing on the foam surface with eyes closed. Conclusions Data suggested that textured insoles may provide a low-cost means of improving postural stability in high falls-risk groups, such as people with PD. PMID:24349486
Self-averaging and weak ergodicity breaking of diffusion in heterogeneous media
NASA Astrophysics Data System (ADS)
Russian, Anna; Dentz, Marco; Gouze, Philippe
2017-08-01
Diffusion in natural and engineered media is quantified in terms of stochastic models for the heterogeneity-induced fluctuations of particle motion. However, fundamental properties such as ergodicity and self-averaging and their dependence on the disorder distribution are often not known. Here, we investigate these questions for diffusion in quenched disordered media characterized by spatially varying retardation properties, which account for particle retention due to physical or chemical interactions with the medium. We link self-averaging and ergodicity to the disorder sampling efficiency Rn, which quantifies the number of disorder realizations a noise ensemble may sample in a single disorder realization. Diffusion for disorder scenarios characterized by a finite mean transition time is ergodic and self-averaging for any dimension. The strength of the sample to sample fluctuations decreases with increasing spatial dimension. For an infinite mean transition time, particle motion is weakly ergodicity breaking in any dimension because single particles cannot sample the heterogeneity spectrum in finite time. However, even though the noise ensemble is not representative of the single-particle time statistics, subdiffusive motion in q ≥2 dimensions is self-averaging, which means that the noise ensemble in a single realization samples a representative part of the heterogeneity spectrum.
Reading the climate record of the martian polar layered deposits
Hvidberg, C.S.; Fishbaugh, K.E.; Winstrup, M.; Svensson, A.; Byrne, S.; Herkenhoff, K. E.
2012-01-01
The martian polar regions have layered deposits of ice and dust. The stratigraphy of these deposits is exposed within scarps and trough walls and is thought to have formed due to climate variations in the past. Insolation has varied significantly over time and caused dramatic changes in climate, but it has remained unclear whether insolation variations could be linked to the stratigraphic record. We present a model of layer formation based on physical processes that expresses polar deposition rates of ice and dust in terms of insolation. In this model, layer formation is controlled by the insolation record, and dust-rich layers form by two mechanisms: (1) increased summer sublimation during high obliquity, and (2) variations in the polar deposition of dust modulated by obliquity variations. The model is simple, yet physically plausible, and allows for investigations of the climate control of the polar layered deposits (PLD). We compare the model to a stratigraphic column obtained from the north polar layered deposits (NPLD) (Fishbaugh, K.E., Hvidberg, C.S., Byrne, S., Russel, P.S., Herkenhoff, K.E., Winstrup, M., Kirk, R. [2010a]. Geophys. Res. Lett., 37, L07201) and show that the model can be tuned to reproduce complex layer sequences. The comparison with observations cannot uniquely constrain the PLD chronology, and it is limited by our interpretation of the observed stratigraphic column as a proxy for NPLD composition. We identified, however, a set of parameters that provides a chronology of the NPLD tied to the insolation record and consistently explains layer formation in accordance with observations of NPLD stratigraphy. This model dates the top 500 m of the NPLD back to ∼1 million years with an average net deposition rate of ice and dust of 0.55 mm a−1. The model stratigraphy contains a quasi-periodic ∼30 m cycle, similar to a previously suggested cycle in brightness profiles from the NPLD (Laskar, J., Levrard, B., Mustard, F. [2002]. Nature, 419, 375–377; Milkovich, S., Head, J.W. [2005]. J. Geophys. Res. 110), but here related to half of the obliquity cycles of 120 and 99 kyr and resulting from a combination of the two layer formation mechanisms. Further investigations of the non-linear insolation control of PLD formation should consider data from other geographical locations and include radar data and other stratigraphic datasets that can constrain the composition and stratigraphy of the NPLD layers.
Influence of foot orthosis customisation on perceived comfort during running.
Lucas-Cuevas, A G; Pérez-Soriano, P; Priego-Quesada, J I; Llana-Belloch, S
2014-01-01
Although running is associated with many health benefits, it also exposes the body to greater risk of injury. Foot orthoses are an effective strategy to prevent such injuries. Comfort is an essential element in orthosis design since any discomfort alters the runner's biomechanics, compromising performance and increasing the risk of injury. The present study analyses the perceived comfort of three types of orthoses: custom-made, prefabricated and original running shoe insoles. Nine comfort variables for each insole were assessed in a sample of 40 runners. Custom-made and prefabricated insoles were both perceived as significantly more comfortable than the original insoles. The differences were clinically relevant and were potentially causes of modifications in running gait. Although the prefabricated insoles were rated slightly higher than the custom-made insoles, the differences were not statistically significant. This study shows that prefabricated insoles constitute a reasonable alternative to custom-made insoles in terms of comfort. The perceived level of comfort of footwear is considered to be a protective measure of the potential risk of running injuries. We here compared runners' perception of comfort of custom-made and prefabricated orthoses while running. We found that even though custom-made orthoses are closely matched to each individual's foot, such customisation does not necessarily imply greater comfort.
Ensemble Weight Enumerators for Protograph LDPC Codes
NASA Technical Reports Server (NTRS)
Divsalar, Dariush
2006-01-01
Recently LDPC codes with projected graph, or protograph structures have been proposed. In this paper, finite length ensemble weight enumerators for LDPC codes with protograph structures are obtained. Asymptotic results are derived as the block size goes to infinity. In particular we are interested in obtaining ensemble average weight enumerators for protograph LDPC codes which have minimum distance that grows linearly with block size. As with irregular ensembles, linear minimum distance property is sensitive to the proportion of degree-2 variable nodes. In this paper the derived results on ensemble weight enumerators show that linear minimum distance condition on degree distribution of unstructured irregular LDPC codes is a sufficient but not a necessary condition for protograph LDPC codes.
Assessing Walking Strategies Using Insole Pressure Sensors for Stroke Survivors.
Munoz-Organero, Mario; Parker, Jack; Powell, Lauren; Mawson, Susan
2016-10-01
Insole pressure sensors capture the different forces exercised over the different parts of the sole when performing tasks standing up such as walking. Using data analysis and machine learning techniques, common patterns and strategies from different users to achieve different tasks can be automatically extracted. In this paper, we present the results obtained for the automatic detection of different strategies used by stroke survivors when walking as integrated into an Information Communication Technology (ICT) enhanced Personalised Self-Management Rehabilitation System (PSMrS) for stroke rehabilitation. Fourteen stroke survivors and 10 healthy controls have participated in the experiment by walking six times a distance from chair to chair of approximately 10 m long. The Rivermead Mobility Index was used to assess the functional ability of each individual in the stroke survivor group. Several walking strategies are studied based on data gathered from insole pressure sensors and patterns found in stroke survivor patients are compared with average patterns found in healthy control users. A mechanism to automatically estimate a mobility index based on the similarity of the pressure patterns to a stereotyped stride is also used. Both data gathered from stroke survivors and healthy controls are used to evaluate the proposed mechanisms. The output of trained algorithms is applied to the PSMrS system to provide feedback on gait quality enabling stroke survivors to self-manage their rehabilitation.
NASA Astrophysics Data System (ADS)
Wei, Jiangfeng; Dirmeyer, Paul A.; Yang, Zong-Liang; Chen, Haishan
2017-10-01
Through a series of model simulations with an atmospheric general circulation model coupled to three different land surface models, this study investigates the impacts of land model ensembles and coupled model ensemble on precipitation simulation. It is found that coupling an ensemble of land models to an atmospheric model has a very minor impact on the improvement of precipitation climatology and variability, but a simple ensemble average of the precipitation from three individually coupled land-atmosphere models produces better results, especially for precipitation variability. The generally weak impact of land processes on precipitation should be the main reason that the land model ensembles do not improve precipitation simulation. However, if there are big biases in the land surface model or land surface data set, correcting them could improve the simulated climate, especially for well-constrained regional climate simulations.
DOE Office of Scientific and Technical Information (OSTI.GOV)
Ortoleva, Peter J.
Illustrative embodiments of systems and methods for the deductive multiscale simulation of macromolecules are disclosed. In one illustrative embodiment, a deductive multiscale simulation method may include (i) constructing a set of order parameters that model one or more structural characteristics of a macromolecule, (ii) simulating an ensemble of atomistic configurations for the macromolecule using instantaneous values of the set of order parameters, (iii) simulating thermal-average forces and diffusivities for the ensemble of atomistic configurations, and (iv) evolving the set of order parameters via Langevin dynamics using the thermal-average forces and diffusivities.
Outdoor module testing and comparison of photovoltaic technologies
NASA Astrophysics Data System (ADS)
Fabick, L. B.; Rifai, R.; Mitchell, K.; Woolston, T.; Canale, J.
A comparison of outdoor test results for several module technologies is presented. The technologies include thin-film silicon:hydrogen alloys (TFS), TFS modules with semitransparent conductor back contacts, and CuInSe2 module prototypes. A method for calculating open-circuit voltage and fill-factor temperature coefficients is proposed. The method relies on the acquisition of large statistical data samples to average effects due to varying insolation level.
Short and Long-Term Sunlight Radiation and Stroke Incidence
McClure, Leslie A.; Judd, Suzanne E.; Howard, Virginia J.; Crosson, William L.; Al-Hamdan, Mohammad Z.; Wadley, Virginia G.; Peace, Fredrick; Kabagambe, Edmond K.
2012-01-01
OBJECTIVE Examine whether long and short-term sunlight radiation is related to stroke incidence. METHODS Fifteen-year residential histories merged with satellite, ground monitor, and model reanalysis data were used to determine sunlight radiation (insolation) and temperature exposure for a cohort of 16,606 stroke and coronary artery disease free black and white participants aged 45+ from the 48 contiguous United States. Fifteen, ten, five, two and one-year exposures were used to predict stroke incidence during follow-up in Cox proportional hazard models. Potential confounders and mediators were included during model-building. RESULTS Shorter exposure periods exhibited similar, but slightly stronger relationships than longer exposure periods. After adjustment for other covariates, the previous year’s monthly average insolation exposure below the median gave an HR=1.61 (95% CI: 1.15, 2.26) and the previous year’s highest compared to the second highest quartile of monthly average maximum temperature exposure gave an HR=1.92 (1.27, 2.92). INTERPRETATION These results indicate a relationship between lower levels of sunlight radiation and higher stroke incidence. The biological pathway of this relationship is not clear. Future research will show whether this finding stands, the pathway for this relationship, and if it is due to short or long-term exposures. PMID:23225379
Optimal averaging of soil moisture predictions from ensemble land surface model simulations
USDA-ARS?s Scientific Manuscript database
The correct interpretation of ensemble information obtained from the parallel implementation of multiple land surface models (LSMs) requires information concerning the LSM ensemble’s mutual error covariance. Here we propose a new technique for obtaining such information using an instrumental variabl...
DOE Office of Scientific and Technical Information (OSTI.GOV)
Liu, Yawen; Zhang, Kai; Qian, Yun
Aerosols from fire emissions can potentially have large impact on clouds and radiation. However, fire aerosol sources are often intermittent, and their effect on weather and climate is difficult to quantify. Here we investigated the short-term effective radiative forcing of fire aerosols using the global aerosol–climate model Community Atmosphere Model version 5 (CAM5). Different from previous studies, we used nudged hindcast ensembles to quantify the forcing uncertainty due to the chaotic response to small perturbations in the atmosphere state. Daily mean emissions from three fire inventories were used to consider the uncertainty in emission strength and injection heights. The simulated aerosolmore » optical depth (AOD) and mass concentrations were evaluated against in situ measurements and reanalysis data. Overall, the results show the model has reasonably good predicting skills. Short (10-day) nudged ensemble simulations were then performed with and without fire emissions to estimate the effective radiative forcing. Results show fire aerosols have large effects on both liquid and ice clouds over the two selected regions in April 2009. Ensemble mean results show strong negative shortwave cloud radiative effect (SCRE) over almost the entirety of southern Mexico, with a 10-day regional mean value of –3.0 W m –2. Over the central US, the SCRE is positive in the north but negative in the south, and the regional mean SCRE is small (–0.56 W m –2). For the 10-day average, we found a large ensemble spread of regional mean shortwave cloud radiative effect over southern Mexico (15.6 % of the corresponding ensemble mean) and the central US (64.3 %), despite the regional mean AOD time series being almost indistinguishable during the 10-day period. Moreover, the ensemble spread is much larger when using daily averages instead of 10-day averages. In conclusion, this demonstrates the importance of using a large ensemble of simulations to estimate the short-term aerosol effective radiative forcing.« less
Liu, Yawen; Zhang, Kai; Qian, Yun; ...
2018-01-03
Aerosols from fire emissions can potentially have large impact on clouds and radiation. However, fire aerosol sources are often intermittent, and their effect on weather and climate is difficult to quantify. Here we investigated the short-term effective radiative forcing of fire aerosols using the global aerosol–climate model Community Atmosphere Model version 5 (CAM5). Different from previous studies, we used nudged hindcast ensembles to quantify the forcing uncertainty due to the chaotic response to small perturbations in the atmosphere state. Daily mean emissions from three fire inventories were used to consider the uncertainty in emission strength and injection heights. The simulated aerosolmore » optical depth (AOD) and mass concentrations were evaluated against in situ measurements and reanalysis data. Overall, the results show the model has reasonably good predicting skills. Short (10-day) nudged ensemble simulations were then performed with and without fire emissions to estimate the effective radiative forcing. Results show fire aerosols have large effects on both liquid and ice clouds over the two selected regions in April 2009. Ensemble mean results show strong negative shortwave cloud radiative effect (SCRE) over almost the entirety of southern Mexico, with a 10-day regional mean value of –3.0 W m –2. Over the central US, the SCRE is positive in the north but negative in the south, and the regional mean SCRE is small (–0.56 W m –2). For the 10-day average, we found a large ensemble spread of regional mean shortwave cloud radiative effect over southern Mexico (15.6 % of the corresponding ensemble mean) and the central US (64.3 %), despite the regional mean AOD time series being almost indistinguishable during the 10-day period. Moreover, the ensemble spread is much larger when using daily averages instead of 10-day averages. In conclusion, this demonstrates the importance of using a large ensemble of simulations to estimate the short-term aerosol effective radiative forcing.« less
Elsawy, Amr S; Eldawlatly, Seif; Taher, Mohamed; Aly, Gamal M
2014-01-01
The current trend to use Brain-Computer Interfaces (BCIs) with mobile devices mandates the development of efficient EEG data processing methods. In this paper, we demonstrate the performance of a Principal Component Analysis (PCA) ensemble classifier for P300-based spellers. We recorded EEG data from multiple subjects using the Emotiv neuroheadset in the context of a classical oddball P300 speller paradigm. We compare the performance of the proposed ensemble classifier to the performance of traditional feature extraction and classifier methods. Our results demonstrate the capability of the PCA ensemble classifier to classify P300 data recorded using the Emotiv neuroheadset with an average accuracy of 86.29% on cross-validation data. In addition, offline testing of the recorded data reveals an average classification accuracy of 73.3% that is significantly higher than that achieved using traditional methods. Finally, we demonstrate the effect of the parameters of the P300 speller paradigm on the performance of the method.
Real-Time Ensemble Forecasting of Coronal Mass Ejections Using the Wsa-Enlil+Cone Model
NASA Astrophysics Data System (ADS)
Mays, M. L.; Taktakishvili, A.; Pulkkinen, A. A.; Odstrcil, D.; MacNeice, P. J.; Rastaetter, L.; LaSota, J. A.
2014-12-01
Ensemble forecasting of coronal mass ejections (CMEs) provides significant information in that it provides an estimation of the spread or uncertainty in CME arrival time predictions. Real-time ensemble modeling of CME propagation is performed by forecasters at the Space Weather Research Center (SWRC) using the WSA-ENLIL+cone model available at the Community Coordinated Modeling Center (CCMC). To estimate the effect of uncertainties in determining CME input parameters on arrival time predictions, a distribution of n (routinely n=48) CME input parameter sets are generated using the CCMC Stereo CME Analysis Tool (StereoCAT) which employs geometrical triangulation techniques. These input parameters are used to perform n different simulations yielding an ensemble of solar wind parameters at various locations of interest, including a probability distribution of CME arrival times (for hits), and geomagnetic storm strength (for Earth-directed hits). We present the results of ensemble simulations for a total of 38 CME events in 2013-2014. For 28 of the ensemble runs containing hits, the observed CME arrival was within the range of ensemble arrival time predictions for 14 runs (half). The average arrival time prediction was computed for each of the 28 ensembles predicting hits and using the actual arrival time, an average absolute error of 10.0 hours (RMSE=11.4 hours) was found for all 28 ensembles, which is comparable to current forecasting errors. Some considerations for the accuracy of ensemble CME arrival time predictions include the importance of the initial distribution of CME input parameters, particularly the mean and spread. When the observed arrivals are not within the predicted range, this still allows the ruling out of prediction errors caused by tested CME input parameters. Prediction errors can also arise from ambient model parameters such as the accuracy of the solar wind background, and other limitations. Additionally the ensemble modeling sysem was used to complete a parametric event case study of the sensitivity of the CME arrival time prediction to free parameters for ambient solar wind model and CME. The parameter sensitivity study suggests future directions for the system, such as running ensembles using various magnetogram inputs to the WSA model.
Huisman, J.A.; Breuer, L.; Bormann, H.; Bronstert, A.; Croke, B.F.W.; Frede, H.-G.; Graff, T.; Hubrechts, L.; Jakeman, A.J.; Kite, G.; Lanini, J.; Leavesley, G.; Lettenmaier, D.P.; Lindstrom, G.; Seibert, J.; Sivapalan, M.; Viney, N.R.; Willems, P.
2009-01-01
An ensemble of 10 hydrological models was applied to the same set of land use change scenarios. There was general agreement about the direction of changes in the mean annual discharge and 90% discharge percentile predicted by the ensemble members, although a considerable range in the magnitude of predictions for the scenarios and catchments under consideration was obvious. Differences in the magnitude of the increase were attributed to the different mean annual actual evapotranspiration rates for each land use type. The ensemble of model runs was further analyzed with deterministic and probabilistic ensemble methods. The deterministic ensemble method based on a trimmed mean resulted in a single somewhat more reliable scenario prediction. The probabilistic reliability ensemble averaging (REA) method allowed a quantification of the model structure uncertainty in the scenario predictions. It was concluded that the use of a model ensemble has greatly increased our confidence in the reliability of the model predictions. ?? 2008 Elsevier Ltd.
Steinberg, Nili; Waddington, Gordon; Adams, Roger; Karin, Janet; Tirosh, Oren
2015-12-01
Ballet dancers require a high level of postural balance (PB) and proprioception ability during performance. As textured insoles inserted into ballet shoes were found to improve proprioception ability, and better proprioceptive acuity was associated with better PB, the aim of the present study was to investigate whether the association between ankle inversion movement discrimination (AIMD) and PB changed following wearing textured insoles in young male and female dancers. Forty-four dancers from the Australian Ballet School, ages 14-19 yrs, were tested for static and dynamic PB and AIMD under two conditions: in ballet shoes, and in ballet shoes with textured insoles inserted. Female dancers demonstrated a significant inverse relationship between AIMD and static PB in the medio-lateral direction when wearing ballet shoes, but not when wearing textured insoles. Male dancers showed a non-monotonic relationship when tested with ballet shoes only, but a significant inverse relationship between AIMD and dynamic PB in the vertical direction and with the waist/head cross-correlation acceleration in the three movement directions when they were tested with textured insoles. Male dancers demonstrated an improved association between dynamic PB and proprioception ability when using textured insoles, suggesting that the increased afferent information from the plantar surface had a beneficial effect on proprioception feedback about their PB. Conversely, for female dancers, that association was present when wearing ballet shoes, but not when using textured insoles, suggesting that the increased afferent information for female dancers who already had high proprioception ability was "overloaded" by wearing the textured insoles.
Quantifying Nucleic Acid Ensembles with X-ray Scattering Interferometry.
Shi, Xuesong; Bonilla, Steve; Herschlag, Daniel; Harbury, Pehr
2015-01-01
The conformational ensemble of a macromolecule is the complete description of the macromolecule's solution structures and can reveal important aspects of macromolecular folding, recognition, and function. However, most experimental approaches determine an average or predominant structure, or follow transitions between states that each can only be described by an average structure. Ensembles have been extremely difficult to experimentally characterize. We present the unique advantages and capabilities of a new biophysical technique, X-ray scattering interferometry (XSI), for probing and quantifying structural ensembles. XSI measures the interference of scattered waves from two heavy metal probes attached site specifically to a macromolecule. A Fourier transform of the interference pattern gives the fractional abundance of different probe separations directly representing the multiple conformation states populated by the macromolecule. These probe-probe distance distributions can then be used to define the structural ensemble of the macromolecule. XSI provides accurate, calibrated distance in a model-independent fashion with angstrom scale sensitivity in distances. XSI data can be compared in a straightforward manner to atomic coordinates determined experimentally or predicted by molecular dynamics simulations. We describe the conceptual framework for XSI and provide a detailed protocol for carrying out an XSI experiment. © 2015 Elsevier Inc. All rights reserved.
Chatzistergos, Panagiotis E; Naemi, Roozbeh; Chockalingam, Nachiappan
2015-06-01
This study aims to develop a numerical method that can be used to investigate the cushioning properties of different insole materials on a subject-specific basis. Diabetic footwear and orthotic insoles play an important role for the reduction of plantar pressure in people with diabetes (type-2). Despite that, little information exists about their optimum cushioning properties. A new in-vivo measurement based computational procedure was developed which entails the generation of 2D subject-specific finite element models of the heel pad based on ultrasound indentation. These models are used to inverse engineer the material properties of the heel pad and simulate the contact between plantar soft tissue and a flat insole. After its validation this modelling procedure was utilised to investigate the importance of plantar soft tissue stiffness, thickness and loading for the correct selection of insole material. The results indicated that heel pad stiffness and thickness influence plantar pressure but not the optimum insole properties. On the other hand loading appears to significantly influence the optimum insole material properties. These results indicate that parameters that affect the loading of the plantar soft tissues such as body mass or a person's level of physical activity should be carefully considered during insole material selection. Copyright © 2015 IPEM. Published by Elsevier Ltd. All rights reserved.
The Cold and Icy Heart of Pluto
NASA Astrophysics Data System (ADS)
Hamilton, D. P.
2015-12-01
The locations of large deposits of frozen volatiles on planetary surfaces are largely coincident with areas receiving the minimum annual influx of solar energy. Thus we have the familiar polar caps of Earth and Mars, but cold equatorial regions for planets with obliquities between 54 and 126 degrees. Furthermore, for tilts between 45-66 degrees and 114-135 degrees the minimum incident energy occurs neither at the pole nor the equator. We find that the annual average insolation is always symmetric about Pluto's equator and is fully independent of the relative locations of the planet's pericenter and equinoxes. Remarkably, this symmetry holds for arbitrary orbital eccentricities and obliquities, and so we provide a short proof in the margin of this abstract. The current obliquity of Pluto is 119 degrees, giving it minima in average annual insolation at +/- 27 degrees latitude, with ~1.5% more flux to the equator and ~15% more to the poles. But the obliquity of Pluto also varies sinusoidally from 102-126 degrees and so, over the past million years, Pluto's annual equatorial and polar fluxes have changed by +15% and -13%, respectively. Interestingly, the energy flux received by latitudes between 25-35 degrees remains nearly constant over the presumably billions of years since Pluto acquired its current orbit and spin properties. Thus these latitudes are continuously cold and should be favored for the long-term deposition of volatile ices; the bright heart of Pluto, Sputnik Planum, extends not coincidentally across these latitudes. Reflected light and emitted thermal radiation from Charon increases annual insolation to one side of Pluto by of order 0.02%. Although small, the bulk of the energy is delivered at night to Pluto's cold equatorial regions. Furthermore, Charon's thermal IR is delivered very efficiently to icy deposits. Over billions of years, ices have preferentially formed and survived in the anti-Charon hemisphere.
Optimal averaging of soil moisture predictions from ensemble land surface model simulations
USDA-ARS?s Scientific Manuscript database
The correct interpretation of ensemble 3 soil moisture information obtained from the parallel implementation of multiple land surface models (LSMs) requires information concerning the LSM ensemble’s mutual error covariance. Here we propose a new technique for obtaining such information using an inst...
Ozcift, Akin; Gulten, Arif
2011-12-01
Improving accuracies of machine learning algorithms is vital in designing high performance computer-aided diagnosis (CADx) systems. Researches have shown that a base classifier performance might be enhanced by ensemble classification strategies. In this study, we construct rotation forest (RF) ensemble classifiers of 30 machine learning algorithms to evaluate their classification performances using Parkinson's, diabetes and heart diseases from literature. While making experiments, first the feature dimension of three datasets is reduced using correlation based feature selection (CFS) algorithm. Second, classification performances of 30 machine learning algorithms are calculated for three datasets. Third, 30 classifier ensembles are constructed based on RF algorithm to assess performances of respective classifiers with the same disease data. All the experiments are carried out with leave-one-out validation strategy and the performances of the 60 algorithms are evaluated using three metrics; classification accuracy (ACC), kappa error (KE) and area under the receiver operating characteristic (ROC) curve (AUC). Base classifiers succeeded 72.15%, 77.52% and 84.43% average accuracies for diabetes, heart and Parkinson's datasets, respectively. As for RF classifier ensembles, they produced average accuracies of 74.47%, 80.49% and 87.13% for respective diseases. RF, a newly proposed classifier ensemble algorithm, might be used to improve accuracy of miscellaneous machine learning algorithms to design advanced CADx systems. Copyright © 2011 Elsevier Ireland Ltd. All rights reserved.
Feuilhade de Chauvin, M
2012-07-01
Shoes worn with bare feet function as a fungal reservoir and lead to persistent dermatophytosis. This study was designed to evaluate two formulations of terbinafine (1% spray powder or solution) to treat the insoles of shoes colonized by skin scales infected with Trichophyton rubrum and to determine the contact time necessary to achieve decontamination. Infected skin scales weighing 0.5 g, taken from the feet of patients with confirmed T. rubrum infection, was dispersed onto insoles pre-moistened with sterile saline solution (to mimic perspiration). Three types of insole were tested (felt, latex, leather). After inoculation, insoles were placed separately in new cardboard boxes at ambient temperature, and re-humidified with sterile normal saline solution for 48 h before being treated; untreated insoles served as controls. Scales were scraped off at 48 h or 96 h, and dropped into tubes of Sabouraud agar, incubated at 27°C and examined at 3 and 6 weeks. Cultures from all control insoles showed numerous T. rubrum colonies. In contrast, cultures from all insoles treated with a single application of terbinafine 1% spray solution or powder, and taken after 48 h or 96 h contact with the product, remained sterile at 3 weeks and 6 weeks. This study demonstrated the successful treatment of insoles colonized by T. rubrum-infected skin scales. Terbinafine 1% spray solution and powder showed good efficacy; the dermatophyte could no longer be cultured 48 h after a single application of terbinafine. © 2011 The Author. Journal of the European Academy of Dermatology and Venereology © 2011 European Academy of Dermatology and Venereology.
Determination of Martian Northern Polar Insolation Levels Using a Geodetic Elevation Model
NASA Technical Reports Server (NTRS)
Arrell, J. R.; Zuber, M. T.
2000-01-01
Solar insolation levels at the Martian polar caps bear significantly on the seasonal and climatic cycling of volatiles on that planet. In the northern hemisphere, the Martian surface slopes downhill from the equator to the pole such that the north polar cap is situated in a 5-km-deep hemispheric-scale depression. This large-scale topographic setting plays an important role in the insolation of the northern polar cap. Elevations measured by the Mars Orbiter Laser Altimeter (MOLA) provide comprehensive, high-accuracy topographical information required to precisely determine polar insolation. In this study, we employ a geodetic elevation model to quantify the north polar insolation and consider implications for seasonal and climatic changes. Additional information is contained in original extended abstract.
Performance of Emcore Third Generation CPV Modules in the Low Latitude Marine Environment of Hawaii
NASA Astrophysics Data System (ADS)
Hoffman, Richard; Buie, Damien; King, David; Glesne, Thomas
2011-12-01
Emcore third generation concentrating photovoltaic (CPV) modules were evaluated in the low latitude location of Kihei, Hawaii. For comparison, the best available monocrystalline silicon flat panel modules were included in both dual-axis tracked and fixed mount configurations. The daily DC uncorrected efficiency value for the CPV modules averaged over the six-month performance period was 25.9% compared to 16% to 17% for the flat panels. Higher daily energy was obtained from CPV modules than tracked flat panels when daily direct solar insolation was greater than 5 kWh/m2 and more than fixed mount flat panel when direct insolation was greater than 3 kWh/m2. The module energy conversion performance was demonstrated to be predictable using a parametric model developed by Sandia National Laboratory. Soiling accumulation on module entrance surface was surprisingly rapid in the local environment. Measured energy loss rate due to soiling were two to six times larger for CPV compared to flat panel losses.
Hybrid insolation forcing of Pliocene monsoon dynamics in West Africa
NASA Astrophysics Data System (ADS)
Kuechler, Rony R.; Dupont, Lydie M.; Schefuß, Enno
2018-01-01
The Pliocene is regarded as a potential analogue for future climate with conditions generally warmer-than-today and higher-than-preindustrial atmospheric CO2 levels. Here we present the first orbitally resolved records of continental hydrology and vegetation changes from West Africa for two Pliocene time intervals (5.0-4.6 Ma, 3.6-3.0 Ma), which we compare with records from the last glacial cycle (Kuechler et al., 2013). Our results indicate that changes in local insolation alone are insufficient to explain the full degree of hydrologic variations. Generally two modes of interacting insolation forcings are observed: during eccentricity maxima, when precession was strong, the West African monsoon was driven by summer insolation; during eccentricity minima, when precession-driven variations in local insolation were minimal, obliquity-driven changes in the summer latitudinal insolation gradient became dominant. This hybrid monsoonal forcing concept explains orbitally controlled tropical climate changes, incorporating the forcing mechanism of latitudinal gradients for the Pliocene, which probably increased in importance during subsequent Northern Hemisphere glaciations.
Associations of blood pressure, sunlight, and vitamin D in community-dwelling adults.
Rostand, Stephen G; McClure, Leslie A; Kent, Shia T; Judd, Suzanne E; Gutiérrez, Orlando M
2016-09-01
Vitamin D deficiency/insufficiency is associated with hypertension. Blood pressure (BP) and circulating vitamin D concentrations vary with the seasons and distance from the equator suggesting BP varies inversely with the sunshine available (insolation) for cutaneous vitamin D photosynthesis. To determine if the association between insolation and BP is partly explained by vitamin D, we evaluated 1104 participants in the Reasons for Racial and Geographic Differences in Stroke study whose BP and plasma 25-hydroxyvitamin D [25(OH)D] concentrations were measured. We found a significant inverse association between SBP and 25(OH)D concentration and an inverse association between insolation and BP in unadjusted analyses. After adjusting for other confounding variables, the association of solar insolation and BP was augmented, -0.3.5 ± SEM 0.01 mmHg/1 SD higher solar insolation, P = 0.01. The greatest of effects of insolation on SBP were observed in whites (-5.2 ± SEM 0.92 mmHg/1 SD higher solar insolation, P = 0.005) and in women (-3.8 ± SEM 1.7 mmHg, P = 0.024). We found that adjusting for 25(OH)D had no effect on the association of solar insolation with SBP. We conclude that although 25(OH)D concentration is inversely associated with SBP, it did not explain the association of greater sunlight exposure with lower BP.
Lin, Tung-Liang; Sheen, Huey-Min; Chung, Chin-Teng; Yang, Sai-Wei; Lin, Shih-Yi; Luo, Hong-Ji; Chen, Chung-Yu; Chan, I-Cheng; Shih, Hsu-Sheng; Sheu, Wayne Huey-Herng
2013-07-29
Removable plug insoles appear to be beneficial for patients with diabetic neuropathic feet to offload local plantar pressure. However, quantitative evidence of pressure reduction by means of plug removal is limited. The value of additional insole accessories, such as arch additions, has not been tested. The purpose of this study was to evaluate the effect of removing plugs from foam based insoles, and subsequently adding extra arch support, on plantar pressures. In-shoe plantar pressure measurements were performed on 26 patients with diabetic neuropathic feet at a baseline condition, in order to identify the forefoot region with the highest mean peak pressure (MPP). This was defined as the region of interest (ROI) for plug removal.The primary outcome was measurement of MPP using the pedar® system in the baseline and another three insole conditions (pre-plug removal, post-plug removal, and post-plug removal plus arch support). Among the 26 ROIs, a significant reduction in MPP (32.3%, P<0.001) was found after removing the insole plugs. With an arch support added, the pressure was further reduced (9.5%, P<0.001). There were no significant differences in MPP at non-ROIs between pre- and post-plug removal conditions. These findings suggest that forefoot plantar pressure can be reduced by removing plugs and adding arch support to foam-based insoles. This style of insole may therefore be clinically useful in managing patients with diabetic peripheral neuropathy.
Yi, Taeim; Kim, Jung Hyun; Oh-Park, Mooyeon; Hwang, Ji Hye
2018-03-01
We investigated the effects of full-length carbon fiber (FCF) insoles on gait, muscle activity, kinetics, and pain in patients with midfoot osteoarthritis (OA). We enrolled 13 patients with unilateral midfoot OA (mild: Visual Analog Scale [VAS] range, 1-3; moderate, VAS range, 4-7) and healthy controls. All participants were asked to walk under two conditions: with and without FCF insole. The outcome measures were ground reaction force, quantitative gait parameters, electromyography activities and pain severity (VAS). In the patients with moderate midfoot OA, significantly longer gait cycle and higher muscle activity of lower limb during loading-response phase were observed while walking without FCF insoles. In the mild midfoot OA group, there was no significant difference in VAS score (without, 2.0 ± 1.0 vs. with, 2.0 ± 0.5) with FCF insole use. However, significantly reduced VAS score (without, 5.5 ± 1.4 vs. with, 2.0 ± 0.5) and muscle activity of the tibialis anterior and increased muscle activity of gastrocnemius were observed in the moderate midfoot OA group by using an FCF insole (P < 0.05). Full-length carbon fiber insoles can improve pain in individuals with moderate midfoot OA, which might be associated with changes in the kinetics and muscle activities of the lower limb. Taken together, the results of the present study suggest that FCF insoles may be used as a helpful option for midfoot OA.
Ensemble Deep Learning for Biomedical Time Series Classification
2016-01-01
Ensemble learning has been proved to improve the generalization ability effectively in both theory and practice. In this paper, we briefly outline the current status of research on it first. Then, a new deep neural network-based ensemble method that integrates filtering views, local views, distorted views, explicit training, implicit training, subview prediction, and Simple Average is proposed for biomedical time series classification. Finally, we validate its effectiveness on the Chinese Cardiovascular Disease Database containing a large number of electrocardiogram recordings. The experimental results show that the proposed method has certain advantages compared to some well-known ensemble methods, such as Bagging and AdaBoost. PMID:27725828
On estimating attenuation from the amplitude of the spectrally whitened ambient seismic field
NASA Astrophysics Data System (ADS)
Weemstra, Cornelis; Westra, Willem; Snieder, Roel; Boschi, Lapo
2014-06-01
Measuring attenuation on the basis of interferometric, receiver-receiver surface waves is a non-trivial task: the amplitude, more than the phase, of ensemble-averaged cross-correlations is strongly affected by non-uniformities in the ambient wavefield. In addition, ambient noise data are typically pre-processed in ways that affect the amplitude itself. Some authors have recently attempted to measure attenuation in receiver-receiver cross-correlations obtained after the usual pre-processing of seismic ambient-noise records, including, most notably, spectral whitening. Spectral whitening replaces the cross-spectrum with a unit amplitude spectrum. It is generally assumed that cross-terms have cancelled each other prior to spectral whitening. Cross-terms are peaks in the cross-correlation due to simultaneously acting noise sources, that is, spurious traveltime delays due to constructive interference of signal coming from different sources. Cancellation of these cross-terms is a requirement for the successful retrieval of interferometric receiver-receiver signal and results from ensemble averaging. In practice, ensemble averaging is replaced by integrating over sufficiently long time or averaging over several cross-correlation windows. Contrary to the general assumption, we show in this study that cross-terms are not required to cancel each other prior to spectral whitening, but may also cancel each other after the whitening procedure. Specifically, we derive an analytic approximation for the amplitude difference associated with the reversed order of cancellation and normalization. Our approximation shows that an amplitude decrease results from the reversed order. This decrease is predominantly non-linear at small receiver-receiver distances: at distances smaller than approximately two wavelengths, whitening prior to ensemble averaging causes a significantly stronger decay of the cross-spectrum.
Li, Wenjin
2018-02-28
Transition path ensemble consists of reactive trajectories and possesses all the information necessary for the understanding of the mechanism and dynamics of important condensed phase processes. However, quantitative description of the properties of the transition path ensemble is far from being established. Here, with numerical calculations on a model system, the equipartition terms defined in thermal equilibrium were for the first time estimated in the transition path ensemble. It was not surprising to observe that the energy was not equally distributed among all the coordinates. However, the energies distributed on a pair of conjugated coordinates remained equal. Higher energies were observed to be distributed on several coordinates, which are highly coupled to the reaction coordinate, while the rest were almost equally distributed. In addition, the ensemble-averaged energy on each coordinate as a function of time was also quantified. These quantitative analyses on energy distributions provided new insights into the transition path ensemble.
Perception of ensemble statistics requires attention.
Jackson-Nielsen, Molly; Cohen, Michael A; Pitts, Michael A
2017-02-01
To overcome inherent limitations in perceptual bandwidth, many aspects of the visual world are represented as summary statistics (e.g., average size, orientation, or density of objects). Here, we investigated the relationship between summary (ensemble) statistics and visual attention. Recently, it was claimed that one ensemble statistic in particular, color diversity, can be perceived without focal attention. However, a broader debate exists over the attentional requirements of conscious perception, and it is possible that some form of attention is necessary for ensemble perception. To test this idea, we employed a modified inattentional blindness paradigm and found that multiple types of summary statistics (color and size) often go unnoticed without attention. In addition, we found attentional costs in dual-task situations, further implicating a role for attention in statistical perception. Overall, we conclude that while visual ensembles may be processed efficiently, some amount of attention is necessary for conscious perception of ensemble statistics. Copyright © 2016 Elsevier Inc. All rights reserved.
Genetic programming based ensemble system for microarray data classification.
Liu, Kun-Hong; Tong, Muchenxuan; Xie, Shu-Tong; Yee Ng, Vincent To
2015-01-01
Recently, more and more machine learning techniques have been applied to microarray data analysis. The aim of this study is to propose a genetic programming (GP) based new ensemble system (named GPES), which can be used to effectively classify different types of cancers. Decision trees are deployed as base classifiers in this ensemble framework with three operators: Min, Max, and Average. Each individual of the GP is an ensemble system, and they become more and more accurate in the evolutionary process. The feature selection technique and balanced subsampling technique are applied to increase the diversity in each ensemble system. The final ensemble committee is selected by a forward search algorithm, which is shown to be capable of fitting data automatically. The performance of GPES is evaluated using five binary class and six multiclass microarray datasets, and results show that the algorithm can achieve better results in most cases compared with some other ensemble systems. By using elaborate base classifiers or applying other sampling techniques, the performance of GPES may be further improved.
Genetic Programming Based Ensemble System for Microarray Data Classification
Liu, Kun-Hong; Tong, Muchenxuan; Xie, Shu-Tong; Yee Ng, Vincent To
2015-01-01
Recently, more and more machine learning techniques have been applied to microarray data analysis. The aim of this study is to propose a genetic programming (GP) based new ensemble system (named GPES), which can be used to effectively classify different types of cancers. Decision trees are deployed as base classifiers in this ensemble framework with three operators: Min, Max, and Average. Each individual of the GP is an ensemble system, and they become more and more accurate in the evolutionary process. The feature selection technique and balanced subsampling technique are applied to increase the diversity in each ensemble system. The final ensemble committee is selected by a forward search algorithm, which is shown to be capable of fitting data automatically. The performance of GPES is evaluated using five binary class and six multiclass microarray datasets, and results show that the algorithm can achieve better results in most cases compared with some other ensemble systems. By using elaborate base classifiers or applying other sampling techniques, the performance of GPES may be further improved. PMID:25810748
Fidelity decay of the two-level bosonic embedded ensembles of random matrices
NASA Astrophysics Data System (ADS)
Benet, Luis; Hernández-Quiroz, Saúl; Seligman, Thomas H.
2010-12-01
We study the fidelity decay of the k-body embedded ensembles of random matrices for bosons distributed over two single-particle states. Fidelity is defined in terms of a reference Hamiltonian, which is a purely diagonal matrix consisting of a fixed one-body term and includes the diagonal of the perturbing k-body embedded ensemble matrix, and the perturbed Hamiltonian which includes the residual off-diagonal elements of the k-body interaction. This choice mimics the typical mean-field basis used in many calculations. We study separately the cases k = 2 and 3. We compute the ensemble-averaged fidelity decay as well as the fidelity of typical members with respect to an initial random state. Average fidelity displays a revival at the Heisenberg time, t = tH = 1, and a freeze in the fidelity decay, during which periodic revivals of period tH are observed. We obtain the relevant scaling properties with respect to the number of bosons and the strength of the perturbation. For certain members of the ensemble, we find that the period of the revivals during the freeze of fidelity occurs at fractional times of tH. These fractional periodic revivals are related to the dominance of specific k-body terms in the perturbation.
DOE Office of Scientific and Technical Information (OSTI.GOV)
Olsen, Seth, E-mail: seth.olsen@uq.edu.au
2015-01-28
This paper reviews basic results from a theory of the a priori classical probabilities (weights) in state-averaged complete active space self-consistent field (SA-CASSCF) models. It addresses how the classical probabilities limit the invariance of the self-consistency condition to transformations of the complete active space configuration interaction (CAS-CI) problem. Such transformations are of interest for choosing representations of the SA-CASSCF solution that are diabatic with respect to some interaction. I achieve the known result that a SA-CASSCF can be self-consistently transformed only within degenerate subspaces of the CAS-CI ensemble density matrix. For uniformly distributed (“microcanonical”) SA-CASSCF ensembles, self-consistency is invariant tomore » any unitary CAS-CI transformation that acts locally on the ensemble support. Most SA-CASSCF applications in current literature are microcanonical. A problem with microcanonical SA-CASSCF models for problems with “more diabatic than adiabatic” states is described. The problem is that not all diabatic energies and couplings are self-consistently resolvable. A canonical-ensemble SA-CASSCF strategy is proposed to solve the problem. For canonical-ensemble SA-CASSCF, the equilibrated ensemble is a Boltzmann density matrix parametrized by its own CAS-CI Hamiltonian and a Lagrange multiplier acting as an inverse “temperature,” unrelated to the physical temperature. Like the convergence criterion for microcanonical-ensemble SA-CASSCF, the equilibration condition for canonical-ensemble SA-CASSCF is invariant to transformations that act locally on the ensemble CAS-CI density matrix. The advantage of a canonical-ensemble description is that more adiabatic states can be included in the support of the ensemble without running into convergence problems. The constraint on the dimensionality of the problem is relieved by the introduction of an energy constraint. The method is illustrated with a complete active space valence-bond (CASVB) analysis of the charge/bond resonance electronic structure of a monomethine cyanine: Michler’s hydrol blue. The diabatic CASVB representation is shown to vary weakly for “temperatures” corresponding to visible photon energies. Canonical-ensemble SA-CASSCF enables the resolution of energies and couplings for all covalent and ionic CASVB structures contributing to the SA-CASSCF ensemble. The CASVB solution describes resonance of charge- and bond-localized electronic structures interacting via bridge resonance superexchange. The resonance couplings can be separated into channels associated with either covalent charge delocalization or chemical bonding interactions, with the latter significantly stronger than the former.« less
Olsen, Seth
2015-01-28
This paper reviews basic results from a theory of the a priori classical probabilities (weights) in state-averaged complete active space self-consistent field (SA-CASSCF) models. It addresses how the classical probabilities limit the invariance of the self-consistency condition to transformations of the complete active space configuration interaction (CAS-CI) problem. Such transformations are of interest for choosing representations of the SA-CASSCF solution that are diabatic with respect to some interaction. I achieve the known result that a SA-CASSCF can be self-consistently transformed only within degenerate subspaces of the CAS-CI ensemble density matrix. For uniformly distributed ("microcanonical") SA-CASSCF ensembles, self-consistency is invariant to any unitary CAS-CI transformation that acts locally on the ensemble support. Most SA-CASSCF applications in current literature are microcanonical. A problem with microcanonical SA-CASSCF models for problems with "more diabatic than adiabatic" states is described. The problem is that not all diabatic energies and couplings are self-consistently resolvable. A canonical-ensemble SA-CASSCF strategy is proposed to solve the problem. For canonical-ensemble SA-CASSCF, the equilibrated ensemble is a Boltzmann density matrix parametrized by its own CAS-CI Hamiltonian and a Lagrange multiplier acting as an inverse "temperature," unrelated to the physical temperature. Like the convergence criterion for microcanonical-ensemble SA-CASSCF, the equilibration condition for canonical-ensemble SA-CASSCF is invariant to transformations that act locally on the ensemble CAS-CI density matrix. The advantage of a canonical-ensemble description is that more adiabatic states can be included in the support of the ensemble without running into convergence problems. The constraint on the dimensionality of the problem is relieved by the introduction of an energy constraint. The method is illustrated with a complete active space valence-bond (CASVB) analysis of the charge/bond resonance electronic structure of a monomethine cyanine: Michler's hydrol blue. The diabatic CASVB representation is shown to vary weakly for "temperatures" corresponding to visible photon energies. Canonical-ensemble SA-CASSCF enables the resolution of energies and couplings for all covalent and ionic CASVB structures contributing to the SA-CASSCF ensemble. The CASVB solution describes resonance of charge- and bond-localized electronic structures interacting via bridge resonance superexchange. The resonance couplings can be separated into channels associated with either covalent charge delocalization or chemical bonding interactions, with the latter significantly stronger than the former.
Decadal climate predictions improved by ocean ensemble dispersion filtering
NASA Astrophysics Data System (ADS)
Kadow, C.; Illing, S.; Kröner, I.; Ulbrich, U.; Cubasch, U.
2017-06-01
Decadal predictions by Earth system models aim to capture the state and phase of the climate several years in advance. Atmosphere-ocean interaction plays an important role for such climate forecasts. While short-term weather forecasts represent an initial value problem and long-term climate projections represent a boundary condition problem, the decadal climate prediction falls in-between these two time scales. In recent years, more precise initialization techniques of coupled Earth system models and increased ensemble sizes have improved decadal predictions. However, climate models in general start losing the initialized signal and its predictive skill from one forecast year to the next. Here we show that the climate prediction skill of an Earth system model can be improved by a shift of the ocean state toward the ensemble mean of its individual members at seasonal intervals. We found that this procedure, called ensemble dispersion filter, results in more accurate results than the standard decadal prediction. Global mean and regional temperature, precipitation, and winter cyclone predictions show an increased skill up to 5 years ahead. Furthermore, the novel technique outperforms predictions with larger ensembles and higher resolution. Our results demonstrate how decadal climate predictions benefit from ocean ensemble dispersion filtering toward the ensemble mean.
Real-time Ensemble Forecasting of Coronal Mass Ejections using the WSA-ENLIL+Cone Model
NASA Astrophysics Data System (ADS)
Mays, M. L.; Taktakishvili, A.; Pulkkinen, A. A.; MacNeice, P. J.; Rastaetter, L.; Kuznetsova, M. M.; Odstrcil, D.
2013-12-01
Ensemble forecasting of coronal mass ejections (CMEs) provides significant information in that it provides an estimation of the spread or uncertainty in CME arrival time predictions due to uncertainties in determining CME input parameters. Ensemble modeling of CME propagation in the heliosphere is performed by forecasters at the Space Weather Research Center (SWRC) using the WSA-ENLIL cone model available at the Community Coordinated Modeling Center (CCMC). SWRC is an in-house research-based operations team at the CCMC which provides interplanetary space weather forecasting for NASA's robotic missions and performs real-time model validation. A distribution of n (routinely n=48) CME input parameters are generated using the CCMC Stereo CME Analysis Tool (StereoCAT) which employs geometrical triangulation techniques. These input parameters are used to perform n different simulations yielding an ensemble of solar wind parameters at various locations of interest (satellites or planets), including a probability distribution of CME shock arrival times (for hits), and geomagnetic storm strength (for Earth-directed hits). Ensemble simulations have been performed experimentally in real-time at the CCMC since January 2013. We present the results of ensemble simulations for a total of 15 CME events, 10 of which were performed in real-time. The observed CME arrival was within the range of ensemble arrival time predictions for 5 out of the 12 ensemble runs containing hits. The average arrival time prediction was computed for each of the twelve ensembles predicting hits and using the actual arrival time an average absolute error of 8.20 hours was found for all twelve ensembles, which is comparable to current forecasting errors. Some considerations for the accuracy of ensemble CME arrival time predictions include the importance of the initial distribution of CME input parameters, particularly the mean and spread. When the observed arrivals are not within the predicted range, this still allows the ruling out of prediction errors caused by tested CME input parameters. Prediction errors can also arise from ambient model parameters such as the accuracy of the solar wind background, and other limitations. Additionally the ensemble modeling setup was used to complete a parametric event case study of the sensitivity of the CME arrival time prediction to free parameters for ambient solar wind model and CME.
Robustness of the far-field response of nonlocal plasmonic ensembles.
Tserkezis, Christos; Maack, Johan R; Liu, Zhaowei; Wubs, Martijn; Mortensen, N Asger
2016-06-22
Contrary to classical predictions, the optical response of few-nm plasmonic particles depends on particle size due to effects such as nonlocality and electron spill-out. Ensembles of such nanoparticles are therefore expected to exhibit a nonclassical inhomogeneous spectral broadening due to size distribution. For a normal distribution of free-electron nanoparticles, and within the simple nonlocal hydrodynamic Drude model, both the nonlocal blueshift and the plasmon linewidth are shown to be considerably affected by ensemble averaging. Size-variance effects tend however to conceal nonlocality to a lesser extent when the homogeneous size-dependent broadening of individual nanoparticles is taken into account, either through a local size-dependent damping model or through the Generalized Nonlocal Optical Response theory. The role of ensemble averaging is further explored in realistic distributions of isolated or weakly-interacting noble-metal nanoparticles, as encountered in experiments, while an analytical expression to evaluate the importance of inhomogeneous broadening through measurable quantities is developed. Our findings are independent of the specific nonclassical theory used, thus providing important insight into a large range of experiments on nanoscale and quantum plasmonics.
Chen, Wen-Ming; Lee, Sung-Jae; Lee, Peter Vee Sin
2015-02-26
Therapeutic footwear with specially-made insoles is often used in people with diabetes and rheumatoid arthritis to relieve ulcer risks and pain due to high pressures from areas beneath bony prominences of the foot, in particular to the metatarsal heads (MTHs). In a three-dimensional finite element study of the foot and footwear with sensitivity analysis, effects of geometrical variations of a therapeutic insole, in terms of insole thicknesses and metatarsal pad (MP) placements, on local peak plantar pressure under MTHs and stress/strain states within various forefoot tissues, were determined. A validated musculoskeletal finite element model of the human foot was employed. Analyses were performed in a simulated muscle-demanding instant in gait. For many design combinations, increasing insole thicknesses consistently reduce peak pressures and internal tissue strain under MTHs, but the effects reach a plateau when insole becomes very thick (e.g., a value of 12.7mm or greater). Altering MP placements, however, showed a proximally- and a distally-placed MP could result in reverse effects on MTH pressure-relief. The unsuccessful outcome due to a distally-placed MP may attribute to the way it interacts with plantar tissue (e.g., plantar fascia) adjacent to the MTH. A uniform pattern of tissue compression under metatarsal shaft is necessary for a most favorable pressure-relief under MTHs. The designated functions of an insole design can best be achieved when the insole is very thick, and when the MP can achieve a uniform tissue compression pattern adjacent to the MTH. Copyright © 2015 Elsevier Ltd. All rights reserved.
Football boot insoles and sensitivity to extent of ankle inversion movement.
Waddington, G; Adams, R
2003-04-01
The capacity of the plantar sole of the foot to convey information about foot position is reduced by conventional smooth boot insoles, compared with barefoot surface contact. To test the hypothesis that movement discrimination may be restored by inserting textured replacement insoles, achieved by changing footwear conditions and measuring the accuracy of judgments of the extent of ankle inversion movement. An automated testing device, the ankle movement extent discrimination apparatus (AMEDA), developed to assess active ankle function in weight bearing without a balance demand, was used to test the effects of sole inserts in soccer boots. Seventeen elite soccer players, the members of the 2000 Australian Women's soccer squad (34 ankles), took part in the study. Subjects were randomly allocated to start testing in: bare feet, their own football boots, own football boot and replacement insole, and on the left or right side. Subjects underwent six 50 trial blocks, in which they completed all footwear conditions. The sole inserts were cut to size for each foot from textured rubber "finger profile" sheeting. Movement discrimination scores were significantly worse when subjects wore their football boots and socks, compared with barefoot data collected at the same time. The substitution of textured insoles for conventional smooth insoles in the football boots was found to restore movement discrimination to barefoot levels. The lower active movement discrimination scores of athletes when wearing football boots with smooth insoles suggest that the insole is one aspect of football boot and sport shoe design that could be modified to provide the sensory feedback needed for accurate foot positioning.
A model ensemble for projecting multi‐decadal coastal cliff retreat during the 21st century
Limber, Patrick; Barnard, Patrick; Vitousek, Sean; Erikson, Li
2018-01-01
Sea cliff retreat rates are expected to accelerate with rising sea levels during the 21st century. Here we develop an approach for a multi‐model ensemble that efficiently projects time‐averaged sea cliff retreat over multi‐decadal time scales and large (>50 km) spatial scales. The ensemble consists of five simple 1‐D models adapted from the literature that relate sea cliff retreat to wave impacts, sea level rise (SLR), historical cliff behavior, and cross‐shore profile geometry. Ensemble predictions are based on Monte Carlo simulations of each individual model, which account for the uncertainty of model parameters. The consensus of the individual models also weights uncertainty, such that uncertainty is greater when predictions from different models do not agree. A calibrated, but unvalidated, ensemble was applied to the 475 km‐long coastline of Southern California (USA), with 4 SLR scenarios of 0.5, 0.93, 1.5, and 2 m by 2100. Results suggest that future retreat rates could increase relative to mean historical rates by more than two‐fold for the higher SLR scenarios, causing an average total land loss of 19 – 41 m by 2100. However, model uncertainty ranges from +/‐ 5 – 15 m, reflecting the inherent difficulties of projecting cliff retreat over multiple decades. To enhance ensemble performance, future work could include weighting each model by its skill in matching observations in different morphological settings
An ensemble forecast of the South China Sea monsoon
NASA Astrophysics Data System (ADS)
Krishnamurti, T. N.; Tewari, Mukul; Bensman, Ed; Han, Wei; Zhang, Zhan; Lau, William K. M.
1999-05-01
This paper presents a generalized ensemble forecast procedure for the tropical latitudes. Here we propose an empirical orthogonal function-based procedure for the definition of a seven-member ensemble. The wind and the temperature fields are perturbed over the global tropics. Although the forecasts are made over the global belt with a high-resolution model, the emphasis of this study is on a South China Sea monsoon. Over this domain of the South China Sea includes the passage of a Tropical Storm, Gary, that moved eastwards north of the Philippines. The ensemble forecast handled the precipitation of this storm reasonably well. A global model at the resolution Triangular Truncation 126 waves is used to carry out these seven forecasts. The evaluation of the ensemble of forecasts is carried out via standard root mean square errors of the precipitation and the wind fields. The ensemble average is shown to have a higher skill compared to a control experiment, which was a first analysis based on operational data sets over both the global tropical and South China Sea domain. All of these experiments were subjected to physical initialization which provides a spin-up of the model rain close to that obtained from satellite and gauge-based estimates. The results furthermore show that inherently much higher skill resides in the forecast precipitation fields if they are averaged over area elements of the order of 4° latitude by 4° longitude squares.
NASA Astrophysics Data System (ADS)
Exbrayat, Jean-François; Bloom, A. Anthony; Falloon, Pete; Ito, Akihiko; Smallman, T. Luke; Williams, Mathew
2018-02-01
Multi-model averaging techniques provide opportunities to extract additional information from large ensembles of simulations. In particular, present-day model skill can be used to evaluate their potential performance in future climate simulations. Multi-model averaging methods have been used extensively in climate and hydrological sciences, but they have not been used to constrain projected plant productivity responses to climate change, which is a major uncertainty in Earth system modelling. Here, we use three global observationally orientated estimates of current net primary productivity (NPP) to perform a reliability ensemble averaging (REA) method using 30 global simulations of the 21st century change in NPP based on the Inter-Sectoral Impact Model Intercomparison Project (ISIMIP) business as usual
emissions scenario. We find that the three REA methods support an increase in global NPP by the end of the 21st century (2095-2099) compared to 2001-2005, which is 2-3 % stronger than the ensemble ISIMIP mean value of 24.2 Pg C y-1. Using REA also leads to a 45-68 % reduction in the global uncertainty of 21st century NPP projection, which strengthens confidence in the resilience of the CO2 fertilization effect to climate change. This reduction in uncertainty is especially clear for boreal ecosystems although it may be an artefact due to the lack of representation of nutrient limitations on NPP in most models. Conversely, the large uncertainty that remains on the sign of the response of NPP in semi-arid regions points to the need for better observations and model development in these regions.
Correlation of LEND and Diviner Data
NASA Technical Reports Server (NTRS)
McClanahan, Tim; Boynton, William; Mitrofanov, Igor; Sagdeev, Raold; Bennet, Kristen; Starr, Richard; Evans, Larry; Paige, Dave; Sanin, Anton; Litvak, Max;
2011-01-01
Correlated results from the Lunar Reconnaissance Orbiter's (LRO) Lunar Exploration Neutron Detector (LEND) and Lunar Orbiting Laser Altimeter (LOLA) suggest insolation effects influence the spatial distribution of Lunar H poleward of 60deg latitude. Diviner results indicate an insolation induced thermal contrast between pole-facing and equator-facing slopes of crater walls. Our research shows that the contrasting thermal conditions observed in pole-facing vs equator-facing slopes and epithermal neutron rates from LEND are positively correlated. Numerical transformations of LOLA topography facilitated a systematic decomposition of LEND epithermal maps as a function of insolation effects. The results suggest a significantly positive local epithermal contrast in these regions. Comparing pole-facing and equator-facing slopes, we find that the pole-facing slopes show epithermal neutron suppression ranging from -0.005 to 0.02 cps relative to the equator-facing slopes .. We further investigate insolation effects on epithermal neutrons by comparing the predicted insolation contrast derived from the 3-D LOLA topography model with the LEND results. We also investigate and discuss the possibility of slope mass wasting effects being correlated with our insolation-effect hypothesis
The total probabilities from high-resolution ensemble forecasting of floods
NASA Astrophysics Data System (ADS)
Olav Skøien, Jon; Bogner, Konrad; Salamon, Peter; Smith, Paul; Pappenberger, Florian
2015-04-01
Ensemble forecasting has for a long time been used in meteorological modelling, to give an indication of the uncertainty of the forecasts. As meteorological ensemble forecasts often show some bias and dispersion errors, there is a need for calibration and post-processing of the ensembles. Typical methods for this are Bayesian Model Averaging (Raftery et al., 2005) and Ensemble Model Output Statistics (EMOS) (Gneiting et al., 2005). There are also methods for regionalizing these methods (Berrocal et al., 2007) and for incorporating the correlation between lead times (Hemri et al., 2013). To make optimal predictions of floods along the stream network in hydrology, we can easily use the ensemble members as input to the hydrological models. However, some of the post-processing methods will need modifications when regionalizing the forecasts outside the calibration locations, as done by Hemri et al. (2013). We present a method for spatial regionalization of the post-processed forecasts based on EMOS and top-kriging (Skøien et al., 2006). We will also look into different methods for handling the non-normality of runoff and the effect on forecasts skills in general and for floods in particular. Berrocal, V. J., Raftery, A. E. and Gneiting, T.: Combining Spatial Statistical and Ensemble Information in Probabilistic Weather Forecasts, Mon. Weather Rev., 135(4), 1386-1402, doi:10.1175/MWR3341.1, 2007. Gneiting, T., Raftery, A. E., Westveld, A. H. and Goldman, T.: Calibrated Probabilistic Forecasting Using Ensemble Model Output Statistics and Minimum CRPS Estimation, Mon. Weather Rev., 133(5), 1098-1118, doi:10.1175/MWR2904.1, 2005. Hemri, S., Fundel, F. and Zappa, M.: Simultaneous calibration of ensemble river flow predictions over an entire range of lead times, Water Resour. Res., 49(10), 6744-6755, doi:10.1002/wrcr.20542, 2013. Raftery, A. E., Gneiting, T., Balabdaoui, F. and Polakowski, M.: Using Bayesian Model Averaging to Calibrate Forecast Ensembles, Mon. Weather Rev., 133(5), 1155-1174, doi:10.1175/MWR2906.1, 2005. Skøien, J. O., Merz, R. and Blöschl, G.: Top-kriging - Geostatistics on stream networks, Hydrol. Earth Syst. Sci., 10(2), 277-287, 2006.
Wu, Xiongwu; Damjanovic, Ana; Brooks, Bernard R.
2013-01-01
This review provides a comprehensive description of the self-guided Langevin dynamics (SGLD) and the self-guided molecular dynamics (SGMD) methods and their applications. Example systems are included to provide guidance on optimal application of these methods in simulation studies. SGMD/SGLD has enhanced ability to overcome energy barriers and accelerate rare events to affordable time scales. It has been demonstrated that with moderate parameters, SGLD can routinely cross energy barriers of 20 kT at a rate that molecular dynamics (MD) or Langevin dynamics (LD) crosses 10 kT barriers. The core of these methods is the use of local averages of forces and momenta in a direct manner that can preserve the canonical ensemble. The use of such local averages results in methods where low frequency motion “borrows” energy from high frequency degrees of freedom when a barrier is approached and then returns that excess energy after a barrier is crossed. This self-guiding effect also results in an accelerated diffusion to enhance conformational sampling efficiency. The resulting ensemble with SGLD deviates in a small way from the canonical ensemble, and that deviation can be corrected with either an on-the-fly or a post processing reweighting procedure that provides an excellent canonical ensemble for systems with a limited number of accelerated degrees of freedom. Since reweighting procedures are generally not size extensive, a newer method, SGLDfp, uses local averages of both momenta and forces to preserve the ensemble without reweighting. The SGLDfp approach is size extensive and can be used to accelerate low frequency motion in large systems, or in systems with explicit solvent where solvent diffusion is also to be enhanced. Since these methods are direct and straightforward, they can be used in conjunction with many other sampling methods or free energy methods by simply replacing the integration of degrees of freedom that are normally sampled by MD or LD. PMID:23913991
DOE Office of Scientific and Technical Information (OSTI.GOV)
Petkov, Valeri; Prasai, Binay; Shastri, Sarvjit
Practical applications require the production and usage of metallic nanocrystals (NCs) in large ensembles. Besides, due to their cluster-bulk solid duality, metallic NCs exhibit a large degree of structural diversity. This poses the question as to what atomic-scale basis is to be used when the structure–function relationship for metallic NCs is to be quantified precisely. In this paper, we address the question by studying bi-functional Fe core-Pt skin type NCs optimized for practical applications. In particular, the cluster-like Fe core and skin-like Pt surface of the NCs exhibit superparamagnetic properties and a superb catalytic activity for the oxygen reduction reaction,more » respectively. We determine the atomic-scale structure of the NCs by non-traditional resonant high-energy X-ray diffraction coupled to atomic pair distribution function analysis. Using the experimental structure data we explain the observed magnetic and catalytic behavior of the NCs in a quantitative manner. Lastly, we demonstrate that NC ensemble-averaged 3D positions of atoms obtained by advanced X-ray scattering techniques are a very proper basis for not only establishing but also quantifying the structure–function relationship for the increasingly complex metallic NCs explored for practical applications.« less
Tang, Simon Fuk-Tan; Chen, Carl P C; Lin, Shih-Cherng; Wu, Chih-Kuan; Chen, Chih-Kuang; Cheng, Shun-Ping
2015-02-01
The purpose of this study was to observe whether our custom made shoes and total contact insoles can effectively increase the plantar contact areas and reduce peak pressures in patients with leprosy. In the rehabilitation laboratory of a tertiary medical center. Six male and two female leprosy patients were recruited in this study. In this study, parameters related to foot pressures were compared between these patients wearing commercial available soft-lining kung-fu shoes and our custom made shoes with total contact insoles. The custom made shoes were made with larger toe box and were able to accommodate both the foot and the insoles. Custom made total contact insoles were made with the subtalar joints under neutral and non-weight-bearing positions. The insole force measurement system of Novel Pedar-X (Novel, Munich, Germany) was used to measure the plantar forces. The parameters of contact area (cm(2)), peak plantar pressures (kPa), contact time (s), and pressure time integral (kPa s) were measured. There were significant contact area increases in the right and left foot heel areas, left medial arch, and second to fifth toes after wearing the custom made shoes and insoles. There were significant decreases in peak plantar pressures in bilateral heels, left lateral midfoot, bilateral second to fourth metatarsal areas, and left fifth metatarsal head after wearing the custom made shoes and insoles (p<0.05). Plantar ulceration is a common serious disability in leprosy patients. As a result, footwear and measures able to reduce plantar pressures may be beneficial in preventing plantar ulcers from occurring in these patients. Our custom made shoes and total contact insoles were proven to be effective in increasing contact areas and decreasing peak pressures in plantar surfaces, and may therefore be a feasible treatment option in preventing leprosy patients from developing plantar ulcers. © 2015 Elsevier B.V. All rights reserved.
NASA Astrophysics Data System (ADS)
Matsunaga, Y.; Sugita, Y.
2018-06-01
A data-driven modeling scheme is proposed for conformational dynamics of biomolecules based on molecular dynamics (MD) simulations and experimental measurements. In this scheme, an initial Markov State Model (MSM) is constructed from MD simulation trajectories, and then, the MSM parameters are refined using experimental measurements through machine learning techniques. The second step can reduce the bias of MD simulation results due to inaccurate force-field parameters. Either time-series trajectories or ensemble-averaged data are available as a training data set in the scheme. Using a coarse-grained model of a dye-labeled polyproline-20, we compare the performance of machine learning estimations from the two types of training data sets. Machine learning from time-series data could provide the equilibrium populations of conformational states as well as their transition probabilities. It estimates hidden conformational states in more robust ways compared to that from ensemble-averaged data although there are limitations in estimating the transition probabilities between minor states. We discuss how to use the machine learning scheme for various experimental measurements including single-molecule time-series trajectories.
NASA Astrophysics Data System (ADS)
Berger, M.; Brandefelt, J.; Nilsson, J.
2013-04-01
In the present work the Arctic sea ice in the mid-Holocene and the pre-industrial climates are analysed and compared on the basis of climate-model results from the Paleoclimate Modelling Intercomparison Project phase 2 (PMIP2) and phase 3 (PMIP3). The PMIP3 models generally simulate smaller and thinner sea-ice extents than the PMIP2 models both for the pre-industrial and the mid-Holocene climate. Further, the PMIP2 and PMIP3 models all simulate a smaller and thinner Arctic summer sea-ice cover in the mid-Holocene than in the pre-industrial control climate. The PMIP3 models also simulate thinner winter sea ice than the PMIP2 models. The winter sea-ice extent response, i.e. the difference between the mid-Holocene and the pre-industrial climate, varies among both PMIP2 and PMIP3 models. Approximately one half of the models simulate a decrease in winter sea-ice extent and one half simulates an increase. The model-mean summer sea-ice extent is 11 % (21 %) smaller in the mid-Holocene than in the pre-industrial climate simulations in the PMIP2 (PMIP3). In accordance with the simple model of Thorndike (1992), the sea-ice thickness response to the insolation change from the pre-industrial to the mid-Holocene is stronger in models with thicker ice in the pre-industrial climate simulation. Further, the analyses show that climate models for which the Arctic sea-ice responses to increasing atmospheric CO2 concentrations are similar may simulate rather different sea-ice responses to the change in solar forcing between the mid-Holocene and the pre-industrial. For two specific models, which are analysed in detail, this difference is found to be associated with differences in the simulated cloud fractions in the summer Arctic; in the model with a larger cloud fraction the effect of insolation change is muted. A sub-set of the mid-Holocene simulations in the PMIP ensemble exhibit open water off the north-eastern coast of Greenland in summer, which can provide a fetch for surface waves. This is in broad agreement with recent analyses of sea-ice proxies, indicating that beach-ridges formed on the north-eastern coast of Greenland during the early- to mid-Holocene.
Summary statistics in the attentional blink.
McNair, Nicolas A; Goodbourn, Patrick T; Shone, Lauren T; Harris, Irina M
2017-01-01
We used the attentional blink (AB) paradigm to investigate the processing stage at which extraction of summary statistics from visual stimuli ("ensemble coding") occurs. Experiment 1 examined whether ensemble coding requires attentional engagement with the items in the ensemble. Participants performed two sequential tasks on each trial: gender discrimination of a single face (T1) and estimating the average emotional expression of an ensemble of four faces (or of a single face, as a control condition) as T2. Ensemble coding was affected by the AB when the tasks were separated by a short temporal lag. In Experiment 2, the order of the tasks was reversed to test whether ensemble coding requires more working-memory resources, and therefore induces a larger AB, than estimating the expression of a single face. Each condition produced a similar magnitude AB in the subsequent gender-discrimination T2 task. Experiment 3 additionally investigated whether the previous results were due to participants adopting a subsampling strategy during the ensemble-coding task. Contrary to this explanation, we found different patterns of performance in the ensemble-coding condition and a condition in which participants were instructed to focus on only a single face within an ensemble. Taken together, these findings suggest that ensemble coding emerges automatically as a result of the deployment of attentional resources across the ensemble of stimuli, prior to information being consolidated in working memory.
Parametric study of orthopedic insole of valgus foot on partial foot amputation.
Guo, Jun-Chao; Wang, Li-Zhen; Chen, Wei; Du, Cheng-Fei; Mo, Zhong-Jun; Fan, Yu-Bo
2016-01-01
Orthopedic insole was important for partial foot amputation (PFA) to achieve foot balance and avoid foot deformity. The inapposite insole orthosis was thought to be one of the risk factors of reamputation for foot valgus patient, but biomechanical effects of internal tissues on valgus foot had not been clearly addressed. In this study, plantar pressure on heel and metatarsal regions of PFA was measured using F-Scan. The three-dimensional finite element (FE) model of partial foot evaluated different medial wedge angles (MWAs) (0.0°-10.0°) of orthopedic insole on valgus foot. The effect of orthopedic insole on the internal bone stress, the medial ligament tension of ankle, plantar fascia tension, and plantar pressure was investigated. Plantar pressure on medial heel region was about 2.5 times higher than that of lateral region based on the F-Scan measurements. FE-predicted results showed that the tension of medial ankle ligaments was the lowest, and the plantar pressure was redistributed around the heel, the first metatarsal, and the lateral longitudinal arch regions when MWA of orthopedic insole ranged from 7.5° to 8.0°. The plantar fascias maintained about 3.5% of the total load bearing on foot. However, the internal stresses from foot bones increased. The simulation in this study would provide the suggestion of guiding optimal design of orthopedic insole and therapeutic planning to pedorthist.
DOE Office of Scientific and Technical Information (OSTI.GOV)
Kawano, Toshihiko
2015-11-10
This theoretical treatment of low-energy compound nucleus reactions begins with the Bohr hypothesis, with corrections, and various statistical theories. The author investigates the statistical properties of the scattering matrix containing a Gaussian Orthogonal Ensemble (GOE) Hamiltonian in the propagator. The following conclusions are reached: For all parameter values studied, the numerical average of MC-generated cross sections coincides with the result of the Verbaarschot, Weidenmueller, Zirnbauer triple-integral formula. Energy average and ensemble average agree reasonably well when the width I is one or two orders of magnitude larger than the average resonance spacing d. In the strong-absorption limit, the channel degree-of-freedommore » ν a is 2. The direct reaction increases the inelastic cross sections while the elastic cross section is reduced.« less
A Simple Modeling Tool and Exercises for Incoming Solar Radiation Demonstrations
ERIC Educational Resources Information Center
Werts, Scott; Hinnov, Linda
2011-01-01
We present a MATLAB script INSOLATE.m that calculates insolation at the top of the atmosphere and the total amount of daylight during the year (and other quantities) with respect to geographic latitude and Earth's obliquity (axial tilt). The script output displays insolation values for an entire year on a three-dimensional graph. This tool…
Xue, Yi; Skrynnikov, Nikolai R
2014-01-01
Currently, the best existing molecular dynamics (MD) force fields cannot accurately reproduce the global free-energy minimum which realizes the experimental protein structure. As a result, long MD trajectories tend to drift away from the starting coordinates (e.g., crystallographic structures). To address this problem, we have devised a new simulation strategy aimed at protein crystals. An MD simulation of protein crystal is essentially an ensemble simulation involving multiple protein molecules in a crystal unit cell (or a block of unit cells). To ensure that average protein coordinates remain correct during the simulation, we introduced crystallography-based restraints into the MD protocol. Because these restraints are aimed at the ensemble-average structure, they have only minimal impact on conformational dynamics of the individual protein molecules. So long as the average structure remains reasonable, the proteins move in a native-like fashion as dictated by the original force field. To validate this approach, we have used the data from solid-state NMR spectroscopy, which is the orthogonal experimental technique uniquely sensitive to protein local dynamics. The new method has been tested on the well-established model protein, ubiquitin. The ensemble-restrained MD simulations produced lower crystallographic R factors than conventional simulations; they also led to more accurate predictions for crystallographic temperature factors, solid-state chemical shifts, and backbone order parameters. The predictions for 15N R1 relaxation rates are at least as accurate as those obtained from conventional simulations. Taken together, these results suggest that the presented trajectories may be among the most realistic protein MD simulations ever reported. In this context, the ensemble restraints based on high-resolution crystallographic data can be viewed as protein-specific empirical corrections to the standard force fields. PMID:24452989
Effects of long-term stimulation of textured insoles on postural control in health elderly.
Annino, Giuseppe; Palazzo, Francesco; Alwardat, Mohammad S; Manzi, Vincenzo; Lebone, Pietro; Tancredi, Virginia; Sinibaldi Salimei, Paola; Caronti, Alfio; Panzarino, Michele; Padua, Elvira
2018-04-01
The aim of this study was to confirm the effects of long term (chronic) stimulating surface (textured insole) on body balance of elderly people. Twenty-four healthy elderly individuals were randomly distributed in two groups: control and experimental (67.75±6.04 years, 74.55±12.14 kg, 163.7±8.55 cm, 27.75±3.04 kg/m2). Over one month, control group (CG) used smooth insoles and the experimental group (ExG) used textured insoles every day. Velocity net (Vnet), anteroposterior (VA/P), mediolateral (VM/L) and sway path of CoP were assessed in different eye conditions before and after the experimental procedure. A mixed between-within subject ANOVA was conducted to assess the impact of soft and textured insoles and two visual conditions (vision vs. no vision) across two time periods (α≤0.05). The results showed any statistical difference between groups in each parameter assessed in this study. CoP, Vnet and VM/L in the experimental group showed a statistically significant effect of textured insoles only without vision (CoP: P=0.002; η2=0.35), Vnet P=0.02; η2=0.24, VM/L P=0.04; η2=0.177) whereas VA/P showed no statistically significant effect in the same group and condition. There was no significant effect in Vnet, VA/P, VM/L and COP in control group that used smooth insole for both eye conditions. The results confirm that postural stability improved in healthy elderly individuals, increasing somatosensory information's from feet plantar mechanoreceptors. Long term stimulation with textured insoles decreased CoP, Vnet and VM/L with eyes closed.
Arastoo, Ali Asghar; Aghdam, Esmaeil Moharrami; Habibi, Abdoul Hamid; Zahednejad, Shahla
2014-06-01
According to literature, little is known regarding the effects of orthotic management of flatfoot on kinetics of vertical jump. To compare the kinetic and temporal events of two-legged vertical jumping take-off from a force plate for heading a ball in normal and flexible flatfoot subjects with and without insole. A functional based interventional controlled study. Random sampling method was employed to draw a control group of 15 normal foot subjects to a group of 15 flatfoot subjects. A force platform was used to record kinetics of two-legged vertical jump shots. Results indicate that insole did not lead to a significant effect on kinetics regarding anterior-posterior and mediolateral directions (p > 0.05). Results of kinetics related to vertical direction for maximum force due to take-off and stance duration revealed significant differences between the normal and flexible flatfoot subjects without insole (p < 0.05) and no significant differences between the normal foot and flexible flatfoot subjects with insole adoption (p > 0.05). These results suggest that the use of an insole in the flexible flatfoot subjects led to improved stance time and decrease of magnitude of kinetics regarding vertical direction at take-off as the main feature of two-legged vertical jumping function. Adoption of the insole improved the design of the shoe-foot interface support for the flexible flatfoot athletes, enabling them to develop more effective take-off kinetics for vertical jumping in terms of ground reaction force and stance duration similar to that of normal foot subjects without insole. © The International Society for Prosthetics and Orthotics 2013.
Long-time Dynamics of Stochastic Wave Breaking
NASA Astrophysics Data System (ADS)
Restrepo, J. M.; Ramirez, J. M.; Deike, L.; Melville, K.
2017-12-01
A stochastic parametrization is proposed for the dynamics of wave breaking of progressive water waves. The model is shown to agree with transport estimates, derived from the Lagrangian path of fluid parcels. These trajectories are obtained numerically and are shown to agree well with theory in the non-breaking regime. Of special interest is the impact of wave breaking on transport, momentum exchanges and energy dissipation, as well as dispersion of trajectories. The proposed model, ensemble averaged to larger time scales, is compared to ensemble averages of the numerically generated parcel dynamics, and is then used to capture energy dissipation and path dispersion.
Special Pyrheliometer Shroud Development
NASA Technical Reports Server (NTRS)
Dennison, E. W.
1984-01-01
To insure that the insolation values accurately represent the input power to a power conversion unit the field of view (FOV) of the concentrator aperture and the insolation radiometer must be the same. The calculations, implementation, and results of this approach are covered. Three instruments were used to measure the insolation: an Eppley Normal Incidence Radiometer (NIP) and two versions of the kendall cavity radiometer. The shrouds used to limit the FOV of the radiometers were designed to simulate the FOV of the PDC-1 concentrater with the cold water cavity calorimeter. This technique of matching the FOV of an insolation radiometer to the FOV of a specific concentrater and receiver aperture appears to be both practical and effective. The efficiency of a power conversion unit will be too low if the insolation is measured with a radiometer which has a FOV which is larger than the FOV of the concentrator.
Analysis of walking improvement with dynamic shoe insoles, using two accelerometers
NASA Astrophysics Data System (ADS)
Tsuruoka, Yuriko; Tamura, Yoshiyasu; Shibasaki, Ryosuke; Tsuruoka, Masako
2005-07-01
The orthopedics at the rehabilitation hospital found that disorders caused by sports injuries to the feet or caused by lower-back are improved by wearing dynamic shoe insoles, these improve walking balance and stability. However, the relationship of the lower-back and knees and the rate of increase in stability were not quantitatively analyzed. In this study, using two accelerometers, we quantitatively analyzed the reciprocal spatiotemporal contributions between the lower-back and knee of patients with left lower-back pain by means of Relative Power Contribution Analysis. When the insoles were worn, the contribution of the left and right knee relative to the left lower-back pain was up to 26% ( p<0.05) greater than without the insoles. Comparing patients with and without insoles, we found that the variance in the step response analysis of the left and right knee decreased by up to 67% ( p<0.05). This shows an increase in stability.
NASA Astrophysics Data System (ADS)
Lahmiri, Salim; Boukadoum, Mounir
2015-08-01
We present a new ensemble system for stock market returns prediction where continuous wavelet transform (CWT) is used to analyze return series and backpropagation neural networks (BPNNs) for processing CWT-based coefficients, determining the optimal ensemble weights, and providing final forecasts. Particle swarm optimization (PSO) is used for finding optimal weights and biases for each BPNN. To capture symmetry/asymmetry in the underlying data, three wavelet functions with different shapes are adopted. The proposed ensemble system was tested on three Asian stock markets: The Hang Seng, KOSPI, and Taiwan stock market data. Three statistical metrics were used to evaluate the forecasting accuracy; including, mean of absolute errors (MAE), root mean of squared errors (RMSE), and mean of absolute deviations (MADs). Experimental results showed that our proposed ensemble system outperformed the individual CWT-ANN models each with different wavelet function. In addition, the proposed ensemble system outperformed the conventional autoregressive moving average process. As a result, the proposed ensemble system is suitable to capture symmetry/asymmetry in financial data fluctuations for better prediction accuracy.
Precise time-window for the onset of glacial termination found
NASA Astrophysics Data System (ADS)
Lai, C.-C.; Tseng, Y.-H.; Dietrich, D. E.
2009-04-01
Following a set of three simple rules, we have found a precise time-window (TW) for each onset of a glacial termination (GT) appeared during the last million years. The onset of GT (OGT) is defined as the year when the following two conditions are met: (1) the benthic delta 18-O is a maximum and greater than 4.5‰ and (2) its value continually drops 1‰ within 5 Ky. We developed the rules based on three hypotheses. We hypothesize that: (H1) The Earth's three orbital parameters (eccentricity, obliquity and precession of equinox) determine the insolation which is the key force to the climate system. (H2) However, only a small fraction of insolation is converted into sensible heat (SH) and chemical energy through photosynthesis (CETP) as influxes to the climate system's main heat capacitors (HCs), namely the world oceans. When insolation increases, both the SH flux and CETP increase. The downward SH flux will only increase the stability of the seawater. Nonetheless, the CETP gets accumulated faster than average. The CETP cascades through the marine food web and bacterial degradation. Finally, it is stored in the simple gas molecules (such as CH4) that form methane hydrate (MH) and other hydrates such as hydrogen sulfide hydrate (HSH) in deep sea sediments after a long time. While hydrates deposit accumulates with time, it also breaks off from the sediments from time to time. Since the density of MH is slightly smaller than average seawater, the MH ascends slowly from deep sea into upper part of ocean. But, HSH is slightly denser than the warm seawater in the upper part of ocean. Over the portion of glacial cycle when insolation is strong, the existence of a residual SH prevents the ascension of hydrates. (H3) Internal forcing - An internal energy converter or a heat generator exists in the oceans. Lai (2007) has found the link between the observed seawater warming at intermediate depth (400 - 750 m) (Barnett et al. 2001) and the dissociation of floating microscopic MH and subsequent methane oxidation via bacteria. We postulate that the cooling of deep seawater when the insolation is weak leads to more hydrates ascending through seawater to the level for dissociation (which is a process depending on seawater temperature and pressure). The oxidation of CH4 and H2S after hydrate-dissociation is a multi-step process/phenomenon that we refer to as ocean slow-burn (OSB). It generates the maximum heat per mole of atom-C among all carbon-containing compounds, including sugars. Through oxidation, the CETP is now released as heat that is transferred via biomass, eventually being deposited into the seawater. Since the heat generated in the OSB is greater than that required to dissociate hydrates, they become self-sustained and run-away as long as all players (MH, bacteria, and methane ice worms (Fisher et al. 2000)) are present. So, the glacial termination is a process to release the stored CETP instead of trapping more insolation energy. (H4) Having accumulated enough energy sources, the OGT will happen when the joint effect of the three parameters triggers the discharge of the HCs. The trigger is an abrupt reduction in insolation over the Southern Oceans, especially South Atlantic under which lies the active Mid-Atlantic Ridge. The three rules were found through following steps: (1) finding a wide time-window (WTW) within which the energy (stored in hydrates) required to sustain a GT can be accumulated. (2) Then, we find a narrow time-window (NTW) (within that WTW) when the HC is abruptly cooled down due to a quick reduction in insolation. That NTW shall be the ideal time for the OGT. The variation of eccentricity is the factor controlling the annual global integral of insolation (AGII). The bigger the eccentricity the greater the AGII is. The greater the AGII the more the global CETP capture is. Presume that eccentricity varies like a sinusoidal function of time with a single period of 95 Ky. Then, the CETP being stored into the HCs varies in the same cycle, too. On the other hand, the hydrates are being consumed by OSB process at a rate, (namely r(OSB)), that is not directly controlled by the eccentricity. Assume that during the glacial period r(OSB) is significant but smaller than the accumulation rate of CETP (namely, r(CETP)). This leads us to think that during the phase -90o to 90o (valley to peak) half cycle is a better WTW to accumulate hydrates than the 90o to 270o (peak to valley) half cycle. This is Rule 1. The NTW is regulated by Rules 2 and 3. Rule 2 is that the obliquity must be increasing. Rule 3 is that precession must be near 180o phase angle. The reasons for these two rules will be explained. The NTW will be shown to match every OGT appeared in last one million years.
Ensemble Methods for Classification of Physical Activities from Wrist Accelerometry.
Chowdhury, Alok Kumar; Tjondronegoro, Dian; Chandran, Vinod; Trost, Stewart G
2017-09-01
To investigate whether the use of ensemble learning algorithms improve physical activity recognition accuracy compared to the single classifier algorithms, and to compare the classification accuracy achieved by three conventional ensemble machine learning methods (bagging, boosting, random forest) and a custom ensemble model comprising four algorithms commonly used for activity recognition (binary decision tree, k nearest neighbor, support vector machine, and neural network). The study used three independent data sets that included wrist-worn accelerometer data. For each data set, a four-step classification framework consisting of data preprocessing, feature extraction, normalization and feature selection, and classifier training and testing was implemented. For the custom ensemble, decisions from the single classifiers were aggregated using three decision fusion methods: weighted majority vote, naïve Bayes combination, and behavior knowledge space combination. Classifiers were cross-validated using leave-one subject out cross-validation and compared on the basis of average F1 scores. In all three data sets, ensemble learning methods consistently outperformed the individual classifiers. Among the conventional ensemble methods, random forest models provided consistently high activity recognition; however, the custom ensemble model using weighted majority voting demonstrated the highest classification accuracy in two of the three data sets. Combining multiple individual classifiers using conventional or custom ensemble learning methods can improve activity recognition accuracy from wrist-worn accelerometer data.
Skill of Global Raw and Postprocessed Ensemble Predictions of Rainfall over Northern Tropical Africa
NASA Astrophysics Data System (ADS)
Vogel, Peter; Knippertz, Peter; Fink, Andreas H.; Schlueter, Andreas; Gneiting, Tilmann
2018-04-01
Accumulated precipitation forecasts are of high socioeconomic importance for agriculturally dominated societies in northern tropical Africa. In this study, we analyze the performance of nine operational global ensemble prediction systems (EPSs) relative to climatology-based forecasts for 1 to 5-day accumulated precipitation based on the monsoon seasons 2007-2014 for three regions within northern tropical Africa. To assess the full potential of raw ensemble forecasts across spatial scales, we apply state-of-the-art statistical postprocessing methods in form of Bayesian Model Averaging (BMA) and Ensemble Model Output Statistics (EMOS), and verify against station and spatially aggregated, satellite-based gridded observations. Raw ensemble forecasts are uncalibrated, unreliable, and underperform relative to climatology, independently of region, accumulation time, monsoon season, and ensemble. Differences between raw ensemble and climatological forecasts are large, and partly stem from poor prediction for low precipitation amounts. BMA and EMOS postprocessed forecasts are calibrated, reliable, and strongly improve on the raw ensembles, but - somewhat disappointingly - typically do not outperform climatology. Most EPSs exhibit slight improvements over the period 2007-2014, but overall have little added value compared to climatology. We suspect that the parametrization of convection is a potential cause for the sobering lack of ensemble forecast skill in a region dominated by mesoscale convective systems.
Local effects of partly-cloudy skies on solar and emitted radiations
NASA Technical Reports Server (NTRS)
Whitney, D. A.; Griffin, T. J.
1983-01-01
Atmospheric aerosol and turbidity measurements were analyzed and the results are presented. The correlation of global insolation with cloud cover fractions for the first complete year's data set was completed. A theoretical model was developed to parameterize the effects of local aerosols upon insolation received at the ground using satellite radiometric data and insolation measurements under clear sky conditions. A February data set, composed of one minute integrated global insolation and direct solar irradiances, cloud cover fractions, meteorological data from nearby weather stations, and GOES East satellite radiometric data was collected to test the model and used to calculate the effects of local aerosols.
Similarity Measures for Protein Ensembles
Lindorff-Larsen, Kresten; Ferkinghoff-Borg, Jesper
2009-01-01
Analyses of similarities and changes in protein conformation can provide important information regarding protein function and evolution. Many scores, including the commonly used root mean square deviation, have therefore been developed to quantify the similarities of different protein conformations. However, instead of examining individual conformations it is in many cases more relevant to analyse ensembles of conformations that have been obtained either through experiments or from methods such as molecular dynamics simulations. We here present three approaches that can be used to compare conformational ensembles in the same way as the root mean square deviation is used to compare individual pairs of structures. The methods are based on the estimation of the probability distributions underlying the ensembles and subsequent comparison of these distributions. We first validate the methods using a synthetic example from molecular dynamics simulations. We then apply the algorithms to revisit the problem of ensemble averaging during structure determination of proteins, and find that an ensemble refinement method is able to recover the correct distribution of conformations better than standard single-molecule refinement. PMID:19145244
Relation between native ensembles and experimental structures of proteins
Best, Robert B.; Lindorff-Larsen, Kresten; DePristo, Mark A.; Vendruscolo, Michele
2006-01-01
Different experimental structures of the same protein or of proteins with high sequence similarity contain many small variations. Here we construct ensembles of “high-sequence similarity Protein Data Bank” (HSP) structures and consider the extent to which such ensembles represent the structural heterogeneity of the native state in solution. We find that different NMR measurements probing structure and dynamics of given proteins in solution, including order parameters, scalar couplings, and residual dipolar couplings, are remarkably well reproduced by their respective high-sequence similarity Protein Data Bank ensembles; moreover, we show that the effects of uncertainties in structure determination are insufficient to explain the results. These results highlight the importance of accounting for native-state protein dynamics in making comparisons with ensemble-averaged experimental data and suggest that even a modest number of structures of a protein determined under different conditions, or with small variations in sequence, capture a representative subset of the true native-state ensemble. PMID:16829580
The specification of personalised insoles using additive manufacturing.
Salles, André S; Gyi, Diane E
2012-01-01
Research has been conducted to explore a process that delivers insoles for personalised footwear for the high street using additive manufacturing (AM) and to evaluate the use of such insoles in terms of discomfort. Therefore, the footwear personalisation process was first identified: (1) foot capture; (2) anthropometric measurements; (3) insole design; and (4) additive manufacturing. In order to explore and evaluate this process, recreational runners were recruited. They had both feet scanned and 15 anthropometric measurements taken. Personalised insoles were designed from the scans and manufactured using AM. Participants were fitted with footwear under two experimental conditions: personalised and control, which were compared in terms of discomfort. The mean ratings for discomfort variables were generally low for both conditions and no significant differences were detected between conditions. In general, the personalisation process showed promise in terms of the scan data, although the foot capture position may not be considered 'gold standard'. Polyamide, the material used for the insoles, demonstrated positive attributes: visual inspection revealed no signs of breaking. The footwear personalisation process described and explored in this study shows potential and can be considered a good starting point for designer and researchers.
Testing competing forms of the Milankovitch hypothesis: A multivariate approach
NASA Astrophysics Data System (ADS)
Kaufmann, Robert K.; Juselius, Katarina
2016-02-01
We test competing forms of the Milankovitch hypothesis by estimating the coefficients and diagnostic statistics for a cointegrated vector autoregressive model that includes 10 climate variables and four exogenous variables for solar insolation. The estimates are consistent with the physical mechanisms postulated to drive glacial cycles. They show that the climate variables are driven partly by solar insolation, determining the timing and magnitude of glaciations and terminations, and partly by internal feedback dynamics, pushing the climate variables away from equilibrium. We argue that the latter is consistent with a weak form of the Milankovitch hypothesis and that it should be restated as follows: internal climate dynamics impose perturbations on glacial cycles that are driven by solar insolation. Our results show that these perturbations are likely caused by slow adjustment between land ice volume and solar insolation. The estimated adjustment dynamics show that solar insolation affects an array of climate variables other than ice volume, each at a unique rate. This implies that previous efforts to test the strong form of the Milankovitch hypothesis by examining the relationship between solar insolation and a single climate variable are likely to suffer from omitted variable bias.
Hasan, Hosni; Davids, Keith; Chow, Jia Yi; Kerr, Graham
2017-04-01
This study investigated effects of wearing compression garments and textured insoles on modes of movement organisation emerging during performance of lower limb interceptive actions in association football. Participants were six skilled (age = 15.67 ± 0.74 years) and six less-skilled (age = 15.17 ± 1.1 years) football players. All participants performed 20 instep kicks with maximum velocity in four randomly organised insoles and socks conditions, (a) Smooth Socks with Smooth Insoles (SSSI); (b) Smooth Socks with Textured Insoles (SSTI); (c) Compression Socks with Smooth Insoles (CSSI); and (d), Compression Socks with Textured Insoles (CSTI). Results showed that, when wearing textured and compression materials (CSSI condition), less-skilled participants displayed significantly greater hip extension and flexion towards the ball contact phase, indicating larger ranges of motion in the kicking limb than in other conditions. Less-skilled participants also demonstrated greater variability in knee-ankle intralimb (angle-angle plots) coordination modes in the CSTI condition. Findings suggested that use of textured and compression materials increased attunement to somatosensory information from lower limb movement, to regulate performance of dynamic interceptive actions like kicking, especially in less-skilled individuals.
Wind power application research on the fusion of the determination and ensemble prediction
NASA Astrophysics Data System (ADS)
Lan, Shi; Lina, Xu; Yuzhu, Hao
2017-07-01
The fused product of wind speed for the wind farm is designed through the use of wind speed products of ensemble prediction from the European Centre for Medium-Range Weather Forecasts (ECMWF) and professional numerical model products on wind power based on Mesoscale Model5 (MM5) and Beijing Rapid Update Cycle (BJ-RUC), which are suitable for short-term wind power forecasting and electric dispatch. The single-valued forecast is formed by calculating the different ensemble statistics of the Bayesian probabilistic forecasting representing the uncertainty of ECMWF ensemble prediction. Using autoregressive integrated moving average (ARIMA) model to improve the time resolution of the single-valued forecast, and based on the Bayesian model averaging (BMA) and the deterministic numerical model prediction, the optimal wind speed forecasting curve and the confidence interval are provided. The result shows that the fusion forecast has made obvious improvement to the accuracy relative to the existing numerical forecasting products. Compared with the 0-24 h existing deterministic forecast in the validation period, the mean absolute error (MAE) is decreased by 24.3 % and the correlation coefficient (R) is increased by 12.5 %. In comparison with the ECMWF ensemble forecast, the MAE is reduced by 11.7 %, and R is increased 14.5 %. Additionally, MAE did not increase with the prolongation of the forecast ahead.
Collins, Natalie J; Hinman, Rana S; Menz, Hylton B; Crossley, Kay M
2017-01-01
The purpose of the study was to determine whether prefabricated foot orthoses immediately reduce pain during functional tasks in people with patellofemoral osteoarthritis, compared to flat insoles and shoes alone. Eighteen people with predominant lateral patellofemoral osteoarthritis (nine women; mean [SD] age 59 [10]years; body mass index 27.9 [3.2]kg/m 2 ) performed functional tasks wearing running sandals, and then wearing foot orthoses and flat insoles (random order). Participants rated knee pain during each task (11-point numerical rating scales), ease of performance and knee stability (five-point Likert scales), and comfort (100mm visual analogue scales). Compared to shoes alone, foot orthoses (p=0.002; median difference 1.5 [IQR 3]) and flat insoles (p<0.001; 2 [3]) significantly reduced pain during step-downs; foot orthoses reduced pain during walking (p=0.008; 1 [1.25]); and flat insoles reduced pain during stair ambulation (p=0.001; 1 [1.75]). No significant differences between foot orthoses and flat insoles were observed for pain severity, ease of performance or knee stability. Foot orthoses were less comfortable than flat insoles and shoes alone (p<0.05). In people with patellofemoral osteoarthritis, immediate pain-relieving effects of prefabricated, contoured foot orthoses are equivalent to flat insoles. Further studies should investigate whether similar outcomes occur with longer-term wear or different orthosis designs. Copyright © 2016 Elsevier B.V. All rights reserved.
NASA Astrophysics Data System (ADS)
Yeom, Jong-Min; Han, Kyung-Soo; Kim, Jae-Jin
2012-05-01
Solar surface insolation (SSI) represents how much solar radiance reaches the Earth's surface in a specified area and is an important parameter in various fields such as surface energy research, meteorology, and climate change. This study calculates insolation using Multi-functional Transport Satellite (MTSAT-1R) data with a simplified cloud factor over Northeast Asia. For SSI retrieval from the geostationary satellite data, the physical model of Kawamura is modified to improve insolation estimation by considering various atmospheric constituents, such as Rayleigh scattering, water vapor, ozone, aerosols, and clouds. For more accurate atmospheric parameterization, satellite-based atmospheric constituents are used instead of constant values when estimating insolation. Cloud effects are a key problem in insolation estimation because of their complicated optical characteristics and high temporal and spatial variation. The accuracy of insolation data from satellites depends on how well cloud attenuation as a function of geostationary channels and angle can be inferred. This study uses a simplified cloud factor that depends on the reflectance and solar zenith angle. Empirical criteria to select reference data for fitting to the ground station data are applied to suggest simplified cloud factor methods. Insolation estimated using the cloud factor is compared with results of the unmodified physical model and with observations by ground-based pyranometers located in the Korean peninsula. The modified model results show far better agreement with ground truth data compared to estimates using the conventional method under overcast conditions.
Liu, Xuan; Zhang, Ming
2013-01-01
Laterally wedged insoles are widely applied in the conservative treatment for medial knee osteoarthritis. Experimental studies have been conducted to understand the effectiveness of such an orthotic intervention. However, the information was limited to the joint external loading such as knee adduction moment. The internal stress distribution is difficult to be obtained from in vivo experiment alone. Thus, a three-dimensional finite element model of the human knee-ankle-foot complex, together with orthosis, was developed in this study and used to investigate the redistribution of knee stress using laterally wedged insole intervention. Laterally wedged insoles with wedge angles of 0, 5, and 10° were fabricated for intervention. The subject-specific geometry of the lower extremity with details was characterized in the reconstruction of MR images. Motion analysis data and muscle forces were input to drive the model. The established finite element model was employed to investigate the loading responses of tibiofemoral articulation in three wedge angle conditions during simulated walking stance phase. With either of the 5° or 10° laterally wedged insole, significant decreases in von Mises stress and contact force at the medial femur cartilage region and the medial meniscus were predicted comparing with the 0° insole. The diminished stress and contact force at the medial compartment of the knee joint demonstrate the immediate effect of the laterally wedged insoles. The intervention may contribute to medial knee osteoarthritis rehabilitation. Copyright © 2012 Elsevier Ltd. All rights reserved.
A 3D Visualization and Analysis Model of the Earth Orbit, Milankovitch Cycles and Insolation.
NASA Astrophysics Data System (ADS)
Kostadinov, Tihomir; Gilb, Roy
2013-04-01
Milankovitch theory postulates that periodic variability of Earth's orbital elements is a major climate forcing mechanism. Although controversies remain, ample geologic evidence supports the major role of the Milankovitch cycles in climate, e.g. glacial-interglacial cycles. There are three Milankovitch orbital parameters: orbital eccentricity (main periodicities of ~100,000 and ~400,000 years), precession (quantified as the longitude of perihelion, main periodicities 19,000-24,000 years) and obliquity of the ecliptic (Earth's axial tilt, main periodicity 41,000 years). The combination of these parameters controls the spatio-temporal patterns of incoming solar radiation (insolation) and the timing of the seasons with respect to perihelion, as well as season duration. The complex interplay of the Milankovitch orbital parameters on various time scales makes assessment and visualization of Earth's orbit and insolation variability challenging. It is difficult to appreciate the pivotal importance of Kepler's laws of planetary motion in controlling the effects of Milankovitch cycles on insolation patterns. These factors also make Earth-Sun geometry and Milankovitch theory difficult to teach effectively. Here, an astronomically precise and accurate Earth orbit visualization model is presented. The model offers 3D visualizations of Earth's orbital geometry, Milankovitch parameters and the ensuing insolation forcings. Both research and educational uses are envisioned for the model, which is developed in Matlab® as a user-friendly graphical user interface (GUI). We present the user with a choice between the Berger et al. (1978) and Laskar et al. (2004) astronomical solutions for eccentricity, obliquity and precession. A "demo" mode is also available, which allows the three Milankovitch parameters to be varied independently of each other (and over much larger ranges than the naturally occurring ones), so the user can isolate the effects of each parameter on orbital geometry, the seasons, and insolation. Users select a calendar date and the Earth is placed in its orbit using Kepler's laws; the calendar can be started on either vernal equinox (March 20) or perihelion (Jan. 3). Global insolation is computed as a function of latitude and day of year, using the chosen Milankovitch parameters. 3D surface plots of insolation and insolation anomalies (with respect to J2000) are then produced. Insolation computations use the model's own orbital geometry with no additional a-priori input other than the Milankovitch parameter solutions. Insolation computations are successfully validated against Laskar et al. (2004) values. The model outputs other relevant parameters as well, e.g. Earth's radius-vector length, solar declination and day length for the chosen date and latitude. Time-series plots of the Milankovitch parameters and EPICA ice core CO2 and temperature data can be produced. Envisioned future developments include computational efficiency improvements, more options for insolation plots on user-chosen spatio-temporal scales, and overlaying additional paleoclimatological proxy data.
Propulsion element requirements using electrical power system unscheduled power
NASA Technical Reports Server (NTRS)
Zimmermann, Frank; Hodge, Kathy
1989-01-01
The suitability of using the electrical energy from the Space Station's Electrical Power System (EPS) during the periods of peak solar insolation which is currently not specifically allocated (unscheduled power) to produce propulsion propellants, gaseous hydrogen, and oxygen by electrolyzing water is investigated. Reboost propellant requirements are emphasized, but the results are more generally relevant because the balance of recurring propellant requirements are an order of magnitude smaller and the nonrecurring requirements are not significant on an average basis.
A statistical test for the habitable zone concept
NASA Astrophysics Data System (ADS)
Checlair, J.; Abbot, D. S.
2017-12-01
Traditional habitable zone theory assumes that the silicate-weathering feedback regulates the atmospheric CO2 of planets within the habitable zone to maintain surface temperatures that allow for liquid water. There is some non-definitive evidence that this feedback has worked in Earth history, but it is untested in an exoplanet context. A critical prediction of the silicate-weathering feedback is that, on average, within the habitable zone planets that receive a higher stellar flux should have a lower CO2 in order to maintain liquid water at their surface. We can test this prediction directly by using a statistical approach involving low-precision CO2 measurements on many planets with future instruments such as JWST, LUVOIR, or HabEx. The purpose of this work is to carefully outline the requirements for such a test. First, we use a radiative-transfer model to compute the amount of CO2 necessary to maintain surface liquid water on planets for different values of insolation and planetary parameters. We run a large ensemble of Earth-like planets with different masses, atmospheric masses, inert atmospheric composition, cloud composition and level, and other greenhouse gases. Second, we post-process this data to determine the precision with which future instruments such as JWST, LUVOIR, and HabEx could measure the CO2. We then combine the variation due to planetary parameters and observational error to determine the number of planet measurements that would be needed to effectively marginalize over uncertainties and resolve the predicted trend in CO2 vs. stellar flux. The results of this work may influence the usage of JWST and will enhance mission planning for LUVOIR and HabEx.
Temporal correlation functions of concentration fluctuations: an anomalous case.
Lubelski, Ariel; Klafter, Joseph
2008-10-09
We calculate, within the framework of the continuous time random walk (CTRW) model, multiparticle temporal correlation functions of concentration fluctuations (CCF) in systems that display anomalous subdiffusion. The subdiffusion stems from the nonstationary nature of the CTRW waiting times, which also lead to aging and ergodicity breaking. Due to aging, a system of diffusing particles tends to slow down as time progresses, and therefore, the temporal correlation functions strongly depend on the initial time of measurement. As a consequence, time averages of the CCF differ from ensemble averages, displaying therefore ergodicity breaking. We provide a simple example that demonstrates the difference between these two averages, a difference that might be amenable to experimental tests. We focus on the case of ensemble averaging and assume that the preparation time of the system coincides with the starting time of the measurement. Our analytical calculations are supported by computer simulations based on the CTRW model.
Wang, Xueyi; Davidson, Nicholas J.
2011-01-01
Ensemble methods have been widely used to improve prediction accuracy over individual classifiers. In this paper, we achieve a few results about the prediction accuracies of ensemble methods for binary classification that are missed or misinterpreted in previous literature. First we show the upper and lower bounds of the prediction accuracies (i.e. the best and worst possible prediction accuracies) of ensemble methods. Next we show that an ensemble method can achieve > 0.5 prediction accuracy, while individual classifiers have < 0.5 prediction accuracies. Furthermore, for individual classifiers with different prediction accuracies, the average of the individual accuracies determines the upper and lower bounds. We perform two experiments to verify the results and show that it is hard to achieve the upper and lower bounds accuracies by random individual classifiers and better algorithms need to be developed. PMID:21853162
Enhancing Flood Prediction Reliability Using Bayesian Model Averaging
NASA Astrophysics Data System (ADS)
Liu, Z.; Merwade, V.
2017-12-01
Uncertainty analysis is an indispensable part of modeling the hydrology and hydrodynamics of non-idealized environmental systems. Compared to reliance on prediction from one model simulation, using on ensemble of predictions that consider uncertainty from different sources is more reliable. In this study, Bayesian model averaging (BMA) is applied to Black River watershed in Arkansas and Missouri by combining multi-model simulations to get reliable deterministic water stage and probabilistic inundation extent predictions. The simulation ensemble is generated from 81 LISFLOOD-FP subgrid model configurations that include uncertainty from channel shape, channel width, channel roughness and discharge. Model simulation outputs are trained with observed water stage data during one flood event, and BMA prediction ability is validated for another flood event. Results from this study indicate that BMA does not always outperform all members in the ensemble, but it provides relatively robust deterministic flood stage predictions across the basin. Station based BMA (BMA_S) water stage prediction has better performance than global based BMA (BMA_G) prediction which is superior to the ensemble mean prediction. Additionally, high-frequency flood inundation extent (probability greater than 60%) in BMA_G probabilistic map is more accurate than the probabilistic flood inundation extent based on equal weights.
Girsanov reweighting for path ensembles and Markov state models
NASA Astrophysics Data System (ADS)
Donati, L.; Hartmann, C.; Keller, B. G.
2017-06-01
The sensitivity of molecular dynamics on changes in the potential energy function plays an important role in understanding the dynamics and function of complex molecules. We present a method to obtain path ensemble averages of a perturbed dynamics from a set of paths generated by a reference dynamics. It is based on the concept of path probability measure and the Girsanov theorem, a result from stochastic analysis to estimate a change of measure of a path ensemble. Since Markov state models (MSMs) of the molecular dynamics can be formulated as a combined phase-space and path ensemble average, the method can be extended to reweight MSMs by combining it with a reweighting of the Boltzmann distribution. We demonstrate how to efficiently implement the Girsanov reweighting in a molecular dynamics simulation program by calculating parts of the reweighting factor "on the fly" during the simulation, and we benchmark the method on test systems ranging from a two-dimensional diffusion process and an artificial many-body system to alanine dipeptide and valine dipeptide in implicit and explicit water. The method can be used to study the sensitivity of molecular dynamics on external perturbations as well as to reweight trajectories generated by enhanced sampling schemes to the original dynamics.
Billings, Stephen A.; Pavic, Aleksandar; Guo, Ling-Zhong
2017-01-01
Measurement of the ground reaction forces (GRF) during walking is typically limited to laboratory settings, and only short observations using wearable pressure insoles have been reported so far. In this study, a new proxy measurement method is proposed to estimate the vertical component of the GRF (vGRF) from wearable accelerometer signals. The accelerations are used as the proxy variable. An orthogonal forward regression algorithm (OFR) is employed to identify the dynamic relationships between the proxy variables and the measured vGRF using pressure-sensing insoles. The obtained model, which represents the connection between the proxy variable and the vGRF, is then used to predict the latter. The results have been validated using pressure insoles data collected from nine healthy individuals under two outdoor walking tasks in non-laboratory settings. The results show that the vGRFs can be reconstructed with high accuracy (with an average prediction error of less than 5.0%) using only one wearable sensor mounted at the waist (L5, fifth lumbar vertebra). Proxy measures with different sensor positions are also discussed. Results show that the waist acceleration-based proxy measurement is more stable with less inter-task and inter-subject variability than the proxy measures based on forehead level accelerations. The proposed proxy measure provides a promising low-cost method for monitoring ground reaction forces in real-life settings and introduces a novel generic approach for replacing the direct determination of difficult to measure variables in many applications. PMID:28937593
NASA Astrophysics Data System (ADS)
Rahardiantoro, S.; Sartono, B.; Kurnia, A.
2017-03-01
In recent years, DNA methylation has been the special issue to reveal the pattern of a lot of human diseases. Huge amount of data would be the inescapable phenomenon in this case. In addition, some researchers interesting to take some predictions based on these huge data, especially using regression analysis. The classical approach would be failed to take the task. Model averaging by Ando and Li [1] could be an alternative approach to face this problem. This research applied the model averaging to get the best prediction in high dimension of data. In the practice, the case study by Vargas et al [3], data of exposure to aflatoxin B1 (AFB1) and DNA methylation in white blood cells of infants in The Gambia, take the implementation of model averaging. The best ensemble model selected based on the minimum of MAPE, MAE, and MSE of predictions. The result is ensemble model by model averaging with number of predictors in model candidate is 15.
Braun, Benedikt J; Bushuven, Eva; Hell, Rebecca; Veith, Nils T; Buschbaum, Jan; Holstein, Joerg H; Pohlemann, Tim
2016-02-01
Weight bearing after lower extremity fractures still remains a highly controversial issue. Even in ankle fractures, the most common lower extremity injury no standard aftercare protocol has been established. Average non weight bearing times range from 0 to 7 weeks, with standardised, radiological healing controls at fixed time intervals. Recent literature calls for patient-adapted aftercare protocols based on individual fracture and load scenarios. We show the clinical feasibility and first results of a new, insole embedded gait analysis tool for continuous monitoring of gait, load and activity. Ten patients were monitored with a new, independent gait analysis insole for up to 3 months postoperatively. Strict 20 kg partial weight bearing was ordered for 6 weeks. Overall activity, load spectrum, ground reaction forces, clinical scoring and general health data were recorded and correlated. Statistical analysis with power analysis, t-test and Spearman correlation was performed. Only one patient completely adhered to the set weight bearing limit. Average time in minutes over the limit was 374 min. Based on the parameters load, activity, gait time over 20 kg weight bearing and maximum ground reaction force high and low performers were defined after 3 weeks. Significant difference in time to painless full weight bearing between high and low performers was shown. Correlation analysis revealed a significant correlation between weight bearing and clinical scoring as well as pain (American Orthopaedic Foot and Ankle Society (AOFAS) Score rs=0.74; Olerud-Molander Score rs=0.93; VAS pain rs=-0.95). Early, continuous gait analysis is able to define aftercare performers with significant differences in time to full painless weight bearing where clinical or radiographic controls could not. Patient compliance to standardised weight bearing limits and protocols is low. Highly individual rehabilitation patterns were seen in all patients. Aftercare protocols should be adjusted to real-time patient conditions, rather than fixed intervals and limits. With a real-time measuring device high performers could be identified and influenced towards optimal healing conditions early, while low performers are recognised and missing healing influences could be corrected according to patient condition. Copyright © 2015 Elsevier Ltd. All rights reserved.
NASA Astrophysics Data System (ADS)
Brines, M.; Dall'Osto, M.; Beddows, D. C. S.; Harrison, R. M.; Gómez-Moreno, F.; Núñez, L.; Artíñano, B.; Costabile, F.; Gobbi, G. P.; Salimi, F.; Morawska, L.; Sioutas, C.; Querol, X.
2015-05-01
Road traffic emissions are often considered the main source of ultrafine particles (UFP, diameter smaller than 100 nm) in urban environments. However, recent studies worldwide have shown that - in high-insolation urban regions at least - new particle formation events can also contribute to UFP. In order to quantify such events we systematically studied three cities located in predominantly sunny environments: Barcelona (Spain), Madrid (Spain) and Brisbane (Australia). Three long-term data sets (1-2 years) of fine and ultrafine particle number size distributions (measured by SMPS, Scanning Mobility Particle Sizer) were analysed. Compared to total particle number concentrations, aerosol size distributions offer far more information on the type, origin and atmospheric evolution of the particles. By applying k-means clustering analysis, we categorized the collected aerosol size distributions into three main categories: "Traffic" (prevailing 44-63% of the time), "Nucleation" (14-19%) and "Background pollution and Specific cases" (7-22%). Measurements from Rome (Italy) and Los Angeles (USA) were also included to complement the study. The daily variation of the average UFP concentrations for a typical nucleation day at each site revealed a similar pattern for all cities, with three distinct particle bursts. A morning and an evening spike reflected traffic rush hours, whereas a third one at midday showed nucleation events. The photochemically nucleated particles' burst lasted 1-4 h, reaching sizes of 30-40 nm. On average, the occurrence of particle size spectra dominated by nucleation events was 16% of the time, showing the importance of this process as a source of UFP in urban environments exposed to high solar radiation. Nucleation events lasting for 2 h or more occurred on 55% of the days, this extending to > 4 h in 28% of the days, demonstrating that atmospheric conditions in urban environments are not favourable to the growth of photochemically nucleated particles. In summary, although traffic remains the main source of UFP in urban areas, in developed countries with high insolation urban nucleation events are also a main source of UFP. If traffic-related particle concentrations are reduced in the future, nucleation events will likely increase in urban areas, due to the reduced urban condensation sinks.
Estimation of clear-sky insolation using satellite and ground meteorological data
NASA Technical Reports Server (NTRS)
Staylor, W. F.; Darnell, W. L.; Gupta, S. K.
1983-01-01
Ground based pyranometer measurements were combined with meteorological data from the Tiros N satellite in order to estimate clear-sky insolations at five U.S. sites for five weeks during the spring of 1979. The estimates were used to develop a semi-empirical model of clear-sky insolation for the interpretation of input data from the Tiros Operational Vertical Sounder (TOVS). Using only satellite data, the estimated standard errors in the model were about 2 percent. The introduction of ground based data reduced errors to around 1 percent. It is shown that although the errors in the model were reduced by only 1 percent, TOVS data products are still adequate for estimating clear-sky insolation.
Safdari, Hadiseh; Cherstvy, Andrey G; Chechkin, Aleksei V; Bodrova, Anna; Metzler, Ralf
2017-01-01
We investigate both analytically and by computer simulations the ensemble- and time-averaged, nonergodic, and aging properties of massive particles diffusing in a medium with a time dependent diffusivity. We call this stochastic diffusion process the (aging) underdamped scaled Brownian motion (UDSBM). We demonstrate how the mean squared displacement (MSD) and the time-averaged MSD of UDSBM are affected by the inertial term in the Langevin equation, both at short, intermediate, and even long diffusion times. In particular, we quantify the ballistic regime for the MSD and the time-averaged MSD as well as the spread of individual time-averaged MSD trajectories. One of the main effects we observe is that, both for the MSD and the time-averaged MSD, for superdiffusive UDSBM the ballistic regime is much shorter than for ordinary Brownian motion. In contrast, for subdiffusive UDSBM, the ballistic region extends to much longer diffusion times. Therefore, particular care needs to be taken under what conditions the overdamped limit indeed provides a correct description, even in the long time limit. We also analyze to what extent ergodicity in the Boltzmann-Khinchin sense in this nonstationary system is broken, both for subdiffusive and superdiffusive UDSBM. Finally, the limiting case of ultraslow UDSBM is considered, with a mixed logarithmic and power-law dependence of the ensemble- and time-averaged MSDs of the particles. In the limit of strong aging, remarkably, the ordinary UDSBM and the ultraslow UDSBM behave similarly in the short time ballistic limit. The approaches developed here open ways for considering other stochastic processes under physically important conditions when a finite particle mass and aging in the system cannot be neglected.
NASA Astrophysics Data System (ADS)
Safdari, Hadiseh; Cherstvy, Andrey G.; Chechkin, Aleksei V.; Bodrova, Anna; Metzler, Ralf
2017-01-01
We investigate both analytically and by computer simulations the ensemble- and time-averaged, nonergodic, and aging properties of massive particles diffusing in a medium with a time dependent diffusivity. We call this stochastic diffusion process the (aging) underdamped scaled Brownian motion (UDSBM). We demonstrate how the mean squared displacement (MSD) and the time-averaged MSD of UDSBM are affected by the inertial term in the Langevin equation, both at short, intermediate, and even long diffusion times. In particular, we quantify the ballistic regime for the MSD and the time-averaged MSD as well as the spread of individual time-averaged MSD trajectories. One of the main effects we observe is that, both for the MSD and the time-averaged MSD, for superdiffusive UDSBM the ballistic regime is much shorter than for ordinary Brownian motion. In contrast, for subdiffusive UDSBM, the ballistic region extends to much longer diffusion times. Therefore, particular care needs to be taken under what conditions the overdamped limit indeed provides a correct description, even in the long time limit. We also analyze to what extent ergodicity in the Boltzmann-Khinchin sense in this nonstationary system is broken, both for subdiffusive and superdiffusive UDSBM. Finally, the limiting case of ultraslow UDSBM is considered, with a mixed logarithmic and power-law dependence of the ensemble- and time-averaged MSDs of the particles. In the limit of strong aging, remarkably, the ordinary UDSBM and the ultraslow UDSBM behave similarly in the short time ballistic limit. The approaches developed here open ways for considering other stochastic processes under physically important conditions when a finite particle mass and aging in the system cannot be neglected.
NASA Technical Reports Server (NTRS)
Mckenney, D. B.; Beauchamp, W. T.
1975-01-01
It has become apparent in recent years that solar energy can be used for electric power production by several methods. Because of the diffuse nature of the solar insolation, the area involved in any central power plant design can encompass several square miles. A detailed design of these large area collection systems will require precise knowledge of the local solar insolation. Detailed information will also be needed concerning the temporal nature of the insolation and the local spatial distribution. Therefore, insolation data was collected and analyzed for a network of sensors distributed over an area of several square kilometers in Arizona. The analyses of this data yielded probability distributions of cloud size, velocity, and direction of motion which were compared with data obtained from the National Weather Service. Microclimatological analyses were also performed for suitable modeling parameters pertinent to large scale electric power plant design. Instrumentation used to collect the data is described.
Development of inexpensive prosthetic feet for high-heeled shoes using simple shoe insole model.
Meier, Margrit R; Tucker, Kerice A; Hansen, Andrew H
2014-01-01
The large majority of prosthetic feet are aimed at low-heeled shoes, with a few models allowing a heel height of up to 5 cm. However, a survey by the American Podiatric Medical Association indicates that most women wear heels over 5 cm; thus, current prosthetic feet limit most female prosthesis users in their choice. Some prosthetic foot components are heel-height adjustable; however, their plantar surface shapes do not change to match the insole shapes of the shoes with different heel heights. The aims of the study were therefore (1) to develop a model that allows prediction of insole shape for various heel height shoes in combination with different shoe sizes and (2) to develop and field-test low-cost prototypes of prosthetic feet whose insole shapes were based on the new model. An equation was developed to calculate insole shapes independent of shoe size. Field testing of prototype prosthetic feet fabricated based on the equation was successful and demonstrated the utility of the equation.
Bulk Insolation Models as Predictors for Locations for High Lunar Hydrogen Concentrations
NASA Technical Reports Server (NTRS)
Mcclanahan, T. P.; Mitrofanov, I.G.; Boynton, W. V.; Chin, G.; Starr, R. D.; Evans, L. G.; Sanin, A.; Livengood, T.; Sagdeev, R.; Milikh, G.
2013-01-01
In this study we consider the bulk effects of surface illumination on topography (insolation) and the possible thermodynamic effects on the Moon's hydrogen budget. Insolation is important as one of the dominant loss processes governing distributions of hydrogen volatiles on the Earth, Mars and most recently Mercury. We evaluated three types of high latitude > 65 deg., illumination models that were derived from the Lunar Observing Laser Altimetry (LOLA) digital elevation models (DEM)'s. These models reflect varying accounts of solar flux interactions with the Moon's near-surface. We correlate these models with orbital collimated epithermal neutron measurements made by the Lunar Exploration Neutron Detector (LEND). LEND's measurements derive the Moon's spatial distributions of hydrogen concentration. To perform this analysis we transformed the topographic model into an insolation model described by two variables as each pixels 1) slope and 2) slope angular orientation with respect to the pole. We then decomposed the illumination models and epithermal maps as a function of the insolation model and correlate the datasets.
Schur polynomials and biorthogonal random matrix ensembles
DOE Office of Scientific and Technical Information (OSTI.GOV)
Tierz, Miguel
The study of the average of Schur polynomials over a Stieltjes-Wigert ensemble has been carried out by Dolivet and Tierz [J. Math. Phys. 48, 023507 (2007); e-print arXiv:hep-th/0609167], where it was shown that it is equal to quantum dimensions. Using the same approach, we extend the result to the biorthogonal case. We also study, using the Littlewood-Richardson rule, some particular cases of the quantum dimension result. Finally, we show that the notion of Giambelli compatibility of Schur averages, introduced by Borodin et al. [Adv. Appl. Math. 37, 209 (2006); e-print arXiv:math-ph/0505021], also holds in the biorthogonal setting.
NASA Astrophysics Data System (ADS)
Safdari, Hadiseh; Chechkin, Aleksei V.; Jafari, Gholamreza R.; Metzler, Ralf
2015-04-01
Scaled Brownian motion (SBM) is widely used to model anomalous diffusion of passive tracers in complex and biological systems. It is a highly nonstationary process governed by the Langevin equation for Brownian motion, however, with a power-law time dependence of the noise strength. Here we study the aging properties of SBM for both unconfined and confined motion. Specifically, we derive the ensemble and time averaged mean squared displacements and analyze their behavior in the regimes of weak, intermediate, and strong aging. A very rich behavior is revealed for confined aging SBM depending on different aging times and whether the process is sub- or superdiffusive. We demonstrate that the information on the aging factorizes with respect to the lag time and exhibits a functional form that is identical to the aging behavior of scale-free continuous time random walk processes. While SBM exhibits a disparity between ensemble and time averaged observables and is thus weakly nonergodic, strong aging is shown to effect a convergence of the ensemble and time averaged mean squared displacement. Finally, we derive the density of first passage times in the semi-infinite domain that features a crossover defined by the aging time.
Safdari, Hadiseh; Chechkin, Aleksei V; Jafari, Gholamreza R; Metzler, Ralf
2015-04-01
Scaled Brownian motion (SBM) is widely used to model anomalous diffusion of passive tracers in complex and biological systems. It is a highly nonstationary process governed by the Langevin equation for Brownian motion, however, with a power-law time dependence of the noise strength. Here we study the aging properties of SBM for both unconfined and confined motion. Specifically, we derive the ensemble and time averaged mean squared displacements and analyze their behavior in the regimes of weak, intermediate, and strong aging. A very rich behavior is revealed for confined aging SBM depending on different aging times and whether the process is sub- or superdiffusive. We demonstrate that the information on the aging factorizes with respect to the lag time and exhibits a functional form that is identical to the aging behavior of scale-free continuous time random walk processes. While SBM exhibits a disparity between ensemble and time averaged observables and is thus weakly nonergodic, strong aging is shown to effect a convergence of the ensemble and time averaged mean squared displacement. Finally, we derive the density of first passage times in the semi-infinite domain that features a crossover defined by the aging time.
Climatic Models Ensemble-based Mid-21st Century Runoff Projections: A Bayesian Framework
NASA Astrophysics Data System (ADS)
Achieng, K. O.; Zhu, J.
2017-12-01
There are a number of North American Regional Climate Change Assessment Program (NARCCAP) climatic models that have been used to project surface runoff in the mid-21st century. Statistical model selection techniques are often used to select the model that best fits data. However, model selection techniques often lead to different conclusions. In this study, ten models are averaged in Bayesian paradigm to project runoff. Bayesian Model Averaging (BMA) is used to project and identify effect of model uncertainty on future runoff projections. Baseflow separation - a two-digital filter which is also called Eckhardt filter - is used to separate USGS streamflow (total runoff) into two components: baseflow and surface runoff. We use this surface runoff as the a priori runoff when conducting BMA of runoff simulated from the ten RCM models. The primary objective of this study is to evaluate how well RCM multi-model ensembles simulate surface runoff, in a Bayesian framework. Specifically, we investigate and discuss the following questions: How well do ten RCM models ensemble jointly simulate surface runoff by averaging over all the models using BMA, given a priori surface runoff? What are the effects of model uncertainty on surface runoff simulation?
Oceanic Tidal Mixing As a Contributor to Milankovitch-scale Climate Change
NASA Technical Reports Server (NTRS)
Munk, Walter; Bills, Bruce
2004-01-01
We propose that changes in the magnitude of oceanic tidal mixing on long time scales is an important, but previously unrecognized, contributor to global climate change. it is well known that Earth's orbital and rotational state changes significantly on 10(exp 4)-10(exp 5) year time scales, and that this influences the spatial and temporal pattern of incident radiation. It is widely supposed that climatic variations on these same time scales are, in large part, a response of the ocean-atmosphere-cryosphere system to this radiative forcing. Our proposal is that variations in the luni-solar tidal potential, induced by these same orbital and rotational variations, influences oceanic mixing and thus modulates meridional heat transport, by amounts which are competitive with the radiative forcing. There are some obvious differences between tidal potential and insolation. First is that the Sun and Moon both contribute to tides, whereas the radiation is entirely of solar origin. Second is that the Earth is transparent to gravity but opaque to radiation. Clipping associated with this opacity makes the radiation pattern temporal spectrum rather more complex than the tidal spectrum. A third point is that solar radiation directly delivers energy to Earth's surface whereas tidal mixing will only expedite lateral transport of heat in association with oceanic thermohaline circulation. The diurnal average insolation pattern is best parameterized via a Fourier series in time of year and Legendre polynomials in sine of latitude. Our present focus will be on the annual average terms. The Legendre degree n=0 term describes the global average insolation, and is nearly constant. The degree n=l term describes differences between northern and southern hemispheres, and the annual mean is zero. The degree n=2 term is the main contributor to the equator to pole variations, and varies with obliquity and orbital eccentricity, with the obliquity variation dominating. The lowest order decomposition of the tidal potential recognizes 3 constituents: semi-diurnal, diurnal, and long period, with solar and lunar contributions to each. Our present focus will be on long term variations in the mean square amplitude of the semi-diurnal constituent, with averaging over all the short period variations. For the solar tide that includes the day and year. For the lunar tide it includes the day, month, year, and the apsidal (8.85 year) and nodal (18.6 year) periods. We present calculations of the variations in radiative and tidal forcing for the past 3 million years. The two signals are quite similar. Both vary by approximately 1% of their respective mean values, are dominated by obliquity variations, and exhibit only secondary influence from orbital eccentricity.
Oceanic Tidal Mixing as a Contributor to Milankovitch-scale Climate Change
NASA Astrophysics Data System (ADS)
Munk, W.; Bills, B. G.
2004-12-01
We propose that changes in the magnitude of oceanic tidal mixing on long time scales is an important, but previously unrecognized, contributor to global climate change. It is well known that Earth's orbital and rotational state changes significantly on 104-105 year time scales, and that this influences the spatial and temporal pattern of incident radiation. It is widely supposed that climatic variations on these same time scales are, in large part, a response of the ocean-atmosphere-cryosphere system to this radiative forcing. Our proposal is that variations in the luni-solar tidal potential, induced by these same orbital and rotational variations, influences oceanic mixing and thus modulates meridional heat transport, by amounts which are competitive with the radiative forcing. There are some obvious differences between tidal potential and insolation. First is that the Sun and Moon both contribute to tides, whereas the radiation is entirely of solar origin. Second is that the Earth is transparent to gravity but opaque to radiation. Clipping associated with this opacity makes the radiation pattern temporal spectrum rather more complex than the tidal spectrum. A third point is that solar radiation directly delivers energy to Earth's surface whereas tidal mixing will only expedite lateral transport of heat in association with oceanic thermo-haline circulation. The diurnal average insolation pattern is best parameterized via a Fourier series in time of year and Legendre polynomials in sine of latitude. Our present focus will be on the annual average terms. The Legendre degree n=0 term describes the global average insolation, and is nearly constant. The degree n=1 term describes differences between northern and southern hemispheres, and the annual mean is zero. The degree n=2 term is the main contributor to the equator to pole variations, and varies with obliquity and orbital eccentricity, with the obliquity variation dominating. The lowest order decomposition of the tidal potential recognizes 3 constituents: semi-diurnal, diurnal, and long period, with solar and lunar contributions to each. Our present focus will be on long term variations in the mean square amplitude of the semi-diurnal constituent, with averaging over all the short period variations. For the solar tide that includes the day and year. For the lunar tide it includes the day, month, year, and the apsidal (8.85 year) and nodal (18.6 year) periods. We present calculations of the variations in radiative and tidal forcing for the past 3 million years. The two signals are quite similar. Both vary by ~1% of their respective mean values, are dominated by obliquity variations, and exhibit only secondary influence from orbital eccentricity.
Marini, Ida; Alessandri Bonetti, Giulio; Bortolotti, Francesco; Bartolucci, Maria Lavinia; Gatto, Maria Rosaria; Michelotti, Ambra
2015-06-01
It has been hypothesized that different plantar sensory inputs could influence the whole body posture and dental occlusion but there is a lack of evidence on this possible association. To investigate the effects of experimental insoles redistributing plantar pressure on body posture, mandibular kinematics and electromyographic (EMG) activity of masticatory muscles on healthy subjects. A pilot study was conducted on 19 healthy volunteers that wore custom-made insoles normalizing the plantar pressure distribution for 2 weeks. Body posture parameters were measured by means of an optoelectronic stereophotogrammetric analysis; mandibular kinematics was analyzed by means of gothic arch tracings; superficial EMG activity of head and neck muscles was performed. Measurements were carried out 10 days before the insertion of the insoles, immediately before the insertion, the day after, 7 and 14 days after, in four different exteroceptive conditions. The outcomes of the present study show that insoles do not modify significantly over time the parameters of body posture, SEMG activity of head and neck muscles and mandibular kinematics. In this pilot study the experimental insoles did not significantly influence the body posture, the mandibular kinematics and the activity of masticatory muscles during a 14-day follow up period. Copyright © 2015 Elsevier Ltd. All rights reserved.
NASA Astrophysics Data System (ADS)
Solvang Johansen, Stian; Steinsland, Ingelin; Engeland, Kolbjørn
2016-04-01
Running hydrological models with precipitation and temperature ensemble forcing to generate ensembles of streamflow is a commonly used method in operational hydrology. Evaluations of streamflow ensembles have however revealed that the ensembles are biased with respect to both mean and spread. Thus postprocessing of the ensembles is needed in order to improve the forecast skill. The aims of this study is (i) to to evaluate how postprocessing of streamflow ensembles works for Norwegian catchments within different hydrological regimes and to (ii) demonstrate how post processed streamflow ensembles are used operationally by a hydropower producer. These aims were achieved by postprocessing forecasted daily discharge for 10 lead-times for 20 catchments in Norway by using EPS forcing from ECMWF applied the semi-distributed HBV-model dividing each catchment into 10 elevation zones. Statkraft Energi uses forecasts from these catchments for scheduling hydropower production. The catchments represent different hydrological regimes. Some catchments have stable winter condition with winter low flow and a major flood event during spring or early summer caused by snow melting. Others has a more mixed snow-rain regime, often with a secondary flood season during autumn, and in the coastal areas, the stream flow is dominated by rain, and the main flood season is autumn and winter. For post processing, a Bayesian model averaging model (BMA) close to (Kleiber et al 2011) is used. The model creates a predictive PDF that is a weighted average of PDFs centered on the individual bias corrected forecasts. The weights are here equal since all ensemble members come from the same model, and thus have the same probability. For modeling streamflow, the gamma distribution is chosen as a predictive PDF. The bias correction parameters and the PDF parameters are estimated using a 30-day sliding window training period. Preliminary results show that the improvement varies between catchments depending on where they are situated and the hydrological regime. There is an improvement in CRPS for all catchments compared to raw EPS ensembles. The improvement is up to lead-time 5-7. The postprocessing also improves the MAE for the median of the predictive PDF compared to the median of the raw EPS. But less compared to CRPS, often up to lead-time 2-3. The streamflow ensembles are to some extent used operationally in Statkraft Energi (Hydro Power company, Norway), with respect to early warning, risk assessment and decision-making. Presently all forecast used operationally for short-term scheduling are deterministic, but ensembles are used visually for expert assessment of risk in difficult situations where e.g. there is a chance of overflow in a reservoir. However, there are plans to incorporate ensembles in the daily scheduling of hydropower production.
Effects of orthopedic insoles on static balance of older adults wearing thick socks.
Ma, Christina Zong-Hao; Wong, Duo Wai-Chi; Wan, Anson Hong-Ping; Lee, Winson Chiu-Chun
2018-06-01
The wearing of socks and insoles may affect the ability of the foot to detect tactile input influencing postural balance. The aim of this study was to investigate whether (1) thick socks adversely affected the elderly postural balance and (2) orthopedic insoles could improve the elderly postural balance while wearing thick socks. Repeated-measures study design. In total, 14 healthy older adults were recruited. A monofilament test was conducted to evaluate foot plantar sensation with and without thick socks. Subjects then performed the Romberg tests under three conditions: (1) barefoot, (2) with socks only, and (3) with both socks and insoles. Postural balance was assessed by measuring the center of pressure movement during standing in each experimental condition. Thick socks significantly decreased the monofilament score ( p < 0.001), suggesting reduction in ability to detect external forces. All center of pressure parameters increased significantly while wearing thick socks ( p < 0.017), implying reduction of postural stability. They then decreased significantly with the additional use of insoles ( p < 0.017). Previous studies have documented the changes in plantar pressure distribution with the use of orthopedic insoles. This study further suggests that such changes in contact mechanics could produce some balance-improving effects, which appears not to have been reported earlier. Clinical relevance Wearing thick socks reduces plantar pressure sensitivity and increases postural sway which may increase risk of falls. Orthopedic insoles and footwear with similar design could potentially be a cost-effective method in maintaining postural balance when wearing thick socks.
Arnold, John B; Wong, Daniel X; Jones, Richard K; Hill, Catherine L; Thewlis, Dominic
2016-07-01
Lateral wedge insoles are intended to reduce biomechanical risk factors of medial knee osteoarthritis (OA) progression, such as increased knee joint load; however, there has been no definitive consensus on this topic. The aim of this systematic review and meta-analysis was to establish the within-subject effects of lateral wedge insoles on knee joint load in people with medial knee OA during walking. Six databases were searched from inception until February 13, 2015. Included studies reported on the immediate biomechanical effects of lateral wedge insoles during walking in people with medial knee OA. Primary outcomes of interest relating to the biomechanical risk of disease progression were the first and second peak external knee adduction moment (EKAM) and knee adduction angular impulse (KAAI). Eligible studies were pooled using random-effects meta-analysis. Eighteen studies were included with a total of 534 participants. Lateral wedge insoles resulted in a small but statistically significant reduction in the first peak EKAM (standardized mean difference [SMD] -0.19; 95% confidence interval [95% CI] -0.23, -0.15) and second peak EKAM (SMD -0.25; 95% CI -0.32, -0.19) with a low level of heterogeneity (I(2) = 5% and 30%, respectively). There was a favorable but small reduction in the KAAI with lateral wedge insoles (SMD -0.14; 95% CI -0.21, -0.07, I(2) = 31%). Risk of methodologic bias scores (quality index) ranged from 8 to 13 out of 16. Lateral wedge insoles cause small reductions in the EKAM and KAAI during walking in people with medial knee OA. Current evidence demonstrates that lateral wedge insoles appear ineffective at attenuating structural changes in people with medial knee OA as a whole and may be better suited to targeted use in biomechanical phenotypes associated with larger reductions in knee load. © 2016, American College of Rheumatology.
Unlocking the climate riddle in forested ecosystems
Greg C. Liknes; Christopher W. Woodall; Brian F. Walters; Sara A. Goeking
2012-01-01
Climate information is often used as a predictor in ecological studies, where temporal averages are typically based on climate normals (30-year means) or seasonal averages. While ensemble projections of future climate forecast a higher global average annual temperature, they also predict increased climate variability. It remains to be seen whether forest ecosystems...
Evaluation of an Ensemble Dispersion Calculation.
NASA Astrophysics Data System (ADS)
Draxler, Roland R.
2003-02-01
A Lagrangian transport and dispersion model was modified to generate multiple simulations from a single meteorological dataset. Each member of the simulation was computed by assuming a ±1-gridpoint shift in the horizontal direction and a ±250-m shift in the vertical direction of the particle position, with respect to the meteorological data. The configuration resulted in 27 ensemble members. Each member was assumed to have an equal probability. The model was tested by creating an ensemble of daily average air concentrations for 3 months at 75 measurement locations over the eastern half of the United States during the Across North America Tracer Experiment (ANATEX). Two generic graphical displays were developed to summarize the ensemble prediction and the resulting concentration probabilities for a specific event: a probability-exceed plot and a concentration-probability plot. Although a cumulative distribution of the ensemble probabilities compared favorably with the measurement data, the resulting distribution was not uniform. This result was attributed to release height sensitivity. The trajectory ensemble approach accounts for about 41%-47% of the variance in the measurement data. This residual uncertainty is caused by other model and data errors that are not included in the ensemble design.
Shafizadeh-Moghadam, Hossein; Valavi, Roozbeh; Shahabi, Himan; Chapi, Kamran; Shirzadi, Ataollah
2018-07-01
In this research, eight individual machine learning and statistical models are implemented and compared, and based on their results, seven ensemble models for flood susceptibility assessment are introduced. The individual models included artificial neural networks, classification and regression trees, flexible discriminant analysis, generalized linear model, generalized additive model, boosted regression trees, multivariate adaptive regression splines, and maximum entropy, and the ensemble models were Ensemble Model committee averaging (EMca), Ensemble Model confidence interval Inferior (EMciInf), Ensemble Model confidence interval Superior (EMciSup), Ensemble Model to estimate the coefficient of variation (EMcv), Ensemble Model to estimate the mean (EMmean), Ensemble Model to estimate the median (EMmedian), and Ensemble Model based on weighted mean (EMwmean). The data set covered 201 flood events in the Haraz watershed (Mazandaran province in Iran) and 10,000 randomly selected non-occurrence points. Among the individual models, the Area Under the Receiver Operating Characteristic (AUROC), which showed the highest value, belonged to boosted regression trees (0.975) and the lowest value was recorded for generalized linear model (0.642). On the other hand, the proposed EMmedian resulted in the highest accuracy (0.976) among all models. In spite of the outstanding performance of some models, nevertheless, variability among the prediction of individual models was considerable. Therefore, to reduce uncertainty, creating more generalizable, more stable, and less sensitive models, ensemble forecasting approaches and in particular the EMmedian is recommended for flood susceptibility assessment. Copyright © 2018 Elsevier Ltd. All rights reserved.
Analysis of AC and DC Lighting Systems with 150-Watt Peak Solar Panel in Denpasar Based on NASA Data
NASA Astrophysics Data System (ADS)
Narottama, A. A. N. M.; Amerta Yasa, K.; Suwardana, I. W.; Sapteka, A. A. N. G.; Priambodo, P. S.
2018-01-01
Solar energy on the Earth’s surface has different magnitudes on every longitude and latitude. National Aeronautics and Space Administration (NASA) provides surface meteorology and solar energy database which can be accessed openly online. This database delivers information about Monthly Averaged Insolation Incident On A Horizontal Surface, Monthly Averaged Insolation Incident On A Horizontal Surface At Indicated GMT Times and also data about Equivalent Number Of No-Sun Or Black Days for any latitude and longitude. Therefore, we investigate the lighting systems with 150-Watt peak solar panel in Denpasar City, the capital province of Bali. Based on NASA data, we analyse the received wattage by a unit of 150-Watt peak solar panel in Denpasar City and the sustainability of 150-Watt peak solar panel to supply energy for 432-Watt hour/day AC and 360-Watt hour/day DC lighting systems using 1.2 kWh battery. The result shows that the maximum received wattage by a unit of 150-Watt peak solar panel is 0.76 kW/day in October. We concluded that the 1.2 kWh installed battery has higher capacity than the battery capacity needed in March, the month with highest no-sun days, for both AC and DC lighting systems. We calculate that the installed battery can be used to store the sustainable energy from sun needed by AC and DC lighting system for about 2.78 days and 3.51 days, consecutively.
Using Bayes Model Averaging for Wind Power Forecasts
NASA Astrophysics Data System (ADS)
Preede Revheim, Pål; Beyer, Hans Georg
2014-05-01
For operational purposes predictions of the forecasts of the lumped output of groups of wind farms spread over larger geographic areas will often be of interest. A naive approach is to make forecasts for each individual site and sum them up to get the group forecast. It is however well documented that a better choice is to use a model that also takes advantage of spatial smoothing effects. It might however be the case that some sites tends to more accurately reflect the total output of the region, either in general or for certain wind directions. It will then be of interest giving these a greater influence over the group forecast. Bayesian model averaging (BMA) is a statistical post-processing method for producing probabilistic forecasts from ensembles. Raftery et al. [1] show how BMA can be used for statistical post processing of forecast ensembles, producing PDFs of future weather quantities. The BMA predictive PDF of a future weather quantity is a weighted average of the ensemble members' PDFs, where the weights can be interpreted as posterior probabilities and reflect the ensemble members' contribution to overall forecasting skill over a training period. In Revheim and Beyer [2] the BMA procedure used in Sloughter, Gneiting and Raftery [3] were found to produce fairly accurate PDFs for the future mean wind speed of a group of sites from the single sites wind speeds. However, when the procedure was attempted applied to wind power it resulted in either problems with the estimation of the parameters (mainly caused by longer consecutive periods of no power production) or severe underestimation (mainly caused by problems with reflecting the power curve). In this paper the problems that arose when applying BMA to wind power forecasting is met through two strategies. First, the BMA procedure is run with a combination of single site wind speeds and single site wind power production as input. This solves the problem with longer consecutive periods where the input data does not contain information, but it has the disadvantage of nearly doubling the number of model parameters to be estimated. Second, the BMA procedure is run with group mean wind power as the response variable instead of group mean wind speed. This also solves the problem with longer consecutive periods without information in the input data, but it leaves the power curve to also be estimated from the data. [1] Raftery, A. E., et al. (2005). Using Bayesian Model Averaging to Calibrate Forecast Ensembles. Monthly Weather Review, 133, 1155-1174. [2]Revheim, P. P. and H. G. Beyer (2013). Using Bayesian Model Averaging for wind farm group forecasts. EWEA Wind Power Forecasting Technology Workshop,Rotterdam, 4-5 December 2013. [3]Sloughter, J. M., T. Gneiting and A. E. Raftery (2010). Probabilistic Wind Speed Forecasting Using Ensembles and Bayesian Model Averaging. Journal of the American Statistical Association, Vol. 105, No. 489, 25-35
The interplay between cooperativity and diversity in model threshold ensembles
Cervera, Javier; Manzanares, José A.; Mafe, Salvador
2014-01-01
The interplay between cooperativity and diversity is crucial for biological ensembles because single molecule experiments show a significant degree of heterogeneity and also for artificial nanostructures because of the high individual variability characteristic of nanoscale units. We study the cross-effects between cooperativity and diversity in model threshold ensembles composed of individually different units that show a cooperative behaviour. The units are modelled as statistical distributions of parameters (the individual threshold potentials here) characterized by central and width distribution values. The simulations show that the interplay between cooperativity and diversity results in ensemble-averaged responses of interest for the understanding of electrical transduction in cell membranes, the experimental characterization of heterogeneous groups of biomolecules and the development of biologically inspired engineering designs with individually different building blocks. PMID:25142516
Sampling-based ensemble segmentation against inter-operator variability
NASA Astrophysics Data System (ADS)
Huo, Jing; Okada, Kazunori; Pope, Whitney; Brown, Matthew
2011-03-01
Inconsistency and a lack of reproducibility are commonly associated with semi-automated segmentation methods. In this study, we developed an ensemble approach to improve reproducibility and applied it to glioblastoma multiforme (GBM) brain tumor segmentation on T1-weigted contrast enhanced MR volumes. The proposed approach combines samplingbased simulations and ensemble segmentation into a single framework; it generates a set of segmentations by perturbing user initialization and user-specified internal parameters, then fuses the set of segmentations into a single consensus result. Three combination algorithms were applied: majority voting, averaging and expectation-maximization (EM). The reproducibility of the proposed framework was evaluated by a controlled experiment on 16 tumor cases from a multicenter drug trial. The ensemble framework had significantly better reproducibility than the individual base Otsu thresholding method (p<.001).
NASA Astrophysics Data System (ADS)
Taniguchi, Kenji
2018-04-01
To investigate future variations in high-impact weather events, numerous samples are required. For the detailed assessment in a specific region, a high spatial resolution is also required. A simple ensemble simulation technique is proposed in this paper. In the proposed technique, new ensemble members were generated from one basic state vector and two perturbation vectors, which were obtained by lagged average forecasting simulations. Sensitivity experiments with different numbers of ensemble members, different simulation lengths, and different perturbation magnitudes were performed. Experimental application to a global warming study was also implemented for a typhoon event. Ensemble-mean results and ensemble spreads of total precipitation, atmospheric conditions showed similar characteristics across the sensitivity experiments. The frequencies of the maximum total and hourly precipitation also showed similar distributions. These results indicate the robustness of the proposed technique. On the other hand, considerable ensemble spread was found in each ensemble experiment. In addition, the results of the application to a global warming study showed possible variations in the future. These results indicate that the proposed technique is useful for investigating various meteorological phenomena and the impacts of global warming. The results of the ensemble simulations also enable the stochastic evaluation of differences in high-impact weather events. In addition, the impacts of a spectral nudging technique were also examined. The tracks of a typhoon were quite different between cases with and without spectral nudging; however, the ranges of the tracks among ensemble members were comparable. It indicates that spectral nudging does not necessarily suppress ensemble spread.
ASHMET: A computer code for estimating insolation incident on tilted surfaces
NASA Technical Reports Server (NTRS)
Elkin, R. F.; Toelle, R. G.
1980-01-01
A computer code, ASHMET, was developed by MSFC to estimate the amount of solar insolation incident on the surfaces of solar collectors. Both tracking and fixed-position collectors were included. Climatological data for 248 U. S. locations are built into the code. The basic methodology used by ASHMET is the ASHRAE clear-day insolation relationships modified by a clearness index derived from SOLMET-measured solar radiation data to a horizontal surface.
Novel methodology to obtain salient biomechanical characteristics of insole materials.
Lavery, L A; Vela, S A; Ashry, H R; Lanctot, D R; Athanasiou, K A
1997-06-01
Viscoelastic inserts are commonly used as artificial shock absorbers to prevent neuropathic foot ulcerations by decreasing pressure on the sole of the foot. Unfortunately, there is little scientific information available to guide physicians in the selection of appropriate insole materials. Therefore, a novel methodology was developed to form a rational platform for biomechanical characterizations of insole material durability, which consisted of in vivo gait analysis and in vitro bioengineering measurements. Results show significant differences in the compressive stiffness of the tested insoles and the rate of change over time in both compressive stiffness and peak pressures measured. Good correlations were found between pressure-time integral and Young's modulus (r2 = 0.93), and total energy applied and Young's modulus (r2 = 0.87).
Cervera, Javier; Manzanares, José A; Mafe, Salvador
2018-04-04
Genetic networks operate in the presence of local heterogeneities in single-cell transcription and translation rates. Bioelectrical networks and spatio-temporal maps of cell electric potentials can influence multicellular ensembles. Could cell-cell bioelectrical interactions mediated by intercellular gap junctions contribute to the stabilization of multicellular states against local genetic heterogeneities? We theoretically analyze this question on the basis of two well-established experimental facts: (i) the membrane potential is a reliable read-out of the single-cell electrical state and (ii) when the cells are coupled together, their individual cell potentials can be influenced by ensemble-averaged electrical potentials. We propose a minimal biophysical model for the coupling between genetic and bioelectrical networks that associates the local changes occurring in the transcription and translation rates of an ion channel protein with abnormally low (depolarized) cell potentials. We then analyze the conditions under which the depolarization of a small region (patch) in a multicellular ensemble can be reverted by its bioelectrical coupling with the (normally polarized) neighboring cells. We show also that the coupling between genetic and bioelectric networks of non-excitable cells, modulated by average electric potentials at the multicellular ensemble level, can produce oscillatory phenomena. The simulations show the importance of single-cell potentials characteristic of polarized and depolarized states, the relative sizes of the abnormally polarized patch and the rest of the normally polarized ensemble, and intercellular coupling.
NASA Technical Reports Server (NTRS)
Taylor, Patrick C.; Baker, Noel C.
2015-01-01
Earth's climate is changing and will continue to change into the foreseeable future. Expected changes in the climatological distribution of precipitation, surface temperature, and surface solar radiation will significantly impact agriculture. Adaptation strategies are, therefore, required to reduce the agricultural impacts of climate change. Climate change projections of precipitation, surface temperature, and surface solar radiation distributions are necessary input for adaption planning studies. These projections are conventionally constructed from an ensemble of climate model simulations (e.g., the Coupled Model Intercomparison Project 5 (CMIP5)) as an equal weighted average, one model one vote. Each climate model, however, represents the array of climate-relevant physical processes with varying degrees of fidelity influencing the projection of individual climate variables differently. Presented here is a new approach, termed the "Intelligent Ensemble, that constructs climate variable projections by weighting each model according to its ability to represent key physical processes, e.g., precipitation probability distribution. This approach provides added value over the equal weighted average method. Physical process metrics applied in the "Intelligent Ensemble" method are created using a combination of NASA and NOAA satellite and surface-based cloud, radiation, temperature, and precipitation data sets. The "Intelligent Ensemble" method is applied to the RCP4.5 and RCP8.5 anthropogenic climate forcing simulations within the CMIP5 archive to develop a set of climate change scenarios for precipitation, temperature, and surface solar radiation in each USDA Farm Resource Region for use in climate change adaptation studies.
A short-term ensemble wind speed forecasting system for wind power applications
NASA Astrophysics Data System (ADS)
Baidya Roy, S.; Traiteur, J. J.; Callicutt, D.; Smith, M.
2011-12-01
This study develops an adaptive, blended forecasting system to provide accurate wind speed forecasts 1 hour ahead of time for wind power applications. The system consists of an ensemble of 21 forecasts with different configurations of the Weather Research and Forecasting Single Column Model (WRFSCM) and a persistence model. The ensemble is calibrated against observations for a 2 month period (June-July, 2008) at a potential wind farm site in Illinois using the Bayesian Model Averaging (BMA) technique. The forecasting system is evaluated against observations for August 2008 at the same site. The calibrated ensemble forecasts significantly outperform the forecasts from the uncalibrated ensemble while significantly reducing forecast uncertainty under all environmental stability conditions. The system also generates significantly better forecasts than persistence, autoregressive (AR) and autoregressive moving average (ARMA) models during the morning transition and the diurnal convective regimes. This forecasting system is computationally more efficient than traditional numerical weather prediction models and can generate a calibrated forecast, including model runs and calibration, in approximately 1 minute. Currently, hour-ahead wind speed forecasts are almost exclusively produced using statistical models. However, numerical models have several distinct advantages over statistical models including the potential to provide turbulence forecasts. Hence, there is an urgent need to explore the role of numerical models in short-term wind speed forecasting. This work is a step in that direction and is likely to trigger a debate within the wind speed forecasting community.
Fidelity decay in interacting two-level boson systems: Freezing and revivals
NASA Astrophysics Data System (ADS)
Benet, Luis; Hernández-Quiroz, Saúl; Seligman, Thomas H.
2011-05-01
We study the fidelity decay in the k-body embedded ensembles of random matrices for bosons distributed in two single-particle states, considering the reference or unperturbed Hamiltonian as the one-body terms and the diagonal part of the k-body embedded ensemble of random matrices and the perturbation as the residual off-diagonal part of the interaction. We calculate the ensemble-averaged fidelity with respect to an initial random state within linear response theory to second order on the perturbation strength and demonstrate that it displays the freeze of the fidelity. During the freeze, the average fidelity exhibits periodic revivals at integer values of the Heisenberg time tH. By selecting specific k-body terms of the residual interaction, we find that the periodicity of the revivals during the freeze of fidelity is an integer fraction of tH, thus relating the period of the revivals with the range of the interaction k of the perturbing terms. Numerical calculations confirm the analytical results.
High northern latitude temperature extremes, 1400-1999
NASA Astrophysics Data System (ADS)
Tingley, M. P.; Huybers, P.; Hughen, K. A.
2009-12-01
There is often an interest in determining which interval features the most extreme value of a reconstructed climate field, such as the warmest year or decade in a temperature reconstruction. Previous approaches to this type of question have not fully accounted for the spatial and temporal covariance in the climate field when assessing the significance of extreme values. Here we present results from applying BARSAT, a new, Bayesian approach to reconstructing climate fields, to a 600 year multiproxy temperature data set that covers land areas between 45N and 85N. The end result of the analysis is an ensemble of spatially and temporally complete realizations of the temperature field, each of which is consistent with the observations and the estimated values of the parameters that define the assumed spatial and temporal covariance functions. In terms of the spatial average temperature, 1990-1999 was the warmest decade in the 1400-1999 interval in each of 2000 ensemble members, while 1995 was the warmest year in 98% of the ensemble members. A similar analysis at each node of a regular 5 degree grid gives insight into the spatial distribution of warm temperatures, and reveals that 1995 was anomalously warm in Eurasia, whereas 1998 featured extreme warmth in North America. In 70% of the ensemble members, 1601 featured the coldest spatial average, indicating that the eruption of Huaynaputina in Peru in 1600 (with a volcanic explosivity index of 6) had a major cooling impact on the high northern latitudes. Repeating this analysis at each node reveals the varying impacts of major volcanic eruptions on the distribution of extreme cooling. Finally, we use the ensemble to investigate extremes in the time evolution of centennial temperature trends, and find that in more than half the ensemble members, the greatest rate of change in the spatial mean time series was a cooling centered at 1600. The largest rate of centennial scale warming, however, occurred in the 20th Century in more than 98% of the ensemble members.
NASA Astrophysics Data System (ADS)
Shen, Feifei; Xu, Dongmei; Xue, Ming; Min, Jinzhong
2017-07-01
This study examines the impacts of assimilating radar radial velocity (Vr) data for the simulation of hurricane Ike (2008) with two different ensemble generation techniques in the framework of the hybrid ensemble-variational (EnVar) data assimilation system of Weather Research and Forecasting model. For the generation of ensemble perturbations we apply two techniques, the ensemble transform Kalman filter (ETKF) and the ensemble of data assimilation (EDA). For the ETKF-EnVar, the forecast ensemble perturbations are updated by the ETKF, while for the EDA-EnVar, the hybrid is employed to update each ensemble member with perturbed observations. The ensemble mean is analyzed by the hybrid method with flow-dependent ensemble covariance for both EnVar. The sensitivity of analyses and forecasts to the two applied ensemble generation techniques is investigated in our current study. It is found that the EnVar system is rather stable with different ensemble update techniques in terms of its skill on improving the analyses and forecasts. The EDA-EnVar-based ensemble perturbations are likely to include slightly less organized spatial structures than those in ETKF-EnVar, and the perturbations of the latter are constructed more dynamically. Detailed diagnostics reveal that both of the EnVar schemes not only produce positive temperature increments around the hurricane center but also systematically adjust the hurricane location with the hurricane-specific error covariance. On average, the analysis and forecast from the ETKF-EnVar have slightly smaller errors than that from the EDA-EnVar in terms of track, intensity, and precipitation forecast. Moreover, ETKF-EnVar yields better forecasts when verified against conventional observations.
NASA Technical Reports Server (NTRS)
Petit, Gerard; Thomas, Claudine; Tavella, Patrizia
1993-01-01
Millisecond pulsars are galactic objects that exhibit a very stable spinning period. Several tens of these celestial clocks have now been discovered, which opens the possibility that an average time scale may be deduced through a long-term stability algorithm. Such an ensemble average makes it possible to reduce the level of the instabilities originating from the pulsars or from other sources of noise, which are unknown but independent. The basis for such an algorithm is presented and applied to real pulsar data. It is shown that pulsar time could shortly become more stable than the present atomic time, for averaging times of a few years. Pulsar time can also be used as a flywheel to maintain the accuracy of atomic time in case of temporary failure of the primary standards, or to transfer the improved accuracy of future standards back to the present.
Hierarchical encoding makes individuals in a group seem more attractive.
Walker, Drew; Vul, Edward
2014-01-01
In the research reported here, we found evidence of the cheerleader effect-people seem more attractive in a group than in isolation. We propose that this effect arises via an interplay of three cognitive phenomena: (a) The visual system automatically computes ensemble representations of faces presented in a group, (b) individual members of the group are biased toward this ensemble average, and (c) average faces are attractive. Taken together, these phenomena suggest that individual faces will seem more attractive when presented in a group because they will appear more similar to the average group face, which is more attractive than group members' individual faces. We tested this hypothesis in five experiments in which subjects rated the attractiveness of faces presented either alone or in a group with the same gender. Our results were consistent with the cheerleader effect.
Bennell, Kim; Bowles, Kelly-Ann; Payne, Craig; Cicuttini, Flavia; Osborne, Richard; Harris, Anthony; Hinman, Rana
2007-01-01
Background Whilst laterally wedged insoles, worn inside the shoes, are advocated as a simple, inexpensive, non-toxic self-administered intervention for knee osteoarthritis (OA), there is currently limited evidence to support their use. The aim of this randomised, double-blind controlled trial is to determine whether laterally wedges insoles lead to greater improvements in knee pain, physical function and health-related quality of life, and slower structural disease progression as well as being more cost-effective, than control flat insoles in people with medial knee OA. Methods/Design Two hundred participants with painful radiographic medial knee OA and varus malalignment will be recruited from the community and randomly allocated to lateral wedge or control insole groups using concealed allocation. Participants will be blinded as to which insole is considered therapeutic. Blinded follow up assessment will be conducted at 12 months after randomisation. The outcome measures are valid and reliable measures recommended for OA clinical trials. Questionnaires will assess changes in pain, physical function and health-related quality-of-life. Magnetic resonance imaging will measure changes in tibial cartilage volume. To evaluate cost-effectiveness, participants will record the use of all health-related treatments in a log-book returned to the assessor on a monthly basis. To test the effect of the intervention using an intention-to-treat analysis, linear regression modelling will be applied adjusting for baseline outcome values and other demographic characteristics. Discussion Results from this trial will contribute to the evidence regarding the effectiveness of laterally wedged insoles for the management of medial knee OA. Trial registration ACTR12605000503628; NCT00415259. PMID:17892539
NASA Technical Reports Server (NTRS)
Li, Zhanqing; Whitlock, Charles H.; Charlock, Thomas P.
1995-01-01
Global sets of surface radiation budget (SRB) have been obtained from satellite programs. These satellite-based estimates need validation with ground-truth observations. This study validates the estimates of monthly mean surface insolation contained in two satellite-based SRB datasets with the surface measurements made at worldwide radiation stations from the Global Energy Balance Archive (GEBA). One dataset was developed from the Earth Radiation Budget Experiment (ERBE) using the algorithm of Li et al. (ERBE/SRB), and the other from the International Satellite Cloud Climatology Project (ISCCP) using the algorithm of Pinker and Laszlo and that of Staylor (GEWEX/SRB). Since the ERBE/SRB data contain the surface net solar radiation only, the values of surface insolation were derived by making use of the surface albedo data contained GEWEX/SRB product. The resulting surface insolation has a bias error near zero and a root-mean-square error (RMSE) between 8 and 28 W/sq m. The RMSE is mainly associated with poor representation of surface observations within a grid cell. When the number of surface observations are sufficient, the random error is estimated to be about 5 W/sq m with present satellite-based estimates. In addition to demonstrating the strength of the retrieving method, the small random error demonstrates how well the ERBE derives from the monthly mean fluxes at the top of the atmosphere (TOA). A larger scatter is found for the comparison of transmissivity than for that of insolation. Month to month comparison of insolation reveals a weak seasonal trend in bias error with an amplitude of about 3 W/sq m. As for the insolation data from the GEWEX/SRB, larger bias errors of 5-10 W/sq m are evident with stronger seasonal trends and almost identical RMSEs.
Ensembles of physical states and random quantum circuits on graphs
NASA Astrophysics Data System (ADS)
Hamma, Alioscia; Santra, Siddhartha; Zanardi, Paolo
2012-11-01
In this paper we continue and extend the investigations of the ensembles of random physical states introduced in Hamma [Phys. Rev. Lett.PRLTAO0031-900710.1103/PhysRevLett.109.040502 109, 040502 (2012)]. These ensembles are constructed by finite-length random quantum circuits (RQC) acting on the (hyper)edges of an underlying (hyper)graph structure. The latter encodes for the locality structure associated with finite-time quantum evolutions generated by physical, i.e., local, Hamiltonians. Our goal is to analyze physical properties of typical states in these ensembles; in particular here we focus on proxies of quantum entanglement as purity and α-Renyi entropies. The problem is formulated in terms of matrix elements of superoperators which depend on the graph structure, choice of probability measure over the local unitaries, and circuit length. In the α=2 case these superoperators act on a restricted multiqubit space generated by permutation operators associated to the subsets of vertices of the graph. For permutationally invariant interactions the dynamics can be further restricted to an exponentially smaller subspace. We consider different families of RQCs and study their typical entanglement properties for finite time as well as their asymptotic behavior. We find that area law holds in average and that the volume law is a typical property (that is, it holds in average and the fluctuations around the average are vanishing for the large system) of physical states. The area law arises when the evolution time is O(1) with respect to the size L of the system, while the volume law arises as is typical when the evolution time scales like O(L).
The Dropout Learning Algorithm
Baldi, Pierre; Sadowski, Peter
2014-01-01
Dropout is a recently introduced algorithm for training neural network by randomly dropping units during training to prevent their co-adaptation. A mathematical analysis of some of the static and dynamic properties of dropout is provided using Bernoulli gating variables, general enough to accommodate dropout on units or connections, and with variable rates. The framework allows a complete analysis of the ensemble averaging properties of dropout in linear networks, which is useful to understand the non-linear case. The ensemble averaging properties of dropout in non-linear logistic networks result from three fundamental equations: (1) the approximation of the expectations of logistic functions by normalized geometric means, for which bounds and estimates are derived; (2) the algebraic equality between normalized geometric means of logistic functions with the logistic of the means, which mathematically characterizes logistic functions; and (3) the linearity of the means with respect to sums, as well as products of independent variables. The results are also extended to other classes of transfer functions, including rectified linear functions. Approximation errors tend to cancel each other and do not accumulate. Dropout can also be connected to stochastic neurons and used to predict firing rates, and to backpropagation by viewing the backward propagation as ensemble averaging in a dropout linear network. Moreover, the convergence properties of dropout can be understood in terms of stochastic gradient descent. Finally, for the regularization properties of dropout, the expectation of the dropout gradient is the gradient of the corresponding approximation ensemble, regularized by an adaptive weight decay term with a propensity for self-consistent variance minimization and sparse representations. PMID:24771879
NASA Astrophysics Data System (ADS)
Beckman, Robert A.; Moreland, David; Louise-May, Shirley; Humblet, Christine
2006-05-01
Nuclear magnetic resonance (NMR) provides structural and dynamic information reflecting an average, often non-linear, of multiple solution-state conformations. Therefore, a single optimized structure derived from NMR refinement may be misleading if the NMR data actually result from averaging of distinct conformers. It is hypothesized that a conformational ensemble generated by a valid molecular dynamics (MD) simulation should be able to improve agreement with the NMR data set compared with the single optimized starting structure. Using a model system consisting of two sequence-related self-complementary ribonucleotide octamers for which NMR data was available, 0.3 ns particle mesh Ewald MD simulations were performed in the AMBER force field in the presence of explicit water and counterions. Agreement of the averaged properties of the molecular dynamics ensembles with NMR data such as homonuclear proton nuclear Overhauser effect (NOE)-based distance constraints, homonuclear proton and heteronuclear 1H-31P coupling constant ( J) data, and qualitative NMR information on hydrogen bond occupancy, was systematically assessed. Despite the short length of the simulation, the ensemble generated from it agreed with the NMR experimental constraints more completely than the single optimized NMR structure. This suggests that short unrestrained MD simulations may be of utility in interpreting NMR results. As expected, a 0.5 ns simulation utilizing a distance dependent dielectric did not improve agreement with the NMR data, consistent with its inferior exploration of conformational space as assessed by 2-D RMSD plots. Thus, ability to rapidly improve agreement with NMR constraints may be a sensitive diagnostic of the MD methods themselves.
Yucel, Ufuk; Kucuksen, Sami; Cingoz, Havva T; Anliacik, Emel; Ozbek, Orhan; Salli, Ali; Ugurlu, Hatice
2013-12-01
Plantar fasciitis often leads to disability. Optimal treatment for this clinical condition is still unknown. To compare the effectiveness of wearing a full-length silicone insole with ultrasound-guided corticosteroid injection in the management of plantar fasciitis. Randomized clinical trial. Forty-two patients with chronic unilateral plantar fasciitis were allocated randomly to have an ultrasound-guided corticosteroid injection or wear a full-length silicone insole. Data were collected before the procedure and 1 month after. The primary outcome measures included first-step heel pain via Visual Analogue Scale and Heel Tenderness Index. Other outcome measures were the Foot and Ankle Outcome Score and ultrasonographic thickness of the plantar fascia. After 1 month, a significant improvement was shown in Visual Analogue Scale, Heel Tenderness Index, Foot and Ankle Outcome Score, and ultrasonographic thickness of plantar fascia in both groups. Visual Analogue Scale scores, Foot and Ankle Outcome Score pain, Foot and Ankle Outcome Score for activities of daily living, Foot and Ankle Outcome Score for sport and recreation function, and plantar fascia thickness were better in injection group than in insole group (p < 0.05). Although both ultrasound-guided corticosteroid injection and wearing a full-length silicone insole were effective in the conservative treatment of plantar fasciitis, we recommend the use of silicone insoles as a first line of treatment for persons with plantar fasciitis.
Does Wearing Textured Insoles during Non-class Time Improve Proprioception in Professional Dancers?
Steinberg, N; Tirosh, O; Adams, R; Karin, J; Waddington, G
2015-11-01
This study sought to determine whether textured insoles inserted in the sports shoes of young dancers improved their inversion and eversion ankle movement discrimination. 26 ballet dancers (14 female, 12 male) from the Australian Ballet School, ages 14-19 years, were divided into 2 groups according to sex and class levels. During the first 4 weeks, the first intervention group (GRP1) was asked to wear textured insoles in their sports shoes during non-class periods, and the second intervention group (GRP2) followed standard practice. In the next 4 weeks, GRP2 was asked to wear the textured insoles and GRP1 did not wear the textured insoles. Participants were tested pre-intervention, after 4 weeks, and at 8 weeks for both inversion and eversion ankle discrimination. In both inversion and eversion testing positions, interaction was found between the 2 groups and the 3 testing times (p<0.001), with significant differences between the first testing and the second testing (p=0.038 and p=0.019, respectively), and between the third testing and the second testing (p=0.003 and p=0.029, respectively). In conclusion, the stimulation to the proprioceptive system arising from textured insoles worn for 4 weeks was sufficient to improve the ankle proprioception of ballet dancers, in both inversion and eversion movements. © Georg Thieme Verlag KG Stuttgart · New York.
NASA Astrophysics Data System (ADS)
Tamkin, G.; Schnase, J. L.; Duffy, D.; Li, J.; Strong, S.; Thompson, J. H.
2017-12-01
NASA's efforts to advance climate analytics-as-a-service are making new capabilities available to the research community: (1) A full-featured Reanalysis Ensemble Service (RES) comprising monthly means data from multiple reanalysis data sets, accessible through an enhanced set of extraction, analytic, arithmetic, and intercomparison operations. The operations are made accessible through NASA's climate data analytics Web services and our client-side Climate Data Services Python library, CDSlib; (2) A cloud-based, high-performance Virtual Real-Time Analytics Testbed supporting a select set of climate variables. This near real-time capability enables advanced technologies like Spark and Hadoop-based MapReduce analytics over native NetCDF files; and (3) A WPS-compliant Web service interface to our climate data analytics service that will enable greater interoperability with next-generation systems such as ESGF. The Reanalysis Ensemble Service includes the following: - New API that supports full temporal, spatial, and grid-based resolution services with sample queries - A Docker-ready RES application to deploy across platforms - Extended capabilities that enable single- and multiple reanalysis area average, vertical average, re-gridding, standard deviation, and ensemble averages - Convenient, one-stop shopping for commonly used data products from multiple reanalyses including basic sub-setting and arithmetic operations (e.g., avg, sum, max, min, var, count, anomaly) - Full support for the MERRA-2 reanalysis dataset in addition to, ECMWF ERA-Interim, NCEP CFSR, JMA JRA-55 and NOAA/ESRL 20CR… - A Jupyter notebook-based distribution mechanism designed for client use cases that combines CDSlib documentation with interactive scenarios and personalized project management - Supporting analytic services for NASA GMAO Forward Processing datasets - Basic uncertainty quantification services that combine heterogeneous ensemble products with comparative observational products (e.g., reanalysis, observational, visualization) - The ability to compute and visualize multiple reanalysis for ease of inter-comparisons - Automated tools to retrieve and prepare data collections for analytic processing
Using simulation to interpret experimental data in terms of protein conformational ensembles.
Allison, Jane R
2017-04-01
In their biological environment, proteins are dynamic molecules, necessitating an ensemble structural description. Molecular dynamics simulations and solution-state experiments provide complimentary information in the form of atomically detailed coordinates and averaged or distributions of structural properties or related quantities. Recently, increases in the temporal and spatial scale of conformational sampling and comparison of the more diverse conformational ensembles thus generated have revealed the importance of sampling rare events. Excitingly, new methods based on maximum entropy and Bayesian inference are promising to provide a statistically sound mechanism for combining experimental data with molecular dynamics simulations. Copyright © 2016 Elsevier Ltd. All rights reserved.
NASA Astrophysics Data System (ADS)
Hafiz Burhan, Mohd; Nor, Nik Hisyamudin Muhd; Yarwindran, Mogan; Ibrahim, Mustaffa; Fahrul Hassan, Mohd; Azwir Azlan, Mohd; Turan, Faiz Mohd; Johan, Kartina
2017-08-01
Healthcare and medical is one of the most expensive field in the modern world. In order to fulfil medical requirement, this study aimed to design an orthotic insole by using Kinect Xbox Gaming Sensor Scanner and CAE softwares. The accuracy of the Kinect® XBOX 360 gaming sensor is capable of producing 3D reconstructed geometry with the maximum and minimum error of 3.78% (2.78mm) and 1.74% (0.46mm) respectively. The orthotic insole design process had been done by using Autodesk Meshmixer 2.6 and Solidworks 2014 software. Functionality of the orthotic insole designed was capable of reducing foot pressure especially in the metatarsal area. Overall, the proposed method was proved to be highly potential in the design of the insole where it promises low cost, less time consuming, and efficiency in regards that the Kinect® XBOX 360 device promised low price compared to other digital 3D scanner since the software needed to run the device can be downloaded for free.
Helms Tillery, S I; Taylor, D M; Schwartz, A B
2003-01-01
We have recently developed a closed-loop environment in which we can test the ability of primates to control the motion of a virtual device using ensembles of simultaneously recorded neurons /29/. Here we use a maximum likelihood method to assess the information about task performance contained in the neuronal ensemble. We trained two animals to control the motion of a computer cursor in three dimensions. Initially the animals controlled cursor motion using arm movements, but eventually they learned to drive the cursor directly from cortical activity. Using a population vector (PV) based upon the relation between cortical activity and arm motion, the animals were able to control the cursor directly from the brain in a closed-loop environment, but with difficulty. We added a supervised learning method that modified the parameters of the PV according to task performance (adaptive PV), and found that animals were able to exert much finer control over the cursor motion from brain signals. Here we describe a maximum likelihood method (ML) to assess the information about target contained in neuronal ensemble activity. Using this method, we compared the information about target contained in the ensemble during arm control, during brain control early in the adaptive PV, and during brain control after the adaptive PV had settled and the animal could drive the cursor reliably and with fine gradations. During the arm-control task, the ML was able to determine the target of the movement in as few as 10% of the trials, and as many as 75% of the trials, with an average of 65%. This average dropped when the animals used a population vector to control motion of the cursor. On average we could determine the target in around 35% of the trials. This low percentage was also reflected in poor control of the cursor, so that the animal was unable to reach the target in a large percentage of trials. Supervised adjustment of the population vector parameters produced new weighting coefficients and directional tuning parameters for many neurons. This produced a much better performance of the brain-controlled cursor motion. It was also reflected in the maximum likelihood measure of cell activity, producing the correct target based only on neuronal activity in over 80% of the trials on average. The changes in maximum likelihood estimates of target location based on ensemble firing show that an animal's ability to regulate the motion of a cortically controlled device is not crucially dependent on the experimenter's ability to estimate intention from neuronal activity.
Upgrades to the REA method for producing probabilistic climate change projections
NASA Astrophysics Data System (ADS)
Xu, Ying; Gao, Xuejie; Giorgi, Filippo
2010-05-01
We present an augmented version of the Reliability Ensemble Averaging (REA) method designed to generate probabilistic climate change information from ensembles of climate model simulations. Compared to the original version, the augmented one includes consideration of multiple variables and statistics in the calculation of the performance-based weights. In addition, the model convergence criterion previously employed is removed. The method is applied to the calculation of changes in mean and variability for temperature and precipitation over different sub-regions of East Asia based on the recently completed CMIP3 multi-model ensemble. Comparison of the new and old REA methods, along with the simple averaging procedure, and the use of different combinations of performance metrics shows that at fine sub-regional scales the choice of weighting is relevant. This is mostly because the models show a substantial spread in performance for the simulation of precipitation statistics, a result that supports the use of model weighting as a useful option to account for wide ranges of quality of models. The REA method, and in particular the upgraded one, provides a simple and flexible framework for assessing the uncertainty related to the aggregation of results from ensembles of models in order to produce climate change information at the regional scale. KEY WORDS: REA method, Climate change, CMIP3
Observing the conformation of individual SNARE proteins inside live cells
NASA Astrophysics Data System (ADS)
Weninger, Keith
2010-10-01
Protein conformational dynamics are directly linked to function in many instances. Within living cells, protein dynamics are rarely synchronized so observing ensemble-averaged behaviors can hide details of signaling pathways. Here we present an approach using single molecule fluorescence resonance energy transfer (FRET) to observe the conformation of individual SNARE proteins as they fold to enter the SNARE complex in living cells. Proteins were recombinantly expressed, labeled with small-molecule fluorescent dyes and microinjected for in vivo imaging and tracking using total internal reflection microscopy. Observing single molecules avoids the difficulties of averaging over unsynchronized ensembles. Our approach is easily generalized to a wide variety of proteins in many cellular signaling pathways.
Impact of distributions on the archetypes and prototypes in heterogeneous nanoparticle ensembles.
Fernandez, Michael; Wilson, Hugh F; Barnard, Amanda S
2017-01-05
The magnitude and complexity of the structural and functional data available on nanomaterials requires data analytics, statistical analysis and information technology to drive discovery. We demonstrate that multivariate statistical analysis can recognise the sets of truly significant nanostructures and their most relevant properties in heterogeneous ensembles with different probability distributions. The prototypical and archetypal nanostructures of five virtual ensembles of Si quantum dots (SiQDs) with Boltzmann, frequency, normal, Poisson and random distributions are identified using clustering and archetypal analysis, where we find that their diversity is defined by size and shape, regardless of the type of distribution. At the complex hull of the SiQD ensembles, simple configuration archetypes can efficiently describe a large number of SiQDs, whereas more complex shapes are needed to represent the average ordering of the ensembles. This approach provides a route towards the characterisation of computationally intractable virtual nanomaterial spaces, which can convert big data into smart data, and significantly reduce the workload to simulate experimentally relevant virtual samples.
Observational Evidence of Changes in Water Vapor, Clouds, and Radiation at the ARM SGP Site
NASA Technical Reports Server (NTRS)
Dong, Xiquan; Xi, Baike; Minnus, Patrick
2006-01-01
Characterizing water vapor and cloud effects on the surface radiation budget is critical for understanding the current climate because water vapor is the most important greenhouse gas in the atmosphere and clouds are one of the largest sources of uncertainty in predicting potential future climate change. Several studies have shown that insolation over land declined until 1990 then increased until the present. Using 8 years of surface data, we observed the increasing trend of insolation from 1997 to 2000, but detected a significant decrease from 2001 to 2004. The variation of cloud fraction mirrors that of insolation with an overall increase of 1 percent per year. Under clear-sky conditions, water vapor changes have a greater impact on longwave flux than on insolation.
NASA Astrophysics Data System (ADS)
Mitsui, Takahito; Crucifix, Michel
2017-04-01
The last glacial period was punctuated by a series of abrupt climate shifts, the so-called Dansgaard-Oeschger (DO) events. The frequency of DO events varied in time, supposedly because of changes in background climate conditions. Here, the influence of external forcings on DO events is investigated with statistical modelling. We assume two types of simple stochastic dynamical systems models (double-well potential-type and oscillator-type), forced by the northern hemisphere summer insolation change and/or the global ice volume change. The model parameters are estimated by using the maximum likelihood method with the NGRIP Ca^{2+} record. The stochastic oscillator model with at least the ice volume forcing reproduces well the sample autocorrelation function of the record and the frequency changes of warming transitions in the last glacial period across MISs 2, 3, and 4. The model performance is improved with the additional insolation forcing. The BIC scores also suggest that the ice volume forcing is relatively more important than the insolation forcing, though the strength of evidence depends on the model assumption. Finally, we simulate the average number of warming transitions in the past four glacial periods, assuming the model can be extended beyond the last glacial, and compare the result with an Iberian margin sea-surface temperature (SST) record (Martrat et al. in Science 317(5837): 502-507, 2007). The simulation result supports the previous observation that abrupt millennial-scale climate changes in the penultimate glacial (MIS 6) are less frequent than in the last glacial (MISs 2-4). On the other hand, it suggests that the number of abrupt millennial-scale climate changes in older glacial periods (MISs 6, 8, and 10) might be larger than inferred from the SST record.
Ergodicity of financial indices
NASA Astrophysics Data System (ADS)
Kolesnikov, A. V.; Rühl, T.
2010-05-01
We introduce the concept of the ensemble averaging for financial markets. We address the question of equality of ensemble and time averaging in their sequence and investigate if these averagings are equivalent for large amount of equity indices and branches. We start with the model of Gaussian-distributed returns, equal-weighted stocks in each index and absence of correlations within a single day and show that even this oversimplified model captures already the run of the corresponding index reasonably well due to its self-averaging properties. We introduce the concept of the instant cross-sectional volatility and discuss its relation to the ordinary time-resolved counterpart. The role of the cross-sectional volatility for the description of the corresponding index as well as the role of correlations between the single stocks and the role of non-Gaussianity of stock distributions is briefly discussed. Our model reveals quickly and efficiently some anomalies or bubbles in a particular financial market and gives an estimate of how large these effects can be and how quickly they disappear.
Zhang, Li; Ai, Haixin; Chen, Wen; Yin, Zimo; Hu, Huan; Zhu, Junfeng; Zhao, Jian; Zhao, Qi; Liu, Hongsheng
2017-05-18
Carcinogenicity refers to a highly toxic end point of certain chemicals, and has become an important issue in the drug development process. In this study, three novel ensemble classification models, namely Ensemble SVM, Ensemble RF, and Ensemble XGBoost, were developed to predict carcinogenicity of chemicals using seven types of molecular fingerprints and three machine learning methods based on a dataset containing 1003 diverse compounds with rat carcinogenicity. Among these three models, Ensemble XGBoost is found to be the best, giving an average accuracy of 70.1 ± 2.9%, sensitivity of 67.0 ± 5.0%, and specificity of 73.1 ± 4.4% in five-fold cross-validation and an accuracy of 70.0%, sensitivity of 65.2%, and specificity of 76.5% in external validation. In comparison with some recent methods, the ensemble models outperform some machine learning-based approaches and yield equal accuracy and higher specificity but lower sensitivity than rule-based expert systems. It is also found that the ensemble models could be further improved if more data were available. As an application, the ensemble models are employed to discover potential carcinogens in the DrugBank database. The results indicate that the proposed models are helpful in predicting the carcinogenicity of chemicals. A web server called CarcinoPred-EL has been built for these models ( http://ccsipb.lnu.edu.cn/toxicity/CarcinoPred-EL/ ).
The interplay between cooperativity and diversity in model threshold ensembles.
Cervera, Javier; Manzanares, José A; Mafe, Salvador
2014-10-06
The interplay between cooperativity and diversity is crucial for biological ensembles because single molecule experiments show a significant degree of heterogeneity and also for artificial nanostructures because of the high individual variability characteristic of nanoscale units. We study the cross-effects between cooperativity and diversity in model threshold ensembles composed of individually different units that show a cooperative behaviour. The units are modelled as statistical distributions of parameters (the individual threshold potentials here) characterized by central and width distribution values. The simulations show that the interplay between cooperativity and diversity results in ensemble-averaged responses of interest for the understanding of electrical transduction in cell membranes, the experimental characterization of heterogeneous groups of biomolecules and the development of biologically inspired engineering designs with individually different building blocks. © 2014 The Author(s) Published by the Royal Society. All rights reserved.
Confidence-based ensemble for GBM brain tumor segmentation
NASA Astrophysics Data System (ADS)
Huo, Jing; van Rikxoort, Eva M.; Okada, Kazunori; Kim, Hyun J.; Pope, Whitney; Goldin, Jonathan; Brown, Matthew
2011-03-01
It is a challenging task to automatically segment glioblastoma multiforme (GBM) brain tumors on T1w post-contrast isotropic MR images. A semi-automated system using fuzzy connectedness has recently been developed for computing the tumor volume that reduces the cost of manual annotation. In this study, we propose a an ensemble method that combines multiple segmentation results into a final ensemble one. The method is evaluated on a dataset of 20 cases from a multi-center pharmaceutical drug trial and compared to the fuzzy connectedness method. Three individual methods were used in the framework: fuzzy connectedness, GrowCut, and voxel classification. The combination method is a confidence map averaging (CMA) method. The CMA method shows an improved ROC curve compared to the fuzzy connectedness method (p < 0.001). The CMA ensemble result is more robust compared to the three individual methods.
NASA Astrophysics Data System (ADS)
Abaza, Mabrouk; Anctil, François; Fortin, Vincent; Perreault, Luc
2017-12-01
Meteorological and hydrological ensemble prediction systems are imperfect. Their outputs could often be improved through the use of a statistical processor, opening up the question of the necessity of using both processors (meteorological and hydrological), only one of them, or none. This experiment compares the predictive distributions from four hydrological ensemble prediction systems (H-EPS) utilising the Ensemble Kalman filter (EnKF) probabilistic sequential data assimilation scheme. They differ in the inclusion or not of the Distribution Based Scaling (DBS) method for post-processing meteorological forecasts and the ensemble Bayesian Model Averaging (ensemble BMA) method for hydrological forecast post-processing. The experiment is implemented on three large watersheds and relies on the combination of two meteorological reforecast products: the 4-member Canadian reforecasts from the Canadian Centre for Meteorological and Environmental Prediction (CCMEP) and the 10-member American reforecasts from the National Oceanic and Atmospheric Administration (NOAA), leading to 14 members at each time step. Results show that all four tested H-EPS lead to resolution and sharpness values that are quite similar, with an advantage to DBS + EnKF. The ensemble BMA is unable to compensate for any bias left in the precipitation ensemble forecasts. On the other hand, it succeeds in calibrating ensemble members that are otherwise under-dispersed. If reliability is preferred over resolution and sharpness, DBS + EnKF + ensemble BMA performs best, making use of both processors in the H-EPS system. Conversely, for enhanced resolution and sharpness, DBS is the preferred method.
Ensemble Downscaling of Winter Seasonal Forecasts: The MRED Project
NASA Astrophysics Data System (ADS)
Arritt, R. W.; Mred Team
2010-12-01
The Multi-Regional climate model Ensemble Downscaling (MRED) project is a multi-institutional project that is producing large ensembles of downscaled winter seasonal forecasts from coupled atmosphere-ocean seasonal prediction models. Eight regional climate models each are downscaling 15-member ensembles from the National Centers for Environmental Prediction (NCEP) Climate Forecast System (CFS) and the new NASA seasonal forecast system based on the GEOS5 atmospheric model coupled with the MOM4 ocean model. This produces 240-member ensembles, i.e., 8 regional models x 15 global ensemble members x 2 global models, for each winter season (December-April) of 1982-2003. Results to date show that combined global-regional downscaled forecasts have greatest skill for seasonal precipitation anomalies during strong El Niño events such as 1982-83 and 1997-98. Ensemble means of area-averaged seasonal precipitation for the regional models generally track the corresponding results for the global model, though there is considerable inter-model variability amongst the regional models. For seasons and regions where area mean precipitation is accurately simulated the regional models bring added value by extracting greater spatial detail from the global forecasts, mainly due to better resolution of terrain in the regional models. Our results also emphasize that an ensemble approach is essential to realizing the added value from the combined global-regional modeling system.
Insights into the deterministic skill of air quality ensembles ...
Simulations from chemical weather models are subject to uncertainties in the input data (e.g. emission inventory, initial and boundary conditions) as well as those intrinsic to the model (e.g. physical parameterization, chemical mechanism). Multi-model ensembles can improve the forecast skill, provided that certain mathematical conditions are fulfilled. In this work, four ensemble methods were applied to two different datasets, and their performance was compared for ozone (O3), nitrogen dioxide (NO2) and particulate matter (PM10). Apart from the unconditional ensemble average, the approach behind the other three methods relies on adding optimum weights to members or constraining the ensemble to those members that meet certain conditions in time or frequency domain. The two different datasets were created for the first and second phase of the Air Quality Model Evaluation International Initiative (AQMEII). The methods are evaluated against ground level observations collected from the EMEP (European Monitoring and Evaluation Programme) and AirBase databases. The goal of the study is to quantify to what extent we can extract predictable signals from an ensemble with superior skill over the single models and the ensemble mean. Verification statistics show that the deterministic models simulate better O3 than NO2 and PM10, linked to different levels of complexity in the represented processes. The unconditional ensemble mean achieves higher skill compared to each stati
2010-07-13
band members by providing them shoes with some favorable properties such as outsoles with built in compression pads in the heel and forefoot as well...compared to a no insole condition49 and that peak pressure generated at the forefoot and heel have been reduced by 24 percent and 37 percent...Attenuation of spinal transients at heel strike using viscoelastic heel insoles: an in vivo study. Preventive Medicine. 2004;39:351-354. 30
Effects of low-energy laser insolation upon the development of postradiation syndrome
NASA Astrophysics Data System (ADS)
Pavlova, Rimma N.; Gomberg, Vladimir G.; Boiko, Vladimir A.; Pupkova, Ludmila S.; Reznikov, Leonid L.; Dadali, V. A.
1996-04-01
Basic pathogenic research as well as the studies of clinical therapeutic aspects dealing with the long-term gamma radiation effects are of utmost significance nowadays. The main goal of the present study was to establish the capability of low-energy laser insolation to oppose the free radical oxidative chain reactions inherent to the effects of radiation. Adequate doses of low- energy laser insolation were shown to produce positive effects upon the metabolism similar to those of pharmacologic radioprotectors.
Solar energy microclimate as determined from satellite observations
NASA Technical Reports Server (NTRS)
Vonder Haar, T. H.; Ellis, J. S.
1975-01-01
A method is presented for determining solar insolation at the earth's surface using satellite broadband visible radiance and cloud imagery data, along with conventional in situ measurements. Conventional measurements are used to both tune satellite measurements and to develop empirical relationships between satellite observations and surface solar insolation. Cloudiness is the primary modulator of sunshine. The satellite measurements as applied in this method consider cloudiness both explicitly and implicitly in determining surface solar insolation at space scales smaller than the conventional pyranometer network.
Viney, N.R.; Bormann, H.; Breuer, L.; Bronstert, A.; Croke, B.F.W.; Frede, H.; Graff, T.; Hubrechts, L.; Huisman, J.A.; Jakeman, A.J.; Kite, G.W.; Lanini, J.; Leavesley, G.; Lettenmaier, D.P.; Lindstrom, G.; Seibert, J.; Sivapalan, M.; Willems, P.
2009-01-01
This paper reports on a project to compare predictions from a range of catchment models applied to a mesoscale river basin in central Germany and to assess various ensemble predictions of catchment streamflow. The models encompass a large range in inherent complexity and input requirements. In approximate order of decreasing complexity, they are DHSVM, MIKE-SHE, TOPLATS, WASIM-ETH, SWAT, PRMS, SLURP, HBV, LASCAM and IHACRES. The models are calibrated twice using different sets of input data. The two predictions from each model are then combined by simple averaging to produce a single-model ensemble. The 10 resulting single-model ensembles are combined in various ways to produce multi-model ensemble predictions. Both the single-model ensembles and the multi-model ensembles are shown to give predictions that are generally superior to those of their respective constituent models, both during a 7-year calibration period and a 9-year validation period. This occurs despite a considerable disparity in performance of the individual models. Even the weakest of models is shown to contribute useful information to the ensembles they are part of. The best model combination methods are a trimmed mean (constructed using the central four or six predictions each day) and a weighted mean ensemble (with weights calculated from calibration performance) that places relatively large weights on the better performing models. Conditional ensembles, in which separate model weights are used in different system states (e.g. summer and winter, high and low flows) generally yield little improvement over the weighted mean ensemble. However a conditional ensemble that discriminates between rising and receding flows shows moderate improvement. An analysis of ensemble predictions shows that the best ensembles are not necessarily those containing the best individual models. Conversely, it appears that some models that predict well individually do not necessarily combine well with other models in multi-model ensembles. The reasons behind these observations may relate to the effects of the weighting schemes, non-stationarity of the climate series and possible cross-correlations between models. Crown Copyright ?? 2008.
Insolation-driven 100 kyr glacial cycles and millennial climate change
NASA Astrophysics Data System (ADS)
Abe-Ouchi, A.; Saito, F.; Kawamura, K.; Raymo, M. E.; Okuno, J.; Takahashi, K.; Blatter, H.
2013-12-01
The waxing and waning of Northern Hemisphere ice sheets over the past one million years is dominated by an approximately 100-kyr periodicity and a sawtooth pattern (gradual growth and fast termination). Milankovitch theory proposes that summer insolation at high northern latitudes drives the glacial cycles, and statistical tests demonstrated that the glacial cycles are indeed linked to eccentricity, obliquity and precession cycles. However, insolation alone cannot explain the strong 100 kyr cycle which presumably arises through internal climatic feedbacks. Prior work with conceptual models, for example, showed that glacial terminations are associated with the build-up of Northern Hemisphere 'excess ice', but the physical mechanisms of 100-kyr cycle at work remain unclear. Here, using comprehensive climate and ice sheet models, we show that the ~100-kyr periodicity is explained by insolation and internal feedback amongst the climate, ice sheet and lithosphere/asthenosphere system (reference). We found that equilibrium states of ice sheets exhibit hysteresis responses to summer insolation, and that the shape and position of the hysteresis loop play a key role in determining the periodicities of glacial cycles. The hysteresis loop of the North American ice sheet is such that, after its inception, the ice sheet mass balance remains mostly positive or neutral through several precession cycles whose amplitude decreases towards an eccentricity minimum. The larger the ice sheet grows and extends towards lower latitudes, the smaller is the insolation required to turn the mass balance to negative. Therefore, once the large ice sheet is established, only a moderate increase in insolation can trigger a negative mass balance, leading to a complete retreat within several thousand years, due to the delayed isostatic rebound. The effect of ocean circulation and millennial scale climate change are not playing the dominant role for determing the 100kyr cycle, but are effective for modifying the speed and geographical pattern of the waxing and waning of the Northern Hemisphere ice sheets and their melt water. (reference of the basic results: Abe-Ouchi et al, 2013, Insolation-driven 100,000 year glacial cycles and hysteresis of ice-sheet volume, Nature, 500, 190-193.)
NASA Astrophysics Data System (ADS)
Yongye, Austin B.; Bender, Andreas; Martínez-Mayorga, Karina
2010-08-01
Representing the 3D structures of ligands in virtual screenings via multi-conformer ensembles can be computationally intensive, especially for compounds with a large number of rotatable bonds. Thus, reducing the size of multi-conformer databases and the number of query conformers, while simultaneously reproducing the bioactive conformer with good accuracy, is of crucial interest. While clustering and RMSD filtering methods are employed in existing conformer generators, the novelty of this work is the inclusion of a clustering scheme (NMRCLUST) that does not require a user-defined cut-off value. This algorithm simultaneously optimizes the number and the average spread of the clusters. Here we describe and test four inter-dependent approaches for selecting computer-generated conformers, namely: OMEGA, NMRCLUST, RMS filtering and averaged- RMS filtering. The bioactive conformations of 65 selected ligands were extracted from the corresponding protein:ligand complexes from the Protein Data Bank, including eight ligands that adopted dissimilar bound conformations within different receptors. We show that NMRCLUST can be employed to further filter OMEGA-generated conformers while maintaining biological relevance of the ensemble. It was observed that NMRCLUST (containing on average 10 times fewer conformers per compound) performed nearly as well as OMEGA, and both outperformed RMS filtering and averaged- RMS filtering in terms of identifying the bioactive conformations with excellent and good matches (0.5 < RMSD < 1.0 Å). Furthermore, we propose thresholds for OMEGA root-mean square filtering depending on the number of rotors in a compound: 0.8, 1.0 and 1.4 for structures with low (1-4), medium (5-9) and high (10-15) numbers of rotatable bonds, respectively. The protocol employed is general and can be applied to reduce the number of conformers in multi-conformer compound collections and alleviate the complexity of downstream data processing in virtual screening experiments.
Near-optimal protocols in complex nonequilibrium transformations
Gingrich, Todd R.; Rotskoff, Grant M.; Crooks, Gavin E.; ...
2016-08-29
The development of sophisticated experimental means to control nanoscale systems has motivated efforts to design driving protocols that minimize the energy dissipated to the environment. Computational models are a crucial tool in this practical challenge. In this paper, we describe a general method for sampling an ensemble of finite-time, nonequilibrium protocols biased toward a low average dissipation. In addition, we show that this scheme can be carried out very efficiently in several limiting cases. As an application, we sample the ensemble of low-dissipation protocols that invert the magnetization of a 2D Ising model and explore how the diversity of themore » protocols varies in response to constraints on the average dissipation. In this example, we find that there is a large set of protocols with average dissipation close to the optimal value, which we argue is a general phenomenon.« less
Gu, Yuhua; Kumar, Virendra; Hall, Lawrence O; Goldgof, Dmitry B; Li, Ching-Yen; Korn, René; Bendtsen, Claus; Velazquez, Emmanuel Rios; Dekker, Andre; Aerts, Hugo; Lambin, Philippe; Li, Xiuli; Tian, Jie; Gatenby, Robert A; Gillies, Robert J
2012-01-01
A single click ensemble segmentation (SCES) approach based on an existing “Click&Grow” algorithm is presented. The SCES approach requires only one operator selected seed point as compared with multiple operator inputs, which are typically needed. This facilitates processing large numbers of cases. Evaluation on a set of 129 CT lung tumor images using a similarity index (SI) was done. The average SI is above 93% using 20 different start seeds, showing stability. The average SI for 2 different readers was 79.53%. We then compared the SCES algorithm with the two readers, the level set algorithm and the skeleton graph cut algorithm obtaining an average SI of 78.29%, 77.72%, 63.77% and 63.76% respectively. We can conclude that the newly developed automatic lung lesion segmentation algorithm is stable, accurate and automated. PMID:23459617
Adachi, Yasumoto; Makita, Kohei
2015-09-01
Mycobacteriosis in swine is a common zoonosis found in abattoirs during meat inspections, and the veterinary authority is expected to inform the producer for corrective actions when an outbreak is detected. The expected value of the number of condemned carcasses due to mycobacteriosis therefore would be a useful threshold to detect an outbreak, and the present study aims to develop such an expected value through time series modeling. The model was developed using eight years of inspection data (2003 to 2010) obtained at 2 abattoirs of the Higashi-Mokoto Meat Inspection Center, Japan. The resulting model was validated by comparing the predicted time-dependent values for the subsequent 2 years with the actual data for 2 years between 2011 and 2012. For the modeling, at first, periodicities were checked using Fast Fourier Transformation, and the ensemble average profiles for weekly periodicities were calculated. An Auto-Regressive Integrated Moving Average (ARIMA) model was fitted to the residual of the ensemble average on the basis of minimum Akaike's information criterion (AIC). The sum of the ARIMA model and the weekly ensemble average was regarded as the time-dependent expected value. During 2011 and 2012, the number of whole or partial condemned carcasses exceeded the 95% confidence interval of the predicted values 20 times. All of these events were associated with the slaughtering of pigs from three producers with the highest rate of condemnation due to mycobacteriosis.
Solar Radiation on Mars: Tracking Photovoltaic Array
NASA Technical Reports Server (NTRS)
Appelbaum, Joseph; Flood, Dennis J.; Crutchik, Marcos
1994-01-01
A photovoltaic power source for surface-based operation on Mars can offer many advantages. Detailed information on solar radiation characteristics on Mars and the insolation on various types of collector surfaces are necessary for effective design of future planned photovoltaic systems. In this article we have presented analytical expressions for solar radiation calculation and solar radiation data for single axis (of various types) and two axis tracking surfaces and compared the insulation to horizontal and inclined surfaces. For clear skies (low atmospheric dust load) tracking surfaces resulted in higher insolation than stationary surfaces, whereas for highly dusty atmospheres, the difference is small. The insolation on the different types of stationary and tracking surfaces depend on latitude, season and optical depth of the atmosphere, and the duration of system operation. These insolations have to be compared for each mission.
Biomechanics of stair walking and jumping.
Loy, D J; Voloshin, A S
1991-01-01
Physical activities such as stair walking and jumping result in increased dynamic loading on the human musculoskeletal system. Use of light weight, externally attached accelerometers allows for in-vivo monitoring of the shock waves invading the human musculoskeletal system during those activities. Shock waves were measured in four subjects performing stair walking up and down, jumping in place and jumping off a fixed elevation. The results obtained show that walking down a staircase induced shock waves with amplitude of 130% of that observed in walking up stairs and 250% of the shock waves experienced in level gait. The jumping test revealed levels of the shock waves nearly eight times higher than that in level walking. It was also shown that the shock waves invading the human musculoskeletal system may be generated not only by the heel strike, but also by the metatarsal strike. To moderate the risk of degenerative joint disorders four types of viscoelastic insoles were utilized to reduce the impact generated shock waves. The insoles investigated were able to reduce the amplitude of the shock wave by between 9% and 41% depending on the insole type and particular physical activity. The insoles were more effective in the reduction of the heel strike impacts than in the reduction of the metatarsal strike impacts. In all instances, the shock attenuation capacities of the insoles tested were greater in the jumping trials than in the stair walking studies. The insoles were ranked in three groups on the basis of their shock absorbing capacity.
Clustering cancer gene expression data by projective clustering ensemble
Yu, Xianxue; Yu, Guoxian
2017-01-01
Gene expression data analysis has paramount implications for gene treatments, cancer diagnosis and other domains. Clustering is an important and promising tool to analyze gene expression data. Gene expression data is often characterized by a large amount of genes but with limited samples, thus various projective clustering techniques and ensemble techniques have been suggested to combat with these challenges. However, it is rather challenging to synergy these two kinds of techniques together to avoid the curse of dimensionality problem and to boost the performance of gene expression data clustering. In this paper, we employ a projective clustering ensemble (PCE) to integrate the advantages of projective clustering and ensemble clustering, and to avoid the dilemma of combining multiple projective clusterings. Our experimental results on publicly available cancer gene expression data show PCE can improve the quality of clustering gene expression data by at least 4.5% (on average) than other related techniques, including dimensionality reduction based single clustering and ensemble approaches. The empirical study demonstrates that, to further boost the performance of clustering cancer gene expression data, it is necessary and promising to synergy projective clustering with ensemble clustering. PCE can serve as an effective alternative technique for clustering gene expression data. PMID:28234920
NASA Astrophysics Data System (ADS)
Kobayashi, Kenji; Takano, Ichiro; Sawada, Yoshio
A photovoltaic array shows relatively low output power density, and has a greatly drooping Current-Voltage (I-V) characteristic. Therefore, Maximum Power Point Tracking (MPPT) control is used to maximize the output power of the array. Many papers have been reported in relation to MPPT. However, the Current-Power (I-P) curve sometimes shows multi-local maximum points mode under non-uniform insolation conditions. The operating point of the PV system tends to converge to a local maximum output point which is not the real maximal output point on the I-P curve. Some papers have been also reported, trying to avoid this difficulty. However most of those control systems become rather complicated. Then, the two stage MPPT control method is proposed in this paper to realize a relatively simple control system which can track the real maximum power point even under non-uniform insolation conditions. The feasibility of this control concept is confirmed for steady insolation as well as for rapidly changing insolation by simulation study using software PSIM and LabVIEW. In addition, simulated experiment confirms fundament al operation of the two stage MPPT control.
NASA Astrophysics Data System (ADS)
Huang, Yu
Solar energy becomes one of the major alternative renewable energy options for its huge abundance and accessibility. Due to the intermittent nature, the high demand of Maximum Power Point Tracking (MPPT) techniques exists when a Photovoltaic (PV) system is used to extract energy from the sunlight. This thesis proposed an advanced Perturbation and Observation (P&O) algorithm aiming for relatively practical circumstances. Firstly, a practical PV system model is studied with determining the series and shunt resistances which are neglected in some research. Moreover, in this proposed algorithm, the duty ratio of a boost DC-DC converter is the object of the perturbation deploying input impedance conversion to achieve working voltage adjustment. Based on the control strategy, the adaptive duty ratio step size P&O algorithm is proposed with major modifications made for sharp insolation change as well as low insolation scenarios. Matlab/Simulink simulation for PV model, boost converter control strategy and various MPPT process is conducted step by step. The proposed adaptive P&O algorithm is validated by the simulation results and detail analysis of sharp insolation changes, low insolation condition and continuous insolation variation.
Inferring properties of disordered chains from FRET transfer efficiencies
NASA Astrophysics Data System (ADS)
Zheng, Wenwei; Zerze, Gül H.; Borgia, Alessandro; Mittal, Jeetain; Schuler, Benjamin; Best, Robert B.
2018-03-01
Förster resonance energy transfer (FRET) is a powerful tool for elucidating both structural and dynamic properties of unfolded or disordered biomolecules, especially in single-molecule experiments. However, the key observables, namely, the mean transfer efficiency and fluorescence lifetimes of the donor and acceptor chromophores, are averaged over a broad distribution of donor-acceptor distances. The inferred average properties of the ensemble therefore depend on the form of the model distribution chosen to describe the distance, as has been widely recognized. In addition, while the distribution for one type of polymer model may be appropriate for a chain under a given set of physico-chemical conditions, it may not be suitable for the same chain in a different environment so that even an apparently consistent application of the same model over all conditions may distort the apparent changes in chain dimensions with variation of temperature or solution composition. Here, we present an alternative and straightforward approach to determining ensemble properties from FRET data, in which the polymer scaling exponent is allowed to vary with solution conditions. In its simplest form, it requires either the mean FRET efficiency or fluorescence lifetime information. In order to test the accuracy of the method, we have utilized both synthetic FRET data from implicit and explicit solvent simulations for 30 different protein sequences, and experimental single-molecule FRET data for an intrinsically disordered and a denatured protein. In all cases, we find that the inferred radii of gyration are within 10% of the true values, thus providing higher accuracy than simpler polymer models. In addition, the scaling exponents obtained by our procedure are in good agreement with those determined directly from the molecular ensemble. Our approach can in principle be generalized to treating other ensemble-averaged functions of intramolecular distances from experimental data.
Simulation of tropical cyclone activity over the western North Pacific based on CMIP5 models
NASA Astrophysics Data System (ADS)
Shen, Haibo; Zhou, Weican; Zhao, Haikun
2017-09-01
Based on the Coupled Model Inter-comparison Project 5 (CMIP5) models, the tropical cyclone (TC) activity in the summers of 1965-2005 over the western North Pacific (WNP) is simulated by a TC dynamically downscaling system. In consideration of diversity among climate models, Bayesian model averaging (BMA) and equal-weighed model averaging (EMA) methods are applied to produce the ensemble large-scale environmental factors of the CMIP5 model outputs. The environmental factors generated by BMA and EMA methods are compared, as well as the corresponding TC simulations by the downscaling system. Results indicate that BMA method shows a significant advantage over the EMA. In addition, impacts of model selections on BMA method are examined. To each factor, ten models with better performance are selected from 30 CMIP5 models and then conduct BMA, respectively. As a consequence, the ensemble environmental factors and simulated TC activity are similar with the results from the 30 models' BMA, which verifies the BMA method can afford corresponding weight for each model in the ensemble based on the model's predictive skill. Thereby, the existence of poor performance models will not particularly affect the BMA effectiveness and the ensemble outcomes are improved. Finally, based upon the BMA method and downscaling system, we analyze the sensitivity of TC activity to three important environmental factors, i.e., sea surface temperature (SST), large-scale steering flow, and vertical wind shear. Among three factors, SST and large-scale steering flow greatly affect TC tracks, while average intensity distribution is sensitive to all three environmental factors. Moreover, SST and vertical wind shear jointly play a critical role in the inter-annual variability of TC lifetime maximum intensity and frequency of intense TCs.
Ackerly, David D.; Cornwell, William K.; Weiss, Stuart B.; Flint, Lorraine E.; Flint, Alan L.
2015-01-01
Changes in climate projected for the 21st century are expected to trigger widespread and pervasive biotic impacts. Forecasting these changes and their implications for ecosystem services is a major research goal. Much of the research on biotic responses to climate change has focused on either projected shifts in individual species distributions or broad-scale changes in biome distributions. Here, we introduce a novel application of multinomial logistic regression as a powerful approach to model vegetation distributions and potential responses to 21st century climate change. We modeled the distribution of 22 major vegetation types, most defined by a single dominant woody species, across the San Francisco Bay Area. Predictor variables included climate and topographic variables. The novel aspect of our model is the output: a vector of relative probabilities for each vegetation type in each location within the study domain. The model was then projected for 54 future climate scenarios, spanning a representative range of temperature and precipitation projections from the CMIP3 and CMIP5 ensembles. We found that sensitivity of vegetation to climate change is highly heterogeneous across the region. Surprisingly, sensitivity to climate change is higher closer to the coast, on lower insolation, north-facing slopes and in areas of higher precipitation. While such sites may provide refugia for mesic and cool-adapted vegetation in the face of a warming climate, the model suggests they will still be highly dynamic and relatively sensitive to climate-driven vegetation transitions. The greater sensitivity of moist and low insolation sites is an unexpected outcome that challenges views on the location and stability of climate refugia. Projections provide a foundation for conservation planning and land management, and highlight the need for a greater understanding of the mechanisms and time scales of potential climate-driven vegetation transitions. PMID:26115485
Synchronization Experiments With A Global Coupled Model of Intermediate Complexity
NASA Astrophysics Data System (ADS)
Selten, Frank; Hiemstra, Paul; Shen, Mao-Lin
2013-04-01
In the super modeling approach an ensemble of imperfect models are connected through nudging terms that nudge the solution of each model to the solution of all other models in the ensemble. The goal is to obtain a synchronized state through a proper choice of connection strengths that closely tracks the trajectory of the true system. For the super modeling approach to be successful, the connections should be dense and strong enough for synchronization to occur. In this study we analyze the behavior of an ensemble of connected global atmosphere-ocean models of intermediate complexity. All atmosphere models are connected to the same ocean model through the surface fluxes of heat, water and momentum, the ocean is integrated using weighted averaged surface fluxes. In particular we analyze the degree of synchronization between the atmosphere models and the characteristics of the ensemble mean solution. The results are interpreted using a low order atmosphere-ocean toy model.
Machine Learning Predictions of a Multiresolution Climate Model Ensemble
NASA Astrophysics Data System (ADS)
Anderson, Gemma J.; Lucas, Donald D.
2018-05-01
Statistical models of high-resolution climate models are useful for many purposes, including sensitivity and uncertainty analyses, but building them can be computationally prohibitive. We generated a unique multiresolution perturbed parameter ensemble of a global climate model. We use a novel application of a machine learning technique known as random forests to train a statistical model on the ensemble to make high-resolution model predictions of two important quantities: global mean top-of-atmosphere energy flux and precipitation. The random forests leverage cheaper low-resolution simulations, greatly reducing the number of high-resolution simulations required to train the statistical model. We demonstrate that high-resolution predictions of these quantities can be obtained by training on an ensemble that includes only a small number of high-resolution simulations. We also find that global annually averaged precipitation is more sensitive to resolution changes than to any of the model parameters considered.
Bayesian Ensemble Trees (BET) for Clustering and Prediction in Heterogeneous Data
Duan, Leo L.; Clancy, John P.; Szczesniak, Rhonda D.
2016-01-01
We propose a novel “tree-averaging” model that utilizes the ensemble of classification and regression trees (CART). Each constituent tree is estimated with a subset of similar data. We treat this grouping of subsets as Bayesian Ensemble Trees (BET) and model them as a Dirichlet process. We show that BET determines the optimal number of trees by adapting to the data heterogeneity. Compared with the other ensemble methods, BET requires much fewer trees and shows equivalent prediction accuracy using weighted averaging. Moreover, each tree in BET provides variable selection criterion and interpretation for each subset. We developed an efficient estimating procedure with improved estimation strategies in both CART and mixture models. We demonstrate these advantages of BET with simulations and illustrate the approach with a real-world data example involving regression of lung function measurements obtained from patients with cystic fibrosis. Supplemental materials are available online. PMID:27524872
Song, Wan-lu; Yang, Wan-li; Yin, Zhang-qi; Chen, Chang-yong; Feng, Mang
2016-01-01
We explore controllable quantum dynamics of a hybrid system, which consists of an array of mutually coupled superconducting resonators (SRs) with each containing a nitrogen-vacancy center spin ensemble (NVE) in the presence of inhomogeneous broadening. We focus on a three-site model, which compared with the two-site case, shows more complicated and richer dynamical behavior, and displays a series of damped oscillations under various experimental situations, reflecting the intricate balance and competition between the NVE-SR collective coupling and the adjacent-site photon hopping. Particularly, we find that the inhomogeneous broadening of the spin ensemble can suppress the population transfer between the SR and the local NVE. In this context, although the inhomogeneous broadening of the spin ensemble diminishes entanglement among the NVEs, optimal entanglement, characterized by averaging the lower bound of concurrence, could be achieved through accurately adjusting the tunable parameters. PMID:27627994
An ensemble rank learning approach for gene prioritization.
Lee, Po-Feng; Soo, Von-Wun
2013-01-01
Several different computational approaches have been developed to solve the gene prioritization problem. We intend to use the ensemble boosting learning techniques to combine variant computational approaches for gene prioritization in order to improve the overall performance. In particular we add a heuristic weighting function to the Rankboost algorithm according to: 1) the absolute ranks generated by the adopted methods for a certain gene, and 2) the ranking relationship between all gene-pairs from each prioritization result. We select 13 known prostate cancer genes in OMIM database as training set and protein coding gene data in HGNC database as test set. We adopt the leave-one-out strategy for the ensemble rank boosting learning. The experimental results show that our ensemble learning approach outperforms the four gene-prioritization methods in ToppGene suite in the ranking results of the 13 known genes in terms of mean average precision, ROC and AUC measures.
Ensemble Perception of Dynamic Emotional Groups.
Elias, Elric; Dyer, Michael; Sweeny, Timothy D
2017-02-01
Crowds of emotional faces are ubiquitous, so much so that the visual system utilizes a specialized mechanism known as ensemble coding to see them. In addition to being proximally close, members of emotional crowds, such as a laughing audience or an angry mob, often behave together. The manner in which crowd members behave-in sync or out of sync-may be critical for understanding their collective affect. Are ensemble mechanisms sensitive to these dynamic properties of groups? Here, observers estimated the average emotion of a crowd of dynamic faces. The members of some crowds changed their expressions synchronously, whereas individuals in other crowds acted asynchronously. Observers perceived the emotion of a synchronous group more precisely than the emotion of an asynchronous crowd or even a single dynamic face. These results demonstrate that ensemble representation is particularly sensitive to coordinated behavior, and they suggest that shared behavior is critical for understanding emotion in groups.
Spatial variation of pneumonia hospitalization risk in Twin Cities metro area, Minnesota.
Iroh Tam, P Y; Krzyzanowski, B; Oakes, J M; Kne, L; Manson, S
2017-11-01
Fine resolution spatial variability in pneumonia hospitalization may identify correlates with socioeconomic, demographic and environmental factors. We performed a retrospective study within the Fairview Health System network of Minnesota. Patients 2 months of age and older hospitalized with pneumonia between 2011 and 2015 were geocoded to their census block group, and pneumonia hospitalization risk was analyzed in relation to socioeconomic, demographic and environmental factors. Spatial analyses were performed using Esri's ArcGIS software, and multivariate Poisson regression was used. Hospital encounters of 17 840 patients were included in the analysis. Multivariate Poisson regression identified several significant associations, including a 40% increased risk of pneumonia hospitalization among census block groups with large, compared with small, populations of ⩾65 years, a 56% increased risk among census block groups in the bottom (first) quartile of median household income compared to the top (fourth) quartile, a 44% higher risk in the fourth quartile of average nitrogen dioxide emissions compared with the first quartile, and a 47% higher risk in the fourth quartile of average annual solar insolation compared to the first quartile. After adjusting for income, moving from the first to the second quartile of the race/ethnic diversity index resulted in a 21% significantly increased risk of pneumonia hospitalization. In conclusion, the risk of pneumonia hospitalization at the census-block level is associated with age, income, race/ethnic diversity index, air quality, and solar insolation, and varies by region-specific factors. Identifying correlates using fine spatial analysis provides opportunities for targeted prevention and control.
NASA Astrophysics Data System (ADS)
Zhang, Rui; White, Andrew T.; Pour Biazar, Arastoo; McNider, Richard T.; Cohan, Daniel S.
2018-01-01
This study examines the influence of insolation and cloud retrieval products from the Geostationary Operational Environmental Satellite (GOES) system on biogenic emission estimates and ozone simulations in Texas. Compared to surface pyranometer observations, satellite-retrieved insolation and photosynthetically active radiation (PAR) values tend to systematically correct the overestimation of downwelling shortwave radiation in the Weather Research and Forecasting (WRF) model. The correlation coefficient increases from 0.93 to 0.97, and the normalized mean error decreases from 36% to 21%. The isoprene and monoterpene emissions estimated by the Model of Emissions of Gases and Aerosols from Nature are on average 20% and 5% less, respectively, when PAR from the direct satellite retrieval is used rather than the control WRF run. The reduction in biogenic emission rates using satellite PAR reduced the predicted maximum daily 8 h ozone concentration by up to 5.3 ppbV over the Dallas-Fort Worth (DFW) region on some days. However, episode average ozone response is less sensitive, with a 0.6 ppbV decrease near DFW and 0.3 ppbV increase over East Texas. The systematic overestimation of isoprene concentrations in a WRF control case is partially corrected by using satellite PAR, which observes more clouds than are simulated by WRF. Further, assimilation of GOES-derived cloud fields in WRF improved CAMx model performance for ground-level ozone over Texas. Additionally, it was found that using satellite PAR improved the model's ability to replicate the spatial pattern of satellite-derived formaldehyde columns and aircraft-observed vertical profiles of isoprene.
Li, Xukai; Liao, Haofeng; Fan, Chunfen; Hu, Huizhen; Li, Ying; Li, Jing; Yi, Zili; Cai, Xiwen; Peng, Liangcai; Tu, Yuanyuan
2016-01-01
Miscanthus is a leading bioenergy candidate for biofuels, and it thus becomes essential to characterize the desire natural Miscanthus germplasm accessions with high biomass saccharification. In this study, total 171 natural Miscanthus accessions were geographically mapped using public database. According to the equation [P(H/L| East) = P(H/L∩East)/P(East)], the probability (P) parameters were calculated on relationships between geographical distributions of Miscanthus accessions in the East of China, and related factors with high(H) or low(L) values including biomass saccahrification under 1% NaOH and 1% H2SO4 pretreatments, lignocellulose features and climate conditions. Based on the maximum P value, a golden cutting line was generated from 42°25’ N, 108°22’ E to 22°58’ N, 116°28’ E on the original locations of Miscanthus accessions with high P(H|East) values (0.800–0.813), indicating that more than 90% Miscanthus accessions were originally located in the East with high biomass saccharification. Furthermore, the averaged insolation showed high P (H|East) and P(East|H) values at 0.782 and 0.754, whereas other climate factors had low P(East|H) values, suggesting that the averaged insolation is unique factor on Miscanthus distributions for biomass saccharification. In terms of cell wall compositions and wall polymer features, both hemicelluloses level and cellulose crystallinity (CrI) of Miscanthus accessions exhibited relative high P values, suggesting that they should be the major factors accounting for geographic distributions of Miscanthus accessions with high biomass digestibility. PMID:27532636
Evidence for Dynamic Chemical Kinetics at Individual Molecular Ruthenium Catalysts.
Easter, Quinn T; Blum, Suzanne A
2018-02-05
Catalytic cycles are typically depicted as possessing time-invariant steps with fixed rates. Yet the true behavior of individual catalysts with respect to time is unknown, hidden by the ensemble averaging inherent to bulk measurements. Evidence is presented for variable chemical kinetics at individual catalysts, with a focus on ring-opening metathesis polymerization catalyzed by the second-generation Grubbs' ruthenium catalyst. Fluorescence microscopy is used to probe the chemical kinetics of the reaction because the technique possesses sufficient sensitivity for the detection of single chemical reactions. Insertion reactions in submicron regions likely occur at groups of many (not single) catalysts, yet not so many that their unique kinetic behavior is ensemble averaged. © 2018 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.
DOE Office of Scientific and Technical Information (OSTI.GOV)
Makarashvili, Vakhtang; Merzari, Elia; Obabko, Aleksandr
We analyze the potential performance benefits of estimating expected quantities in large eddy simulations of turbulent flows using true ensembles rather than ergodic time averaging. Multiple realizations of the same flow are simulated in parallel, using slightly perturbed initial conditions to create unique instantaneous evolutions of the flow field. Each realization is then used to calculate statistical quantities. Provided each instance is sufficiently de-correlated, this approach potentially allows considerable reduction in the time to solution beyond the strong scaling limit for a given accuracy. This study focuses on the theory and implementation of the methodology in Nek5000, a massively parallelmore » open-source spectral element code.« less
Makarashvili, Vakhtang; Merzari, Elia; Obabko, Aleksandr; ...
2017-06-07
We analyze the potential performance benefits of estimating expected quantities in large eddy simulations of turbulent flows using true ensembles rather than ergodic time averaging. Multiple realizations of the same flow are simulated in parallel, using slightly perturbed initial conditions to create unique instantaneous evolutions of the flow field. Each realization is then used to calculate statistical quantities. Provided each instance is sufficiently de-correlated, this approach potentially allows considerable reduction in the time to solution beyond the strong scaling limit for a given accuracy. This study focuses on the theory and implementation of the methodology in Nek5000, a massively parallelmore » open-source spectral element code.« less
A strictly Markovian expansion for plasma turbulence theory
NASA Technical Reports Server (NTRS)
Jones, F. C.
1976-01-01
The collision operator that appears in the equation of motion for a particle distribution function that was averaged over an ensemble of random Hamiltonians is non-Markovian. It is non-Markovian in that it involves a propagated integral over the past history of the ensemble averaged distribution function. All formal expansions of this nonlinear collision operator to date preserve this non-Markovian character term by term yielding an integro-differential equation that must be converted to a diffusion equation by an additional approximation. An expansion is derived for the collision operator that is strictly Markovian to any finite order and yields a diffusion equation as the lowest nontrivial order. The validity of this expansion is seen to be the same as that of the standard quasilinear expansion.
NASA Astrophysics Data System (ADS)
Lipenkov, V.; Raynaud, D.; Loutre, M.-F.; Duval, P.; Lemieux-Dudon, B.
2009-04-01
An accurate chronology of ice cores is needed for interpreting the paleoclimatic record and understanding the relation between insolation and climate. A new domain of research in this area has been initially stimulated by the work of M. Bender (2002) linking the record of O2/N2 ratio in the air trapped in the Vostok ice with the local insolation. More recently, it has been proposed that the long-term changes in air content, V, recorded in ice from the high Antarctic plateau is also dominantly imprinted by the local summer insolation (Raynaud et al., 2007). The present paper presents a new V record from Vostok, which is compared with the published Vostok O2/N2 record for the same period of time (150-400 ka BP) by using the same spectral analysis methods. The spectral differences between the two properties and the possible mechanisms linking them with insolation through the surface snow structure and the close-off processes are discussed. The main result of our study is that the two experimentally independent local insolation proxies lead to absolute (orbital) time scales, which agree together within a standard deviation of 0.6 ka. This result strongly adds credibility to the air content of ice and the O2 to N2 ratio of the air trapped in ice as equally reliable and complementary tools for accurate dating of existing and future deep ice cores. References: M. Bender, Orbital tuning chronology for the Vostok climate record supported by trapped gas composition, Earth and Planetary Science Letters 204(2002) 275-289. D. Raynaud, V. Lipenkov, B. Lemieux-Dudon, P. Duval, M.F. Loutre, N. Lhomme, The local insolation signature of air content in Antarctic ice: a new step toward an absolute dating of ice records, Earth and Planetary Science Letters 261(2007) 337-349.
Lewinson, Ryan T; Collins, Kelsey H; Vallerand, Isabelle A; Wiley, J Preston; Woodhouse, Linda J; Reimer, Raylene A; Worobets, Jay T; Herzog, Walter; Stefanyshyn, Darren J
2014-12-03
Knee osteoarthritis (OA) progression has been linked to increased peak external knee adduction moments (KAMs). Although some trials have attempted to reduce pain and improve function in OA by reducing KAMs with a wedged footwear insole intervention, KAM reduction has not been specifically controlled for in trial designs, potentially explaining the mixed results seen in the literature. Therefore, the primary purpose of this trial is to identify the effects of reduced KAMs on knee OA pain and function. Forty-six patients with radiographically confirmed diagnosis medial knee OA will be recruited for this 3 month randomized controlled trial. Recruitment will be from Alberta and surrounding areas. Eligibility criteria include being between the ages of 40 and 85 years, have knee OA primarily localized to the medial tibiofemoral compartment, based on the American College of Rheumatology diagnostic criteria and be classified as having a Kellgren-Lawrence grade of 1 to 3. Patients will visit the laboratory at baseline for testing that includes dual x-ray absorptiometry, biomechanical testing, and surveys (KOOS, PASE activity scale, UCLA activity scale, comfort visual analog scale). At baseline, patients will be randomized to either a wedged insole group to reduce KAMs, or a waitlist control group where no intervention is provided. The survey tests will be repeated at 3 months, and response to wedged insoles over 3 months will be evaluated. This study represents the first step in systematically evaluating the effects of reduced KAMs on knee OA management by using a patient-specific wedged insole prescription procedure rather than providing the same insole to all patients. The results of this trial will provide indications as to whether reduced KAMs are an effective strategy for knee OA management, and whether a personalized approach to footwear insole prescription is warranted. NCT02067208.
NASA Astrophysics Data System (ADS)
Grant, Katharine; Grimm, Rosina; Mikolajewicz, Uwe; Marino, Gianluca; Rohling, Eelco
2016-04-01
The periodic deposition of organic rich layers or 'sapropels' in eastern Mediterranean sediments can be linked to orbital-driven changes in the strength and location of (east) African monsoon precipitation. Sapropels are therefore an extremely useful tool for establishing orbital chronologies, and for providing insights about African monsoon variability on long timescales. However, the link between sapropel formation, insolation variations, and African monsoon 'maxima' is not straightforward because other processes (notably, sea-level rise) may have contributed to their deposition, and because there are uncertainties about monsoon-sapropel phase relationships. For example, different phasings are observed between Holocene and early Pleistocene sapropels, and between proxy records and model simulations. To address these issues, we have established geochemical and ice-volume-corrected planktonic foraminiferal stable isotope records for sapropels S1, S3, S4, and S5 in core LC21 from the southern Aegean Sea. The records have a radiometrically constrained chronology that has already been synchronised with the Red Sea relative sea-level record, and this allows us to examine in detail the timing of sapropel deposition relative to insolation, sea-level, and African monsoon changes. Our records suggest that the onset of sapropel deposition and monsoon run-off was near synchronous, yet insolation-sapropel/monsoon phasings varied, whereby monsoon/sapropel onset was relatively delayed (with respect to insolation maxima) after glacial terminations. We suggest that large meltwater discharges into the North Atlantic modified the timing of sapropel deposition by delaying the timing of peak African monsoon run-off. Hence, the previous assumption of a systematic 3-kyr lag between insolation maxima and sapropel midpoints may lead to overestimated insolation-sapropel phasings. We also surmise that both monsoon run-off and sea-level rise were important buoyancy-forcing mechanisms for the studied sapropels, and their relative influences differed per sapropel case. For instance, sea-level rise was clearly important for sapropel S1, whereas monsoon forcing was likely more important for sapropel S5.
Insolation-driven 100,000-year glacial cycles and hysteresis of ice-sheet volume.
Abe-Ouchi, Ayako; Saito, Fuyuki; Kawamura, Kenji; Raymo, Maureen E; Okuno, Jun'ichi; Takahashi, Kunio; Blatter, Heinz
2013-08-08
The growth and reduction of Northern Hemisphere ice sheets over the past million years is dominated by an approximately 100,000-year periodicity and a sawtooth pattern (gradual growth and fast termination). Milankovitch theory proposes that summer insolation at high northern latitudes drives the glacial cycles, and statistical tests have demonstrated that the glacial cycles are indeed linked to eccentricity, obliquity and precession cycles. Yet insolation alone cannot explain the strong 100,000-year cycle, suggesting that internal climatic feedbacks may also be at work. Earlier conceptual models, for example, showed that glacial terminations are associated with the build-up of Northern Hemisphere 'excess ice', but the physical mechanisms underpinning the 100,000-year cycle remain unclear. Here we show, using comprehensive climate and ice-sheet models, that insolation and internal feedbacks between the climate, the ice sheets and the lithosphere-asthenosphere system explain the 100,000-year periodicity. The responses of equilibrium states of ice sheets to summer insolation show hysteresis, with the shape and position of the hysteresis loop playing a key part in determining the periodicities of glacial cycles. The hysteresis loop of the North American ice sheet is such that after inception of the ice sheet, its mass balance remains mostly positive through several precession cycles, whose amplitudes decrease towards an eccentricity minimum. The larger the ice sheet grows and extends towards lower latitudes, the smaller is the insolation required to make the mass balance negative. Therefore, once a large ice sheet is established, a moderate increase in insolation is sufficient to trigger a negative mass balance, leading to an almost complete retreat of the ice sheet within several thousand years. This fast retreat is governed mainly by rapid ablation due to the lowered surface elevation resulting from delayed isostatic rebound, which is the lithosphere-asthenosphere response. Carbon dioxide is involved, but is not determinative, in the evolution of the 100,000-year glacial cycles.
Measurement of pressure walking in footwear used in leprosy.
Birke, J A; Foto, J G; Deepak, S; Watson, J
1994-09-01
Pressure measurements were made on 10 leprosy patients while walking barefoot and while using 6 sample shoes. The sample shoes, which represented footwear currently used worldwide in leprosy programmes, included: 1, a USA extradepth shoe without insole; 2, a USA extradepth shoe with insole; 3, a Chinese tennis shoe; 4, a Mozambique sandal; 5, a Bombay sandal; 6, a Bombay sandal with rigid sole; and 7, the patients' prescribed footwear. Peak pressure was significantly lower while walking in all footwear, except with the extradepth shoe without an insole, when compared to barefoot walking. Peak pressure was significantly lower walking in the Bombay sandals, the Chinese tennis shoe, the extradepth shoe with an insert and the patients' prescribed shoe when compared to the extradepth shoe without an insert. Regression analysis showed a significant inverse relationship between pressure and insole thickness (P < 0.001, R2 = 0.17).
Urban air pollution and solar energy
NASA Technical Reports Server (NTRS)
Gammon, R. B.; Huning, J. R.; Reid, M. S.; Smith, J. H.
1981-01-01
The design and performance of solar energy systems for many potential applications (industrial/residential heat, electricity generation by solar concentration and photovoltaics) will be critically affected by local insolation conditions. The effects of urban air pollution are considered and reviewed. A study of insolation data for Alhambra, California (9 km south of Pasadena) shows that, during a recent second-stage photochemical smog alert (greater than or equal to 0.35 ppm ozone), the direct-beam insolation at solar noon was reduced by 40%, and the total global by 15%, from clean air values. Similar effects have been observed in Pasadena, and are attributable primarily to air pollution. Effects due to advecting smog have been detected 200 km away, in the Mojave Desert. Preliminary performance and economic simulations of solar thermal and photovoltaic power systems indicate increasing nonlinear sensitivity of life cycle plant cost to reductions in insolation levels due to pollution.
NASA Astrophysics Data System (ADS)
Pollard, D.; Chang, W.; Haran, M.; Applegate, P.; DeConto, R.
2015-11-01
A 3-D hybrid ice-sheet model is applied to the last deglacial retreat of the West Antarctic Ice Sheet over the last ~ 20 000 years. A large ensemble of 625 model runs is used to calibrate the model to modern and geologic data, including reconstructed grounding lines, relative sea-level records, elevation-age data and uplift rates, with an aggregate score computed for each run that measures overall model-data misfit. Two types of statistical methods are used to analyze the large-ensemble results: simple averaging weighted by the aggregate score, and more advanced Bayesian techniques involving Gaussian process-based emulation and calibration, and Markov chain Monte Carlo. Results for best-fit parameter ranges and envelopes of equivalent sea-level rise with the simple averaging method agree quite well with the more advanced techniques, but only for a large ensemble with full factorial parameter sampling. Best-fit parameter ranges confirm earlier values expected from prior model tuning, including large basal sliding coefficients on modern ocean beds. Each run is extended 5000 years into the "future" with idealized ramped climate warming. In the majority of runs with reasonable scores, this produces grounding-line retreat deep into the West Antarctic interior, and the analysis provides sea-level-rise envelopes with well defined parametric uncertainty bounds.
NASA Astrophysics Data System (ADS)
Lourens, L. J.; Konijnendijk, T.; Ziegler, M.
2015-12-01
We present the first long (~1.2 Ma) benthic oxygen isotope record from the eastern Mediterranean, based on ODP Sites 967 and 968, which clearly reflects the behavior of global climate on a glacial-interglacial scale. The age model for our record is based on tuning the elemental ratio of titanium versus aluminum (Ti/Al) against insolation. The Ti/Al record is dominated by the precession-related changes in northern African climate, i.e. monsoonal forcing, and hence largely independent of glacial-interglacial variability. We found the largest offset between our chronology and that of the widely applied, open ocean stacked record LR04 (Lisiecki and Raymo, 2005) for TVII (~624 ka), which occurred ~9 kyr earlier according to our estimates, though in agreement with the AICC2012 δDice chronology of EPICA Dome C (Bazin et al., 2013). Spectral cross-correlation analysis between our benthic δ18O record and 65°N summer insolation reveals significant amounts of power in the obliquity and precession range, with an average lag of 5.5±0.8 kyr for obliquity, and 6.0±1.0 kyr for precession. In addition, our results show that the obliquity-related time lag was smaller (3.0±3.3 kyr) prior to ~900 ka than after (5.7±1.1 kyr), suggesting that on average the glacial response time to obliquity forcing increased during the mid-Pleistocene transition, much later than assumed by Lisiecki and Raymo (2005). Finally, we found that almost all glacial terminations have a consistent phase relationship of ~45±45 degrees with respect to the precession and obliquity-driven increases in 65°N summer insolation, consistent with the general consensus that both obliquity and precession are important for deglaciation during the Late Pleistocene. Exceptions are glacial terminations TIIIb, T36 and potentially T32 (and TVII T24 and T34), which show this consistent phase relationship only with precession (only with obliquity). Our findings point towards an early (>1200 ka) onset of the Mid Pleistocene Transition. Vice versa, the timing of TVII, which can only be explained as a response to obliquity forcing, indicates that the transition lasted until at least after MIS 15.
Impact of sunlight on the age of onset of bipolar disorder
Bauer, Michael; Glenn, Tasha; Alda, Martin; Andreassen, Ole A; Ardau, Raffaella; Bellivier, Frank; Berk, Michael; Bjella, Thomas D; Bossini, Letizia; Zompo, Maria Del; Dodd, Seetal; Fagiolini, Andrea; Frye, Mark A; Gonzalez-Pinto, Ana; Henry, Chantal; Kapczinski, Flávio; Kliwicki, Sebastian; König, Barbara; Kunz, Mauricio; Lafer, Beny; Lopez-Jaramillo, Carlos; Manchia, Mirko; Marsh, Wendy; Martinez-Cengotitabengoa, Mónica; Melle, Ingrid; Morken, Gunnar; Munoz, Rodrigo; Nery, Fabiano G; O’Donovan, Claire; Pfennig, Andrea; Quiroz, Danilo; Rasgon, Natalie; Reif, Andreas; Rybakowski, Janusz; Sagduyu, Kemal; Simhandl, Christian; Torrent, Carla; Vieta, Eduard; Zetin, Mark; Whybrow, Peter C
2012-01-01
Objective Although bipolar disorder has high heritability, the onset occurs during several decades of life, suggesting that social and environmental factors may have considerable influence on disease onset. This study examined the association between the age of onset and sunlight at the location of onset. Method Data were obtained from 2414 patients with a diagnosis of bipolar I disorder, according to DSM-IV criteria. Data were collected at 24 sites in 13 countries spanning latitudes 6.3 to 63.4 degrees from the equator, including data from both hemispheres. The age of onset and location of onset were obtained retrospectively, from patient records and/or direct interviews. Solar insolation data, or the amount of electromagnetic energy striking the surface of the earth, were obtained from the NASA Surface Meteorology and Solar Energy (SSE) database for each location of onset. Results The larger the maximum monthly increase in solar insolation at the location of onset, the younger the age of onset (coefficient= −4.724, 95% CI: −8.124 to −1.323, p = 0.006), controlling for each country’s median age. The maximum monthly increase in solar insolation occurred in springtime. No relationships were found between the age of onset and latitude, yearly total solar insolation, and the maximum monthly decrease in solar insolation. The largest maximum monthly increases in solar insolation occurred in diverse environments, including Norway, arid areas in California, and Chile. Conclusion The large maximum monthly increase in sunlight in springtime may have an important influence on the onset of bipolar disorder. PMID:22612720
Modelling dynamics in protein crystal structures by ensemble refinement
Burnley, B Tom; Afonine, Pavel V; Adams, Paul D; Gros, Piet
2012-01-01
Single-structure models derived from X-ray data do not adequately account for the inherent, functionally important dynamics of protein molecules. We generated ensembles of structures by time-averaged refinement, where local molecular vibrations were sampled by molecular-dynamics (MD) simulation whilst global disorder was partitioned into an underlying overall translation–libration–screw (TLS) model. Modeling of 20 protein datasets at 1.1–3.1 Å resolution reduced cross-validated Rfree values by 0.3–4.9%, indicating that ensemble models fit the X-ray data better than single structures. The ensembles revealed that, while most proteins display a well-ordered core, some proteins exhibit a ‘molten core’ likely supporting functionally important dynamics in ligand binding, enzyme activity and protomer assembly. Order–disorder changes in HIV protease indicate a mechanism of entropy compensation for ordering the catalytic residues upon ligand binding by disordering specific core residues. Thus, ensemble refinement extracts dynamical details from the X-ray data that allow a more comprehensive understanding of structure–dynamics–function relationships. DOI: http://dx.doi.org/10.7554/eLife.00311.001 PMID:23251785
Selecting a Classification Ensemble and Detecting Process Drift in an Evolving Data Stream
DOE Office of Scientific and Technical Information (OSTI.GOV)
Heredia-Langner, Alejandro; Rodriguez, Luke R.; Lin, Andy
2015-09-30
We characterize the commercial behavior of a group of companies in a common line of business using a small ensemble of classifiers on a stream of records containing commercial activity information. This approach is able to effectively find a subset of classifiers that can be used to predict company labels with reasonable accuracy. Performance of the ensemble, its error rate under stable conditions, can be characterized using an exponentially weighted moving average (EWMA) statistic. The behavior of the EWMA statistic can be used to monitor a record stream from the commercial network and determine when significant changes have occurred. Resultsmore » indicate that larger classification ensembles may not necessarily be optimal, pointing to the need to search the combinatorial classifier space in a systematic way. Results also show that current and past performance of an ensemble can be used to detect when statistically significant changes in the activity of the network have occurred. The dataset used in this work contains tens of thousands of high level commercial activity records with continuous and categorical variables and hundreds of labels, making classification challenging.« less
A benchmark for reaction coordinates in the transition path ensemble
2016-01-01
The molecular mechanism of a reaction is embedded in its transition path ensemble, the complete collection of reactive trajectories. Utilizing the information in the transition path ensemble alone, we developed a novel metric, which we termed the emergent potential energy, for distinguishing reaction coordinates from the bath modes. The emergent potential energy can be understood as the average energy cost for making a displacement of a coordinate in the transition path ensemble. Where displacing a bath mode invokes essentially no cost, it costs significantly to move the reaction coordinate. Based on some general assumptions of the behaviors of reaction and bath coordinates in the transition path ensemble, we proved theoretically with statistical mechanics that the emergent potential energy could serve as a benchmark of reaction coordinates and demonstrated its effectiveness by applying it to a prototypical system of biomolecular dynamics. Using the emergent potential energy as guidance, we developed a committor-free and intuition-independent method for identifying reaction coordinates in complex systems. We expect this method to be applicable to a wide range of reaction processes in complex biomolecular systems. PMID:27059559
Increased aridity at the end of the Eemian in the Levant and relationships to global climate
NASA Astrophysics Data System (ADS)
Kiro, Y.; Goldstein, S. L.; Kushnir, Y.; Lazar, B.; Stein, M.
2016-12-01
Thick layers of halite deposited in the Dead Sea at the end of MIS 5e, revealed by the ICDP Dead Sea Deep Drilling Project cores, indicate extremely arid conditions prevailing in the Levant . Average precipitation during this interval was 50% of the present, and there were strong fluctuations between wetter periods similar to the present-day lasting on the order of millennia, and drought periods with precipitation as low as 20% of the present-day lasting on the order of centuries. At the same time, there were infrequent but intense rainfall events in the southern Levant and flash floods. U-series ages indicate that the hyper-arid conditions prevailed between 120-110 ka, following the `Eemian' Northern Hemisphere insolation peak interval of MIS 5e, and coinciding with decreased high latitude temperatures and atmospheric CO2 (Jouzel et al. 2007, Bereiter et al. 2015). Such conditions are consistent with pollen records from southern Europe indicating that region was warm until 110 ka (Brauer et al., 2007). The hyper-arid interval in the Levant followed a relatively wet period during the Eemian, coinciding with an intense African monsoon and major sapropel deposition in the eastern Mediterranean. Climate models indicate increasing aridity in the Levant between 125 ka and 120 ka; while at 125 ka there was significant summer and winter precipitation, 120 ka was drier than the present. The Levant in the present-day has a Mediterranean climate with dry summers and wet winters, where warmer winters coincide with lower precipitation. While the time interval of 120 ka to 110 ka, following the Eemian, was characterized by decreasing summer insolation, winter insolation increased. This increase in winter insolation may have caused a decrease in the sea-land temperature gradient that resulted in decreased precipitation on land. Bereiter, B. et al., 2015, Antarctic Ice Cores Revised 800KYr CO2 Data Brauer, A et al., 2007, Evidence for last interglacial chronology and environmental change from Southern Europe.: Proceedings of the National Academy of Sciences of the United States of America, v. 104, no. 2, p. 450-455 Jouzel, J. et al., 2007, Orbital and millennial Antarctic climate variability over the past 800,000 years.: Science (New York, N.Y.), v. 317, no. 5839, p. 793-6
Variety of Behavior of Equity Returns in Financial Markets
NASA Astrophysics Data System (ADS)
Bonanno, Giovanni; Lillo, Fabrizio; Mantegna, Rosario N.
2001-03-01
The price dynamics of a set of equities traded in an efficient market is pretty complex. It consists of almost not redundant time series which have (i) long-range correlated volatility and (ii) cross-correlation between each pair of equities. We perform a study of the statistical properties of an ensemble of equities returns which is fruitful to elucidate the nature and role of time and ensemble correlation. Specifically, we investigate a statistical ensemble of daily returns of n equities traded in United States financial markets. For each trading day of our database, we study the ensemble return distribution. We find that a typical ensemble return distribution exists in most of the trading days [1] with the exception of crash and rally days and of the days following to these extreme events [2]. We analyze each ensemble return distribution by extracting its first two central moments. We call the second moment of the ensemble return distribution the variety of the market. We choose this term because high variety implies a variated behavior of the equities returns in the considered day. We observe that the mean return and the variety are fluctuating in time and are stochastic processes themselves. The variety is a long-range correlated stochastic process. Customary time-averaged statistical properties of time series of stock returns are also considered. In general, time-averaged and portfolio-averaged returns have different statistical properties [1]. We infer from these differences information about the relative strength of correlation between equities and between different trading days. We also compare our empirical results with those predicted by the single-index model and we conclude that this simple model is unable to explain the statistical properties of the second moment of the ensemble return distribution. Correlation between pairs of equities are continuously present in the dynamics of a stock portfolio. Hence, it is relevant to investigate pair correlation in a efficient and original way. We propose to investigate these correlations at a daily and intra daily time horizon with a method based on concepts of random frustrated systems. Specifically, a hierarchical organization of the investigated equities is obtained by determining a metric distance between stocks and by investigating the properties of the subdominant ultrametric associated with it [3]. The high-frequency cross-correlation existing between pairs of equities are investigated in a set of 100 stocks traded in US equity markets. The decrease of the cross-correlation between the equity returns observed for diminishing time horizons progressively changes the nature of the hierarchical structure associated to each different time horizon [4]. The nature of the correlation present between pairs of time series of equity returns collected in a portfolio has a strong influence on the variety of the market. We finally discuss the relation between pair correlation and variety of an ensemble return distribution. References [1] Fabrizio Lillo and Rosario N. Mantegna, Variety and volatility in financial markets, Phys. Rev. E 62, 6126-6134 (2000). [2] Fabrizio Lillo and Rosario N. Mantegna, Symmetry alteration of ensemble return distribution in crash and rally days of financial market, Eur. Phys. J. B 15, 603-606 (2000). [3] Rosario N. Mantegna, Hierarchical structure in financial markets, Eur. Phys. J. B 11, 193-197 (1999). [4] Giovanni Bonanno, Fabrizio Lillo, and Rosario N. Mantegna, High-frequency cross-correlation in a set of stocks, Quantitative Finance (in press).
Hatton, Anna L; Dixon, John; Rome, Keith; Brauer, Sandra G; Williams, Katrina; Kerr, Graham
2016-04-21
Many people with multiple sclerosis experience problems with walking, which can make daily activities difficult and often leads to falls. Foot sensation plays an important role in keeping the body balanced whilst walking; however, people with multiple sclerosis often have poor sensation on the soles of their feet. Wearing a specially designed shoe insole, which enhances plantar sensory information, could help people with multiple sclerosis to walk better. This study will explore whether long-term wear of a textured insole can improve walking in people with multiple sclerosis. A prospective randomised controlled trial with two parallel groups will be conducted aiming to recruit 176 people with multiple sclerosis living in the community (Brisbane, Australia). Adults with a clinical diagnosis of multiple sclerosis, Disease Steps score 1-4, who are ambulant over 100 m and who meet specific inclusion criteria will be recruited. Participants will be randomised to a smooth control insole (n = 88) or textured insole (n = 88) group. The allocated insole will be worn for 12-weeks within participants' own footwear, with self-report wear diaries and falls calendars being completed over this period. Blinded assessors will conduct two baseline assessments and one post-intervention assessment. Gait tasks will be completed barefoot, wearing standardised footwear only, and wearing standardised footwear with smooth and textured insoles. The primary outcome measure will be mediolateral base of support when walking over even and uneven surfaces. Secondary measures include spatiotemporal gait parameters (stride length, stride time variability, double-limb support time, velocity), gait kinematics (hip, knee, and ankle joint angles, toe clearance, trunk inclination, arm swing, mediolateral pelvis/head displacement), foot sensation (light touch-pressure, vibration, two-point discrimination) and proprioception (ankle joint position sense). Group allocation will be concealed and all analyses will be based on an intention-to-treat principle. This study will explore the effects of wearing textured insoles over 12-weeks on gait, foot sensation and proprioception in people with multiple sclerosis. The study has the potential to identify a new, evidence-based footwear intervention which has the capacity to enhance mobility and independent living in people with multiple sclerosis. Australian New Zealand Clinical Trials Registry ACTRN12615000421538 . Registered 4 May 2015.
Lee, Hyunwoo; Lee, Hana; Whang, Mincheol
2018-01-15
Continuous cardiac monitoring has been developed to evaluate cardiac activity outside of clinical environments due to the advancement of novel instruments. Seismocardiography (SCG) is one of the vital components that could develop such a monitoring system. Although SCG has been presented with a lower accuracy, this novel cardiac indicator has been steadily proposed over traditional methods such as electrocardiography (ECG). Thus, it is necessary to develop an enhanced method by combining the significant cardiac indicators. In this study, the six-axis signals of accelerometer and gyroscope were measured and integrated by the L2 normalization and multi-dimensional kineticardiography (MKCG) approaches, respectively. The waveforms of accelerometer and gyroscope were standardized and combined via ensemble averaging, and the heart rate was calculated from the dominant frequency. Thirty participants (15 females) were asked to stand or sit in relaxed and aroused conditions. Their SCG was measured during the task. As a result, proposed method showed higher accuracy than traditional SCG methods in all measurement conditions. The three main contributions are as follows: (1) the ensemble averaging enhanced heart rate estimation with the benefits of the six-axis signals; (2) the proposed method was compared with the previous SCG method that employs fewer-axis; and (3) the method was tested in various measurement conditions for a more practical application.
Measurements of wind-waves under transient wind conditions.
NASA Astrophysics Data System (ADS)
Shemer, Lev; Zavadsky, Andrey
2015-11-01
Wind forcing in nature is always unsteady, resulting in a complicated evolution pattern that involves numerous time and space scales. In the present work, wind waves in a laboratory wind-wave flume are studied under unsteady forcing`. The variation of the surface elevation is measured by capacitance wave gauges, while the components of the instantaneous surface slope in across-wind and along-wind directions are determined by a regular or scanning laser slope gauge. The locations of the wave gauge and of the laser slope gauge are separated by few centimeters in across-wind direction. Instantaneous wind velocity was recorded simultaneously using Pitot tube. Measurements are performed at a number of fetches and for different patterns of wind velocity variation. For each case, at least 100 independent realizations were recorded for a given wind velocity variation pattern. The accumulated data sets allow calculating ensemble-averaged values of the measured parameters. Significant differences between the evolution patterns of the surface elevation and of the slope components were found. Wavelet analysis was applied to determine dominant wave frequency of the surface elevation and of the slope variation at each instant. Corresponding ensemble-averaged values acquired by different sensors were computed and compared. Analysis of the measured ensemble-averaged quantities at different fetches makes it possible to identify different stages in the wind-wave evolution and to estimate the appropriate time and length scales.
Smith, B J; Yamaguchi, E; Gaver, D P
2010-01-01
We have designed, fabricated and evaluated a novel translating stage system (TSS) that augments a conventional micro particle image velocimetry (µ-PIV) system. The TSS has been used to enhance the ability to measure flow fields surrounding the tip of a migrating semi-infinite bubble in a glass capillary tube under both steady and pulsatile reopening conditions. With conventional µ-PIV systems, observations near the bubble tip are challenging because the forward progress of the bubble rapidly sweeps the air-liquid interface across the microscopic field of view. The translating stage mechanically cancels the mean bubble tip velocity, keeping the interface within the microscope field of view and providing a tenfold increase in data collection efficiency compared to fixed-stage techniques. This dramatic improvement allows nearly continuous observation of the flow field over long propagation distances. A large (136-frame) ensemble-averaged velocity field recorded with the TSS near the tip of a steadily migrating bubble is shown to compare well with fixed-stage results under identical flow conditions. Use of the TSS allows the ensemble-averaged measurement of pulsatile bubble propagation flow fields, which would be practically impossible using conventional fixed-stage techniques. We demonstrate our ability to analyze these time-dependent two-phase flows using the ensemble-averaged flow field at four points in the oscillatory cycle.
Improved estimation of anomalous diffusion exponents in single-particle tracking experiments
NASA Astrophysics Data System (ADS)
Kepten, Eldad; Bronshtein, Irena; Garini, Yuval
2013-05-01
The mean square displacement is a central tool in the analysis of single-particle tracking experiments, shedding light on various biophysical phenomena. Frequently, parameters are extracted by performing time averages on single-particle trajectories followed by ensemble averaging. This procedure, however, suffers from two systematic errors when applied to particles that perform anomalous diffusion. The first is significant at short-time lags and is induced by measurement errors. The second arises from the natural heterogeneity in biophysical systems. We show how to estimate and correct these two errors and improve the estimation of the anomalous parameters for the whole particle distribution. As a consequence, we manage to characterize ensembles of heterogeneous particles even for rather short and noisy measurements where regular time-averaged mean square displacement analysis fails. We apply this method to both simulations and in vivo measurements of telomere diffusion in 3T3 mouse embryonic fibroblast cells. The motion of telomeres is found to be subdiffusive with an average exponent constant in time. Individual telomere exponents are normally distributed around the average exponent. The proposed methodology has the potential to improve experimental accuracy while maintaining lower experimental costs and complexity.
Interactions between moist heating and dynamics in atmospheric predictability
DOE Office of Scientific and Technical Information (OSTI.GOV)
Straus, D.M.; Huntley, M.A.
1994-02-01
The predictability properties of a fixed heating version of a GCM in which the moist heating is specified beforehand are studied in a series of identical twin experiments. Comparison is made to an identical set of experiments using the control GCM, a five-level R30 version of the COLA GCM. The experiments each contain six ensembles, with a single ensemble consisting of six 30-day integrations starting from slightly perturbed Northern Hemisphere wintertime initial conditions. The moist heating from each integration within a single control ensemble was averaged over the ensemble. This averaged heating (a function of three spatial dimensions and time)more » was used as the prespecified heating in each member of the corresponding fixed heating ensemble. The errors grow less rapidly in the fixed heating case. The most rapidly growing scales at small times (global wavenumber 6) have doubling times of 3.2 days compared to 2.4 days for the control experiments. The predictability times for the most energetic scales (global wavenumbers 9-12) are about two weeks for the fixed heating experiments, compared to 9 days for the control. The ratio of error energy in the fixed heating to the control case falls below 0.5 by day 8, and then gradually increases as the error growth slows in the control case. The growth of errors is described in terms of budgets of error kinetic energy (EKE) and error available potential energy (EAPE) developed in terms of global wavenumber n. The diabatic generation of EAPE (G[sub APE]) is positive in the control case and is dominated by midlatitude heating errors after day 2. The fixed heating G[sub APE] is negative at all times due to longwave radiative cooling. 36 refs., 9 figs., 1 tab.« less
NASA Astrophysics Data System (ADS)
Liu, Junjie; Fung, Inez; Kalnay, Eugenia; Kang, Ji-Sun; Olsen, Edward T.; Chen, Luke
2012-03-01
This study is our first step toward the generation of 6 hourly 3-D CO2 fields that can be used to validate CO2 forecast models by combining CO2 observations from multiple sources using ensemble Kalman filtering. We discuss a procedure to assimilate Atmospheric Infrared Sounder (AIRS) column-averaged dry-air mole fraction of CO2 (Xco2) in conjunction with meteorological observations with the coupled Local Ensemble Transform Kalman Filter (LETKF)-Community Atmospheric Model version 3.5. We examine the impact of assimilating AIRS Xco2 observations on CO2 fields by comparing the results from the AIRS-run, which assimilates both AIRS Xco2 and meteorological observations, to those from the meteor-run, which only assimilates meteorological observations. We find that assimilating AIRS Xco2 results in a surface CO2 seasonal cycle and the N-S surface gradient closer to the observations. When taking account of the CO2 uncertainty estimation from the LETKF, the CO2 analysis brackets the observed seasonal cycle. Verification against independent aircraft observations shows that assimilating AIRS Xco2 improves the accuracy of the CO2 vertical profiles by about 0.5-2 ppm depending on location and altitude. The results show that the CO2 analysis ensemble spread at AIRS Xco2 space is between 0.5 and 2 ppm, and the CO2 analysis ensemble spread around the peak level of the averaging kernels is between 1 and 2 ppm. This uncertainty estimation is consistent with the magnitude of the CO2 analysis error verified against AIRS Xco2 observations and the independent aircraft CO2 vertical profiles.
Transient aging in fractional Brownian and Langevin-equation motion.
Kursawe, Jochen; Schulz, Johannes; Metzler, Ralf
2013-12-01
Stochastic processes driven by stationary fractional Gaussian noise, that is, fractional Brownian motion and fractional Langevin-equation motion, are usually considered to be ergodic in the sense that, after an algebraic relaxation, time and ensemble averages of physical observables coincide. Recently it was demonstrated that fractional Brownian motion and fractional Langevin-equation motion under external confinement are transiently nonergodic-time and ensemble averages behave differently-from the moment when the particle starts to sense the confinement. Here we show that these processes also exhibit transient aging, that is, physical observables such as the time-averaged mean-squared displacement depend on the time lag between the initiation of the system at time t=0 and the start of the measurement at the aging time t(a). In particular, it turns out that for fractional Langevin-equation motion the aging dependence on t(a) is different between the cases of free and confined motion. We obtain explicit analytical expressions for the aged moments of the particle position as well as the time-averaged mean-squared displacement and present a numerical analysis of this transient aging phenomenon.
Stresses and elastic constants of crystalline sodium, from molecular dynamics
DOE Office of Scientific and Technical Information (OSTI.GOV)
Schiferl, S.K.
1985-02-01
The stresses and the elastic constants of bcc sodium are calculated by molecular dynamics (MD) for temperatures to T = 340K. The total adiabatic potential of a system of sodium atoms is represented by pseudopotential model. The resulting expression has two terms: a large, strictly volume-dependent potential, plus a sum over ion pairs of a small, volume-dependent two-body potential. The stresses and the elastic constants are given as strain derivatives of the Helmholtz free energy. The resulting expressions involve canonical ensemble averages (and fluctuation averages) of the position and volume derivatives of the potential. An ensemble correction relates the resultsmore » to MD equilibrium averages. Evaluation of the potential and its derivatives requires the calculation of integrals with infinite upper limits of integration, and integrand singularities. Methods for calculating these integrals and estimating the effects of integration errors are developed. A method is given for choosing initial conditions that relax quickly to a desired equilibrium state. Statistical methods developed earlier for MD data are extended to evaluate uncertainties in fluctuation averages, and to test for symmetry. 45 refs., 10 figs., 4 tabs.« less
Solar insolation in springtime influences age of onset of bipolar I disorder.
Bauer, M; Glenn, T; Alda, M; Aleksandrovich, M A; Andreassen, O A; Angelopoulos, E; Ardau, R; Ayhan, Y; Baethge, C; Bharathram, S R; Bauer, R; Baune, B T; Becerra-Palars, C; Bellivier, F; Belmaker, R H; Berk, M; Bersudsky, Y; Bicakci, Ş; Birabwa-Oketcho, H; Bjella, T D; Bossini, L; Cabrera, J; Cheung, E Y W; Del Zompo, M; Dodd, S; Donix, M; Etain, B; Fagiolini, A; Fountoulakis, K N; Frye, M A; Gonzalez-Pinto, A; Gottlieb, J F; Grof, P; Harima, H; Henry, C; Isometsä, E T; Janno, S; Kapczinski, F; Kardell, M; Khaldi, S; Kliwicki, S; König, B; Kot, T L; Krogh, R; Kunz, M; Lafer, B; Landén, M; Larsen, E R; Lewitzka, U; Licht, R W; Lopez-Jaramillo, C; MacQueen, G; Manchia, M; Marsh, W; Martinez-Cengotitabengoa, M; Melle, I; Meza-Urzúa, F; Yee Ming, M; Monteith, S; Morken, G; Mosca, E; Munoz, R; Mythri, S V; Nacef, F; Nadella, R K; Nery, F G; Nielsen, R E; O'Donovan, C; Omrani, A; Osher, Y; Østermark Sørensen, H; Ouali, U; Pica Ruiz, Y; Pilhatsch, M; Pinna, M; da Ponte, F D R; Quiroz, D; Ramesar, R; Rasgon, N; Reddy, M S; Reif, A; Ritter, P; Rybakowski, J K; Sagduyu, K; Scippa, Â M; Severus, E; Simhandl, C; Stein, D J; Strejilevich, S; Subramaniam, M; Sulaiman, A H; Suominen, K; Tagata, H; Tatebayashi, Y; Tondo, L; Torrent, C; Vaaler, A E; Veeh, J; Vieta, E; Viswanath, B; Yoldi-Negrete, M; Zetin, M; Zgueb, Y; Whybrow, P C
2017-12-01
To confirm prior findings that the larger the maximum monthly increase in solar insolation in springtime, the younger the age of onset of bipolar disorder. Data were collected from 5536 patients at 50 sites in 32 countries on six continents. Onset occurred at 456 locations in 57 countries. Variables included solar insolation, birth-cohort, family history, polarity of first episode and country physician density. There was a significant, inverse association between the maximum monthly increase in solar insolation at the onset location, and the age of onset. This effect was reduced in those without a family history of mood disorders and with a first episode of mania rather than depression. The maximum monthly increase occurred in springtime. The youngest birth-cohort had the youngest age of onset. All prior relationships were confirmed using both the entire sample, and only the youngest birth-cohort (all estimated coefficients P < 0.001). A large increase in springtime solar insolation may impact the onset of bipolar disorder, especially with a family history of mood disorders. Recent societal changes that affect light exposure (LED lighting, mobile devices backlit with LEDs) may influence adaptability to a springtime circadian challenge. © 2017 John Wiley & Sons A/S. Published by John Wiley & Sons Ltd.
Noll, Christine; Steitz, Vanessa; Daentzer, Dorothea
2017-01-01
Proprioceptive insoles are known to influence the functions of posture and gait by modulations of the sensory structures at the sole of the foot. Literature has shown that they could improve the position of the upper-body in patients with postural complaints of the musculoskeletal system. The aim of this study was to evaluate the influence of proprioceptive insoles on the spinal curvature in patients with slight idiopathic scoliosis. Eighteen patients were included in this prospective, single-centre, randomized study. All patients needed to have a relevant growth potential and suffered from a slight idiopathic scoliosis. Two groups were used, where group 1 performed physiotherapy twice a week, whereas group 2 was additionally supplied with proprioceptive insoles. Patients underwent three-dimensional rasterstereography for back-shape analysis. Furthermore, a conventional x-ray imaging of the spine was performed at the beginning and 1 year later to document the curvatures. There was no statistical difference in the Cobb angles, and in almost all parameters of the rasterstereography, there was no statistically significant change between and within both groups. According to the results of this study, there was no evidence of any statistical significant effect of proprioceptive insoles on spinal curvature in patients with slight idiopathic scoliosis.
Shoe-Insole Technology for Injury Prevention in Walking
Nagano, Hanatsu
2018-01-01
Impaired walking increases injury risk during locomotion, including falls-related acute injuries and overuse damage to lower limb joints. Gait impairments seriously restrict voluntary, habitual engagement in injury prevention activities, such as recreational walking and exercise. There is, therefore, an urgent need for technology-based interventions for gait disorders that are cost effective, willingly taken-up, and provide immediate positive effects on walking. Gait control using shoe-insoles has potential as an effective population-based intervention, and new sensor technologies will enhance the effectiveness of these devices. Shoe-insole modifications include: (i) ankle joint support for falls prevention; (ii) shock absorption by utilising lower-resilience materials at the heel; (iii) improving reaction speed by stimulating cutaneous receptors; and (iv) preserving dynamic balance via foot centre of pressure control. Using sensor technology, such as in-shoe pressure measurement and motion capture systems, gait can be precisely monitored, allowing us to visualise how shoe-insoles change walking patterns. In addition, in-shoe systems, such as pressure monitoring and inertial sensors, can be incorporated into the insole to monitor gait in real-time. Inertial sensors coupled with in-shoe foot pressure sensors and global positioning systems (GPS) could be used to monitor spatiotemporal parameters in real-time. Real-time, online data management will enable ‘big-data’ applications to everyday gait control characteristics. PMID:29738486
House, Carol; Reece, Allyson; Roiz de Sa, Dan
2013-06-01
This study was undertaken to determine whether the incidence of lower limb overuse injuries (LLOIs) sustained during Royal Marine training could be reduced by issuing the recruits with shock-absorbing insoles (SAIs) to wear in their military boots. This was a retrospective longitudinal trial conducted in two phases. Injury data from 1,416 recruits issued with standard Saran insoles and 1,338 recruits issued with SAI were compared. The recruits in the two groups were of similar height, body mass, and aerobic fitness and followed the same training course. The incidence of LLOI sustained by the recruits was lower (p < 0.05) in the SAI Group (19.0%) compared to the Saran Insole Group (31.7%). The incidences of lower limb stress fractures, tibial periostitis, tenosynovitis of foot, achilles tendonopathy, other tendonopathy and anterior knee pain were lower (p < 0.05) in the SAI Group. Tibial stress fracture incidence was lower (p < 0.05) in the SAI Group but metatarsal and femoral stress fracture incidences were the same for the two insole groups. Thus, issuing SAIs to military recruits undertaking a sustained, arduous physical training program with a high incidence of LLOI would provide a beneficial reduction in the incidence of LLOI. Reprint & Copyright © 2013 Association of Military Surgeons of the U.S.
How to Make Eccentricity Cycles in Stratigraphy: the Role of Compaction
NASA Astrophysics Data System (ADS)
Liu, W.; Hinnov, L.; Wu, H.; Pas, D.
2017-12-01
Milankovitch cycles from astronomically driven climate variations have been demonstrated as preserved in cyclostratigraphy throughout geologic time. These stratigraphic cycles have been identified in many types of proxies, e.g., gamma ray, magnetic susceptibility, oxygen isotopes, carbonate content, grayscale, etc. However, the commonly prominent spectral power of orbital eccentricity cycles in stratigraphy is paradoxical to insolation, which is dominated by precession index power. How is the spectral power transferred from precession to eccentricity in stratigraphy? Nonlinear sedimentation and bioturbation have long been identified as players in this transference. Here, we propose that in the absence of bioturbation differential compaction can generate the transference. Using insolation time series, we trace the steps by which insolation is transformed into stratigraphy, and how differential compaction of lithology acts to transfer spectral power from precession to eccentricity. Differential compaction is applied to unique values of insolation, which is assumed to control the type of deposited sediment. High compaction is applied to muds, and progressively lower compaction is applied to silts and sands, or carbonate. Linear differential compaction promotes eccentricity spectral power, but nonlinear differential compaction elevates eccentricity spectral power to dominance and precession spectral power to near collapse as is often observed in real stratigraphy. Keywords: differential compaction, cyclostratigraphy, insolation, eccentricity
Replicating the Ice-Volume Signal of the Early Pleistocene with a Complex Earth System Model
NASA Astrophysics Data System (ADS)
Tabor, C. R.; Poulsen, C. J.; Pollard, D.
2013-12-01
Milankovitch theory proposes high-latitude summer insolation intensity paces the ice ages by controlling perennial snow cover amounts (Milankovitch, 1941). According to theory, the ~21 kyr cycle of precession should dominate the ice-volume records since it has the greatest influence on high-latitude summer insolation. Modeling experiments frequently support Milankovitch theory by attributing the majority of Northern Hemisphere high-latitude summer snowmelt to changes in the cycle of precession (e.g. Jackson and Broccoli, 2003). However, ice-volume proxy records, especially those of the Early Pleistocene (2.6-0.8 Ma), display variability with a period of ~41 kyr (Raymo and Lisiecki, 2005), indicative of insolation forcing from obliquity, which has a much smaller influence on summer insolation intensity than precession. Several hypotheses attempt to explain the discrepancies between Milkankovitch theory and the proxy records by invoking phenomena such as insolation gradients (Raymo and Nisancioglu, 2003), hemispheric offset (Raymo et al., 2006; Lee and Poulsen, 2009), and integrated summer energy (Huybers, 2006); however, all of these hypotheses contain caveats (Ruddiman, 2006) and have yet to be supported by modeling studies that use a complex GCM. To explore potential solutions to this '41 kyr problem,' we use an Earth system model composed of the GENESIS GCM and Land Surface model, the BIOME4 vegetation model, and the Pennsylvania State ice-sheet model. Using an asynchronous coupling technique, we run four idealized transient combinations of obliquity and precession, representing the orbital extremes of the Pleistocene (Berger and Loutre, 1991). Each experiment is run through several complete orbital cycles with a dynamic ice domain spanning North America and Greenland, and fixed preindustrial greenhouse-gas concentrations. For all orbital configurations, model results produce greater ice-volume spectral power at the frequency of obliquity despite significantly greater summer insolation variability from the cycle of precession. We find obliquity enhances the climate sensitivity to direct insolation forcing through positive high-latitude surface feedbacks between vegetation, sea-ice, and mean-annual insolation while the seasonal dichotomy of precessional forcing leads to climate counterbalancing that dampens the annual ice-volume response. Longer cycle duration further amplifies the ice-volume response to obliquity. Our results help remedy the discrepancies between Milankovitch theory and the ice-volume proxy records. However, summer insolation intensity remains the most important factor for determining ice-volume rate-of-change in our experiments. Consequently, we still find a significant ice-volume response to precession, which is inconsistent with the Early Pleistocene records. The disconnect is likely attributable to climate phenomena not accounted for in the model or our choice of initial conditions, which are poorly constrained for the Early Pleistocene and ice-sheet modeling in general. Future work will examine the importance of initial climate conditions on ice-volume response.
Cell population modelling of yeast glycolytic oscillations.
Henson, Michael A; Müller, Dirk; Reuss, Matthias
2002-01-01
We investigated a cell-population modelling technique in which the population is constructed from an ensemble of individual cell models. The average value or the number distribution of any intracellular property captured by the individual cell model can be calculated by simulation of a sufficient number of individual cells. The proposed method is applied to a simple model of yeast glycolytic oscillations where synchronization of the cell population is mediated by the action of an excreted metabolite. We show that smooth one-dimensional distributions can be obtained with ensembles comprising 1000 individual cells. Random variations in the state and/or structure of individual cells are shown to produce complex dynamic behaviours which cannot be adequately captured by small ensembles. PMID:12206713
Gantner, Melisa E; Peroni, Roxana N; Morales, Juan F; Villalba, María L; Ruiz, María E; Talevi, Alan
2017-08-28
Breast Cancer Resistance Protein (BCRP) is an ATP-dependent efflux transporter linked to the multidrug resistance phenomenon in many diseases such as epilepsy and cancer and a potential source of drug interactions. For these reasons, the early identification of substrates and nonsubstrates of this transporter during the drug discovery stage is of great interest. We have developed a computational nonlinear model ensemble based on conformational independent molecular descriptors using a combined strategy of genetic algorithms, J48 decision tree classifiers, and data fusion. The best model ensemble consists in averaging the ranking of the 12 decision trees that showed the best performance on the training set, which also demonstrated a good performance for the test set. It was experimentally validated using the ex vivo everted rat intestinal sac model. Five anticonvulsant drugs classified as nonsubstrates for BRCP by the model ensemble were experimentally evaluated, and none of them proved to be a BCRP substrate under the experimental conditions used, thus confirming the predictive ability of the model ensemble. The model ensemble reported here is a potentially valuable tool to be used as an in silico ADME filter in computer-aided drug discovery campaigns intended to overcome BCRP-mediated multidrug resistance issues and to prevent drug-drug interactions.
From a structural average to the conformational ensemble of a DNA bulge
Shi, Xuesong; Beauchamp, Kyle A.; Harbury, Pehr B.; Herschlag, Daniel
2014-01-01
Direct experimental measurements of conformational ensembles are critical for understanding macromolecular function, but traditional biophysical methods do not directly report the solution ensemble of a macromolecule. Small-angle X-ray scattering interferometry has the potential to overcome this limitation by providing the instantaneous distance distribution between pairs of gold-nanocrystal probes conjugated to a macromolecule in solution. Our X-ray interferometry experiments reveal an increasing bend angle of DNA duplexes with bulges of one, three, and five adenosine residues, consistent with previous FRET measurements, and further reveal an increasingly broad conformational ensemble with increasing bulge length. The distance distributions for the AAA bulge duplex (3A-DNA) with six different Au-Au pairs provide strong evidence against a simple elastic model in which fluctuations occur about a single conformational state. Instead, the measured distance distributions suggest a 3A-DNA ensemble with multiple conformational states predominantly across a region of conformational space with bend angles between 24 and 85 degrees and characteristic bend directions and helical twists and displacements. Additional X-ray interferometry experiments revealed perturbations to the ensemble from changes in ionic conditions and the bulge sequence, effects that can be understood in terms of electrostatic and stacking contributions to the ensemble and that demonstrate the sensitivity of X-ray interferometry. Combining X-ray interferometry ensemble data with molecular dynamics simulations gave atomic-level models of representative conformational states and of the molecular interactions that may shape the ensemble, and fluorescence measurements with 2-aminopurine-substituted 3A-DNA provided initial tests of these atomistic models. More generally, X-ray interferometry will provide powerful benchmarks for testing and developing computational methods. PMID:24706812
NIMEFI: gene regulatory network inference using multiple ensemble feature importance algorithms.
Ruyssinck, Joeri; Huynh-Thu, Vân Anh; Geurts, Pierre; Dhaene, Tom; Demeester, Piet; Saeys, Yvan
2014-01-01
One of the long-standing open challenges in computational systems biology is the topology inference of gene regulatory networks from high-throughput omics data. Recently, two community-wide efforts, DREAM4 and DREAM5, have been established to benchmark network inference techniques using gene expression measurements. In these challenges the overall top performer was the GENIE3 algorithm. This method decomposes the network inference task into separate regression problems for each gene in the network in which the expression values of a particular target gene are predicted using all other genes as possible predictors. Next, using tree-based ensemble methods, an importance measure for each predictor gene is calculated with respect to the target gene and a high feature importance is considered as putative evidence of a regulatory link existing between both genes. The contribution of this work is twofold. First, we generalize the regression decomposition strategy of GENIE3 to other feature importance methods. We compare the performance of support vector regression, the elastic net, random forest regression, symbolic regression and their ensemble variants in this setting to the original GENIE3 algorithm. To create the ensemble variants, we propose a subsampling approach which allows us to cast any feature selection algorithm that produces a feature ranking into an ensemble feature importance algorithm. We demonstrate that the ensemble setting is key to the network inference task, as only ensemble variants achieve top performance. As second contribution, we explore the effect of using rankwise averaged predictions of multiple ensemble algorithms as opposed to only one. We name this approach NIMEFI (Network Inference using Multiple Ensemble Feature Importance algorithms) and show that this approach outperforms all individual methods in general, although on a specific network a single method can perform better. An implementation of NIMEFI has been made publicly available.
The Limits of Coding with Joint Constraints on Detected and Undetected Error Rates
NASA Technical Reports Server (NTRS)
Dolinar, Sam; Andrews, Kenneth; Pollara, Fabrizio; Divsalar, Dariush
2008-01-01
We develop a remarkably tight upper bound on the performance of a parameterized family of bounded angle maximum-likelihood (BA-ML) incomplete decoders. The new bound for this class of incomplete decoders is calculated from the code's weight enumerator, and is an extension of Poltyrev-type bounds developed for complete ML decoders. This bound can also be applied to bound the average performance of random code ensembles in terms of an ensemble average weight enumerator. We also formulate conditions defining a parameterized family of optimal incomplete decoders, defined to minimize both the total codeword error probability and the undetected error probability for any fixed capability of the decoder to detect errors. We illustrate the gap between optimal and BA-ML incomplete decoding via simulation of a small code.
A strictly Markovian expansion for plasma turbulence theory
NASA Technical Reports Server (NTRS)
Jones, F. C.
1978-01-01
The collision operator that appears in the equation of motion for a particle distribution function that has been averaged over an ensemble of random Hamiltonians is non-Markovian. It is non-Markovian in that it involves a propagated integral over the past history of the ensemble averaged distribution function. All formal expansions of this nonlinear collision operator to date preserve this non-Markovian character term by term yielding an integro-differential equation that must be converted to a diffusion equation by an additional approximation. In this note we derive an expansion of the collision operator that is strictly Markovian to any finite order and yields a diffusion equation as the lowest non-trivial order. The validity of this expansion is seen to be the same as that of the standard quasi-linear expansion.
Prevention of lower extremity stress fractures: a controlled trial of a shock absorbent insole.
Gardner, L I; Dziados, J E; Jones, B H; Brundage, J F; Harris, J M; Sullivan, R; Gill, P
1988-01-01
A prospective controlled trial was carried out to determine the usefulness of a viscoelastic polymer insole in prevention of stress fractures and stress reactions of the lower extremities. The subjects were 3,025 US Marine recruits who were followed for 12 weeks of training at Parris Island, South Carolina. Polymer and standard mesh insoles were systematically distributed in boots that were issued to members of odd and even numbered platoons. The most important finding was that an elastic polymer insole with good shock absorbency properties did not prevent stress reactions of bone during a 12-week period of vigorous physical training. To control for the confounding effects of running in running shoes, which occurred for about one and one-half hours per week for the first five weeks, we also examined the association of age of shoes and cost of shoes with injury incidence. A slight trend of increasing stress injuries by increasing age of shoes was observed. However, this trend did not account for the similarity of rates in the two insole groups. In addition, we observed a strong trend of decreasing stress injury rate by history of increasing physical activity, as well as a higher stress injury rate in White compared to Black recruits. The results of the trial were not altered after controlling for these factors. This prospective study confirms previous clinical reports of the association of stress fractures with physical activity history. The clinical application of a shock absorbing insole as a preventive for lower extremity stress reactions is not supported in these uniformly trained recruits. The findings are relevant to civilian populations. PMID:3056045
Quantifying stair gait stability in young and older adults, with modifications to insole hardness.
Antonio, Patrick J; Perry, Stephen D
2014-07-01
Stair gait falls are prevalent in older adults aged 65 years and older. Extrinsic variables such as changes to insole hardness are important factors that can compromise the balance control system and increase the incidence of falls, especially since age-related decline in the cutaneous sensation is common. Balance measurements such as the minimum center of mass/base of support (COM-BOS, termed 'stability margin') and COM-BOS medial/lateral range provide information about stability during stair gait. This study was conducted to investigate stair gait stability of young and older adults, with modifications to insole hardness. Twenty healthy adults (10 young adults, 10 older adults) were recruited (mean age = 23.1, SD 2.1; mean age = 73.2, SD 5.5) and instructed to descend a 4 step staircase, for a total of 40 trials. All participants wore similar canvas shoes of varying sizes, and corresponding insole hardnesses (barefoot, soft, medium, hard). Kinematic equipment utilized 12 infrared markers anteriorly placed on the individual to record COM motion and BOS location. The findings from the study demonstrated that older adults were less stable during stair descent. Consequently, insole conditions revealed that the barefoot condition may increase the likelihood of falls, as opposed to the other insole hardnesses (soft, medium and hard). These results suggest that older adults while barefoot are putting themselves at a great risk of falling during stair descent. Since age-related changes are inevitable and the preferred footwear of choice inside the home is bare feet, this is a crucial issue that should be addressed. Copyright © 2014 Elsevier B.V. All rights reserved.
Lewinson, Ryan T; Vallerand, Isabelle A; Collins, Kelsey H; Wiley, J Preston; Lun, Victor M Y; Patel, Chirag; Woodhouse, Linda J; Reimer, Raylene A; Worobets, Jay T; Herzog, Walter; Stefanyshyn, Darren J
2016-10-01
Wedged insoles are believed to be of clinical benefit to individuals with knee osteoarthritis by reducing the knee adduction moment (KAM) during gait. However, previous clinical trials have not specifically controlled for KAM reduction at baseline, thus it is unknown if reduced KAMs actually confer a clinical benefit. Forty-eight participants with medial knee osteoarthritis were randomly assigned to either a control group where no footwear intervention was given, or a wedged insole group where KAM reduction was confirmed at baseline. KAMs, Knee Injury and Osteoarthritis Outcome Score (KOOS) and Physical Activity Scale for the Elderly (PASE) scores were measured at baseline. KOOS and PASE surveys were re-administered at three months follow-up. The wedged insole group did not experience a statistically significant or clinically meaningful change in KOOS pain over three months (p=0.173). Furthermore, there was no association between change in KAM magnitude and change in KOOS pain over three months within the wedged insole group (R 2 =0.02, p=0.595). Improvement in KOOS pain for the wedged insole group was associated with worse baseline pain, and a change in PASE score over the three month study (R 2 =0.57, p=0.007). As an exploratory comparison, there was no significant difference in change in KOOS pain (p=0.49) between the insole and control group over three months. These results suggest that reduced KAMs do not appear to provide any clinical benefit compared to no intervention over a follow-up period of three months. ClinicalTrials.gov ID Number: NCT02067208. Copyright © 2016 Elsevier B.V. All rights reserved.
Increased insolation threshold for runaway greenhouse processes on Earth-like planets
NASA Astrophysics Data System (ADS)
Leconte, Jérémy; Forget, Francois; Charnay, Benjamin; Wordsworth, Robin; Pottier, Alizée
2013-12-01
The increase in solar luminosity over geological timescales should warm the Earth's climate, increasing water evaporation, which will in turn enhance the atmospheric greenhouse effect. Above a certain critical insolation, this destabilizing greenhouse feedback can `run away' until the oceans have completely evaporated. Through increases in stratospheric humidity, warming may also cause evaporative loss of the oceans to space before the runaway greenhouse state occurs. The critical insolation thresholds for these processes, however, remain uncertain because they have so far been evaluated using one-dimensional models that cannot account for the dynamical and cloud feedback effects that are key stabilizing features of the Earth's climate. Here we use a three-dimensional global climate model to show that the insolation threshold for the runaway greenhouse state to occur is about 375 W m-2, which is significantly higher than previously thought. Our model is specifically developed to quantify the climate response of Earth-like planets to increased insolation in hot and extremely moist atmospheres. In contrast with previous studies, we find that clouds have a destabilizing feedback effect on the long-term warming. However, subsident, unsaturated regions created by the Hadley circulation have a stabilizing effect that is strong enough to shift the runaway greenhouse limit to higher values of insolation than are inferred from one-dimensional models. Furthermore, because of wavelength-dependent radiative effects, the stratosphere remains sufficiently cold and dry to hamper the escape of atmospheric water, even at large fluxes. This has strong implications for the possibility of liquid water existing on Venus early in its history, and extends the size of the habitable zone around other stars.
Increased insolation threshold for runaway greenhouse processes on Earth-like planets.
Leconte, Jérémy; Forget, Francois; Charnay, Benjamin; Wordsworth, Robin; Pottier, Alizée
2013-12-12
The increase in solar luminosity over geological timescales should warm the Earth's climate, increasing water evaporation, which will in turn enhance the atmospheric greenhouse effect. Above a certain critical insolation, this destabilizing greenhouse feedback can 'run away' until the oceans have completely evaporated. Through increases in stratospheric humidity, warming may also cause evaporative loss of the oceans to space before the runaway greenhouse state occurs. The critical insolation thresholds for these processes, however, remain uncertain because they have so far been evaluated using one-dimensional models that cannot account for the dynamical and cloud feedback effects that are key stabilizing features of the Earth's climate. Here we use a three-dimensional global climate model to show that the insolation threshold for the runaway greenhouse state to occur is about 375 W m(-2), which is significantly higher than previously thought. Our model is specifically developed to quantify the climate response of Earth-like planets to increased insolation in hot and extremely moist atmospheres. In contrast with previous studies, we find that clouds have a destabilizing feedback effect on the long-term warming. However, subsident, unsaturated regions created by the Hadley circulation have a stabilizing effect that is strong enough to shift the runaway greenhouse limit to higher values of insolation than are inferred from one-dimensional models. Furthermore, because of wavelength-dependent radiative effects, the stratosphere remains sufficiently cold and dry to hamper the escape of atmospheric water, even at large fluxes. This has strong implications for the possibility of liquid water existing on Venus early in its history, and extends the size of the habitable zone around other stars.
Medium-Range Forecast Skill for Extraordinary Arctic Cyclones in Summer of 2008-2016
NASA Astrophysics Data System (ADS)
Yamagami, Akio; Matsueda, Mio; Tanaka, Hiroshi L.
2018-05-01
Arctic cyclones (ACs) are a severe atmospheric phenomenon that affects the Arctic environment. This study assesses the forecast skill of five leading operational medium-range ensemble forecasts for 10 extraordinary ACs that occurred in summer during 2008-2016. Average existence probability of the predicted ACs was >0.9 at lead times of ≤3.5 days. Average central position error of the predicted ACs was less than half of the mean radius of the 10 ACs (469.1 km) at lead times of 2.5-4.5 days. Average central pressure error of the predicted ACs was 5.5-10.7 hPa at such lead times. Therefore, the operational ensemble prediction systems generally predict the position of ACs within 469.1 km 2.5-4.5 days before they mature. The forecast skill for the extraordinary ACs is lower than that for midlatitude cyclones in the Northern Hemisphere but similar to that in the Southern Hemisphere.
Shear-stress fluctuations and relaxation in polymer glasses
NASA Astrophysics Data System (ADS)
Kriuchevskyi, I.; Wittmer, J. P.; Meyer, H.; Benzerara, O.; Baschnagel, J.
2018-01-01
We investigate by means of molecular dynamics simulation a coarse-grained polymer glass model focusing on (quasistatic and dynamical) shear-stress fluctuations as a function of temperature T and sampling time Δ t . The linear response is characterized using (ensemble-averaged) expectation values of the contributions (time averaged for each shear plane) to the stress-fluctuation relation μsf for the shear modulus and the shear-stress relaxation modulus G (t ) . Using 100 independent configurations, we pay attention to the respective standard deviations. While the ensemble-averaged modulus μsf(T ) decreases continuously with increasing T for all Δ t sampled, its standard deviation δ μsf(T ) is nonmonotonic with a striking peak at the glass transition. The question of whether the shear modulus is continuous or has a jump singularity at the glass transition is thus ill posed. Confirming the effective time-translational invariance of our systems, the Δ t dependence of μsf and related quantities can be understood using a weighted integral over G (t ) .
10 CFR 71.71 - Normal conditions of transport.
Code of Federal Regulations, 2014 CFR
2014-01-01
... NUCLEAR REGULATORY COMMISSION (CONTINUED) PACKAGING AND TRANSPORTATION OF RADIOACTIVE MATERIAL Package... each package design under normal conditions of transport must include a determination of the effect on... following table: Insolation Data Form and location of surface Total insolation for a 12-hour period(g cal...
10 CFR 71.71 - Normal conditions of transport.
Code of Federal Regulations, 2012 CFR
2012-01-01
... NUCLEAR REGULATORY COMMISSION (CONTINUED) PACKAGING AND TRANSPORTATION OF RADIOACTIVE MATERIAL Package... each package design under normal conditions of transport must include a determination of the effect on... following table: Insolation Data Form and location of surface Total insolation for a 12-hour period(g cal...
10 CFR 71.71 - Normal conditions of transport.
Code of Federal Regulations, 2011 CFR
2011-01-01
... NUCLEAR REGULATORY COMMISSION (CONTINUED) PACKAGING AND TRANSPORTATION OF RADIOACTIVE MATERIAL Package... each package design under normal conditions of transport must include a determination of the effect on... following table: Insolation Data Form and location of surface Total insolation for a 12-hour period(g cal...
10 CFR 71.71 - Normal conditions of transport.
Code of Federal Regulations, 2010 CFR
2010-01-01
... NUCLEAR REGULATORY COMMISSION (CONTINUED) PACKAGING AND TRANSPORTATION OF RADIOACTIVE MATERIAL Package... each package design under normal conditions of transport must include a determination of the effect on... following table: Insolation Data Form and location of surface Total insolation for a 12-hour period(g cal...
10 CFR 71.71 - Normal conditions of transport.
Code of Federal Regulations, 2013 CFR
2013-01-01
... NUCLEAR REGULATORY COMMISSION (CONTINUED) PACKAGING AND TRANSPORTATION OF RADIOACTIVE MATERIAL Package... each package design under normal conditions of transport must include a determination of the effect on... following table: Insolation Data Form and location of surface Total insolation for a 12-hour period(g cal...
Observational Evidence of Changes in Water Vapor, Clouds, and Radiation at the ARM SGP Site
NASA Technical Reports Server (NTRS)
Dong, Xiquan; Xi, Baike; Minnis, Patrick
2006-01-01
Characterizing water vapor and cloud effects on the surface radiation budget is critical for understanding the current climate because water vapor is the most important greenhouse gas in the atmosphere and clouds are one of the largest sources of uncertainty in predicting potential future climate change. Several studies have shown that insolation over land declined until 1990 then increased until the present. Using 8 years of data collected at the ARM Southern Great Plains (SGP) surface site, we found that the insolation increased from 1997 to 2000, but significantly decreased from 2001 to 2004, changes that exactly mirror the variation in the second-order fit of cloud fraction. Under clear-sky conditions, the rates of water vapor, insolation and downwelling longwave (LW) flux are -0.166 cm/yr, 0.48 Wm(exp -2)/yr, and -1.16 Wm(exp -2)/yr, respectively, indicating that water vapor changes are more important for LW flux than for insolation.
A preliminary objective evaluation of leprosy footwear using in-shoe pressure measurement.
Linge, K
1996-01-01
The primary function of leprosy shoes, insoles and podiatric orthoses is to provide an underfoot environment capable of distributing the inevitable vertical forces, so reducing areas of peak pressure and ideally the period through which they are applied. Many patients with Hansen's disease have both skeletal deformity and anesthetised feet and the presence of high plantar pressures is the key reason for foot ulceration. This objective investigation using in-shoe dynamic pressure measurements showed that the addition of a shank to control insole rigidity reduced the overall peak pressures under the foot. When a deep canvas shoe was used to test single- and double-thickness insoles of two different types of material it was found in each case that the double-thickness mode was advantageous overall. Microcellular rubber insoles in two types of leprosy shoe were replaced by the polymer Poron. The Poron proved to be superior to both microcellular rubbers. The peak pressure and pressure-time integral should be considered as complimentary variables when determining the efficacy of footwear.
Effect of magnetic therapy on selected physical performances.
Schall, David M; Ishee, Jimmy H; Titlow, Larry W
2003-05-01
The purpose of this study was to investigate the effects of magnetic therapy in the form of shoe insoles on vertical jump, bench squat, 40-yd dash, and a soccer-specific fitness test performance. Subjects were 14 collegiate male soccer players who were pretested, retested 3 weeks later, and then placed into a double-blind control or treatment group using a matching procedure. The control group received magnetic shoe insoles with a rating of 125 gauss, and the treatment group received insoles with a rating of 600 gauss. Subjects wore the insoles during practice and games for 7 weeks and were then retested. Results indicated significant differences among test scores during the 3 time periods but not between the treatment and control groups. There was a decline in 40-yd dash performance from the initial evaluation (5.10 seconds) to the final evaluation (5.08 seconds). There were no other significant differences. Within the limitations of the study, magnetic therapy did not improve physical performance.
View-limiting shrouds for insolation radiometers
NASA Technical Reports Server (NTRS)
Dennison, E. W.; Trentelman, G. F.
1985-01-01
Insolation radiometers (normal incidence pyrheliometers) are used to measure the solar radiation incident on solar concentrators for calibrating thermal power generation measurements. The measured insolation value is dependent on the atmospheric transparency, solar elevation angle, circumsolar radiation, and radiometer field of view. The radiant energy entering the thermal receiver is dependent on the same factors. The insolation value and the receiver input will be proportional if the concentrator and the radiometer have similar fields of view. This report describes one practical method for matching the field of view of a radiometer to that of a solar concentrator. The concentrator field of view can be calculated by optical ray tracing methods and the field of view of a radiometer with a simple shroud can be calculated by using geometric equations. The parameters for the shroud can be adjusted to provide an acceptable match between the respective fields of view. Concentrator fields of view have been calculated for a family of paraboloidal concentrators and receiver apertures. The corresponding shroud parameters have also been determined.
Global and Arctic climate engineering: numerical model studies.
Caldeira, Ken; Wood, Lowell
2008-11-13
We perform numerical simulations of the atmosphere, sea ice and upper ocean to examine possible effects of diminishing incoming solar radiation, insolation, on the climate system. We simulate both global and Arctic climate engineering in idealized scenarios in which insolation is diminished above the top of the atmosphere. We consider the Arctic scenarios because climate change is manifesting most strongly there. Our results indicate that, while such simple insolation modulation is unlikely to perfectly reverse the effects of greenhouse gas warming, over a broad range of measures considering both temperature and water, an engineered high CO2 climate can be made much more similar to the low CO2 climate than would be a high CO2 climate in the absence of such engineering. At high latitudes, there is less sunlight deflected per unit albedo change but climate system feedbacks operate more powerfully there. These two effects largely cancel each other, making the global mean temperature response per unit top-of-atmosphere albedo change relatively insensitive to latitude. Implementing insolation modulation appears to be feasible.
Solar Insolation Effect on the Local Distribution of Lunar Hydroxyl
NASA Astrophysics Data System (ADS)
Kim, Suyeon; Yi, Yu; Hong, Ik-Seon; Sohn, Jongdae
2018-03-01
Moon mineralogy mapper (M3)'s work proved that the moon is not completely dry but has some hydroxyl/water. M3's data confirmed that the amount of hydroxyl on the lunar surface is inversely related to the measured signal brightness, suggesting the lunar surface is sensitive to temperature by solar insolation. We tested the effect of solar insolation on the local distribution of hydroxyl by using M3 data, and we found that most craters had more hydroxyl in shade areas than in sunlit areas. This means that the local distribution of hydroxyl is absolutely influenced by the amount of sunshine. We investigated the factors affecting differences in hydroxyl; we found that the higher the latitude, the larger the difference during daytime. We also measured the pyroxene content and found that pyroxene affects the amount of hydroxyl, but it does not affect the difference in hydroxyl between sunlit and shaded areas. Therefore, we confirmed that solar insolation plays a significant role in the local distribution of hydroxyl, regardless of surface composition.
NASA Astrophysics Data System (ADS)
Dib, Alain; Kavvas, M. Levent
2018-03-01
The characteristic form of the Saint-Venant equations is solved in a stochastic setting by using a newly proposed Fokker-Planck Equation (FPE) methodology. This methodology computes the ensemble behavior and variability of the unsteady flow in open channels by directly solving for the flow variables' time-space evolutionary probability distribution. The new methodology is tested on a stochastic unsteady open-channel flow problem, with an uncertainty arising from the channel's roughness coefficient. The computed statistical descriptions of the flow variables are compared to the results obtained through Monte Carlo (MC) simulations in order to evaluate the performance of the FPE methodology. The comparisons show that the proposed methodology can adequately predict the results of the considered stochastic flow problem, including the ensemble averages, variances, and probability density functions in time and space. Unlike the large number of simulations performed by the MC approach, only one simulation is required by the FPE methodology. Moreover, the total computational time of the FPE methodology is smaller than that of the MC approach, which could prove to be a particularly crucial advantage in systems with a large number of uncertain parameters. As such, the results obtained in this study indicate that the proposed FPE methodology is a powerful and time-efficient approach for predicting the ensemble average and variance behavior, in both space and time, for an open-channel flow process under an uncertain roughness coefficient.
Interactive vs. Non-Interactive Ensembles for Weather Prediction and Climate Projection
NASA Astrophysics Data System (ADS)
Duane, Gregory
2013-04-01
If the members of an ensemble of different models are allowed to interact with one another in run time, predictive skill can be improved as compared to that of any individual model or any average of indvidual model outputs. Inter-model connections in such an interactive ensemble can be trained, using historical data, so that the resulting ``supermodel" synchronizes with reality when used in weather-prediction mode, where the individual models perform data assimilation from each other (with trainable inter-model "observation error") as well as from real observations. In climate-projection mode, parameters of the individual models are changed, as might occur from an increase in GHG levels, and one obtains relevant statistical properties of the new supermodel attractor. In simple cases, it has been shown that training of the inter-model connections with the old parameter values gives a supermodel that is still predictive when the parameter values are changed. Here we inquire as to the circumstances under which supermodel performance can be expected to exceed that of the customary weighted average of model outputs. We consider a supermodel formed from quasigeostrophic channel models with different forcing coefficients, and introduce an effective training scheme for the inter-model connections. We show that the blocked-zonal index cycle is reproduced better by the supermodel than by any non-interactive ensemble in the extreme case where the forcing coefficients of the different models are very large or very small. With realistic differences in forcing coefficients, as would be representative of actual differences among IPCC-class models, the usual linearity assumption is justified and a weighted average of model outputs is adequate. It is therefore hypothesized that supermodeling is likely to be useful in situations where there are qualitative model differences, as arising from sub-gridscale parameterizations, that affect overall model behavior. Otherwise the usual ex post facto averaging will probably suffice. Previous results from an ENSO-prediction supermodel [Kirtman et al.] are re-examined in light of the hypothesis about the importance of qualitative inter-model differences.
Yongye, Austin B.; Bender, Andreas
2010-01-01
Representing the 3D structures of ligands in virtual screenings via multi-conformer ensembles can be computationally intensive, especially for compounds with a large number of rotatable bonds. Thus, reducing the size of multi-conformer databases and the number of query conformers, while simultaneously reproducing the bioactive conformer with good accuracy, is of crucial interest. While clustering and RMSD filtering methods are employed in existing conformer generators, the novelty of this work is the inclusion of a clustering scheme (NMRCLUST) that does not require a user-defined cut-off value. This algorithm simultaneously optimizes the number and the average spread of the clusters. Here we describe and test four inter-dependent approaches for selecting computer-generated conformers, namely: OMEGA, NMRCLUST, RMS filtering and averaged-RMS filtering. The bioactive conformations of 65 selected ligands were extracted from the corresponding protein:ligand complexes from the Protein Data Bank, including eight ligands that adopted dissimilar bound conformations within different receptors. We show that NMRCLUST can be employed to further filter OMEGA-generated conformers while maintaining biological relevance of the ensemble. It was observed that NMRCLUST (containing on average 10 times fewer conformers per compound) performed nearly as well as OMEGA, and both outperformed RMS filtering and averaged-RMS filtering in terms of identifying the bioactive conformations with excellent and good matches (0.5 < RMSD < 1.0 Å). Furthermore, we propose thresholds for OMEGA root-mean square filtering depending on the number of rotors in a compound: 0.8, 1.0 and 1.4 for structures with low (1–4), medium (5–9) and high (10–15) numbers of rotatable bonds, respectively. The protocol employed is general and can be applied to reduce the number of conformers in multi-conformer compound collections and alleviate the complexity of downstream data processing in virtual screening experiments. Electronic supplementary material The online version of this article (doi:10.1007/s10822-010-9365-1) contains supplementary material, which is available to authorized users. PMID:20499135
2012-01-01
Background Biomarker panels derived separately from genomic and proteomic data and with a variety of computational methods have demonstrated promising classification performance in various diseases. An open question is how to create effective proteo-genomic panels. The framework of ensemble classifiers has been applied successfully in various analytical domains to combine classifiers so that the performance of the ensemble exceeds the performance of individual classifiers. Using blood-based diagnosis of acute renal allograft rejection as a case study, we address the following question in this paper: Can acute rejection classification performance be improved by combining individual genomic and proteomic classifiers in an ensemble? Results The first part of the paper presents a computational biomarker development pipeline for genomic and proteomic data. The pipeline begins with data acquisition (e.g., from bio-samples to microarray data), quality control, statistical analysis and mining of the data, and finally various forms of validation. The pipeline ensures that the various classifiers to be combined later in an ensemble are diverse and adequate for clinical use. Five mRNA genomic and five proteomic classifiers were developed independently using single time-point blood samples from 11 acute-rejection and 22 non-rejection renal transplant patients. The second part of the paper examines five ensembles ranging in size from two to 10 individual classifiers. Performance of ensembles is characterized by area under the curve (AUC), sensitivity, and specificity, as derived from the probability of acute rejection for individual classifiers in the ensemble in combination with one of two aggregation methods: (1) Average Probability or (2) Vote Threshold. One ensemble demonstrated superior performance and was able to improve sensitivity and AUC beyond the best values observed for any of the individual classifiers in the ensemble, while staying within the range of observed specificity. The Vote Threshold aggregation method achieved improved sensitivity for all 5 ensembles, but typically at the cost of decreased specificity. Conclusion Proteo-genomic biomarker ensemble classifiers show promise in the diagnosis of acute renal allograft rejection and can improve classification performance beyond that of individual genomic or proteomic classifiers alone. Validation of our results in an international multicenter study is currently underway. PMID:23216969
Günther, Oliver P; Chen, Virginia; Freue, Gabriela Cohen; Balshaw, Robert F; Tebbutt, Scott J; Hollander, Zsuzsanna; Takhar, Mandeep; McMaster, W Robert; McManus, Bruce M; Keown, Paul A; Ng, Raymond T
2012-12-08
Biomarker panels derived separately from genomic and proteomic data and with a variety of computational methods have demonstrated promising classification performance in various diseases. An open question is how to create effective proteo-genomic panels. The framework of ensemble classifiers has been applied successfully in various analytical domains to combine classifiers so that the performance of the ensemble exceeds the performance of individual classifiers. Using blood-based diagnosis of acute renal allograft rejection as a case study, we address the following question in this paper: Can acute rejection classification performance be improved by combining individual genomic and proteomic classifiers in an ensemble? The first part of the paper presents a computational biomarker development pipeline for genomic and proteomic data. The pipeline begins with data acquisition (e.g., from bio-samples to microarray data), quality control, statistical analysis and mining of the data, and finally various forms of validation. The pipeline ensures that the various classifiers to be combined later in an ensemble are diverse and adequate for clinical use. Five mRNA genomic and five proteomic classifiers were developed independently using single time-point blood samples from 11 acute-rejection and 22 non-rejection renal transplant patients. The second part of the paper examines five ensembles ranging in size from two to 10 individual classifiers. Performance of ensembles is characterized by area under the curve (AUC), sensitivity, and specificity, as derived from the probability of acute rejection for individual classifiers in the ensemble in combination with one of two aggregation methods: (1) Average Probability or (2) Vote Threshold. One ensemble demonstrated superior performance and was able to improve sensitivity and AUC beyond the best values observed for any of the individual classifiers in the ensemble, while staying within the range of observed specificity. The Vote Threshold aggregation method achieved improved sensitivity for all 5 ensembles, but typically at the cost of decreased specificity. Proteo-genomic biomarker ensemble classifiers show promise in the diagnosis of acute renal allograft rejection and can improve classification performance beyond that of individual genomic or proteomic classifiers alone. Validation of our results in an international multicenter study is currently underway.
Multi-model analysis in hydrological prediction
NASA Astrophysics Data System (ADS)
Lanthier, M.; Arsenault, R.; Brissette, F.
2017-12-01
Hydrologic modelling, by nature, is a simplification of the real-world hydrologic system. Therefore ensemble hydrological predictions thus obtained do not present the full range of possible streamflow outcomes, thereby producing ensembles which demonstrate errors in variance such as under-dispersion. Past studies show that lumped models used in prediction mode can return satisfactory results, especially when there is not enough information available on the watershed to run a distributed model. But all lumped models greatly simplify the complex processes of the hydrologic cycle. To generate more spread in the hydrologic ensemble predictions, multi-model ensembles have been considered. In this study, the aim is to propose and analyse a method that gives an ensemble streamflow prediction that properly represents the forecast probabilities and reduced ensemble bias. To achieve this, three simple lumped models are used to generate an ensemble. These will also be combined using multi-model averaging techniques, which generally generate a more accurate hydrogram than the best of the individual models in simulation mode. This new predictive combined hydrogram is added to the ensemble, thus creating a large ensemble which may improve the variability while also improving the ensemble mean bias. The quality of the predictions is then assessed on different periods: 2 weeks, 1 month, 3 months and 6 months using a PIT Histogram of the percentiles of the real observation volumes with respect to the volumes of the ensemble members. Initially, the models were run using historical weather data to generate synthetic flows. This worked for individual models, but not for the multi-model and for the large ensemble. Consequently, by performing data assimilation at each prediction period and thus adjusting the initial states of the models, the PIT Histogram could be constructed using the observed flows while allowing the use of the multi-model predictions. The under-dispersion has been largely corrected on short-term predictions. For the longer term, the addition of the multi-model member has been beneficial to the quality of the predictions, although it is too early to determine whether the gain is related to the addition of a member or if multi-model member has plus-value itself.
Total probabilities of ensemble runoff forecasts
NASA Astrophysics Data System (ADS)
Olav Skøien, Jon; Bogner, Konrad; Salamon, Peter; Smith, Paul; Pappenberger, Florian
2017-04-01
Ensemble forecasting has a long history from meteorological modelling, as an indication of the uncertainty of the forecasts. However, it is necessary to calibrate and post-process the ensembles as the they often exhibit both bias and dispersion errors. Two of the most common methods for this are Bayesian Model Averaging (Raftery et al., 2005) and Ensemble Model Output Statistics (EMOS) (Gneiting et al., 2005). There are also methods for regionalizing these methods (Berrocal et al., 2007) and for incorporating the correlation between lead times (Hemri et al., 2013). Engeland and Steinsland Engeland and Steinsland (2014) developed a framework which can estimate post-processing parameters varying in space and time, while giving a spatially and temporally consistent output. However, their method is computationally complex for our larger number of stations, which makes it unsuitable for our purpose. Our post-processing method of the ensembles is developed in the framework of the European Flood Awareness System (EFAS - http://www.efas.eu), where we are making forecasts for whole Europe, and based on observations from around 700 catchments. As the target is flood forecasting, we are also more interested in improving the forecast skill for high-flows rather than in a good prediction of the entire flow regime. EFAS uses a combination of ensemble forecasts and deterministic forecasts from different meteorological forecasters to force a distributed hydrologic model and to compute runoff ensembles for each river pixel within the model domain. Instead of showing the mean and the variability of each forecast ensemble individually, we will now post-process all model outputs to estimate the total probability, the post-processed mean and uncertainty of all ensembles. The post-processing parameters are first calibrated for each calibration location, but we are adding a spatial penalty in the calibration process to force a spatial correlation of the parameters. The penalty takes distance, stream-connectivity and size of the catchment areas into account. This can in some cases have a slight negative impact on the calibration error, but avoids large differences between parameters of nearby locations, whether stream connected or not. The spatial calibration also makes it easier to interpolate the post-processing parameters to uncalibrated locations. We also look into different methods for handling the non-normal distributions of runoff data and the effect of different data transformations on forecasts skills in general and for floods in particular. Berrocal, V. J., Raftery, A. E. and Gneiting, T.: Combining Spatial Statistical and Ensemble Information in Probabilistic Weather Forecasts, Mon. Weather Rev., 135(4), 1386-1402, doi:10.1175/MWR3341.1, 2007. Engeland, K. and Steinsland, I.: Probabilistic postprocessing models for flow forecasts for a system of catchments and several lead times, Water Resour. Res., 50(1), 182-197, doi:10.1002/2012WR012757, 2014. Gneiting, T., Raftery, A. E., Westveld, A. H. and Goldman, T.: Calibrated Probabilistic Forecasting Using Ensemble Model Output Statistics and Minimum CRPS Estimation, Mon. Weather Rev., 133(5), 1098-1118, doi:10.1175/MWR2904.1, 2005. Hemri, S., Fundel, F. and Zappa, M.: Simultaneous calibration of ensemble river flow predictions over an entire range of lead times, Water Resour. Res., 49(10), 6744-6755, doi:10.1002/wrcr.20542, 2013. Raftery, A. E., Gneiting, T., Balabdaoui, F. and Polakowski, M.: Using Bayesian Model Averaging to Calibrate Forecast Ensembles, Mon. Weather Rev., 133(5), 1155-1174, doi:10.1175/MWR2906.1, 2005.
NASA Astrophysics Data System (ADS)
Yin, Dong-shan; Gao, Yu-ping; Zhao, Shu-hong
2017-07-01
Millisecond pulsars can generate another type of time scale that is totally independent of the atomic time scale, because the physical mechanisms of the pulsar time scale and the atomic time scale are quite different from each other. Usually the pulsar timing observations are not evenly sampled, and the internals between two data points range from several hours to more than half a month. Further more, these data sets are sparse. All this makes it difficult to generate an ensemble pulsar time scale. Hence, a new algorithm to calculate the ensemble pulsar time scale is proposed. Firstly, a cubic spline interpolation is used to densify the data set, and make the intervals between data points uniform. Then, the Vondrak filter is employed to smooth the data set, and get rid of the high-frequency noises, and finally the weighted average method is adopted to generate the ensemble pulsar time scale. The newly released NANOGRAV (North American Nanohertz Observatory for Gravitational Waves) 9-year data set is used to generate the ensemble pulsar time scale. This data set includes the 9-year observational data of 37 millisecond pulsars observed by the 100-meter Green Bank telescope and the 305-meter Arecibo telescope. It is found that the algorithm used in this paper can reduce effectively the influence caused by the noises in pulsar timing residuals, and improve the long-term stability of the ensemble pulsar time scale. Results indicate that the long-term (> 1 yr) stability of the ensemble pulsar time scale is better than 3.4 × 10-15.
Toussaint, Renaud; Pride, Steven R
2002-09-01
This is the first of a series of three articles that treats fracture localization as a critical phenomenon. This first article establishes a statistical mechanics based on ensemble averages when fluctuations through time play no role in defining the ensemble. Ensembles are obtained by dividing a huge rock sample into many mesoscopic volumes. Because rocks are a disordered collection of grains in cohesive contact, we expect that once shear strain is applied and cracks begin to arrive in the system, the mesoscopic volumes will have a wide distribution of different crack states. These mesoscopic volumes are the members of our ensembles. We determine the probability of observing a mesoscopic volume to be in a given crack state by maximizing Shannon's measure of the emergent-crack disorder subject to constraints coming from the energy balance of brittle fracture. The laws of thermodynamics, the partition function, and the quantification of temperature are obtained for such cracking systems.
Seasonal/Latitudinal Models of Stratospheric Photochemistry on Saturn
NASA Astrophysics Data System (ADS)
Moses, J. I.; Greathouse, T. K.
2004-11-01
To date, most investigations of stratospheric photochemistry on the outer planets have involved one-dimensional (1-D) ``global-average'' or single-latitude models for a single season. With Cassini CIRS poised to map hydrocarbon distributions across Saturn, and with advances in detector technology and telescope size for Earth-based observations allowing composition and temperatures to be derived as a function of latitude, we are now in a position to evaluate the effectiveness of 1-D models in describing the stratospheric composition. Are 2-D models that include meridional transport necessary to reproduce the observed hydrocarbon latitudinal distributions, or can 1-D seasonal models provide an accurate description? In order to evaluate these questions, we have developed a realistic, time-variable, 1-D seasonal model for stratospheric photochemistry on Saturn. The model accounts for variations in orbital position and in ultraviolet flux due to solar-cycle variations and ring-shadow effects. The results for one Saturnian year, starting at Ls = 0o in 1980 and running until the next vernal equinox in 2009, are presented for numerous latitudes. Due to the long vertical diffusion time scale at pressures greater than ˜1 mbar, we find that seasonal effects are more pronounced at high altitudes. In addition, a phase lag between insolation and chemical response increases with increasing pressure. In the summer hemisphere, hydrocarbon abundances do not exhibit much variation with latitude because the increase in the length of the day with increasing latitude counterbalances the increasing solar zenith angle, causing the daily-averaged insolation to remain nearly constant over a wide range of latitudes. Latitudinal variations are more pronounced during other seasons. We compare our model results with various observations.
Muñoz-Organero, Mario; Davies, Richard; Mawson, Sue
2017-01-01
Insole pressure sensors capture the force distribution patterns during the stance phase while walking. By comparing patterns obtained from healthy individuals to patients suffering different medical conditions based on a given similarity measure, automatic impairment indexes can be computed in order to help in applications such as rehabilitation. This paper uses the data sensed from insole pressure sensors for a group of healthy controls to train an auto-encoder using patterns of stochastic distances in series of consecutive steps while walking at normal speeds. Two experiment groups are compared to the healthy control group: a group of patients suffering knee pain and a group of post-stroke survivors. The Mahalanobis distance is computed for every single step by each participant compared to the entire dataset sensed from healthy controls. The computed distances for consecutive steps are fed into the previously trained autoencoder and the average error is used to assess how close the walking segment is to the autogenerated model from healthy controls. The results show that automatic distortion indexes can be used to assess each participant as compared to normal patterns computed from healthy controls. The stochastic distances observed for the group of stroke survivors are bigger than those for the people with knee pain.
Lahiri, A; Roy, Abhijit Guha; Sheet, Debdoot; Biswas, Prabir Kumar
2016-08-01
Automated segmentation of retinal blood vessels in label-free fundus images entails a pivotal role in computed aided diagnosis of ophthalmic pathologies, viz., diabetic retinopathy, hypertensive disorders and cardiovascular diseases. The challenge remains active in medical image analysis research due to varied distribution of blood vessels, which manifest variations in their dimensions of physical appearance against a noisy background. In this paper we formulate the segmentation challenge as a classification task. Specifically, we employ unsupervised hierarchical feature learning using ensemble of two level of sparsely trained denoised stacked autoencoder. First level training with bootstrap samples ensures decoupling and second level ensemble formed by different network architectures ensures architectural revision. We show that ensemble training of auto-encoders fosters diversity in learning dictionary of visual kernels for vessel segmentation. SoftMax classifier is used for fine tuning each member autoencoder and multiple strategies are explored for 2-level fusion of ensemble members. On DRIVE dataset, we achieve maximum average accuracy of 95.33% with an impressively low standard deviation of 0.003 and Kappa agreement coefficient of 0.708. Comparison with other major algorithms substantiates the high efficacy of our model.
Sensory processing patterns predict the integration of information held in visual working memory.
Lowe, Matthew X; Stevenson, Ryan A; Wilson, Kristin E; Ouslis, Natasha E; Barense, Morgan D; Cant, Jonathan S; Ferber, Susanne
2016-02-01
Given the limited resources of visual working memory, multiple items may be remembered as an averaged group or ensemble. As a result, local information may be ill-defined, but these ensemble representations provide accurate diagnostics of the natural world by combining gist information with item-level information held in visual working memory. Some neurodevelopmental disorders are characterized by sensory processing profiles that predispose individuals to avoid or seek-out sensory stimulation, fundamentally altering their perceptual experience. Here, we report such processing styles will affect the computation of ensemble statistics in the general population. We identified stable adult sensory processing patterns to demonstrate that individuals with low sensory thresholds who show a greater proclivity to engage in active response strategies to prevent sensory overstimulation are less likely to integrate mean size information across a set of similar items and are therefore more likely to be biased away from the mean size representation of an ensemble display. We therefore propose the study of ensemble processing should extend beyond the statistics of the display, and should also consider the statistics of the observer. (PsycINFO Database Record (c) 2016 APA, all rights reserved).
Generalized ensemble theory with non-extensive statistics
NASA Astrophysics Data System (ADS)
Shen, Ke-Ming; Zhang, Ben-Wei; Wang, En-Ke
2017-12-01
The non-extensive canonical ensemble theory is reconsidered with the method of Lagrange multipliers by maximizing Tsallis entropy, with the constraint that the normalized term of Tsallis' q -average of physical quantities, the sum ∑ pjq, is independent of the probability pi for Tsallis parameter q. The self-referential problem in the deduced probability and thermal quantities in non-extensive statistics is thus avoided, and thermodynamical relationships are obtained in a consistent and natural way. We also extend the study to the non-extensive grand canonical ensemble theory and obtain the q-deformed Bose-Einstein distribution as well as the q-deformed Fermi-Dirac distribution. The theory is further applied to the generalized Planck law to demonstrate the distinct behaviors of the various generalized q-distribution functions discussed in literature.
NASA Astrophysics Data System (ADS)
Poulos, M. J.; Pierce, J. L.; McNamara, J. P.; Flores, A. N.; Benner, S. G.
2015-12-01
Terrain aspect alters the spatial distribution of insolation across topography, driving eco-pedo-hydro-geomorphic feedbacks that can alter landform evolution and result in valley asymmetries for a suite of land surface characteristics (e.g. slope length and steepness, vegetation, soil properties, and drainage development). Asymmetric valleys serve as natural laboratories for studying how landscapes respond to climate perturbation. In the semi-arid montane granodioritic terrain of the Idaho batholith, Northern Rocky Mountains, USA, prior works indicate that reduced insolation on northern (pole-facing) aspects prolongs snow pack persistence, and is associated with thicker, finer-grained soils, that retain more water, prolong the growing season, support coniferous forest rather than sagebrush steppe ecosystems, stabilize slopes at steeper angles, and produce sparser drainage networks. We hypothesize that the primary drivers of valley asymmetry development are changes in the pedon-scale water-balance that coalesce to alter catchment-scale runoff and drainage development, and ultimately cause the divide between north and south-facing land surfaces to migrate northward. We explore this conceptual framework by coupling land surface analyses with statistical modeling to assess relationships and the relative importance of land surface characteristics. Throughout the Idaho batholith, we systematically mapped and tabulated various statistical measures of landforms, land cover, and hydroclimate within discrete valley segments (n=~10,000). We developed a random forest based statistical model to predict valley slope asymmetry based upon numerous measures (n>300) of landscape asymmetries. Preliminary results suggest that drainages are tightly coupled with hillslopes throughout the region, with drainage-network slope being one of the strongest predictors of land-surface-averaged slope asymmetry. When slope-related statistics are excluded, due to possible autocorrelation, valley slope asymmetry is most strongly predicted by asymmetries of insolation and drainage density, which generally supports a water-balance based conceptual model of valley asymmetry development. Surprisingly, vegetation asymmetries had relatively low predictive importance.
Impacts of stratospheric sulfate geoengineering on tropospheric ozone
NASA Astrophysics Data System (ADS)
Xia, Lili; Nowack, Peer J.; Tilmes, Simone; Robock, Alan
2017-10-01
A range of solar radiation management (SRM) techniques has been proposed to counter anthropogenic climate change. Here, we examine the potential effects of stratospheric sulfate aerosols and solar insolation reduction on tropospheric ozone and ozone at Earth's surface. Ozone is a key air pollutant, which can produce respiratory diseases and crop damage. Using a version of the Community Earth System Model from the National Center for Atmospheric Research that includes comprehensive tropospheric and stratospheric chemistry, we model both stratospheric sulfur injection and solar irradiance reduction schemes, with the aim of achieving equal levels of surface cooling relative to the Representative Concentration Pathway 6.0 scenario. This allows us to compare the impacts of sulfate aerosols and solar dimming on atmospheric ozone concentrations. Despite nearly identical global mean surface temperatures for the two SRM approaches, solar insolation reduction increases global average surface ozone concentrations, while sulfate injection decreases it. A fundamental difference between the two geoengineering schemes is the importance of heterogeneous reactions in the photochemical ozone balance with larger stratospheric sulfate abundance, resulting in increased ozone depletion in mid- and high latitudes. This reduces the net transport of stratospheric ozone into the troposphere and thus is a key driver of the overall decrease in surface ozone. At the same time, the change in stratospheric ozone alters the tropospheric photochemical environment due to enhanced ultraviolet radiation. A shared factor among both SRM scenarios is decreased chemical ozone loss due to reduced tropospheric humidity. Under insolation reduction, this is the dominant factor giving rise to the global surface ozone increase. Regionally, both surface ozone increases and decreases are found for both scenarios; that is, SRM would affect regions of the world differently in terms of air pollution. In conclusion, surface ozone and tropospheric chemistry would likely be affected by SRM, but the overall effect is strongly dependent on the SRM scheme. Due to the health and economic impacts of surface ozone, all these impacts should be taken into account in evaluations of possible consequences of SRM.
On the error probability of general tree and trellis codes with applications to sequential decoding
NASA Technical Reports Server (NTRS)
Johannesson, R.
1973-01-01
An upper bound on the average error probability for maximum-likelihood decoding of the ensemble of random binary tree codes is derived and shown to be independent of the length of the tree. An upper bound on the average error probability for maximum-likelihood decoding of the ensemble of random L-branch binary trellis codes of rate R = 1/n is derived which separates the effects of the tail length T and the memory length M of the code. It is shown that the bound is independent of the length L of the information sequence. This implication is investigated by computer simulations of sequential decoding utilizing the stack algorithm. These simulations confirm the implication and further suggest an empirical formula for the true undetected decoding error probability with sequential decoding.
Program for narrow-band analysis of aircraft flyover noise using ensemble averaging techniques
NASA Technical Reports Server (NTRS)
Gridley, D.
1982-01-01
A package of computer programs was developed for analyzing acoustic data from an aircraft flyover. The package assumes the aircraft is flying at constant altitude and constant velocity in a fixed attitude over a linear array of ground microphones. Aircraft position is provided by radar and an option exists for including the effects of the aircraft's rigid-body attitude relative to the flight path. Time synchronization between radar and acoustic recording stations permits ensemble averaging techniques to be applied to the acoustic data thereby increasing the statistical accuracy of the acoustic results. Measured layered meteorological data obtained during the flyovers are used to compute propagation effects through the atmosphere. Final results are narrow-band spectra and directivities corrected for the flight environment to an equivalent static condition at a specified radius.
Optical Rabi Oscillations in a Quantum Dot Ensemble
NASA Astrophysics Data System (ADS)
Kujiraoka, Mamiko; Ishi-Hayase, Junko; Akahane, Kouichi; Yamamoto, Naokatsu; Ema, Kazuhiro; Sasaki, Masahide
2010-09-01
We have investigated Rabi oscillations of exciton polarization in a self-assembled InAs quantum dot ensemble. The four-wave mixing signals measured as a function of the average of the pulse area showed the large in-plane anisotropy and nonharmonic oscillations. The experimental results can be well reproduced by a two-level model calculation including three types of inhomogeneities without any fitting parameter. The large anisotropy can be well explained by the anisotropic dipole moments. We also find that the nonharmonic behaviors partly originate from the polarization interference.
A random matrix approach to credit risk.
Münnix, Michael C; Schäfer, Rudi; Guhr, Thomas
2014-01-01
We estimate generic statistical properties of a structural credit risk model by considering an ensemble of correlation matrices. This ensemble is set up by Random Matrix Theory. We demonstrate analytically that the presence of correlations severely limits the effect of diversification in a credit portfolio if the correlations are not identically zero. The existence of correlations alters the tails of the loss distribution considerably, even if their average is zero. Under the assumption of randomly fluctuating correlations, a lower bound for the estimation of the loss distribution is provided.
A Random Matrix Approach to Credit Risk
Guhr, Thomas
2014-01-01
We estimate generic statistical properties of a structural credit risk model by considering an ensemble of correlation matrices. This ensemble is set up by Random Matrix Theory. We demonstrate analytically that the presence of correlations severely limits the effect of diversification in a credit portfolio if the correlations are not identically zero. The existence of correlations alters the tails of the loss distribution considerably, even if their average is zero. Under the assumption of randomly fluctuating correlations, a lower bound for the estimation of the loss distribution is provided. PMID:24853864
ensembleBMA: An R Package for Probabilistic Forecasting using Ensembles and Bayesian Model Averaging
2007-08-15
library is used to allow addition of the legend and map outline to the plot. > bluescale <- function(n) hsv (4/6, s = seq(from = 1 /8, to = 1 , length = n...v = 1 ) > plotBMAforecast( probFreeze290104, lon=srftGridData$lon, lat =srftGridData$ lat , type="image", col=bluescale(100)) > title("Probability of...probPrecip130103) # used to determine zlim in plots [ 1 ] 0.02832709 0.99534860 > plotBMAforecast( probPrecip130103[,Ŕ"], lon=prcpGridData$lon, lat
Establishment of a New National Reference Ensemble of Water Triple Point Cells
NASA Astrophysics Data System (ADS)
Senn, Remo
2017-10-01
The results of the Bilateral Comparison EURAMET.T-K3.5 (w/VSL, The Netherlands) with the goal to link Switzerland's ITS-90 realization (Ar to Al) to the latest key comparisons gave strong indications for a discrepancy in the realization of the triple point of water. Due to the age of the cells of about twenty years, it was decided to replace the complete reference ensemble with new "state-of-the-art" cells. Three new water triple point cells from three different suppliers were purchased, as well as a new maintenance bath for an additional improvement of the realization. In several loops measurements were taken, each cell of both ensembles intercompared, and the deviations and characteristics determined. The measurements show a significant lower average value of the old ensemble of 0.59 ± 0.25 mK (k=2) in comparison with the new one. Likewise, the behavior of the old cells is very unstable with a drift downward during the realization of the triple point. Based on these results the impact of the new ensemble on the ITS-90 realization from Ar to Al was calculated and set in the context to performed calibrations and their related uncertainties in the past. This paper presents the instrumentation, cells, measurement procedure, results, uncertainties and impact of the new national reference ensemble of water triple point cells on the current ITS-90 realization in Switzerland.
DOE Office of Scientific and Technical Information (OSTI.GOV)
Erdmann, Thorsten; Albert, Philipp J.; Schwarz, Ulrich S.
2013-11-07
Non-processive molecular motors have to work together in ensembles in order to generate appreciable levels of force or movement. In skeletal muscle, for example, hundreds of myosin II molecules cooperate in thick filaments. In non-muscle cells, by contrast, small groups with few tens of non-muscle myosin II motors contribute to essential cellular processes such as transport, shape changes, or mechanosensing. Here we introduce a detailed and analytically tractable model for this important situation. Using a three-state crossbridge model for the myosin II motor cycle and exploiting the assumptions of fast power stroke kinetics and equal load sharing between motors inmore » equivalent states, we reduce the stochastic reaction network to a one-step master equation for the binding and unbinding dynamics (parallel cluster model) and derive the rules for ensemble movement. We find that for constant external load, ensemble dynamics is strongly shaped by the catch bond character of myosin II, which leads to an increase of the fraction of bound motors under load and thus to firm attachment even for small ensembles. This adaptation to load results in a concave force-velocity relation described by a Hill relation. For external load provided by a linear spring, myosin II ensembles dynamically adjust themselves towards an isometric state with constant average position and load. The dynamics of the ensembles is now determined mainly by the distribution of motors over the different kinds of bound states. For increasing stiffness of the external spring, there is a sharp transition beyond which myosin II can no longer perform the power stroke. Slow unbinding from the pre-power-stroke state protects the ensembles against detachment.« less
Multi-objective optimization for generating a weighted multi-model ensemble
NASA Astrophysics Data System (ADS)
Lee, H.
2017-12-01
Many studies have demonstrated that multi-model ensembles generally show better skill than each ensemble member. When generating weighted multi-model ensembles, the first step is measuring the performance of individual model simulations using observations. There is a consensus on the assignment of weighting factors based on a single evaluation metric. When considering only one evaluation metric, the weighting factor for each model is proportional to a performance score or inversely proportional to an error for the model. While this conventional approach can provide appropriate combinations of multiple models, the approach confronts a big challenge when there are multiple metrics under consideration. When considering multiple evaluation metrics, it is obvious that a simple averaging of multiple performance scores or model ranks does not address the trade-off problem between conflicting metrics. So far, there seems to be no best method to generate weighted multi-model ensembles based on multiple performance metrics. The current study applies the multi-objective optimization, a mathematical process that provides a set of optimal trade-off solutions based on a range of evaluation metrics, to combining multiple performance metrics for the global climate models and their dynamically downscaled regional climate simulations over North America and generating a weighted multi-model ensemble. NASA satellite data and the Regional Climate Model Evaluation System (RCMES) software toolkit are used for assessment of the climate simulations. Overall, the performance of each model differs markedly with strong seasonal dependence. Because of the considerable variability across the climate simulations, it is important to evaluate models systematically and make future projections by assigning optimized weighting factors to the models with relatively good performance. Our results indicate that the optimally weighted multi-model ensemble always shows better performance than an arithmetic ensemble mean and may provide reliable future projections.
Anderson, G.B.; Jones, B.; McGinnis, S.A.; Sanderson, B.
2015-01-01
Previous studies examining future changes in heat/cold waves using climate model ensembles have been limited to grid cell-average quantities. Here, we make use of an urban parameterization in the Community Earth System Model (CESM) that represents the urban heat island effect, which can exacerbate extreme heat but may ameliorate extreme cold in urban relative to rural areas. Heat/cold wave characteristics are derived for U.S. regions from a bias-corrected CESM 30-member ensemble for climate outcomes driven by the RCP8.5 forcing scenario and a 15-member ensemble driven by RCP4.5. Significant differences are found between urban and grid cell-average heat/cold wave characteristics. Most notably, urban heat waves for 1981–2005 are more intense than grid cell-average by 2.1°C (southeast) to 4.6°C (southwest), while cold waves are less intense. We assess the avoided climate impacts of urban heat/cold waves in 2061–2080 when following the lower forcing scenario. Urban heat wave days per year increase from 6 in 1981–2005 to up to 92 (southeast) in RCP8.5. Following RCP4.5 reduces heat wave days by about 50%. Large avoided impacts are demonstrated for individual communities; e.g., the longest heat wave for Houston in RCP4.5 is 38 days while in RCP8.5 there is one heat wave per year that is longer than a month with some lasting the entire summer. Heat waves also start later in the season in RCP4.5 (earliest are in early May) than RCP8.5 (mid-April), compared to 1981–2005 (late May). In some communities, cold wave events decrease from 2 per year for 1981–2005 to one-in-five year events in RCP4.5 and one-in-ten year events in RCP8.5. PMID:29520121
Variable diffusion in stock market fluctuations
NASA Astrophysics Data System (ADS)
Hua, Jia-Chen; Chen, Lijian; Falcon, Liberty; McCauley, Joseph L.; Gunaratne, Gemunu H.
2015-02-01
We analyze intraday fluctuations in several stock indices to investigate the underlying stochastic processes using techniques appropriate for processes with nonstationary increments. The five most actively traded stocks each contains two time intervals during the day where the variance of increments can be fit by power law scaling in time. The fluctuations in return within these intervals follow asymptotic bi-exponential distributions. The autocorrelation function for increments vanishes rapidly, but decays slowly for absolute and squared increments. Based on these results, we propose an intraday stochastic model with linear variable diffusion coefficient as a lowest order approximation to the real dynamics of financial markets, and to test the effects of time averaging techniques typically used for financial time series analysis. We find that our model replicates major stylized facts associated with empirical financial time series. We also find that ensemble averaging techniques can be used to identify the underlying dynamics correctly, whereas time averages fail in this task. Our work indicates that ensemble average approaches will yield new insight into the study of financial markets' dynamics. Our proposed model also provides new insight into the modeling of financial markets dynamics in microscopic time scales.
NASA Technical Reports Server (NTRS)
Latta, A. F.; Bowyer, J. M.; Fujita, T.
1979-01-01
This paper presents the performance and cost of four 10-MWe advanced solar thermal electric power plants sited in various regions of the continental United States. Each region has different insolation characteristics which result in varying collector field areas, plant performance, capital costs, and energy costs. The paraboloidal dish, central receiver, cylindrical parabolic trough, and compound parabolic concentrator (CPC) comprise the advanced concepts studied. This paper contains a discussion of the regional insolation data base, a description of the solar systems' performances and costs, and a presentation of a range for the forecast cost of conventional electricity by region and nationally over the next several decades.
Multi-model ensemble hydrologic prediction using Bayesian model averaging
NASA Astrophysics Data System (ADS)
Duan, Qingyun; Ajami, Newsha K.; Gao, Xiaogang; Sorooshian, Soroosh
2007-05-01
Multi-model ensemble strategy is a means to exploit the diversity of skillful predictions from different models. This paper studies the use of Bayesian model averaging (BMA) scheme to develop more skillful and reliable probabilistic hydrologic predictions from multiple competing predictions made by several hydrologic models. BMA is a statistical procedure that infers consensus predictions by weighing individual predictions based on their probabilistic likelihood measures, with the better performing predictions receiving higher weights than the worse performing ones. Furthermore, BMA provides a more reliable description of the total predictive uncertainty than the original ensemble, leading to a sharper and better calibrated probability density function (PDF) for the probabilistic predictions. In this study, a nine-member ensemble of hydrologic predictions was used to test and evaluate the BMA scheme. This ensemble was generated by calibrating three different hydrologic models using three distinct objective functions. These objective functions were chosen in a way that forces the models to capture certain aspects of the hydrograph well (e.g., peaks, mid-flows and low flows). Two sets of numerical experiments were carried out on three test basins in the US to explore the best way of using the BMA scheme. In the first set, a single set of BMA weights was computed to obtain BMA predictions, while the second set employed multiple sets of weights, with distinct sets corresponding to different flow intervals. In both sets, the streamflow values were transformed using Box-Cox transformation to ensure that the probability distribution of the prediction errors is approximately Gaussian. A split sample approach was used to obtain and validate the BMA predictions. The test results showed that BMA scheme has the advantage of generating more skillful and equally reliable probabilistic predictions than original ensemble. The performance of the expected BMA predictions in terms of daily root mean square error (DRMS) and daily absolute mean error (DABS) is generally superior to that of the best individual predictions. Furthermore, the BMA predictions employing multiple sets of weights are generally better than those using single set of weights.
Sea ice and oceanic processes on the Ross Sea continental shelf
NASA Technical Reports Server (NTRS)
Jacobs, S. S.; Comiso, J. C.
1989-01-01
The spatial and temporal variability of Antarctic sea ice concentrations on the Ross Sea continental shelf have been investigated in relation to oceanic and atmospheric forcing. Sea ice data were derived from Nimbus 7 scanning multichannel microwave radiometer (SMMR) brightness temperatures from 1979-1986. Ice cover over the shelf was persistently lower than above the adjacent deep ocean, averaging 86 percent during winter with little month-to-month of interannual variability. The large spring Ross Sea polynya on the western shelf results in a longer period of summer insolation, greater surface layer heat storage, and later ice formation in that region the following autumn.
International Data Base for the U.S. Renewable Energy Industry
DOE Office of Scientific and Technical Information (OSTI.GOV)
none
1986-05-01
The International Data Base for the US Renewable Energy Industry was developed to provide the US renewable energy industry with background data for identifying and analyzing promising foreign market opportunities for their products and services. Specifically, the data base provides the following information for 161 developed and developing countries: (1) General Country Data--consisting of general energy indicators; (2) Energy Demand Data--covering commercial primary energy consumption; (3) Energy Resource Data--identifying annual average insolation, wind power, and river flow data; (4) Power System Data--indicating a wide range of electrical parameters; and (5) Business Data--including currency and credit worthiness data.
Total probabilities of ensemble runoff forecasts
NASA Astrophysics Data System (ADS)
Olav Skøien, Jon; Bogner, Konrad; Salamon, Peter; Smith, Paul; Pappenberger, Florian
2016-04-01
Ensemble forecasting has for a long time been used as a method in meteorological modelling to indicate the uncertainty of the forecasts. However, as the ensembles often exhibit both bias and dispersion errors, it is necessary to calibrate and post-process them. Two of the most common methods for this are Bayesian Model Averaging (Raftery et al., 2005) and Ensemble Model Output Statistics (EMOS) (Gneiting et al., 2005). There are also methods for regionalizing these methods (Berrocal et al., 2007) and for incorporating the correlation between lead times (Hemri et al., 2013). Engeland and Steinsland Engeland and Steinsland (2014) developed a framework which can estimate post-processing parameters which are different in space and time, but still can give a spatially and temporally consistent output. However, their method is computationally complex for our larger number of stations, and cannot directly be regionalized in the way we would like, so we suggest a different path below. The target of our work is to create a mean forecast with uncertainty bounds for a large number of locations in the framework of the European Flood Awareness System (EFAS - http://www.efas.eu) We are therefore more interested in improving the forecast skill for high-flows rather than the forecast skill of lower runoff levels. EFAS uses a combination of ensemble forecasts and deterministic forecasts from different forecasters to force a distributed hydrologic model and to compute runoff ensembles for each river pixel within the model domain. Instead of showing the mean and the variability of each forecast ensemble individually, we will now post-process all model outputs to find a total probability, the post-processed mean and uncertainty of all ensembles. The post-processing parameters are first calibrated for each calibration location, but assuring that they have some spatial correlation, by adding a spatial penalty in the calibration process. This can in some cases have a slight negative impact on the calibration error, but makes it easier to interpolate the post-processing parameters to uncalibrated locations. We also look into different methods for handling the non-normal distributions of runoff data and the effect of different data transformations on forecasts skills in general and for floods in particular. Berrocal, V. J., Raftery, A. E. and Gneiting, T.: Combining Spatial Statistical and Ensemble Information in Probabilistic Weather Forecasts, Mon. Weather Rev., 135(4), 1386-1402, doi:10.1175/MWR3341.1, 2007. Engeland, K. and Steinsland, I.: Probabilistic postprocessing models for flow forecasts for a system of catchments and several lead times, Water Resour. Res., 50(1), 182-197, doi:10.1002/2012WR012757, 2014. Gneiting, T., Raftery, A. E., Westveld, A. H. and Goldman, T.: Calibrated Probabilistic Forecasting Using Ensemble Model Output Statistics and Minimum CRPS Estimation, Mon. Weather Rev., 133(5), 1098-1118, doi:10.1175/MWR2904.1, 2005. Hemri, S., Fundel, F. and Zappa, M.: Simultaneous calibration of ensemble river flow predictions over an entire range of lead times, Water Resour. Res., 49(10), 6744-6755, doi:10.1002/wrcr.20542, 2013. Raftery, A. E., Gneiting, T., Balabdaoui, F. and Polakowski, M.: Using Bayesian Model Averaging to Calibrate Forecast Ensembles, Mon. Weather Rev., 133(5), 1155-1174, doi:10.1175/MWR2906.1, 2005.
NASA Technical Reports Server (NTRS)
Davis, P. A.; Penn, L. M. (Principal Investigator)
1981-01-01
A technique is developed for the estimation of total daily insolation on the basis of data derivable from operational polar-orbiting satellites. Although surface insolation and meteorological observations are used in the development, the algorithm is constrained in application by the infrequent daytime polar-orbiter coverage.
NASA Technical Reports Server (NTRS)
Smith, J. H.
1980-01-01
A quick reference for obtaining estimates of available solar insolation for numerous locations and array angles is presented. A model and a computer program are provided which considered the effects of array shadowing reflector augmentation as design variables.
NASA Astrophysics Data System (ADS)
Cionco, Rodolfo Gustavo; Valentini, José Ernesto; Quaranta, Nancy Esther; Soon, Willie W.-H.
2018-01-01
We present a new set of solar radiation forcing that now incorporated not only the gravitational perturbation of the Sun-Earth-Moon geometrical orbits but also the intrinsic solar magnetic modulation of the total solar irradiance (TSI). This new dataset, covering the past 2000 years as well as a forward projection for about 100 years based on recent result by Velasco-Herrera et al. (2015), should provide a realistic basis to examine and evaluate the role of external solar forcing on Earth climate on decadal, multidecadal to multicentennial timescales. A second goal of this paper is to propose both in situ insolation forcing variable and the latitudinal insolation gradients (LIG) as two key metrics that are subjected to a deterministic modulation by lunar nodal cycle which are often confused with tidal forcing impacts as assumed and interpreted in previous studies of instrumental and paleoclimatic records. Our new results and datasets are made publicly available for all at PANGAEA site.
NASA Astrophysics Data System (ADS)
Hart, E. K.; Jacobson, M. Z.; Dvorak, M. J.
2008-12-01
Time series power flow analyses of the California electricity grid are performed with extensive addition of intermittent renewable power. The study focuses on the effects of replacing non-renewable and imported (out-of-state) electricity with wind and solar power on the reliability of the transmission grid. Simulations are performed for specific days chosen throughout the year to capture seasonal fluctuations in load, wind, and insolation. Wind farm expansions and new wind farms are proposed based on regional wind resources and time-dependent wind power output is calculated using a meteorological model and the power curves of specific wind turbines. Solar power is incorporated both as centralized and distributed generation. Concentrating solar thermal plants are modeled using local insolation data and the efficiencies of pre-existing plants. Distributed generation from rooftop PV systems is included using regional insolation data, efficiencies of common PV systems, and census data. The additional power output of these technologies offsets power from large natural gas plants and is balanced for the purposes of load matching largely with hydroelectric power and by curtailment when necessary. A quantitative analysis of the effects of this significant shift in the electricity portfolio of the state of California on power availability and transmission line congestion, using a transmission load-flow model, is presented. A sensitivity analysis is also performed to determine the effects of forecasting errors in wind and insolation on load-matching and transmission line congestion.
Almeida, Josiane S; Vanderlei, Franciele M; Pastre, Eliane C; Martins, Rodrigo A D M; Padovani, Carlos R; Filho, Guaracy C
2016-06-01
The aim of the present study was to assess plantar pressure distribution and musculoskeletal symptoms following the use of customized insoles among female assembly line workers. The study included 29 female assembly line workers (age, 29.76 ± 5.79 years; weight, 63.79 ± 12.11 kg) with musculoskeletal symptoms who work predominantly while standing. The Nordic Musculoskeletal Questionnaire was administered to the study population. Plantar pressure was determined using a computerized plantar pressure feedback system. A control group (n=13) used ethylvinylacetate insoles (Podaly®) that were individually heat molded and heat glued. The intervention group (n=14) also used the insoles and a strip of the same material was added to the site of greatest plantar pressure as determined by the electronic feedback device. After five weeks, the plantar pressure data were collected again and the questionnaire was administered a second time. There was no significant difference between groups with regard to pain in any anatomic site. However, within each group the lumbar region exhibited a reduction in symptoms in the intervention group (P<0.05), and the feet exhibited a reduction in symptoms in both groups (P<0.05). Mean plantar pressure increased and plantar surface decreased in the intervention group (P<0.05). Insoles increased foot comfort in both groups. However, the added strip did not significantly modify either plantar pressure or other symptoms in female workers. © 2016 Marshfield Clinic.
NASA Astrophysics Data System (ADS)
Grant, K. M.; Grimm, R.; Mikolajewicz, U.; Marino, G.; Ziegler, M.; Rohling, E. J.
2016-05-01
The Mediterranean basin is sensitive to global sea-level changes and African monsoon variability on orbital timescales. Both of these processes are thought to be important to the deposition of organic-rich sediment layers or 'sapropels' throughout the eastern Mediterranean, yet their relative influences remain ambiguous. A related issue is that an assumed 3-kyr lag between boreal insolation maxima and sapropel mid-points remains to be tested. Here we present new geochemical and ice-volume-corrected planktonic foraminiferal stable isotope records for sapropels S1 (Holocene), S3, S4, and S5 (Marine Isotope Stage 5) in core LC21 from the southern Aegean Sea. The records have a radiometrically constrained chronology that has already been synchronised with the Red Sea relative sea-level record, and this allows detailed examination of the timing of sapropel deposition relative to insolation, sea-level, and African monsoon changes. We find that sapropel onset was near-synchronous with monsoon run-off into the eastern Mediterranean, but that insolation-sapropel/monsoon phasings were not systematic through the last glacial cycle. These latter phasings instead appear to relate to sea-level changes. We propose that persistent meltwater discharges into the North Atlantic (e.g., at glacial terminations) modified the timing of sapropel deposition by delaying the timing of peak African monsoon run-off. These observations may reconcile apparent model-data offsets with respect to the orbital pacing of the African monsoon. Our observations also imply that the previous assumption of a systematic 3-kyr lag between insolation maxima and sapropel midpoints may lead to overestimated insolation-sapropel phasings. Finally, we surmise that both sea-level rise and monsoon run-off contributed to surface-water buoyancy changes at times of sapropel deposition, and their relative influences differed per sapropel case, depending on their magnitudes. Sea-level rise was clearly important for sapropel S1, whereas monsoon forcing was more important for sapropels S3, S4, and S5.
Hsieh, Ru-Lan; Peng, Hui-Ling; Lee, Wen-Chung
2018-05-01
Limited evidence is available regarding the effects of insoles on pediatric flexible flatfoot because of the heterogeneity and low methodological quality of previous studies. The purpose of this prospective trial is to examine the short-term effects of customized arch support insoles on symptomatic flexible flatfoot in children by using the International Classification of Functioning, randomized controlled Disability, and Health (ICF) framework. This study was conducted in a rehabilitation outpatient clinic of a teaching hospital. Fifty-two children with symptomatic flexible flatfoot were included. The children in the treatment group wore customized arch support insoles for 12 weeks, whereas those in the control group did not wear the insoles. Both clinical and radiographic measurements, including the navicular drop, foot posture index, Beighton hypermobility score, talonavicular coverage angle, calcaneal inclination angle, and calcaneal-first metatarsal angle, were used for diagnosing flexible flatfoot. Physical activity (10-m normal and fast walking, stair ascent, stair descent, and chair rising), physical function, and psychometric properties (Pediatric Outcome Data Collection Instrument and Pediatric Quality of Life Inventory) were evaluated at the baseline and 12 weeks after the intervention. Compared with the control group, the treatment group exhibited significant improvement in pain/comfort (P = .048), physical health (P = .035), stair ascent time (P = .015), upper extremity and physical function (P = .016), and transfer and basic mobility (P = .042) during the intervention period. Children with flexible flatfoot who wore customized arch support insoles for 12 weeks exhibited significantly improved pain/comfort, physical health, stair ascent time, upper extremity and physical function, and transfer and basic mobility. These variables belong to the domains of body functions and structures and activity and participation in the ICF framework. However, because the groups were not comparable, additional studies with larger sample sizes should be conducted.
Stratospheric aerosol geoengineering
DOE Office of Scientific and Technical Information (OSTI.GOV)
Robock, Alan
2015-03-30
The Geoengineering Model Intercomparison Project, conducting climate model experiments with standard stratospheric aerosol injection scenarios, has found that insolation reduction could keep the global average temperature constant, but global average precipitation would reduce, particularly in summer monsoon regions around the world. Temperature changes would also not be uniform; the tropics would cool, but high latitudes would warm, with continuing, but reduced sea ice and ice sheet melting. Temperature extremes would still increase, but not as much as without geoengineering. If geoengineering were halted all at once, there would be rapid temperature and precipitation increases at 5–10 times the rates frommore » gradual global warming. The prospect of geoengineering working may reduce the current drive toward reducing greenhouse gas emissions, and there are concerns about commercial or military control. Because geoengineering cannot safely address climate change, global efforts to reduce greenhouse gas emissions and to adapt are crucial to address anthropogenic global warming.« less
Possibilities and limitations of wind energy utilisation
NASA Astrophysics Data System (ADS)
Feustel, J.
1981-10-01
The existing wind resource, the most favorable locations, applications, and designs of windpowered generators are reviewed, along with descriptions of current and historic wind turbines and lines of research. Coastal regions, plains, hill summits, and mountains with funneling regions are noted to have the highest annual wind averages, with energy densities exceeding the annual solar insolation at average wind speeds of 5-7.9 m/sec. Applications for utility-grade power production, for irrigation, for mechanical heat production, and for pumped storage in water towers or reservoirs are mentioned, as well as electrical power production in remote areas and for hydrogen production by electrolysis. Power coefficients are discussed, with attention given to the German Growian 3 MW machine. It is shown that the least economically sound wind turbines, the machines with outputs below 100 kW, can vie with diesel plant economics in a good wind regime if the wind turbine operates for 15 yr.
NASA Astrophysics Data System (ADS)
1982-02-01
Performance data for the month of January, 1982 for a grid connected photovoltaic power supply in Massachusetts are presented. Data include: monthly and daily electrical energy produced; monthly and daily solar energy incident on the array; monthly and daily array efficiency; plots of energy produced as a function of power level, voltage, cell temperature and time of day; power conditioner input, output and efficiency for each of two individual units and for the total power conditioning system; photovoltaic system efficiency; capacity factor; PV system to load and grid to load energies and corresponding dollar values; daily energy supplies to the load by the PV system; daily PV system availability; monthly and hourly insolation; monthly and hourly temperature average; monthly and hourly wind speed; wind direction distribution; average heating and cooling degree days; number of freeze/thaw cycles; and the data acquisition mode and recording interval plot.
Multi-criterion model ensemble of CMIP5 surface air temperature over China
NASA Astrophysics Data System (ADS)
Yang, Tiantian; Tao, Yumeng; Li, Jingjing; Zhu, Qian; Su, Lu; He, Xiaojia; Zhang, Xiaoming
2018-05-01
The global circulation models (GCMs) are useful tools for simulating climate change, projecting future temperature changes, and therefore, supporting the preparation of national climate adaptation plans. However, different GCMs are not always in agreement with each other over various regions. The reason is that GCMs' configurations, module characteristics, and dynamic forcings vary from one to another. Model ensemble techniques are extensively used to post-process the outputs from GCMs and improve the variability of model outputs. Root-mean-square error (RMSE), correlation coefficient (CC, or R) and uncertainty are commonly used statistics for evaluating the performances of GCMs. However, the simultaneous achievements of all satisfactory statistics cannot be guaranteed in using many model ensemble techniques. In this paper, we propose a multi-model ensemble framework, using a state-of-art evolutionary multi-objective optimization algorithm (termed MOSPD), to evaluate different characteristics of ensemble candidates and to provide comprehensive trade-off information for different model ensemble solutions. A case study of optimizing the surface air temperature (SAT) ensemble solutions over different geographical regions of China is carried out. The data covers from the period of 1900 to 2100, and the projections of SAT are analyzed with regard to three different statistical indices (i.e., RMSE, CC, and uncertainty). Among the derived ensemble solutions, the trade-off information is further analyzed with a robust Pareto front with respect to different statistics. The comparison results over historical period (1900-2005) show that the optimized solutions are superior over that obtained simple model average, as well as any single GCM output. The improvements of statistics are varying for different climatic regions over China. Future projection (2006-2100) with the proposed ensemble method identifies that the largest (smallest) temperature changes will happen in the South Central China (the Inner Mongolia), the North Eastern China (the South Central China), and the North Western China (the South Central China), under RCP 2.6, RCP 4.5, and RCP 8.5 scenarios, respectively.
NIMEFI: Gene Regulatory Network Inference using Multiple Ensemble Feature Importance Algorithms
Ruyssinck, Joeri; Huynh-Thu, Vân Anh; Geurts, Pierre; Dhaene, Tom; Demeester, Piet; Saeys, Yvan
2014-01-01
One of the long-standing open challenges in computational systems biology is the topology inference of gene regulatory networks from high-throughput omics data. Recently, two community-wide efforts, DREAM4 and DREAM5, have been established to benchmark network inference techniques using gene expression measurements. In these challenges the overall top performer was the GENIE3 algorithm. This method decomposes the network inference task into separate regression problems for each gene in the network in which the expression values of a particular target gene are predicted using all other genes as possible predictors. Next, using tree-based ensemble methods, an importance measure for each predictor gene is calculated with respect to the target gene and a high feature importance is considered as putative evidence of a regulatory link existing between both genes. The contribution of this work is twofold. First, we generalize the regression decomposition strategy of GENIE3 to other feature importance methods. We compare the performance of support vector regression, the elastic net, random forest regression, symbolic regression and their ensemble variants in this setting to the original GENIE3 algorithm. To create the ensemble variants, we propose a subsampling approach which allows us to cast any feature selection algorithm that produces a feature ranking into an ensemble feature importance algorithm. We demonstrate that the ensemble setting is key to the network inference task, as only ensemble variants achieve top performance. As second contribution, we explore the effect of using rankwise averaged predictions of multiple ensemble algorithms as opposed to only one. We name this approach NIMEFI (Network Inference using Multiple Ensemble Feature Importance algorithms) and show that this approach outperforms all individual methods in general, although on a specific network a single method can perform better. An implementation of NIMEFI has been made publicly available. PMID:24667482
DOE Office of Scientific and Technical Information (OSTI.GOV)
Ajami, N K; Duan, Q; Gao, X
2005-04-11
This paper examines several multi-model combination techniques: the Simple Multi-model Average (SMA), the Multi-Model Super Ensemble (MMSE), Modified Multi-Model Super Ensemble (M3SE) and the Weighted Average Method (WAM). These model combination techniques were evaluated using the results from the Distributed Model Intercomparison Project (DMIP), an international project sponsored by the National Weather Service (NWS) Office of Hydrologic Development (OHD). All of the multi-model combination results were obtained using uncalibrated DMIP model outputs and were compared against the best uncalibrated as well as the best calibrated individual model results. The purpose of this study is to understand how different combination techniquesmore » affect the skill levels of the multi-model predictions. This study revealed that the multi-model predictions obtained from uncalibrated single model predictions are generally better than any single member model predictions, even the best calibrated single model predictions. Furthermore, more sophisticated multi-model combination techniques that incorporated bias correction steps work better than simple multi-model average predictions or multi-model predictions without bias correction.« less
Metainference: A Bayesian inference method for heterogeneous systems.
Bonomi, Massimiliano; Camilloni, Carlo; Cavalli, Andrea; Vendruscolo, Michele
2016-01-01
Modeling a complex system is almost invariably a challenging task. The incorporation of experimental observations can be used to improve the quality of a model and thus to obtain better predictions about the behavior of the corresponding system. This approach, however, is affected by a variety of different errors, especially when a system simultaneously populates an ensemble of different states and experimental data are measured as averages over such states. To address this problem, we present a Bayesian inference method, called "metainference," that is able to deal with errors in experimental measurements and with experimental measurements averaged over multiple states. To achieve this goal, metainference models a finite sample of the distribution of models using a replica approach, in the spirit of the replica-averaging modeling based on the maximum entropy principle. To illustrate the method, we present its application to a heterogeneous model system and to the determination of an ensemble of structures corresponding to the thermal fluctuations of a protein molecule. Metainference thus provides an approach to modeling complex systems with heterogeneous components and interconverting between different states by taking into account all possible sources of errors.
Synchronized Trajectories in a Climate "Supermodel"
NASA Astrophysics Data System (ADS)
Duane, Gregory; Schevenhoven, Francine; Selten, Frank
2017-04-01
Differences in climate projections among state-of-the-art models can be resolved by connecting the models in run-time, either through inter-model nudging or by directly combining the tendencies for corresponding variables. Since it is clearly established that averaging model outputs typically results in improvement as compared to any individual model output, averaged re-initializations at typical analysis time intervals also seems appropriate. The resulting "supermodel" is more like a single model than it is like an ensemble, because the constituent models tend to synchronize even with limited inter-model coupling. Thus one can examine the properties of specific trajectories, rather than averaging the statistical properties of the separate models. We apply this strategy to a study of the index cycle in a supermodel constructed from several imperfect copies of the SPEEDO model (a global primitive-equation atmosphere-ocean-land climate model). As with blocking frequency, typical weather statistics of interest like probabilities of heat waves or extreme precipitation events, are improved as compared to the standard multi-model ensemble approach. In contrast to the standard approach, the supermodel approach provides detailed descriptions of typical actual events.
NASA Technical Reports Server (NTRS)
Chyu, Wei J.; Rimlinger, Mark J.; Shih, Tom I.-P.
1993-01-01
A numerical study was performed to investigate 3D shock-wave/boundary-layer interactions on a flat plate with bleed through one or more circular holes that vent into a plenum. This study was focused on how bleed-hole geometry and pressure ratio across bleed holes affect the bleed rate and the physics of the flow in the vicinity of the holes. The aspects of the bleed-hole geometry investigated include angle of bleed hole and the number of bleed holes. The plenum/freestream pressure ratios investigated range from 0.3 to 1.7. This study is based on the ensemble-averaged, 'full compressible' Navier-Stokes (N-S) equations closed by the Baldwin-Lomax algebraic turbulence model. Solutions to the ensemble-averaged N-S equations were obtained by an implicit finite-volume method using the partially-split, two-factored algorithm of Steger on an overlapping Chimera grid.
Optimized nested Markov chain Monte Carlo sampling: theory
DOE Office of Scientific and Technical Information (OSTI.GOV)
Coe, Joshua D; Shaw, M Sam; Sewell, Thomas D
2009-01-01
Metropolis Monte Carlo sampling of a reference potential is used to build a Markov chain in the isothermal-isobaric ensemble. At the endpoints of the chain, the energy is reevaluated at a different level of approximation (the 'full' energy) and a composite move encompassing all of the intervening steps is accepted on the basis of a modified Metropolis criterion. By manipulating the thermodynamic variables characterizing the reference system we maximize the average acceptance probability of composite moves, lengthening significantly the random walk made between consecutive evaluations of the full energy at a fixed acceptance probability. This provides maximally decorrelated samples ofmore » the full potential, thereby lowering the total number required to build ensemble averages of a given variance. The efficiency of the method is illustrated using model potentials appropriate to molecular fluids at high pressure. Implications for ab initio or density functional theory (DFT) treatment are discussed.« less
Life under the Microscope: Single-Molecule Fluorescence Highlights the RNA World.
Ray, Sujay; Widom, Julia R; Walter, Nils G
2018-04-25
The emergence of single-molecule (SM) fluorescence techniques has opened up a vast new toolbox for exploring the molecular basis of life. The ability to monitor individual biomolecules in real time enables complex, dynamic folding pathways to be interrogated without the averaging effect of ensemble measurements. In parallel, modern biology has been revolutionized by our emerging understanding of the many functions of RNA. In this comprehensive review, we survey SM fluorescence approaches and discuss how the application of these tools to RNA and RNA-containing macromolecular complexes in vitro has yielded significant insights into the underlying biology. Topics covered include the three-dimensional folding landscapes of a plethora of isolated RNA molecules, their assembly and interactions in RNA-protein complexes, and the relation of these properties to their biological functions. In all of these examples, the use of SM fluorescence methods has revealed critical information beyond the reach of ensemble averages.
Almost sure convergence in quantum spin glasses
DOE Office of Scientific and Technical Information (OSTI.GOV)
Buzinski, David, E-mail: dab197@case.edu; Meckes, Elizabeth, E-mail: elizabeth.meckes@case.edu
2015-12-15
Recently, Keating, Linden, and Wells [Markov Processes Relat. Fields 21(3), 537-555 (2015)] showed that the density of states measure of a nearest-neighbor quantum spin glass model is approximately Gaussian when the number of particles is large. The density of states measure is the ensemble average of the empirical spectral measure of a random matrix; in this paper, we use concentration of measure and entropy techniques together with the result of Keating, Linden, and Wells to show that in fact the empirical spectral measure of such a random matrix is almost surely approximately Gaussian itself with no ensemble averaging. We alsomore » extend this result to a spherical quantum spin glass model and to the more general coupling geometries investigated by Erdős and Schröder [Math. Phys., Anal. Geom. 17(3-4), 441–464 (2014)].« less
Typical performance of approximation algorithms for NP-hard problems
NASA Astrophysics Data System (ADS)
Takabe, Satoshi; Hukushima, Koji
2016-11-01
Typical performance of approximation algorithms is studied for randomized minimum vertex cover problems. A wide class of random graph ensembles characterized by an arbitrary degree distribution is discussed with the presentation of a theoretical framework. Herein, three approximation algorithms are examined: linear-programming relaxation, loopy-belief propagation, and the leaf-removal algorithm. The former two algorithms are analyzed using a statistical-mechanical technique, whereas the average-case analysis of the last one is conducted using the generating function method. These algorithms have a threshold in the typical performance with increasing average degree of the random graph, below which they find true optimal solutions with high probability. Our study reveals that there exist only three cases, determined by the order of the typical performance thresholds. In addition, we provide some conditions for classification of the graph ensembles and demonstrate explicitly some examples for the difference in thresholds.
Differences in single and aggregated nanoparticle plasmon spectroscopy.
Singh, Pushkar; Deckert-Gaudig, Tanja; Schneidewind, Henrik; Kirsch, Konstantin; van Schrojenstein Lantman, Evelien M; Weckhuysen, Bert M; Deckert, Volker
2015-02-07
Vibrational spectroscopy usually provides structural information averaged over many molecules. We report a larger peak position variation and reproducibly smaller FWHM of TERS spectra compared to SERS spectra indicating that the number of molecules excited in a TERS experiment is extremely low. Thus, orientational averaging effects are suppressed and micro ensembles are investigated. This is shown for a thiophenol molecule adsorbed on Au nanoplates and nanoparticles.
García-Hernández, César; Sánchez-Álvarez, Eduardo J; Huertas-Talón, José-Luis
2016-01-01
This research is based on the development of a human foot model to study the temperature conditions of a foot bottom surface under extreme external conditions. This foot model is made by combining different manufacturing techniques to enable the simulation of bones and tissues, allowing the placement of sensors on its surface to track the temperature values of different points inside a shoe. These sensors let researchers capture valuable data during a defined period of time, making it possible to compare the features of different safety boots, socks or soles, among others. In this case, it has been applied to compare different plantar insole materials, placed into safety boots on a high-temperature surface.
NASA Astrophysics Data System (ADS)
Pantillon, Florian; Knippertz, Peter; Corsmeier, Ulrich
2017-10-01
New insights into the synoptic-scale predictability of 25 severe European winter storms of the 1995-2015 period are obtained using the homogeneous ensemble reforecast dataset from the European Centre for Medium-Range Weather Forecasts. The predictability of the storms is assessed with different metrics including (a) the track and intensity to investigate the storms' dynamics and (b) the Storm Severity Index to estimate the impact of the associated wind gusts. The storms are well predicted by the whole ensemble up to 2-4 days ahead. At longer lead times, the number of members predicting the observed storms decreases and the ensemble average is not clearly defined for the track and intensity. The Extreme Forecast Index and Shift of Tails are therefore computed from the deviation of the ensemble from the model climate. Based on these indices, the model has some skill in forecasting the area covered by extreme wind gusts up to 10 days, which indicates a clear potential for early warnings. However, large variability is found between the individual storms. The poor predictability of outliers appears related to their physical characteristics such as explosive intensification or small size. Longer datasets with more cases would be needed to further substantiate these points.
Single Aerosol Particle Studies Using Optical Trapping Raman And Cavity Ringdown Spectroscopy
NASA Astrophysics Data System (ADS)
Gong, Z.; Wang, C.; Pan, Y. L.; Videen, G.
2017-12-01
Due to the physical and chemical complexity of aerosol particles and the interdisciplinary nature of aerosol science that involves physics, chemistry, and biology, our knowledge of aerosol particles is rather incomplete; our current understanding of aerosol particles is limited by averaged (over size, composition, shape, and orientation) and/or ensemble (over time, size, and multi-particles) measurements. Physically, single aerosol particles are the fundamental units of any large aerosol ensembles. Chemically, single aerosol particles carry individual chemical components (properties and constituents) in particle ensemble processes. Therefore, the study of single aerosol particles can bridge the gap between aerosol ensembles and bulk/surface properties and provide a hierarchical progression from a simple benchmark single-component system to a mixed-phase multicomponent system. A single aerosol particle can be an effective reactor to study heterogeneous surface chemistry in multiple phases. Latest technological advances provide exciting new opportunities to study single aerosol particles and to further develop single aerosol particle instrumentation. We present updates on our recent studies of single aerosol particles optically trapped in air using the optical-trapping Raman and cavity ringdown spectroscopy.
Cortical ensemble activity increasingly predicts behaviour outcomes during learning of a motor task
NASA Astrophysics Data System (ADS)
Laubach, Mark; Wessberg, Johan; Nicolelis, Miguel A. L.
2000-06-01
When an animal learns to make movements in response to different stimuli, changes in activity in the motor cortex seem to accompany and underlie this learning. The precise nature of modifications in cortical motor areas during the initial stages of motor learning, however, is largely unknown. Here we address this issue by chronically recording from neuronal ensembles located in the rat motor cortex, throughout the period required for rats to learn a reaction-time task. Motor learning was demonstrated by a decrease in the variance of the rats' reaction times and an increase in the time the animals were able to wait for a trigger stimulus. These behavioural changes were correlated with a significant increase in our ability to predict the correct or incorrect outcome of single trials based on three measures of neuronal ensemble activity: average firing rate, temporal patterns of firing, and correlated firing. This increase in prediction indicates that an association between sensory cues and movement emerged in the motor cortex as the task was learned. Such modifications in cortical ensemble activity may be critical for the initial learning of motor tasks.
Decimated Input Ensembles for Improved Generalization
NASA Technical Reports Server (NTRS)
Tumer, Kagan; Oza, Nikunj C.; Norvig, Peter (Technical Monitor)
1999-01-01
Recently, many researchers have demonstrated that using classifier ensembles (e.g., averaging the outputs of multiple classifiers before reaching a classification decision) leads to improved performance for many difficult generalization problems. However, in many domains there are serious impediments to such "turnkey" classification accuracy improvements. Most notable among these is the deleterious effect of highly correlated classifiers on the ensemble performance. One particular solution to this problem is generating "new" training sets by sampling the original one. However, with finite number of patterns, this causes a reduction in the training patterns each classifier sees, often resulting in considerably worsened generalization performance (particularly for high dimensional data domains) for each individual classifier. Generally, this drop in the accuracy of the individual classifier performance more than offsets any potential gains due to combining, unless diversity among classifiers is actively promoted. In this work, we introduce a method that: (1) reduces the correlation among the classifiers; (2) reduces the dimensionality of the data, thus lessening the impact of the 'curse of dimensionality'; and (3) improves the classification performance of the ensemble.
CABS-flex predictions of protein flexibility compared with NMR ensembles
Jamroz, Michal; Kolinski, Andrzej; Kmiecik, Sebastian
2014-01-01
Motivation: Identification of flexible regions of protein structures is important for understanding of their biological functions. Recently, we have developed a fast approach for predicting protein structure fluctuations from a single protein model: the CABS-flex. CABS-flex was shown to be an efficient alternative to conventional all-atom molecular dynamics (MD). In this work, we evaluate CABS-flex and MD predictions by comparison with protein structural variations within NMR ensembles. Results: Based on a benchmark set of 140 proteins, we show that the relative fluctuations of protein residues obtained from CABS-flex are well correlated to those of NMR ensembles. On average, this correlation is stronger than that between MD and NMR ensembles. In conclusion, CABS-flex is useful and complementary to MD in predicting protein regions that undergo conformational changes as well as the extent of such changes. Availability and implementation: The CABS-flex is freely available to all users at http://biocomp.chem.uw.edu.pl/CABSflex. Contact: sekmi@chem.uw.edu.pl Supplementary information: Supplementary data are available at Bioinformatics online. PMID:24735558
CABS-flex predictions of protein flexibility compared with NMR ensembles.
Jamroz, Michal; Kolinski, Andrzej; Kmiecik, Sebastian
2014-08-01
Identification of flexible regions of protein structures is important for understanding of their biological functions. Recently, we have developed a fast approach for predicting protein structure fluctuations from a single protein model: the CABS-flex. CABS-flex was shown to be an efficient alternative to conventional all-atom molecular dynamics (MD). In this work, we evaluate CABS-flex and MD predictions by comparison with protein structural variations within NMR ensembles. Based on a benchmark set of 140 proteins, we show that the relative fluctuations of protein residues obtained from CABS-flex are well correlated to those of NMR ensembles. On average, this correlation is stronger than that between MD and NMR ensembles. In conclusion, CABS-flex is useful and complementary to MD in predicting protein regions that undergo conformational changes as well as the extent of such changes. The CABS-flex is freely available to all users at http://biocomp.chem.uw.edu.pl/CABSflex. sekmi@chem.uw.edu.pl Supplementary data are available at Bioinformatics online. © The Author 2014. Published by Oxford University Press.
Predicting drug-induced liver injury using ensemble learning methods and molecular fingerprints.
Ai, Haixin; Chen, Wen; Zhang, Li; Huang, Liangchao; Yin, Zimo; Hu, Huan; Zhao, Qi; Zhao, Jian; Liu, Hongsheng
2018-05-21
Drug-induced liver injury (DILI) is a major safety concern in the drug-development process, and various methods have been proposed to predict the hepatotoxicity of compounds during the early stages of drug trials. In this study, we developed an ensemble model using three machine learning algorithms and 12 molecular fingerprints from a dataset containing 1,241 diverse compounds. The ensemble model achieved an average accuracy of 71.1±2.6%, sensitivity of 79.9±3.6%, specificity of 60.3±4.8%, and area under the receiver operating characteristic curve (AUC) of 0.764±0.026 in five-fold cross-validation and an accuracy of 84.3%, sensitivity of 86.9%, specificity of 75.4%, and AUC of 0.904 in an external validation dataset of 286 compounds collected from the Liver Toxicity Knowledge Base (LTKB). Compared with previous methods, the ensemble model achieved relatively high accuracy and sensitivity. We also identified several substructures related to DILI. In addition, we provide a web server offering access to our models (http://ccsipb.lnu.edu.cn/toxicity/HepatoPred-EL/).
DOE Office of Scientific and Technical Information (OSTI.GOV)
Petkov, Valeri; Prasai, Binay; Shastri, Sarvjit
2017-09-12
Practical applications require the production and usage of metallic nanocrystals (NCs) in large ensembles. Besides, due to their cluster-bulk solid duality, metallic NCs exhibit a large degree of structural diversity. This poses the question as to what atomic-scale basis is to be used when the structure–function relationship for metallic NCs is to be quantified precisely. In this paper, we address the question by studying bi-functional Fe core-Pt skin type NCs optimized for practical applications. In particular, the cluster-like Fe core and skin-like Pt surface of the NCs exhibit superparamagnetic properties and a superb catalytic activity for the oxygen reduction reaction,more » respectively. We determine the atomic-scale structure of the NCs by non-traditional resonant high-energy X-ray diffraction coupled to atomic pair distribution function analysis. Using the experimental structure data we explain the observed magnetic and catalytic behavior of the NCs in a quantitative manner. Lastly, we demonstrate that NC ensemble-averaged 3D positions of atoms obtained by advanced X-ray scattering techniques are a very proper basis for not only establishing but also quantifying the structure–function relationship for the increasingly complex metallic NCs explored for practical applications.« less
Ensemble averaging and stacking of ARIMA and GSTAR model for rainfall forecasting
NASA Astrophysics Data System (ADS)
Anggraeni, D.; Kurnia, I. F.; Hadi, A. F.
2018-04-01
Unpredictable rainfall changes can affect human activities, such as in agriculture, aviation, shipping which depend on weather forecasts. Therefore, we need forecasting tools with high accuracy in predicting the rainfall in the future. This research focus on local forcasting of the rainfall at Jember in 2005 until 2016, from 77 rainfall stations. The rainfall here was not only related to the occurrence of the previous of its stations, but also related to others, it’s called the spatial effect. The aim of this research is to apply the GSTAR model, to determine whether there are some correlations of spatial effect between one to another stations. The GSTAR model is an expansion of the space-time model that combines the time-related effects, the locations (stations) in a time series effects, and also the location it self. The GSTAR model will also be compared to the ARIMA model that completely ignores the independent variables. The forcested value of the ARIMA and of the GSTAR models then being combined using the ensemble forecasting technique. The averaging and stacking method of ensemble forecasting method here provide us the best model with higher acuracy model that has the smaller RMSE (Root Mean Square Error) value. Finally, with the best model we can offer a better local rainfall forecasting in Jember for the future.
A framework of multitemplate ensemble for fingerprint verification
NASA Astrophysics Data System (ADS)
Yin, Yilong; Ning, Yanbin; Ren, Chunxiao; Liu, Li
2012-12-01
How to improve performance of an automatic fingerprint verification system (AFVS) is always a big challenge in biometric verification field. Recently, it becomes popular to improve the performance of AFVS using ensemble learning approach to fuse related information of fingerprints. In this article, we propose a novel framework of fingerprint verification which is based on the multitemplate ensemble method. This framework is consisted of three stages. In the first stage, enrollment stage, we adopt an effective template selection method to select those fingerprints which best represent a finger, and then, a polyhedron is created by the matching results of multiple template fingerprints and a virtual centroid of the polyhedron is given. In the second stage, verification stage, we measure the distance between the centroid of the polyhedron and a query image. In the final stage, a fusion rule is used to choose a proper distance from a distance set. The experimental results on the FVC2004 database prove the improvement on the effectiveness of the new framework in fingerprint verification. With a minutiae-based matching method, the average EER of four databases in FVC2004 drops from 10.85 to 0.88, and with a ridge-based matching method, the average EER of these four databases also decreases from 14.58 to 2.51.
An Intelligent Ensemble Neural Network Model for Wind Speed Prediction in Renewable Energy Systems.
Ranganayaki, V; Deepa, S N
2016-01-01
Various criteria are proposed to select the number of hidden neurons in artificial neural network (ANN) models and based on the criterion evolved an intelligent ensemble neural network model is proposed to predict wind speed in renewable energy applications. The intelligent ensemble neural model based wind speed forecasting is designed by averaging the forecasted values from multiple neural network models which includes multilayer perceptron (MLP), multilayer adaptive linear neuron (Madaline), back propagation neural network (BPN), and probabilistic neural network (PNN) so as to obtain better accuracy in wind speed prediction with minimum error. The random selection of hidden neurons numbers in artificial neural network results in overfitting or underfitting problem. This paper aims to avoid the occurrence of overfitting and underfitting problems. The selection of number of hidden neurons is done in this paper employing 102 criteria; these evolved criteria are verified by the computed various error values. The proposed criteria for fixing hidden neurons are validated employing the convergence theorem. The proposed intelligent ensemble neural model is applied for wind speed prediction application considering the real time wind data collected from the nearby locations. The obtained simulation results substantiate that the proposed ensemble model reduces the error value to minimum and enhances the accuracy. The computed results prove the effectiveness of the proposed ensemble neural network (ENN) model with respect to the considered error factors in comparison with that of the earlier models available in the literature.
An ensemble predictive modeling framework for breast cancer classification.
Nagarajan, Radhakrishnan; Upreti, Meenakshi
2017-12-01
Molecular changes often precede clinical presentation of diseases and can be useful surrogates with potential to assist in informed clinical decision making. Recent studies have demonstrated the usefulness of modeling approaches such as classification that can predict the clinical outcomes from molecular expression profiles. While useful, a majority of these approaches implicitly use all molecular markers as features in the classification process often resulting in sparse high-dimensional projection of the samples often comparable to that of the sample size. In this study, a variant of the recently proposed ensemble classification approach is used for predicting good and poor-prognosis breast cancer samples from their molecular expression profiles. In contrast to traditional single and ensemble classifiers, the proposed approach uses multiple base classifiers with varying feature sets obtained from two-dimensional projection of the samples in conjunction with a majority voting strategy for predicting the class labels. In contrast to our earlier implementation, base classifiers in the ensembles are chosen based on maximal sensitivity and minimal redundancy by choosing only those with low average cosine distance. The resulting ensemble sets are subsequently modeled as undirected graphs. Performance of four different classification algorithms is shown to be better within the proposed ensemble framework in contrast to using them as traditional single classifier systems. Significance of a subset of genes with high-degree centrality in the network abstractions across the poor-prognosis samples is also discussed. Copyright © 2017 Elsevier Inc. All rights reserved.
Simultaneous calibration of ensemble river flow predictions over an entire range of lead times
NASA Astrophysics Data System (ADS)
Hemri, S.; Fundel, F.; Zappa, M.
2013-10-01
Probabilistic estimates of future water levels and river discharge are usually simulated with hydrologic models using ensemble weather forecasts as main inputs. As hydrologic models are imperfect and the meteorological ensembles tend to be biased and underdispersed, the ensemble forecasts for river runoff typically are biased and underdispersed, too. Thus, in order to achieve both reliable and sharp predictions statistical postprocessing is required. In this work Bayesian model averaging (BMA) is applied to statistically postprocess ensemble runoff raw forecasts for a catchment in Switzerland, at lead times ranging from 1 to 240 h. The raw forecasts have been obtained using deterministic and ensemble forcing meteorological models with different forecast lead time ranges. First, BMA is applied based on mixtures of univariate normal distributions, subject to the assumption of independence between distinct lead times. Then, the independence assumption is relaxed in order to estimate multivariate runoff forecasts over the entire range of lead times simultaneously, based on a BMA version that uses multivariate normal distributions. Since river runoff is a highly skewed variable, Box-Cox transformations are applied in order to achieve approximate normality. Both univariate and multivariate BMA approaches are able to generate well calibrated probabilistic forecasts that are considerably sharper than climatological forecasts. Additionally, multivariate BMA provides a promising approach for incorporating temporal dependencies into the postprocessed forecasts. Its major advantage against univariate BMA is an increase in reliability when the forecast system is changing due to model availability.
NASA Astrophysics Data System (ADS)
Poppick, A. N.; McKinnon, K. A.; Dunn-Sigouin, E.; Deser, C.
2017-12-01
Initial condition climate model ensembles suggest that regional temperature trends can be highly variable on decadal timescales due to characteristics of internal climate variability. Accounting for trend uncertainty due to internal variability is therefore necessary to contextualize recent observed temperature changes. However, while the variability of trends in a climate model ensemble can be evaluated directly (as the spread across ensemble members), internal variability simulated by a climate model may be inconsistent with observations. Observation-based methods for assessing the role of internal variability on trend uncertainty are therefore required. Here, we use a statistical resampling approach to assess trend uncertainty due to internal variability in historical 50-year (1966-2015) winter near-surface air temperature trends over North America. We compare this estimate of trend uncertainty to simulated trend variability in the NCAR CESM1 Large Ensemble (LENS), finding that uncertainty in wintertime temperature trends over North America due to internal variability is largely overestimated by CESM1, on average by a factor of 32%. Our observation-based resampling approach is combined with the forced signal from LENS to produce an 'Observational Large Ensemble' (OLENS). The members of OLENS indicate a range of spatially coherent fields of temperature trends resulting from different sequences of internal variability consistent with observations. The smaller trend variability in OLENS suggests that uncertainty in the historical climate change signal in observations due to internal variability is less than suggested by LENS.
An Intelligent Ensemble Neural Network Model for Wind Speed Prediction in Renewable Energy Systems
Ranganayaki, V.; Deepa, S. N.
2016-01-01
Various criteria are proposed to select the number of hidden neurons in artificial neural network (ANN) models and based on the criterion evolved an intelligent ensemble neural network model is proposed to predict wind speed in renewable energy applications. The intelligent ensemble neural model based wind speed forecasting is designed by averaging the forecasted values from multiple neural network models which includes multilayer perceptron (MLP), multilayer adaptive linear neuron (Madaline), back propagation neural network (BPN), and probabilistic neural network (PNN) so as to obtain better accuracy in wind speed prediction with minimum error. The random selection of hidden neurons numbers in artificial neural network results in overfitting or underfitting problem. This paper aims to avoid the occurrence of overfitting and underfitting problems. The selection of number of hidden neurons is done in this paper employing 102 criteria; these evolved criteria are verified by the computed various error values. The proposed criteria for fixing hidden neurons are validated employing the convergence theorem. The proposed intelligent ensemble neural model is applied for wind speed prediction application considering the real time wind data collected from the nearby locations. The obtained simulation results substantiate that the proposed ensemble model reduces the error value to minimum and enhances the accuracy. The computed results prove the effectiveness of the proposed ensemble neural network (ENN) model with respect to the considered error factors in comparison with that of the earlier models available in the literature. PMID:27034973
Torso undergarments: their merit for clothed and armored individuals in hot-dry conditions.
Van den Heuvel, Anne M J; Kerry, Pete; Van der Velde, Jeroen H P M; Patterson, Mark J; Taylor, Nigel A S
2010-12-01
The aim of this study was to evaluate how the textile composition of torso undergarment fabrics may impact upon thermal strain, moisture transfer, and the thermal and clothing comfort of fully clothed, armored individuals working in a hot-dry environment (41.2 degrees C and 29.8% relative humidity). Five undergarment configurations were assessed using eight men who walked for 120 min (4 km x h(-1)), then alternated running (2 min at 10 km x h(-1)) and walking (2 min at 4 km x h(-1)) for 20 min. Trials differed only in the torso undergarments worn: no t-shirt (Ensemble A); 100% cotton t-shirt (Ensemble B); 100% woolen t-shirt (Ensemble C); synthetic t-shirt (Ensemble D: nylon, polyethylene, elastane); hybrid shirt (Ensemble E). Thermal and cardiovascular strain progressively increased throughout each trial, with the average terminal core temperature being 38.5 degrees C and heart rate peaking at 170 bpm across all trials. However, no significant between-trial separations were evident for core or mean skin temperatures, or for heart rate, sweat production, evaporation, the within-ensemble water vapor pressures, or for thermal or clothing discomfort. Thus, under these conditions, neither the t-shirt textile compositions, nor the presence or absence of an undergarment, offered any significant thermal, central cardiac, or comfort advantages. Furthermore, there was no evidence that any of these fabrics created a significantly drier microclimate next to the skin.
NASA Technical Reports Server (NTRS)
Lau, K.-M.; Mehta, V. M.; Sud, Y. C.; Walker, G. K.
1994-01-01
Time average climatology and low-frequency variabilities of the global hydrologic cycle (GHC) in the Goddard Laboratory for Atmospheres (GLA) general circulation model (GCM) were investigated in the present work. A 730-day experiment was conducted with the GLA GCM forced by insolation, sea surface temperature, and ice-snow undergoing climatological annual cycles. Ifluences of interactive soil moisture on time average climatology and natural variability of the GHC were also investigated by conducting 365-day experiments with and without interactive soil moisture. Insolation, sea surface temperature, and ice-snow were fixed at their July levels in the latter two experiments. Results show that the model's time average hydrologic cycle variables for July in all three experiments agree reasonably well with observations. Except in the case of precipitable water, the zonal average climates of the annual cycle experiment and the two perpetual July experiments are alike, i.e., their differences are within limits of the natural variability of the model's climate. Statistics of various components of the GHC, i.e., water vapor, evaporation, and precipitation, are significantly affected by the presence of interactive soil moisture. A long-term trend is found in the principal empirical modes of variability of ground wetness, evaporation, and sensible heat. Dominant modes of variability of these quantities over land are physically consistent with one another and with land surface energy balance requirements. The dominant mode of precipitation variability is found to be closely related to organized convection over the tropical western Pacific Ocean. The precipitation variability has timescales in the range of 2 to 3 months and can be identified with the stationary component of the Madden-Julian Oscillation. The precipitation mode is not sensitive to the presence of interactive soil moisture but is closely linked to both the rotational and divergent components of atmospheric moisture transport. The present results indicate that globally coherent natural variability of the GHC in the GLA GCM has two basic timescales in the absence of annual cycles of external forcings: a long-term trend associated with atmosphere-soil moisture interaction which affects the model atmosphere mostly over midlatitude continental regions and a large-scale 2- to 3-month variability associated with atmospheric moist processes over the western Pacific Ocean.
Interactive vs. Non-Interactive Multi-Model Ensembles
NASA Astrophysics Data System (ADS)
Duane, G. S.
2013-12-01
If the members of an ensemble of different models are allowed to interact with one another in run time, predictive skill can be improved as compared to that of any individual model or any average of indvidual model outputs. Inter-model connections in such an interactive ensemble can be trained, using historical data, so that the resulting ``supermodel' synchronizes with reality when used in weather-prediction mode, where the individual models perform data assimilation from each other (with trainable inter-model 'observation error') as well as from real observations. In climate-projection mode, parameters of the individual models are changed, as might occur from an increase in GHG levels, and one obtains relevant statistical properties of the new supermodel attractor. In simple cases, it has been shown that training of the inter-model connections with the old parameter values gives a supermodel that is still predictive when the parameter values are changed. Here we inquire as to the circumstances under which supermodel performance can be expected to exceed that of the customary weighted average of model outputs. We consider a supermodel formed from quasigeostrophic (QG) channel models with different forcing coefficients, and introduce an effective training scheme for the inter-model connections. We show that the blocked-zonal index cycle is reproduced better by the supermodel than by any non-interactive ensemble in the extreme case where the forcing coefficients of the different models are very large or very small. With realistic differences in forcing coefficients, as would be representative of actual differences among IPCC-class models, the usual linearity assumption is justified and a weighted average of model outputs is adequate. It is therefore hypothesized that supermodeling is likely to be useful in situations where there are qualitative model differences, as arising from sub-gridscale parameterizations, that affect overall model behavior. Otherwise the usual ex post facto averaging will probably suffice. The advantage of supermodeling is seen in statistics such as anticorrelation between blocking activity in the Atlantic and Pacific sectors, in the case of the QG channel model, rather than in overall blocking frequency. Likewise in climate models, the advantage of supermodeling is typically manifest in higher-order statistics rather than in quantities such as mean temperature.
Control conditions for footwear insole and orthotic research.
Lewinson, Ryan T; Worobets, Jay T; Stefanyshyn, Darren J
2016-07-01
Footwear insoles/orthotics alter variables associated with musculoskeletal injury; however, their clinical effectiveness is inconclusive. One explanation for this is the possibility that control conditions may actually produce biomechanical changes that induce clinical responses. The purpose of this study was to compare insole/orthotic control conditions to identify if variables at the ground, ankle and knee that are associated with injury are altered relative to what participants would normally experience in their own shoes. Gait analysis was performed on 15 participants during walking and running while wearing (1) their own shoes, (2) #1 with a 3mm flat insole, (3) a standardized shoe, and (4) #3 with a 3mm flat insole, where external knee adduction moments, external knee adduction angular impulses, internal ankle inversion moments, and vertical ground reaction force loading rates were determined. Conditions 2-4 were expressed as percent changes relative to condition 1, and tests of proportions assessed if there were a significant number of individuals experiencing a biomechanically relevant change for each variable. Repeated-measures ANOVAs were used to identify group differences between conditions. The majority of movement-footwear-variable combinations contained a proportion of individuals experiencing biomechanically relevant changes compared to condition 1 that was significantly greater than the expected proportion of 20%. No systematic differences were found between conditions. This suggests that conditions 2-4 may alter biomechanics relative to baseline for many participants, but not in a consistent way across participants. It is recommended that participant's own footwear be used as control conditions in future trials where biomechanics are primary variables of interest. Copyright © 2016 Elsevier B.V. All rights reserved.
Goga, Haruhisa
2012-09-01
It is crucial to identify the owner of unattended footwear left at a crime scene. However, retrieving enough DNA for DNA profiling from the owner's foot skin (plantar skin) cells from inside the footwear is often unsuccessful. This is sometimes because footwear that is used on a daily basis contains an abundance of bacteria that degrade DNA. Further, numerous other factors related to the inside of the shoe, such as high humidity and temperature, can encourage bacterial growth inside the footwear and enhance DNA degradation. This project sought to determine if bacteria from inside footwear could be used for footwear trace evidence. The plantar skins and insoles of shoes of volunteers were swabbed for bacteria, and their bacterial community profiles were compared using bacterial 16S rRNA terminal restriction fragment length polymorphism analysis. Sufficient bacteria were recovered from both footwear insoles and the plantar skins of the volunteers. The profiling identified that each volunteer's plantar skins harbored unique bacterial communities, as did the individuals' footwear insoles. In most cases, a significant similarity in the bacterial community was identified for the matched foot/insole swabs from each volunteer, as compared with those profiles from different volunteers. These observations indicate the probability to discriminate the owner of footwear by comparing the microbial DNA fingerprint from inside footwear with that of the skin from the soles of the feet of the suspected owner. This novel strategy will offer auxiliary forensic footwear evidence for human DNA identification, although further investigations into this technique are required.
Surface meteorology and Solar Energy
NASA Technical Reports Server (NTRS)
Stackhouse, Paul W. (Principal Investigator)
The Release 5.1 Surface meteorology and Solar Energy (SSE) data contains parameters formulated for assessing and designing renewable energy systems. Parameters fall under 11 categories including: Solar cooking, solar thermal applications, solar geometry, tilted solar panels, energy storage systems, surplus product storage systems, cloud information, temperature, wind, other meteorological factors, and supporting information. This latest release contains new parameters based on recommendations by the renewable energy industry and it is more accurate than previous releases. On-line plotting capabilities allow quick evaluation of potential renewable energy projects for any region of the world. The SSE data set is formulated from NASA satellite- and reanalysis-derived insolation and meteorological data for the 10-year period July 1983 through June 1993. Results are provided for 1 degree latitude by 1 degree longitude grid cells over the globe. Average daily and monthly measurements for 1195 World Radiation Data Centre ground sites are also available. [Mission Objectives] The SSE project contains insolation and meteorology data intended to aid in the development of renewable energy systems. Collaboration between SSE and technology industries such as the Hybrid Optimization Model for Electric Renewables ( HOMER ) may aid in designing electric power systems that employ some combination of wind turbines, photovoltaic panels, or diesel generators to produce electricity. [Temporal_Coverage: Start_Date=1983-07-01; Stop_Date=1993-06-30] [Spatial_Coverage: Southernmost_Latitude=-90; Northernmost_Latitude=90; Westernmost_Longitude=-180; Easternmost_Longitude=180].
The Astronomical Forcing of Climate Change: Forcings and Feedbacks
NASA Astrophysics Data System (ADS)
Erb, M. P.; Broccoli, A. J.; Clement, A. C.
2010-12-01
Understanding the role that orbital forcing played in driving climate change over the Pleistocene has been a matter of ongoing research. While it is undeniable that variations in Earth’s orbit result in changes in the seasonal and latitudinal distribution of insolation, the specifics of how this forcing leads to the climate changes seen in the paleo record are not fully understood. To research this further, climate simulations have been conducted with the GFDL CM2.1, a coupled atmosphere-ocean GCM. Two simulations represent the extremes of obliquity during the past 600 kyr and four others show key times in the precessional cycle. All non-orbital variables are set to preindustrial levels to isolate the effects of astronomical forcing alone. It is expected that feedbacks should play a large role in dictating climate change, so to investigate this, the so-called “kernel method” is used to calculate the lapse rate, water vapor, albedo, and cloud feedbacks. Preliminary results of these experiments confirm that feedbacks are important in explaining the nature and, in places, even the sign of climate response to orbital forcing. In the case of low obliquity, for instance, a combination of climate feedbacks lead to global cooling in spite of zero global-average top of atmosphere insolation change. Feedbacks will be analyzed in the obliquity and precession experiments so that the role of feedbacks in contributing to climate change may be better understood.
A Kolmogorov-Smirnov test for the molecular clock based on Bayesian ensembles of phylogenies
Antoneli, Fernando; Passos, Fernando M.; Lopes, Luciano R.
2018-01-01
Divergence date estimates are central to understand evolutionary processes and depend, in the case of molecular phylogenies, on tests of molecular clocks. Here we propose two non-parametric tests of strict and relaxed molecular clocks built upon a framework that uses the empirical cumulative distribution (ECD) of branch lengths obtained from an ensemble of Bayesian trees and well known non-parametric (one-sample and two-sample) Kolmogorov-Smirnov (KS) goodness-of-fit test. In the strict clock case, the method consists in using the one-sample Kolmogorov-Smirnov (KS) test to directly test if the phylogeny is clock-like, in other words, if it follows a Poisson law. The ECD is computed from the discretized branch lengths and the parameter λ of the expected Poisson distribution is calculated as the average branch length over the ensemble of trees. To compensate for the auto-correlation in the ensemble of trees and pseudo-replication we take advantage of thinning and effective sample size, two features provided by Bayesian inference MCMC samplers. Finally, it is observed that tree topologies with very long or very short branches lead to Poisson mixtures and in this case we propose the use of the two-sample KS test with samples from two continuous branch length distributions, one obtained from an ensemble of clock-constrained trees and the other from an ensemble of unconstrained trees. Moreover, in this second form the test can also be applied to test for relaxed clock models. The use of a statistically equivalent ensemble of phylogenies to obtain the branch lengths ECD, instead of one consensus tree, yields considerable reduction of the effects of small sample size and provides a gain of power. PMID:29300759
Improving precision of glomerular filtration rate estimating model by ensemble learning.
Liu, Xun; Li, Ningshan; Lv, Linsheng; Fu, Yongmei; Cheng, Cailian; Wang, Caixia; Ye, Yuqiu; Li, Shaomin; Lou, Tanqi
2017-11-09
Accurate assessment of kidney function is clinically important, but estimates of glomerular filtration rate (GFR) by regression are imprecise. We hypothesized that ensemble learning could improve precision. A total of 1419 participants were enrolled, with 1002 in the development dataset and 417 in the external validation dataset. GFR was independently estimated from age, sex and serum creatinine using an artificial neural network (ANN), support vector machine (SVM), regression, and ensemble learning. GFR was measured by 99mTc-DTPA renal dynamic imaging calibrated with dual plasma sample 99mTc-DTPA GFR. Mean measured GFRs were 70.0 ml/min/1.73 m 2 in the developmental and 53.4 ml/min/1.73 m 2 in the external validation cohorts. In the external validation cohort, precision was better in the ensemble model of the ANN, SVM and regression equation (IQR = 13.5 ml/min/1.73 m 2 ) than in the new regression model (IQR = 14.0 ml/min/1.73 m 2 , P < 0.001). The precision of ensemble learning was the best of the three models, but the models had similar bias and accuracy. The median difference ranged from 2.3 to 3.7 ml/min/1.73 m 2 , 30% accuracy ranged from 73.1 to 76.0%, and P was > 0.05 for all comparisons of the new regression equation and the other new models. An ensemble learning model including three variables, the average ANN, SVM, and regression equation values, was more precise than the new regression model. A more complex ensemble learning strategy may further improve GFR estimates.
NASA Technical Reports Server (NTRS)
Latta, A. F.; Bowyer, J. M.; Fujita, T.; Richter, P. H.
1979-01-01
The performance and cost of the 10 MWe advanced solar thermal electric power plants sited in various regions of the continental United States were determined. The regional insolation data base is discussed. A range for the forecast cost of conventional electricity by region and nationally over the next several cades are presented.
Topographic and Other Influences on Pluto's Volatile Ices
NASA Astrophysics Data System (ADS)
Lewis, Briley Lynn; Stansberry, John; Grundy, William M.; Schmitt, Bernard; Protopapa, Silvia; Trafton, Laurence M.; Holler, Bryan J.; McKinnon, William B.; Schenk, Paul M.; Stern, S. Alan; Young, Leslie; Weaver, Harold A.; Olkin, Catherine; Ennico, Kimberly; New Horizons Science Team, The New Horizons Composition Team
2018-01-01
Pluto’s surface is known to consist of various volatile ices, mostly N2, CH4, and CO, which sublimate and condense on varying timescales, generally moving from points of high insolation to those of low insolation. The New Horizons Pluto encounter data provide multiple lenses through which to view Pluto’s detailed surface topography and composition and to investigate the distribution of volatiles on its surface, including albedo and elevation maps from the imaging instruments and composition maps from the LEISA spectral imager. The volatile surface ice is expected to be generally isothermal, due to the fact that their vapor pressures are in equilibrium with the atmosphere. Although secular topographic transport mechanisms suggest that points at low elevation should slowly fill with volatile ices (Trafton 2015 DPS abstract, Bertrand and Forget 2017), there are counter-examples of this across the surface, implying that energy discrepancies caused by insolation differences, albedo variations, local slopes, and other effects may take precedence at shorter timescales. Using data from the 2015 New Horizons flyby, we present our results of this investigation into the effects of variations in insolation, albedo, and topography on the presence of the different volatile ices across the surface of Pluto.
The response of East Asian monsoon to the precessional cycle
NASA Astrophysics Data System (ADS)
Lee, J. E.
2017-12-01
The oxygen isotopic composition of cave speleothems exhibits a large amplitude change following the insolation, particularly the precessional cycle. Whether speleothem d18O reflects local precipitation amount, however, has been questioned by alternative hypotheses: (1) d18O reflects upstream Indian monsoon precipitation, which influences the isotopic composition of the input vapor to East Asia, and (2) the isotopic composition of pre-monsoon and monsoon exhibits a large difference, and the seasonality of precipitation may have shifted in response to insolation. Motivated the fact that the magnitude of Asian monsoon d18O was not reproduced by most climate models, here I show new results, using the fully coupled GFDL model, that precipitation increases when the northern hemisphere receives more summer insolation, similar to the original claim. I argue that previous models do not produce enough rainfall during the monsoon season, possibly because the westerly jet is located too north in relation to the Tibetan Plateau during the monsoon season. I conclude that Asian monsoon intensity probably increases with increasing insolation there, given a large change in speleothem d18O. My next step will be testing this hypothesis after incorporating isotopes into the GFDL model.
Topographic and Other Influences on Pluto's Volatile Ices
NASA Astrophysics Data System (ADS)
Lewis, Briley Lynn; Stansberry, John; Grundy, William M.; Schmitt, Bernard; Protopapa, Silvia; Trafton, Laurence M.; Holler, Bryan J.; McKinnon, William B.; Schenk, Paul M.; Stern, S. Alan; Young, Leslie; Weaver, Harold A.; Olkin, Catherine; Ennico, Kimberly; New Horizons Science Team
2017-10-01
Pluto’s surface is known to consist of various volatile ices, mostly N2, CH4, and CO, which sublimate and condense on varying timescales, generally moving from points of high insolation to those of low insolation. The New Horizons Pluto encounter data provide multiple lenses through which to view Pluto’s detailed surface topography and composition and to investigate the distribution of volatiles on its surface, including albedo and elevation maps from the imaging instruments and composition maps from the LEISA spectral imager. The volatile surface ice is expected to be generally isothermal, due to the fact that their vapor pressures are in equilibrium with the atmosphere. Although secular topographic transport mechanisms suggest that points at low elevation should slowly fill with volatile ices (Trafton 2015 DPS abstract, Bertrand and Forget 2017), there are counter-examples of this across the surface, implying that energy discrepancies caused by insolation differences, albedo variations, local slopes, and other effects may take precedence at shorter timescales. Using data from the 2015 New Horizons flyby, we present our results of this investigation into the effects of variations in insolation, albedo, and topography on the presence of the different volatile ices across the surface of Pluto.
Domain wall network as QCD vacuum: confinement, chiral symmetry, hadronization
NASA Astrophysics Data System (ADS)
Nedelko, Sergei N.; Voronin, Vladimir V.
2017-03-01
An approach to QCD vacuum as a medium describable in terms of statistical ensemble of almost everywhere homogeneous Abelian (anti-)self-dual gluon fields is reviewed. These fields play the role of the confining medium for color charged fields as well as underline the mechanism of realization of chiral SUL(Nf) × SUR(Nf) and UA(1) symmetries. Hadronization formalism based on this ensemble leads to manifestly defined quantum effective meson action. Strong, electromagnetic and weak interactions of mesons are represented in the action in terms of nonlocal n-point interaction vertices given by the quark-gluon loops averaged over the background ensemble. Systematic results for the mass spectrum and decay constants of radially excited light, heavy-light mesons and heavy quarkonia are presented. Relationship of this approach to the results of functional renormalization group and Dyson-Schwinger equations, and the picture of harmonic confinement is briefly outlined.
Large-scale recording of neuronal ensembles.
Buzsáki, György
2004-05-01
How does the brain orchestrate perceptions, thoughts and actions from the spiking activity of its neurons? Early single-neuron recording research treated spike pattern variability as noise that needed to be averaged out to reveal the brain's representation of invariant input. Another view is that variability of spikes is centrally coordinated and that this brain-generated ensemble pattern in cortical structures is itself a potential source of cognition. Large-scale recordings from neuronal ensembles now offer the opportunity to test these competing theoretical frameworks. Currently, wire and micro-machined silicon electrode arrays can record from large numbers of neurons and monitor local neural circuits at work. Achieving the full potential of massively parallel neuronal recordings, however, will require further development of the neuron-electrode interface, automated and efficient spike-sorting algorithms for effective isolation and identification of single neurons, and new mathematical insights for the analysis of network properties.
Effects of a Rotating Aerodynamic Probe on the Flow Field of a Compressor Rotor
NASA Technical Reports Server (NTRS)
Lepicovsky, Jan
2008-01-01
An investigation of distortions of the rotor exit flow field caused by an aerodynamic probe mounted in the rotor is described in this paper. A rotor total pressure Kiel probe, mounted on the rotor hub and extending up to the mid-span radius of a rotor blade channel, generates a wake that forms additional flow blockage. Three types of high-response aerodynamic probes were used to investigate the distorted flow field behind the rotor. These probes were: a split-fiber thermo-anemometric probe to measure velocity and flow direction, a total pressure probe, and a disk probe for in-flow static pressure measurement. The signals acquired from these high-response probes were reduced using an ensemble averaging method based on a once per rotor revolution signal. The rotor ensemble averages were combined to construct contour plots for each rotor channel of the rotor tested. In order to quantify the rotor probe effects, the contour plots for each individual rotor blade passage were averaged into a single value. The distribution of these average values along the rotor circumference is a measure of changes in the rotor exit flow field due to the presence of a probe in the rotor. These distributions were generated for axial flow velocity and for static pressure.
Fitting a function to time-dependent ensemble averaged data.
Fogelmark, Karl; Lomholt, Michael A; Irbäck, Anders; Ambjörnsson, Tobias
2018-05-03
Time-dependent ensemble averages, i.e., trajectory-based averages of some observable, are of importance in many fields of science. A crucial objective when interpreting such data is to fit these averages (for instance, squared displacements) with a function and extract parameters (such as diffusion constants). A commonly overlooked challenge in such function fitting procedures is that fluctuations around mean values, by construction, exhibit temporal correlations. We show that the only available general purpose function fitting methods, correlated chi-square method and the weighted least squares method (which neglects correlation), fail at either robust parameter estimation or accurate error estimation. We remedy this by deriving a new closed-form error estimation formula for weighted least square fitting. The new formula uses the full covariance matrix, i.e., rigorously includes temporal correlations, but is free of the robustness issues, inherent to the correlated chi-square method. We demonstrate its accuracy in four examples of importance in many fields: Brownian motion, damped harmonic oscillation, fractional Brownian motion and continuous time random walks. We also successfully apply our method, weighted least squares including correlation in error estimation (WLS-ICE), to particle tracking data. The WLS-ICE method is applicable to arbitrary fit functions, and we provide a publically available WLS-ICE software.
Zonally averaged thermal balance and stability models for nitrogen polar caps on Triton
NASA Technical Reports Server (NTRS)
Stansberry, John A.; Lunine, J. I.; Porco, C. C.; Mcewen, A. S.
1990-01-01
Voyager four-color imaging data of Triton are analyzed to calculate the bolometric hemispheric albedo as a function of latitude and longitude. Zonal averages of these data have been incorporated into a thermal balance model involving insolation, reradiation, and latent heat of sublimation of N2 ice for the surface. The current average bolometric albedo of Triton's polar caps is 0.8, implying an effective temperature of 34.2 K and a surface pressure of N2 of 1.6 microbar for unit emissivity. This pressure is an order of magnitude lower than the surface pressure of 18 microbar inferred from Voyager data (Broadfoot et al., 1989; Conrath et al., 1989), a discrepancy that can be reconciled if the emissivity of the N2 on Triton's surface is 0.66. The model predicts that Triton's surface north of 15 deg N latitude is experiencing deposition of N2 frosts, as are the bright portions of the south polar cap near the equator. This result explains why the south cap covers nearly the entire southern hemisphere of Triton.
Energy sources for triton's geyser-like plumes
Brown, R.H.; Kirk, R.L.; Johnson, T.V.; Soderblom, L.A.
1990-01-01
Four geyser-like plumes were discovered near Triton's south pole in areas now in permanent sunlight. Because Triton's southern hemisphere is nearing a maximum summer solstice, insolation as a driver or a trigger for Triton's geyser-like plumes is an attractive hypothesis. Trapping of solar radiation in a translucent, low-conductivity surface layer (in a solid-state greenhouse), which is subsequently released in the form of latent heat of sublimation, could provide the required energy. Both the classical solid-state greenhouse consisting of exponentially absorbed insolation in a gray, translucent layer of solid nitrogen, and the "super" greenhouse consisting of a relatively transparent solid-nitrogen layer over an opaque, absorbing layer are plausible candidates. Geothermal heat may also play a part if assisted by the added energy input of seasonal cycles of insolation.
NASA Technical Reports Server (NTRS)
Latta, A. F.; Bowyer, J. M.; Fujita, T.; Richter, P. H.
1980-01-01
The performance and cost of four 10 MWe advanced solar thermal electric power plants sited in various regions of the continental United States was studied. Each region has different insolation characteristics which result in varying collector field areas, plant performance, capital costs and energy costs. The regional variation in solar plant performance was assessed in relation to the expected rise in the future cost of residential and commercial electricity supplied by conventional utility power systems in the same regions. A discussion of the regional insolation data base is presented along with a description of the solar systems performance and costs. A range for the forecast cost of conventional electricity by region and nationally over the next several decades is given.
NASA Astrophysics Data System (ADS)
Umansky, Moti; Weihs, Daphne
2012-08-01
In many physical and biophysical studies, single-particle tracking is utilized to reveal interactions, diffusion coefficients, active modes of driving motion, dynamic local structure, micromechanics, and microrheology. The basic analysis applied to those data is to determine the time-dependent mean-square displacement (MSD) of particle trajectories and perform time- and ensemble-averaging of similar motions. The motion of particles typically exhibits time-dependent power-law scaling, and only trajectories with qualitatively and quantitatively comparable MSD should be ensembled. Ensemble averaging trajectories that arise from different mechanisms, e.g., actively driven and diffusive, is incorrect and can result inaccurate correlations between structure, mechanics, and activity. We have developed an algorithm to automatically and accurately determine power-law scaling of experimentally measured single-particle MSD. Trajectories can then categorized and grouped according to user defined cutoffs of time, amplitudes, scaling exponent values, or combinations. Power-law fits are then provided for each trajectory alongside categorized groups of trajectories, histograms of power laws, and the ensemble-averaged MSD of each group. The codes are designed to be easily incorporated into existing user codes. We expect that this algorithm and program will be invaluable to anyone performing single-particle tracking, be it in physical or biophysical systems. Catalogue identifier: AEMD_v1_0 Program summary URL:http://cpc.cs.qub.ac.uk/summaries/AEMD_v1_0.html Program obtainable from: CPC Program Library, Queen's University, Belfast, N. Ireland Licensing provisions: Standard CPC licence, http://cpc.cs.qub.ac.uk/licence/licence.html No. of lines in distributed program, including test data, etc.: 25 892 No. of bytes in distributed program, including test data, etc.: 5 572 780 Distribution format: tar.gz Programming language: MATLAB (MathWorks Inc.) version 7.11 (2010b) or higher, program should also be backwards compatible. Symbolic Math Toolboxes (5.5) is required. The Curve Fitting Toolbox (3.0) is recommended. Computer: Tested on Windows only, yet should work on any computer running MATLAB. In Windows 7, should be used as administrator, if the user is not the administrator the program may not be able to save outputs and temporary outputs to all locations. Operating system: Any supporting MATLAB (MathWorks Inc.) v7.11 / 2010b or higher. Supplementary material: Sample output files (approx. 30 MBytes) are available. Classification: 12 External routines: Several MATLAB subfunctions (m-files), freely available on the web, were used as part of and included in, this code: count, NaN suite, parseArgs, roundsd, subaxis, wcov, wmean, and the executable pdfTK.exe. Nature of problem: In many physical and biophysical areas employing single-particle tracking, having the time-dependent power-laws governing the time-averaged meansquare displacement (MSD) of a single particle is crucial. Those power laws determine the mode-of-motion and hint at the underlying mechanisms driving motion. Accurate determination of the power laws that describe each trajectory will allow categorization into groups for further analysis of single trajectories or ensemble analysis, e.g. ensemble and time-averaged MSD. Solution method: The algorithm in the provided program automatically analyzes and fits time-dependent power laws to single particle trajectories, then group particles according to user defined cutoffs. It accepts time-dependent trajectories of several particles, each trajectory is run through the program, its time-averaged MSD is calculated, and power laws are determined in regions where the MSD is linear on a log-log scale. Our algorithm searches for high-curvature points in experimental data, here time-dependent MSD. Those serve as anchor points for determining the ranges of the power-law fits. Power-law scaling is then accurately determined and error estimations of the parameters and quality of fit are provided. After all single trajectory time-averaged MSDs are fit, we obtain cutoffs from the user to categorize and segment the power laws into groups; cutoff are either in exponents of the power laws, time of appearance of the fits, or both together. The trajectories are sorted according to the cutoffs and the time- and ensemble-averaged MSD of each group is provided, with histograms of the distributions of the exponents in each group. The program then allows the user to generate new trajectory files with trajectories segmented according to the determined groups, for any further required analysis. Additional comments: README file giving the names and a brief description of all the files that make-up the package and clear instructions on the installation and execution of the program is included in the distribution package. Running time: On an i5 Windows 7 machine with 4 GB RAM the automated parts of the run (excluding data loading and user input) take less than 45 minutes to analyze and save all stages for an 844 trajectory file, including optional PDF save. Trajectory length did not affect run time (tested up to 3600 frames/trajectory), which was on average 3.2±0.4 seconds per trajectory.
NASA Astrophysics Data System (ADS)
Tamkin, G.; Schnase, J. L.; Duffy, D.; Li, J.; Strong, S.; Thompson, J. H.
2016-12-01
We are extending climate analytics-as-a-service, including: (1) A high-performance Virtual Real-Time Analytics Testbed supporting six major reanalysis data sets using advanced technologies like the Cloudera Impala-based SQL and Hadoop-based MapReduce analytics over native NetCDF files. (2) A Reanalysis Ensemble Service (RES) that offers a basic set of commonly used operations over the reanalysis collections that are accessible through NASA's climate data analytics Web services and our client-side Climate Data Services Python library, CDSlib. (3) An Open Geospatial Consortium (OGC) WPS-compliant Web service interface to CDSLib to accommodate ESGF's Web service endpoints. This presentation will report on the overall progress of this effort, with special attention to recent enhancements that have been made to the Reanalysis Ensemble Service, including the following: - An CDSlib Python library that supports full temporal, spatial, and grid-based resolution services - A new reanalysis collections reference model to enable operator design and implementation - An enhanced library of sample queries to demonstrate and develop use case scenarios - Extended operators that enable single- and multiple reanalysis area average, vertical average, re-gridding, and trend, climatology, and anomaly computations - Full support for the MERRA-2 reanalysis and the initial integration of two additional reanalyses - A prototype Jupyter notebook-based distribution mechanism that combines CDSlib documentation with interactive use case scenarios and personalized project management - Prototyped uncertainty quantification services that combine ensemble products with comparative observational products - Convenient, one-stop shopping for commonly used data products from multiple reanalyses, including basic subsetting and arithmetic operations over the data and extractions of trends, climatologies, and anomalies - The ability to compute and visualize multiple reanalysis intercomparisons
NASA Astrophysics Data System (ADS)
Jiang, Xue; Lu, Wenxi; Hou, Zeyu; Zhao, Haiqing; Na, Jin
2015-11-01
The purpose of this study was to identify an optimal surfactant-enhanced aquifer remediation (SEAR) strategy for aquifers contaminated by dense non-aqueous phase liquid (DNAPL) based on an ensemble of surrogates-based optimization technique. A saturated heterogeneous medium contaminated by nitrobenzene was selected as case study. A new kind of surrogate-based SEAR optimization employing an ensemble surrogate (ES) model together with a genetic algorithm (GA) is presented. Four methods, namely radial basis function artificial neural network (RBFANN), kriging (KRG), support vector regression (SVR), and kernel extreme learning machines (KELM), were used to create four individual surrogate models, which were then compared. The comparison enabled us to select the two most accurate models (KELM and KRG) to establish an ES model of the SEAR simulation model, and the developed ES model as well as these four stand-alone surrogate models was compared. The results showed that the average relative error of the average nitrobenzene removal rates between the ES model and the simulation model for 20 test samples was 0.8%, which is a high approximation accuracy, and which indicates that the ES model provides more accurate predictions than the stand-alone surrogate models. Then, a nonlinear optimization model was formulated for the minimum cost, and the developed ES model was embedded into this optimization model as a constrained condition. Besides, GA was used to solve the optimization model to provide the optimal SEAR strategy. The developed ensemble surrogate-optimization approach was effective in seeking a cost-effective SEAR strategy for heterogeneous DNAPL-contaminated sites. This research is expected to enrich and develop the theoretical and technical implications for the analysis of remediation strategy optimization of DNAPL-contaminated aquifers.
NASA Astrophysics Data System (ADS)
Lu, W., Sr.; Xin, X.; Luo, J.; Jiang, X.; Zhang, Y.; Zhao, Y.; Chen, M.; Hou, Z.; Ouyang, Q.
2015-12-01
The purpose of this study was to identify an optimal surfactant-enhanced aquifer remediation (SEAR) strategy for aquifers contaminated by dense non-aqueous phase liquid (DNAPL) based on an ensemble of surrogates-based optimization technique. A saturated heterogeneous medium contaminated by nitrobenzene was selected as case study. A new kind of surrogate-based SEAR optimization employing an ensemble surrogate (ES) model together with a genetic algorithm (GA) is presented. Four methods, namely radial basis function artificial neural network (RBFANN), kriging (KRG), support vector regression (SVR), and kernel extreme learning machines (KELM), were used to create four individual surrogate models, which were then compared. The comparison enabled us to select the two most accurate models (KELM and KRG) to establish an ES model of the SEAR simulation model, and the developed ES model as well as these four stand-alone surrogate models was compared. The results showed that the average relative error of the average nitrobenzene removal rates between the ES model and the simulation model for 20 test samples was 0.8%, which is a high approximation accuracy, and which indicates that the ES model provides more accurate predictions than the stand-alone surrogate models. Then, a nonlinear optimization model was formulated for the minimum cost, and the developed ES model was embedded into this optimization model as a constrained condition. Besides, GA was used to solve the optimization model to provide the optimal SEAR strategy. The developed ensemble surrogate-optimization approach was effective in seeking a cost-effective SEAR strategy for heterogeneous DNAPL-contaminated sites. This research is expected to enrich and develop the theoretical and technical implications for the analysis of remediation strategy optimization of DNAPL-contaminated aquifers.
DYNAMIC STABILITY OF THE SOLAR SYSTEM: STATISTICALLY INCONCLUSIVE RESULTS FROM ENSEMBLE INTEGRATIONS
DOE Office of Scientific and Technical Information (OSTI.GOV)
Zeebe, Richard E., E-mail: zeebe@soest.hawaii.edu
Due to the chaotic nature of the solar system, the question of its long-term stability can only be answered in a statistical sense, for instance, based on numerical ensemble integrations of nearby orbits. Destabilization of the inner planets, leading to close encounters and/or collisions can be initiated through a large increase in Mercury's eccentricity, with a currently assumed likelihood of ∼1%. However, little is known at present about the robustness of this number. Here I report ensemble integrations of the full equations of motion of the eight planets and Pluto over 5 Gyr, including contributions from general relativity. The resultsmore » show that different numerical algorithms lead to statistically different results for the evolution of Mercury's eccentricity (e{sub M}). For instance, starting at present initial conditions (e{sub M}≃0.21), Mercury's maximum eccentricity achieved over 5 Gyr is, on average, significantly higher in symplectic ensemble integrations using heliocentric rather than Jacobi coordinates and stricter error control. In contrast, starting at a possible future configuration (e{sub M}≃0.53), Mercury's maximum eccentricity achieved over the subsequent 500 Myr is, on average, significantly lower using heliocentric rather than Jacobi coordinates. For example, the probability for e{sub M} to increase beyond 0.53 over 500 Myr is >90% (Jacobi) versus only 40%-55% (heliocentric). This poses a dilemma because the physical evolution of the real system—and its probabilistic behavior—cannot depend on the coordinate system or the numerical algorithm chosen to describe it. Some tests of the numerical algorithms suggest that symplectic integrators using heliocentric coordinates underestimate the odds for destabilization of Mercury's orbit at high initial e{sub M}.« less
NASA Astrophysics Data System (ADS)
Ma, Yingzhao; Yang, Yuan; Han, Zhongying; Tang, Guoqiang; Maguire, Lane; Chu, Zhigang; Hong, Yang
2018-01-01
The objective of this study is to comprehensively evaluate the new Ensemble Multi-Satellite Precipitation Dataset using the Dynamic Bayesian Model Averaging scheme (EMSPD-DBMA) at daily and 0.25° scales from 2001 to 2015 over the Tibetan Plateau (TP). Error analysis against gauge observations revealed that EMSPD-DBMA captured the spatiotemporal pattern of daily precipitation with an acceptable Correlation Coefficient (CC) of 0.53 and a Relative Bias (RB) of -8.28%. Moreover, EMSPD-DBMA outperformed IMERG and GSMaP-MVK in almost all metrics in the summers of 2014 and 2015, with the lowest RB and Root Mean Square Error (RMSE) values of -2.88% and 8.01 mm/d, respectively. It also better reproduced the Probability Density Function (PDF) in terms of daily rainfall amount and estimated moderate and heavy rainfall better than both IMERG and GSMaP-MVK. Further, hydrological evaluation with the Coupled Routing and Excess STorage (CREST) model in the Upper Yangtze River region indicated that the EMSPD-DBMA forced simulation showed satisfying hydrological performance in terms of streamflow prediction, with Nash-Sutcliffe coefficient of Efficiency (NSE) values of 0.82 and 0.58, compared to gauge forced simulation (0.88 and 0.60) at the calibration and validation periods, respectively. EMSPD-DBMA also performed a greater fitness for peak flow simulation than a new Multi-Source Weighted-Ensemble Precipitation Version 2 (MSWEP V2) product, indicating a promising prospect of hydrological utility for the ensemble satellite precipitation data. This study belongs to early comprehensive evaluation of the blended multi-satellite precipitation data across the TP, which would be significant for improving the DBMA algorithm in regions with complex terrain.
Can decadal climate predictions be improved by ocean ensemble dispersion filtering?
NASA Astrophysics Data System (ADS)
Kadow, C.; Illing, S.; Kröner, I.; Ulbrich, U.; Cubasch, U.
2017-12-01
Decadal predictions by Earth system models aim to capture the state and phase of the climate several years inadvance. Atmosphere-ocean interaction plays an important role for such climate forecasts. While short-termweather forecasts represent an initial value problem and long-term climate projections represent a boundarycondition problem, the decadal climate prediction falls in-between these two time scales. The ocean memorydue to its heat capacity holds big potential skill on the decadal scale. In recent years, more precise initializationtechniques of coupled Earth system models (incl. atmosphere and ocean) have improved decadal predictions.Ensembles are another important aspect. Applying slightly perturbed predictions results in an ensemble. Insteadof using and evaluating one prediction, but the whole ensemble or its ensemble average, improves a predictionsystem. However, climate models in general start losing the initialized signal and its predictive skill from oneforecast year to the next. Here we show that the climate prediction skill of an Earth system model can be improvedby a shift of the ocean state toward the ensemble mean of its individual members at seasonal intervals. Wefound that this procedure, called ensemble dispersion filter, results in more accurate results than the standarddecadal prediction. Global mean and regional temperature, precipitation, and winter cyclone predictions showan increased skill up to 5 years ahead. Furthermore, the novel technique outperforms predictions with largerensembles and higher resolution. Our results demonstrate how decadal climate predictions benefit from oceanensemble dispersion filtering toward the ensemble mean. This study is part of MiKlip (fona-miklip.de) - a major project on decadal climate prediction in Germany.We focus on the Max-Planck-Institute Earth System Model using the low-resolution version (MPI-ESM-LR) andMiKlip's basic initialization strategy as in 2017 published decadal climate forecast: http://www.fona-miklip.de/decadal-forecast-2017-2026/decadal-forecast-for-2017-2026/ More informations about this study in JAMES:DOI: 10.1002/2016MS000787
Ehrhardt, Fiona; Soussana, Jean-François; Bellocchi, Gianni; Grace, Peter; McAuliffe, Russel; Recous, Sylvie; Sándor, Renáta; Smith, Pete; Snow, Val; de Antoni Migliorati, Massimiliano; Basso, Bruno; Bhatia, Arti; Brilli, Lorenzo; Doltra, Jordi; Dorich, Christopher D; Doro, Luca; Fitton, Nuala; Giacomini, Sandro J; Grant, Brian; Harrison, Matthew T; Jones, Stephanie K; Kirschbaum, Miko U F; Klumpp, Katja; Laville, Patricia; Léonard, Joël; Liebig, Mark; Lieffering, Mark; Martin, Raphaël; Massad, Raia S; Meier, Elizabeth; Merbold, Lutz; Moore, Andrew D; Myrgiotis, Vasileios; Newton, Paul; Pattey, Elizabeth; Rolinski, Susanne; Sharp, Joanna; Smith, Ward N; Wu, Lianhai; Zhang, Qing
2018-02-01
Simulation models are extensively used to predict agricultural productivity and greenhouse gas emissions. However, the uncertainties of (reduced) model ensemble simulations have not been assessed systematically for variables affecting food security and climate change mitigation, within multi-species agricultural contexts. We report an international model comparison and benchmarking exercise, showing the potential of multi-model ensembles to predict productivity and nitrous oxide (N 2 O) emissions for wheat, maize, rice and temperate grasslands. Using a multi-stage modelling protocol, from blind simulations (stage 1) to partial (stages 2-4) and full calibration (stage 5), 24 process-based biogeochemical models were assessed individually or as an ensemble against long-term experimental data from four temperate grassland and five arable crop rotation sites spanning four continents. Comparisons were performed by reference to the experimental uncertainties of observed yields and N 2 O emissions. Results showed that across sites and crop/grassland types, 23%-40% of the uncalibrated individual models were within two standard deviations (SD) of observed yields, while 42 (rice) to 96% (grasslands) of the models were within 1 SD of observed N 2 O emissions. At stage 1, ensembles formed by the three lowest prediction model errors predicted both yields and N 2 O emissions within experimental uncertainties for 44% and 33% of the crop and grassland growth cycles, respectively. Partial model calibration (stages 2-4) markedly reduced prediction errors of the full model ensemble E-median for crop grain yields (from 36% at stage 1 down to 4% on average) and grassland productivity (from 44% to 27%) and to a lesser and more variable extent for N 2 O emissions. Yield-scaled N 2 O emissions (N 2 O emissions divided by crop yields) were ranked accurately by three-model ensembles across crop species and field sites. The potential of using process-based model ensembles to predict jointly productivity and N 2 O emissions at field scale is discussed. © 2017 John Wiley & Sons Ltd.
Assessment of Surface Air Temperature over China Using Multi-criterion Model Ensemble Framework
NASA Astrophysics Data System (ADS)
Li, J.; Zhu, Q.; Su, L.; He, X.; Zhang, X.
2017-12-01
The General Circulation Models (GCMs) are designed to simulate the present climate and project future trends. It has been noticed that the performances of GCMs are not always in agreement with each other over different regions. Model ensemble techniques have been developed to post-process the GCMs' outputs and improve their prediction reliabilities. To evaluate the performances of GCMs, root-mean-square error, correlation coefficient, and uncertainty are commonly used statistical measures. However, the simultaneous achievements of these satisfactory statistics cannot be guaranteed when using many model ensemble techniques. Meanwhile, uncertainties and future scenarios are critical for Water-Energy management and operation. In this study, a new multi-model ensemble framework was proposed. It uses a state-of-art evolutionary multi-objective optimization algorithm, termed Multi-Objective Complex Evolution Global Optimization with Principle Component Analysis and Crowding Distance (MOSPD), to derive optimal GCM ensembles and demonstrate the trade-offs among various solutions. Such trade-off information was further analyzed with a robust Pareto front with respect to different statistical measures. A case study was conducted to optimize the surface air temperature (SAT) ensemble solutions over seven geographical regions of China for the historical period (1900-2005) and future projection (2006-2100). The results showed that the ensemble solutions derived with MOSPD algorithm are superior over the simple model average and any single model output during the historical simulation period. For the future prediction, the proposed ensemble framework identified that the largest SAT change would occur in the South Central China under RCP 2.6 scenario, North Eastern China under RCP 4.5 scenario, and North Western China under RCP 8.5 scenario, while the smallest SAT change would occur in the Inner Mongolia under RCP 2.6 scenario, South Central China under RCP 4.5 scenario, and South Central China under RCP 8.5 scenario.
Solar energy system economic evaluation: Contemporary Newman, Georgia
NASA Technical Reports Server (NTRS)
1980-01-01
An economic evaluation of performance of the solar energy system (based on life cycle costs versus energy savings) for five cities considered to be representative of a broad range of environmental and economic conditions in the United States is discussed. The considered life cycle costs are: hardware, installation, maintenance, and operating costs for the solar unique components of the total system. The total system takes into consideration long term average environmental conditions, loads, fuel costs, and other economic factors applicable in each of five cities. Selection criteria are based on availability of long term weather data, heating degree days, cold water supply temperature, solar insolation, utility rates, market potential, and type of solar system.
Surface Meteorology and Solar Energy (SSE) Data Release 5.1
NASA Technical Reports Server (NTRS)
Stackhouse, Paul W. (Principal Investigator)
The Surface meteorology and Solar Energy (SSE) data set contains over 200 parameters formulated for assessing and designing renewable energy systems.The SSE data set is formulated from NASA satellite- and reanalysis-derived insolation and meteorological data for the 10-year period July 1983 through June 1993. Results are provided for 1 degree latitude by 1 degree longitude grid cells over the globe. Average daily and monthly measurements for 1195 World Radiation Data Centre ground sites are also available. [Location=GLOBAL] [Temporal_Coverage: Start_Date=1983-07-01; Stop_Date=1993-06-30] [Spatial_Coverage: Southernmost_Latitude=-90; Northernmost_Latitude=90; Westernmost_Longitude=-180; Easternmost_Longitude=180] [Data_Resolution: Latitude_Resolution=1 degree; Longitude_Resolution=1 degree].
Solar energy system economic evaluation: Contemporary Newman, Georgia
NASA Astrophysics Data System (ADS)
1980-09-01
An economic evaluation of performance of the solar energy system (based on life cycle costs versus energy savings) for five cities considered to be representative of a broad range of environmental and economic conditions in the United States is discussed. The considered life cycle costs are: hardware, installation, maintenance, and operating costs for the solar unique components of the total system. The total system takes into consideration long term average environmental conditions, loads, fuel costs, and other economic factors applicable in each of five cities. Selection criteria are based on availability of long term weather data, heating degree days, cold water supply temperature, solar insolation, utility rates, market potential, and type of solar system.
NASA Astrophysics Data System (ADS)
Wan, Naijung; Chung, Weiling; Li, Hong-Chun; Lin, Huilin; Ku, Teh-Lung; Shen, Chuan-Chou; Yuan, Daoxian; Zhang, Meiliang; Lin, Yushi
2011-04-01
Four 230Th-dated δ 18O records in three stalagmites: one from Dragon Spring (stalagmite L12) and two from Golden Lion Caves (stalagmites JSD-01 and JSD-02) located in Libo County, southeast Guizhou, China, are presented. These records cover age ranges of 0.75-2 ka (late Holocene), 9-9.6 ka (early Holocene), 87.9-88.2 ka and 93.8-95.2 ka (late Pleistocene). They fit well with the published Dongge Cave record from the same area, where the climate has been much influenced by the East Asian Monsoon. The agreement reinforces the role of stalagmite δ 18O as a proxy for regional precipitation or monsoon strength. On millennial or longer time scales, the δ 18O record of Dongge Cave resembles those of Sanbao Cave in Hubei and Hulu Cave in Jiangsu of China. The matching of these records with the northern hemisphere solar-insolation variations points to the importance of insolation in affecting the East Asian Summer Monsoon strength on 10 3-10 4-yr scales. While the monsoon variations as depicted by these Chinese speleothem δ 18O records show a strong coupling to insolation's precession component (23-kyr period), other climate records of global significance extracted from oceanic and terrestrial deposits (e.g., deep-sea sediments, polar ice cores, cave deposits from non-monsoonal regions) do not. Although the latter records were thought to be also influenced by the large changes in global ice volume, they show variations modulated chiefly by insolation due to earth's eccentricity change (100-kyr period). It is hypothesized that precession variations control the distribution of solar insolation between the northern and southern hemispheres, the ITCZ position and the modulation of low-latitude summer monsoon variability. Increasing rainfall and/or summer/winter precipitation ratio brought about by strong summer monsoons leads to δ 18O depletion in stalagmites grown in monsoonal regions. One should use caution to compare speleothem δ 18O records with other paleoclimate records reflecting Pleistocene ice ages on 10 4-10 5-yr timescales.
Improving consensus structure by eliminating averaging artifacts
KC, Dukka B
2009-01-01
Background Common structural biology methods (i.e., NMR and molecular dynamics) often produce ensembles of molecular structures. Consequently, averaging of 3D coordinates of molecular structures (proteins and RNA) is a frequent approach to obtain a consensus structure that is representative of the ensemble. However, when the structures are averaged, artifacts can result in unrealistic local geometries, including unphysical bond lengths and angles. Results Herein, we describe a method to derive representative structures while limiting the number of artifacts. Our approach is based on a Monte Carlo simulation technique that drives a starting structure (an extended or a 'close-by' structure) towards the 'averaged structure' using a harmonic pseudo energy function. To assess the performance of the algorithm, we applied our approach to Cα models of 1364 proteins generated by the TASSER structure prediction algorithm. The average RMSD of the refined model from the native structure for the set becomes worse by a mere 0.08 Å compared to the average RMSD of the averaged structures from the native structure (3.28 Å for refined structures and 3.36 A for the averaged structures). However, the percentage of atoms involved in clashes is greatly reduced (from 63% to 1%); in fact, the majority of the refined proteins had zero clashes. Moreover, a small number (38) of refined structures resulted in lower RMSD to the native protein versus the averaged structure. Finally, compared to PULCHRA [1], our approach produces representative structure of similar RMSD quality, but with much fewer clashes. Conclusion The benchmarking results demonstrate that our approach for removing averaging artifacts can be very beneficial for the structural biology community. Furthermore, the same approach can be applied to almost any problem where averaging of 3D coordinates is performed. Namely, structure averaging is also commonly performed in RNA secondary prediction [2], which could also benefit from our approach. PMID:19267905
Evaluating average and atypical response in radiation effects simulations
NASA Astrophysics Data System (ADS)
Weller, R. A.; Sternberg, A. L.; Massengill, L. W.; Schrimpf, R. D.; Fleetwood, D. M.
2003-12-01
We examine the limits of performing single-event simulations using pre-averaged radiation events. Geant4 simulations show the necessity, for future devices, to supplement current methods with ensemble averaging of device-level responses to physically realistic radiation events. Initial Monte Carlo simulations have generated a significant number of extremal events in local energy deposition. These simulations strongly suggest that proton strikes of sufficient energy, even those that initiate purely electronic interactions, can initiate device response capable in principle of producing single event upset or microdose damage in highly scaled devices.
Insolation-induced mid-Brunhes transition in Southern Ocean ventilation and deep-ocean temperature.
Yin, Qiuzhen
2013-02-14
Glacial-interglacial cycles characterized by long cold periods interrupted by short periods of warmth are the dominant feature of Pleistocene climate, with the relative intensity and duration of past and future interglacials being of particular interest for civilization. The interglacials after 430,000 years ago were characterized by warmer climates and higher atmospheric concentrations of carbon dioxide than the interglacials before, but the cause of this climatic transition (the so-called mid-Brunhes event (MBE)) is unknown. Here I show, on the basis of model simulations, that in response to insolation changes only, feedbacks between sea ice, temperature, evaporation and salinity caused vigorous pre-MBE Antarctic bottom water formation and Southern Ocean ventilation. My results also show that strong westerlies increased the pre-MBE overturning in the Southern Ocean via an increased latitudinal insolation gradient created by changes in eccentricity during austral winter and by changes in obliquity during austral summer. The stronger bottom water formation led to a cooler deep ocean during the older interglacials. These insolation-induced differences in the deep-sea temperature and in the Southern Ocean ventilation between the more recent interglacials and the older ones were not expected, because there is no straightforward systematic difference in the astronomical parameters between the interglacials before and after 430,000 years ago. Rather than being a real 'event', the apparent MBE seems to have resulted from a series of individual interglacial responses--including notable exceptions to the general pattern--to various combinations of insolation conditions. Consequently, assuming no anthropogenic interference, future interglacials may have pre- or post-MBE characteristics without there being a systematic change in forcings. These findings are a first step towards understanding the magnitude change of the interglacial carbon dioxide concentration around 430,000 years ago.
How and when to terminate the Pleistocene ice ages?
NASA Astrophysics Data System (ADS)
Abe-Ouchi, A.; Saito, F.; Kawamura, K.; Takahashi, K.; Raymo, M. E.; Okuno, J.; Blatter, H.
2015-12-01
Climate change with wax and wane of large Northern Hemisphere ice sheet occurred in the past 800 thousand years characterized by 100 thousand year cycle with a large amplitude of sawtooth pattern, following a transition from a period of 40 thousand years cycle with small amplitude of ice sheet change at about 1 million years ago. Although the importance of insolation as the ultimate driver is now appreciated, the mechanism what determines timing and strength of terminations are far from clearly understood. Here we show, using comprehensive climate and ice-sheet models, that insolation and internal feedbacks between the climate, the ice sheets and the lithosphere-asthenosphere system explain the 100,000-year periodicity. The responses of equilibrium states of ice sheets to summer insolation show hysteresis, with the shape and position of the hysteresis loop playing a key part in determining the periodicities of glacial cycles. The hysteresis loop of the North American ice sheet is such that after inception of the ice sheet, its mass balance remains mostly positive through several precession cycles, whose amplitudes decrease towards an eccentricity minimum. The larger the ice sheet grows and extends towards lower latitudes, the smaller is the insolation required to make the mass balance negative. Therefore, once a large ice sheet is established, a moderate increase in insolation is sufficient to trigger a negative mass balance, leading to an almost complete retreat of the ice sheet within several thousand years. We discuss further the mechanism which determine the timing of ice age terminations by examining the role of astronomical forcing and change of atmospheric carbon dioxide contents through sensitivity experiments and comparison of several ice age cycles with different settings of astronomical forcings.
Insights into changes in precipitation patterns in Brazil from oxygen isotope ratios on speleothems
NASA Astrophysics Data System (ADS)
Cruz, F.; Mathias, V.; Stephen, B. J.; Wang, X.; Cheng, H.; Werner, M.; Edwards, R. L.; Karmann, I.; Auler, A. S.
2008-12-01
Variations in tropical precipitation on millennial and orbital time scales can reflect a Hadley-cell-related anti- phasing between the Northern and Southern hemispheres due to the influence of insolation on the global summer monsoons. A new δ18O speleothem record from northeastern Brazil shows that insolation- driven changes in monsoon intensity are capable of producing a similar, zonally oriented anti-phasing within the same hemisphere. Comparison of our speleothem record with other precipitation-sensitive proxies from the central Andes and southeastern Brazil shows that precipitation in Northeastern Brazil has been out of phase with insolation and rainfall in the rest of tropical South America south of the equator since the Last Glacial Maximum. Northeastern Brazil experienced humid conditions when summer insolation was reduced and arid conditions when insolation was high. While previous interpretations of past climate change in NE South America have commonly invoked meridional displacements in ITCZ location as the main mechanism for changes in precipitation on millennial time scales, our results suggest that remote monsoon forcing is responsible for much of the observed precipitation changes on orbital time scales during the Holocene. These results demonstrate that orbitally driven out-of-phase relationships in precipitation are not limited to interhemispheric anti-phasing as demonstrated previously, but may well occur within the same hemisphere. Speleothem records also indicate contrasting climatic conditions around the Last Glacial Maximum in Brazil, characterized by marked dry and wet climates in the Nordeste and in southeastern Brazil, respectively. It is likely, however, that these regional differences primarily reflect more distant extratropical teleconnections from the Atlantic Ocean and high northern latitude changes during glacial conditions.
NASA Astrophysics Data System (ADS)
Voigt, A.
2013-11-01
I study the Hadley circulation of a completely ice-covered Snowball Earth through simulations with a comprehensive atmosphere general circulation model. Because the Snowball Earth atmosphere is an example of a dry atmosphere, these simulations allow me to test to what extent dry theories and idealized models capture the dynamics of realistic dry Hadley circulations. Perpetual off-equatorial as well as seasonally varying insolation is used, extending a previous study for perpetual on-equatorial (equinox) insolation. Vertical diffusion of momentum, representing the momentum transport of dry convection, is fundamental to the momentum budgets of both the winter and summer cells. In the zonal budget, it is the primary process balancing the Coriolis force. In the meridional budget, it mixes meridional momentum between the upper and the lower branch and thereby decelerates the circulation. Because of the latter, the circulation intensifies by a factor of three when vertical diffusion of momentum is suppressed. For seasonally varying insolation, the circulation undergoes rapid transitions from the weak summer into the strong winter regime. Consistent with previous studies in idealized models, these transitions result from a mean-flow feedback, because of which they are insensitive to the treatment of vertical diffusion of momentum. Overall, the results corroborate previous findings for perpetual on-equatorial insolation. They demonstrate that descriptions of realistic dry Hadley circulations, in particular their strength, need to incorporate the vertical momentum transport by dry convection, a process that is neglected in most dry theories and idealized models. An improved estimate of the strength of the Snowball Earth Hadley circulation will also help to better constrain the climate of a possible Neoproterozoic Snowball Earth and its deglaciation threshold.
NASA Astrophysics Data System (ADS)
Voigt, A.
2013-08-01
I study the Hadley circulation of a completely ice-covered Snowball Earth through simulations with a comprehensive atmosphere general circulation model. Because the Snowball Earth atmosphere is an example of a dry atmosphere, these simulations allow me to test to what extent dry theories and idealized models capture the dynamics of dry Hadley circulations. Perpetual off-equatorial as well as seasonally-varying insolation is used, extending a previous study for perpetual on-equatorial (equinox) insolation. Vertical diffusion of momentum, representing the momentum transport of dry convection, is fundamental to the momentum budgets of both the winter and summer cells. In the zonal budget, it is the primary process balancing the Coriolis force. In the meridional budget, it mixes meridional momentum between the upper and the lower branch and thereby decelerates the circulation. Because of the latter, the circulation intensifies by a factor of three when vertical diffusion of momentum is suppressed. For seasonally-varying insolation, the circulation undergoes rapid transitions from the weak summer into the strong winter regime. Consistent with previous studies in idealized models, these transitions result from a mean-flow feedback, because of which they are insensitive to the treatment of vertical diffusion of momentum. Overall, the results corroborate previous findings for perpetual on-equatorial insolation. They demonstrate that an appropriate description of dry Hadley circulations, in particular their strength, needs to incorporate the vertical momentum transport by dry convection, a process that is neglected in most dry theories and idealized models. An improved estimate of the strength of the Snowball Earth Hadley circulation will also help to better constrain the climate of a possible Neoproterozoic Snowball Earth and its deglaciation threshold.
Simpson, James J.; Dettinger, M.D.; Gehrke, F.; McIntire, T.J.; Hufford, Gary L.
2004-01-01
Accurate prediction of available water supply from snowmelt is needed if the myriad of human, environmental, agricultural, and industrial demands for water are to be satisfied, especially given legislatively imposed conditions on its allocation. Robust retrievals of hydrologic basin model variables (e.g., insolation or areal extent of snow cover) provide several advantages over the current operational use of either point measurements or parameterizations to help to meet this requirement. Insolation can be provided at hourly time scales (or better if needed during rapid melt events associated with flooding) and at 1-km spatial resolution. These satellite-based retrievals incorporate the effects of highly variable (both in space and time) and unpredictable cloud cover on estimates of insolation. The insolation estimates are further adjusted for the effects of basin topography using a high-resolution digital elevation model prior to model input. Simulations of two Sierra Nevada rivers in the snowmelt seasons of 1998 and 1999 indicate that even the simplest improvements in modeled insolation can improve snowmelt simulations, with 10%-20% reductions in root-mean-square errors. Direct retrieval of the areal extent of snow cover may mitigate the need to rely entirely on internal calculations of this variable, a reliance that can yield large errors that are difficult to correct until long after the season is complete and that often leads to persistent underestimates or overestimates of the volumes of the water to operational reservoirs. Agencies responsible for accurately predicting available water resources from the melt of snowpack [e.g., both federal (the National Weather Service River Forecast Centers) and state (the California Department of Water Resources)] can benefit by incorporating concepts developed herein into their operational forecasting procedures. ?? 2004 American Meteorological Society.
Kosonen, Jukka; Kulmala, Juha-Pekka; Müller, Erich; Avela, Janne
2017-03-21
Anti-pronation orthoses, like medially posted insoles (MPI), have traditionally been used to treat various of lower limb problems. Yet, we know surprisingly little about their effects on overall foot motion and lower limb mechanics across walking and running, which represent highly different loading conditions. To address this issue, multi-segment foot and lower limb mechanics was examined among 11 overpronating men with normal (NORM) and MPI insoles during walking (self-selected speed 1.70±0.19m/s vs 1.72±0.20m/s, respectively) and running (4.04±0.17m/s vs 4.10±0.13m/s, respectively). The kinematic results showed that MPI reduced the peak forefoot eversion movement in respect to both hindfoot and tibia across walking and running when compared to NORM (p<0.05-0.01). No differences were found in hindfoot eversion between conditions. The kinetic results showed no insole effects in walking, but during running MPI shifted center of pressure medially under the foot (p<0.01) leading to an increase in frontal plane moments at the hip (p<0.05) and knee (p<0.05) joints and a reduction at the ankle joint (p<0.05). These findings indicate that MPI primarily controlled the forefoot motion across walking and running. While kinetic response to MPI was more pronounced in running than walking, kinematic effects were essentially similar across both modes. This suggests that despite higher loads placed upon lower limb during running, there is no need to have a stiffer insoles to achieve similar reduction in the forefoot motion than in walking. Copyright © 2017 Elsevier Ltd. All rights reserved.
Solar and temporal effects on Escherichia coli concentration at a Lake Michigan swimming beach
Whitman, Richard L.; Nevers, Meredith B.; Korinek, Ginger C.; Byappanahalli, Muruleedhara N.
2004-01-01
Studies on solar inactivation of Escherichia coli in freshwater and in situ have been limited. At 63rd St. Beach, Chicago, Ill., factors influencing the daily periodicity of culturable E. coli, particularly insolation, were examined. Water samples for E. coli analysis were collected twice daily between April and September 2000 three times a week along five transects in two depths of water. Hydrometeorological conditions were continuously logged: UV radiation, total insolation, wind speed and direction, wave height, and relative lake level. On 10 days, transects were sampled hourly from 0700 to 1500 h. The effect of sunlight on E. coliinactivation was evaluated with dark and transparent in situ mesocosms and ambient lake water. For the study, the number of E. coli samples collected (n) was 2,676. During sunny days, E. coli counts decreased exponentially with day length and exposure to insolation, but on cloudy days, E. coli inactivation was diminished; the E. coli decay rate was strongly influenced by initial concentration. In situ experiments confirmed that insolation primarily inactivated E. coli; UV radiation only marginally affected E. coliconcentration. The relationship between insolation and E. coli density is complicated by relative lake level, wave height, and turbidity, all of which are often products of wind vector. Continuous importation and nighttime replenishment of E. coli were evident. These findings (i) suggest that solar inactivation is an important mechanism for natural reduction of indicator bacteria in large freshwater bodies and (ii) have implications for management strategies of nontidal waters and the use of E. coli as an indicator organism.
Multimodel ensembles of wheat growth: many models are better than one.
Martre, Pierre; Wallach, Daniel; Asseng, Senthold; Ewert, Frank; Jones, James W; Rötter, Reimund P; Boote, Kenneth J; Ruane, Alex C; Thorburn, Peter J; Cammarano, Davide; Hatfield, Jerry L; Rosenzweig, Cynthia; Aggarwal, Pramod K; Angulo, Carlos; Basso, Bruno; Bertuzzi, Patrick; Biernath, Christian; Brisson, Nadine; Challinor, Andrew J; Doltra, Jordi; Gayler, Sebastian; Goldberg, Richie; Grant, Robert F; Heng, Lee; Hooker, Josh; Hunt, Leslie A; Ingwersen, Joachim; Izaurralde, Roberto C; Kersebaum, Kurt Christian; Müller, Christoph; Kumar, Soora Naresh; Nendel, Claas; O'leary, Garry; Olesen, Jørgen E; Osborne, Tom M; Palosuo, Taru; Priesack, Eckart; Ripoche, Dominique; Semenov, Mikhail A; Shcherbak, Iurii; Steduto, Pasquale; Stöckle, Claudio O; Stratonovitch, Pierre; Streck, Thilo; Supit, Iwan; Tao, Fulu; Travasso, Maria; Waha, Katharina; White, Jeffrey W; Wolf, Joost
2015-02-01
Crop models of crop growth are increasingly used to quantify the impact of global changes due to climate or crop management. Therefore, accuracy of simulation results is a major concern. Studies with ensembles of crop models can give valuable information about model accuracy and uncertainty, but such studies are difficult to organize and have only recently begun. We report on the largest ensemble study to date, of 27 wheat models tested in four contrasting locations for their accuracy in simulating multiple crop growth and yield variables. The relative error averaged over models was 24-38% for the different end-of-season variables including grain yield (GY) and grain protein concentration (GPC). There was little relation between error of a model for GY or GPC and error for in-season variables. Thus, most models did not arrive at accurate simulations of GY and GPC by accurately simulating preceding growth dynamics. Ensemble simulations, taking either the mean (e-mean) or median (e-median) of simulated values, gave better estimates than any individual model when all variables were considered. Compared to individual models, e-median ranked first in simulating measured GY and third in GPC. The error of e-mean and e-median declined with an increasing number of ensemble members, with little decrease beyond 10 models. We conclude that multimodel ensembles can be used to create new estimators with improved accuracy and consistency in simulating growth dynamics. We argue that these results are applicable to other crop species, and hypothesize that they apply more generally to ecological system models. © 2014 John Wiley & Sons Ltd.
NASA Astrophysics Data System (ADS)
Wu, Xiongwu; Brooks, Bernard R.
2011-11-01
The self-guided Langevin dynamics (SGLD) is a method to accelerate conformational searching. This method is unique in the way that it selectively enhances and suppresses molecular motions based on their frequency to accelerate conformational searching without modifying energy surfaces or raising temperatures. It has been applied to studies of many long time scale events, such as protein folding. Recent progress in the understanding of the conformational distribution in SGLD simulations makes SGLD also an accurate method for quantitative studies. The SGLD partition function provides a way to convert the SGLD conformational distribution to the canonical ensemble distribution and to calculate ensemble average properties through reweighting. Based on the SGLD partition function, this work presents a force-momentum-based self-guided Langevin dynamics (SGLDfp) simulation method to directly sample the canonical ensemble. This method includes interaction forces in its guiding force to compensate the perturbation caused by the momentum-based guiding force so that it can approximately sample the canonical ensemble. Using several example systems, we demonstrate that SGLDfp simulations can approximately maintain the canonical ensemble distribution and significantly accelerate conformational searching. With optimal parameters, SGLDfp and SGLD simulations can cross energy barriers of more than 15 kT and 20 kT, respectively, at similar rates for LD simulations to cross energy barriers of 10 kT. The SGLDfp method is size extensive and works well for large systems. For studies where preserving accessible conformational space is critical, such as free energy calculations and protein folding studies, SGLDfp is an efficient approach to search and sample the conformational space.
Multimodel Ensembles of Wheat Growth: More Models are Better than One
NASA Technical Reports Server (NTRS)
Martre, Pierre; Wallach, Daniel; Asseng, Senthold; Ewert, Frank; Jones, James W.; Rotter, Reimund P.; Boote, Kenneth J.; Ruane, Alex C.; Thorburn, Peter J.; Cammarano, Davide;
2015-01-01
Crop models of crop growth are increasingly used to quantify the impact of global changes due to climate or crop management. Therefore, accuracy of simulation results is a major concern. Studies with ensembles of crop models can give valuable information about model accuracy and uncertainty, but such studies are difficult to organize and have only recently begun. We report on the largest ensemble study to date, of 27 wheat models tested in four contrasting locations for their accuracy in simulating multiple crop growth and yield variables. The relative error averaged over models was 24-38% for the different end-of-season variables including grain yield (GY) and grain protein concentration (GPC). There was little relation between error of a model for GY or GPC and error for in-season variables. Thus, most models did not arrive at accurate simulations of GY and GPC by accurately simulating preceding growth dynamics. Ensemble simulations, taking either the mean (e-mean) or median (e-median) of simulated values, gave better estimates than any individual model when all variables were considered. Compared to individual models, e-median ranked first in simulating measured GY and third in GPC. The error of e-mean and e-median declined with an increasing number of ensemble members, with little decrease beyond 10 models. We conclude that multimodel ensembles can be used to create new estimators with improved accuracy and consistency in simulating growth dynamics. We argue that these results are applicable to other crop species, and hypothesize that they apply more generally to ecological system models.
NASA Technical Reports Server (NTRS)
Maggioni, V.; Anagnostou, E. N.; Reichle, R. H.
2013-01-01
The contribution of rainfall forcing errors relative to model (structural and parameter) uncertainty in the prediction of soil moisture is investigated by integrating the NASA Catchment Land Surface Model (CLSM), forced with hydro-meteorological data, in the Oklahoma region. Rainfall-forcing uncertainty is introduced using a stochastic error model that generates ensemble rainfall fields from satellite rainfall products. The ensemble satellite rain fields are propagated through CLSM to produce soil moisture ensembles. Errors in CLSM are modeled with two different approaches: either by perturbing model parameters (representing model parameter uncertainty) or by adding randomly generated noise (representing model structure and parameter uncertainty) to the model prognostic variables. Our findings highlight that the method currently used in the NASA GEOS-5 Land Data Assimilation System to perturb CLSM variables poorly describes the uncertainty in the predicted soil moisture, even when combined with rainfall model perturbations. On the other hand, by adding model parameter perturbations to rainfall forcing perturbations, a better characterization of uncertainty in soil moisture simulations is observed. Specifically, an analysis of the rank histograms shows that the most consistent ensemble of soil moisture is obtained by combining rainfall and model parameter perturbations. When rainfall forcing and model prognostic perturbations are added, the rank histogram shows a U-shape at the domain average scale, which corresponds to a lack of variability in the forecast ensemble. The more accurate estimation of the soil moisture prediction uncertainty obtained by combining rainfall and parameter perturbations is encouraging for the application of this approach in ensemble data assimilation systems.
Multimodel Ensembles of Wheat Growth: Many Models are Better than One
NASA Technical Reports Server (NTRS)
Martre, Pierre; Wallach, Daniel; Asseng, Senthold; Ewert, Frank; Jones, James W.; Rotter, Reimund P.; Boote, Kenneth J.; Ruane, Alexander C.; Thorburn, Peter J.; Cammarano, Davide;
2015-01-01
Crop models of crop growth are increasingly used to quantify the impact of global changes due to climate or crop management. Therefore, accuracy of simulation results is a major concern. Studies with ensembles of crop model scan give valuable information about model accuracy and uncertainty, but such studies are difficult to organize and have only recently begun. We report on the largest ensemble study to date, of 27 wheat models tested in four contrasting locations for their accuracy in simulating multiple crop growth and yield variables. The relative error averaged over models was 2438 for the different end-of-season variables including grain yield (GY) and grain protein concentration (GPC). There was little relation between error of a model for GY or GPC and error for in-season variables. Thus, most models did not arrive at accurate simulations of GY and GPC by accurately simulating preceding growth dynamics. Ensemble simulations, taking either the mean (e-mean) or median (e-median) of simulated values, gave better estimates than any individual model when all variables were considered. Compared to individual models, e-median ranked first in simulating measured GY and third in GPC. The error of e-mean and e-median declined with an increasing number of ensemble members, with little decrease beyond 10 models. We conclude that multimodel ensembles can be used to create new estimators with improved accuracy and consistency in simulating growth dynamics. We argue that these results are applicable to other crop species, and hypothesize that they apply more generally to ecological system models.
A Community Terrain-Following Ocean Modeling System (ROMS)
2015-09-30
funded NOPP project titled: Toward the Development of a Coupled COAMPS-ROMS Ensemble Kalman filter and adjoint with a focus on the Indian Ocean and the...surface temperature and surface salinity daily averages for 31-Jan-2014. Similarly, Figure 3 shows the sea surface height averaged solution for 31-Jan... temperature (upper panel; Celsius) and surface salinity (lower panel) for 31-Jan-2014. The refined solution for the Hudson Canyon grid is overlaid on
Insolation-oriented model of photovoltaic module using Matlab/Simulink
DOE Office of Scientific and Technical Information (OSTI.GOV)
Tsai, Huan-Liang
2010-07-15
This paper presents a novel model of photovoltaic (PV) module which is implemented and analyzed using Matlab/Simulink software package. Taking the effect of sunlight irradiance on the cell temperature, the proposed model takes ambient temperature as reference input and uses the solar insolation as a unique varying parameter. The cell temperature is then explicitly affected by the sunlight intensity. The output current and power characteristics are simulated and analyzed using the proposed PV model. The model verification has been confirmed through an experimental measurement. The impact of solar irradiation on cell temperature makes the output characteristic more practical. In addition,more » the insolation-oriented PV model enables the dynamics of PV power system to be analyzed and optimized more easily by applying the environmental parameters of ambient temperature and solar irradiance. (author)« less