Sample records for environmental 3e analysis

  1. Science-based Framework for Environmental Benefits Assessment

    DTIC Science & Technology

    2013-03-01

    ER D C/ EL T R -1 3 -4 Environmental Benefits Analysis Program Science-based Framework for Environmental Benefits Assessment E nv ir...acwc.sdp.sirsi.net/client/default. Environmental Benefits Analysis Program ERDC/EL TR-13-4 March 2013 Science-based Framework for Environmental Benefits ...evaluating ecosystem restoration benefits within the context of USACE Civil Works planning process. An emphasis is placed on knowledge gained from

  2. Integrated Logistic Support Concerns, Electromagnetic Environmental Effects

    DTIC Science & Technology

    1991-12-19

    AVSCOM Directorate for Engineering, AVSCOM ATTN: AMSAV-ES 4300 Goodfellow Blvd St. Louis, MO 63120-1798 OGDEN/ERC Government Systems, Applied ... Engineering Group, analysis tools for the PM E3 Test Facilities: Picatinny Arsenal Aberdeen Proving Ground White Sands Missile Range TRADOC E3 Awareness

  3. MICROARRAY DATA ANALYSIS USING MULTIPLE STATISTICAL MODELS

    EPA Science Inventory

    Microarray Data Analysis Using Multiple Statistical Models

    Wenjun Bao1, Judith E. Schmid1, Amber K. Goetz1, Ming Ouyang2, William J. Welsh2,Andrew I. Brooks3,4, ChiYi Chu3,Mitsunori Ogihara3,4, Yinhe Cheng5, David J. Dix1. 1National Health and Environmental Effects Researc...

  4. High degree of genetic diversity of non-polio enteroviruses identified in Georgia by environmental and clinical surveillance, 2002-2005.

    PubMed

    Khetsuriani, N; Kutateladze, T; Zangaladze, E; Shutkova, T; Peñaranda, S; Nix, W A; Pallansch, M A; Oberste, M S

    2010-11-01

    Enterovirus surveillance data are useful for establishing temporal and geographical patterns of circulation and for virus characterization to determine phylogenetic relationships between strains. Almost no information is available on circulating enteroviruses in Georgia and the surrounding region. To describe enterovirus circulation in Georgia, determine relationships with previously characterized strains and assess the role of environmental and clinical enterovirus surveillance, this study analysed a total of 112 non-polio enterovirus isolates identified during 2002-2005 from sewage and human stool samples. Viruses were isolated in cell culture using standard methods and typed by partial sequencing of the VP1 gene. A total of 20 different non-polio enterovirus serotypes were identified over the 4-year period. The most commonly detected enteroviruses included echovirus (E) 6 (21 isolates; 18.8 %), E20, E3 and E7 (11 isolates each; 9.8 %), E11, coxsackievirus (CV) B4 and CVB5 (seven isolates each; 6.3 %), and E13, E19 and E30 (six isolates each; 5.4 %). Phylogenetic analysis showed that many serotypes were represented by more than one genetic lineage. The present study showed a very high degree of enterovirus diversity in Georgia and demonstrated the added value of environmental enterovirus surveillance, particularly in settings with limited clinical surveillance. Several serotypes would not have been detected without having both clinical and environmental surveillance in place. Several serotypes detected in Georgia were among those rarely reported in the USA and Europe (e.g. E3, E20 and E19). As the emergence of new genetic lineages of enterovirus in a particular area is often associated with large-scale outbreaks, continued monitoring of enterovirus strains by both environmental and clinical surveillance and genetic characterization should be encouraged.

  5. A method to associate all possible combinations of genetic and environmental factors using GxE landscape plot.

    PubMed

    Nagaie, Satoshi; Ogishima, Soichi; Nakaya, Jun; Tanaka, Hiroshi

    2015-01-01

    Genome-wide association studies (GWAS) and linkage analysis has identified many single nucleotide polymorphisms (SNPs) related to disease. There are many unknown SNPs whose minor allele frequencies (MAFs) as low as 0.005 having intermediate effects with odds ratio between 1.5~3.0. Low frequency variants having intermediate effects on disease pathogenesis are believed to have complex interactions with environmental factors called gene-environment interactions (GxE). Hence, we describe a model using 3D Manhattan plot called GxE landscape plot to visualize the association of p-values for gene-environment interactions (GxE). We used the Gene-Environment iNteraction Simulator 2 (GENS2) program to simulate interactions between two genetic loci and one environmental factor in this exercise. The dataset used for training contains disease status, gender, 20 environmental exposures and 100 genotypes for 170 subjects, and p-values were calculated by Cochran-Mantel-Haenszel chi-squared test on known data. Subsequently, we created a 3D GxE landscape plot of negative logarithm of the association of p-values for all the possible combinations of genetic and environmental factors with their hierarchical clustering. Thus, the GxE landscape plot is a valuable model to predict association of p-values for GxE and similarity among genotypes and environments in the context of disease pathogenesis. GxE - Gene-environment interactions, GWAS - Genome-wide association study, MAFs - Minor allele frequencies, SNPs - Single nucleotide polymorphisms, EWAS - Environment-wide association study, FDR - False discovery rate, JPT+CHB - HapMap population of Japanese in Tokyo, Japan - Han Chinese in Beijing.

  6. Comparative genomic analysis of clinical and environmental Vibrio vulnificus isolates revealed biotype 3 evolutionary relationships.

    PubMed

    Koton, Yael; Gordon, Michal; Chalifa-Caspi, Vered; Bisharat, Naiel

    2014-01-01

    In 1996 a common-source outbreak of severe soft tissue and bloodstream infections erupted among Israeli fish farmers and fish consumers due to changes in fish marketing policies. The causative pathogen was a new strain of Vibrio vulnificus, named biotype 3, which displayed a unique biochemical and genotypic profile. Initial observations suggested that the pathogen erupted as a result of genetic recombination between two distinct populations. We applied a whole genome shotgun sequencing approach using several V. vulnificus strains from Israel in order to study the pan genome of V. vulnificus and determine the phylogenetic relationship of biotype 3 with existing populations. The core genome of V. vulnificus based on 16 draft and complete genomes consisted of 3068 genes, representing between 59 and 78% of the whole genome of 16 strains. The accessory genome varied in size from 781 to 2044 kbp. Phylogenetic analysis based on whole, core, and accessory genomes displayed similar clustering patterns with two main clusters, clinical (C) and environmental (E), all biotype 3 strains formed a distinct group within the E cluster. Annotation of accessory genomic regions found in biotype 3 strains and absent from the core genome yielded 1732 genes, of which the vast majority encoded hypothetical proteins, phage-related proteins, and mobile element proteins. A total of 1916 proteins (including 713 hypothetical proteins) were present in all human pathogenic strains (both biotype 3 and non-biotype 3) and absent from the environmental strains. Clustering analysis of the non-hypothetical proteins revealed 148 protein clusters shared by all human pathogenic strains; these included transcriptional regulators, arylsulfatases, methyl-accepting chemotaxis proteins, acetyltransferases, GGDEF family proteins, transposases, type IV secretory system (T4SS) proteins, and integrases. Our study showed that V. vulnificus biotype 3 evolved from environmental populations and formed a genetically distinct group within the E-cluster. The unique epidemiological circumstances facilitated disease outbreak and brought this genotype to the attention of the scientific community.

  7. The Need and Requirements for Validating Damage Detection Capability

    DTIC Science & Technology

    2011-09-01

    Testing of Airborne Equipment [11], 2) Materials / Structure Certification, 3) NDE (POD) Validation Procedures, 4) Failure Mode Effects and Criticality...Analysis (FMECA), and 5) Cost Benefits Analysis [12]. Existing procedures for environmental testing of airborne equipment ensure flight...e.g. ultrasound or eddy current), damage type or failure conditions to detect, criticality of the damage state (e.g. safety of flight), likelihood of

  8. The environmental footprint of a membrane bioreactor treatment process through Life Cycle Analysis.

    PubMed

    Ioannou-Ttofa, L; Foteinis, S; Chatzisymeon, E; Fatta-Kassinos, D

    2016-10-15

    This study includes an environmental analysis of a membrane bioreactor (MBR), the objective being to quantitatively define the inventory of the resources consumed and estimate the emissions produced during its construction, operation and end-of-life deconstruction. The environmental analysis was done by the life cycle assessment (LCA) methodology, in order to establish with a broad perspective and in a rigorous and objective way the environmental footprint and the main environmental hotspots of the examined technology. Raw materials, equipment, transportation, energy use, as well as air- and waterborne emissions were quantified using as a functional unit, 1m(3) of urban wastewater. SimaPro 8.0.3.14 was used as the LCA analysis tool, and two impact assessment methods, i.e. IPCC 2013 version 1.00 and ReCiPe version 1.10, were employed. The main environmental hotspots of the MBR pilot unit were identified to be the following: (i) the energy demand, which is by far the most crucial parameter that affects the sustainability of the whole process, and (ii) the material of the membrane units. Overall, the MBR technology was found to be a sustainable solution for urban wastewater treatment, with the construction phase having a minimal environmental impact, compared to the operational phase. Moreover, several alternative scenarios and areas of potential improvement, such as the diversification of the electricity mix and the material of the membrane units, were examined, in order to minimize as much as possible the overall environmental footprint of this MBR system. It was shown that the energy mix can significantly affect the overall sustainability of the MBR pilot unit (i.e. up to 95% reduction of the total greenhouse gas emissions was achieved with the use of an environmentally friendly energy mix), and the contribution of the construction and operational phase to the overall environmental footprint of the system. Copyright © 2016 Elsevier B.V. All rights reserved.

  9. Feasibility Study for an Air Force Environmental Model and Data Exchange. Volume 2. Appendices B - E. Air Force Needs and Capabilities Survey.

    DTIC Science & Technology

    1983-08-01

    o Environmental System Applications o Enviromental System Support and User Staff TABLE C-14l. KEY USER-SELECTED USAF ENVIRONMENTAL ISSUES. Importance...general analysis procedure. Please note that in this section the word "environment" includes both the natural and the cultural environment. Socio -economic...YOUR GROUP *(INCLUDES CULTURAL AND SOCIO -ECONOMIC SCIENCE) ~~.| ,. -* . ’ . *" . . . . " . " ".t " . -’ . . , " • - ". " . . ". - 3.7 ENVIRONMENTAL

  10. LiDAR Vegetation Investigation and Signature Analysis System (LVISA)

    NASA Astrophysics Data System (ADS)

    Höfle, Bernhard; Koenig, Kristina; Griesbaum, Luisa; Kiefer, Andreas; Hämmerle, Martin; Eitel, Jan; Koma, Zsófia

    2015-04-01

    Our physical environment undergoes constant changes in space and time with strongly varying triggers, frequencies, and magnitudes. Monitoring these environmental changes is crucial to improve our scientific understanding of complex human-environmental interactions and helps us to respond to environmental change by adaptation or mitigation. The three-dimensional (3D) description of the Earth surface features and the detailed monitoring of surface processes using 3D spatial data have gained increasing attention within the last decades, such as in climate change research (e.g., glacier retreat), carbon sequestration (e.g., forest biomass monitoring), precision agriculture and natural hazard management. In all those areas, 3D data have helped to improve our process understanding by allowing quantifying the structural properties of earth surface features and their changes over time. This advancement has been fostered by technological developments and increased availability of 3D sensing systems. In particular, LiDAR (light detection and ranging) technology, also referred to as laser scanning, has made significant progress and has evolved into an operational tool in environmental research and geosciences. The main result of LiDAR measurements is a highly spatially resolved 3D point cloud. Each point within the LiDAR point cloud has a XYZ coordinate associated with it and often additional information such as the strength of the returned backscatter. The point cloud provided by LiDAR contains rich geospatial, structural, and potentially biochemical information about the surveyed objects. To deal with the inherently unorganized datasets and the large data volume (frequently millions of XYZ coordinates) of LiDAR datasets, a multitude of algorithms for automatic 3D object detection (e.g., of single trees) and physical surface description (e.g., biomass) have been developed. However, so far the exchange of datasets and approaches (i.e., extraction algorithms) among LiDAR users lacks behind. We propose a novel concept, the LiDAR Vegetation Investigation and Signature Analysis System (LVISA), which shall enhance sharing of i) reference datasets of single vegetation objects with rich reference data (e.g., plant species, basic plant morphometric information) and ii) approaches for information extraction (e.g., single tree detection, tree species classification based on waveform LiDAR features). We will build an extensive LiDAR data repository for supporting the development and benchmarking of LiDAR-based object information extraction. The LiDAR Vegetation Investigation and Signature Analysis System (LVISA) uses international web service standards (Open Geospatial Consortium, OGC) for geospatial data access and also analysis (e.g., OGC Web Processing Services). This will allow the research community identifying plant object specific vegetation features from LiDAR data, while accounting for differences in LiDAR systems (e.g., beam divergence), settings (e.g., point spacing), and calibration techniques. It is the goal of LVISA to develop generic 3D information extraction approaches, which can be seamlessly transferred to other datasets, timestamps and also extraction tasks. The current prototype of LVISA can be visited and tested online via http://uni-heidelberg.de/lvisa. Video tutorials provide a quick overview and entry into the functionality of LVISA. We will present the current advances of LVISA and we will highlight future research and extension of LVISA, such as integrating low-cost LiDAR data and datasets acquired by highly temporal scanning of vegetation (e.g., continuous measurements). Everybody is invited to join the LVISA development and share datasets and analysis approaches in an interoperable way via the web-based LVISA geoportal.

  11. Measuring the distribution of equity in terms of energy, environmental, and economic costs in the fuel cycles of alternative fuel vehicles with hydrogen pathway scenarios

    NASA Astrophysics Data System (ADS)

    Meyer, Patrick E.

    Numerous analyses exist which examine the energy, environmental, and economic tradeoffs between conventional gasoline vehicles and hydrogen fuel cell vehicles powered by hydrogen produced from a variety of sources. These analyses are commonly referred to as "E3" analyses because of their inclusion of Energy, Environmental, and Economic indicators. Recent research as sought a means to incorporate social Equity into E3 analyses, thus producing an "E4" analysis. However, E4 analyses in the realm of energy policy are uncommon, and in the realm of alternative transportation fuels, E4 analyses are extremely rare. This dissertation discusses the creation of a novel E4 simulation tool usable to weigh energy, environmental, economic, and equity trade-offs between conventional gasoline vehicles and alternative fuel vehicles, with specific application to hydrogen fuel cell vehicles. The model, dubbed the F uel Life-cycle Analysis of Solar Hydrogen -- Energy, Environment, Economic & Equity model, or FLASH-E4, is a total fuel-cycle model that combines energy, environmental, and economic analysis methodologies with the addition of an equity analysis component. The model is capable of providing results regarding total fuel-cycle energy consumption, emissions production, energy and environmental cost, and level of social equity within a population in which low-income drivers use CGV technology and high-income drivers use a number of advanced hydrogen FCV technologies. Using theories of equity and social indicators conceptually embodied in the Lorenz Curve and Gini Index, the equity of the distribution of societal energy and environmental costs are measured for a population in which some drivers use CGVs and other drivers use FCVs. It is found, based on baseline input data representative of the United States (US), that the distribution of energy and environmental costs in a population in which some drivers use CGVs and other drivers use natural gas-based hydrogen FCVs can be moderately inequitable. However, the distribution of energy and environmental costs in a population in which some drivers use CGVs and other drivers use solar-electrolysis-based FCVs can be extremely inequitable. Further, it is found that the method of production and delivery of hydrogen (i.e. centralized production or refueling station-based production) can have an impact on the equity of energy and environmental costs. The implications of these results are interesting, in that wealthy people purchase FCVs that have high upfront costs and very low societal energy and environmental costs. Simultaneously, however, low-income people purchase CGVs that have low upfront costs and very high societal energy and environmental costs. In this situation, due to the high-polluting nature of CGV technology in relation to FCV technology, CGV drivers account for more than their equitable share of energy and environmental costs. Scenarios are conducted which explore modifications of assumptions, such as the price of oil, price of natural gas, cost to offset emissions, consumer purchase price of FCVs, and the level of taxation on the cost streams. Among other findings, it is found that altering the purchase price of an FCV has the greatest impact on social equity whereas altering the cost to offset fuel-cycle emissions has the least impact, indicating that policy mechanisms aimed at incentivizing FCVs may have a more positive impact on social equity than policies aimed at mitigating emissions. Based on the results of the scenario analysis, policy recommendations are formulated which seek to maximize social equity in populations in which not all drivers use the same vehicular technology. The policies, if implemented as a single portfolio, would assist a systematic deviation away from the fossil fuel energy economy while ensuring that social equity is preserved to the greatest degree possible. (Abstract shortened by UMI.)

  12. Environmental Impact Analysis Process. Volume 3. Preliminary Final Environmental Impact Statement Construction and Operation of Space Launch Complex 7

    DTIC Science & Technology

    1989-10-23

    817) 824-5606. Reelfoot Lake Water Level believes that the proposed timber EIS No. 890197. Final, USA. UT, Tooele Management Plan. Implementation...2: Incidenial lake erit The potential need for an incidental take permit is discussed in Section 4.4.1, Regional Environment. Comment No. 3...and Crow Indian Tribes. Yellowstone, E02, Lake Catamount ResortAvailability Big Horn and Rosebud Counties, MT, Construction. Special Use Permit

  13. Environmental estrogens in a drinking water reservoir area in Shanghai: occurrence, colloidal contribution and risk assessment.

    PubMed

    Nie, Minghua; Yang, Yi; Liu, Min; Yan, Caixia; Shi, Hao; Dong, Wenbo; Zhou, John L

    2014-07-15

    The occurrence and multi-phase distribution of six environmental estrogen compounds were investigated in a drinking water reservoir area by analyzing estrogens in suspended particulate matter (SPM), filtrate (conventional dissolved phase, <1 μm), permeate (truly soluble phase, <1 kDa) and retentate (colloidal phase, 1 kDa to 1 μm). The estrogen concentrations at different sites occurred in the following order: animal feed operation (AFO) wastewater-affected streams>tributaries>main stream channel. Correlation analysis showed that organic carbon (OC) contents had significantly positive correlations with environmental estrogens in filtrate, SPM and colloidal phases, respectively, indicating the important role played by OC. Aquatic colloids, often neglected, showed a much higher sorption capability of environmental estrogens compared to SPM. Similar Kcoc values in three types of sampling sites showed that colloids could be transported from AFO wastewater to tributaries and further into the main river channel. Mass balance calculations showed that 14.5-68.4% of OP, 4.5-32.1% of BPA, 2.0-58.4% of E1, 8.36-72.0% of E2, 0-20.6% of EE2, 3.4-62.7% of E3 and 8.3-36.1% of total estrogens were associated with colloidal fractions, suggesting that the colloids could act as a significant sink for environmental estrogens. Risk assessment demonstrated that the occurrence of environmental estrogens might pose a risk to aquatic organisms in the study area. Copyright © 2013 Elsevier B.V. All rights reserved.

  14. Executable research compendia in geoscience research infrastructures

    NASA Astrophysics Data System (ADS)

    Nüst, Daniel

    2017-04-01

    From generation through analysis and collaboration to communication, scientific research requires the right tools. Scientists create their own software using third party libraries and platforms. Cloud computing, Open Science, public data infrastructures, and Open Source enable scientists with unprecedented opportunites, nowadays often in a field "Computational X" (e.g. computational seismology) or X-informatics (e.g. geoinformatics) [0]. This increases complexity and generates more innovation, e.g. Environmental Research Infrastructures (environmental RIs [1]). Researchers in Computational X write their software relying on both source code (e.g. from https://github.com) and binary libraries (e.g. from package managers such as APT, https://wiki.debian.org/Apt, or CRAN, https://cran.r-project.org/). They download data from domain specific (cf. https://re3data.org) or generic (e.g. https://zenodo.org) data repositories, and deploy computations remotely (e.g. European Open Science Cloud). The results themselves are archived, given persistent identifiers, connected to other works (e.g. using https://orcid.org/), and listed in metadata catalogues. A single researcher, intentionally or not, interacts with all sub-systems of RIs: data acquisition, data access, data processing, data curation, and community support [3]. To preserve computational research [3] proposes the Executable Research Compendium (ERC), a container format closing the gap of dependency preservation by encapsulating the runtime environment. ERCs and RIs can be integrated for different uses: (i) Coherence: ERC services validate completeness, integrity and results (ii) Metadata: ERCs connect the different parts of a piece of research and faciliate discovery (iii) Exchange and Preservation: ERC as usable building blocks are the shared and archived entity (iv) Self-consistency: ERCs remove dependence on ephemeral sources (v) Execution: ERC services create and execute a packaged analysis but integrate with existing platforms for display and control These integrations are vital for capturing workflows in RIs and connect key stakeholders (scientists, publishers, librarians). They are demonstrated using developments by the DFG-funded project Opening Reproducible Research (http://o2r.info). Semi-automatic creation of ERCs based on research workflows is a core goal of the project. References [0] Tony Hey, Stewart Tansley, Kristin Tolle (eds), 2009. The Fourth Paradigm: Data-Intensive Scientific Discovery. Microsoft Research. [1] P. Martin et al., Open Information Linking for Environmental Research Infrastructures, 2015 IEEE 11th International Conference on e-Science, Munich, 2015, pp. 513-520. doi: 10.1109/eScience.2015.66 [2] Y. Chen et al., Analysis of Common Requirements for Environmental Science Research Infrastructures, The International Symposium on Grids and Clouds (ISGC) 2013, Taipei, 2013, http://pos.sissa.it/archive/conferences/179/032/ISGC [3] Opening Reproducible Research, Geophysical Research Abstracts Vol. 18, EGU2016-7396, 2016, http://meetingorganizer.copernicus.org/EGU2016/EGU2016-7396.pdf

  15. Classification and Clustering Methods for Multiple Environmental Factors in Gene-Environment Interaction: Application to the Multi-Ethnic Study of Atherosclerosis.

    PubMed

    Ko, Yi-An; Mukherjee, Bhramar; Smith, Jennifer A; Kardia, Sharon L R; Allison, Matthew; Diez Roux, Ana V

    2016-11-01

    There has been an increased interest in identifying gene-environment interaction (G × E) in the context of multiple environmental exposures. Most G × E studies analyze one exposure at a time, but we are exposed to multiple exposures in reality. Efficient analysis strategies for complex G × E with multiple environmental factors in a single model are still lacking. Using the data from the Multiethnic Study of Atherosclerosis, we illustrate a two-step approach for modeling G × E with multiple environmental factors. First, we utilize common clustering and classification strategies (e.g., k-means, latent class analysis, classification and regression trees, Bayesian clustering using Dirichlet Process) to define subgroups corresponding to distinct environmental exposure profiles. Second, we illustrate the use of an additive main effects and multiplicative interaction model, instead of the conventional saturated interaction model using product terms of factors, to study G × E with the data-driven exposure subgroups defined in the first step. We demonstrate useful analytical approaches to translate multiple environmental exposures into one summary class. These tools not only allow researchers to consider several environmental exposures in G × E analysis but also provide some insight into how genes modify the effect of a comprehensive exposure profile instead of examining effect modification for each exposure in isolation.

  16. Nitrate source identification in groundwater of multiple land-use areas by combining isotopes and multivariate statistical analysis: A case study of Asopos basin (Central Greece).

    PubMed

    Matiatos, Ioannis

    2016-01-15

    Nitrate (NO3) is one of the most common contaminants in aquatic environments and groundwater. Nitrate concentrations and environmental isotope data (δ(15)N-NO3 and δ(18)O-NO3) from groundwater of Asopos basin, which has different land-use types, i.e., a large number of industries (e.g., textile, metal processing, food, fertilizers, paint), urban and agricultural areas and livestock breeding facilities, were analyzed to identify the nitrate sources of water contamination and N-biogeochemical transformations. A Bayesian isotope mixing model (SIAR) and multivariate statistical analysis of hydrochemical data were used to estimate the proportional contribution of different NO3 sources and to identify the dominant factors controlling the nitrate content of the groundwater in the region. The comparison of SIAR and Principal Component Analysis showed that wastes originating from urban and industrial zones of the basin are mainly responsible for nitrate contamination of groundwater in these areas. Agricultural fertilizers and manure likely contribute to groundwater contamination away from urban fabric and industrial land-use areas. Soil contribution to nitrate contamination due to organic matter is higher in the south-western part of the area far from the industries and the urban settlements. The present study aims to highlight the use of environmental isotopes combined with multivariate statistical analysis in locating sources of nitrate contamination in groundwater leading to a more effective planning of environmental measures and remediation strategies in river basins and water bodies as defined by the European Water Frame Directive (Directive 2000/60/EC).

  17. Linking benthic biodiversity and environmental conditions at the sea floor combining statistical and mechanistic modeling. Case study on the Black Sea's northwestern shelf.

    NASA Astrophysics Data System (ADS)

    Drion, Roxanne; Capet, Arthur; Gregoire, Marilaure

    2014-05-01

    The preservation of the health and biodiversity of benthic ecosystems is a crucial priority in order to achieve the Good Environmental Status (GES) of marine waters. The multiple pressures acting on the ocean, and in particular, on the coastal zone may prevent the maintenance of biodiversity either directly (e.g. trawling, dredging) or indirectly by modifying environmental conditions at the sea floor (e.g. eutrophication, pollution, acidification, warming). The management of the GES of the benthos in a changing environment and the definition of management strategies (e.g. nutrient reduction) that would preserve GES require tools able to predict the modifications of environmental conditions and to link these modifications to the status of the benthic system. Coupled biogeochemical-circulation models provide a large amount of information on physical (e.g. currents, salinity, temperature, shear stress) and biochemical conditions (e.g. oxygen, inorganic nutrients, sinking detritus) but cannot provide an information on species richness. We propose to link these aspects by applying canonical ordination techniques (e.g. Redundancy Analysis, CoInertia Analysis) on a large data set on macrobenthos collected on the Black Sea's north-western shelf with in-situ sediment data (e.g. granulometry, carbon and nitrogen content, C/N ratio, CaCO3 content) and bottom conditions (e.g. shear stress, level of oxygen stress, flux of organic matter to the sediments) provided by a three dimensional model. Beyond taxonomic description, the analysis is performed on the functional composition of the macrobenthos: A trait-based approach is used to assess the functional composition of the macrobenthos by associating the considered species to a list of biological, ecological and behavioral traits. This approach allows to appraise how local conditions determine the functional and taxonomical diversity and provides a mean to evaluate the impact of habitat alteration on the ecological role of benthic assemblages. A particular attention is given to the influence of seasonal hypoxia on benthic biotopes composition.

  18. 77 FR 29626 - Application Ready for Environmental Analysis and Soliciting Comments, Recommendations, Terms and...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2012-05-18

    ... Hydroelectric, LLC (BOST3). e. Name of Project: Red River Lock & Dam No. 3 Hydroelectric Project. f. Location: The proposed project would be located at the existing U.S. Army Corps of Engineer's (Corps) Red River Lock & Dam No. 3 on the Red River, in Natchitoches Parish near the City of Colfax, Louisiana. The...

  19. Comparative estrogenicity of endogenous, environmental and dietary estrogens in pregnant women I: Serum levels, variability and the basis for urinary biomonitoring of serum estrogenicity

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Fleck, Stefanie C.; Twaddle, Nathan C.; Churchwell, Mona I.

    Biomonitoring of human exposure to estrogens most frequently focuses on environmental and dietary estrogens, and infrequently includes measures of exposure to potent endogenous estrogens present in serum. Pregnancy is a developmentally sensitive period during which “added” serum estrogenicity exceeding normal intra-individual daily variability may be of particular relevance. Here, we made repeated measurements of serum concentrations of estrone (E1), estradiol (E2), estriol (E3), estetrol (E4), daidzein (DDZ), genistein (GEN) and bisphenol A (BPA) in thirty pregnant women using ultra-performance liquid chromatography coupled with tandem mass spectrometry detection (UPLC-MS/MS) and electrospray ionization (ESI). Serum E1, E2, and E3 concentrations varied significantlymore » (coefficients of variation 9–10%) with broad ranges across the cohort: 1.61–85.1 nM, 9.09–69.7 nM, and 1.5–36.3 nM respectively. BPA (undetected, estimated from total exposure), DDZ and GEN concentrations were 1-5 orders of magnitude lower. The 24-h urinary elimination profiles of endogenous estrogens were each strongly correlated with their corresponding serum concentrations (Pearson's Correlation Coefficients of 0.83 (E1), 0.84 (E2) and 0.94 (E3)). Lastly, a multivariate regression analysis produced equations for estimating serum concentrations of E1, E2, E3, E4, GEN and DDZ from urinary elimination rates and gestation period, an important step towards non-invasive biomonitoring for assessment of “added” estrogenicity during pregnancy.« less

  20. Comparative estrogenicity of endogenous, environmental and dietary estrogens in pregnant women I: Serum levels, variability and the basis for urinary biomonitoring of serum estrogenicity

    DOE PAGES

    Fleck, Stefanie C.; Twaddle, Nathan C.; Churchwell, Mona I.; ...

    2018-03-13

    Biomonitoring of human exposure to estrogens most frequently focuses on environmental and dietary estrogens, and infrequently includes measures of exposure to potent endogenous estrogens present in serum. Pregnancy is a developmentally sensitive period during which “added” serum estrogenicity exceeding normal intra-individual daily variability may be of particular relevance. Here, we made repeated measurements of serum concentrations of estrone (E1), estradiol (E2), estriol (E3), estetrol (E4), daidzein (DDZ), genistein (GEN) and bisphenol A (BPA) in thirty pregnant women using ultra-performance liquid chromatography coupled with tandem mass spectrometry detection (UPLC-MS/MS) and electrospray ionization (ESI). Serum E1, E2, and E3 concentrations varied significantlymore » (coefficients of variation 9–10%) with broad ranges across the cohort: 1.61–85.1 nM, 9.09–69.7 nM, and 1.5–36.3 nM respectively. BPA (undetected, estimated from total exposure), DDZ and GEN concentrations were 1-5 orders of magnitude lower. The 24-h urinary elimination profiles of endogenous estrogens were each strongly correlated with their corresponding serum concentrations (Pearson's Correlation Coefficients of 0.83 (E1), 0.84 (E2) and 0.94 (E3)). Lastly, a multivariate regression analysis produced equations for estimating serum concentrations of E1, E2, E3, E4, GEN and DDZ from urinary elimination rates and gestation period, an important step towards non-invasive biomonitoring for assessment of “added” estrogenicity during pregnancy.« less

  1. A novel free ammonia based pretreatment technology to enhance anaerobic methane production from primary sludge.

    PubMed

    Wei, Wei; Zhou, Xu; Xie, Guo-Jun; Duan, Haoran; Wang, Qilin

    2017-10-01

    This study proposed a novel free ammonia (FA, i.e., NH 3 ) pretreatment technology to enhance anaerobic methane production from primary sludge for the first time. The solubilization of primary sludge was substantially enhanced following 24 h FA pretreatment (250-680 mg NH 3 -N/L), by which the release of soluble chemical oxygen demand (SCOD) (i.e., 0.4 mg SCOD/mg VS added; VS: volatile solids) was approximately 10 times as much as that without pretreatment (i.e., 0.03 mg SCOD/mg VS added). Then, biochemical methane potential (BMP) tests demonstrated that FA pretreatment of 250-680 mg NH 3 -N/L was capable of enhancing anaerobic methane production while the digestion time was more than 7 days. Model based analysis indicated that the improved anaerobic methane production was due to an increased biochemical methane potential (B 0 ) of 8-17% (i.e., from 331 to 357-387 L CH 4 /kg VS added), with the highest B 0 achieved at 420 mg NH 3 -N/L pretreatment. However, FA pretreatment of 250-680 mg NH 3 -N/L decreased hydrolysis rate (k) by 24-38% compared with control (i.e., from 0.29 d -1 to 0.18-0.22 d -1 ), which explained the lower methane production over the first 7 days' digestion period. Economic analysis and environmental evaluation demonstrated that FA pretreatment technology was environmentally friendly and economically favorable. Biotechnol. Bioeng. 2017;114: 2245-2252. © 2017 Wiley Periodicals, Inc. © 2017 Wiley Periodicals, Inc.

  2. Shock and Vibration Symposium (59th) Held in Albuquerque, New Mexico on 18-20 October 1988. Volume 3

    DTIC Science & Technology

    1988-10-01

    N. F. Rieger Statistical Energy Analysis : An Overview of Its Development and Engineering Applications J. E. Manning DATA BASES DOE/DOD Environmental...Vibroacoustic Response Using the Finite Element Method and Statistical Energy Analysis F. L. Gloyna Study of Helium Effect on Spacecraft Random Vibration...Analysis S. A. Wilkerson vi DYNAMIC ANALYSIS Modeling of Vibration Transmission in a Damped Beam Structure Using Statistical Energy Analysis S. S

  3. Transitions during cephalopod life history: the role of habitat, environment, functional morphology and behaviour.

    PubMed

    Robin, Jean-Paul; Roberts, Michael; Zeidberg, Lou; Bloor, Isobel; Rodriguez, Almendra; Briceño, Felipe; Downey, Nicola; Mascaró, Maite; Navarro, Mike; Guerra, Angel; Hofmeister, Jennifer; Barcellos, Diogo D; Lourenço, Silvia A P; Roper, Clyde F E; Moltschaniwskyj, Natalie A; Green, Corey P; Mather, Jennifer

    2014-01-01

    Cephalopod life cycles generally share a set of stages that take place in different habitats and are adapted to specific, though variable, environmental conditions. Throughout the lifespan, individuals undertake a series of brief transitions from one stage to the next. Four transitions were identified: fertilisation of eggs to their release from the female (1), from eggs to paralarvae (2), from paralarvae to subadults (3) and from subadults to adults (4). An analysis of each transition identified that the changes can be radical (i.e. involving a range of morphological, physiological and behavioural phenomena and shifts in habitats) and critical (i.e. depending on environmental conditions essential for cohort survival). This analysis underlines that transitions from eggs to paralarvae (2) and from paralarvae to subadults (3) present major risk of mortality, while changes in the other transitions can have evolutionary significance. This synthesis suggests that more accurate evaluation of the sensitivity of cephalopod populations to environmental variation could be achieved by taking into account the ontogeny of the organisms. The comparison of most described species advocates for studies linking development and ecology in this particular group. © 2014 Elsevier Ltd All rights reserved.

  4. An environmental analysis of options for utilising wasted food and food residue.

    PubMed

    Oldfield, Thomas L; White, Eoin; Holden, Nicholas M

    2016-12-01

    The potential environmental impact of wasted food minimisation versus its utilisation in a circular bioeconomy is investigated based on a case study of Ireland. The amount of wasted food and food residue (WFFR) produced in 2010 was used for business-as-usual, (a) and four management options were assessed, (b) minimisation, (c) composting, (d) anaerobic digestion and (e) incineration. The environmental impacts Global Warming Potential (GWP), Acidification Potential (AP) and Eutrophication Potential (EP) were considered. A carbon return on investment (CRoI) was calculated for the three processing technologies (c-e). The results showed that a minimisation strategy for wasted food would result in the greatest reduction of all three impacts, -4.5 Mt CO 2 -e (GWP), -11.4 kt PO 4 3 -e (EP) and -43.9 kt SO 2 -e (AP) compared to business as usual. For WFFR utilisation in the circular bioeconomy, anaerobic digestion resulted in the lowest environmental impact and best CRoI of -0.84 kg CO 2 -e per Euro. From an economic perspective, for minimisation to be beneficial, 0.15 kg of wasted food would need to be reduced per Euro spent. Copyright © 2016 Elsevier Ltd. All rights reserved.

  5. 31 CFR 26.5 - Upgrades and additional environmental information.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ..., such environmental information from the MDB (e.g., environmental chapters from project feasibility studies or environmental data sheets) which contains this environmental analysis. The MDB Office will...

  6. GENOMIC ANALYSIS OF SURROGATE TISSUES FOR ASSESSING ENVIRONMENTAL EXPOSURES AND FUTURE DISEASE STATES

    EPA Science Inventory

    Genomic Analysis of Surrogate Tissues for Assessing Environmental Exposures and Future Disease States

    John C. Rockett, Chad R. Blystone, Amber K. Goetz, Rachel N. Murrell, Hongzu Ren, Judith E. Schmid, Jessica Stapelfeldt, Lillian F. Strader, Kary E. Thompson, Douglas B. T...

  7. Integrated sampling and analysis unit for the determination of sexual pheromones in environmental air using fabric phase sorptive extraction and headspace-gas chromatography-mass spectrometry.

    PubMed

    Alcudia-León, M Carmen; Lucena, Rafael; Cárdenas, Soledad; Valcárcel, Miguel; Kabir, Abuzar; Furton, Kenneth G

    2017-03-10

    This article presents a novel unit that integrates for the first time air sampling and preconcentration based on the use of fabric phase sorptive extraction principles. The determination of Tuta absoluta sexual pheromone traces in environmental air has been selected as analytical problem. For this aim, a novel laboratory-built unit made up of commercial brass elements as holder of the sol-gel coated fabric extracting phase has been designed and optimized. The performance of the integrated unit was evaluated analyzing environmental air sampled in tomato crops. The unit can work under sampling and analysis mode which eliminates any need for sorptive phase manipulation prior to instrumental analysis. In the sampling mode, the unit can be connected to a sampling pump to pass the air through the sorptive phase at a controlled flow-rate. In the analysis mode, it is placed in the gas chromatograph autosampler without any instrumental modification. It also diminishes the risk of cross contamination between sampling and analysis. The performance of the new unit has been evaluated using the main components of the sexual pheromone of Tuta absoluta [(3E,8Z,11Z)-tetradecatrien-1-yl acetate and (3E,8Z)-tetradecadien-1-yl acetate] as model analytes. The limits of detection for both compounds resulted to be 1.6μg and 0.8μg, respectively, while the precision (expressed as relative standard deviation) was better than 3.7%. Finally, the unit has been deployed in the field to analyze a number of real life samples, some of them were found positive. Copyright © 2017 Elsevier B.V. All rights reserved.

  8. Environmental impact of heavy pig production in a sample of Italian farms. A cradle to farm-gate analysis.

    PubMed

    Pirlo, G; Carè, S; Casa, G Della; Marchetti, R; Ponzoni, G; Faeti, V; Fantin, V; Masoni, P; Buttol, P; Zerbinatti, L; Falconi, F

    2016-09-15

    Four breeding piggeries and eight growing-fattening piggeries were analyzed to estimate potential environmental impacts of heavy pig production (>160kg of live height at slaughtering). Life Cycle Assessment methodology was adopted in the study, considering a system from breeding phase to growing fattening phase. Environmental impacts of breeding phase and growing-fattening phase were accounted separately and then combined to obtain the impacts of heavy pig production. The functional unit was 1kg of live weight gain. Impact categories investigated were global warming (GW), acidification (AC), eutrophication (EU), abiotic depletion (AD), and photochemical ozone formation (PO). The total environmental impact of 1kg of live weight gain was 3.3kg CO2eq, 4.9E-2kg SO2eq, 3.1E-2kg PO4(3-)eq, 3.7E-3kg Sbeq, 1.7E-3kg C2H4eq for GW, AC, EU, AD, and PO respectively. Feed production was the main hotspot in all impact categories. Greenhouse gases responsible for GW were mainly CH4, N2O, and CO2. Ammonia was the most important source of AC, sharing about 90%. Nitrate and NH3 were the main emissions responsible for EU, whereas P and NOx showed minor contributions. Crude oil and natural gas consumption was the main source of AD. A large spectrum of pollutants had a significant impact on PO: they comprised CH4 from manure fermentation, CO2 caused by fossil fuel combustion in agricultural operations and industrial processes, ethane and propene emitted during oil extraction and refining, and hexane used in soybean oil extraction. The farm characteristics that best explained the results were fundamentally connected with performance indicators Farms showed a wide variability of results, meaning that there was wide margin for improving the environmental performance of either breeding or growing-fattening farms. The effectiveness of some mitigation measures was evaluated and the results that could be obtained by their introduction have been presented. Copyright © 2016 Elsevier B.V. All rights reserved.

  9. Environmental Guide for ASW in Eastern Canadian Shallow Waters. Part 2: Environmental Data

    DTIC Science & Technology

    1991-01-01

    current parallel to the isobaths with speeds o046 an s-’ and 18 cma-s’ at 110 m and 380 m respectivei is also present. Part of this current flows...ALMA A \\ \\\\ SL. ICI Figure 4.25: Ocean Feature Analysis for a) April, b) May and c) June. CýOntomjr show boundaries of the water mAsaes and diilts in...Cu~rmTv 4 3 Sea Sqwf& meperatuxe 1 4 3 1 RoD-Aca Dvewnpi o3 432 DasProdueu~ 44 Waer ) Masa . &ad FrocAs 4 4 1 Wau, !.Lm Du~nbqiiam 4 42 F1’E1I

  10. 75 FR 65620 - Inglis Hydropower, LLC; Notice of Application Ready for Environmental Analysis and Soliciting...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-10-26

    ... Hydropower, LLC; Notice of Application Ready for Environmental Analysis and Soliciting Comments...: Inglis Hydropower, LLC. e. Name of Project: Inglis Hydropower Project. f. Location: The project would be... ready for environmental analysis at this time. l. The proposed 2.0-megawatt Inglis Hydropower Project...

  11. Life cycle assessment of fuel ethanol derived from corn grain via dry milling.

    PubMed

    Kim, Seungdo; Dale, Bruce E

    2008-08-01

    Life cycle analysis enables to investigate environmental performance of fuel ethanol used in an E10 fueled compact passenger vehicle. Ethanol is derived from corn grain via dry milling. This type of analysis is an important component for identifying practices that will help to ensure that a renewable fuel, such as ethanol, may be produced in a sustainable manner. Based on data from eight counties in seven Corn Belt states as corn farming sites, we show ethanol derived from corn grain as E10 fuel would reduce nonrenewable energy and greenhouse gas emissions, but would increase acidification, eutrophication and photochemical smog, compared to using gasoline as liquid fuel. The ethanol fuel systems considered in this study offer economic benefits, namely more money returned to society than the investment for producing ethanol. The environmental performance of ethanol fuel system varies significantly with corn farming sites because of different crop management practices, soil properties, and climatic conditions. The dominant factor determining most environmental impacts considered here (i.e., greenhouse gas emissions, acidification, eutrophication, and photochemical smog formation) is soil related nitrogen losses (e.g., N2O, NOx, and NO3-). The sources of soil nitrogen include nitrogen fertilizer, crop residues, and air deposition. Nitrogen fertilizer is probably the primary source. Simulations using an agro-ecosystem model predict that planting winter cover crops would reduce soil nitrogen losses and increase soil organic carbon levels, thereby greatly improving the environmental performance of the ethanol fuel system.

  12. Scenario Analysis: An Integrative Study and Guide to Implementation in the United States Air Force

    DTIC Science & Technology

    1994-09-01

    Environmental Analysis ................................ 3-3 Classifications of Environments ......................... 3-5 Characteristics of... Environments ........................ 3-8 iii Page Components of the Environmental Analysis Process ........... 3-12 Forecasting... Environmental Analysis ...................... 3-4 3-2 Model of the Industry Environment ......................... 3-6 3-3 Model of Macroenvironment

  13. Perceptions of the Concerned Reader: An Analysis of the Subscribers of E/The Environmental Magazine.

    ERIC Educational Resources Information Center

    Labbe, Colleen P.; Fortner, Rosanne W.

    2001-01-01

    Describes a study aimed at determining if 'E/The Environmental Magazine' has met two goals: (1) its subscribers' need for environmental information and (2) its publishers' goal of inspiring environmentally responsible behavior. Results indicate that the level of the magazine's influence varied according to the reader's behavior category.…

  14. 43 CFR 3425.3 - Environmental analysis.

    Code of Federal Regulations, 2011 CFR

    2011-10-01

    ... 43 Public Lands: Interior 2 2011-10-01 2011-10-01 false Environmental analysis. 3425.3 Section... § 3425.3 Environmental analysis. (a) Before a lease sale may be held under this subpart, the authorized officer shall prepare an environmental assessment or environmental impact statement of the proposed lease...

  15. ANALYSIS OF CONCORDANCE OF PROBABILISTIC AGGREGATE EXPOSURE PREDICTIONS WITH OBSERVED BIOMONITORING RESULTS: AN EXAMPLE USING CTEPP DATA

    EPA Science Inventory

    Three key areas of scientific inquiry in the study of human exposure to environmental contaminants are 1) assessment of aggregate (i.e., multi-pathway, multi-route) exposures, 2) application of probabilistic methods to exposure prediction, and 3) the interpretation of biomarker m...

  16. Behavioral responses of beluga whales (Delphinapterus leucas) to environmental variation in an Arctic estuary.

    PubMed

    Anderson, Paul A; Poe, Russell B; Thompson, Laura A; Weber, Nansen; Romano, Tracy A

    2017-12-01

    Some Arctic estuaries serve as substrate rubbing sites for beluga whales (Delphinapterus leucas) in the summer, representing a specialized resource for the species. Understanding how environmental variation affects the species' behavior is essential to management of these habitats in coming years as the climate changes. Spatiotemporal and environmental variables were recorded for behavioral observations, during which focal groups of whales in an estuary were video-recorded for enumeration and behavioral analysis. Multiple polynomial linear regression models were optimized to identify the effects of spatiotemporal and environmental conditions on group size, composition, and the frequency of behaviors being performed. Results suggest that belugas take advantage of environmental variation to express behaviors that 1) protect young, e.g., bringing calves close to shore during cloudier days, obscuring visualization from terrestrial predators; 2) avoid predation, e.g., rubbing against substrates at higher Beaufort sea states to obscure visualization, and resting during low tides while swimming on outgoing tides to avoid stranding; and 3) optimize bioenergetic resources, e.g., swimming during lower Beaufort sea states and clearer days. Predictive models like the ones presented in this study can inform conservation management strategies as environmental conditions change in future years. Copyright © 2017 Elsevier B.V. All rights reserved.

  17. 3D chemical mapping: application of scanning transmission (soft) X-ray microscopy (STXM) in combination with angle-scan tomography in bio-, geo-, and environmental sciences.

    PubMed

    Obst, Martin; Schmid, Gregor

    2014-01-01

    The identification of environmental processes and mechanisms often requires information on the organochemical and inorganic composition of specimens at high spatial resolution. X-ray spectroscopy (XAS) performed in the soft X-ray range (100-2,200 eV) provides chemical speciation information for elements that are of high biogeochemical relevance such as carbon, nitrogen, and oxygen but also includes transition metals such as iron, manganese, or nickel. Synchrotron-based scanning transmission X-ray microscopy (STXM) combines XAS with high resolution mapping on the 20-nm scale. This provides two-dimensional (2D) quantitative information about the distribution of chemical species such as organic macromolecules, metals, or mineral phases within environmental samples. Furthermore, the combination of STXM with angle-scan tomography allows for three-dimensional (3D) spectromicroscopic analysis of bio-, geo-, or environmental samples. For the acquisition of STXM tomography data, the sample is rotated around an axis perpendicular to the X-ray beam. Various sample preparation approaches such as stripes cut from TEM grids or the preparation of wet cells allow for preparing environmentally relevant specimens in a dry or in a fully hydrated state for 2D and 3D STXM measurements. In this chapter we give a short overview about the principles of STXM, its application to environmental sciences, different preparation techniques, and the analysis and 3D reconstruction of STXM tomography data.

  18. Transportation impact analysis gets a failing grade when it comes to climate change and smart growth

    DOT National Transportation Integrated Search

    2008-12-01

    Transportation impact analysis performed to comply with environmental impact laws (i.e., the : California Environmental Quality Act or the National Environmental Policy Act) often focuses : on only one perspective about potential impacts. That perspe...

  19. 43 CFR 3430.3-2 - Environmental analysis.

    Code of Federal Regulations, 2011 CFR

    2011-10-01

    ... 43 Public Lands: Interior 2 2011-10-01 2011-10-01 false Environmental analysis. 3430.3-2 Section... Leases § 3430.3-2 Environmental analysis. (a) After the applicant has completed the initial showing required under § 3430.2 of this title, the authorized officer shall conduct an environmental analysis of...

  20. Methods to maximise recovery of environmental DNA from water samples.

    PubMed

    Hinlo, Rheyda; Gleeson, Dianne; Lintermans, Mark; Furlan, Elise

    2017-01-01

    The environmental DNA (eDNA) method is a detection technique that is rapidly gaining credibility as a sensitive tool useful in the surveillance and monitoring of invasive and threatened species. Because eDNA analysis often deals with small quantities of short and degraded DNA fragments, methods that maximize eDNA recovery are required to increase detectability. In this study, we performed experiments at different stages of the eDNA analysis to show which combinations of methods give the best recovery rate for eDNA. Using Oriental weatherloach (Misgurnus anguillicaudatus) as a study species, we show that various combinations of DNA capture, preservation and extraction methods can significantly affect DNA yield. Filtration using cellulose nitrate filter paper preserved in ethanol or stored in a -20°C freezer and extracted with the Qiagen DNeasy kit outperformed other combinations in terms of cost and efficiency of DNA recovery. Our results support the recommendation to filter water samples within 24hours but if this is not possible, our results suggest that refrigeration may be a better option than freezing for short-term storage (i.e., 3-5 days). This information is useful in designing eDNA detection of low-density invasive or threatened species, where small variations in DNA recovery can signify the difference between detection success or failure.

  1. Exploring the Potential of a Global Emerging Contaminant Early Warning Network through the Use of Retrospective Suspect Screening with High-Resolution Mass Spectrometry.

    PubMed

    Alygizakis, Nikiforos A; Samanipour, Saer; Hollender, Juliane; Ibáñez, María; Kaserzon, Sarit; Kokkali, Varvara; van Leerdam, Jan A; Mueller, Jochen F; Pijnappels, Martijn; Reid, Malcolm J; Schymanski, Emma L; Slobodnik, Jaroslav; Thomaidis, Nikolaos S; Thomas, Kevin V

    2018-05-01

    A key challenge in the environmental and exposure sciences is to establish experimental evidence of the role of chemical exposure in human and environmental systems. High resolution and accurate tandem mass spectrometry (HRMS) is increasingly being used for the analysis of environmental samples. One lauded benefit of HRMS is the possibility to retrospectively process data for (previously omitted) compounds that has led to the archiving of HRMS data. Archived HRMS data affords the possibility of exploiting historical data to rapidly and effectively establish the temporal and spatial occurrence of newly identified contaminants through retrospective suspect screening. We propose to establish a global emerging contaminant early warning network to rapidly assess the spatial and temporal distribution of contaminants of emerging concern in environmental samples through performing retrospective analysis on HRMS data. The effectiveness of such a network is demonstrated through a pilot study, where eight reference laboratories with available archived HRMS data retrospectively screened data acquired from aqueous environmental samples collected in 14 countries on 3 different continents. The widespread spatial occurrence of several surfactants (e.g., polyethylene glycols ( PEGs ) and C12AEO-PEGs ), transformation products of selected drugs (e.g., gabapentin-lactam, metoprolol-acid, carbamazepine-10-hydroxy, omeprazole-4-hydroxy-sulfide, and 2-benzothiazole-sulfonic-acid), and industrial chemicals (3-nitrobenzenesulfonate and bisphenol-S) was revealed. Obtaining identifications of increased reliability through retrospective suspect screening is challenging, and recommendations for dealing with issues such as broad chromatographic peaks, data acquisition, and sensitivity are provided.

  2. CPROB: A COMPUTATIONAL TOOL FOR CONDUCTING CONDITIONAL PROBABILITY ANALYSIS

    EPA Science Inventory

    Conditional probability analysis measures the probability of observing one event given that another event has occurred. In an environmental context, conditional probability analysis helps assess the association between an environmental contaminant (i.e. the stressor) and the ec...

  3. 28 CFR 91.62 - Preparing an Environmental Assessment.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... environmental analysis. Any state or local environmental impact review requirements should also be incorporated... laws and regulations as well as similar state and local environmental impact review requirements. (e... FACILITIES Environmental Impact Review Procedures for VOI/TIS Grant Program Environmental Review Procedures...

  4. Vibration-based structural health monitoring using adaptive statistical method under varying environmental condition

    NASA Astrophysics Data System (ADS)

    Jin, Seung-Seop; Jung, Hyung-Jo

    2014-03-01

    It is well known that the dynamic properties of a structure such as natural frequencies depend not only on damage but also on environmental condition (e.g., temperature). The variation in dynamic characteristics of a structure due to environmental condition may mask damage of the structure. Without taking the change of environmental condition into account, false-positive or false-negative damage diagnosis may occur so that structural health monitoring becomes unreliable. In order to address this problem, an approach to construct a regression model based on structural responses considering environmental factors has been usually used by many researchers. The key to success of this approach is the formulation between the input and output variables of the regression model to take into account the environmental variations. However, it is quite challenging to determine proper environmental variables and measurement locations in advance for fully representing the relationship between the structural responses and the environmental variations. One alternative (i.e., novelty detection) is to remove the variations caused by environmental factors from the structural responses by using multivariate statistical analysis (e.g., principal component analysis (PCA), factor analysis, etc.). The success of this method is deeply depending on the accuracy of the description of normal condition. Generally, there is no prior information on normal condition during data acquisition, so that the normal condition is determined by subjective perspective with human-intervention. The proposed method is a novel adaptive multivariate statistical analysis for monitoring of structural damage detection under environmental change. One advantage of this method is the ability of a generative learning to capture the intrinsic characteristics of the normal condition. The proposed method is tested on numerically simulated data for a range of noise in measurement under environmental variation. A comparative study with conventional methods (i.e., fixed reference scheme) demonstrates the superior performance of the proposed method for structural damage detection.

  5. Analysis of the Phoenix Mission's Thermal and Electrical Conductivity Probe (TECP) Relative Humidity Data

    NASA Astrophysics Data System (ADS)

    Fischer, E.; Martinez, G.; Renno, N. O.; Tamppari, L.; Zent, A.

    2015-12-01

    With funding from NASA's Mars Data Analysis Program, we plan to enhance the scientific return of the Phoenix mission by producing and archiving high-level relative humidity (RH) data from the measurements made by the Thermal and Electrical Conductivity Probe (TECP). Values of temperature and RH covered in the pre-flight calibration [1] overlap only partially with the environmental conditions found at the Phoenix landing site [2,3]. In particular, there is no overlap at dawn, when temperatures are the lowest and the expected RH is the highest [4] and in the middle of the day, when temperatures are relatively high and the expected RH is very low [5]. Here we plan to produce high-level RH data by calibrating an Engineering Model of the TECP in the Michigan Mars Environmental Chamber (MMEC). The MMEC is capable of simulating the entire range of environmental conditions found at the Phoenix landing site. The MMEC is a cylindrical chamber with internal diameter of 64 cm and length of 160 cm. It is capable of simulating temperatures ranging from 145 to 500 K, CO2 pressures ranging from 10 to 105 Pa, and relative humidity ranging from nearly 0 to 100% [6]. The analysis of high-level RH data has the potential to shed light on the formation of liquid brines at Mars' polar latitudes, where it is most likely to occur [7]. In addition, the RH sensor aboard Curiosity is similar to that on the TECP [8], allowing a direct comparison of the near-surface RH measurements at these two different locations on the surface of Mars. REFERENCES: [1] Zent, A. P., et al, 2009, JGR (1991-2012) 114.E3. [2] Tamppari, L. K., et al. 2010, JGR, 115, E00E17. [3] Davy, R., et al., 2010, JGR, 115, E00E13. [4] Whiteway, J., et al., 2009, Science, 325, 68-70. [5] Savijärvi, H., and A. Määttänen, 2010, Q. J. R. Meteorol. Soc., 136, 1497-1505. [6] Fischer, E., et al., 2014, GRL, 41, 4456-4462. [7] Martínez, G., and Rennó, N., 2013, Space Sci. Rev., 175, 29-51. [8] Harri, A-M., et al., 2014, JGR 119.9: 2132-2147.

  6. The relationship between corporate environmental performance and environmental disclosure: an empirical study in China.

    PubMed

    Meng, X H; Zeng, S X; Shi, Jonathan J; Qi, G Y; Zhang, Z B

    2014-12-01

    Based on a content analysis of 533 Chinese listed companies, this study examines how corporate environmental performance affects not only the level of detail of a company's environmental disclosures, but also what information is disclosed. The results show that (1) both poor and good performers have more disclosure than the median (i.e., "mixed") performers, which provides empirical evidence to support a nonlinear relationship between corporate environmental performance and environmental disclosure; (2) poor performers disclose more soft information on environmental performance than good performers, and good performers disclose more solid information; and (3) although poor performers increase disclosure after being exposed as environmental violators, they avoid disclosing negative environmental information, such as the violation and the associated penalties. This study provides additional evidence for a nonlinear relationship between environmental performance and disclosure in emerging markets, and suggests environmental disclosure may not be a valid signal to differentiate good performers from poor performers in contemporary China. Copyright © 2014 Elsevier Ltd. All rights reserved.

  7. Genetic differentiation in Elaeocarpus photiniifolia (Elaeocarpaceae) associated with geographic distribution and habitat variation in the Bonin (Ogasawara) Islands.

    PubMed

    Sugai, Kyoko; Setsuko, Suzuki; Nagamitsu, Teruyoshi; Murakami, Noriaki; Kato, Hidetoshi; Yoshimaru, Hiroshi

    2013-11-01

    Gene flow between populations in different environmental conditions can be limited due to divergent natural selection, thus promoting genetic differentiation. Elaeocarpus photiniifolia, an endemic tree species in the Bonin Islands, is distributed in two types of habitats, dry scrubs and mesic forests. We aim to elucidate the genetic differentiation in E. photiniifolia within and between islands and between the habitat types. We investigated genotypes of 639 individuals from 19 populations of E. photiniifolia and its closely-related E. sylvestris at 24 microsatellite loci derived from expressed sequence tags. The data revealed genetic differentiation (1) between E. photiniifolia and E. sylvestris (0.307 ≤ F ST ≤ 0.470), (2) between the E. photiniifolia populations of the Chichijima and Hahajima Island Groups in the Bonin Islands (0.033 ≤ F ST ≤ 0.121) and (3) between E. photiniifolia populations associated with dry scrubs and mesic forests in the Chichijima Island Group (0.005 ≤ F ST ≤ 0.071). Principal coordinate analysis and Bayesian clustering analysis also showed that genetically distinct groups were associated with the habitat types, and isolation by distance was not responsible for the genetic differentiation. These findings suggest that E. photiniifolia is divided into genetically differentiated groups associated with different environmental conditions in the Bonin Islands.

  8. Combining Genotype, Phenotype, and Environment to Infer Potential Candidate Genes.

    PubMed

    Talbot, Benoit; Chen, Ting-Wen; Zimmerman, Shawna; Joost, Stéphane; Eckert, Andrew J; Crow, Taylor M; Semizer-Cuming, Devrim; Seshadri, Chitra; Manel, Stéphanie

    2017-03-01

    Population genomic analysis can be an important tool in understanding local adaptation. Identification of potential adaptive loci in such analyses is usually based on the survey of a large genomic dataset in combination with environmental variables. Phenotypic data are less commonly incorporated into such studies, although combining a genome scan analysis with a phenotypic trait analysis can greatly improve the insights obtained from each analysis individually. Here, we aimed to identify loci potentially involved in adaptation to climate in 283 Loblolly pine (Pinus taeda) samples from throughout the species' range in the southeastern United States. We analyzed associations between phenotypic, molecular, and environmental variables from datasets of 3082 single nucleotide polymorphism (SNP) loci and 3 categories of phenotypic traits (gene expression, metabolites, and whole-plant traits). We found only 6 SNP loci that displayed potential signals of local adaptation. Five of the 6 identified SNPs are linked to gene expression traits for lignin development, and 1 is linked with whole-plant traits. We subsequently compared the 6 candidate genes with environmental variables and found a high correlation in only 3 of them (R2 > 0.2). Our study highlights the need for a combination of genotypes, phenotypes, and environmental variables, and for an appropriate sampling scheme and study design, to improve confidence in the identification of potential candidate genes. © The American Genetic Association 2016. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

  9. Comparative assessment of the environmental sustainability of existing and emerging perchlorate treatment technologies for drinking water.

    PubMed

    Choe, Jong Kwon; Mehnert, Michelle H; Guest, Jeremy S; Strathmann, Timothy J; Werth, Charles J

    2013-05-07

    Environmental impacts of conventional and emerging perchlorate drinking water treatment technologies were assessed using life cycle assessment (LCA). Comparison of two ion exchange (IX) technologies (i.e., nonselective IX with periodic regeneration using brines and perchlorate-selective IX without regeneration) at an existing plant shows that brine is the dominant contributor for nonselective IX, which shows higher impact than perchlorate-selective IX. Resource consumption during the operational phase comprises >80% of the total impacts. Having identified consumables as the driving force behind environmental impacts, the relative environmental sustainability of IX, biological treatment, and catalytic reduction technologies are compared more generally using consumable inputs. The analysis indicates that the environmental impacts of heterotrophic biological treatment are 2-5 times more sensitive to influent conditions (i.e., nitrate/oxygen concentration) and are 3-14 times higher compared to IX. However, autotrophic biological treatment is most environmentally beneficial among all. Catalytic treatment using carbon-supported Re-Pd has a higher (ca. 4600 times) impact than others, but is within 0.9-30 times the impact of IX with a newly developed ligand-complexed Re-Pd catalyst formulation. This suggests catalytic reduction can be competitive with increased activity. Our assessment shows that while IX is an environmentally competitive, emerging technologies also show great promise from an environmental sustainability perspective.

  10. Fecal indicator bacteria along multiple environmental transmission pathways (water, hands, food, soil, flies) and subsequent child diarrhea in rural Bangladesh.

    PubMed

    Pickering, Amy J; Ercumen, Ayse; Arnold, Benjamin F; Kwong, Laura H; Parvez, Sarker Masud; Alam, Mahfuja; Sen, Debashis; Islam, Sharmin; Kullmann, Craig; Chase, Claire; Ahmed, Rokeya; Unicomb, Leanne; Colford, John M; Luby, Stephen P

    2018-06-14

    Enteric pathogens can be transmitted through multiple environmental pathways, yet little is known about the relative contribution of each pathway to diarrhea risk among children. We aimed to identify fecal transmission pathways in the household environment associated with prospectively measured child diarrhea in rural Bangladesh. We measured the presence and levels of E. coli in tubewells, stored drinking water, pond water, child hand rinses, courtyard soil, flies, and food in 1843 households. Gastrointestinal symptoms among children ages 0-60 months were recorded concurrently at the time of environmental sample collection and again a median of 6 days later. Incident diarrhea (3 or more loose stools in a 24-hr period) was positively associated with the concentration of E. coli on child hands measured on the first visit (incidence rate ratio [IRR]=1.23, 95% CI 1.06, 1.43 for a log10 increase), while other pathways were not associated. In cross-sectional analysis, there were no associations between concurrently measured environmental contamination and diarrhea. Our findings suggest higher levels of E. coli on child hands are strongly associated with subsequent diarrheal illness rates among children in rural Bangladesh.

  11. Development of Environmental Profiles for Testing Equipment Installed in Naval Aircraft (Fixed Wing).

    DTIC Science & Technology

    1979-02-01

    A 0 ’A099 7 1 3 tAU N A E R O S P A C E C O R P B E T H P A G E N Y F / 6 ~ ~ i DEVELOPMENT OF ENVIRONMENTAL. PROFILES FOR TESTING EQUIPMENT...IHIlia- ’ -Q IIIII.L25 MICROCOPY RESOLUTION’ TEST CHART C RMS-9-R-1 DEVELOPMENT OF ENVIRONMENTAL PROFILES FOR TESTING EQUIPMENT INSTALLED IN NAVAL... Development of Environmental Profiles for Testing ,’~ Final j quipment Installed in Naval Aircraft (Fixed Wing), e 7- e* 8 S. PERFORMING ORGANIZATION

  12. Functional identification of MdSIZ1 as a SUMO E3 ligase in apple.

    PubMed

    Zhang, Rui-Fen; Guo, Ying; Li, Yuan-Yuan; Zhou, Li-Jie; Hao, Yu-Jin; You, Chun-Xiang

    2016-07-01

    SUMOylation, the conjugation of target proteins with SUMO (small ubiquitin-related modifier), is a type of post-translational modification in eukaryotes and involves the sequential action of activation (E1), conjugation (E2) and ligation (E3) enzymes. In Arabidopsis, the AtSIZ1 protein is a SUMO E3 ligase that promotes the conjugation of SUMO proteins to target substrates. Here, we isolated and identified a SUMO E3 ligase, MdSIZ1, in apple, which was similar to AtSIZ1. SUMOylation analysis showed that MdSIZ1 had SUMO E3 ligase activity in vitro and in vivo. SUMO conjugation was increased by high temperatures, low temperatures, and abscisic acid (ABA). The ectopic expression of MdSIZ1 in Arabidopsis siz1-2 mutant plants partially complemented the morphological mutant phenotype and enhanced the levels of SUMO conjugation. Taken together, these results suggest that MdSIZ1-mediated SUMO conjugation of target proteins is an important process that regulates the adaptation of apple plants to various environmental stresses. Copyright © 2016 Elsevier GmbH. All rights reserved.

  13. Environmental engineering education for developing countries: framework for the future.

    PubMed

    Ujang, Z; Henze, M; Curtis, T; Schertenleib, R; Beal, L L

    2004-01-01

    This paper presents the existing philosophy, approach, criteria and delivery of environmental engineering education (E3) for developing countries. In general, environmental engineering is being taught in almost all major universities in developing countries, mostly under civil engineering degree programmes. There is an urgent need to address specific inputs that are particularly important for developing countries with respect to the reality of urbanisation and industrialisation. The main component of E3 in the near future will remain on basic sanitation in most developing countries, with special emphasis on the consumer-demand approach. In order to substantially overcome environmental problems in developing countries, E3 should include integrated urban water management, sustainable sanitation, appropriate technology, cleaner production, wastewater minimisation and financial framework.

  14. Caspian Sea Environmental Security Game: 16-17 November 1998

    DTIC Science & Technology

    1999-07-01

    17 Robert E. Ebel Caspian Basin Oil and Gas: An Overview . . . . . . . . . . . 21 Brian R . Shaw Environmental Baseline...threat to security of supply. 32 ENVIRONMENTAL BASELINE ANALYSIS OF THE CASPIAN SEA REGION BRIAN R . SHAW TERRY PALUSZKIEWICZ SUSAN A. THOMAS...Caspian Sea level. Sources of water include runoff ( R ), precipitation (P), and groundwater flow (G); sink include evaporation (E), and discharge of water

  15. Use of a Filter Cartridge for Filtration of Water Samples and Extraction of Environmental DNA.

    PubMed

    Miya, Masaki; Minamoto, Toshifumi; Yamanaka, Hiroki; Oka, Shin-Ichiro; Sato, Keiichi; Yamamoto, Satoshi; Sado, Tetsuya; Doi, Hideyuki

    2016-11-25

    Recent studies demonstrated the use of environmental DNA (eDNA) from fishes to be appropriate as a non-invasive monitoring tool. Most of these studies employed disk fiber filters to collect eDNA from water samples, although a number of microbial studies in aquatic environments have employed filter cartridges, because the cartridge has the advantage of accommodating large water volumes and of overall ease of use. Here we provide a protocol for filtration of water samples using the filter cartridge and extraction of eDNA from the filter without having to cut open the housing. The main portions of this protocol consists of 1) filtration of water samples (water volumes ≤4 L or >4 L); (2) extraction of DNA on the filter using a roller shaker placed in a preheated incubator; and (3) purification of DNA using a commercial kit. With the use of this and previously-used protocols, we perform metabarcoding analysis of eDNA taken from a huge aquarium tank (7,500 m 3 ) with known species composition, and show the number of detected species per library from the two protocols as the representative results. This protocol has been developed for metabarcoding eDNA from fishes, but is also applicable to eDNA from other organisms.

  16. BOTULISM E IN LAKE ERIE: ECOLOGY AND LOWER FOOD WEB TRANSFER

    EPA Science Inventory

    This project will determine the environmental conditions that favor botulism Type E bacteria in Lake Erie and explore whether quagga mussels are altering bottom sediment conditions to favor C. botulinum growth. Analysis of environmental parameters, including water chemistry, alg...

  17. Environmental DNA particle size distribution from Brook Trout (Salvelinus fontinalis)

    Treesearch

    Taylor M. Wilcox; Kevin S. McKelvey; Michael K. Young; Winsor H. Lowe; Michael K. Schwartz

    2015-01-01

    Environmental DNA (eDNA) sampling has become a widespread approach for detecting aquatic animals with high potential for improving conservation biology. However, little research has been done to determine the size of particles targeted by eDNA surveys. In this study, we conduct particle distribution analysis of eDNA from a captive Brook Trout (Salvelinus fontinalis) in...

  18. Differences in environmental preferences towards cycling for transport among adults: a latent class analysis.

    PubMed

    Mertens, Lieze; Van Cauwenberg, Jelle; Ghekiere, Ariane; De Bourdeaudhuij, Ilse; Deforche, Benedicte; Van de Weghe, Nico; Van Dyck, Delfien

    2016-08-12

    Increasing cycling for transport can contribute to improve public health among adults. Micro-environmental factors (i.e. small-scaled street-setting features) may play an important role in affecting the street's appeal to cycle for transport. Understanding about the interplay between individuals and their physical environment is important to establish tailored environmental interventions. Therefore, the current study aimed to examine whether specific subgroups exist based on similarities in micro-environmental preferences to cycle for transport. Responses of 1950 middle-aged adults (45-65 years) on a series of choice tasks depicting potential cycling routes with manipulated photographs yielded three subgroups with different micro-environmental preferences using latent class analysis. Although latent class analysis revealed three different subgroups in the middle-aged adult population based on their environmental preferences, results indicated that cycle path type (i.e. a good separated cycle path) is the most important environmental factor for all participants and certainly for individuals who did not cycle for transport. Furthermore, only negligible differences were found between the importances of the other micro-environmental factors (i.e. traffic density, evenness of the cycle path, maintenance, vegetation and speed limits) regarding the two at risk subgroups and that providing a speed bump obviously has the least impact on the street's appeal to cycle for transport. Results from the current study indicate that only negligible differences were found between the three subgroups. Therefore, it might be suggested that tailored environmental interventions are not required in this research context.

  19. A global satellite environmental data record derived from AMSR-E and AMSR2 microwave Earth observations

    NASA Astrophysics Data System (ADS)

    Du, Jinyang; Kimball, John S.; Jones, Lucas A.; Kim, Youngwook; Glassy, Joseph; Watts, Jennifer D.

    2017-11-01

    Spaceborne microwave remote sensing is widely used to monitor global environmental changes for understanding hydrological, ecological, and climate processes. A new global land parameter data record (LPDR) was generated using similar calibrated, multifrequency brightness temperature (Tb) retrievals from the Advanced Microwave Scanning Radiometer for EOS (AMSR-E) and the Advanced Microwave Scanning Radiometer 2 (AMSR2). The resulting LPDR provides a long-term (June 2002-December 2015) global record of key environmental observations at a 25 km grid cell resolution, including surface fractional open water (FW) cover, atmosphere precipitable water vapor (PWV), daily maximum and minimum surface air temperatures (Tmx and Tmn), vegetation optical depth (VOD), and surface volumetric soil moisture (VSM). Global mapping of the land parameter climatology means and seasonal variability over the full-year records from AMSR-E (2003-2010) and AMSR2 (2013-2015) observation periods is consistent with characteristic global climate and vegetation patterns. Quantitative comparisons with independent observations indicated favorable LPDR performance for FW (R ≥ 0.75; RMSE ≤ 0.06), PWV (R ≥ 0.91; RMSE ≤ 4.94 mm), Tmx and Tmn (R ≥ 0.90; RMSE ≤ 3.48 °C), and VSM (0.63 ≤ R ≤ 0.84; bias-corrected RMSE ≤ 0.06 cm3 cm-3). The LPDR-derived global VOD record is also proportional to satellite-observed NDVI (GIMMS3g) seasonality (R ≥ 0.88) due to the synergy between canopy biomass structure and photosynthetic greenness. Statistical analysis shows overall LPDR consistency but with small biases between AMSR-E and AMSR2 retrievals that should be considered when evaluating long-term environmental trends. The resulting LPDR and potential updates from continuing AMSR2 operations provide for effective global monitoring of environmental parameters related to vegetation activity, terrestrial water storage, and mobility and are suitable for climate and ecosystem studies. The LPDR dataset is publicly available at http://files.ntsg.umt.edu/data/LPDR_v2/.<

  20. Associations between active trachoma and community intervention with Antibiotics, Facial cleanliness, and Environmental improvement (A,F,E).

    PubMed

    Ngondi, Jeremiah; Matthews, Fiona; Reacher, Mark; Baba, Samson; Brayne, Carol; Emerson, Paul

    2008-04-30

    Surgery, Antibiotics, Facial cleanliness and Environmental improvement (SAFE) are advocated by the World Health Organization (WHO) for trachoma control. However, few studies have evaluated the complete SAFE strategy, and of these, none have investigated the associations of Antibiotics, Facial cleanliness, and Environmental improvement (A,F,E) interventions and active trachoma. We aimed to investigate associations between active trachoma and A,F,E interventions in communities in Southern Sudan. Surveys were undertaken in four districts after 3 years of implementation of the SAFE strategy. Children aged 1-9 years were examined for trachoma and uptake of SAFE assessed through interviews and observations. Using ordinal logistic regression, associations between signs of active trachoma and A,F,E interventions were explored. Trachomatous inflammation-intense (TI) was considered more severe than trachomatous inflammation-follicular (TF). A total of 1,712 children from 25 clusters (villages) were included in the analysis. Overall uptake of A,F,E interventions was: 53.0% of the eligible children had received at least one treatment with azithromycin; 62.4% children had a clean face on examination; 72.5% households reported washing faces of children two or more times a day; 73.1% households had received health education; 44.4% of households had water accessible within 30 minutes; and 6.3% households had pit latrines. Adjusting for age, sex, and district baseline prevalence of active trachoma, factors independently associated with reduced odds of a more severe active trachoma sign were: receiving three treatments with azithromycin (odds ratio [OR] = 0.1; 95% confidence interval [CI] 0.0-0.4); clean face (OR = 0.3; 95% CI 0.2-0.4); washing faces of children three or more times daily (OR = 0.4; 95% CI 0.3-0.7); and presence and use of a pit latrine in the household (OR = 0.4; 95% CI 0.2-0.9). Analysis of associations between the A,F,E components of the SAFE strategy and active trachoma showed independent protective effects against active trachoma of mass systemic azithromycin treatment, facial cleanliness, face washing, and use of pit latrines in the household. This strongly argues for continued use of all the components of the SAFE strategy together.

  1. Quantifying Wheat Sensitivities to Environmental Constraints to Dissect Genotype × Environment Interactions in the Field1[OPEN

    PubMed Central

    Maphosa, Lance; Kovalchuk, Alex

    2017-01-01

    Yield is subject to strong genotype-by-environment (G × E) interactions in the field, especially under abiotic constraints such as soil water deficit (drought [D]) and high temperature (heat [H]). Since environmental conditions show strong fluctuations during the whole crop cycle, geneticists usually do not consider environmental measures as quantitative variables but rather as factors in multienvironment analyses. Based on 11 experiments in a field platform with contrasting temperature and soil water deficit, we determined the periods of sensitivity to drought and heat constraints in wheat (Triticum aestivum) and determined the average sensitivities for major yield components. G × E interactions were separated into their underlying components, constitutive genotypic effect (G), G × D, G × H, and G × H × D, and were analyzed for two genotypes, highlighting contrasting responses to heat and drought constraints. We then tested the constitutive and responsive behaviors of two strong quantitative trait loci (QTLs) associated previously with yield components. This analysis confirmed the constitutive effect of the chromosome 1B QTL and explained the G × E interaction of the chromosome 3B QTL by a benefit of one allele when temperature rises. In addition to the method itself, which can be applied to other data sets and populations, this study will support the cloning of a major yield QTL on chromosome 3B that is highly dependent on environmental conditions and for which the climatic interaction is now quantified. PMID:28546436

  2. TOOLS FOR COMPARATIVE ANALYSIS OF ALTERNATIVES: COMPETING OR COMPLEMENTARY PERSPECTIVES?

    EPA Science Inventory

    A third generation of environmental policymaking and risk management will increasingly impose environmental measures, which may give rise to analyzing countervailing risks. Therefore, a comprehensive analysis of these risks associated with the decision alternatives at hand will e...

  3. Nonradiological chemical pathway analysis and identification of chemicals of concern for environmental monitoring at the Hanford Site

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Blanton, M.L.; Cooper, A.T.; Castleton, K.J.

    1995-11-01

    Pacific Northwest`s Surface Environmental Surveillance Project (SESP) is an ongoing effort tot design, review, and conducted monitoring on and off the Hanford site. Chemicals of concern that were selected are listed. Using modeled exposure pathways, the offsite cancer incidence and hazard quotient were calculated and a retrospective pathway analysis performed to estimate what onsite concentrations would be required in the soil for each chemical of concern and other detected chemicals that would be required to obtain an estimated offsite human-health risk of 1.0E-06 cancer incidence or 1.0 hazard quotient. This analysis indicates that current nonradiological chemical contamination occurring on themore » site does not pose a significant offsite human-health risk; the highest cancer incidence to the offsite maximally exposed individual was from arsenic (1.76E-10); the highest hazard quotient was chromium(VI) (1.48E-04). The most sensitive pathways of exposure were surfacewater and aquatic food consumption. Combined total offsite excess cancer incidence was 2.09E-10 and estimated hazard quotient was 2.40E-04. Of the 17 identified chemicals of concern, the SESP does not currently (routinely) monitor arsenic, benzo(a)pyrene, bis(2- ethylhexyl)phthalate (BEHP), and chrysene. Only 3 of the chemicals of concern (arsenic, BEHP, chloroform) could actually occur in onsite soil at concern high enough to cause a 1.0E-06 excess cancer incidence or a 1.0 hazard index for a given offsite exposure pathway. During the retrospective analysis, 20 other chemicals were also evaluated; only vinyl chloride and thallium could reach targeted offsite risk values.« less

  4. Energy efficient engine: Flight propulsion system, preliminary analysis and design update

    NASA Technical Reports Server (NTRS)

    Stearns, E. M.

    1982-01-01

    The preliminary design of General Electric's Energy Efficient Engine (E3) was reported in detail in 1980. Since then, the design has been refined and the components have been rig-tested. The changes which have occurred in the engine and a reassessment of the economic payoff are presented in this report. All goals for efficiency, environmental considerations, and economic payoff are being met. The E3 Flight Propulsion System has 14.9% lower sfc than a CF6-50C. It provides a 7.1% reduction in direct operating cost for a short haul domestic transport and 14.5% reduction for an international long distance transport.

  5. 7 CFR Appendix E to Subpart E of... - Environmental Assessment Guidelines

    Code of Federal Regulations, 2011 CFR

    2011-01-01

    ... items and questions and contain as attachments the indicated descriptive materials, as well as the.... When necessary for descriptive purposes or environmental analysis, include land use maps or other.... Evaluate the impact on air quality given the types and amounts of projected emissions, the existing air...

  6. 7 CFR Appendix E to Subpart E of... - Environmental Assessment Guidelines

    Code of Federal Regulations, 2014 CFR

    2014-01-01

    ... items and questions and contain as attachments the indicated descriptive materials, as well as the.... When necessary for descriptive purposes or environmental analysis, include land use maps or other.... Evaluate the impact on air quality given the types and amounts of projected emissions, the existing air...

  7. 7 CFR Appendix E to Subpart E of... - Environmental Assessment Guidelines

    Code of Federal Regulations, 2010 CFR

    2010-01-01

    ... items and questions and contain as attachments the indicated descriptive materials, as well as the.... When necessary for descriptive purposes or environmental analysis, include land use maps or other.... Evaluate the impact on air quality given the types and amounts of projected emissions, the existing air...

  8. 7 CFR Appendix E to Subpart E of... - Environmental Assessment Guidelines

    Code of Federal Regulations, 2013 CFR

    2013-01-01

    ... items and questions and contain as attachments the indicated descriptive materials, as well as the.... When necessary for descriptive purposes or environmental analysis, include land use maps or other.... Evaluate the impact on air quality given the types and amounts of projected emissions, the existing air...

  9. 7 CFR Appendix E to Subpart E of... - Environmental Assessment Guidelines

    Code of Federal Regulations, 2012 CFR

    2012-01-01

    ... items and questions and contain as attachments the indicated descriptive materials, as well as the.... When necessary for descriptive purposes or environmental analysis, include land use maps or other.... Evaluate the impact on air quality given the types and amounts of projected emissions, the existing air...

  10. 32 CFR 651.43 - Format of the EIS.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... ENVIRONMENTAL ANALYSIS OF ARMY ACTIONS (AR 200-2) Environmental Impact Statement § 651.43 Format of the EIS. The... following (detailed content is discussed in appendix E of this part): (a) Cover sheet. (b) Summary. (c) Table of contents. (d) Purpose of and need for the action. (e) Alternatives considered, including...

  11. 75 FR 19319 - Hydrogen Sulfide; Community Right-to-Know Toxic Chemical Release Reporting; Extension of Comment...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-04-14

    ... Analysis Division, Office of Information Analysis and Access (2842T), Environmental Protection Agency, 1200.... Martin, Acting Director, Office of Information Analysis and Access. [FR Doc. 2010-8527 Filed 4-13-10; 8... comments. E-mail: [email protected] . Mail: Office of Environmental Information (OEI) Docket...

  12. Marine extinction risk shaped by trait-environment interactions over 500 million years.

    PubMed

    Orzechowski, Emily A; Lockwood, Rowan; Byrnes, Jarrett E K; Anderson, Sean C; Finnegan, Seth; Finkel, Zoe V; Harnik, Paul G; Lindberg, David R; Liow, Lee Hsiang; Lotze, Heike K; McClain, Craig R; McGuire, Jenny L; O'Dea, Aaron; Pandolfi, John M; Simpson, Carl; Tittensor, Derek P

    2015-10-01

    Perhaps the most pressing issue in predicting biotic responses to present and future global change is understanding how environmental factors shape the relationship between ecological traits and extinction risk. The fossil record provides millions of years of insight into how extinction selectivity (i.e., differential extinction risk) is shaped by interactions between ecological traits and environmental conditions. Numerous paleontological studies have examined trait-based extinction selectivity; however, the extent to which these patterns are shaped by environmental conditions is poorly understood due to a lack of quantitative synthesis across studies. We conducted a meta-analysis of published studies on fossil marine bivalves and gastropods that span 458 million years to uncover how global environmental and geochemical changes covary with trait-based extinction selectivity. We focused on geographic range size and life habit (i.e., infaunal vs. epifaunal), two of the most important and commonly examined predictors of extinction selectivity. We used geochemical proxies related to global climate, as well as indicators of ocean acidification, to infer average global environmental conditions. Life-habit selectivity is weakly dependent on environmental conditions, with infaunal species relatively buffered from extinction during warmer climate states. In contrast, the odds of taxa with broad geographic ranges surviving an extinction (>2500 km for genera, >500 km for species) are on average three times greater than narrow-ranging taxa (estimate of odds ratio: 2.8, 95% confidence interval = 2.3-3.5), regardless of the prevailing global environmental conditions. The environmental independence of geographic range size extinction selectivity emphasizes the critical role of geographic range size in setting conservation priorities. © 2015 John Wiley & Sons Ltd.

  13. Army Net Zero Prove Out. Army Net Zero Training Report

    DTIC Science & Technology

    2014-11-20

    existing reporting systems (e.g., Army Energy and Water Reporting System, Solid Waste Annual Reporting- web , Headquarters Army Environmental System). 3...Testing a wave energy converter  Harnesses the pressure of a wave on the ocean floor 22  Conduct thermal building envelope analysis  IR ...bathroom f ixtures, ai r handling units, Less than 3𔄃W i rrigat ion controls w ith EPA Water’Sense approved equipment 1% 0 . .279% Acqu ire lower water

  14. The Environment-Power System Analysis Tool development program. [for spacecraft power supplies

    NASA Technical Reports Server (NTRS)

    Jongeward, Gary A.; Kuharski, Robert A.; Kennedy, Eric M.; Wilcox, Katherine G.; Stevens, N. John; Putnam, Rand M.; Roche, James C.

    1989-01-01

    The Environment Power System Analysis Tool (EPSAT) is being developed to provide engineers with the ability to assess the effects of a broad range of environmental interactions on space power systems. A unique user-interface-data-dictionary code architecture oversees a collection of existing and future environmental modeling codes (e.g., neutral density) and physical interaction models (e.g., sheath ionization). The user-interface presents the engineer with tables, graphs, and plots which, under supervision of the data dictionary, are automatically updated in response to parameter change. EPSAT thus provides the engineer with a comprehensive and responsive environmental assessment tool and the scientist with a framework into which new environmental or physical models can be easily incorporated.

  15. A quantitative PCR assay for aerobic, vinyl chloride- and ethene-assimilating microorganisms in groundwater.

    PubMed

    Jin, Yang Oh; Mattes, Timothy E

    2010-12-01

    Vinyl chloride (VC) is a known human carcinogen that is primarily formed in groundwater via incomplete anaerobic dechlorination of chloroethenes. Aerobic, ethene-degrading bacteria (etheneotrophs), which are capable of both fortuitous and growth-linked VC oxidation, could be important in natural attenuation of VC plumes that escape anaerobic treatment. In this work, we developed a quantitative, real-time PCR (qPCR) assay for etheneotrophs in groundwater. We designed and tested degenerate qPCR primers for two functional genes involved in aerobic, growth-coupled VC- and ethene-oxidation (etnC and etnE). Primer specificity to these target genes was tested by comparison to nucleotide sequence databases, PCR analysis of template DNA extracted from isolates and environmental samples, and sequencing of qPCR products obtained from VC-contaminated groundwater. The assay was made quantitative by constructing standard curves (threshold cycle vs log gene copy number) with DNA amplified from Mycobacterium strain JS60, an etheneotrophic isolate. Analysis of groundwater samples from three different VC-contaminated sites revealed that etnC abundance ranged from 1.6 × 10(3) - 1.0 × 10(5) copies/L groundwater while etnE abundance ranged from 4.3 × 10(3) - 6.3 × 10(5) copies/L groundwater. Our data suggest this novel environmental measurement method will be useful for supporting VC bioremediation strategies, assisting in site closure, and conducting microbial ecology studies involving etheneotrophs.

  16. Relationship between environmental management with quality of kampong space room (Case study: RW 3 of Sukun Sub District, Malang City)

    NASA Astrophysics Data System (ADS)

    Wardhani, D. K.; Azmi, D. S.; Purnamasari, W. D.

    2017-06-01

    RW 3 Sukun Malang was one of kampong that won the competition kampong environment and had managed to maintain the preservation of the kampong. Society of RW 3 Sukun undertake various activities to manage the environment by optimizing the use of kampong space. Despite RW 3 Sukun had conducted environmental management activities, there are several locations in the kampong space that less well maintained. The purpose of this research was to determine the relation of environmental management with the quality of kampong space in RW 3 Sukun. This research used qualitative and quantitative research approaches. Quantitative research conducted by using descriptive statistical analysis in assessing the quality of kampong space with weighting, scoring, and overlay maps. Quantitative research was also conducted on the relation analysis of environmental management with the quality of kampong space by using typology analysis and pearson correlation analysis. Qualitative research conducted on the analysis of environmental management and the relation analysis of environmental management with the quality of kampong space. Result of this research indicates that environmental management in RW 3 Sukun have relation with the quality of kampong space.

  17. The superconducting high-resolution soft X-ray spectrometer at the advanced biological and environmental X-ray facility

    NASA Astrophysics Data System (ADS)

    Friedrich, S.; Drury, O. B.; George, S. J.; Cramer, S. P.

    2007-11-01

    We have built a 36-pixel superconducting tunnel junction X-ray spectrometer for chemical analysis of dilute samples in the soft X-ray band. It offers an energy resolution of ˜10-20 eV FWHM below 1 keV, a solid angle coverage of ˜10 -3, and can be operated at total rates of up to ˜10 6 counts/s. Here, we describe the spectrometer performance in speciation measurements by fluorescence-detected X-ray absorption spectroscopy at the Advanced Biological and Environmental X-ray facility at the ALS synchrotron.

  18. Environmental Management Model for Road Maintenance Operation Involving Community Participation

    NASA Astrophysics Data System (ADS)

    Triyono, A. R. H.; Setyawan, A.; Sobriyah; Setiono, P.

    2017-07-01

    Public expectations of Central Java, which is very high on demand fulfillment, especially road infrastructure as outlined in the number of complaints and community expectations tweeter, Short Mail Massage (SMS), e-mail and public reports from various media, Highways Department of Central Java province requires development model of environmental management in the implementation of a routine way by involving the community in order to fulfill the conditions of a representative, may serve road users safely and comfortably. This study used survey method with SEM analysis and SWOT with Latent Independent Variable (X), namely; Public Participation in the regulation, development, construction and supervision of road (PSM); Public behavior in the utilization of the road (PMJ) Provincial Road Service (PJP); Safety in the Provincial Road (KJP); Integrated Management System (SMT) and latent dependent variable (Y) routine maintenance of the provincial road that is integrated with the environmental management system and involve the participation of the community (MML). The result showed the implementation of routine maintenance of road conditions in Central Java province has yet to implement an environmental management by involving the community; Therefore developed environmental management model with the results of H1: Community Participation (PSM) has positive influence on the Model of Environmental Management (MML); H2: Behavior Society in Jalan Utilization (PMJ) positive effect on Model Environmental Management (MML); H3: Provincial Road Service (PJP) positive effect on Model Environmental Management (MML); H4: Safety in the Provincial Road (KJP) positive effect on Model Environmental Management (MML); H5: Integrated Management System (SMT) has positive influence on the Model of Environmental Management (MML). From the analysis obtained formulation model describing the relationship / influence of the independent variables PSM, PMJ, PJP, KJP, and SMT on the dependent variable MML as follows: MML = 0.13 + 0.07 PSM PJP PMJ + 0.09 + 0.19 + 0.48 KJP SMT + e

  19. Photodegradation behaviour of estriol: An insight on natural aquatic organic matter influence.

    PubMed

    Oliveira, Cindy; Lima, Diana L D; Silva, Carla Patrícia; Otero, Marta; Esteves, Valdemar I

    2016-09-01

    Estriol (E3) is one of the steroidal estrogens ubiquitously found in the aquatic environment, photodegradation being an important pathway for the elimination of such endocrine disrupting compounds. However, it is important to understand how environmentally important components present in aquatic matrices, such as organic matter, may affect their photodegradation. The main objective of this work was to investigate the photodegradation of E3 in water, under simulated solar radiation, as well as the effect of humic substances (HS - humic acids (HA), fulvic acids (FA) and XAD-4 fraction) in E3 photodegradation. Moreover, the photodegradation behaviour of E3 when present in different environmental aquatic matrices (fresh, estuarine and waste water samples) was also assessed. Results showed a completely different E3 degradation rate depending on the aquatic matrix. In ultrapure water the half-life obtained was about 50 h, while in presence of HS it varied between 5 and 10 h. Then, half-life times between 1.6 and 9.5 h were determined in environmental samples, in which it was observed that the matrix composition contributed up to 97% for the overall E3 photodegradation. Therefore, E3 photodegradation in the considered aquatic matrices was mostly caused by photosensitizing reactions (indirect photodegradation). Copyright © 2016 Elsevier Ltd. All rights reserved.

  20. 78 FR 38236 - Proposed Establishment, Modification and Cancellation of Air Traffic Service (ATS) Routes...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2013-06-26

    ... traffic and to advance the use of Performance Based Navigation technology. Environmental Review This proposal will be subject to an environmental analysis in accordance with FAA Order 1050.1E, ``Environmental... invited on the overall regulatory, aeronautical, economic, environmental, and energy-related aspects of...

  1. Within outlying mean indexes: refining the OMI analysis for the realized niche decomposition.

    PubMed

    Karasiewicz, Stéphane; Dolédec, Sylvain; Lefebvre, Sébastien

    2017-01-01

    The ecological niche concept has regained interest under environmental change (e.g., climate change, eutrophication, and habitat destruction), especially to study the impacts on niche shift and conservatism. Here, we propose the within outlying mean indexes (WitOMI), which refine the outlying mean index (OMI) analysis by using its properties in combination with the K -select analysis species marginality decomposition. The purpose is to decompose the ecological niche into subniches associated with the experimental design, i.e., taking into account temporal and/or spatial subsets. WitOMI emphasize the habitat conditions that contribute (1) to the definition of species' niches using all available conditions and, at the same time, (2) to the delineation of species' subniches according to given subsets of dates or sites. The latter aspect allows addressing niche dynamics by highlighting the influence of atypical habitat conditions on species at a given time and/or space. Then, (3) the biological constraint exerted on the species subniche becomes observable within Euclidean space as the difference between the existing fundamental subniche and the realized subniche. We illustrate the decomposition of published OMI analyses, using spatial and temporal examples. The species assemblage's subniches are comparable to the same environmental gradient, producing a more accurate and precise description of the assemblage niche distribution under environmental change. The WitOMI calculations are available in the open-access R package "subniche."

  2. Characterization of Aeromonas hydrophila Wound Pathotypes by Comparative Genomic and Functional Analyses of Virulence Genes

    PubMed Central

    Grim, Christopher J.; Kozlova, Elena V.; Sha, Jian; Fitts, Eric C.; van Lier, Christina J.; Kirtley, Michelle L.; Joseph, Sandeep J.; Read, Timothy D.; Burd, Eileen M.; Tall, Ben D.; Joseph, Sam W.; Horneman, Amy J.; Chopra, Ashok K.; Shak, Joshua R.

    2013-01-01

    ABSTRACT Aeromonas hydrophila has increasingly been implicated as a virulent and antibiotic-resistant etiologic agent in various human diseases. In a previously published case report, we described a subject with a polymicrobial wound infection that included a persistent and aggressive strain of A. hydrophila (E1), as well as a more antibiotic-resistant strain of A. hydrophila (E2). To better understand the differences between pathogenic and environmental strains of A. hydrophila, we conducted comparative genomic and functional analyses of virulence-associated genes of these two wound isolates (E1 and E2), the environmental type strain A. hydrophila ATCC 7966T, and four other isolates belonging to A. aquariorum, A. veronii, A. salmonicida, and A. caviae. Full-genome sequencing of strains E1 and E2 revealed extensive differences between the two and strain ATCC 7966T. The more persistent wound infection strain, E1, harbored coding sequences for a cytotoxic enterotoxin (Act), a type 3 secretion system (T3SS), flagella, hemolysins, and a homolog of exotoxin A found in Pseudomonas aeruginosa. Corresponding phenotypic analyses with A. hydrophila ATCC 7966T and SSU as reference strains demonstrated the functionality of these virulence genes, with strain E1 displaying enhanced swimming and swarming motility, lateral flagella on electron microscopy, the presence of T3SS effector AexU, and enhanced lethality in a mouse model of Aeromonas infection. By combining sequence-based analysis and functional assays, we characterized an A. hydrophila pathotype, exemplified by strain E1, that exhibited increased virulence in a mouse model of infection, likely because of encapsulation, enhanced motility, toxin secretion, and cellular toxicity. PMID:23611906

  3. Gene-Environment Interplay in Internalizing Disorders: Consistent Findings across Six Environmental Risk Factors

    ERIC Educational Resources Information Center

    Hicks, Brian M.; Dirago, Ana C.; Iacono, William G.; McGue, Matt

    2009-01-01

    Background: Behavior genetic methods can help to elucidate gene-environment (G-E) interplay in the development of internalizing (INT) disorders (i.e., major depression and anxiety disorders). To date, however, no study has conducted a comprehensive analysis examining multiple environmental risk factors with the purpose of delineating general…

  4. Evaluation of the Environmental DNA Method for Estimating Distribution and Biomass of Submerged Aquatic Plants

    PubMed Central

    Matsuhashi, Saeko; Doi, Hideyuki; Fujiwara, Ayaka; Watanabe, Sonoko; Minamoto, Toshifumi

    2016-01-01

    The environmental DNA (eDNA) method has increasingly been recognized as a powerful tool for monitoring aquatic animal species; however, its application for monitoring aquatic plants is limited. To evaluate eDNA analysis for estimating the distribution of aquatic plants, we compared its estimated distributions with eDNA analysis, visual observation, and past distribution records for the submerged species Hydrilla verticillata. Moreover, we conducted aquarium experiments using H. verticillata and Egeria densa and analyzed the relationships between eDNA concentrations and plant biomass to investigate the potential for biomass estimation. The occurrences estimated by eDNA analysis closely corresponded to past distribution records, and eDNA detections were more frequent than visual observations, indicating that the method is potentially more sensitive. The results of the aquarium experiments showed a positive relationship between plant biomass and eDNA concentration; however, the relationship was not always significant. The eDNA concentration peaked within three days of the start of the experiment in most cases, suggesting that plants do not release constant amounts of DNA. These results showed that eDNA analysis can be used for distribution surveys, and has the potential to estimate the biomass of aquatic plants. PMID:27304876

  5. Evaluation of the Environmental DNA Method for Estimating Distribution and Biomass of Submerged Aquatic Plants.

    PubMed

    Matsuhashi, Saeko; Doi, Hideyuki; Fujiwara, Ayaka; Watanabe, Sonoko; Minamoto, Toshifumi

    2016-01-01

    The environmental DNA (eDNA) method has increasingly been recognized as a powerful tool for monitoring aquatic animal species; however, its application for monitoring aquatic plants is limited. To evaluate eDNA analysis for estimating the distribution of aquatic plants, we compared its estimated distributions with eDNA analysis, visual observation, and past distribution records for the submerged species Hydrilla verticillata. Moreover, we conducted aquarium experiments using H. verticillata and Egeria densa and analyzed the relationships between eDNA concentrations and plant biomass to investigate the potential for biomass estimation. The occurrences estimated by eDNA analysis closely corresponded to past distribution records, and eDNA detections were more frequent than visual observations, indicating that the method is potentially more sensitive. The results of the aquarium experiments showed a positive relationship between plant biomass and eDNA concentration; however, the relationship was not always significant. The eDNA concentration peaked within three days of the start of the experiment in most cases, suggesting that plants do not release constant amounts of DNA. These results showed that eDNA analysis can be used for distribution surveys, and has the potential to estimate the biomass of aquatic plants.

  6. Design and Experimental Verification of Chang'E-3 Moon-night Survival Device for APXS

    NASA Astrophysics Data System (ADS)

    Deng-yi, Chen; Jian, Wu; Yi-ming, Hu; Jin, Chang; Yi-zhong, Gong; Ming-sheng, Cai; Huan-yu, Wang; Jia-yu, Zhang; Xing-zhu, Cui; Jin-zhou, Wang

    2016-07-01

    The Active Particle X-ray Spectrometer (APXS) is one of the 4 scientific payloads of Chang'E-3 (CE-3) Lunar Rover, of which the scientific object is to identify the elements of lunar soil and rock samples by a carried radioactive source to trigger and detect the characteristic X-ray from them. According to the extreme temperature environment of the APXS and under the restriction of limited resources, this paper presents the design and analysis of the moon-night survival device RHU (radioisotope heating unit) for the APXS, and describes the corresponding environmental tests on its structure dynamics and moon-night survival. Finally, its reinstallation on the launch tower and the preliminary result of its on-orbit operation are introduced.

  7. A novel application of motion analysis for detecting stress responses in embryos at different stages of development.

    PubMed

    Tills, Oliver; Bitterli, Tabitha; Culverhouse, Phil; Spicer, John I; Rundle, Simon

    2013-02-01

    Motion analysis is one of the tools available to biologists to extract biologically relevant information from image datasets and has been applied to a diverse range of organisms. The application of motion analysis during early development presents a challenge, as embryos often exhibit complex, subtle and diverse movement patterns. A method of motion analysis able to holistically quantify complex embryonic movements could be a powerful tool for fields such as toxicology and developmental biology to investigate whole organism stress responses. Here we assessed whether motion analysis could be used to distinguish the effects of stressors on three early developmental stages of each of three species: (i) the zebrafish Danio rerio (stages 19 h, 21.5 h and 33 h exposed to 1.5% ethanol and a salinity of 5); (ii) the African clawed toad Xenopus laevis (stages 24, 32 and 34 exposed to a salinity of 20); and iii) the pond snail Radix balthica (stages E3, E4, E6, E9 and E11 exposed to salinities of 5, 10 and 15). Image sequences were analysed using Sparse Optic Flow and the resultant frame-to-frame motion parameters were analysed using Discrete Fourier Transform to quantify the distribution of energy at different frequencies. This spectral frequency dataset was then used to construct a Bray-Curtis similarity matrix and differences in movement patterns between embryos in this matrix were tested for using ANOSIM. Spectral frequency analysis of these motion parameters was able to distinguish stage-specific effects of environmental stressors in most cases, including Xenopus laevis at stages 24, 32 and 34 exposed to a salinity of 20, Danio rerio at 33 hpf exposed to 1.5% ethanol, and Radix balthica at stages E4, E9 and E11 exposed to salinities of 5, 10 and 15. This technique was better able to distinguish embryos exposed to stressors than analysis of manual quantification of movement and within species distinguished most of the developmental stages studied in the control treatments. This innovative use of motion analysis incorporates data quantifying embryonic movements at a range of frequencies and so provides an holistic analysis of an embryo's movement patterns. This technique has potential applications for quantifying embryonic responses to environmental stressors such as exposure to pharmaceuticals or pollutants, and also as an automated tool for developmental staging of embryos.

  8. Quantifying Wheat Sensitivities to Environmental Constraints to Dissect Genotype × Environment Interactions in the Field.

    PubMed

    Parent, Boris; Bonneau, Julien; Maphosa, Lance; Kovalchuk, Alex; Langridge, Peter; Fleury, Delphine

    2017-07-01

    Yield is subject to strong genotype-by-environment (G × E) interactions in the field, especially under abiotic constraints such as soil water deficit (drought [D]) and high temperature (heat [H]). Since environmental conditions show strong fluctuations during the whole crop cycle, geneticists usually do not consider environmental measures as quantitative variables but rather as factors in multienvironment analyses. Based on 11 experiments in a field platform with contrasting temperature and soil water deficit, we determined the periods of sensitivity to drought and heat constraints in wheat ( Triticum aestivum ) and determined the average sensitivities for major yield components. G × E interactions were separated into their underlying components, constitutive genotypic effect (G), G × D, G × H, and G × H × D, and were analyzed for two genotypes, highlighting contrasting responses to heat and drought constraints. We then tested the constitutive and responsive behaviors of two strong quantitative trait loci (QTLs) associated previously with yield components. This analysis confirmed the constitutive effect of the chromosome 1B QTL and explained the G × E interaction of the chromosome 3B QTL by a benefit of one allele when temperature rises. In addition to the method itself, which can be applied to other data sets and populations, this study will support the cloning of a major yield QTL on chromosome 3B that is highly dependent on environmental conditions and for which the climatic interaction is now quantified. © 2017 American Society of Plant Biologists. All Rights Reserved.

  9. Molecular identification of Enterocytozoon bieneusi, Cryptosporidium, and Giardia in Brazilian captive birds.

    PubMed

    da Cunha, Maria Júlia Rodrigues; Cury, Márcia Cristina; Santín, Mónica

    2017-02-01

    A total of 85 fecal samples from captive birds collected from October 2013 to September 2014 in Uberlândia and Belo Horizonte in the state of Minas Gerais (Brazil) were evaluated for the presence of Enterocytozoon bieneusi, Cryptosporidium, and Giardia by PCR. Of these, three birds were found positive for E. bieneusi (3.5%), two for Cryptosporidium (2.3%), and one for Giardia (1.2%). Two genotypes of E. bieneusi were detected by nucleotide sequence analysis of the ITS region, genotypes D and Peru 6 in a swan goose and in two rock pigeons, respectively. For Cryptosporidium and Giardia, nucleotide sequence analysis of the SSU rRNA identified Cryptosporidium baileyi and Duck genotype in a swan goose and a mandarin duck, respectively, and Giardia duodenalis assemblage A in a toco toucon. Our results demonstrate that human-pathogenic E. bieneusi genotypes D and Peru6 and G. duodenalis assemblage A are present in captive birds in Brazil, corroborating their potential role as a source of human infection and environmental contamination.

  10. Parallel Computing and Model Evaluation for Environmental Systems: An Overview of the Supermuse and Frames Software Technologies

    EPA Science Inventory

    ERD’s Supercomputer for Model Uncertainty and Sensitivity Evaluation (SuperMUSE) is a key to enhancing quality assurance in environmental models and applications. Uncertainty analysis and sensitivity analysis remain critical, though often overlooked steps in the development and e...

  11. 4D Near Real-Time Environmental Monitoring Using Highly Temporal LiDAR

    NASA Astrophysics Data System (ADS)

    Höfle, Bernhard; Canli, Ekrem; Schmitz, Evelyn; Crommelinck, Sophie; Hoffmeister, Dirk; Glade, Thomas

    2016-04-01

    The last decade has witnessed extensive applications of 3D environmental monitoring with the LiDAR technology, also referred to as laser scanning. Although several automatic methods were developed to extract environmental parameters from LiDAR point clouds, only little research has focused on highly multitemporal near real-time LiDAR (4D-LiDAR) for environmental monitoring. Large potential of applying 4D-LiDAR is given for landscape objects with high and varying rates of change (e.g. plant growth) and also for phenomena with sudden unpredictable changes (e.g. geomorphological processes). In this presentation we will report on the most recent findings of the research projects 4DEMON (http://uni-heidelberg.de/4demon) and NoeSLIDE (https://geomorph.univie.ac.at/forschung/projekte/aktuell/noeslide/). The method development in both projects is based on two real-world use cases: i) Surface parameter derivation of agricultural crops (e.g. crop height) and ii) change detection of landslides. Both projects exploit the "full history" contained in the LiDAR point cloud time series. One crucial initial step of 4D-LiDAR analysis is the co-registration over time, 3D-georeferencing and time-dependent quality assessment of the LiDAR point cloud time series. Due to the high amount of datasets (e.g. one full LiDAR scan per day), the procedure needs to be performed fully automatically. Furthermore, the online near real-time 4D monitoring system requires to set triggers that can detect removal or moving of tie reflectors (used for co-registration) or the scanner itself. This guarantees long-term data acquisition with high quality. We will present results from a georeferencing experiment for 4D-LiDAR monitoring, which performs benchmarking of co-registration, 3D-georeferencing and also fully automatic detection of events (e.g. removal/moving of reflectors or scanner). Secondly, we will show our empirical findings of an ongoing permanent LiDAR observation of a landslide (Gresten, Austria) and an agricultural maize crop stand (Heidelberg, Germany). This research demonstrates the potential and also limitations of fully automated, near real-time 4D LiDAR monitoring in geosciences.

  12. 78 FR 70093 - Notice of Final Federal Agency Actions on Proposed Highway in North Carolina

    Federal Register 2010, 2011, 2012, 2013, 2014

    2013-11-22

    ...). For the North Carolina Department of Transportation (NCDOT): Richard Hancock, P.E., Environmental Director, Project Development and Environmental Analysis, North Carolina Department of Transportation...-1548; Telephone (919) 707-6000, [email protected] NCDOT--Project Development and Environmental...

  13. Benchmarking Commercial Reliability Practices.

    DTIC Science & Technology

    1995-07-01

    companies (70% of total), and to actually receive completed survey forms from 40 companies ( 60 % of participants, 40% of total identified). Reliability...E -20 -30 - A B C D E F G H I J KL MN OP Q R -40 - A = FMEA , B = FTA, C =Thermal Analysis, D = Sneak Circuit Analysis, E = Worst-Case Circuit Analysis...Failure Modes and Effects Analysis ( FMEA ), will be conducted. c. Commercial companies specify the environmental conditions for their products. In doing

  14. Persistence of culturable Escherichia coli fecal contaminants in dairy alpine grassland soils.

    PubMed

    Texier, Stéphanie; Prigent-Combaret, Claire; Gourdon, Marie Hélène; Poirier, Marie Andrée; Faivre, Pierre; Dorioz, Jean Marcel; Poulenard, Jérome; Jocteur-Monrozier, Lucile; Moënne-Loccoz, Yvan; Trevisan, Dominique

    2008-01-01

    Our knowledge of Escherichia coli (E. coli) ecology in the field is very limited in the case of dairy alpine grassland soils. Here, our objective was to monitor field survival of E. coli in cow pats and underlying soils in four different alpine pasture units, and to determine whether the soil could constitute an environmental reservoir. E. coli was enumerated by MPN using a selective medium. E. coli survived well in cow pats (10(7) to 10(8) cells g(-1) dry pat), but cow pats disappeared within about 2 mo. In each pasture unit, constant levels of E. coli (10(3) to 10(4) cells g(-1) dry soil) were recovered from all topsoil (0-5 cm) samples regardless of the sampling date, that is, under the snow cover, immediately after snow melting, or during the pasture season (during and after the decomposition of pats). In deeper soil layers below the root zone (5-25 cm), E. coli persistence varied according to soil type, with higher numbers recovered in poorly-drained soils (10(3) to 10(4) cells g(-1) dry soil) than in well-drained soils (< 10(2) cells g(-1) dry soil). A preliminary analysis of 38 partial uidA sequences of E. coli from pat and soils highlighted a cluster containing sequences only found in this work. Overall, this study raises the possibility that fecal E. coli could have formed a naturalized (sub)population, which is now part of the indigenous soil community of alpine pasture grasslands, the soil thus representing an environmental reservoir of E. coli.

  15. Warning Triggers in Environmental Hazards: Who Should Be Warned to Do What and When?

    PubMed

    Cova, Thomas J; Dennison, Philip E; Li, Dapeng; Drews, Frank A; Siebeneck, Laura K; Lindell, Michael K

    2017-04-01

    Determining the most effective public warnings to issue during a hazardous environmental event is a complex problem. Three primary questions need to be answered: Who should take protective action? What is the best action? and When should this action be initiated? Warning triggers provide a proactive means for emergency managers to simultaneously answer these questions by recommending that a target group take a specified protective action if a preset environmental trigger condition occurs (e.g., warn a community to evacuate if a wildfire crosses a proximal ridgeline). Triggers are used to warn the public across a wide variety of environmental hazards, and an improved understanding of their nature and role promises to: (1) advance protective action theory by unifying the natural, built, and social themes in hazards research into one framework, (2) reveal important information about emergency managers' risk perception, situational awareness, and threat assessment regarding threat behavior and public response, and (3) advance spatiotemporal models for representing the geography and timing of disaster warning and response (i.e., a coupled natural-built-social system). We provide an overview and research agenda designed to advance our understanding and modeling of warning triggers. © 2016 Society for Risk Analysis.

  16. Environmental impacts and resource use of milk production on the North China Plain, based on life cycle assessment.

    PubMed

    Wang, Xiaoqin; Ledgard, Stewart; Luo, Jiafa; Guo, Yongqin; Zhao, Zhanqin; Guo, Liang; Liu, Song; Zhang, Nannan; Duan, Xueqin; Ma, Lin

    2018-06-01

    Life cycle assessment methodology was used to quantify the environmental impacts and resource use of milk production on the North China Plain, the largest milk production area in China. Variation in environmental burden caused by cow productivity was evaluated, as well as scenario analysis of the effects of improvement practices. The results indicated that the average environmental impact potential and resource use for producing 1kg of fat and protein corrected milk was 1.34kgCO 2 eq., 9.27gPO 4 3- eq., 19.5gSO 2 eq., 4.91MJ, 1.83m 2 and 266L for global warming potential (GWP), eutrophication potential (EP), acidification potential (AP), non-renewable energy use (NREU), land use (LU) and blue water use (BWU; i.e. water withdrawal), respectively. Feed production was a significant determinant of GWP, NREU, LU and BWU, while AP and EP were mainly affected by manure management. Scenario analysis showed that reducing use of concentrates and substituting with alfalfa hay decreased GWP, EP, AP, NREU and LU (by 1.0%-5.5%), but caused a significant increase of BWU (by 17.2%). Using imported soybean instead of locally-grown soybean decreased LU by 2.6%, but significantly increased GWP and NREU by 20% and 6.9%, respectively. There was no single perfect manure management system, with variable effects from different management practices. The environmental burden shifting observed in this study illustrates the importance of assessing a wide range of impact categories instead of single or limited indicators for formulating environmental policies, and the necessity of combining multiple measures to decrease the environmental burden. For the North China Plain, improving milking cow productivity and herd structure (i.e. increased proportion of milking cows), combining various manure management systems, and encouraging dairy farmers to return manure to nearby crop lands are promising measures to decrease multiple environmental impacts. Copyright © 2017 Elsevier B.V. All rights reserved.

  17. Informal e-waste recycling: environmental risk assessment of heavy metal contamination in Mandoli industrial area, Delhi, India.

    PubMed

    Pradhan, Jatindra Kumar; Kumar, Sudhir

    2014-01-01

    Nowadays, e-waste is a major source of environmental problems and opportunities due to presence of hazardous elements and precious metals. This study was aimed to evaluate the pollution risk of heavy metal contamination by informal recycling of e-waste. Environmental risk assessment was determined using multivariate statistical analysis, index of geoaccumulation, enrichment factor, contamination factor, degree of contamination and pollution load index by analysing heavy metals in surface soils, plants and groundwater samples collected from and around informal recycling workshops in Mandoli industrial area, Delhi, India. Concentrations of heavy metals like As (17.08 mg/kg), Cd (1.29 mg/kg), Cu (115.50 mg/kg), Pb (2,645.31 mg/kg), Se (12.67 mg/kg) and Zn (776.84 mg/kg) were higher in surface soils of e-waste recycling areas compared to those in reference site. Level exceeded the values suggested by the US Environmental Protection Agency (EPA). High accumulations of heavy metals were also observed in the native plant samples (Cynodon dactylon) of e-waste recycling areas. The groundwater samples collected form recycling area had high heavy metal concentrations as compared to permissible limit of Indian Standards and maximum allowable limit of WHO guidelines for drinking water. Multivariate analysis and risk assessment studies based on total metal content explains the clear-cut differences among sampling sites and a strong evidence of heavy metal pollution because of informal recycling of e-waste. This study put forward that prolonged informal recycling of e-waste may accumulate high concentration of heavy metals in surface soils, plants and groundwater, which will be a matter of concern for both environmental and occupational hazards. This warrants an immediate need of remedial measures to reduce the heavy metal contamination of e-waste recycling sites.

  18. Informal E-waste recycling in developing countries: review of metal(loid)s pollution, environmental impacts and transport pathways.

    PubMed

    Ackah, Michael

    2017-11-01

    Crude or primitive recycling practices are often adopted in material resource recovery from E-waste in developing nations. Significant human health and environmental impacts may occur because of such practices. Literature on metal(loid)s pollution during E-waste processing is fragmented. Here, I review the health and environmental impacts of E-waste recycling operations and transport pathways of metal(loid)s, dispersed during operations. This paper is organised into five sections. Section 1 relates to the background of global E-waste generation and legal/illegal trade, citing specific cases from Ghana and other developing nations. Section 2 provides a brief information on sources of metal(loid)s in E-waste. Section 3 describes characteristics of informal E-waste recycling operations in developing nations. Section 4 examines the health and environmental impacts in E-waste recycling while section 5 evaluates major transport pathways of metal(loid)s contaminants.

  19. Apolipoprotein E Genotype-Dependent Paradoxical Short-Term Effects of {sup 56}Fe Irradiation on the Brain

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Haley, Gwendolen E.; Division of Neuroscience, Oregon National Primate Research Center, Beaverton, OR; Villasana, Laura

    2012-11-01

    Purpose: In humans, apolipoprotein E (apoE) is encoded by three major alleles ({epsilon}2, {epsilon}3, and {epsilon}4) and, compared to apoE3, apoE4 increases the risk of developing Alzheimer disease and cognitive impairments following various environmental challenges. Exposure to irradiation, including that of {sup 56}Fe, during space missions poses a significant risk to the central nervous system, and apoE isoform might modulate this risk. Methods and Materials: We investigated whether apoE isoform modulates hippocampus-dependent cognitive performance starting 2 weeks after {sup 56}Fe irradiation. Changes in reactive oxygen species (ROS) can affect cognition and are induced by irradiation. Therefore, after cognitive testing, wemore » assessed hippocampal ROS levels in ex vivo brain slices, using the ROS-sensitive fluorescent probe, dihydroethidium (DHE). Brain levels of 3-nitrotyrosine (3-NT), CuZn superoxide dismutase (CuZnSOD), extracellular SOD, and apoE were assessed using Western blotting analysis. Results: In the water maze, spatial memory retention was impaired by irradiation in apoE2 and apoE4 mice but enhanced by irradiation in apoE3 mice. Irradiation reduced DHE-oxidation levels in the enclosed blade of the dentate gyrus and levels of 3-NT and CuZnSOD in apoE2 but not apoE3 or apoE4 mice. Finally, irradiation increased apoE levels in apoE3 but not apoE2 or apoE4 mice. Conclusions: The short-term effects of {sup 56}Fe irradiation on hippocampal ROS levels and hippocampus-dependent spatial memory retention are apoE isoform-dependent.« less

  20. Department of Defense In-House RDT and E Activities

    DTIC Science & Technology

    1976-10-30

    BALLISTIC TESTS.FAC AVAL FCR TESIS OF SP ELELTRONIC’ FIl’ CON EQUIP 4 RELATED SYSTEMS E COMPONFNTZ, 35 INSTALLATION: MEDICAL BIOENGINEERINC- R&D LABORATORY...ANALYSIS OF CHEMICAL AND METALLOGRAPHIC EFFECTS, MICROBIOLOGICAL EFFECTS, CLIMATIC ENVIRONMENTAL EFFECTS. TEST AND EVALUATE WARHEADS AND SPECIAL...CCMMUNICATI’N SYST:M INSTRUMENTED DROP ZONES ENGINEERING TEST FACILITY INSTRUMENTATION CALIBRATICN FACILITY SCIENTIFIC COMPUTER CENTER ENVIRONMENTAL TESY

  1. Examination of the Psychometric Properties of the Environmental School Transition Anxiety Scale

    ERIC Educational Resources Information Center

    Loke, Stephen W.; Lowe, Patricia A.

    2013-01-01

    A pilot study was conducted to examine the psychometric properties of the Environmental School Transition Anxiety Scale (E-STAS) with a sample of 220 fourth- to sixth-grade students who were about to or had completed their school transition. The results of an exploratory factor analysis (EFA) of the students' responses on the E-STAS produced a…

  2. Environmental Impact Analysis Process. Environmental Assessment for Defense Satellite Communications System III With Integrated Apogee Boost System

    DTIC Science & Technology

    1995-07-01

    spectabilis Royal fern C FDA n/o Remirea maritima Beach star E FDA, FNAI o Scaevola plumeria Scaevola T FDA o Tillandsia simulata Wildpine; air plant...unnamed) T FDA n/o Tillandsia utriculata Giant wildpine; giant air plant C FDA o 1 E = Endangered; T = Threatened; T(S/A) = Threatened due to

  3. 24 CFR 50.3 - Environmental policy.

    Code of Federal Regulations, 2010 CFR

    2010-04-01

    ... approach shall be used to assure the integrated use of the natural and social sciences and the environmental design arts in making decisions. (e) Environmental impacts shall be evaluated on as comprehensive...

  4. Effects of phytoestrogens and environmental estrogens on osteoblastic differentiation in MC3T3-E1 cells.

    PubMed

    Kanno, Sanae; Hirano, Seishiro; Kayama, Fujio

    2004-03-01

    Phytoestrogens and environmental estrogens, which have in part some structural similarity to 17beta-estradiol, are reported to act as agonists/antagonists of estrogen in animals and humans. Estrogen is known to play an important role in maintaining bone mass, since the concentration of serum estrogen decreases after menopause and the estrogen deficiency results in bone loss. In this study, we report the effects of phytoestrogens (genistein, daidzein, and coumestrol) and environmental estrogens (bisphenol A (BPA), p-n-nonylphenol (NP) and bis(2-ethylhexyl)phthalate (DEHP)) on osteoblast differentiation using MC3T3-E1 cells, a mouse calvaria osteoblast-like cell line. Coumestrol (10(-10) to 10(-6)M) slightly enhanced cell proliferation, while neither the other phytoestrogens (daidzein, genistein) nor environmental estrogens increased cell proliferation. Alkaline phosphatase (ALP) activity and cellular calcium (Ca) and phosphorus (P) contents were increased by phytoestrogens and BPA; however, neither NP nor DEHP affected those osteoblastic indicators. The effects of estrogenic potency, using the cell proliferation of MCF-7 cells, an estrogen receptor (ER)-positive human breast cancer cell line, indicate that coumestrol has the highest estrogenic potency among those phytoestrogens and environmental estrogens. The estrogenic potency of NP and DEHP were lower than the others. In conclusion, phytoestrogens, such as coumestrol, genistein and daidzein, and BPA increased ALP activity and enhanced bone mineralization in MC3T3-E1 cells, suggesting that not only phytoestrogen but also BPA, an environmental estrogen, is implicated in bone metabolism.

  5. Environmental Definition Program Cross Sectional Analysis; Summary of Data and Analysis Techniques

    DTIC Science & Technology

    1975-12-31

    selected locations, and to characterize cloud and precipitation systems during certain tests and experiments conducted at Wallops Flight Center and at...values. The LWCA was on- site at Wallops Flight Center assisting the special Elight measurements. Other computer programs developed were designed to...550581 N 37025, E Kiev 50024 N 30027 E Simferopol 45001, N 33059! E Perm 58001, N 56018, E Aktyubinsk 50020, N 570131 E Semipalatinsk 50021! N 80015

  6. Understanding the relation between urbanization and the eco-environment in China's Yangtze River Delta using an improved EKC model and coupling analysis.

    PubMed

    Zhao, Yabo; Wang, Shaojian; Zhou, Chunshan

    2016-11-15

    Better understanding the relationship between urbanization (U) and the eco-environment (E) is necessary to coordinate the development of them. Using a comprehensive index system for U and E with statistic data, and an improved environmental Kuznets curve (EKC) model and dynamic coordination coupling degree (CCD) model, this study addressed the relationship between U and E in the Yangtze River Delta (YRD) in the period 1980-2013. The main conclusions were as follows: (1) Economic urbanization and eco-environment endowment were the highest weighted factors in the U and E system respectively, and thus constitute the key factors. (2) Differentiated inverted-U curves were shown to exist in the relation between U and E across the cities studied, thereby confirming the improved EKC hypothesis. We further found economically developed areas to have higher urbanization levels than less developed areas at the point at which the curve inflects, less developed areas have higher eco-environmental pressure at inflection. Before the appearance of the inflection point, a striking positive correlation was observed between eco-environmental pressure and the urbanization level, while a negative correlation was found to follow it. (3) A dynamic coordination coupling relation was found to exist between U and E, which conforms to an S-shaped curve. The coordination coupling process in the YRD has gradually moved from a "low-grade symbiosis" stage into a "break-in development" stage, but the pattern of coordination belonging to the eco-environment part of the relation was found to always show some lag. The dynamic CCD model showed a difference in the spatial distribution of CCD, presenting higher values in the periphery of the region, and lower values in the center during the study period. The improved EKC and coupling analysis detailed in this study may help Chinese decision makers to formulate sustainable measures to balance urbanization development and eco-environment protection. Copyright © 2016 Elsevier B.V. All rights reserved.

  7. Multi-criteria Analysis of Factors for Application of Concrete Composites Considering Their Environmental Harmfulness

    NASA Astrophysics Data System (ADS)

    Paulikova, A.; Estokova, A.; Mitterpach, J.

    2017-10-01

    The analysis of factors is important in insight of the selection of proper building material with environmental added value. A comprehensive solution is possible if at the beginning there are all the relevant factors in detail characterized predominately that have got a major impact on the area in terms of environmentalharmfulness prevention. There are many groups of environmental factors. In this article only four factors are considered, i.e. contain of CrVI (mg/kg) and index of mass activity for radionuclides (Ra, Th, K) which are the most harmful. These factors can be evaluated by means of a supplementary tool, e.g. multi-criteriaanalysis, which improves and supports decision processes in the framework of construction bybuilding management, etc.

  8. 40 CFR 260.11 - References.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ...). (7) ASTM E 168-88, “Standard Practices for General Techniques of Infrared Quantitative Analysis,” IBR...-Visible Quantitative Analysis,” IBR approved for § 264.1063. (9) ASTM E 260-85, “Standard Practice for... materials are available for purchase from the Environmental Protection Agency, Research Triangle Park, NC...

  9. Gene-Environment Interplay in Internalizing Disorders: Consistent Findings across Six Environmental Risk Factors

    PubMed Central

    Hicks, Brian M.; DiRago, Ana C.; Iacono, William G.; McGue, Matt

    2009-01-01

    Background Newer behavior genetic methods can better elucidate gene-environment (G-E) interplay in the development of internalizing (INT) disorders (i.e., major depression and anxiety disorders). However, no study to date has conducted a comprehensive analysis examining multiple environmental risks with the purpose of delineating how general G-E mechanisms influence the development of INT disorders. Methods The sample consisted of 1315 male and female twin pairs participating in the age 17 assessment of the Minnesota Twin Family Study. Quantitative G-E interplay models were used to examine how genetic and environmental risk for INT disorders changes as a function of environmental context. Multiple measures and informants were employed to construct composite measures of INT disorders and 6 environmental risk factors including: stressful life events, mother-child and father-child relationship problems, antisocial and prosocial peer affiliation, and academic achievement and engagement. Results Significant moderation effects were detected between each environmental risk factor and INT such that in the context of greater environmental adversity, nonshared environmental factors became more important in the etiology of INT symptoms. Conclusion Our results are consistent with the interpretation that environmental stressors have a causative effect on the emergence of INT disorders. The consistency of our results suggests a general mechanism of environmental influence on INT disorders regardless of the specific form of environmental risk. PMID:19594836

  10. Gene-environment interplay in internalizing disorders: consistent findings across six environmental risk factors.

    PubMed

    Hicks, Brian M; DiRago, Ana C; Iacono, William G; McGue, Matt

    2009-10-01

    Behavior genetic methods can help to elucidate gene-environment (G-E) interplay in the development of internalizing (INT) disorders (i.e., major depression and anxiety disorders). To date, however, no study has conducted a comprehensive analysis examining multiple environmental risk factors with the purpose of delineating general mechanisms of G-E influence in the development of INT disorders. The sample consisted of 1315 male and female twin pairs participating in the age 17 assessment of the Minnesota Twin Family Study. Quantitative G-E interplay models were used to examine how genetic and environmental risk for INT disorders changes as a function of environmental context. Multiple measures and informants were employed to construct composite measures of INT disorders and six environmental risk factors including: stressful life events, mother-child and father-child relationship problems, antisocial and prosocial peer affiliation, and academic achievement and engagement. Significant moderation effects were detected between each environmental risk factor and INT such that in the context of greater environmental adversity, nonshared environmental factors became more important in the etiology of INT symptoms. Our results are consistent with the interpretation that environmental stressors have a causative effect on the emergence of INT disorders. The consistency of our results suggests a general mechanism of environmental influence on INT disorders regardless of the specific form of environmental risk.

  11. 78 FR 12304 - Lock+ Hydro Friends Fund XLII, LLC; Notice of Application Ready for Environmental Analysis and...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2013-02-22

    ... Friends Fund XLII, LLC; Notice of Application Ready for Environmental Analysis and Soliciting Comments...+ Hydro Friends Fund XLII, LLC. e. Name of Project: Braddock Locks and Dam Hydroelectric Project. f...\\ Hydro Friends Fund XLII, LLC, c/o Hydro Green Energy, LLC, 900 Oakmont Lane, Suite 310, Westmont, IL...

  12. COMPARING ENVIRONMENTALLY RELEVANT PCBS TO TCDD

    EPA Science Inventory

    COMPARING ENVIRONMENTALLY RELEVANT PCBS TO TCDD. D E Burgin1, J J Diliberto2 and L S Birnbaum3.1UNC, Chapel Hill, NC, USA; 2USEPA/ORD/NHEERL, ETD, RTP, NC, USA

    Environmental exposures to 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD) always occur as part of a complex mixture. ...

  13. Reproductive allocation in plants as affected by elevated carbon dioxide and other environmental changes: a synthesis using meta-analysis and graphical vector analysis.

    PubMed

    Wang, Xianzhong; Taub, Daniel R; Jablonski, Leanne M

    2015-04-01

    Reproduction is an important life history trait that strongly affects dynamics of plant populations. Although it has been well documented that elevated carbon dioxide (CO2) in the atmosphere greatly enhances biomass production in plants, the overall effect of elevated CO2 on reproductive allocation (RA), i.e., the proportion of biomass allocated to reproductive structures, is little understood. We combined meta-analysis with graphical vector analysis to examine the overall effect of elevated CO2 on RA and how other environmental factors, such as low nutrients, drought and elevated atmospheric ozone (O3), interacted with elevated CO2 in affecting RA in herbaceous plants. Averaged across all species of different functional groups and environmental conditions, elevated CO2 had little effect on RA (-0.9%). RA in plants of different reproductive strategies and functional groups, however, differed in response to elevated CO2. For example, RA in iteroparous wild species decreased by 8%, while RA in iteroparous crops increased significantly (+14%) at elevated CO2. RA was unaffected by CO2 in plants grown with no stress or in low-nutrient soils. RA decreased at elevated CO2 and elevated O3, but increased in response to elevated CO2 in drought-stressed plants, suggesting that elevated CO2 could ameliorate the adverse effect of drought on crop production to some extent. Our results demonstrate that elevated CO2 and other global environmental changes have the potential to greatly alter plant community composition through differential effects on RA of different plant species and thus affect the dynamics of natural and agricultural ecosystems in the future.

  14. Action tagging in a multi-user indoor environment for behavioural analysis purposes.

    PubMed

    Guerra, Claudio; Bianchi, Valentina; De Munari, Ilaria; Ciampolini, Paolo

    2015-01-01

    EU population is getting older, so that ICT-based solutions are expected to provide support in the challenges implied by the demographic change. At the University of Parma an AAL (Ambient Assisted Living) system, named CARDEA, has been developed. In this paper a new feature of the system is introduced, in which environmental and personal (i.e., wearable) sensors coexist, providing an accurate picture of the user's activity and needs. Environmental devices may greatly help in performing activity recognition and behavioral analysis tasks. However, in a multi-user environment, this implies the need of attributing environmental sensors outcome to a specific user, i.e., identifying the user when he performs a task detected by an environmental device. We implemented such an "action tagging" feature, based on information fusion, within the CARDEA environment, as an inexpensive, alternative solution to the problematic issue of indoor locationing.

  15. Genome-Wide Locations of Potential Epimutations Associated with Environmentally Induced Epigenetic Transgenerational Inheritance of Disease Using a Sequential Machine Learning Prediction Approach.

    PubMed

    Haque, M Muksitul; Holder, Lawrence B; Skinner, Michael K

    2015-01-01

    Environmentally induced epigenetic transgenerational inheritance of disease and phenotypic variation involves germline transmitted epimutations. The primary epimutations identified involve altered differential DNA methylation regions (DMRs). Different environmental toxicants have been shown to promote exposure (i.e., toxicant) specific signatures of germline epimutations. Analysis of genomic features associated with these epimutations identified low-density CpG regions (<3 CpG / 100bp) termed CpG deserts and a number of unique DNA sequence motifs. The rat genome was annotated for these and additional relevant features. The objective of the current study was to use a machine learning computational approach to predict all potential epimutations in the genome. A number of previously identified sperm epimutations were used as training sets. A novel machine learning approach using a sequential combination of Active Learning and Imbalance Class Learner analysis was developed. The transgenerational sperm epimutation analysis identified approximately 50K individual sites with a 1 kb mean size and 3,233 regions that had a minimum of three adjacent sites with a mean size of 3.5 kb. A select number of the most relevant genomic features were identified with the low density CpG deserts being a critical genomic feature of the features selected. A similar independent analysis with transgenerational somatic cell epimutation training sets identified a smaller number of 1,503 regions of genome-wide predicted sites and differences in genomic feature contributions. The predicted genome-wide germline (sperm) epimutations were found to be distinct from the predicted somatic cell epimutations. Validation of the genome-wide germline predicted sites used two recently identified transgenerational sperm epimutation signature sets from the pesticides dichlorodiphenyltrichloroethane (DDT) and methoxychlor (MXC) exposure lineage F3 generation. Analysis of this positive validation data set showed a 100% prediction accuracy for all the DDT-MXC sperm epimutations. Observations further elucidate the genomic features associated with transgenerational germline epimutations and identify a genome-wide set of potential epimutations that can be used to facilitate identification of epigenetic diagnostics for ancestral environmental exposures and disease susceptibility.

  16. An analysis of controls on fire activity in boreal Canada: comparing models built with different temporal resolutions

    Treesearch

    Marc-Andre Parisien; Sean A. Parks; Meg A. Krawchuk; John M. Little; Mike D. Flannigan; Lynn M. Gowman; Max A. Moritz

    2014-01-01

    Fire regimes of the Canadian boreal forest are driven by certain environmental factors that are highly variable from year to year (e.g., temperature, precipitation) and others that are relatively stable (e.g., land cover, topography). Studies examining the relative influence of these environmental drivers on fire activity suggest that models making explicit use of...

  17. Enterovirus Species B Bias of RD Cell Line and Its Influence on Enterovirus Diversity Landscape.

    PubMed

    Faleye, Temitope Oluwasegun Cephas; Adeniji, Johnson Adekunle

    2015-12-01

    Despite its widespread use in poliovirus isolation, studies show that most RD cell line isolates are species B enteroviruses (EB), it was therefore employed to further catalogue the EB diversity in two different regions of Nigeria. Concentrates of 18 environmental samples were inoculated into RD cell line. Isolates were subjected to PCR assays to detect enteroviruses, species C and B members and partial VP1 gene which was subsequently sequenced and used for identification and phylogenetic analysis. Isolates were further passaged in L20B cell line to detect polioviruses. Sixty-eight isolates were recovered from the 18 concentrates, all of which were positive for the enterovirus 5'-UTR screen. Thirteen of the 68 isolates were positive for the species C screen and replicated in L20B cell line, eleven of which also contained species B enteroviruses. Some of the mixed isolates were successfully typed, but as species B members. In all, isolates recovered in this study were identified as CVB5, E6, E7, E11, E13, E19, E20, E33, EVB75 and WPV3, while some could not be typed. Alongside the ten different enterovirus serotypes confirmed, results of this study document for the first time in Nigeria, EVB75. It showed the EB bias of RD cell line might indicate something much more fundamental in its biology. Finally, the finding of WPV3 in a region considered low risk for poliovirus emphasizes the need to expand poliovirus environmental surveillance to enable early detection of poliovirus silent circulation before occurrence of clinical manifestations.

  18. Use of Compound-Specific Stable Isotope Analysis to Distinguish between Vapor Intrusion and Indoor Sources of VOC

    DTIC Science & Technology

    2013-12-01

    trichloroethylene USEPA U.S. Environmental Protection Agency UST underground storage tank V-PDB Vienna - Pee Dee Belemnite ACRONYMS AND...compound (e.g., trichloroethylene [TCE]) can vary as a result of differences in their source material or compound synthesis or due to transformation... trichloroethylene [TCE], and benzene) that commonly drive VI investigations; 2) development of a protocol for application of CSIA in VI investigations; and 3

  19. Electronic waste management approaches: An overview

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Kiddee, Peeranart; Cooperative Research Centre for Contamination Assessment and Remediation of the Environment, Mawson Lakes Campus, Adelaide, SA 5095; Naidu, Ravi, E-mail: ravi.naidu@crccare.com

    2013-05-15

    Highlights: ► Human toxicity of hazardous substances in e-waste. ► Environmental impacts of e-waste from disposal processes. ► Life Cycle Assessment (LCA), Material Flow Analysis (MFA), Multi Criteria Analysis (MCA) and Extended Producer Responsibility (EPR) to and solve e-waste problems. ► Key issues relating to tools managing e-waste for sustainable e-waste management. - Abstract: Electronic waste (e-waste) is one of the fastest-growing pollution problems worldwide given the presence if a variety of toxic substances which can contaminate the environment and threaten human health, if disposal protocols are not meticulously managed. This paper presents an overview of toxic substances present inmore » e-waste, their potential environmental and human health impacts together with management strategies currently being used in certain countries. Several tools including Life Cycle Assessment (LCA), Material Flow Analysis (MFA), Multi Criteria Analysis (MCA) and Extended Producer Responsibility (EPR) have been developed to manage e-wastes especially in developed countries. The key to success in terms of e-waste management is to develop eco-design devices, properly collect e-waste, recover and recycle material by safe methods, dispose of e-waste by suitable techniques, forbid the transfer of used electronic devices to developing countries, and raise awareness of the impact of e-waste. No single tool is adequate but together they can complement each other to solve this issue. A national scheme such as EPR is a good policy in solving the growing e-waste problems.« less

  20. Application of effective discharge analysis to environmental flow decision-making

    USGS Publications Warehouse

    McKay, S. Kyle; Freeman, Mary C.; Covich, A.P.

    2016-01-01

    Well-informed river management decisions rely on an explicit statement of objectives, repeatable analyses, and a transparent system for assessing trade-offs. These components may then be applied to compare alternative operational regimes for water resource infrastructure (e.g., diversions, locks, and dams). Intra- and inter-annual hydrologic variability further complicates these already complex environmental flow decisions. Effective discharge analysis (developed in studies of geomorphology) is a powerful tool for integrating temporal variability of flow magnitude and associated ecological consequences. Here, we adapt the effectiveness framework to include multiple elements of the natural flow regime (i.e., timing, duration, and rate-of-change) as well as two flow variables. We demonstrate this analytical approach using a case study of environmental flow management based on long-term (60 years) daily discharge records in the Middle Oconee River near Athens, GA, USA. Specifically, we apply an existing model for estimating young-of-year fish recruitment based on flow-dependent metrics to an effective discharge analysis that incorporates hydrologic variability and multiple focal taxa. We then compare three alternative methods of environmental flow provision. Percentage-based withdrawal schemes outcompete other environmental flow methods across all levels of water withdrawal and ecological outcomes.

  1. Application of Effective Discharge Analysis to Environmental Flow Decision-Making.

    PubMed

    McKay, S Kyle; Freeman, Mary C; Covich, Alan P

    2016-06-01

    Well-informed river management decisions rely on an explicit statement of objectives, repeatable analyses, and a transparent system for assessing trade-offs. These components may then be applied to compare alternative operational regimes for water resource infrastructure (e.g., diversions, locks, and dams). Intra- and inter-annual hydrologic variability further complicates these already complex environmental flow decisions. Effective discharge analysis (developed in studies of geomorphology) is a powerful tool for integrating temporal variability of flow magnitude and associated ecological consequences. Here, we adapt the effectiveness framework to include multiple elements of the natural flow regime (i.e., timing, duration, and rate-of-change) as well as two flow variables. We demonstrate this analytical approach using a case study of environmental flow management based on long-term (60 years) daily discharge records in the Middle Oconee River near Athens, GA, USA. Specifically, we apply an existing model for estimating young-of-year fish recruitment based on flow-dependent metrics to an effective discharge analysis that incorporates hydrologic variability and multiple focal taxa. We then compare three alternative methods of environmental flow provision. Percentage-based withdrawal schemes outcompete other environmental flow methods across all levels of water withdrawal and ecological outcomes.

  2. Environmental risk assessment of CRT and PCB workshops in a mobile e-waste recycling plant.

    PubMed

    Song, Qingbin; Zeng, Xianlai; Li, Jinhui; Duan, Huabo; Yuan, Wenyi

    2015-08-01

    The mobile e-waste recycling equipment was chosen as the object of this study, including manual dismantling, mechanical separation of cathode ray tubes (CRTs), and printed circuit boards (PCBs) in the two independent workshops. To determine the potential environmental contamination, the noise, the heavy metals (Cu, Cd, Pb), and the environmental impacts of the e-waste recycling processes in the two workshops of the mobile plant have been evaluated in this paper. This study determined that when control measures are employed, the noise within the two workshops (<80 dB) will meet the national standards. In the CRT workshop, Pb was the most polluting metal, with 2.3 μg/m(3) and 10.53 mg/g in the air and floor dust, respectively. The result of a health risk assessment shows that noncancerous effects are possible for Pb (hazard index (HI) = 3.54 in the CRT workshop and HI = 1.27 in the PCB workshop). The carcinogenic risks to workers for Cd are relatively light in both the workshops. From the results of life cycle assessment (LCA), it can be seen that there was an environmental benefit from the e-waste recycling process as a whole.

  3. Comparison of typical mega cities in China using emergy synthesis

    NASA Astrophysics Data System (ADS)

    Zhang, L. X.; Chen, B.; Yang, Z. F.; Chen, G. Q.; Jiang, M. M.; Liu, G. Y.

    2009-06-01

    An emergy-based comparison analysis is conducted for three typical mega cities in China, i.e., Beijing, Shanghai and Guangzhou, from 1990 to 2005 in four perspectives including emergy intensity, resource structure, environmental pressure and resource use efficiency. A new index of non-renewable emergy/money ratio is established to indicate the utilization efficiency of the non-renewable resources. The results show that for the three mega urban systems, Beijing, Shanghai and Guangzhou, the total emergy inputs were 3.76E+23, 3.54E+23, 2.52E+23 sej in 2005, of which 64.88%, 91.45% and 72.28% were imported from the outsides, respectively. As to the indicators of emergy intensity involving the total emergy use, emergy density and emergy use per cap, three cities exhibited similar overall increase trends with annual fluctuations from 1990 to 2005. Shanghai achieved the highest level of economic development and non-renewable resource use efficiency, and meanwhile, lower proportion of renewable resource use and higher environmental pressure compared to those of Beijing and Guangzhou. Guangzhou has long term sustainability considering an amount of local renewable resources used, per capita emergy used, energy consumption per unit GDP and the ratio of waste to renewable emergy. It can be concluded that different emergy-based evaluation results arise from different geographical locations, resources endowments, industrial structures and urban orientations of the concerned mega cities.

  4. Collection methods and quality assessment for Esche-richia coli, water quality, and microbial source tracking data within Tumacácori National Historical Park and the upper Santa Cruz River, Arizona, 2015-16

    USGS Publications Warehouse

    Paretti, Nicholas; Coes, Alissa L.; Kephart, Christopher M.; Mayo, Justine

    2018-03-05

    Tumacácori National Historical Park protects the culturally important Mission, San José de Tumacácori, while also managing a portion of the ecologically diverse riparian corridor of the Santa Cruz River. This report describes the methods and quality assurance procedures used in the collection of water samples for the analysis of Escherichia coli (E. coli), microbial source tracking markers, suspended sediment, water-quality parameters, turbidity, and the data collection for discharge and stage; the process for data review and approval is also described. Finally, this report provides a quantitative assessment of the quality of the E. coli, microbial source tracking, and suspended sediment data.The data-quality assessment revealed that bias attributed to field and laboratory contamination was minimal, with E. coli detections in only 3 out of 33 field blank samples analyzed. Concentrations in the field blanks were several orders of magnitude lower than environmental concentrations. The microbial source tracking (MST) field blank was below the detection limit for all MST markers analyzed. Laboratory blanks for E. coli at the USGS Arizona Water Science Center and laboratory blanks for MST markers at the USGS Ohio Water Microbiology Laboratory were all below the detection limit. Irreplicate data for E. coli and suspended sediment indicated that bias was not introduced to the data by combining samples collected using discrete sampling methods with samples collected using automatic sampling methods.The split and sequential E. coli replicate data showed consistent analytical variability and a single equation was developed to explain the variability of E. coli concentrations. An additional analysis of analytical variability for E. coli indicated analytical variability around 18 percent relative standard deviation and no trend was observed in the concentration during the processing and analysis of multiple split-replicates. Two replicate samples were collected for MST and individual markers were compared for a base flow and flood sample. For the markers found in common between the two types of samples, the relative standard deviation for the base flow sample was more than 3 times greater than the markers in the flood sample. Sequential suspended sediment replicates had a relative standard deviation of about 1.3 percent, indicating that environmental and analytical variability was minimal.A holding time review and laboratory study analysis supported the extended holding times required for this investigation. Most concentrations for flood and base-flow samples were within the theoretical variability specified in the most probable number approach suggesting that extended hold times did not overly influence the final concentrations reported.

  5. Evaluation of a recent product to remove lipids and other matrix co-extractives in the analysis of pesticide residues and environmental contaminants in foods

    USDA-ARS?s Scientific Manuscript database

    This study demonstrates the application of a novel lipid removal product to the residue analysis of 65 pesticides and 52 environmental contaminants in kale, pork, salmon, and avocado by fast, low pressure gas chromatography – tandem mass spectrometry (LPGC-MS/MS). Sample preparation involves QuEChE...

  6. Regulatory requirements and tools for environmental assessment of hazardous wastes: Understanding tribal and stakeholder concerns using Department of Energy sites

    PubMed Central

    Burger, Joanna; Powers, Charles; Gochfeld, Michael

    2014-01-01

    Many US governmental and Tribal Nation agencies, as well as state and local entities, deal with hazardous wastes within regulatory frameworks that require specific environmental assessments. In this paper we use Department of Energy (DOE) sites as examples to examine the relationship between regulatory requirements and environmental assessments for hazardous waste sites and give special attention to how assessment tools differ. We consider federal laws associated with environmental protection include the National Environmental Policy Act (NEPA), the Resource Conservation and Recovery Act (RCRA), the Comprehensive Environmental Response Compensation and Liability Act (CERCLA), as well as regulations promulgated by the Nuclear Regulatory Commission, Tribal Nations and state agencies. These regulatory regimes require different types of environmental assessments and remedial investigations, dose assessments and contaminant pathways. The DOE case studies illustrate the following points: 1) there is often understandable confusion about what regulatory requirements apply to the site resources, and what environmental assessments are required by each, 2) the messages sent on site safety issued by different regulatory agencies are sometimes contradictory or confusing (e.g. Oak Ridge Reservation), 3) the regulatory frameworks being used to examine the same question can be different, leading to different conclusions (e.g. Brookhaven National Laboratory), 4) computer models used in support of groundwater models or risk assessments are not necessarily successful in convincing Native Americans and others that there is no possibility of risk from contaminants (e.g. Amchitka Island), 5) when given the opportunity to choose between relying on a screening risk assessments or waiting for a full site-specific analysis of contaminants in biota, the screening risk assessment option is rarely selected (e.g. Amchitka, Hanford Site), and finally, 6) there needs to be agreement on whether there has been adequate characterization to support the risk assessment (e.g. Hanford). The assessments need to be transparent and to accommodate different opinions about the relationship between characterizations and risk assessments. This paper illustrates how many of the problems at DOE sites, and potentially at other sites in the U.S. and elsewhere, derive from a lack of either understanding of, or consensus about, the regulatory process, including the timing and types of required characterizations and data in support of site characterizations and risk assessments. PMID:20719428

  7. 22 CFR 216.7 - Environmental impact statements.

    Code of Federal Regulations, 2013 CFR

    2013-04-01

    ... 22 Foreign Relations 1 2013-04-01 2013-04-01 false Environmental impact statements. 216.7 Section... Environmental impact statements. (a) Applicability. An Environmental Impact Statement shall be prepared when... nation (e.g., the oceans); (2) The environment of the United States; or (3) Other aspects of the...

  8. 22 CFR 216.7 - Environmental impact statements.

    Code of Federal Regulations, 2014 CFR

    2014-04-01

    ... 22 Foreign Relations 1 2014-04-01 2014-04-01 false Environmental impact statements. 216.7 Section... Environmental impact statements. (a) Applicability. An Environmental Impact Statement shall be prepared when... nation (e.g., the oceans); (2) The environment of the United States; or (3) Other aspects of the...

  9. 22 CFR 216.7 - Environmental impact statements.

    Code of Federal Regulations, 2012 CFR

    2012-04-01

    ... 22 Foreign Relations 1 2012-04-01 2012-04-01 false Environmental impact statements. 216.7 Section... Environmental impact statements. (a) Applicability. An Environmental Impact Statement shall be prepared when... nation (e.g., the oceans); (2) The environment of the United States; or (3) Other aspects of the...

  10. Association of Situational and Environmental Factors With Last Episode of Unprotected Anal Intercourse Among MSM in Hong Kong: A Case-Crossover Analysis.

    PubMed

    Lau, Joseph T F; Mo, Phoenix K H; Gu, Jing; Hao, Chun; Lai, CoCo H Y

    2016-02-01

    This study investigates event-specific factors that differentiate the last episodes of unprotected anal intercourse (UAI) from protected anal intercourse (PAI) with regular partner (RP) among 213 men who have sex with men (MSM) who did not use condoms consistently using case-crossover analysis. Factors positively associated with the last episode of UAI with RP included: two situational factors (i.e., participant's suggestion to have UAI, alcohol use) and three environmental/setting factors (i.e., sex took place overseas, during a weekday and not at home). Negative associations with an episode of UAI with RP included: five situational factors (i.e., discussion about condom use prior to sex, RP's suggestion to have PAI, participant's suggestion to have PAI, perception that RP would like to use a condom, participant's planning to use a condom) and two environmental/setting factors (i.e., condoms placed at the venue where sex took place, partner possessed a condom). Thus, these significant event-specific factors explained under which circumstances some MSM would use and would not use condoms during anal sex with RP.

  11. "Not easy at all but I am trying": barriers and facilitators to physical activity in a South African cohort of people living with HIV participating in a home-based pedometer walking programme.

    PubMed

    Roos, Ronel; Myezwa, Hellen; van Aswegen, Helena

    2015-01-01

    The promotion of physical activity is encouraged in people living with HIV and AIDS (PLWHA) as a means of promoting wellness and health. Adherence to programmes that promote exercise is often reduced, and home-based programmes are suggested to improve adherence. This study investigated the personal and environmental factors that cause barriers and facilitators of physical activity in a home-based pedometer walking programme as a means of highlighting adherence challenges. An observational study nested in a randomised controlled trial was conducted in a cohort of South African PLWHA on antiretroviral therapy over a six-month period. Descriptive analysis and qualitative content analysis of 42 participants who underwent physical activity modification assisted with data review. The mean age of the sample was 38.7 (±8.9) years, consisted mostly of women (n = 35; 83.3%) who were employed (n = 19; 45.2%) but earning very little (less than R500 per month) and often single or widowed (n = 23; 54.8%). Barriers to physical activity identified included physical complaints, e.g., low-energy levels; psychological complaints, e.g., stress levels; family responsibility, e.g., being primary caregivers; the physical environment, e.g., adverse weather conditions; social environment, e.g., domestic abuse and crime; and workplace, e.g., being in a sedentary job. Facilitators of physical activity included support and encouragement from friends and family, religious practices during worship and community environment, e.g., having access to parks and sport fields. The study is of benefit as it highlights personal and environmental factors that need to be considered when developing or implementing a home-based walking programme in PLWHA.

  12. Dealing with fixed emissions ceilings in an uncertain future: Offsetting under environmental integrity.

    PubMed

    Wagner, Fabian; Schöpp, Wolfgang; Amann, Markus

    2013-11-15

    National emission ceilings are a policy instrument to reduce adverse environmental impacts of transboundary air pollution. Such ceilings for SO2, NOx, NH3 and VOC are established, for example, in the Gothenburg Protocol of the Convention on Long-range Transboundary Air Pollution (UNECE, 1999) and the National Emission Ceilings (NEC) Directive of the European Union (EC, 2001a, b). They prescribe for each pollutant a fixed upper limit on emissions for a specific year. Flexibility in achieving them could lower implementation costs if reality develops differently from what was foreseen during negotiations. In this paper, we explore the conditions under which emission reductions for one pollutant (e.g., SO2) could be offset by additional cuts of another pollutant (e.g., NOx) within the same country, without compromising the environmental improvements that are envisaged from the original set of emission ceilings. We employ the impact module of the GAINS (Greenhouse gas - Air pollution Interactions and Synergies) model to examine possible exchange rates across pollutants for the 2012 negotiations on the revision of the Gothenburg Protocol in Europe. Our analysis shows that exchange rates that satisfy the environmental integrity condition can be established, but that their values vary substantially across countries. Extending the environmental integrity condition to downwind countries will require significantly higher exchange rates. We discuss aspects that decision makers would need to consider before adopting an offsetting schema for future international environmental agreements. Copyright © 2013 Elsevier Ltd. All rights reserved.

  13. A novel approach for soil contamination assessment from heavy metal pollution: a linkage between discharge and adsorption.

    PubMed

    Dong, Xiaoqing; Li, Chaolin; Li, Ji; Wang, Jiaxin; Liu, Suting; Ye, Bin

    2010-03-15

    Soil protection from heavy metal contamination requires scientific assessment on the linkage between site-specific pollutant discharge and environmental effects. However, this kind of linkage is usually disregarded due to the lack of assessment tools in environmental policies, e.g., some developed coastal cities in China have forced their highly polluting industries out to less developed interior areas without consideration of the impacts from pollution transfer. This paper developed a soil adsorption fraction (SAF) model to characterize the emissions-to-adsorption relationship between heavy metal emission and the adsorption by soil. Case studies were carried out for two adjacent southern cities in China, i.e., Guangzhou and Shaoguan. The results indicated that the average SAF of cadmium was 5.38 x 10(-3) for Shaoguan and 1.28 x 10(-3) for Guangzhou, i.e., cadmium released from Shaoguan threatened the soil environment 4.2 times of that from Guangzhou. Further analysis showed the polluting pathway and abundance of water resources were the main influencing factors on SAF. Soil contamination will be exaggerated by relocating heavy metal polluting industries from coastal areas to interior areas. The results should be useful to prompt site-specific policies on heavy metal pollution control. (c) 2009 Elsevier B.V. All rights reserved.

  14. Comparison of the Defense Meteorological Satellite Program (DMSP) and the NOAA Polar-Orbiting Operational Environmental Satellite (POES) Program,

    DTIC Science & Technology

    1985-10-01

    grid points on 1 /20 lat /long meshI 4 c. SST global scale analysis ( 1 or 100 km lat /long grid) .. d. SST climatic scale analysis (50 or 500 km lat ...long grid) e. SST monthly means (2 1 /20 or 250 km lat /long grid) 3. Analog Sea Surface Temperature Product Set ’-%". V" " a. GOSSTCOMP charts - weekly...Mercator contour charts, each a ., 500 by 500 lat /long segment, 1 °C contour interval b. Regional charts - set of three charts covering the U.S

  15. E3 Sustainable Manufacturing Curriculum

    EPA Pesticide Factsheets

    A short E3 course containing three modules on Environmental Sustainability; Lean Manufacturing and Pollution Prevention; and Energy and Carbon. Each module includes slides, a facilitator's guide with handouts, activities, quizzes, and facilitator's notes.

  16. CONVERGENT TRANSCRIPTOMICS AND PROTEOMICS OF ENVIRONMENTAL ENRICHMENT AND COCAINE IDENTIFIES NOVEL THERAPEUTIC STRATEGIES FOR ADDICTION

    PubMed Central

    ZHANG, YAFANG; CROFTON, ELIZABETH J.; FAN, XIUZHEN; LI, DINGGE; KONG, FANPING; SINHA, MALA; LUXON, BRUCE A.; SPRATT, HEIDI M.; LICHTI, CHERYL F.; GREEN, THOMAS A.

    2016-01-01

    Transcriptomic and proteomic approaches have separately proven effective at identifying novel mechanisms affecting addiction-related behavior; however, it is difficult to prioritize the many promising leads from each approach. A convergent secondary analysis of proteomic and transcriptomic results can glean additional information to help prioritize promising leads. The current study is a secondary analysis of the convergence of recently published separate transcriptomic and proteomic analyses of nucleus accumbens (NAc) tissue from rats subjected to environmental enrichment vs. isolation and cocaine self-administration vs. saline. Multiple bioinformatics approaches (e.g. Gene Ontology (GO) analysis, Ingenuity Pathway Analysis (IPA), and Gene Set Enrichment Analysis (GSEA)) were used to interrogate these rich data sets. Although there was little correspondence between mRNA vs. protein at the individual target level, good correspondence was found at the level of gene/protein sets, particularly for the environmental enrichment manipulation. These data identify gene sets where there is a positive relationship between changes in mRNA and protein (e.g. glycolysis, ATP synthesis, translation elongation factor activity, etc.) and gene sets where there is an inverse relationship (e.g. ribosomes, Rho GTPase signaling, protein ubiquitination, etc.). Overall environmental enrichment produced better correspondence than cocaine self-administration. The individual targets contributing to mRNA and protein effects were largely not overlapping. As a whole, these results confirm that robust transcriptomic and proteomic data sets can provide similar results at the gene/protein set level even when there is little correspondence at the individual target level and little overlap in the targets contributing to the effects. PMID:27717806

  17. Immune response induced by major environmental pollutants through altering neutrophils in zebrafish larvae.

    PubMed

    Xu, Hongyan; Zhang, Xiaoyan; Li, Hankun; Li, Caixia; Huo, Xiao-Jing; Hou, Li-Ping; Gong, Zhiyuan

    2018-06-06

    Environmental pollutants may cause adverse effects on the immune system of aquatic organisms. However, the cellular effects of pollutants on fish immune system are largely unknown. Here, we exploited the transgenic zebrafish Tg(lysC:DsRed2) larva as a preliminary screening system to evaluate the potential inflammatory effects of environmental pollutants. Tg(lysC:DsRED2) larvae aged 7-day-postfertilization (7 dpf) were treated with selected environmental chemicals for 24 h (24 h) and the number of neutrophils were quantified using both image analysis and fluorescence activated cell sorting (FACS). We found that the numbers of neutrophils in the Tg(lysC:DsRED2) larvae were significantly increased by most of the organic chemicals tested, including E2 (17β-estradiol), BPA (Bisphenol-A), NDEA (N-nitrosodiethylamine), 4-NP (4-Nitrophenol) and Lindane (γ-hexachlorocyclohexane). Neutrophil numbers were also increased by all the metals tested (Na2HAsO4· 7H2O, Pb(NO3)2, HgCl 2 , CdCl2, CuSO 4 ·5H 2 O, ZnSO4, and K2Cr2O7). The only exception was TCDD (2,3,7,8-tetrachlorodibenzo-p-dioxin), which significantly reduced the number of neutrophils after exposure. Additionally, the transcription of genes (lyz, mpo, tnfα and il8) related to fish immune system were significantly modulated upon exposure to some of the selected chemicals such as E2, TCDD, Cu and Cd. This study revealed that representatives of major categories of environmental pollutants could cause an acute inflammatory response in zebrafish larvae as shown by alterations in the neutrophils, which may imply a common immunotoxicity mechanism for most environmental pollutants. This study has also demonstrated that Tg(lyz:DsRed2) transgenic zebrafish is an excellent tool for screening environmental chemicals with potential inflammatory effects through FACS-facilitated neutrophil counting. Copyright © 2018 Elsevier B.V. All rights reserved.

  18. Final Environmental Assessment for the Disposal of the Former Lynn Haven Fuel Depot, Tyndall Air Force Base, Florida

    DTIC Science & Technology

    2015-12-01

    groundwater), infrastructure/utilities (i.e., sanitary sewer, potable water, solid waste management, drainage, transportation systems, electricity and...on water resources (i.e., surface water and groundwater), infrastructure/utilities (i.e., sanitary sewer, potable water, solid waste management...3-8 3.3.6.4 Sanitary Sewer

  19. Diverse Applications of Environmental DNA Methods in Parasitology.

    PubMed

    Bass, David; Stentiford, Grant D; Littlewood, D T J; Hartikainen, Hanna

    2015-10-01

    Nucleic acid extraction and sequencing of genes from organisms within environmental samples encompasses a variety of techniques collectively referred to as environmental DNA or 'eDNA'. The key advantages of eDNA analysis include the detection of cryptic or otherwise elusive organisms, large-scale sampling with fewer biases than specimen-based methods, and generation of data for molecular systematics. These are particularly relevant for parasitology because parasites can be difficult to locate and are morphologically intractable and genetically divergent. However, parasites have rarely been the focus of eDNA studies. Focusing on eukaryote parasites, we review the increasing diversity of the 'eDNA toolbox'. Combining eDNA methods with complementary tools offers much potential to understand parasite communities, disease risk, and parasite roles in broader ecosystem processes such as food web structuring and community assembly. Crown Copyright © 2015. Published by Elsevier Ltd. All rights reserved.

  20. Environmental Impact Analysis Process. Draft Environmental Assessment. SAC Low-Altitude Flight Operations at the Airburst Range, Colorado

    DTIC Science & Technology

    1990-01-01

    Aircraft Descriptions Appendix D- Practice Munitions Appendix E : B-52/BDU-48 Drop Activities Appendix F: Definition of Noise Impacts Appendix G: Contact...in southcentral Colorado. 1.1 PURPOSE AN’) NEED 1.1.1 Low-Level Training Low-altitude flight operations a.- e essential to the Air Forec for a...strategic and tactical bombing, and strategic/t’. "cal air!*-".. Aircre,-, 91 (ct y is e nti" if the Air Force is to perform its assigned mission

  1. Eco-efficiency for greenhouse gas emissions mitigation of municipal solid waste management: a case study of Tianjin, China.

    PubMed

    Zhao, Wei; Huppes, Gjalt; van der Voet, Ester

    2011-06-01

    The issue of municipal solid waste (MSW) management has been highlighted in China due to the continually increasing MSW volumes being generated and the limited capacity of waste treatment facilities. This article presents a quantitative eco-efficiency (E/E) analysis on MSW management in terms of greenhouse gas (GHG) mitigation. A methodology for E/E analysis has been proposed, with an emphasis on the consistent integration of life cycle assessment (LCA) and life cycle costing (LCC). The environmental and economic impacts derived from LCA and LCC have been normalized and defined as a quantitative E/E indicator. The proposed method was applied in a case study of Tianjin, China. The study assessed the current MSW management system, as well as a set of alternative scenarios, to investigate trade-offs between economy and GHG emissions mitigation. Additionally, contribution analysis was conducted on both LCA and LCC to identify key issues driving environmental and economic impacts. The results show that the current Tianjin's MSW management system emits the highest GHG and costs the least, whereas the situation reverses in the integrated scenario. The key issues identified by the contribution analysis show no linear relationship between the global warming impact and the cost impact in MSW management system. The landfill gas utilization scenario is indicated as a potential optimum scenario by the proposed E/E analysis, given the characteristics of MSW, technology levels, and chosen methodologies. The E/E analysis provides an attractive direction towards sustainable waste management, though some questions with respect to uncertainty need to be discussed further. Copyright © 2011 Elsevier Ltd. All rights reserved.

  2. Evaluation of a new carbon/zirconia-based sorbent for the cleanup of food extracts in multiclass analysis of pesticides and environmental contaminants

    USDA-ARS?s Scientific Manuscript database

    A novel carbon/zirconia based material, SupelTM QuE Verde (Verde), was evaluated in a filter-vial dispersive solid phase extraction (d-SPE) cleanup of QuEChERS extracts of pork, salmon, kale, and avocado for residual analysis of pesticides and environmental contaminants. Low pressure (LP) GC-MS/MS w...

  3. A systematic review of methodology: time series regression analysis for environmental factors and infectious diseases.

    PubMed

    Imai, Chisato; Hashizume, Masahiro

    2015-03-01

    Time series analysis is suitable for investigations of relatively direct and short-term effects of exposures on outcomes. In environmental epidemiology studies, this method has been one of the standard approaches to assess impacts of environmental factors on acute non-infectious diseases (e.g. cardiovascular deaths), with conventionally generalized linear or additive models (GLM and GAM). However, the same analysis practices are often observed with infectious diseases despite of the substantial differences from non-infectious diseases that may result in analytical challenges. Following the Preferred Reporting Items for Systematic Reviews and Meta-Analyses guidelines, systematic review was conducted to elucidate important issues in assessing the associations between environmental factors and infectious diseases using time series analysis with GLM and GAM. Published studies on the associations between weather factors and malaria, cholera, dengue, and influenza were targeted. Our review raised issues regarding the estimation of susceptible population and exposure lag times, the adequacy of seasonal adjustments, the presence of strong autocorrelations, and the lack of a smaller observation time unit of outcomes (i.e. daily data). These concerns may be attributable to features specific to infectious diseases, such as transmission among individuals and complicated causal mechanisms. The consequence of not taking adequate measures to address these issues is distortion of the appropriate risk quantifications of exposures factors. Future studies should pay careful attention to details and examine alternative models or methods that improve studies using time series regression analysis for environmental determinants of infectious diseases.

  4. Accidents of Electrical and Mechanical Works for Public Sector Projects in Hong Kong.

    PubMed

    Wong, Francis K W; Chan, Albert P C; Wong, Andy K D; Hon, Carol K H; Choi, Tracy N Y

    2018-03-10

    A study on electrical and mechanical (E&M) works-related accidents for public sector projects provided the opportunity to gain a better understanding of the causes of accidents by analyzing the circumstances of all E&M works accidents. The research aims to examine accidents of E&M works which happened in public sector projects. A total of 421 E&M works-related accidents in the "Public Works Programme Construction Site Safety and Environmental Statistics" (PCSES) system were extracted for analysis. Two-step cluster analysis was conducted to classify the E&M accidents into different groups. The results identified three E&M accidents groups: (1) electricians with over 15 years of experience were prone to 'fall of person from height'; (2) electricians with zero to five years of experience were prone to 'slip, trip or fall on same level'; (3) air-conditioning workers with zero to five years of experience were prone to multiple types of accidents. Practical measures were recommended for each specific cluster group to avoid recurrence of similar accidents. The accident analysis would be vital for industry practitioners to enhance the safety performance of public sector projects. This study contributes to filling the knowledge gap of how and why E&M accidents occur and promulgating preventive measures for E&M accidents which have been under researched.

  5. Accidents of Electrical and Mechanical Works for Public Sector Projects in Hong Kong

    PubMed Central

    Wong, Francis K. W.; Chan, Albert P. C.; Wong, Andy K. D.; Choi, Tracy N. Y.

    2018-01-01

    A study on electrical and mechanical (E&M) works-related accidents for public sector projects provided the opportunity to gain a better understanding of the causes of accidents by analyzing the circumstances of all E&M works accidents. The research aims to examine accidents of E&M works which happened in public sector projects. A total of 421 E&M works-related accidents in the “Public Works Programme Construction Site Safety and Environmental Statistics” (PCSES) system were extracted for analysis. Two-step cluster analysis was conducted to classify the E&M accidents into different groups. The results identified three E&M accidents groups: (1) electricians with over 15 years of experience were prone to ‘fall of person from height’; (2) electricians with zero to five years of experience were prone to ‘slip, trip or fall on same level’; (3) air-conditioning workers with zero to five years of experience were prone to multiple types of accidents. Practical measures were recommended for each specific cluster group to avoid recurrence of similar accidents. The accident analysis would be vital for industry practitioners to enhance the safety performance of public sector projects. This study contributes to filling the knowledge gap of how and why E&M accidents occur and promulgating preventive measures for E&M accidents which have been under researched. PMID:29534429

  6. Fingerprints of resistant Escherichia coli O157:H7 from vegetables and environmental samples.

    PubMed

    Abakpa, Grace Onyukwo; Umoh, Veronica J; Kamaruzaman, Sijam; Ibekwe, Mark

    2018-01-01

    Some routes of transmission of Escherichia coli O157:H7 to fresh produce include contaminated irrigation water and manure polluted soils. The aim of the present study was to determine the genetic relationships of E. coli O157:H7 isolated from some produce growing region in Nigeria using enterobacterial repetitive intergenic consensus (ERIC) DNA fingerprinting analysis. A total of 440 samples comprising leafy greens, irrigation water, manure and soil were obtained from vegetable producing regions in Kano and Plateau States, Nigeria. Genes coding for the quinolone resistance-determinant (gyrA) and plasmid (pCT) coding for multidrug resistance (MDR) were determined using polymerase chain reaction (PCR) in 16 isolates that showed MDR. Cluster analysis of the ERIC-PCR profiles based on band sizes revealed six main clusters from the sixteen isolates analysed. The largest cluster (cluster 3) grouped isolates from vegetables and manure at a similarity coefficient of 0.72. The present study provides data that support the potential transmission of resistant strains of E. coli O157:H7 from vegetables and environmental sources to humans with potential public health implications, especially in developing countries. © 2017 Society of Chemical Industry. © 2017 Society of Chemical Industry.

  7. 49 CFR 1244.9 - Procedures for the release of waybill data.

    Code of Federal Regulations, 2011 CFR

    2011-10-01

    ... Director of the Office of Economics, Environmental Analysis, and Administration shall be responsible for... Board's Office of Economics, Environmental Analysis, and Administration. (3) Objections to release. (i... copies of each objection shall be filed with the Director, Office of Economics, Environmental Analysis...

  8. 49 CFR 1244.9 - Procedures for the release of waybill data.

    Code of Federal Regulations, 2014 CFR

    2014-10-01

    ... Director of the Office of Economics, Environmental Analysis, and Administration shall be responsible for... Board's Office of Economics, Environmental Analysis, and Administration. (3) Objections to release. (i... copies of each objection shall be filed with the Director, Office of Economics, Environmental Analysis...

  9. 49 CFR 1244.9 - Procedures for the release of waybill data.

    Code of Federal Regulations, 2013 CFR

    2013-10-01

    ... Director of the Office of Economics, Environmental Analysis, and Administration shall be responsible for... Board's Office of Economics, Environmental Analysis, and Administration. (3) Objections to release. (i... copies of each objection shall be filed with the Director, Office of Economics, Environmental Analysis...

  10. 49 CFR 1244.9 - Procedures for the release of waybill data.

    Code of Federal Regulations, 2012 CFR

    2012-10-01

    ... Director of the Office of Economics, Environmental Analysis, and Administration shall be responsible for... Board's Office of Economics, Environmental Analysis, and Administration. (3) Objections to release. (i... copies of each objection shall be filed with the Director, Office of Economics, Environmental Analysis...

  11. 49 CFR 1244.9 - Procedures for the release of waybill data.

    Code of Federal Regulations, 2010 CFR

    2010-10-01

    ... Director of the Office of Economics, Environmental Analysis, and Administration shall be responsible for... Board's Office of Economics, Environmental Analysis, and Administration. (3) Objections to release. (i... copies of each objection shall be filed with the Director, Office of Economics, Environmental Analysis...

  12. Comparison of sampling methods used for MRSA-classification of herds with breeding pigs.

    PubMed

    Broens, E M; Graat, E A M; Engel, B; van Oosterom, R A A; van de Giessen, A W; van der Wolf, P J

    2011-01-27

    Since the first report on methicillin resistant Staphylococcus aureus (MRSA) CC398 in pigs, several countries have determined the prevalence of MRSA-positive pig herds using different sampling and laboratory techniques. The objective of the study was to compare three sampling methods for MRSA-classification of herds. Therefore, nasal swabs of pigs and environmental wipes were collected from 147 herds with breeding pigs. Per herd, laboratory examination was done on 10 pools of 6 nasal swabs (NASAL), 5 single environmental wipes (ENVSINGLE) and one pool of 5 environmental wipes (ENVPOOL). Large differences in apparent prevalence of MRSA-positive herds between methods were found: 19.1% for ENVPOOL, 53.1% for ENVSINGLE, and 70.8% for NASAL. Pairwise comparisons of methods resulted in relative sensitivities of 26.9% (ENVPOOL vs. NASAL), 34.6% (ENVPOOL vs. ENVSINGLE), and 72.1% (ENVSINGLE vs. NASAL) with relative specificities of respectively 100%, 98.6% and 93.0%. Cohen's kappa was respectively 0.18, 0.32 and 0.55, thus varying between very poor and moderate agreement. Examination of environmental wipes is an easy and non-invasive method to classify herds for MRSA. The number of environmental wipes needed depends on e.g. required detection limits and within-herd prevalence. In low prevalent herds (e.g. herds with <3 positive pools of nasal swabs), 25 single environmental wipes are required to be 90% sure that MRSA is detected at a detection limit similar to analyzing 10 pools of nasal swabs. Individual analysis of environmental wipes is highly recommended, as pooling 5 environmental samples resulted in a substantial reduction of the apparent prevalence. Copyright © 2010 Elsevier B.V. All rights reserved.

  13. Comparison of the environmental footprint of the egg industry in the United States in 1960 and 2010.

    PubMed

    Pelletier, Nathan; Ibarburu, Maro; Xin, Hongwei

    2014-02-01

    The US egg industry has evolved considerably over recent decades by incorporating new technologies and production practices. To date, there has been no comprehensive assessment of the resource demand and environmental effects of these changes. This study quantifies the environmental footprint of egg production supply chains in the United States for 2010 compared with 1960 using life cycle assessment. The analysis considers changes in both foreground (e.g., hen production performance) and background (e.g., efficiencies of energy provision, fertilizer production, production of feed inputs, and transport modes) system variables. The results revealed that feed efficiency, feed composition, and manure management are the 3 primary factors that determine the environmental impacts of US egg production. Further research and improvements in these areas will aid in continual reduction of the environmental footprint of the US egg industry over time. Per kilogram of eggs produced, the environmental footprint for 2010 is 65% lower in acidifying emissions, 71% lower in eutrophying emissions, 71% lower in greenhouse gas emissions, and 31% lower in cumulative energy demand compared with 1960. Table egg production was 30% higher in 2010; however, the total environmental footprint was 54% lower in acidifying emissions, 63% lower in eutrophying emissions, 63% lower in greenhouse gas emissions, and 13% lower in cumulative energy demand compared with 1960. Reductions in the environmental footprint over the 50-yr interval considered can be attributed to the following: 27 to 30% due to improved efficiencies of background systems, which outweighed the declining energy return on energy invested for primary energy sources; 30 to 44% due to changes in feed composition; and 28 to 43% due to improved bird performance.

  14. Comparison of the environmental footprint of the egg industry in the United States in 1960 and 20101

    PubMed Central

    Pelletier, Nathan; Ibarburu, Maro; Xin, Hongwei

    2014-01-01

    The US egg industry has evolved considerably over recent decades by incorporating new technologies and production practices. To date, there has been no comprehensive assessment of the resource demand and environmental effects of these changes. This study quantifies the environmental footprint of egg production supply chains in the United States for 2010 compared with 1960 using life cycle assessment. The analysis considers changes in both foreground (e.g., hen production performance) and background (e.g., efficiencies of energy provision, fertilizer production, production of feed inputs, and transport modes) system variables. The results revealed that feed efficiency, feed composition, and manure management are the 3 primary factors that determine the environmental impacts of US egg production. Further research and improvements in these areas will aid in continual reduction of the environmental footprint of the US egg industry over time. Per kilogram of eggs produced, the environmental footprint for 2010 is 65% lower in acidifying emissions, 71% lower in eutrophying emissions, 71% lower in greenhouse gas emissions, and 31% lower in cumulative energy demand compared with 1960. Table egg production was 30% higher in 2010; however, the total environmental footprint was 54% lower in acidifying emissions, 63% lower in eutrophying emissions, 63% lower in greenhouse gas emissions, and 13% lower in cumulative energy demand compared with 1960. Reductions in the environmental footprint over the 50-yr interval considered can be attributed to the following: 27 to 30% due to improved efficiencies of background systems, which outweighed the declining energy return on energy invested for primary energy sources; 30 to 44% due to changes in feed composition; and 28 to 43% due to improved bird performance. PMID:24570445

  15. Cyberinfrastructure for End-to-End Environmental Explorations

    NASA Astrophysics Data System (ADS)

    Merwade, V.; Kumar, S.; Song, C.; Zhao, L.; Govindaraju, R.; Niyogi, D.

    2007-12-01

    The design and implementation of a cyberinfrastructure for End-to-End Environmental Exploration (C4E4) is presented. The C4E4 framework addresses the need for an integrated data/computation platform for studying broad environmental impacts by combining heterogeneous data resources with state-of-the-art modeling and visualization tools. With Purdue being a TeraGrid Resource Provider, C4E4 builds on top of the Purdue TeraGrid data management system and Grid resources, and integrates them through a service-oriented workflow system. It allows researchers to construct environmental workflows for data discovery, access, transformation, modeling, and visualization. Using the C4E4 framework, we have implemented an end-to-end SWAT simulation and analysis workflow that connects our TeraGrid data and computation resources. It enables researchers to conduct comprehensive studies on the impact of land management practices in the St. Joseph watershed using data from various sources in hydrologic, atmospheric, agricultural, and other related disciplines.

  16. Free ammonia pre-treatment of secondary sludge significantly increases anaerobic methane production.

    PubMed

    Wei, Wei; Zhou, Xu; Wang, Dongbo; Sun, Jing; Wang, Qilin

    2017-07-01

    Energy recovery in the form of methane from sludge/wastewater is restricted by the poor and slow biodegradability of secondary sludge. An innovative pre-treatment technology using free ammonia (FA, i.e. NH 3 ) was proposed in this study to increase anaerobic methane production. The solubilisation of secondary sludge was significantly increased after FA pre-treatment at up to 680 mg NH 3 -N/L for 1 day, under which the solubilisation (i.e. 0.4 mg SCOD/mg VS; SCOD: soluble chemical oxygen demand; VS: volatile solids) was >10 times higher than that without FA pre-treatment (i.e. 0.03 mg SCOD/mg VS). Biochemical methane potential assays showed that FA pre-treatment at above 250 mg NH 3 -N/L is effective in improving anaerobic methane production. The highest improvement in biochemical methane potential (B 0 ) and hydrolysis rate (k) was achieved at FA concentrations of 420-680 mg NH 3 -N/L, and was determined as approximately 22% (from 160 to 195 L CH 4 /kg VS added) and 140% (from 0.22 to 0.53 d -1 ) compared to the secondary sludge without pre-treatment. More analysis revealed that the FA induced improvement in B 0 and k could be attributed to the rapidly biodegradable substances rather than the slowly biodegradable substances. Economic and environmental analyses showed that the FA-based technology is economically favourable and environmentally friendly. Since this FA technology aims to use the wastewater treatment plants (WWTPs) waste (i.e. anaerobic digestion liquor) to enhance methane production from the WWTPs, it will set an example for the paradigm shift of the WWTPs from 'linear economy' to 'circular economy'. Copyright © 2017 Elsevier Ltd. All rights reserved.

  17. Life cycle assessment study of a Chinese desktop personal computer.

    PubMed

    Duan, Huabo; Eugster, Martin; Hischier, Roland; Streicher-Porte, Martin; Li, Jinhui

    2009-02-15

    Associated with the tremendous prosperity in world electronic information and telecommunication industry, there continues to be an increasing awareness of the environmental impacts related to the accelerating mass production, electricity use, and waste management of electronic and electric products (e-products). China's importance as both a consumer and supplier of e-products has grown at an unprecedented pace in recent decade. Hence, this paper aims to describe the application of life cycle assessment (LCA) to investigate the environmental performance of Chinese e-products from a global level. A desktop personal computer system has been selected to carry out a detailed and modular LCA which follows the ISO 14040 series. The LCA is constructed by SimaPro software version 7.0 and expressed with the Eco-indicator'99 life cycle impact assessment method. For a sensitivity analysis of the overall LCA results, the so-called CML method is used in order to estimate the influence of the choice of the assessment method on the result. Life cycle inventory information is complied by ecoinvent 1.3 databases, combined with literature and field investigations on the present Chinese situation. The established LCA study shows that that the manufacturing and the use of such devices are of the highest environmental importance. In the manufacturing of such devices, the integrated circuits (ICs) and the Liquid Crystal Display (LCD) are those parts contributing most to the impact. As no other aspects are taken into account during the use phase, the impact is due to the way how the electricity is produced. The final process steps--i.e. the end of life phase--lead to a clear environmental benefit if a formal and modern, up-to-date technical system is assumed, like here in this study.

  18. Sensitive immunoassay detection of multiple environmental chemicals on protein microarrays using DNA/dye conjugate as a fluorescent label.

    PubMed

    Fan, Ziyan; Keum, Young Soo; Li, Qing X; Shelver, Weilin L; Guo, Liang-Hong

    2012-05-01

    Indirect competitive immunoassays were developed on protein microarrays for the sensitive and simultaneous detection of multiple environmental chemicals in one sample. In this assay, a DNA/SYTOX Orange conjugate was employed as an antibody label to increase the fluorescence signal and sensitivity of the immunoassays. Epoxy-modified glass slides were selected as the substrate for the production of 4 × 4 coating antigen microarrays. With this signal-enhancing system, competition curves for 17β-estradiol (E2), benzo[a]pyrene (BaP) and 2,2',4,4'-tetrabromodiphenyl ether (BDE-47) were obtained individually on the protein microarray. The IC(50) and calculated limit of detection (LOD) are 0.32 μg L(-1) and 0.022 μg L(-1) for E2, 37.2 μg L(-1) and 24.5 μg L(-1) for BaP, and 31.6 μg L(-1) and 2.8 μg L(-1) for BDE-47, respectively. LOD of E2 is 14-fold lower than the value reported in a previous study using Cy3 labeled antibody (Du et al., Clin. Chem, 2005, 51, 368-375). The results of the microarray immunoassay were within 15% of chromatographic analysis for all three pollutants in spiked river water samples, thus verifying the immunoassay. Simultaneous detection of E2, BaP and BDE-47 in one sample was demonstrated. There was no cross-reaction in the immunoassay between these three environmental chemicals. These results suggest that microarray-based immunoassays with DNA/dye conjugate labels are useful tools for the rapid, sensitive, and high throughput screening of multiple environmental contaminants.

  19. 43 CFR 3430.3-2 - Environmental analysis.

    Code of Federal Regulations, 2012 CFR

    2012-10-01

    ... Juan Regional Coal Environmental Impact Statement (March 1984), the Savery Coal EIS (July 1983), and... impact statement on the application. (b) The environmental analysis may be conducted in conjunction with and included as part of the environmental impact statement required for coal activity planning under...

  20. 43 CFR 3430.3-2 - Environmental analysis.

    Code of Federal Regulations, 2014 CFR

    2014-10-01

    ... Juan Regional Coal Environmental Impact Statement (March 1984), the Savery Coal EIS (July 1983), and... impact statement on the application. (b) The environmental analysis may be conducted in conjunction with and included as part of the environmental impact statement required for coal activity planning under...

  1. 43 CFR 3430.3-2 - Environmental analysis.

    Code of Federal Regulations, 2013 CFR

    2013-10-01

    ... Juan Regional Coal Environmental Impact Statement (March 1984), the Savery Coal EIS (July 1983), and... impact statement on the application. (b) The environmental analysis may be conducted in conjunction with and included as part of the environmental impact statement required for coal activity planning under...

  2. Systematic characterization of generation and management of e-waste in China.

    PubMed

    Duan, Huabo; Hu, Jiukun; Tan, Quanyin; Liu, Lili; Wang, Yanjie; Li, Jinhui

    2016-01-01

    Over the last decade, there has been much effort to promote the management of e-waste in China. Policies have been affected to prohibit imports and to control pollution. Research has been conducted in laboratories and on large-scale industrial operations. A subsidy system to support sound e-waste recycling has been put in place. However, the handling of e-waste is still a concern in China and the issue remains unresolved. There has been relatively little work to follow up this issue or to interpret continuing problems from the perspective of sustainable development. This paper first provides a brief overview of conventional and emerging environmental pollution in Chinese "famous" e-waste dismantling areas, including Guiyu in Guangdong and Wenling in Zhejiang. Environmentalists have repeatedly proven that these areas are significantly polluted. Importing and backyard recycling are decreasing but are ongoing. Most importantly, no work is being done to treat or remediate the contaminated environmental media. The situation is exacerbated by the rising tide of e-waste generated by domestic update of various electronics. This study, therefore, employs a Sales Obsolescence Model approach to predict the generation of e-waste. When accounting for weight, approximately 8 million tons of e-waste will be generated domestically in 2015, of which around 50% is ferrous metals, followed by miscellaneous plastic (30%), copper metal and cables (8%), aluminum (5%), and others (7%). Of this, 3.6% will come from scrap PCBs and 0.2% from lead CRT glass. While more and more end-of-life electronics have been collected and treated by formal or licensed recyclers in China in terms of our analysis, many of them only have dismantling and separation activities. Hazardous e-wastes, including those from PCBs, CRT glass, and brominated flame retardant (BFR) plastics, have become problematic and probably flow to small or backyard recyclers without environmentally sound management. Traditional technologies are still being used to recover precious metals--such as cyanide method of gold hydrometallurgy--from e-waste. While recovery rates of precious metals from e-waste are above 50%, it has encountered some challenges from environmental considerations. Worse, many critical metals contained in e-waste are lost because the recovery rates are less than 1%. On the other hand, this implies that there is opportunity to develop the urban mine of the critical metals from e-waste.

  3. Intraspecific variation in juvenile tree growth under elevated CO2 alone and with O3: a meta-analysis.

    PubMed

    Resco de Dios, Víctor; Mereed, Tessema E; Ferrio, Juan Pedro; Tissue, David T; Voltas, Jordi

    2016-06-01

    Atmospheric carbon dioxide (CO2) concentrations are expected to increase throughout this century, potentially fostering tree growth. A wealth of studies have examined the variation in CO2 responses across tree species, but the extent of intraspecific variation in response to elevated CO2 (eCO2) has, so far, been examined in individual studies and syntheses of published work are currently lacking. We conducted a meta-analysis on the effects of eCO2 on tree growth (height, stem biomass and stem volume) and photosynthesis across genotypes to examine whether there is genetic variation in growth responses to eCO2 and to understand their dependence on photosynthesis. We additionally examined the interaction between the responses to eCO2 and ozone (O3), another global change agent. Most of the published studies so far have been conducted in juveniles and in Populus spp., although the patterns observed were not species dependent. All but one study reported significant genetic variation in stem biomass, and the magnitude of intraspecific variation in response to eCO2 was similar in magnitude to previous analyses on interspecific variation. Growth at eCO2 was predictable from growth at ambient CO2 (R(2) = 0.60), and relative rankings of genotype performance were preserved across CO2 levels, indicating no significant interaction between genotypic and environmental effects. The growth response to eCO2 was not correlated with the response of photosynthesis (P > 0.1), and while we observed 57.7% average increases in leaf photosynthesis, stem biomass and volume increased by 36 and 38.5%, respectively, and height only increased by 9.5%, suggesting a predominant role for carbon allocation in ultimately driving the response to eCO2 Finally, best-performing genotypes under eCO2 also responded better under eCO2 and elevated O3 Further research needs include widening the study of intraspecific variation beyond the genus Populus and examining the interaction between eCO2 and other environmental stressors. We conclude that significant potential to foster CO2-induced productivity gains through tree breeding exists, that these programs could be based upon best-performing genotypes under ambient conditions and that they would benefit from an increased understanding on the controls of allocation. © The Author 2016. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

  4. Physiological Evaluation of Personal Protective Ensembles Recommended for Use in West Africa.

    PubMed

    Coca, Aitor; Quinn, Tyler; Kim, Jung-Hyun; Wu, Tianzhou; Powell, Jeff; Roberge, Raymond; Shaffer, Ronald

    2017-10-01

    Personal protective equipment (PPE) provides health care workers with a barrier to prevent human contact with viruses like Ebola and potential transmission of the disease. However, PPE can also introduce an additional physiological burden from potentially increased heat stress. This study evaluated the human physiological and subjective responses to continuous light exercise within environmental conditions similar to those in West Africa while wearing 3 different, commonly used PPE ensembles (E1, E2, and E3). Six healthy individuals were tested in an environmental chamber (32°C, 92% relative humidity) while walking (3 METs, 2.5 mph, 0% incline) on a treadmill for 60 minutes. All subjects wore medical scrubs and PPE items. E1 also had a face shield and fluid-resistant surgical gown; E2 additionally included goggles, coverall, and separate hood; and E3 also contained a highly impermeable coverall, separate hood, and surgical mask cover over the N95 respirator. Heart rate and core temperature at the end of the exercise were significantly higher for E2 and E3 than for E1. Subjective perceptions of heat and exertion were significantly higher for E2 and E3 than for E1. Heat stress and PPE training, as well as the implementation of a work-to-rest ratio that avoids dehydration and possible heat stress issues, are recommended. (Disaster Med Public Health Preparedness. 2017;11:580-586).

  5. A dynamic agent-based analysis for the environmental impacts of conventional and novel book retailing.

    PubMed

    Xu, Ming; Allenby, Braden; Kim, Junbeum; Kahhat, Ramzy

    2009-04-15

    The dynamics of an e-commerce market and the associated environmental impacts from a bottom-up perspective using an agent-based model is explored. A conceptual meta-theory from psychology is adopted to form the behavioral rules of artificial consumers choosing different methods of buying a book, including conventional bookstores, e-commerce, and a proposed self-pick-up option. Given the energy and emissions savings that result from a shift to e-commerce from bookstore purchase, it appears that reductions in environmental impacts are relatively probable. Additionally, our results suggest that the shift to e-commerce is mainly due to the growth of Internet users, which ties energy and emissions savings to Internet penetration. Moreover, under any scenario, the energy and emissions savings will be provided by the introduction of the proposed self-pick-up option. Our model thus provides insights into market behaviors and related environmental impacts of the growing use of e-commerce systems at the retail level, and provides a basis for the development and implementation of more sustainable policies and practices.

  6. Urban heat island research from 1991 to 2015: a bibliometric analysis

    NASA Astrophysics Data System (ADS)

    Huang, Qunfang; Lu, Yuqi

    2018-02-01

    A bibliometric analysis based on the Science Citation Index-Expanded (SCI-Expanded) database from the Web of Science was performed to review urban heat island (UHI) research from 1991 to 2015 and statistically assess its developments, trends, and directions. In total, 1822 papers published in 352 journals over the past 25 years were analyzed for scientific output; citations; subject categories; major journals; outstanding keywords; and leading countries, institutions, authors, and research collaborations. The number of UHI-related publications has continuously increased since 1991. Meteorology atmospheric sciences, environmental sciences, and construction building technology were the three most frequent subject categories. Building and Environment, International Journal of Climatology, and Theoretical and Applied Climatology were the three most popular publishing journals. The USA and China were the two leading countries in UHI research, contributing 49.56% of the total articles. Chinese Academy of Science, Arizona State University, and China Meteorological Administration published the most UHI articles. Weng QH and Santamouris M were the two most prolific authors. Author keywords were classified into four major groups: (1) research methods and indicators, e.g., remote sensing, field measurement, and models; (2) generation factors, e.g., impervious urban surfaces, urban geometry, waste heat, vegetation, and pollutants; (3) environmental effects, e.g., urban climate, heat wave, ecology, and pollution; and (4) mitigation and adaption strategies, e.g., roof technology cooling, reflective cooling, vegetation cooling, and urban geometry cooling. A comparative analysis of popular issues revealed that UHI determination (intensity, heat source, supporting techniques) remains the central topic, whereas UHI impacts and mitigation strategies are becoming the popular issues that will receive increasing scientific attention in the future. Modeling will continue to be the leading research method, and remote sensing will be used more widely. Additionally, a combination of remote sensing and field measurements with models is expected.

  7. Steroid hormones in biosolids and poultry litter: a comparison of potential environmental inputs.

    PubMed

    Bevacqua, Christine E; Rice, Clifford P; Torrents, Alba; Ramirez, Mark

    2011-05-01

    Steroid hormones can act as potent endocrine disruptors when released into the environment. The main sources of these chemicals are thought to be wastewater treatment plant discharges and waste from animal feeding operations. While these compounds have frequently been found in wastewater effluents, few studies have investigated biosolids or manure, which are routinely land applied, as potential sources. This study assessed the potential environmental contribution of steroid hormones from biosolids and chicken litter. Hormone concentrations in samples of limed biosolids collected at a waste treatment plant over a four year period ranged from <2.5 to 21.7ng/g dry weight for estrone (E1) and <2.5 to 470ng/g dry weight for progesterone. Chicken litter from 12 mid-Atlantic farms had averages of 41.4ng/g dry weight E1, 63.4ng/g dry weight progesterone, and 19.2ng/g dry weight E1-sulfate (E1-S). Other analytes studied were 17β-estradiol (E2), estriol (E3), 17α-ethinylestradiol (EE2), testosterone, E2-3-sulfate (E2-3-S), and E2-17-sulfate (E2-17-3). Copyright © 2011 Elsevier B.V. All rights reserved.

  8. A life cycle assessment of environmental performances of two combustion- and gasification-based waste-to-energy technologies.

    PubMed

    Arena, Umberto; Ardolino, Filomena; Di Gregorio, Fabrizio

    2015-07-01

    An attributional life cycle analysis (LCA) was developed to compare the environmental performances of two waste-to-energy (WtE) units, which utilize the predominant technologies among those available for combustion and gasification processes: a moving grate combustor and a vertical shaft gasifier coupled with direct melting. The two units were assumed to be fed with the same unsorted residual municipal waste, having a composition estimated as a European average. Data from several plants in operation were processed by means of mass and energy balances, and on the basis of the flows and stocks of materials and elements inside and throughout the two units, as provided by a specific substance flow analysis. The potential life cycle environmental impacts related to the operations of the two WtE units were estimated by means of the Impact 2002+ methodology. They indicate that both the technologies have sustainable environmental performances, but those of the moving grate combustion unit are better for most of the selected impact categories. The analysis of the contributions from all the stages of each specific technology suggests where improvements in technological solutions and management criteria should be focused to obtain further and remarkable environmental improvements. Copyright © 2015 Elsevier Ltd. All rights reserved.

  9. 32 CFR 203.12 - Technical assistance for public participation provider qualifications.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... in a relevant discipline (e.g., biochemistry, toxicology, environmental sciences, engineering). (3...) IN DEFENSE ENVIRONMENTAL RESTORATION ACTIVITIES § 203.12 Technical assistance for public... such criteria could include prior work in the area, knowledge of local environmental conditions or laws...

  10. 32 CFR 203.12 - Technical assistance for public participation provider qualifications.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... in a relevant discipline (e.g., biochemistry, toxicology, environmental sciences, engineering). (3...) IN DEFENSE ENVIRONMENTAL RESTORATION ACTIVITIES § 203.12 Technical assistance for public... such criteria could include prior work in the area, knowledge of local environmental conditions or laws...

  11. 32 CFR 203.12 - Technical assistance for public participation provider qualifications.

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ... in a relevant discipline (e.g., biochemistry, toxicology, environmental sciences, engineering). (3...) IN DEFENSE ENVIRONMENTAL RESTORATION ACTIVITIES § 203.12 Technical assistance for public... such criteria could include prior work in the area, knowledge of local environmental conditions or laws...

  12. 32 CFR 203.12 - Technical assistance for public participation provider qualifications.

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ... in a relevant discipline (e.g., biochemistry, toxicology, environmental sciences, engineering). (3...) IN DEFENSE ENVIRONMENTAL RESTORATION ACTIVITIES § 203.12 Technical assistance for public... such criteria could include prior work in the area, knowledge of local environmental conditions or laws...

  13. Functional analysis of environmental DNA-derived type II polyketide synthases reveals structurally diverse secondary metabolites.

    PubMed

    Feng, Zhiyang; Kallifidas, Dimitris; Brady, Sean F

    2011-08-02

    A single gram of soil is predicted to contain thousands of unique bacterial species. The majority of these species remain recalcitrant to standard culture methods, prohibiting their use as sources of unique bioactive small molecules. The cloning and analysis of DNA extracted directly from environmental samples (environmental DNA, eDNA) provides a means of exploring the biosynthetic capacity of natural bacterial populations. Environmental DNA libraries contain large reservoirs of bacterial genetic diversity from which new secondary metabolite gene clusters can be systematically recovered and studied. The identification and heterologous expression of type II polyketide synthase-containing eDNA clones is reported here. Functional analysis of three soil DNA-derived polyketide synthase systems in Streptomyces albus revealed diverse metabolites belonging to well-known, rare, and previously uncharacterized structural families. The first of these systems is predicted to encode the production of the known antibiotic landomycin E. The second was found to encode the production of a metabolite with a previously uncharacterized pentacyclic ring system. The third was found to encode the production of unique KB-3346-5 derivatives, which show activity against methicillin-resistant Staphylococcus aureus and vancomycin-resistant Enterococcus faecalis. These results, together with those of other small-molecule-directed metagenomic studies, suggest that culture-independent approaches are capable of accessing biosynthetic diversity that has not yet been extensively explored using culture-based methods. The large-scale functional screening of eDNA clones should be a productive strategy for generating structurally previously uncharacterized chemical entities for use in future drug development efforts.

  14. An Analysis of a System of Rural Regional Environmental Management Led by ‘a Group of University Students’

    NASA Astrophysics Data System (ADS)

    Nakajima, Masahiro; Nakamura, Masato; Hiroshige, Yutaka

    This paper aims to analyze the formative processes and the current state of a collaboration between ‘outsiders’ and local residents in a System of Rural Regional Environmental management from the view point of human networks. The system seeks to solve the problem of abandoned farmlands led by a group of university students (outsiders). We chronologically classified a total of eighty-nine activities addressing the issue of abandoned farmlands by utilizing three concepts: ‘calculated devices’ (e.g. the making of relations between a group of university students and local residents and strengthening these relations), ‘assistance/participation’, and ‘voluntary interaction/desire’. Based on this analysis, we: 1) developed an understanding of the formative processes as well as the current state of the collaboration between a group of university students and twenty seven local residents from an individual perspective; 2) identified ten key individuals who played a significant role in the activities examined and revealed their characteristics and motivations; 3) suggest that an existing NPO and informal relations between the local residents played a major role in the formation of collaborative networks; 4) argue that the perceived characteristics of the students (e.g. ‘youthful’, ‘inexperienced’) and the Mori-Mori club (e.g. unstable) contributed to the maintenance and expansion of the collaboration between ‘outsiders’ and local residents.

  15. 33 CFR 274.3 - References.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... Surveillance Guide, U.S. Army Environmental Hygiene Agency, January 1975. (d) Guide for the Medical Surveillance of Pest Controllers, U.S. Army Environmental Hygiene Agency, March 1976, as amended. (e) Pesticide...

  16. 33 CFR 274.3 - References.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... Surveillance Guide, U.S. Army Environmental Hygiene Agency, January 1975. (d) Guide for the Medical Surveillance of Pest Controllers, U.S. Army Environmental Hygiene Agency, March 1976, as amended. (e) Pesticide...

  17. Can dryland geoproxy data generate Quaternary palaeoclimate and palaeoenvironmental records?

    NASA Astrophysics Data System (ADS)

    Thomas, David S. G.

    2017-04-01

    Dryland regions present many challenges for robustly reconstructing late Quaternary palaeoenvironments and palaeoclimates, not least a common deficit, or considerable spatial variability, in the availability of high resolution biological proxy data sources. Substantial advances have been made in some regions in recent years, through the exploitation of new high resolution biomarker and isotope records, for example from hyrax middens (e.g. Chase et al., 2012) and from offshore sediments (e.g. Collins et al., 2014). In others however, suitable data sources for these approaches are absent, so these approaches are not available or if data are applied from distant sources, subject to risks of excessive spatial extrapolation of records in environmental contexts where environmental gradients are steep and variability is common (Thomas and Burrough, 2012, Thomas et al., 2013). In these contexts, geoproxy records, derived from the analysis of landforms and their associated sediments, are often utilised in dryland Quaternary research (e.g. Burrough and Thomas 2009, Stone and Thomas, 2013, Thomas, 2013, Lancaster et al., 2015), but with a number of associated difficulties (e.g. Chase, 2009). This paper examines these difficulties and then explores different approaches to the analysis of Quaternary landform records. It is argued that geoproxies with chronometric control, usually provided by OSL dating, have considerable potential to improve data on Quaternary environmental and climate dynamics, if records are interpreted effectively and appropriately (e.g. Bailey and Thomas, 2014, Thomas and Burrough, 2016). Examples of challenges and new approaches will be drawn from aeolian and fluvial domains, and from research in Africa, Australia and Arabia. Bailey RM, Thomas DSG 2014 Earth Surf. Proc. Landf. 39, 614-631. Burrough SL, Thomas DSG 2009. Geomorphology 103, 285-298. Chase, B 2009. Earth-Sci Rev. 93, 31-45. Chase BM et al. 2010 Quat. Sci. Rev. 56, 107-125. Collins JA et al. 2014 Earth Planet. Sci. Let. 398, 1-10. Lancaster N et al. 2016 Quat. Int. 410, 3-10. Stone AEC, Thomas DSG 2013 J. Arid Env. 93, 40-58. Thomas DSG 2013 Earth Surf. Proc. Landf. 38, 3-16. Thomas DSG, Burrough SL 2012 Quat. Int. 253, 5-17. Thomas DSG et al. 2012 J. Quat. Sci. 27, 7-12. Thomas DSG, Burrough SL 2016 Quat. Int. 410, 30-45.

  18. Bibliography of Scientific Publications 1995-2010

    DTIC Science & Technology

    2010-09-29

    VS -1) maneuver by student navy helicopter pilots [Abstract]. Aviation, Space, and Environmental Medicine, 70(4), 428. Williams, H. P., Albert, A. O... PRK ” study [Abstract]. Aviation, Space, and Environmental Medicine, 73(3), 224-225. Jovanov, E., O’Donnell, A., Priddy, B., Hormmigo, R., & Morgan, C. A...Medicine, 73(3), 276. Schallhorn, S. C., Tanzer, D., & Engle, A. (2002). Lasik in naval aviators [Abstract]. Aviation, Space, and Environmental

  19. Proposal of Environmental Impact Assessment Method for Concrete in South Korea: An Application in LCA (Life Cycle Assessment)

    PubMed Central

    Kim, Tae Hyoung; Tae, Sung Ho

    2016-01-01

    This study aims to develop a system for assessing the impact of the substances discharged from concrete production process on six environmental impact categories, i.e., global warming (GWP), acidification (AP), eutrophication (EP), abiotic depletion (ADP), ozone depletion (ODP), and photochemical oxidant creation (POCP), using the life a cycle assessment (LCA) method. To achieve this, this study proposed an LCA method specifically applicable to the Korean concrete industry by adapting the ISO standards to suit the Korean situations. The proposed LCA method involves a system that performs environmental impact assessment on the basis of input information on concrete mix design, transport distance, and energy consumption in a batch plant. The Concrete Lifecycle Assessment System (CLAS) thus developed provides user-friendly support for environmental impact assessment with specialized database for concrete mix materials and energy sources. In the case analysis using the CLAS, among the substances discharged from the production of 24 MPa concrete, those contributing to GWP, AP, EP, ADP, ODP, and POCP were assessed to amount to 309 kg-CO2 eq/m3, 28.7 kg-SO2 eq/m3, 5.21 kg-PO43− eq/m3, 0.000049 kg-CFC11 eq/m3, 34 kg/m3, and 21 kg-Ethylene eq/m3, respectively. Of these six environmental impact categories selected for the LCA in this study, ordinary Portland cement (OPC) was found to contribute most intensely to GWP and POCP, and aggregates, to AP, EP, ODP, and ADP. It was also found that the mix design with increased prop proportion of recycled aggregate was found to contribute to reducing the impact in all other categories. PMID:27827843

  20. Environmental Factors Related to Enterobiasis in a Southeast Region of Korea

    PubMed Central

    Kim, Dong-Hee; Cho, Min Kyoung; Park, Mi Kyung; Kang, Shin Ae; Kim, Bo Young; Park, Sang Kyun

    2013-01-01

    Pinworm infection can occur through contact with contaminated surfaces followed by ingestion or even through inhalation of infective eggs. We have limited information regarding environmental contamination by eggs of Enterobius vermicularis. In order to determine environmental risk factors associated with the rate of E. vermicularis infection, we investigated possible environmental risk factors using a questionnaire from 46 kindergartens in 3 different cities of the southeast area of Korea. In total, using the cellotape anal swab technique, 3,422 children were examined for E. vermicularis infection. We evaluated E. vermicularis egg of books, educational materials, toys, room door handles, dusts of window edges, desks, chairs, tables, and dusts of classrooms. The overall egg-positive rate for E. vermicularis was 6.0%, and the prevalence of enterobiasis in each kindergarten ranged between 0% and 16.9%. We found that 78.9% of egg positive kindergartens were managed by private foundations, which was significantly higher, compared with kindergartens managed by public foundations or the nation. Compared with public or national kindergartens, most private kindergartens were located in residential areas and the number of children in these areas was significantly higher. In conclusion, numbers of children in kindergartens was found to be an environmental risk factor associated with transmission of enterobiasis in Korea. PMID:23468007

  1. Environmental factors related to enterobiasis in a southeast region of Korea.

    PubMed

    Kim, Dong-Hee; Cho, Min Kyoung; Park, Mi Kyung; Kang, Shin Ae; Kim, Bo Young; Park, Sang Kyun; Yu, Hak Sun

    2013-02-01

    Pinworm infection can occur through contact with contaminated surfaces followed by ingestion or even through inhalation of infective eggs. We have limited information regarding environmental contamination by eggs of Enterobius vermicularis. In order to determine environmental risk factors associated with the rate of E. vermicularis infection, we investigated possible environmental risk factors using a questionnaire from 46 kindergartens in 3 different cities of the southeast area of Korea. In total, using the cellotape anal swab technique, 3,422 children were examined for E. vermicularis infection. We evaluated E. vermicularis egg of books, educational materials, toys, room door handles, dusts of window edges, desks, chairs, tables, and dusts of classrooms. The overall egg-positive rate for E. vermicularis was 6.0%, and the prevalence of enterobiasis in each kindergarten ranged between 0% and 16.9%. We found that 78.9% of egg positive kindergartens were managed by private foundations, which was significantly higher, compared with kindergartens managed by public foundations or the nation. Compared with public or national kindergartens, most private kindergartens were located in residential areas and the number of children in these areas was significantly higher. In conclusion, numbers of children in kindergartens was found to be an environmental risk factor associated with transmission of enterobiasis in Korea.

  2. Gene-environment interactions in cancer epidemiology: a National Cancer Institute Think Tank report.

    PubMed

    Hutter, Carolyn M; Mechanic, Leah E; Chatterjee, Nilanjan; Kraft, Peter; Gillanders, Elizabeth M

    2013-11-01

    Cancer risk is determined by a complex interplay of genetic and environmental factors. Genome-wide association studies (GWAS) have identified hundreds of common (minor allele frequency [MAF] > 0.05) and less common (0.01 < MAF < 0.05) genetic variants associated with cancer. The marginal effects of most of these variants have been small (odds ratios: 1.1-1.4). There remain unanswered questions on how best to incorporate the joint effects of genes and environment, including gene-environment (G × E) interactions, into epidemiologic studies of cancer. To help address these questions, and to better inform research priorities and allocation of resources, the National Cancer Institute sponsored a "Gene-Environment Think Tank" on January 10-11, 2012. The objective of the Think Tank was to facilitate discussions on (1) the state of the science, (2) the goals of G × E interaction studies in cancer epidemiology, and (3) opportunities for developing novel study designs and analysis tools. This report summarizes the Think Tank discussion, with a focus on contemporary approaches to the analysis of G × E interactions. Selecting the appropriate methods requires first identifying the relevant scientific question and rationale, with an important distinction made between analyses aiming to characterize the joint effects of putative or established genetic and environmental factors and analyses aiming to discover novel risk factors or novel interaction effects. Other discussion items include measurement error, statistical power, significance, and replication. Additional designs, exposure assessments, and analytical approaches need to be considered as we move from the current small number of success stories to a fuller understanding of the interplay of genetic and environmental factors. © 2013 WILEY PERIODICALS, INC.

  3. Metrics to assess ecological condition, change, and impacts in sandy beach ecosystems.

    PubMed

    Schlacher, Thomas A; Schoeman, David S; Jones, Alan R; Dugan, Jenifer E; Hubbard, David M; Defeo, Omar; Peterson, Charles H; Weston, Michael A; Maslo, Brooke; Olds, Andrew D; Scapini, Felicita; Nel, Ronel; Harris, Linda R; Lucrezi, Serena; Lastra, Mariano; Huijbers, Chantal M; Connolly, Rod M

    2014-11-01

    Complexity is increasingly the hallmark in environmental management practices of sandy shorelines. This arises primarily from meeting growing public demands (e.g., real estate, recreation) whilst reconciling economic demands with expectations of coastal users who have modern conservation ethics. Ideally, shoreline management is underpinned by empirical data, but selecting ecologically-meaningful metrics to accurately measure the condition of systems, and the ecological effects of human activities, is a complex task. Here we construct a framework for metric selection, considering six categories of issues that authorities commonly address: erosion; habitat loss; recreation; fishing; pollution (litter and chemical contaminants); and wildlife conservation. Possible metrics were scored in terms of their ability to reflect environmental change, and against criteria that are widely used for judging the performance of ecological indicators (i.e., sensitivity, practicability, costs, and public appeal). From this analysis, four types of broadly applicable metrics that also performed very well against the indicator criteria emerged: 1.) traits of bird populations and assemblages (e.g., abundance, diversity, distributions, habitat use); 2.) breeding/reproductive performance sensu lato (especially relevant for birds and turtles nesting on beaches and in dunes, but equally applicable to invertebrates and plants); 3.) population parameters and distributions of vertebrates associated primarily with dunes and the supralittoral beach zone (traditionally focused on birds and turtles, but expandable to mammals); 4.) compound measurements of the abundance/cover/biomass of biota (plants, invertebrates, vertebrates) at both the population and assemblage level. Local constraints (i.e., the absence of birds in highly degraded urban settings or lack of dunes on bluff-backed beaches) and particular issues may require alternatives. Metrics - if selected and applied correctly - provide empirical evidence of environmental condition and change, but often do not reflect deeper environmental values per se. Yet, values remain poorly articulated for many beach systems; this calls for a comprehensive identification of environmental values and the development of targeted programs to conserve these values on sandy shorelines globally. Copyright © 2014 Elsevier Ltd. All rights reserved.

  4. Using eDNA to estimate distribution of fish species in a complex river system (presentation)

    EPA Science Inventory

    Environmental DNA (eDNA) analysis of biological material shed by aquatic organisms is a noninvasive genetic tool that can improve efficiency and reduce costs associated with species detection in aquatic systems. eDNA methods are widely used to assess presence/absence of a target ...

  5. Using eDNA to estimate distribution of fish species in the St. Louis River

    EPA Science Inventory

    Environmental DNA (eDNA) analysis of extracellular material shed by aquatic organisms is a noninvasive genetic tool that can improve efficiency and reduce costs associated with species detection in aquatic systems. eDNA methods are widely used to assess presence/absence of a targ...

  6. Environmental DNA sampling protocol - filtering water to capture DNA from aquatic organisms

    USGS Publications Warehouse

    Laramie, Matthew B.; Pilliod, David S.; Goldberg, Caren S.; Strickler, Katherine M.

    2015-09-29

    Environmental DNA (eDNA) analysis is an effective method of determining the presence of aquatic organisms such as fish, amphibians, and other taxa. This publication is meant to guide researchers and managers in the collection, concentration, and preservation of eDNA samples from lentic and lotic systems. A sampling workflow diagram and three sampling protocols are included as well as a list of suggested supplies. Protocols include filter and pump assembly using: (1) a hand-driven vacuum pump, ideal for sample collection in remote sampling locations where no electricity is available and when equipment weight is a primary concern; (2) a peristaltic pump powered by a rechargeable battery-operated driver/drill, suitable for remote sampling locations when weight consideration is less of a concern; (3) a 120-volt alternating current (AC) powered peristaltic pump suitable for any location where 120-volt AC power is accessible, or for roadside sampling locations. Images and detailed descriptions are provided for each step in the sampling and preservation process.

  7. Environmental Impact Analysis Process. Final Environmental Assessment Construction and Operation of Revised PACBAR III Radar Station Saipan, CNMI

    DTIC Science & Technology

    1987-06-25

    opacus guami P MAMMALS Blue Whale Balaenoptera musculus E Sperm Whale Physeter catodon E Sambar Deer...much feared Commander Quiroga landed at Agingan in an attempt to punish rebellious natives. Quiroga’s men roamed up and down the western and...and men into the desperate battles with U.S. forces in the South Pacific (Crowl: 1960:55). Slowly, as American industrial might was brought to bear

  8. Internet-Based Delphi Research: Case Based Discussion

    PubMed Central

    Donohoe, Holly M.; Stellefson, Michael L.

    2013-01-01

    The interactive capacity of the Internet offers benefits that are intimately linked with contemporary research innovation in the natural resource and environmental studies domains. However, e-research methodologies, such as the e-Delphi technique, have yet to undergo critical review. This study advances methodological discourse on the e-Delphi technique by critically assessing an e-Delphi case study. The analysis suggests that the benefits of using e-Delphi are noteworthy but the authors acknowledge that researchers are likely to face challenges that could potentially compromise research validity and reliability. To ensure that these issues are sufficiently considered when planning and designing an e-Delphi, important facets of the technique are discussed and recommendations are offered to help the environmental researcher avoid potential pitfalls associated with coordinating e-Delphi research. PMID:23288149

  9. Water contamination and environmental ecosystem in the Harlem River

    NASA Astrophysics Data System (ADS)

    Wang, J.

    2013-12-01

    Nutrients, bacteria, polychlorinated biphenyls (PCBs) and other contaminates have degraded water quality of the Harlem River. The Harlem River is a natural straight connected to the Hudson River and the East River, and it has been used for navigation and boating. Water samples have been collected and analyzed from 2011 to 2013. Phosphorus, ammonia, turbidity, fecal coliform, E.Coli., and enterococcus all exceed regulated levels for New York City waters. There is only one wastewater treatment plant (Wards Island WWTP) that serves this river. Combined sewer overflows (CSOs) discharge raw sewage into the river during storms in spring and summer. Commercial fishing is banned, .however, individuals still fish. While some fishermen catch and release, it is likely some fish are consumed, creating concern for the environmental health of the community along the river. Storm water runoff, CSOs, and wastewater effluents are major pollutant sources of PCB 11 (3,3' dichlorobiphenyl), nutrient and bacteria. Nutrients, bacteria levels and their spatial/temporal variations were analyzed, and PCB analysis is underway. This data is a critical first step towards improving the water quality and environmental ecosystem in the Harlem River.

  10. The school environment and adolescent physical activity and sedentary behaviour: a mixed‐studies systematic review

    PubMed Central

    Atkin, A. J.; Corder, K.; Suhrcke, M.; van Sluijs, E. M. F.

    2015-01-01

    Summary There is increasing academic and policy interest in interventions aiming to promote young people's health by ensuring that the school environment supports healthy behaviours. The purpose of this review was to summarize the current evidence on school‐based policy, physical and social‐environmental influences on adolescent physical activity and sedentary behaviour. Electronic databases were searched to identify studies that (1) involved healthy adolescents (11–18 years old), (2) investigated school‐environmental influences and (3) reported a physical activity and/or sedentary behaviour outcome or theme. Findings were synthesized using a non‐quantitative synthesis and thematic analysis. Ninety‐three papers of mixed methodological quality were included. A range of school‐based policy (e.g. break time length), physical (e.g. facilities) and social‐environmental (e.g. teacher behaviours) factors were associated with adolescent physical activity, with limited research on sedentary behaviour. The mixed‐studies synthesis revealed the importance of specific activity settings (type and location) and intramural sport opportunities for all students. Important physical education‐related factors were a mastery‐oriented motivational climate and autonomy supportive teaching behaviours. Qualitative evidence highlighted the influence of the wider school climate and shed light on complexities of the associations observed in the quantitative literature. This review identifies future research needs and discusses potential intervention approaches to be considered. PMID:26680609

  11. The school environment and adolescent physical activity and sedentary behaviour: a mixed-studies systematic review.

    PubMed

    Morton, K L; Atkin, A J; Corder, K; Suhrcke, M; van Sluijs, E M F

    2016-02-01

    There is increasing academic and policy interest in interventions aiming to promote young people's health by ensuring that the school environment supports healthy behaviours. The purpose of this review was to summarize the current evidence on school-based policy, physical and social-environmental influences on adolescent physical activity and sedentary behaviour. Electronic databases were searched to identify studies that (1) involved healthy adolescents (11-18 years old), (2) investigated school-environmental influences and (3) reported a physical activity and/or sedentary behaviour outcome or theme. Findings were synthesized using a non-quantitative synthesis and thematic analysis. Ninety-three papers of mixed methodological quality were included. A range of school-based policy (e.g. break time length), physical (e.g. facilities) and social-environmental (e.g. teacher behaviours) factors were associated with adolescent physical activity, with limited research on sedentary behaviour. The mixed-studies synthesis revealed the importance of specific activity settings (type and location) and intramural sport opportunities for all students. Important physical education-related factors were a mastery-oriented motivational climate and autonomy supportive teaching behaviours. Qualitative evidence highlighted the influence of the wider school climate and shed light on complexities of the associations observed in the quantitative literature. This review identifies future research needs and discusses potential intervention approaches to be considered. © 2015 World Obesity.

  12. Environmental impact analysis with the airspace concept evaluation system

    NASA Technical Reports Server (NTRS)

    Augustine, Stephen; Capozzi, Brian; DiFelici, John; Graham, Michael; Thompson, Terry; Miraflor, Raymond M. C.

    2005-01-01

    The National Aeronautics and Space Administration (NASA) Ames Research Center has developed the Airspace Concept Evaluation System (ACES), which is a fast-time simulation tool for evaluating Air Traffic Management (ATM) systems. This paper describes linking a capability to ACES which can analyze the environmental impact of proposed future ATM systems. This provides the ability to quickly evaluate metrics associated with environmental impacts of aviation for inclusion in multi-dimensional cost-benefit analysis of concepts for evolution of the National Airspace System (NAS) over the next several decades. The methodology used here may be summarized as follows: 1) Standard Federal Aviation Administration (FAA) noise and emissions-inventory models, the Noise Impact Routing System (NIRS) and the Emissions and Dispersion Modeling System (EDMS), respectively, are linked to ACES simulation outputs; 2) appropriate modifications are made to ACES outputs to incorporate all information needed by the environmental models (e.g., specific airframe and engine data); 3) noise and emissions calculations are performed for all traffic and airports in the study area for each of several scenarios, as simulated by ACES; and 4) impacts of future scenarios are compared to the current NAS baseline scenario. This paper also provides the results of initial end-to-end, proof-of-concept runs of the integrated ACES and environmental-modeling capability. These preliminary results demonstrate that if no growth is likely to be impeded by significant environmental impacts that could negatively affect communities throughout the nation.

  13. Executive Order 12898 and Social, Economic, and Sociopolitical Factors Influencing Toxic Release Inventory Facility Location in EPA Region 6: A Multi-Scale Spatial Assessment of Environmental Justice

    ERIC Educational Resources Information Center

    Moore, Andrea Lisa

    2013-01-01

    Toxic Release Inventory facilities are among the many environmental hazards shown to create environmental inequities in the United States. This project examined four factors associated with Toxic Release Inventory, specifically, manufacturing facility location at multiple spatial scales using spatial analysis techniques (i.e., O-ring statistic and…

  14. Optimizing Environmental Flow Operation Rules based on Explicit IHA Constraints

    NASA Astrophysics Data System (ADS)

    Dongnan, L.; Wan, W.; Zhao, J.

    2017-12-01

    Multi-objective operation of reservoirs are increasingly asked to consider the environmental flow to support ecosystem health. Indicators of Hydrologic Alteration (IHA) is widely used to describe environmental flow regimes, but few studies have explicitly formulated it into optimization models and thus is difficult to direct reservoir release. In an attempt to incorporate the benefit of environmental flow into economic achievement, a two-objective reservoir optimization model is developed and all 33 hydrologic parameters of IHA are explicitly formulated into constraints. The benefit of economic is defined by Hydropower Production (HP) while the benefit of environmental flow is transformed into Eco-Index (EI) that combined 5 of the 33 IHA parameters chosen by principal component analysis method. Five scenarios (A to E) with different constraints are tested and solved by nonlinear programming. The case study of Jing Hong reservoir, located in the upstream of Mekong basin, China, shows: 1. A Pareto frontier is formed by maximizing on only HP objective in scenario A and on only EI objective in scenario B. 2. Scenario D using IHA parameters as constraints obtains the optimal benefits of both economic and ecological. 3. A sensitive weight coefficient is found in scenario E, but the trade-offs between HP and EI objectives are not within the Pareto frontier. 4. When the fraction of reservoir utilizable capacity reaches 0.8, both HP and EI capture acceptable values. At last, to make this modelmore conveniently applied to everyday practice, a simplified operation rule curve is extracted.

  15. SAMCO: Society Adaptation for coping with Mountain risks in a global change COntext

    NASA Astrophysics Data System (ADS)

    Grandjean, Gilles; Bernardie, Severine; Malet, Jean-Philippe; Puissant, Anne; Houet, Thomas; Berger, Frederic; Fort, Monique; Pierre, Daniel

    2013-04-01

    The SAMCO project aims to develop a proactive resilience framework enhancing the overall resilience of societies on the impacts of mountain risks. The project aims to elaborate methodological tools to characterize and measure ecosystem and societal resilience from an operative perspective on three mountain representative case studies. To achieve this objective, the methodology is split in several points with (1) the definition of the potential impacts of global environmental changes (climate system, ecosystem e.g. land use, socio-economic system) on landslide hazards, (2) the analysis of these consequences in terms of vulnerability (e.g. changes in the location and characteristics of the impacted areas and level of their perturbation) and (3) the implementation of a methodology for quantitatively investigating and mapping indicators of mountain slope vulnerability exposed to several hazard types, and the development of a GIS-based demonstration platform. The strength and originality of the SAMCO project will be to combine different techniques, methodologies and models (multi-hazard assessment, risk evolution in time, vulnerability functional analysis, and governance strategies) and to gather various interdisciplinary expertises in earth sciences, environmental sciences, and social sciences. The multidisciplinary background of the members could potentially lead to the development of new concepts and emerging strategies for mountain hazard/risk adaptation. Research areas, characterized by a variety of environmental, economical and social settings, are severely affected by landslides, and have experienced significant land use modifications (reforestation, abandonment of traditional agricultural practices) and human interferences (urban expansion, ski resorts construction) over the last century.

  16. Atom Probe Tomographic Analysis of Biological Systems Enabled by Advanced Specimen Preparation Approaches

    NASA Astrophysics Data System (ADS)

    Perea, D. E.; Evans, J. E.

    2017-12-01

    The ability to image biointerfaces over nanometer to micrometer length scales is fundamental to correlating biological composition and structure to physiological function, and is aided by a multimodal approach using advanced complementary microscopic and spectroscopic characterization techniques. Atom Probe Tomography (APT) is a rapidly expanding technique for atomic-scale three-dimensional structural and chemical analysis. However, the regular application of APT to soft biological materials is lacking in large part due to difficulties in specimen preparation and inabilities to yield meaningful tomographic reconstructions that produce atomic scale compositional distributions as no other technique currently can. Here we describe the atomic-scale tomographic analysis of biological materials using APT that is facilitated by an advanced focused ion beam based approach. A novel specimen preparation strategy is used in the analysis of horse spleen ferritin protein embedded in an organic polymer resin which provides chemical contrast to distinguish the inorganic-organic interface of the ferrihydrite mineral core and protein shell of the ferritin protein. One-dimensional composition profiles directly reveal an enhanced concentration of P and Na at the surface of the ferrihydrite mineral core. We will also describe the development of a unique multifunctional environmental transfer hub allowing controlled cryogenic transfer of specimens under vacuum pressure conditions between an Atom Probe and cryo-FIB/SEM. The utility of the environmental transfer hub is demonstrated through the acquisition of previously unavailable mass spectral analysis of an intact organometallic molecule made possible via controlled cryogenic transfer. The results demonstrate a viable application of APT analysis to study complex biological organic/inorganic interfaces relevant to energy and the environment. References D.E. Perea et al. An environmental transfer hub for multimodal atom probe tomography, Adv. Struct. Chem. Imag, 2017, 3:12 The research was performed at the Environmental Molecular Sciences Laboratory; a national scientific user facility sponsored by the Department of Energy's Office of Biological and Environmental Research located at Pacific Northwest National Laboratory.

  17. Final Environmental Impact Statement (EIS) for the Space Nuclear Thermal Propulsion (SNTP) Program. Sanitized Version. Appendices

    DTIC Science & Technology

    1991-09-19

    and lcom y (U) 3.2-32 3.2.2.1.2 Land Useand IW au (U) 3.2-32 3.2.2.1.3 Noise (U) 3.2-36 3.2.2.1.4 Historic and ArchaolosicAl lcaurves (U) 3.2-36 I, p...and inhalation shielding factor. The total organ dose is then determined ! y summing te component doprs received from each pathway and each...2.078E+01 Sr-90 5.307E+00 Ge-75 3.256E+02 Sr-91 2.247E+05 Ge-77 1.240E+02 Sr-92 9.517E+05 Ge-78 5.980E+03 Sr-93 1.559E+07 As-76 2.793E-03 Y -90 1.980E

  18. Nuclear Thermal Propulsion (NTP) Development Activities at the NASA Marshall Space Flight Center - 2006 Accomplishments

    NASA Technical Reports Server (NTRS)

    Ballard, Richard O.

    2007-01-01

    In 2005-06, the Prometheus program funded a number of tasks at the NASA-Marshall Space Flight Center (MSFC) to support development of a Nuclear Thermal Propulsion (NTP) system for future manned exploration missions. These tasks include the following: 1. NTP Design Develop Test & Evaluate (DDT&E) Planning 2. NTP Mission & Systems Analysis / Stage Concepts & Engine Requirements 3. NTP Engine System Trade Space Analysis and Studies 4. NTP Engine Ground Test Facility Assessment 5. Non-Nuclear Environmental Simulator (NTREES) 6. Non-Nuclear Materials Fabrication & Evaluation 7. Multi-Physics TCA Modeling. This presentation is a overview of these tasks and their accomplishments

  19. Longitudinal Effects on Early Adolescent Language: A Twin Study

    PubMed Central

    DeThorne, Laura Segebart; Smith, Jamie Mahurin; Betancourt, Mariana Aparicio; Petrill, Stephen A.

    2016-01-01

    Purpose We evaluated genetic and environmental contributions to individual differences in language skills during early adolescence, measured by both language sampling and standardized tests, and examined the extent to which these genetic and environmental effects are stable across time. Method We used structural equation modeling on latent factors to estimate additive genetic, shared environmental, and nonshared environmental effects on variance in standardized language skills (i.e., Formal Language) and productive language-sample measures (i.e., Productive Language) in a sample of 527 twins across 3 time points (mean ages 10–12 years). Results Individual differences in the Formal Language factor were influenced primarily by genetic factors at each age, whereas individual differences in the Productive Language factor were primarily due to nonshared environmental influences. For the Formal Language factor, the stability of genetic effects was high across all 3 time points. For the Productive Language factor, nonshared environmental effects showed low but statistically significant stability across adjacent time points. Conclusions The etiology of language outcomes may differ substantially depending on assessment context. In addition, the potential mechanisms for nonshared environmental influences on language development warrant further investigation. PMID:27732720

  20. A Systematic Review of Methodology: Time Series Regression Analysis for Environmental Factors and Infectious Diseases

    PubMed Central

    Imai, Chisato; Hashizume, Masahiro

    2015-01-01

    Background: Time series analysis is suitable for investigations of relatively direct and short-term effects of exposures on outcomes. In environmental epidemiology studies, this method has been one of the standard approaches to assess impacts of environmental factors on acute non-infectious diseases (e.g. cardiovascular deaths), with conventionally generalized linear or additive models (GLM and GAM). However, the same analysis practices are often observed with infectious diseases despite of the substantial differences from non-infectious diseases that may result in analytical challenges. Methods: Following the Preferred Reporting Items for Systematic Reviews and Meta-Analyses guidelines, systematic review was conducted to elucidate important issues in assessing the associations between environmental factors and infectious diseases using time series analysis with GLM and GAM. Published studies on the associations between weather factors and malaria, cholera, dengue, and influenza were targeted. Findings: Our review raised issues regarding the estimation of susceptible population and exposure lag times, the adequacy of seasonal adjustments, the presence of strong autocorrelations, and the lack of a smaller observation time unit of outcomes (i.e. daily data). These concerns may be attributable to features specific to infectious diseases, such as transmission among individuals and complicated causal mechanisms. Conclusion: The consequence of not taking adequate measures to address these issues is distortion of the appropriate risk quantifications of exposures factors. Future studies should pay careful attention to details and examine alternative models or methods that improve studies using time series regression analysis for environmental determinants of infectious diseases. PMID:25859149

  1. Small business support of youth physical activity opportunities.

    PubMed

    Suminski, Richard R; Ding, Ding

    2012-01-01

    Describe small business support for youth physical activity opportunities (YPAO) and identify factors associated with this support. Cross-sectional analysis of quantitative data relating business characteristics and support for YPAO. Eight demographically heterogeneous, urban neighborhoods in a Midwest metropolitan area. Adult small business owners (n = 90; 65% response rate; mean age 48.4 years; 73.3% male; 45.2% minority). Neighborhood demographics from the 2000 U.S. Census and self-reported business and owner characteristics. Multivariate analysis of variance was used to contrast business and owner characteristics between businesses that did and did not support YPAO. Businesses supporting YPAO had larger annual operating (F = 7.6; p = .018) and advertising budgets (F = 8.5; p = .009) and had younger owners (F = 6.1; p = .034), with sports backgrounds (χ(2) = 5.6; p = .018) and who felt businesses should support YPAO (χ(2) = 3.8; p = .048). Of the 46 businesses not supporting YPAO, 82.6% felt small businesses should support YPAO. The major reasons for nonsupport were difficulty identifying YPAO to support and not being asked for support. Business (e.g., budgets) and business owner characteristics (e.g., age), owner connectedness with YPAO, and the approach used for garnering support (active solicitation, clearly defined support mechanism) were associated with supporting YPAO. Additional business (e.g., annual revenues), owner (e.g., perceptions of YPAO), and environmental (e.g., crime rate, land use) factors should be examined as potential correlates.

  2. Final Environmental Assessment: Demolition/Restoration of Ipswich Antenna Test Facility

    DTIC Science & Technology

    2012-05-01

    sourc--es \\ Veta quantified b y using fual oU e onsu.mption from the-last full yesr of use ( CY20 1 0). Buildings S-3, S-5, and S-15 ware haated b y #2...the environment. E nvironmental Consequences Environmental analyses focused on the following areas: land use, socioeconomics, utilities...the wetland as possib I e . In addition the Conservation Commission may impose additional requirements such as: staking the wetland boundaries

  3. Programmatic Environmental Assessment (EA) for Hazardous Materials Removal at F. E. Warren Air Force Base, Wyoming

    DTIC Science & Technology

    2013-05-31

    ACM). The FEW Environmental Planning Function ( EPF ) conducted the analysis of this proposed action. 2. PURPOSE AND NEED FOR ACTION. The... EPF determined that the proposed action has the potential to affect Air Quality, Occupational Safety and Health, Cultural Resources and Hazardous Waste

  4. 78 FR 47272 - Monsanto Co.; Availability of Plant Pest Risk Assessment and Environmental Assessment for...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2013-08-05

    ... prepared a draft EA in which we present two alternatives based on our analysis of data submitted by... your comment to Docket No. APHIS-2012-0020, Regulatory Analysis and Development, PPD, APHIS, Station 3A... CONTACT: Dr. Rebecca Stankiewicz Gabel, Chief, Biotechnology Environmental Analysis Branch, Environmental...

  5. An estimated carbon footprint of NHS primary dental care within England. How can dentistry be more environmentally sustainable?

    PubMed

    Duane, B; Lee, M Berners; White, S; Stancliffe, R; Steinbach, I

    2017-10-27

    Introduction National Health Service (NHS) England dental teams need to consider from a professional perspective how they can, along with their NHS colleagues, play their part in reducing their carbon emissions and improve the sustainability of the care they deliver. In order to help understand carbon emissions from dental services, Public Health England (PHE) commissioned a calculation and analysis of the carbon footprint of key dental procedures.Methods Secondary data analysis from Business Services Authority (BSA), Health and Social Care Information Centre (HSCIC) (now called NHS Digital, Information Services Division [ISD]), National Association of Specialist Dental Accountants (NASDA) and recent Scottish papers was undertaken using a process-based and environmental input-output analysis using industry established conversion factors.Results The carbon footprint of the NHS dental service is 675 kilotonnes carbon dioxide equivalents (CO2e). Examinations contributed the highest proportion to this footprint (27.1%) followed by scale and polish (13.4%) and amalgam/composite restorations (19.3%). From an emissions perspective, nearly 2/3 (64.5%) of emissions related to travel (staff and patient travel), 19% procurement (the products and services dental clinics buy) and 15.3% related to energy use.Discussion The results are estimates of carbon emissions based on a number of broad assumptions. More research, education and awareness is needed to help dentistry develop low carbon patient pathways.

  6. Models of reforestation productivity and carbon sequestration for land use and climate change adaptation planning in South Australia.

    PubMed

    Hobbs, Trevor J; Neumann, Craig R; Meyer, Wayne S; Moon, Travis; Bryan, Brett A

    2016-10-01

    Environmental management and regional land use planning has become more complex in recent years as growing world population, climate change, carbon markets and government policies for sustainability have emerged. Reforestation and agroforestry options for environmental benefits, carbon sequestration, economic development and biodiversity conservation are now important considerations of land use planners. New information has been collected and regionally-calibrated models have been developed to facilitate better regional land use planning decisions and counter the limitations of currently available models of reforestation productivity and carbon sequestration. Surveys of above-ground biomass of 264 reforestation sites (132 woodlots, 132 environmental plantings) within the agricultural regions of South Australia were conducted, and combined with spatial information on climate and soils, to develop new spatial and temporal models of plant density and above-ground biomass productivity from reforestation. The models can be used to estimate productivity and total carbon sequestration (i.e. above-ground + below-ground biomass) under a continuous range of planting designs (e.g. variable proportions of trees and shrubs or plant densities), timeframes and future climate scenarios. Representative spatial models (1 ha resolution) for 3 reforestation designs (i.e. woodlots, typical environmental planting, biodiverse environmental plantings) × 3 timeframes (i.e. 25, 45, 65 years) × 4 possible climates (i.e. no change, mild, moderate, severe warming and drying) were generated (i.e. 36 scenarios) for use within land use planning tools. Copyright © 2016 Elsevier Ltd. All rights reserved.

  7. Is environmental sustainability a strategic priority for logistics service providers?

    PubMed

    Evangelista, Pietro; Colicchia, Claudia; Creazza, Alessandro

    2017-08-01

    Despite an increasing number of third-party logistics service providers (3PLs) regard environmental sustainability as a key area of management, there is still great uncertainty on how 3PLs implement environmental strategies and on how they translate green efforts into practice. Through a multiple case study analysis, this paper explores the environmental strategies of a sample of medium-sized 3PLs operating in Italy and the UK, in terms of environmental organizational culture, initiatives, and influencing factors. Our analysis shows that, notwithstanding environmental sustainability is generally recognised as a strategic priority, a certain degree of diversity in the deployment of environmental strategies still exists. This paper is original since the extant literature on green strategies of 3PLs provides findings predominantly from a single country perspective and mainly investigates large/multinational organizations. It also provides indications to help managers of medium-sized 3PLs in positioning their business. This is particularly meaningful in the 3PL industry, where medium-sized organizations significantly contribute to the generated turnover and market value. Copyright © 2017 Elsevier Ltd. All rights reserved.

  8. Shifts in microbial communities in soil, rhizosphere and roots of two major crop systems under elevated CO2 and O3

    USDA-ARS?s Scientific Manuscript database

    Rising atmospheric concentrations of CO2 and O3 are key features of global environmental change. To investigate changes in the belowground bacterial community composition in response to elevated CO2 and O3 (eCO2 and eO3) the endosphere, rhizosphere and soil were sampled from soybeans under eCO2 and ...

  9. Characterization of Aeromonas hydrophila wound pathotypes by comparative genomic and functional analyses of virulence genes.

    PubMed

    Grim, Christopher J; Kozlova, Elena V; Sha, Jian; Fitts, Eric C; van Lier, Christina J; Kirtley, Michelle L; Joseph, Sandeep J; Read, Timothy D; Burd, Eileen M; Tall, Ben D; Joseph, Sam W; Horneman, Amy J; Chopra, Ashok K; Shak, Joshua R

    2013-04-23

    Aeromonas hydrophila has increasingly been implicated as a virulent and antibiotic-resistant etiologic agent in various human diseases. In a previously published case report, we described a subject with a polymicrobial wound infection that included a persistent and aggressive strain of A. hydrophila (E1), as well as a more antibiotic-resistant strain of A. hydrophila (E2). To better understand the differences between pathogenic and environmental strains of A. hydrophila, we conducted comparative genomic and functional analyses of virulence-associated genes of these two wound isolates (E1 and E2), the environmental type strain A. hydrophila ATCC 7966(T), and four other isolates belonging to A. aquariorum, A. veronii, A. salmonicida, and A. caviae. Full-genome sequencing of strains E1 and E2 revealed extensive differences between the two and strain ATCC 7966(T). The more persistent wound infection strain, E1, harbored coding sequences for a cytotoxic enterotoxin (Act), a type 3 secretion system (T3SS), flagella, hemolysins, and a homolog of exotoxin A found in Pseudomonas aeruginosa. Corresponding phenotypic analyses with A. hydrophila ATCC 7966(T) and SSU as reference strains demonstrated the functionality of these virulence genes, with strain E1 displaying enhanced swimming and swarming motility, lateral flagella on electron microscopy, the presence of T3SS effector AexU, and enhanced lethality in a mouse model of Aeromonas infection. By combining sequence-based analysis and functional assays, we characterized an A. hydrophila pathotype, exemplified by strain E1, that exhibited increased virulence in a mouse model of infection, likely because of encapsulation, enhanced motility, toxin secretion, and cellular toxicity. Aeromonas hydrophila is a common aquatic bacterium that has increasingly been implicated in serious human infections. While many determinants of virulence have been identified in Aeromonas, rapid identification of pathogenic versus nonpathogenic strains remains a challenge for this genus, as it is for other opportunistic pathogens. This paper demonstrates, by using whole-genome sequencing of clinical Aeromonas strains, followed by corresponding virulence assays, that comparative genomics can be used to identify a virulent subtype of A. hydrophila that is aggressive during human infection and more lethal in a mouse model of infection. This aggressive pathotype contained genes for toxin production, toxin secretion, and bacterial motility that likely enabled its pathogenicity. Our results highlight the potential of whole-genome sequencing to transform microbial diagnostics; with further advances in rapid sequencing and annotation, genomic analysis will be able to provide timely information on the identities and virulence potential of clinically isolated microorganisms.

  10. Quantitative and Qualitative Analysis of Bacteria in Er(III) Solution by Thin-Film Magnetopheresis

    PubMed Central

    Zborowski, Maciej; Tada, Yoko; Malchesky, Paul S.; Hall, Geraldine S.

    1993-01-01

    Magnetic deposition, quantitation, and identification of bacteria reacting with the paramagnetic trivalent lanthanide ion, Er3+, was evaluated. The magnetic deposition method was dubbed thin-film magnetopheresis. The optimization of the magnetic deposition protocol was accomplished with Escherichia coli as a model organism in 150 mM NaCl and 5 mM ErCl3 solution. Three gram-positive bacteria, Staphylococcus epidermidis, Staphylococcus saprophyticus, and Enterococcus faecalis, and four gram-negative bacteria, E. coli, Pseudomonas aeruginosa, Proteus mirabilis, and Klebsiella pneumoniae, were subsequently investigated. Quantitative analysis consisted of the microscopic cell count and a scattered-light scanning of the magnetically deposited material aided by the computer data acquisition system. Qualitative analysis consisted of Gram stain differentiation and fluorescein isothiocyanate staining in combination with selected antisera against specific types of bacteria on the solid substrate. The magnetic deposition protocol allowed quantitative detection of E. coli down to the concentration of 105 CFU ml-1, significant in clinical diagnosis applications such as urinary tract infections. Er3+ did not interfere with the typical appearance of the Gram-stained bacteria nor with the antigen recognition by the antibody in the immunohistological evaluations. Indirect antiserum-fluorescein isothiocyanate labelling correctly revealed the presence of E. faecalis and P. aeruginosa in the magnetically deposited material obtained from the mixture of these two bacterial species. On average, the reaction of gram-positive organisms was significantly stronger to the magnetic field in the presence of Er3+ than the reaction of gram-negative organisms. The thin-film magnetophoresis offers promise as a rapid method for quantitative and qualitative analysis of bacteria in solutions such as urine or environmental water. Images PMID:16348916

  11. Learning in and about rural places: Connections and tensions between students' everyday experiences and environmental quality issues in their community

    NASA Astrophysics Data System (ADS)

    Zimmerman, Heather Toomey; Weible, Jennifer L.

    2017-03-01

    Guided by sociocultural perspectives on the importance of place as a resource for learning, we investigated 14- and 15-year old students' understandings of their community and water quality during a school-based watershed unit. Methods included a theory-driven thematic analysis of field notes and video transcripts from four biology classrooms, a qualitative and quantitative analysis of 67 pairs of matched pre- and post-intervention mindmaps, and a content analysis of 73 student reflections. As they learned about water quality, learners recognized the relevance of the watershed's health to the health of their community. Students acknowledged the impacts of local economically driven activities (e.g., natural gas wells, application of agrichemicals) and leisure activities (e.g., boating, fishing) on the watershed's environmental health. As students learned in and about their watershed, they experienced both connections and tensions between their everyday experiences and the environmental problems in their community. The students suggested individual sustainability actions needed to address water quality issues; however, the students struggled to understand how to act collectively. Implications of rural experiences as assets to future environmental sciences learning are discussed as well as the implications of educational experiences that do not include an advocacy component when students uncover environmental health issues. We suggest further consideration is needed on how to help young people develop action-oriented science knowledge, not just inert knowledge of environmental problems, during place-based education units.

  12. Integrated approach reveals diet, APOE genotype and sex affect immune response in APP mice.

    PubMed

    Nam, Kyong Nyon; Wolfe, Cody M; Fitz, Nicholas F; Letronne, Florent; Castranio, Emilie L; Mounier, Anais; Schug, Jonathan; Lefterov, Iliya; Koldamova, Radosveta

    2018-01-01

    Alzheimer's disease (AD) is a multifactorial neurodegenerative disorder that is influenced by genetic and environmental risk factors, such as inheritance of ε4 allele of APOE (APOE4), sex and diet. Here, we examined the effect of high fat diet (HFD) on amyloid pathology and expression profile in brains of AD model mice expressing human APOE isoforms (APP/E3 and APP/E4 mice). APP/E3 and APP/E4 mice were fed HFD or Normal diet for 3months. We found that HFD significantly increased amyloid plaques in male and female APP/E4, but not in APP/E3 mice. To identify differentially expressed genes and gene-networks correlated to diet, APOE isoform and sex, we performed RNA sequencing and applied Weighted Gene Co-expression Network Analysis. We determined that the immune response network with major hubs Tyrobp/DAP12, Csf1r, Tlr2, C1qc and Laptm5 correlated significantly and positively to the phenotype of female APP/E4-HFD mice. Correspondingly, we found that in female APP/E4-HFD mice, microglia coverage around plaques, particularly of larger size, was significantly reduced. This suggests altered containment of the plaque growth and sex-dependent vulnerability in response to diet. The results of our study show concurrent impact of diet, APOE isoform and sex on the brain transcriptome and AD-like phenotype. Copyright © 2017 Elsevier B.V. All rights reserved.

  13. A bio-economic analysis of a sustainable agricultural transition using green biorefinery.

    PubMed

    Cong, Rong-Gang; Termansen, Mette

    2016-11-15

    Traditional pig production often relies on cereal-based feed, which has adverse environmental effects, e.g. nitrogen leaching and greenhouse gas (GHG) emissions. Alternative production systems are therefore sought to improve the sustainability of pig production. A promising alternative is to use proteinaceous feed from grass, produced in a green bio-refinery (GBR), to substitute part of the cereals in the feed. Cultivation of grass on arable land can reduce nitrogen leaching and pesticide application, and increase carbon storage. The GBR using grass as feedstock also produces valuable byproducts, e.g. fibre and biogas. In this study we combine a life-cycle analysis (LCA) and a cost-benefit analysis to compare the economic and environmental effects of producing the pig feed to produce 1ton of pork using two feeding systems. We apply this approach to the intensive Danish pork production as a case study. The results show that compared with traditional cereal-based feeding system for producing a ton of pork, using proteinaceous concentrate from small-scale GBR will (1) decrease the average feed cost by 5.01%; (2) produce a profit of 96€ before tax in the GBR; and (3) decrease the nitrogen leaching (NO3-N) by 28.2%. However, in most of the scenarios (except for G2), the nitrogen emissions into the air (N2O-N) will also increase because of the increased N fertilizer application compared to a cereal-based system. In most of the scenarios (except for S1 and G1), the energy and land use will also be saved. However, some important factors, e.g. the soil characteristics, pressed juice fraction in fresh biomass and scale of GBR, could subvert the conclusion about energy and land use saving in the alternative feeding system. Copyright © 2016 Elsevier B.V. All rights reserved.

  14. Determination of high-molecular weight polycyclic aromatic hydrocarbons in high performance liquid chromatography fractions of coal tar standard reference material 1597a via solid-phase nanoextraction and laser-excited time-resolved Shpol'skii spectroscopy

    PubMed Central

    Wilson, Walter B.; Alfarhani, Bassam; Moore, Anthony F. T.; Bisson, Cristina; Wise, Stephen A.; Campiglia, Andres D.

    2016-01-01

    This article presents an alternative approach for the analysis of high molecular weight – polycyclic aromatic hydrocarbons (HMW-PAHs) with molecular mass 302 Da in complex environmental samples. This is not a trivial task due to the large number of molecular mass 302 Da isomers with very similar chromatographic elution times and similar, possibly even virtually identical, mass fragmentation patterns. The method presented here is based on 4.2 K laser-excited time-resolved Shpol'skii spectroscopy, a high resolution spectroscopic technique with the appropriate selectivity for the unambiguous determination of PAHs with the same molecular mass. The potential of this approach is demonstrated here with the analysis of a coal tar standard reference material (SRM) 1597a. Liquid chromatography fractions were submitted to the spectroscopic analysis of five targeted isomers, namely dibenzo[a,l]pyrene, dibenzo[a,e]pyrene, dibenzo[a,i]pyrene, naphtho[2,3-a]pyrene and dibenzo[a,h]pyrene. Prior to analyte determination, the liquid chromatographic fractions were pre-concentrated with gold nanoparticles. Complete analysis was possible with microliters of chromatographic fractions and organic solvents. The limits of detection varied from 0.05 (dibenzo[a,l]pyrene) to 0.24 μg L−1 (dibenzo[a,e]pyrene). The excellent analytical figures of merit associated to its non-destructive nature, which provides ample opportunity for further analysis with other instrumental methods, makes this approach an attractive alternative for the determination of PAH isomers in complex environmental samples. PMID:26653471

  15. 36 CFR 254.3 - Requirements.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... and resource management plan applicable to such area. (g) Environmental analysis. After an agreement to initiate an exchange is signed, the authorized officer shall undertake an environmental analysis in accordance with the National Environmental Policy Act of 1969 (42 U.S.C. 4371), the Council on...

  16. Assessing the effects of regional payment for watershed services program on water quality using an intervention analysis model.

    PubMed

    Lu, Yan; He, Tian

    2014-09-15

    Much attention has been recently paid to ex-post assessments of socioeconomic and environmental benefits of payment for ecosystem services (PES) programs on poverty reduction, water quality, and forest protection. To evaluate the effects of a regional PES program on water quality, we selected chemical oxygen demand (COD) and ammonia-nitrogen (NH3-N) as indicators of water quality. Statistical methods and an intervention analysis model were employed to assess whether the PES program produced substantial changes in water quality at 10 water-quality sampling stations in the Shaying River watershed, China during 2006-2011. Statistical results from paired-sample t-tests and box plots of COD and NH3-N concentrations at the 10 stations showed that the PES program has played a positive role in improving water quality and reducing trans-boundary water pollution in the Shaying River watershed. Using the intervention analysis model, we quantitatively evaluated the effects of the intervention policy, i.e., the watershed PES program, on water quality at the 10 stations. The results suggest that this method could be used to assess the environmental benefits of watershed or water-related PES programs, such as improvements in water quality, seasonal flow regulation, erosion and sedimentation, and aquatic habitat. Copyright © 2014 Elsevier B.V. All rights reserved.

  17. Caspian Sea International Environmental Security Game. Held at Carlisle Barracks, Pennsylvania on 16-17 November 1998

    DTIC Science & Technology

    1999-07-01

    Environmental Security . . . . . . . . . . . . . . . . . . . . 17 Robert E. Ebel Caspian Basin Oil and Gas: An Overview . . . . . . . . . . . 21 Brian R ...choke point near Baku, posing a threat to security of supply. 32 ENVIRONMENTAL BASELINE ANALYSIS OF THE CASPIAN SEA REGION BRIAN R . SHAW TERRY...up to 70% of the seasonal Caspian Sea level. Sources of water include runoff ( R ), precipitation (P), and groundwater flow (G); sink include

  18. Simultaneous analysis of perfluoroalkyl and polyfluoroalkyl substances including ultrashort-chain C2 and C3 compounds in rain and river water samples by ultra performance convergence chromatography.

    PubMed

    Yeung, Leo W Y; Stadey, Christopher; Mabury, Scott A

    2017-11-03

    An analytical method using ultra performance convergence chromatography (UPC 2 ) coupled to a tandem mass spectrometer operated in negative electrospray mode was developed to measure perfluoroalkyl and polyfluoroalkyl substances (PFASs) including the ultrashort-chain PFASs (C2-C3). Compared to the existing liquid chromatography tandem mass spectrometry method using an ion exchange column, the new method has a lower detection limit (0.4pg trifluoroacetate (TFA) on-column), narrower peak width (3-6s), and a shorter run time (8min). Using the same method, different classes of PFASs (e.g., perfluoroalkyl sulfonates (PFSAs) and perfluorinated carboxylates (PFCAs), perfluorinated phosphonates (PFPAs) and phosphinates (PFPiAs), polyfluoroalkyl phosphate diesters (diPAPs)) can be measured in a single analysis. Rain (n=2) and river water (n=2) samples collected in Toronto, ON, were used for method validation and application. Results showed that short-chain PFAS (C2-C7 PFCAs and C4 PFSA) contributed to over 80% of the detectable PFASs in rain samples and the C2-C3 PFASs alone accounted for over 40% of the total. Reports on environmental levels of these ultrashort-chain PFASs are relatively scarce. Relatively large contribution of these ultrashort-chain PFASs to the total PFASs indicate the need to include the measurement of short-chain PFASs, especially C2 and C3 PFASs, in environmental monitoring. The sources of TFA and other short-chain PFASs in the environment are not entirely clear. The newly developed analytical method may help further investigation on the sources and the environmental levels of these ultrashort-chain PFASs. Copyright © 2017 Elsevier B.V. All rights reserved.

  19. Potential Environmental Justice (EJ) areas in Region 2 based on 2000 Census [EPA.EJAREAS_2000

    EPA Pesticide Factsheets

    Potential Environmental Justice (EJ) areas in Region 2 . This dataset was derived from 2000 census data and based on the criteria setforth in the Region 2 Interim Environmental Justice Policy. The two criteria for Region 2's EJ demographic analysis are percent poverty and percent minority. The percent minority and percent poverty numbers for each blockgroup are compared to the benchmark value for the state. Census blockgroups with percent poverty or percent minority higher than the state threshold are considered potential EJ areas. The cutoffs for each state were derived by using the statistical method - cluster analysis.Cluster analysis was chosen as the most objective way of evaluating the demographic data and determining cutoff values for minority and low income. With cluster analysis, data are divided into two distinct groups (e.g., minority and non-minority, and low income and non-low income). Cluster analysis examines natural breaks of the data. Separate analyses were conducted for minority and low income, respectively, for each State. All census block groups within a State were ranked in descending order according to the demographic factor under evaluation. This resulted in a ranking for percent minority by block group and a separate ranking for percent low income by block group. An iterative process was employed where the data were (1) split into two groups; (2) the means for each of the two groups were calculated; (3) the difference between the

  20. Galileo environmental test and analysis program summary

    NASA Technical Reports Server (NTRS)

    Hoffman, A. R.

    1991-01-01

    This paper presents an overview of the Galileo Project's environmental test and analysis program during the spacecraft development phase - October 1978 through launch in October 1989. After describing the top-level objectives of the program, summaries of-the approach, requirements, and margins are provided. Examples of assembly- and system-level test results are given for both the pre-1986 (direct mission) testing and the post-1986 (Venus-Earth-Earth gravity assist mission) testing, including dynamic, thermal, electromagnetic compatibility (EMC), and magnetic. The approaches and results for verifying by analysis that the requirements of certain environments (e.g., radiation, micrometeoroids, and single event upsets) are satisfied are presented. The environmental program implemented on Galileo satisfied the spirit and intent of the requirements imposed by the Project during the spacecraft's development. The lessons learned from the Galileo environmental program are discussed in this paper.

  1. Analysis of Behavioral and Emotional Problems in Children Highlights the Role of Genotype × Environment Interaction.

    PubMed

    Molenaar, Dylan; Middeldorp, Christel; van Beijsterveldt, Toos; Boomsma, Dorret I

    2015-01-01

    This study tested for Genotype × Environment (G × E) interaction on behavioral and emotional problems in children using new methods that do not require identification of candidate genes or environments, can distinguish between interaction with shared and unique environment, and are insensitive to scale effects. Parental ratings of problem behavior from 14,755 twin pairs (5.3 years, SD = 0.22) indicated G × E interaction on emotional liability, social isolation, aggression, attention problems, dependency, anxiety, and physical coordination. Environmental influences increased in children who were genetically more predisposed to problem behavior, with ~20% of the variance due to G × E interaction (8% for anxiety to 37% for attention problems). Ignoring G × E interaction does not greatly bias heritability estimates, but it does offer a comprehensive model of the etiology for childhood problems. © 2015 The Authors. Child Development © 2015 Society for Research in Child Development, Inc.

  2. High levels of PAH-metabolites in urine of e-waste recycling workers from Agbogbloshie, Ghana.

    PubMed

    Feldt, Torsten; Fobil, Julius N; Wittsiepe, Jürgen; Wilhelm, Michael; Till, Holger; Zoufaly, Alexander; Burchard, Gerd; Göen, Thomas

    2014-01-01

    The informal recycling of electronic waste (e-waste) is an emerging source of environmental pollution in Africa. Among other toxins, polycyclic aromatic hydrocarbons (PAHs) are a major health concern for exposed individuals. In a cross-sectional study, the levels of PAH metabolites in the urine of individuals working on one of the largest e-waste recycling sites of Africa, and in controls from a suburb of Accra without direct exposure to e-waste recycling activities, were investigated. Socioeconomic data, basic health data and urine samples were collected from 72 exposed individuals and 40 controls. In the urine samples, concentrations of the hydroxylate PAH metabolites (OH-PAH) 1-hydroxyphenanthrene (1-OH-phenanthrene), the sum of 2- and 9-hydroxyphenanthrene (2-/9-OH-phenanthrene), 3-hydroxyphenanthrene (3-OH-phenanthrene), 4-hydroxyphenanthrene (4-OH-phenanthrene) and 1-hydroxypyrene (1-OH-pyrene), as well as cotinine and creatinine, were determined. In the exposed group, median urinary concentrations were 0.85 μg/g creatinine for 1-OH-phenanthrene, 0.54 μg/g creatinine for 2-/9-OH-phenanthrene, 0.99 μg/g creatinine for 3-OH-phenanthrene, 0.22 μg/g creatinine for 4-OH-phenanthrene, and 1.33 μg/g creatinine for 1-OH-pyrene, all being significantly higher compared to the control group (0.55, 0.37, 0.63, 0.11 and 0.54 μg/g creatinine, respectively). Using a multivariate linear regression analysis including sex, cotinine and tobacco smoking as covariates, exposure to e-waste recycling activities was the most important determinant for PAH exposure. On physical examination, pathological findings were rare, but about two thirds of exposed individuals complained about cough, and one quarter about chest pain. In conclusion, we observed significantly higher urinary PAH metabolite concentrations in individuals who were exposed to e-waste recycling compared to controls who were not exposed to e-waste recycling activities. The impact of e-waste recycling on exposure to environmental toxins and health of individuals living in the surroundings of e-waste recycling sites warrant further investigation. © 2013 Elsevier B.V. All rights reserved.

  3. Recovery and Utilization of Palm Oil Mill Effluent Source as Value-Added Food Products.

    PubMed

    Teh, Soek Sin; Hock Ong, Augustine Soon; Mah, Siau Hui

    2017-01-01

    The environmental impacts of palm oil mill effluent (POME) have been a concern due to the water pollution and greenhouse gases emissions. Thus, this study was conducted to recover the value-added products from POME source before being discharged. The samples, before (X) and after (Y) the pre-recovery system in the clarification tank were sampled and analysed and proximate analysis indicated that both samples are energy rich source of food due to high contents of fats and carbohydrates. GCMS analysis showed that the oil extracts contain predominantly palmitic, oleic, linoleic and stearic acids. Regiospecific analysis of oil extracts by quantitative 13 C-NMR spectroscopy demonstrated that both oil extracts contain similar degree of saturation of fatty acids at sn-2 and sn-1,3 positions. The samples are rich in various phytonutrients, pro-vitamin A, vitamin E, squalene and phytosterols, thus contributing to exceptionally high total flavonoid contents and moderate antioxidant activities. Overall, samples X and Y are good alternative food sources, besides reducing the environmental impact of POME.

  4. 43 CFR 3420.3-4 - Regional tract ranking, selection, environmental analysis and scheduling.

    Code of Federal Regulations, 2013 CFR

    2013-10-01

    ... coal team will make its determination after publishing notice in the Federal Register that the public... regional coal team will provide notice in the Federal Register of the date and location at least 45 days..., environmental analysis and scheduling. 3420.3-4 Section 3420.3-4 Public Lands: Interior Regulations Relating to...

  5. 43 CFR 3420.3-4 - Regional tract ranking, selection, environmental analysis and scheduling.

    Code of Federal Regulations, 2014 CFR

    2014-10-01

    ... coal team will make its determination after publishing notice in the Federal Register that the public... regional coal team will provide notice in the Federal Register of the date and location at least 45 days..., environmental analysis and scheduling. 3420.3-4 Section 3420.3-4 Public Lands: Interior Regulations Relating to...

  6. 43 CFR 3420.3-4 - Regional tract ranking, selection, environmental analysis and scheduling.

    Code of Federal Regulations, 2012 CFR

    2012-10-01

    ... coal team will make its determination after publishing notice in the Federal Register that the public... regional coal team will provide notice in the Federal Register of the date and location at least 45 days..., environmental analysis and scheduling. 3420.3-4 Section 3420.3-4 Public Lands: Interior Regulations Relating to...

  7. Growth chronology of Greenland Cockles (Serripes groenlandicus) from Bear Island, Svalbard, Norway

    NASA Astrophysics Data System (ADS)

    Carroll, Michael; Ambrose, William; Locke, William; Wanamaker, Alan

    2017-04-01

    Climate change is occurring rapidly in the Arctic, and observing the links between environmental drivers and biological effects can provide key information on the ecosystem consequences of climate change. Analysis of shell-based records of mollusks (sclerochronology) provides an effective and expanding approach to reconstructing environmental-ecological linkages. In particular, annually resolved archives can be key indicators of how climate change manifests in the marine ecosystem. We developed a master growth chronology of the Greenland Cockle (Serripes groenlandicus) from Bear Island (Bjørnøya), Svalbard, Norway (74°41'N, 18°56'E) from analysis of annual shell increments. The chronology was developed from 20 individuals ranging in age from 24 to 45 years old (the oldest known individuals of this species to date). The chronology, expressed as a standardized growth index (SGI), extended from 1968 to 2012 and exhibited a cyclical pattern, with decadal periods of high growth, alternating with slower growth intervals. We also identified significant relationships between large-scale climate regimes (e.g. NAO, AMO), local environmental conditions (e.g. sea temperature, sea ice), and shell growth. Additionally, growth chronologies, and environmental linkages were compared from this, near the southern extent of the Barents Sea polar front, with other Arctic locations influenced by different water masses to examine the nature of the environmental regulation on shell growth of this species in the Barents Sea and Arctic Ocean. We conclude that the Greenland Cockle is quite sensitive to environmental changes over annual to decadal scales and therefore can serve as a proxy of climate change effects on ecosystem processes in the Arctic.

  8. Dynamic assessment of urban economy-environment-energy system using system dynamics model: A case study in Beijing.

    PubMed

    Wu, Desheng; Ning, Shuang

    2018-07-01

    Economic development, accompanying with environmental damage and energy depletion, becomes essential nowadays. There is a complicated and comprehensive interaction between economics, environment and energy. Understanding the operating mechanism of Energy-Environment-Economy model (3E) and its key factors is the inherent part in dealing with the issue. In this paper, we combine System Dynamics model and Geographic Information System to analyze the energy-environment-economy (3E) system both temporally and spatially, which explicitly explore the interaction of economics, energy, and environment and effects of the key influencing factors. Beijing is selected as a case study to verify our SD-GIS model. Alternative scenarios, e.g., current, technology, energy and environment scenarios are explored and compared. Simulation results shows that, current scenario is not sustainable; technology scenario is applicable to economic growth; environment scenario maintains a balanced path of development for long term stability. Policy-making insights are given based on our results and analysis. Copyright © 2018 Elsevier Inc. All rights reserved.

  9. Detection of multiple cocirculating wild poliovirus type 1 lineages through environmental surveillance: impact and progress during 2011-2013 in Pakistan.

    PubMed

    Alam, Muhammad Masroor; Shaukat, Shahzad; Sharif, Salmaan; Angez, Mehar; Khurshid, Adnan; Malik, Farzana; Rehman, Lubna; Zaidi, Syed Sohail Zahoor

    2014-11-01

    The environmental surveillance has proven to be a useful tool to identify poliovirus circulation in different countries and was started in Pakistan during July 2009 to support the acute flaccid paralysis (AFP) surveillance system. Sewage samples were collected from 27 environmental sampling (ENV) sites and processed for poliovirus isolation through 2-phase separation method. Poliovirus isolates were identified as Sabin-like or wild type through real-time polymerase chain reaction (PCR). Wild-type strains were subjected to VP1 gene sequencing and phylogenetic analysis performed using MEGA 5.0. During 2011-2013, a total of 668 samples were collected from 4 provinces that resulted in 40% of samples positive for wild poliovirus type-1 (WPV-1). None of the samples were positive for WPV-3. The areas with high frequency of WPV-1 detection were Karachi-Gadap (69%), Peshawar (82%), and Rawalpindi (65%), whereas the samples from Quetta and Sukkur remained negative for WPV during 2013. Phylogenetic analysis revealed 3 major clusters with multiple poliovirus lineages circulating across different country areas as well as in bordering areas of Afghanistan. Environmental surveillance in Pakistan has been proven to be a powerful tool to detect WPV circulation in the absence of poliomyelitis cases in many communities. Our findings emphasize the need to continue and expand such surveillance activities to other high-risk areas in the country. © The Author 2014. Published by Oxford University Press on behalf of the Infectious Diseases Society of America. All rights reserved. For Permissions, please e-mail: journals.permissions@oup.com.

  10. An ion beam facility based on a 3 MV tandetron accelerator in Sichuan University, China

    NASA Astrophysics Data System (ADS)

    Han, Jifeng; An, Zhu; Zheng, Gaoqun; Bai, Fan; Li, Zhihui; Wang, Peng; Liao, Xiaodong; Liu, Mantian; Chen, Shunli; Song, Mingjiang; Zhang, Jun

    2018-03-01

    A new ion beam facility based on a 3 MV tandetron accelerator system has been installed in Sichuan University, China. The facility was developed by High Voltage Engineering Europa and consists of three high-energy beam lines including the ion beam analysis, ion implantation and nuclear physics experiment end stations, respectively. The terminal voltage stability of the accelerator is better than ±30 V, and the brightness of the proton beam is approximately 5.06 A/rad2/m2/eV. The system demonstrates a great application potential in fields such as nuclear, material and environmental studies.

  11. Characteristics of the personal and environmental components of person-environment fit in very old age: a comparison between people with self-reported Parkinson's disease and matched controls.

    PubMed

    Slaug, Björn; Nilsson, Maria H; Iwarsson, Susanne

    2013-12-01

    To investigate differences and similarities in person-environment (P-E) fit problems between very old people with self-reported Parkinson's disease (PD) and matched controls. Data collected for the cross-national ENABLE-AGE Survey Study were used to identify people with self-reported PD (n = 20), and to select three matched controls per individual (n = 60). The matching criteria were age (mean = 82 years), sex, country, and type of housing. The data analysis targeted P-E fit (i.e. accessibility) problems, including studying the personal and environmental components separately. The personal component was analyzed in terms of functional limitations, and the environmental component in terms of physical environmental barriers. In comparison to the matched controls, the participants with PD had more functional limitations, used more mobility devices and were subjected to more P-E fit problems, though the number of environmental barriers did not differ from the controls. In the PD sample, P-E fit problems were significantly stronger associated with poor balance and incoordination, and the environmental barriers that generated the most severe P-E fit problems were more often located to the exterior surroundings of the housing compared to the controls. The novel contribution of this explorative study is the demonstration of the type of knowledge that can be generated by unfolding and comparing the composition of P-E fit (accessibility) problems among people with self-reported PD as compared with matched controls. The knowledge thereby generated can be used to develop more targeted rehabilitation approaches, efficient housing adaptation services and societal planning for people with neurodegenerative disorders.

  12. Indoor Environmental Quality of Classrooms and Student Outcomes: A Path Analysis Approach

    ERIC Educational Resources Information Center

    Choi, SeonMi; Guerin, Denise A.; Kim, Hye-Young; Brigham, Jonee Kulman; Bauer, Theresa

    2014-01-01

    The purpose of this study was to investigate the relationship between indoor environmental quality (IEQ) in a set of university classrooms and students' outcomes, i.e., satisfaction with IEQ, perceived learning, and course satisfaction. Data collected from students (N = 631) of University of Minnesota were analyzed to test a hypothesized…

  13. LAI (in situ, simulated, Landsat-derived, and MODIS): A comparison within an Oak-Hickory Forest Complex in southwestern Virginia, USA.

    EPA Science Inventory

    The United States Environmental Protection Agency’s Environmental Sciences and Atmospheric Modeling Analysis Divisions are investigating the viability of simulated (i.e., ‘modeled’) leaf area index (LAI) inputs into various regional and local scale air quality models. Satellite L...

  14. Life-Cycle Inventory Analysis of Cellulosic Fiberboard Production in North America

    Treesearch

    Richard D. Bergman

    2014-01-01

    Documenting the environmental performance of building products is becoming widespread because of many green-marketing claims made without scientific merit (i.e., green-washing). Developing environmental product declarations (EPDs) for building products is one way to accomplish this objective for scientific documentation and to counter green-washing. EPDs are based on...

  15. Immunotoxicological Analysis of the Immune Adjuvant Effects of Source Specific Diesel and Environmental Ambient Particulate Matter in a Murine Sensitization And Challenge Model.

    EPA Science Inventory

    Rationale: Acute exposure to ambient particulate matter (APM) provokes oxidative and inflammatory lung activation in vivo. Here, we test the hypothesis that environmental diesel exhaust particles (eDEP), emission source-specific DEP (cDEP) and APM differentially provoke an allerg...

  16. Analysis of the Impact of Papers Published in Environmental Toxicology and Chemistry over the Past 30 Years: An Overview and Coming Attractions

    EPA Science Inventory

    Editorial in Environmental Toxicology and Chemistry (ET&C) about the SETAC Publications Advisory Committee (PAC), which is involved in number of activities related to SETAC publications, including books, the Globe (society newsletter) and the two society-sponsored journals, E...

  17. Influence of water temperature on acetylcholinesterase activity in the pacific tree frog (Hyla regilla)

    USGS Publications Warehouse

    Johnson, Catherine S.; Schwarzbach, Steven E.; Henderson, John D.; Wilson, Barry W.; Tjeerdema, Ronald S.

    2005-01-01

    This investigation evaluated whether acetylcholinesterase (AChE) in Pacific tree frogs (Hyla regilla) from different geographical locations was influenced by different temperatures during early aquatic life stages, independent of pesticide exposure. Tadpoles were collected from both a California coastal pond and a Sierra Nevada mountain range pond, USA. Groups of frogs from each location were raised in temperatures representative of either the Sierra Nevada (8°C) or the coastal (19°C) location. Metamorphs from both locations raised as tadpoles at 19°C had AChE activities of 42.3 and 38.7 nm/min/mg protein, while those raised as tadpoles at 8°C had activities of 26.9 and 28.2 nm/min/mg protein. A two-way analysis of variance revealed temperature to be the significant factor in determining AChE activity (F = 22.3, p < 0.001), although origin was not important (F = 0.09, p = 0.75). Interpretations regarding the influence of pesticides upon AChE activity in Pacific tree frogs must consider the influence of environmental temperature to enable cross-population comparisons.

  18. 4E analysis and multi objective optimization of a micro gas turbine and solid oxide fuel cell hybrid combined heat and power system

    NASA Astrophysics Data System (ADS)

    Sanaye, Sepehr; Katebi, Arash

    2014-02-01

    Energy, exergy, economic and environmental (4E) analysis and optimization of a hybrid solid oxide fuel cell and micro gas turbine (SOFC-MGT) system for use as combined generation of heat and power (CHP) is investigated in this paper. The hybrid system is modeled and performance related results are validated using available data in literature. Then a multi-objective optimization approach based on genetic algorithm is incorporated. Eight system design parameters are selected for the optimization procedure. System exergy efficiency and total cost rate (including capital or investment cost, operational cost and penalty cost of environmental emissions) are the two objectives. The effects of fuel unit cost, capital investment and system power output on optimum design parameters are also investigated. It is observed that the most sensitive and important design parameter in the hybrid system is fuel cell current density which has a significant effect on the balance between system cost and efficiency. The selected design point from the Pareto distribution of optimization results indicates a total system exergy efficiency of 60.7%, with estimated electrical energy cost 0.057 kW-1 h-1, and payback period of about 6.3 years for the investment.

  19. Models for Analyzing Environmental Issues in the Classroom.

    ERIC Educational Resources Information Center

    Chiras, Daniel D.

    1980-01-01

    Presents several conceptual models dealing with issues in environmental education. Models described are: (1) Population/Resources/Pollution, (2) Cause-and-Effect Analysis, and (3) Ethical Analysis. (CS)

  20. Comparison of five in vitro bioassays to measure estrogenic activity in environmental waters.

    PubMed

    Leusch, Frederic D L; de Jager, Christiaan; Levi, Yves; Lim, Richard; Puijker, Leo; Sacher, Frank; Tremblay, Louis A; Wilson, Vickie S; Chapman, Heather F

    2010-05-15

    Bioassays are well established in the pharmaceutical industry and single compound analysis, but there is still uncertainty about their usefulness in environmental monitoring. We compared the responses of five bioassays designed to measure estrogenic activity (the yeast estrogen screen, ER-CALUX, MELN, T47D-KBluc, and E-SCREEN assays) and chemical analysis on extracts from four different water sources (groundwater, raw sewage, treated sewage, and river water). All five bioassays displayed similar trends and there was good agreement with analytical chemistry results. The data from the ER-CALUX and E-SCREEN bioassays were robust and predictable, and well-correlated with predictions from chemical analysis. The T47D-KBluc appeared likewise promising, but with a more limited sample size it was less compelling. The YES assay was less sensitive than the other assays by an order of magnitude, which resulted in a larger number of nondetects. The MELN assay was less predictable, although the possibility that this was due to laboratory-specific difficulties cannot be discounted. With standardized bioassay data analysis and consistency of operating protocols, bioanalytical tools are a promising advance in the development of a tiered approach to environmental water quality monitoring.

  1. Seasonal influence of environmental variables and artificial aeration on Escherichia coli in small urban lakes.

    PubMed

    Durham, Bart W; Porter, Lucy; Webb, Allie; Thomas, Joshua

    2016-12-01

    This study investigated patterns of Escherichia coli in urban lakes in Lubbock, Texas. Specific objectives were to (1) document seasonal patterns in abundance of E. coli over a 3-year period, (2) identify environmental factors, including effects of migratory geese and artificial aeration devices that may influence E. coli abundance, and (3) determine if E. coli abundance over time was similar for individual lakes. Water samples were collected monthly for 36 months from six lakes, three of which contained artificial aeration devices (fountains). Regression models were constructed to determine which environmental variables most influence E. coli abundance in summer and winter seasons. Escherichia coli is present in the lakes of Lubbock, Texas year-round and typically exceeds established bacterial thresholds for recreational waters. Models most frequently contained pH and dissolved oxygen as predictor variables and explained from 17.4% to 92.4% of total variation in E. coli. Lakes with fountains had a higher oxygen concentration during summer and contained consistently less E. coli. We conclude that solar irradiation in synergy with pH and dissolved oxygen is the primary control mechanism for E. coli in study lakes, and that fountains help control abundance of fecal bacteria within these systems.

  2. Environmental stressors during space flight: potential effects on body temperature

    NASA Technical Reports Server (NTRS)

    Jauchem, J. R.

    1988-01-01

    1. Organisms may be affected by many environmental factors during space flight, e.g., acceleration, weightlessness, decreased pressure, changes in oxygen tension, radiofrequency radiation and vibration. 2. Previous studies of change in body temperature--one response to these environmental factors--are reviewed. 3. Conditions leading to heat stress and hypothermia are discussed.

  3. 76 FR 79227 - Exemption Request Submitted by Oyster Creek Nuclear Generating Station; Exelon Generation Company...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-12-21

    ... Commission. ACTION: Environmental assessment and finding of no significant impact. SUPPLEMENTARY INFORMATION... included as Attachment 3 to the licensee's exemption request. Environmental Impacts of the Proposed Action... any environmental impacts that would be incurred by performance of the drill (e.g., use of roads or...

  4. Environmental emission of multiresistant Escherichia coli carrying the colistin resistance gene mcr-1 from German swine farms.

    PubMed

    Guenther, Sebastian; Falgenhauer, Linda; Semmler, Torsten; Imirzalioglu, Can; Chakraborty, Trinad; Roesler, Uwe; Roschanski, Nicole

    2017-05-01

    Pigs have been the focus of the worldwide spread of colistin resistance. However, there is little information on the transmission of mcr-1 -containing bacteria into the environment of pig farms. We therefore rescreened environmental Escherichia coli isolates from the surrounding farm areas of three previously mcr-1 -positive swine herds in Germany. Thirty-five mixed bacterial cultures obtained from boot swabs, flies, dog faeces and manure from three pig farms in Germany in 2011-12 were non-selectively recultivated and the presence of the mcr-1 gene was checked by real-time PCR. After separation, single E. coli colonies were subsequently isolated and the presence of mcr-1 was confirmed by PCR and sequencing. In addition, phenotypic antimicrobial resistance screening and WGS followed by phylogenetic analysis and resistance genotyping as well as plasmid typing were performed. Seven mcr-1 -positive E. coli strains originating from environmental boot swabs, dog faeces, stable flies and manure were found. The isolates belonged to five different STs (ST10, ST1011, ST1140, ST5281 and ST342) and harboured extensive additional resistance genes. Comparative plasmid analysis predominantly located mcr-1 on IncX4 plasmids, which are strongly related to a recently described plasmid of human clinical origin (pICBEC72Hmcr). WGS-based analysis of the environmental E. coli isolates of farm surroundings showed clear links to mcr-1 -harbouring E. coli recovered from pig production in Europe as well as from human clinical isolates worldwide, presenting another piece of the puzzle, which further complicates the rapidly evolving epidemiology of plasmid-mediated colistin-resistant E. coli strains. © The Author 2017. Published by Oxford University Press on behalf of the British Society for Antimicrobial Chemotherapy. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

  5. 48 CFR 923.002 - Policy.

    Code of Federal Regulations, 2010 CFR

    2010-10-01

    ..., CONSERVATION, OCCUPATIONAL SAFETY, AND DRUG-FREE WORKPLACE 923.002 Policy. (a) Requirement. FAR 23.002 and Section 3(e) of Executive Order 13423, Strengthening Federal Environmental, Energy and Transportation..., Strengthening Federal Environmental, Energy, and Transportation Management, in contracts for Contractor...

  6. 43 CFR 3420.3-4 - Regional tract ranking, selection, environmental analysis and scheduling.

    Code of Federal Regulations, 2011 CFR

    2011-10-01

    ... 43 Public Lands: Interior 2 2011-10-01 2011-10-01 false Regional tract ranking, selection...) COMPETITIVE LEASING Competitive Leasing § 3420.3-4 Regional tract ranking, selection, environmental analysis... natural environment; and socioeconomic impacts. The subfactors the regional coal team will consider under...

  7. Electromagnetic Environmental Effects System Testing

    DTIC Science & Technology

    2009-09-02

    Procedure (TOP) 1-2-511 Electromagnetic Environmental Effects System Testing 5a. CONTRACT NUMBER 5b. GRANT NUMBER 5c. PROGRAM ELEMENT NUMBER...airborne, sea, space, and ground systems , including associated ordnance, as stated in military standard (MIL-STD)-464A “Electromagnetic Environmental...Effects Requirement for Systems ”, as well as ADS-37A-PRF “Aeronautical Design Standard for the Electromagnetic Environmental Effects (E3) Performance and

  8. Prevalence and characterization of Escherichia coli isolated from the Upper Oconee Watershed in Northeast Georgia

    PubMed Central

    Cho, Sohyun; Hiott, Lari M.; Barrett, John B.; McMillan, Elizabeth A.; House, Sandra L.; Humayoun, Shaheen B.; Adams, Eric S.; Jackson, Charlene R.

    2018-01-01

    Surface waters are important sources of water for drinking, industrial, agricultural, and recreational uses; hence, contamination of water by fecal, pathogenic, or antimicrobial resistant (AR) bacteria is a major environmental and public health concern. However, very little data is available on prevalence of these bacteria in surface water throughout a watershed. This study aimed to characterize Escherichia coli present in the Upper Oconee Watershed, a mixed-use watershed in Athens, GA, USA for potential pathogenicity and AR. E. coli were enumerated by colony counts, cultured by enrichment and direct plating, and characterized by phylo-groups, diarrheagenic pathotypes, and antimicrobial susceptibility. From the analysis, 99.3% (455/458) of the total samples were positive for E. coli resulting in 496 isolates. E. coli counts were as high as 1.2×104 CFU/100 ml, which is above the United States Environmental Protection Agency (U.S. EPA) threshold for recreational water (235 CFU/100 ml based on a one-time measurement). Phylo-groups B2 (31.7%; 157/496) and B1 (30.8%; 153/496) were the most prevalent among the isolates. Enteropathogenic E. coli (EPEC) (19/496) and Shiga toxin-producing E. coli (STEC) (1/496) were the only diarrheagenic pathotypes detected. AR was observed in 6.9% (34/496) of the isolates, 15 of which were multidrug resistant (MDR; resistance to two or more classes of antimicrobials). Tetracycline resistance was most often detected (76.5%; 26/34), followed by ampicillin (32.4%; 11/34), streptomycin (23.5%; 8/34), sulfisoxazole (23.5%; 8/34), and nalidixic acid (14.7%; 5/34). Results from this study showed that E. coli is prevalent in high levels in the Upper Oconee Watershed, suggesting possible widespread fecal contamination. The presence of pathogenic, AR E. coli in the watershed indicates that environmental water can serve as a reservoir of resistant bacteria that may be transferred to humans through drinking and recreational activities. PMID:29738574

  9. Prevalence and characterization of Escherichia coli isolated from the Upper Oconee Watershed in Northeast Georgia.

    PubMed

    Cho, Sohyun; Hiott, Lari M; Barrett, John B; McMillan, Elizabeth A; House, Sandra L; Humayoun, Shaheen B; Adams, Eric S; Jackson, Charlene R; Frye, Jonathan G

    2018-01-01

    Surface waters are important sources of water for drinking, industrial, agricultural, and recreational uses; hence, contamination of water by fecal, pathogenic, or antimicrobial resistant (AR) bacteria is a major environmental and public health concern. However, very little data is available on prevalence of these bacteria in surface water throughout a watershed. This study aimed to characterize Escherichia coli present in the Upper Oconee Watershed, a mixed-use watershed in Athens, GA, USA for potential pathogenicity and AR. E. coli were enumerated by colony counts, cultured by enrichment and direct plating, and characterized by phylo-groups, diarrheagenic pathotypes, and antimicrobial susceptibility. From the analysis, 99.3% (455/458) of the total samples were positive for E. coli resulting in 496 isolates. E. coli counts were as high as 1.2×104 CFU/100 ml, which is above the United States Environmental Protection Agency (U.S. EPA) threshold for recreational water (235 CFU/100 ml based on a one-time measurement). Phylo-groups B2 (31.7%; 157/496) and B1 (30.8%; 153/496) were the most prevalent among the isolates. Enteropathogenic E. coli (EPEC) (19/496) and Shiga toxin-producing E. coli (STEC) (1/496) were the only diarrheagenic pathotypes detected. AR was observed in 6.9% (34/496) of the isolates, 15 of which were multidrug resistant (MDR; resistance to two or more classes of antimicrobials). Tetracycline resistance was most often detected (76.5%; 26/34), followed by ampicillin (32.4%; 11/34), streptomycin (23.5%; 8/34), sulfisoxazole (23.5%; 8/34), and nalidixic acid (14.7%; 5/34). Results from this study showed that E. coli is prevalent in high levels in the Upper Oconee Watershed, suggesting possible widespread fecal contamination. The presence of pathogenic, AR E. coli in the watershed indicates that environmental water can serve as a reservoir of resistant bacteria that may be transferred to humans through drinking and recreational activities.

  10. DEVELOPMENTAL TOXICITY EVALUATION OF WATER FROM ALTERNATIVE DISINFECTION SCENARIOS

    EPA Science Inventory

    NAROTSKY1, M.G., D.S. BEST1, E.H. ROGERS1, A. McDONALD1, Y.M. SEY1, E.S. HUNTER III 1, L.K. TEUSCHLER2, R.J. MILTNER3, T.F. SPETH3, G. RICE2, K.M. SCHENCK3, S.D. RICHARDSON4, M.C. MARR5, and J.E. SIMMONS1. 1US Environmental Protection Agency (EPA), National Health and Environment...

  11. Biomonitoring of marine vertebrates in Monterey Bay using eDNA metabarcoding.

    PubMed

    Andruszkiewicz, Elizabeth A; Starks, Hilary A; Chavez, Francisco P; Sassoubre, Lauren M; Block, Barbara A; Boehm, Alexandria B

    2017-01-01

    Molecular analysis of environmental DNA (eDNA) can be used to assess vertebrate biodiversity in aquatic systems, but limited work has applied eDNA technologies to marine waters. Further, there is limited understanding of the spatial distribution of vertebrate eDNA in marine waters. Here, we use an eDNA metabarcoding approach to target and amplify a hypervariable region of the mitochondrial 12S rRNA gene to characterize vertebrate communities at 10 oceanographic stations spanning 45 km within the Monterey Bay National Marine Sanctuary (MBNMS). In this study, we collected three biological replicates of small volume water samples (1 L) at 2 depths at each of the 10 stations. We amplified fish mitochondrial DNA using a universal primer set. We obtained 5,644,299 high quality Illumina sequence reads from the environmental samples. The sequence reads were annotated to the lowest taxonomic assignment using a bioinformatics pipeline. The eDNA survey identified, to the lowest taxonomic rank, 7 families, 3 subfamilies, 10 genera, and 72 species of vertebrates at the study sites. These 92 distinct taxa come from 33 unique marine vertebrate families. We observed significantly different vertebrate community composition between sampling depths (0 m and 20/40 m deep) across all stations and significantly different communities at stations located on the continental shelf (<200 m bottom depth) versus in the deeper waters of the canyons of Monterey Bay (>200 m bottom depth). All but 1 family identified using eDNA metabarcoding is known to occur in MBNMS. The study informs the implementation of eDNA metabarcoding for vertebrate biomonitoring.

  12. Flight Crew Sleep in Long-Haul Aircraft Bunk Facilities: Survey Results

    NASA Technical Reports Server (NTRS)

    Rosekind, Mark R.; Miller, Donna L.; Gregory, Kevin B.; Dinges, David F.; Shafto, Michael G. (Technical Monitor)

    1995-01-01

    Modem long-haul aircraft can fly up to 16 continuous hours and provide a 24-hour, global capability. Extra (augmented) flight crew are available on long flights to allow planned rest periods, on a rotating basis, away from the flight deck in onboard crew rest facilities (2 bunks). A NASA/FAA study is under-way to examine the quantity and quality of sleep obtained in long-haul aircraft bunks and the factors that promote or interfere with that sleep. The first phase of the study involved a retrospective survey, followed by a second phase field study to collect standard polysomnographic data during inflight bunk sleep periods. A summary of the Phase I survey results are reported here. A multi-part 54-question retrospective survey was completed by 1,404 flight crew (37% return rate) at three different major US air carriers flying B747-100, 200, 400, and MD- 11 long-haul aircraft. The questions examined demographics, quantity and quality of sleep at home and in onboard bunks, factors that promote or interfere with sleep, and effects on subsequent performance and alertness. Flight crew reported a mean bunk sleep latency of 39.4 mins (SD=28.3 mins) (n=1,276) and a mean total sleep time of 2.2 hrs (SD=1.3 hrs) (n=603). (Different flight lengths could affect overall time available for sleep.) Crew rated 25 factors for their interference or promotion of bunk sleep. Figure I portrays the average ratings for each factor across all three carriers. A principal components analysis of the 25 factors revealed three areas that promoted bunk sleep: physiological (e.g., readiness for sleep), physical environment (e.g., bunk size, privacy), and personal comfort (e.g., blankets, pillows). Five areas were identified that interfered with sleep: environmental disturbance (e.g., background noise, turbulence), luminosity (e.g., lighting), personal disturbances (e.g., bathroom trips, random thoughts), environmental discomfort (e.g., low humidity, cold), and interpersonal disturbances (e.g., bunk partner).

  13. Desorption of 1,3,5-Trichlorobenzene from Multi-Walled Carbon Nanotubes: Impact of Solution Chemistry and Surface Chemistry

    PubMed Central

    Ma, Xingmao; Uddin, Sheikh

    2013-01-01

    The strong affinity of carbon nanotubes (CNTs) to environmental contaminants has raised serious concern that CNTs may function as a carrier of environmental pollutants and lead to contamination in places where the environmental pollutants are not expected. However, this concern will not be realized until the contaminants are desorbed from CNTs. It is well recognized that the desorption of environmental pollutants from pre-laden CNTs varies with the environmental conditions, such as the solution pH and ionic strength. However, comprehensive investigation on the influence of solution chemistry on the desorption process has not been carried out, even though numerous investigations have been conducted to investigate the impact of solution chemistry on the adsorption of environmental pollutants on CNTs. The main objective of this study was to determine the influence of solution chemistry (e.g., pH, ionic strength) and surface functionalization on the desorption of preloaded 1,3,5-trichlorobenzene (1,3,5-TCB) from multi-walled carbon nanotubes (MWNTs). The results suggested that higher pH, ionic strength and natural organic matter in solution generally led to higher desorption of 1,3,5-TCB from MWNTs. However, the extent of change varied at different values of the tested parameters (e.g., pH < 7 vs. pH > 7). In addition, the impact of these parameters varied with MWNTs possessing different surface functional groups, suggesting that surface functionalization could considerably alter the environmental behaviors and impact of MWNTs. PMID:28348336

  14. Economic optimal nitrogen application rates for rice cropping in the Taihu Lake region of China: taking account of negative externalities

    NASA Astrophysics Data System (ADS)

    Xia, Y.; Yan, X.

    2011-07-01

    Nitrogen application rates (NARs) is often overestimated over the rice (Oryza sativa L.) growing season in the Taihu Lake region of China. This is largely because only individual nitrogen (N) losses are taken into account, or the inventory flows of reactive N have been limited solely to the farming process when evaluating environmental and economic effects of N fertilizer. Since N can permeate the ecosystem in numerous forms commencing from the acquisition of raw material, through manufacturing and use, to final losses in the farming process (e.g., N2O, NH3, NO3- leaching, etc.), the costs incurred also accumulate and should be taken into account if economically-optimal N rates (EONRs) are to be established. This study integrates important material and energy flows resulting from N use into a rice agricultural inventory that constitutes the hub of the life-cycle assessment (LCA) method. An economic evaluation is used to determine an environmental and economic NAR for the Taihu Lake region. The analysis reveals that production and exploitation processes consume the largest proportion of resources, accounting for 77.2 % and 22.3 % of total resources, respectively. Regarding environmental impact, global warming creates the highest cost with contributions stemming mostly from fertilizer production and raw material exploitation processes. Farming process incurs the biggest environmental impact of the three environmental impact categories considered, whereas transportation has a much smaller effect. When taking account of resource consumption and environmental cost, the marginal benefit of 1 kg rice would decrease from 2.4 to only 1.01 yuan. Accordingly, our current EONR has been evaluated at 185 kg N ha-1 for a single rice-growing season. This could enhance profitability, as well as reduce the N losses associated with rice growing.

  15. Measures of the environmental footprint of the front end of the nuclear fuel cycle

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    E. Schneider; B. Carlsen; E. Tavrides

    2013-11-01

    Previous estimates of environmental impacts associated with the front end of the nuclear fuel cycle (FEFC) have focused primarily on energy consumption and CO2 emissions. Results have varied widely. This work builds upon reports from operating facilities and other primary data sources to build a database of front end environmental impacts. This work also addresses land transformation and water withdrawals associated with the processes of the FEFC. These processes include uranium extraction, conversion, enrichment, fuel fabrication, depleted uranium disposition, and transportation. To allow summing the impacts across processes, all impacts were normalized per tonne of natural uranium mined as wellmore » as per MWh(e) of electricity produced, a more conventional unit for measuring environmental impacts that facilitates comparison with other studies. This conversion was based on mass balances and process efficiencies associated with the current once-through LWR fuel cycle. Total energy input is calculated at 8.7 x 10- 3 GJ(e)/MWh(e) of electricity and 5.9 x 10- 3 GJ(t)/MWh(e) of thermal energy. It is dominated by the energy required for uranium extraction, conversion to fluoride compound for subsequent enrichment, and enrichment. An estimate of the carbon footprint is made from the direct energy consumption at 1.7 kg CO2/MWh(e). Water use is likewise dominated by requirements of uranium extraction, totaling 154 L/MWh(e). Land use is calculated at 8 x 10- 3 m2/MWh(e), over 90% of which is due to uranium extraction. Quantified impacts are limited to those resulting from activities performed within the FEFC process facilities (i.e. within the plant gates). Energy embodied in material inputs such as process chemicals and fuel cladding is identified but not explicitly quantified in this study. Inclusion of indirect energy associated with embodied energy as well as construction and decommissioning of facilities could increase the FEFC energy intensity estimate by a factor of up to 2.« less

  16. The relationship between magnetic parameters and heavy metal contents of indoor dust in e-waste recycling impacted area, Southeast China.

    PubMed

    Zhu, Zongmin; Han, Zhixuan; Bi, Xiangyang; Yang, Wenlin

    2012-09-01

    Environmental contamination due to uncontrolled e-waste recycling is an emerging global problem. The aim of this study is to test the applicability of magnetic methods for detecting the metal pollutants emitted from e-waste recycling activities. Dust samples collected from a typical e-waste recycling region in Guiyu, Guangdong Province, China, were investigated using magnetic, geochemical, micro-morphological and mineralogical analysis. The values of mass-specific susceptibility (χ) and saturation isothermal remanent magnetization (SIRM) in dusts from e-waste recycling impacted areas ranged from 101 to 636×10(-8) m(3) kg(-1) and from 10.5 to 85.2×10(-3) Am(2) kg(-1), respectively. There was a significant correlation between SIRM and χ (r(2)=0.747, p<0.001), indicating that ferrimagnetic minerals were dominating χ in the dust samples. The values of χ(fd)% varied from 2.6 to 4.6% with a mean of 3.4%, which suggested that magnetic carriers in the dusts are predominately coarse-grained particles. Two shapes of magnetic particles, spherule (10-150 μm) and angular-shaped particles (30-300 μm), were identified by scanning electron microscope (SEM) and energy dispersive X-ray spectrometer (EDX) analyses. κ-T curves, magnetic hysteresis loops and X-ray diffraction (XRD) analysis indicated that these magnetic particles were magnetite and goethite. There were significant correlations between SIRM and heavy metals (especially Cd, Co, Fe, Ni and Zn) as well as the Tomlinson pollution load index (PLI) of the dust, indicating that SIRM can be used as an efficient proxy for metal pollution in the e-waste recycling impacted area. Copyright © 2012 Elsevier B.V. All rights reserved.

  17. PHENOALP: a new project on phenology in the Western Alps

    NASA Astrophysics Data System (ADS)

    Cremonese, E.

    2009-04-01

    PHENOALP is a new EU co-funded Interreg Project under the operational programme for cross-border cooperation "Italy-France (Alps-ALCOTRA)" 2007 - 2013, aiming to get a better understanding of phenological changes in the Alps. The major goals of the project are: 1- The implementation of an observation network in the involved territories (i.e. the Aosta Valley and the Savoies in the Western Alps); 2- The definition of a common observation strategy and common protocols; 3- The involvement of local community members (e.g. through schools) in the observation activities as a way to increase the awareness on the issue of the effects of climate change. Project leader is the Environmental Protection Agency of Aosta Valley (ARPA Valle d'Aosta - IT) and the partners are the Research Center on High Altitude Ecosystem (CREA - FR), Mont Avic Regional Parc (IT), Bauges Massif Regional Natural Parc (FR) and the Protected Area Service of Aosta Valley (IT). Project activities are: 1. Pheno-plantes: definition of common observation protocols (e.g. field observation and webcams) of different alpine species (trees and herbaceous) and implementation of the observation network; analysis of the relations between climate and phenological events; application and evaluation of phenological models. 2. Pheno-detection: remote sensing of European larch and high elevation pastures with MODIS data; multitemporal analysis (2000-2011) of phenological variations in the Western Alps. 3. Pheno-flux: analysis of the relation between the seasonal and interannual variability of plant phenology and productivity, assessed measuring CO2 fluxes (eddy-covariance technique), radiometric indexes and phenological events at specific (European larch stand and alpine pastures) monitoring site. 4. Pheno-zoo: definition of common observation protocols for the phenology of animal taxa (birds, mammals, amphibians and insects) along altitudinal gradients; implementation of the observation network. 5. Inter-pheno: integrated analysis of the relationships between plants and animals phenology and their relation with climatic and other environmental conditions. 6. Meteo-reseau: implementation of a monitoring network of temperature data in the sites where phenological observations are done. 7. Pheno-form: involvement of community members (e.g. schools, naturalistic guides, ...) in the observations and diffusion of results. During the conference, details on project structures, methodology and expected outcomes will be exposed and discussed.

  18. Blood Cadmium and Lead and Chronic Kidney Disease in US Adults: A Joint Analysis

    PubMed Central

    Navas-Acien, Ana; Tellez-Plaza, Maria; Guallar, Eliseo; Muntner, Paul; Silbergeld, Ellen; Jaar, Bernard

    2009-01-01

    Environmental cadmium and lead exposures are widespread, and both metals are nephrotoxic at high exposure levels. Few studies have evaluated the associations between low-level cadmium and clinical renal outcomes, particularly with respect to joint cadmium and lead exposure. The geometric mean levels of blood cadmium and lead were 0.41 μg/L (3.65 nmol/L) and 1.58 μg/dL (0.076 μmol/L), respectively, in 14,778 adults aged ≥20 years who participated in the National Health and Nutrition Examination Survey (1999–2006). After adjustment for survey year, sociodemographic factors, chronic kidney disease risk factors, and blood lead, the odds ratios for albuminuria (≥30 mg/g creatinine), reduced estimated glomerular filtration rate (eGFR) (<60 mL/minute/1.73 m2), and both albuminuria and reduced eGFR were 1.92 (95% confidence interval (CI): 1.53, 2.43), 1.32 (95% CI: 1.04, 1.68), and 2.91 (95% CI: 1.76, 4.81), respectively, comparing the highest with the lowest blood cadmium quartiles. The odds ratios comparing participants in the highest with the lowest quartiles of both cadmium and lead were 2.34 (95% CI: 1.72, 3.18) for albuminuria, 1.98 (95% CI: 1.27, 3.10) for reduced eGFR, and 4.10 (95% CI: 1.58, 10.65) for both outcomes. These findings support consideration of cadmium and lead as chronic kidney disease risk factors in the general population and provide novel evidence of risk with environmental exposure to both metals. PMID:19700501

  19. Analysis of the Growth Process of Neural Cells in Culture Environment Using Image Processing Techniques

    NASA Astrophysics Data System (ADS)

    Mirsafianf, Atefeh S.; Isfahani, Shirin N.; Kasaei, Shohreh; Mobasheri, Hamid

    Here we present an approach for processing neural cells images to analyze their growth process in culture environment. We have applied several image processing techniques for: 1- Environmental noise reduction, 2- Neural cells segmentation, 3- Neural cells classification based on their dendrites' growth conditions, and 4- neurons' features Extraction and measurement (e.g., like cell body area, number of dendrites, axon's length, and so on). Due to the large amount of noise in the images, we have used feed forward artificial neural networks to detect edges more precisely.

  20. Additive gene-environment effects on hippocampal structure in healthy humans.

    PubMed

    Rabl, Ulrich; Meyer, Bernhard M; Diers, Kersten; Bartova, Lucie; Berger, Andreas; Mandorfer, Dominik; Popovic, Ana; Scharinger, Christian; Huemer, Julia; Kalcher, Klaudius; Pail, Gerald; Haslacher, Helmuth; Perkmann, Thomas; Windischberger, Christian; Brocke, Burkhard; Sitte, Harald H; Pollak, Daniela D; Dreher, Jean-Claude; Kasper, Siegfried; Praschak-Rieder, Nicole; Moser, Ewald; Esterbauer, Harald; Pezawas, Lukas

    2014-07-23

    Hippocampal volume loss has been related to chronic stress as well as genetic factors. Although genetic and environmental variables affecting hippocampal volume have extensively been studied and related to mental illness, limited evidence is available with respect to G × E interactions on hippocampal volume. The present MRI study investigated interaction effects on hippocampal volume between three well-studied functional genetic variants (COMT Val158Met, BDNF Val66Met, 5-HTTLPR) associated with hippocampal volume and a measure of environmental adversity (life events questionnaire) in a large sample of healthy humans (n = 153). All three variants showed significant interactions with environmental adversity with respect to hippocampal volume. Observed effects were additive by nature and driven by both recent as well as early life events. A consecutive analysis of hippocampal subfields revealed a spatially distinct profile for each genetic variant suggesting a specific role of 5-HTTLPR for the subiculum, BDNF Val66Met for CA4/dentate gyrus, and COMT Val158Met for CA2/3 volume changes. The present study underscores the importance of G × E interactions as determinants of hippocampal volume, which is crucial for the neurobiological understanding of stress-related conditions, such as mood disorders or post-traumatic stress disorder (PTSD). Copyright © 2014 the authors 0270-6474/14/349917-10$15.00/0.

  1. 49 CFR 1105.5 - Determinative criteria.

    Code of Federal Regulations, 2010 CFR

    2010-10-01

    ... environmental analysis under the National Environmental Policy Act or historic review under the National... under 16 U.S.C. 1247(d) [see, 49 CFR 1152.29]; or (3) Financial assistance arrangements under 49 U.S.C. 10905 (see 49 CFR 1152.27). Finally, no environmental analysis is necessary for abandonments that are...

  2. Genetic and Environmental Basis in Phenotype Correlation Between Physical Function and Cognition in Aging Chinese Twins.

    PubMed

    Xu, Chunsheng; Zhang, Dongfeng; Tian, Xiaocao; Wu, Yili; Pang, Zengchang; Li, Shuxia; Tan, Qihua

    2017-02-01

    Although the correlation between cognition and physical function has been well studied in the general population, the genetic and environmental nature of the correlation has been rarely investigated. We conducted a classical twin analysis on cognitive and physical function, including forced expiratory volume in one second (FEV1), forced vital capacity (FVC), handgrip strength, five-times-sit-to-stand test (FTSST), near visual acuity, and number of teeth lost in 379 complete twin pairs. Bivariate twin models were fitted to estimate the genetic and environmental correlation between physical and cognitive function. Bivariate analysis showed mildly positively genetic correlations between cognition and FEV1, r G = 0.23 [95% CI: 0.03, 0.62], as well as FVC, r G = 0.35 [95% CI: 0.06, 1.00]. We found that FTSST and cognition presented very high common environmental correlation, r C = -1.00 [95% CI: -1.00, -0.57], and low but significant unique environmental correlation, r E = -0.11 [95% CI: -0.22, -0.01], all in the negative direction. Meanwhile, near visual acuity and cognition also showed unique environmental correlation, r E = 0.16 [95% CI: 0.03, 0.27]. We found no significantly genetic correlation for cognition with handgrip strength, FTSST, near visual acuity, and number of teeth lost. Cognitive function was genetically related to pulmonary function. The FTSST and cognition shared almost the same common environmental factors but only part of the unique environmental factors, both with negative correlation. In contrast, near visual acuity and cognition may positively share part of the unique environmental factors.

  3. Sensitivity Analysis of QSAR Models for Assessing Novel Military Compounds

    DTIC Science & Technology

    2009-01-01

    ER D C TR -0 9 -3 Strategic Environmental Research and Development Program Sensitivity Analysis of QSAR Models for Assessing Novel...Environmental Research and Development Program ERDC TR-09-3 January 2009 Sensitivity Analysis of QSAR Models for Assessing Novel Military Compound...Jay L. Clausen Cold Regions Research and Engineering Laboratory U.S. Army Engineer Research and Development Center 72 Lyme Road Hanover, NH

  4. Population Dynamics of Bulking and Foaming Bacteria in a Full-scale Wastewater Treatment Plant over Five Years.

    PubMed

    Jiang, Xiao-Tao; Guo, Feng; Zhang, Tong

    2016-04-11

    Bulking and foaming are two notorious problems in activated sludge wastewater treatment plants (WWTPs), which are mainly associated with the excessive growth of bulking and foaming bacteria (BFB). However, studies on affecting factors of BFB in full-scale WWTPs are still limited. In this study, data sets of high-throughput sequencing (HTS) of 16S V3-V4 amplicons of 58 monthly activated sludge samples from a municipal WWTP was re-analyzed to investigate the BFB dynamics and further to study the determinative factors. The population of BFB occupied 0.6~36% (averagely 8.5% ± 7.3%) of the total bacteria and showed seasonal variations with higher abundance in winter-spring than summer-autumn. Pair-wise correlation analysis and canonical correlation analysis (CCA) showed that Gordonia sp. was positively correlated with NO2-N and negatively correlated with NO3-N, and Nostocodia limicola II Tetraspharea sp. was negatively correlated with temperature and positively correlated with NH3-N in activated sludge. Bacteria species correlated with BFB could be clustered into two negatively related modules. Moreover, with intensive time series sampling, the dominant BFB could be accurately modeled with environmental interaction network, i.e. environmental parameters and biotic interactions between BFB and related bacteria, indicating that abiotic and biotic factors were both crucial to the dynamics of BFB.

  5. Simulated Watershed Mercury and Nitrate Flux Responses to Multiple Land Cover Conversion Scenarios

    EPA Science Inventory

    Water quality and toxic exposure science is transitioning towards analysis of multiple stressors rather than one particular environmental concern (e.g., mercury) or a group of similarly reacting chemicals (e.g., nutrients). However, two of the most important water quality constit...

  6. Preservice Music Teachers' Employment Preferences: Consideration Factors

    ERIC Educational Resources Information Center

    Robinson, Nicole R.

    2012-01-01

    This study was designed to investigate preservice music teachers' (N = 187) perceptions of employment preferences when considering future teaching positions. Adaptive Conjoint Analysis, a business market-based research tool, was used to determine preferences for personal factors (e.g., salary, commute), school environmental factors (e.g.,…

  7. 78 FR 7776 - Notice of Administrative Settlement Agreement for Recovery of Past Response Costs Pursuant to...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2013-02-04

    .... A copy of the Proposed Agreement may be obtained from Robin E. Eiseman (3RC41), Senior Assistant... Robin E. Eiseman at the above address. FOR FURTHER INFORMATION CONTACT: Robin E. Eiseman (3RC41), U.S. Environmental Protection Agency, 1650 Arch Street, Philadelphia, PA 19103, Phone: (215) 814-2612; eiseman.robin...

  8. 77 FR 49795 - Notice of Administrative Settlement Agreement for Recovery of Past Response Costs Pursuant to the...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2012-08-17

    ..., Philadelphia, PA 19103. A copy of the Proposed Agreement may be obtained from Jefferie E. Garcia (3RC42... should be forwarded to Jefferie E. Garcia at the above address. FOR FURTHER INFORMATION CONTACT: Jefferie E. Garcia (3RC42), U.S. Environmental Protection Agency, 1650 Arch Street, Philadelphia, PA 19103...

  9. Diagnosing environmental allergies: Comparison of skin-prick, intradermal, and serum specific immunoglobulin E testing

    PubMed Central

    Shtessel, Maria; Lobell, Elizabeth; Hudes, Golda; Rosenstreich, David; de Vos, Gabriele

    2017-01-01

    Background: Allergists commonly perform intradermal skin testing (IDST) after negative skin-prick testing (SPT) to comprehensively diagnose environmental allergic sensitization. However, with the availability of modern methods to detect serum-specific immunoglobulin E (ssIgE), it is unclear if ssIgE testing could substitute for IDST. Objective: To determine the efficacy of ssIgE testing and IDST when added to SPT in diagnosing environmental allergic sensitizations. Methods: SPT, IDST, and ssIgE testing to nine common environmental allergens were analyzed in 75 patients with oculonasal symptoms who presented to our allergy clinics in the Bronx, New York, between January 2014 and May 2015. Results: A total of 651 SPT and 499 ssIgE tests were independently performed and revealed 162 (25%) and 127 (25%) sensitizations, respectively. When SPT results were negative, IDST results revealed 108 of 452 additional sensitizations (24%). In contrast, when SPT results were negative, ssIgE test results only revealed 9% additional sensitizations. When both SPT and IDST results were negative, ssIgE testing only detected 3% of additional sensitizations, and ssIgE levels were typically low in these cases (median, 1.25 kU/L; range, 0.357–4.47 kU/L). When both SPT and ssIgE test results were negative, IDST results detected 15% additional sensitizations. Conclusion: IDST detected more additional environmental sensitizations compared with ssIgE testing. IDST, therefore, may be useful when the SPT and/or ssIgE testing results were negative, but the exposure history indicated relevant allergic sensitization. Serology added only a little more information if both SPT and IDST results were negative but may be useful in combination with SPT if IDST cannot be performed. PMID:28583228

  10. Diagnosing environmental allergies: Comparison of skin-prick, intradermal, and serum specific immunoglobulin E testing.

    PubMed

    Ferastraoaru, Denisa; Shtessel, Maria; Lobell, Elizabeth; Hudes, Golda; Rosenstreich, David; de Vos, Gabriele

    2017-06-01

    Allergists commonly perform intradermal skin testing (IDST) after negative skin-prick testing (SPT) to comprehensively diagnose environmental allergic sensitization. However, with the availability of modern methods to detect serum-specific immunoglobulin E (ssIgE), it is unclear if ssIgE testing could substitute for IDST. To determine the efficacy of ssIgE testing and IDST when added to SPT in diagnosing environmental allergic sensitizations. SPT, IDST, and ssIgE testing to nine common environmental allergens were analyzed in 75 patients with oculonasal symptoms who presented to our allergy clinics in the Bronx, New York, between January 2014 and May 2015. A total of 651 SPT and 499 ssIgE tests were independently performed and revealed 162 (25%) and 127 (25%) sensitizations, respectively. When SPT results were negative, IDST results revealed 108 of 452 additional sensitizations (24%). In contrast, when SPT results were negative, ssIgE test results only revealed 9% additional sensitizations. When both SPT and IDST results were negative, ssIgE testing only detected 3% of additional sensitizations, and ssIgE levels were typically low in these cases (median, 1.25 kU/L; range, 0.357-4.47 kU/L). When both SPT and ssIgE test results were negative, IDST results detected 15% additional sensitizations. IDST detected more additional environmental sensitizations compared with ssIgE testing. IDST, therefore, may be useful when the SPT and/or ssIgE testing results were negative, but the exposure history indicated relevant allergic sensitization. Serology added only a little more information if both SPT and IDST results were negative but may be useful in combination with SPT if IDST cannot be performed.

  11. Draft Environmental Impact Statement for Divert Activities and Exercises, Guam and Commonwealth of the Northern Mariana Islands

    DTIC Science & Technology

    2012-06-01

    information indicate that at least one designated use 22 (e.g., recreation, support of aquatic life and coral reef conservation, fishing and the consumption ...34 This EIS provides an analysis of environmental effects associated with the proposed action. The 35 following summarizes the formal NEPA process...alternatives and the No Action Alternative have been summarized in Table ES-2. A detailed analysis of 28 effects is provided in Chapter 4. 29 ES 7

  12. Mapping of recent brachiopod microstructure: a tool for environmental and climate studies

    NASA Astrophysics Data System (ADS)

    Ye, Facheng; Angiolini, Lucia; Crippa, Gaia; Garbelli, Claudio; Brand, Uwe; Cusack, Maggie; Harper, Elizabeth

    2017-04-01

    The shells of brachiopods are considered excellent archives of proxies for palaeoenvironment reconstructions. In fact, their biominerals when preserved in the fossil record have considerable potential for extending the climate and environmental record in the geological past. However, their use as fossil archives requires an understanding of how recent shells maintain or change their morphostructure and geochemistry in response to climate, environmental pressures or even ontogenetic/species-specific variation. Here, we focus on the morphology and size of the basic structural units (the fibres within the secondary layer) of several extant brachiopod taxa, to understand their growth program and ontogenetic variation, and if and how they are affected by different environmental conditions. Twenty-nine specimens of six recent brachiopod species [Notosaria nigricans (Sowerby, 1846), Liothyrella neozelanica (Thomson, 1918), Liothyrella uva (Broderip, 1833), Magasella sanguinea (Leach, 1814), Gryphus vitreus (Born, 1778), Calloria inconspicua (Sowerby, 1846)] were chosen for shell microstructural analysis using scanning electron microscopy. The morphology and size of each fibre in the shells of these specimens (600 fibres in ventral valves and 587 fibres in dorsal valves) were described using six parameters [Max and Min ferret (caliper diameter, i.e. longest/shortest distance between any two parallel tangents on the fibre), Area, Perimeter, Convex area and Convex perimeter]. Based on the statistical analysis of these data, we conclude that: 1) There is no significant difference in the shape and size of the fibres between ventral and dorsal valves of specimen's; 2) there is an ontogenetic trend in the shape and size of the fibres, as they invariably become wider and flatter with increasing age, that is from the external posterior part to the internal anterior part of each valve. This has important implications in comparative studies of fossil shells; 3) when comparing two species of the same genus living in different environmental conditions (e.g., Liothyrella uva and Liothyrella neozelanica), the fibres of Liothyrella uva are narrower and rounder than those of Liothyrella neozelanica, a difference that can be related to environmental differences of their habitats.

  13. Regional-scale drivers of marine nematode distribution in Southern Ocean continental shelf sediments

    NASA Astrophysics Data System (ADS)

    Hauquier, Freija; Verleyen, Elie; Tytgat, Bjorn; Vanreusel, Ann

    2018-07-01

    Many marine meiofauna taxa seem to possess cosmopolitan species distributions, despite their endobenthic lifestyle and restricted long-distance dispersal capacities. In light of this paradox we used a metacommunity framework to study spatial turnover in free-living nematode distribution and assess the importance of local environmental conditions in explaining differences between communities in surface and subsurface sediments of the Southern Ocean continental shelf. We analysed nematode community structure in two sediment layers (0-3 cm and 3-5 cm) of locations maximum 2400 km apart. We first focused on a subset of locations to evaluate whether the genus level is sufficiently taxonomically fine-grained to study large-scale patterns in nematode community structure. We subsequently used redundancy and variation partitioning analyses to quantify the unique and combined effects of local environmental conditions and spatial descriptors on genus-level community composition. Macroecological patterns in community structure were highly congruent at the genus and species level. Nematode community composition was highly divergent between both depth strata, likely as a result of local abiotic conditions. Variation in community structure between the different regions largely stemmed from turnover (i.e. genus/species replacement) rather than nestedness (i.e. genus/species loss). The level of turnover among communities increased with geographic distance and was more pronounced in subsurface layers compared to surface sediments. Variation partitioning analysis revealed that both environmental and spatial predictors significantly explained variation in community structure. Moreover, the shared fraction of both sets of variables was high, which suggested a substantial amount of spatially structured environmental variation. Additionally, the effect of space independent of environment was much higher than the effect of environment independent of space, which shows the importance of including spatial descriptors in meiofauna and nematode community ecology. Large-scale assessment of free-living nematode diversity and abundance in the Southern Ocean shelf zone revealed strong horizontal and vertical spatial structuring in response to local environmental conditions, in combination with (most likely) dispersal limitation.

  14. Energy Efficient Engine: Flight propulsion system final design and analysis

    NASA Technical Reports Server (NTRS)

    Davis, Donald Y.; Stearns, E. Marshall

    1985-01-01

    The Energy Efficient Engine (E3) is a NASA program to create fuel saving technology for future transport engines. The Flight Propulsion System (FPS) is the engine designed to achieve E3 goals. Achieving these goals required aerodynamic, mechanical and system technologies advanced beyond that of current production engines. These technologies were successfully demonstrated in component rigs, a core engine and a turbofan ground test engine. The design and benefits of the FPS are presented. All goals for efficiency, environmental considerations, and economic payoff were met. The FPS has, at maximum cruise, 10.67 km (35,000 ft), M0.8, standard day, a 16.9 percent lower installed specific fuel consumption than a CF6-50C. It provides an 8.6 percent reduction in direct operating cost for a short haul domestic transport and a 16.2 percent reduction for an international long distance transport.

  15. Assessing Air Pollutant-Induced, Health-Related External Costs in the Context of Nonmarginal System Changes: A Review.

    PubMed

    Bachmann, Till M

    2015-08-18

    Marginal analysis is the usual approach to environmental economic assessment, for instance, of health-related external costs due to energy-associated air pollutant emissions. However, nonlinearity exists in all steps of their assessment, i.e., atmospheric dispersion, impact assessment, and monetary valuation. Dedicated assessments thus appear necessary when evaluating large systems or their changes such as in green accounting or the implications of economy-wide energy transitions. Corresponding approaches are reviewed. Tools already exist that allow assessing a marginal change (e.g., one power plant's emissions) for different background emission scenarios that merely need to be defined and implemented. When assessing nonmarginal changes, the top-down approach is considered obsolete, and four variants of the bottom-up approach with different application domains were identified. Variants 1 and 2 use precalculated external cost factors with different levels of sophistication, suitable for energy systems modeling, optimizing for social (i.e., private and external) costs. Providing more reliable results due to more detailed modeling, emission sources are assessed individually or jointly in variants 3 and 4, respectively. Aiming at considering nonlinearity more fully and simultaneously following marginal analysis principles, I propose a variant 3-based approach, subdividing an aggregate (i.e., a nonmarginal change) into several smaller changes. Its strengths and drawbacks, notably the associated effort, are discussed.

  16. Life cycle assessment of different sea cucumber ( Apostichopus japonicus Selenka) farming systems

    NASA Astrophysics Data System (ADS)

    Wang, Guodong; Dong, Shuanglin; Tian, Xiangli; Gao, Qinfeng; Wang, Fang; Xu, Kefeng

    2015-12-01

    The life cycle assessment was employed to evaluate the environmental impacts of three farming systems (indoor intensive, semi-intensive and extensive systems) of sea cucumber living near Qingdao, China, which can effectively overcome the interference of inaccurate background parameters caused by the diversity of economic level and environment in different regions. Six indicators entailing global warming potential (1.86E + 04, 3.45E + 03, 2.36E + 02), eutrophication potential (6.65E + 01, -1.24E + 02, -1.65E + 02), acidification potential (1.93E + 02, 4.33E + 01, 1.30E + 00), photochemical oxidant formation potential (2.35E-01, 5.46E -02, 2.53E-03), human toxicity potential (2.47E + 00, 6.08E-01, 4.91E + 00) and energy use (3.36E + 05, 1.27E + 04, 1.48E + 03) were introduced in the current study. It was found that all environmental indicators in the indoor intensive farming system were much higher than those in semi-intensive and extensive farming systems because of the dominant role of energy input, while energy input also contributed as the leading cause factor for most of the indicators in the semi-intensive farming system. Yet in the extensive farming system, infrastructure materials played a major role. Through a comprehensive comparison of the three farming systems, it was concluded that income per unit area of indoor intensive farming system was much higher than those of semi-intensive and extensive farming systems. However, the extensive farming system was the most sustainable one. Moreover, adequate measures were proposed, respectively, to improve the environmental sustainability of each farming system in the present study.

  17. Sex Differences in Genetic and Environmental Influences on Longitudinal Change in Functional Ability in Late Adulthood.

    PubMed

    Finkel, Deborah; Ernsth-Bravell, Marie; Pedersen, Nancy L

    2015-09-01

    To determine the extent to which genetic and environmental factors contribute to individual and gender differences in aging of functional ability. Twenty assessments of functional ability are collected as part of the longitudinal Swedish Adoption/Twin Study of Aging from 859 twins aged 50-88 at the first wave. Participants completed up to 6 assessments covering a 19-year period. Factor analysis was used to create 3 factors: flexibility, fine motor skills, and balance. Latent growth curve analysis demonstrated increasing disability and variability after age 70. For flexibility, results indicated significant sex differences in mean change trajectories but no sex differences in components of variance. No sex differences were found for fine motor movement. For balance, there were no sex differences in mean change trajectories; however, there was significant genetic variance for changes in balance in women after age 70 but not for men. Although idiosyncratic environmental influences account for a large part of increasing variance, correlated and shared rearing environmental effects were also evident. Thus, both microenvironmental (individual) and macroenvironmental (family and cultural) effects, as well as genetic factors, affect maintenance of functional ability in late adulthood. © The Author 2014. Published by Oxford University Press on behalf of The Gerontological Society of America. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

  18. Integrating Phenological, Trait and Environmental Data For Continental Scale Analysis: A Community Approach

    NASA Astrophysics Data System (ADS)

    Weltzin, J. F.; Walls, R.; Guralnick, R. P.; Rosemartin, A.; Deck, J.; Powers, L. A.

    2014-12-01

    There is a wealth of biodiversity and environmental data that can provide the basis for addressing global scale questions of societal concern. However, our ability to discover, access and integrate these data for use in broader analyses is hampered by the lack of standardized languages and systems. New tools (e.g. ontologies, data standards, integration tools, unique identifiers) are being developed that enable establishment of a framework for linked and open data. Relative to other domains, these tools are nascent in biodiversity and environmental sciences and will require effort to develop, though work can capitalize on lessons learned from previous efforts. Here we discuss needed next steps to provide consistently described and formatted ecological data for immediate application in ecological analysis, focusing on integrating phenology, trait and environmental data to understand local to continental-scale biophysical processes and inform natural resource management practices. As more sources of data become available at finer spatial and temporal resolution, e.g., from national standardized earth observing systems (e.g., NEON, LTER and LTAR Networks, USA NPN), these challenges will become more acute. Here we provide an overview of the standards and ontology development landscape specifically related to phenological and trait data, and identify requirements to overcome current challenges. Second, we outline a workflow for formatting and integrating existing datasets to address key scientific and resource management questions such as: "What traits determine differential phenological responses to changing environmental conditions?" or "What is the role of granularity of observation, and of spatiotemporal scale, in controlling phenological responses to different driving variables?" Third, we discuss methods to semantically annotate datasets to greatly decrease time needed to assemble heterogeneous data for use in ecological analyses on varying spatial scales. We close by making a call to interested community members for a working group to model phenology, trait and environmental data products from continental-scale efforts (e.g. NEON, USA-NPN and others) focusing on ways to assure discoverability and interoperability.

  19. Environmental management strategy: four forces analysis.

    PubMed

    Doyle, Martin W; Von Windheim, Jesko

    2015-01-01

    We develop an analytical approach for more systematically analyzing environmental management problems in order to develop strategic plans. This approach can be deployed by agencies, non-profit organizations, corporations, or other organizations and institutions tasked with improving environmental quality. The analysis relies on assessing the underlying natural processes followed by articulation of the relevant societal forces causing environmental change: (1) science and technology, (2) governance, (3) markets and the economy, and (4) public behavior. The four forces analysis is then used to strategize which types of actions might be most effective at influencing environmental quality. Such strategy has been under-used and under-valued in environmental management outside of the corporate sector, and we suggest that this four forces analysis is a useful analytic to begin developing such strategy.

  20. Environmental Management Strategy: Four Forces Analysis

    NASA Astrophysics Data System (ADS)

    Doyle, Martin W.; Von Windheim, Jesko

    2015-01-01

    We develop an analytical approach for more systematically analyzing environmental management problems in order to develop strategic plans. This approach can be deployed by agencies, non-profit organizations, corporations, or other organizations and institutions tasked with improving environmental quality. The analysis relies on assessing the underlying natural processes followed by articulation of the relevant societal forces causing environmental change: (1) science and technology, (2) governance, (3) markets and the economy, and (4) public behavior. The four forces analysis is then used to strategize which types of actions might be most effective at influencing environmental quality. Such strategy has been under-used and under-valued in environmental management outside of the corporate sector, and we suggest that this four forces analysis is a useful analytic to begin developing such strategy.

  1. Chlorination pattern effect on thermodynamic parameters and environmental degradability for C₁₀-SCCPs: Quantum chemical calculation based on virtual combinational library.

    PubMed

    Sun, Yuzhen; Pan, Wenxiao; Lin, Yuan; Fu, Jianjie; Zhang, Aiqian

    2016-01-01

    Short-chain chlorinated paraffins (SCCPs) are still controversial candidates for inclusion in the Stockholm Convention. The inherent mixture nature of SCCPs makes it rather difficult to explore their environmental behaviors. A virtual molecule library of 42,720 C10-SCCP congeners covering the full structure spectrum was constructed. We explored the structural effects on the thermodynamic parameters and environmental degradability of C10-SCCPs through semi-empirical quantum chemical calculations. The thermodynamic properties were acquired using the AM1 method, and frontier molecular orbital analysis was carried out to obtain the E(HOMO), E(LUMO) and E(LUMO)-E(HOMO) for degradability exploration at the same level. The influence of the chlorination degree (N(Cl)) on the relative stability and environmental degradation was elucidated. A novel structural descriptor, μ, was proposed to measure the dispersion of the chlorine atoms within a molecule. There were significant correlations between thermodynamic values and N(Cl), while the reported N(Cl)-dependent pollution profile of C10-SCCPs in environmental samples was basically consistent with the predicted order of formation stability of C10-SCCP congeners. In addition, isomers with large μ showed higher relative stability than those with small μ. This could be further verified by the relationship between μ and the reactivity of nucleophilic substitution and OH attack respectively. The C10-SCCP congeners with less Cl substitution and lower dispersion degree are susceptible to environmental degradation via nucleophilic substitution and hydroxyl radical attack, while direct photolysis of C10-SCCP congeners cannot readily occur due to the large E(LUMO)-E(HOMO) values. The chlorination effect and the conclusions were further checked with appropriate density functional theory (DFT) calculations. Copyright © 2015. Published by Elsevier B.V.

  2. Factors influencing detection of eDNA from a stream-dwelling amphibian

    USGS Publications Warehouse

    Pilliod, David S.; Goldberg, Caren S.; Arkle, Robert S.; Waits, Lisette P.

    2013-01-01

    Environmental DNA (eDNA) methods for detecting and estimating abundance of aquatic species are emerging rapidly, but little is known about how processes such as secretion rate, environmental degradation, and time since colonization or extirpation from a given site affect eDNA measurements. Using stream-dwelling salamanders and quantitative PCR (qPCR) analysis, we conducted three experiments to assess eDNA: (i) production rate; (ii) persistence time under different temperature and light conditions; and (iii) detectability and concentration through time following experimental introduction and removal of salamanders into previously unoccupied streams. We found that 44–50 g individuals held in aquaria produced 77 ng eDNA/h for 2 h, after which production either slowed considerably or began to equilibrate with degradation. eDNA in both full-sun and shaded treatments degraded exponentially to 2) and when samples were collected within 5 m of the animals. Concentrations of eDNA detected were very low and increased steadily from 6–24 h after introduction, reaching 0.0022 ng/L. Within 1 h of removing salamanders from the stream, eDNA was no longer detectable. These results suggest that eDNA detectability and concentration depend on production rates of individuals, environmental conditions, density of animals, and their residence time.

  3. Using occupancy modelling to compare environmental DNA to traditional field methods for regional-scale monitoring of an endangered aquatic species.

    PubMed

    Schmelzle, Molly C; Kinziger, Andrew P

    2016-07-01

    Environmental DNA (eDNA) monitoring approaches promise to greatly improve detection of rare, endangered and invasive species in comparison with traditional field approaches. Herein, eDNA approaches and traditional seining methods were applied at 29 research locations to compare method-specific estimates of detection and occupancy probabilities for endangered tidewater goby (Eucyclogobius newberryi). At each location, multiple paired seine hauls and water samples for eDNA analysis were taken, ranging from two to 23 samples per site, depending upon habitat size. Analysis using a multimethod occupancy modelling framework indicated that the probability of detection using eDNA was nearly double (0.74) the rate of detection for seining (0.39). The higher detection rates afforded by eDNA allowed determination of tidewater goby occupancy at two locations where they have not been previously detected and at one location considered to be locally extirpated. Additionally, eDNA concentration was positively related to tidewater goby catch per unit effort, suggesting eDNA could potentially be used as a proxy for local tidewater goby abundance. Compared to traditional field sampling, eDNA provided improved occupancy parameter estimates and can be applied to increase management efficiency across a broad spatial range and within a diversity of habitats. © 2015 John Wiley & Sons Ltd.

  4. Performance, cost and environmental assessment of gasification-based electricity in India: A preliminary analysis

    NASA Astrophysics Data System (ADS)

    Rani, Abha; Singh, Udayan; Jayant; Singh, Ajay K.; Sankar Mahapatra, Siba

    2017-07-01

    Coal gasification processes are crucial to decarbonisation in the power sector. While underground coal gasification (UCG) and integrated gasification combined cycle (IGCC) are different in terms of the site of gasification, they have considerable similarities in terms of the types of gasifiers used. Of course, UCG offers some additional advantages such as reduction of the fugitive methane emissions accompanying the coal mining process. Nevertheless, simulation of IGCC plants involving surface coal gasification is likely to give reasonable indication of the 3E (efficiency, economics and emissions) prospects of the gasification pathway towards electricity. This paper will aim at Estimating 3E impacts (efficiency, environment, economics) of gasification processes using simulation carried out in the Integrated Environmental Control Model (IECM) software framework. Key plant level controls which will be studied in this paper will be based on Indian financial regulations and operating costs which are specific to the country. Also, impacts of CO2 capture and storage (CCS) in these plants will be studied. The various parameters that can be studied are plant load factor, impact of coal quality and price, type of CO2 capture process, capital costs etc. It is hoped that relevant insights into electricity generation from gasification may be obtained with this paper.

  5. Effects of Place Identity, Place Dependence, and Experience-Use History on Perceptions of Recreation Impacts in a Natural Setting

    NASA Astrophysics Data System (ADS)

    White, Dave D.; Virden, Randy J.; van Riper, Carena J.

    2008-10-01

    It is generally accepted that recreation use in natural environments results in some degree of negative social and environmental impact. Environmental managers are tasked with mitigating the impact while providing beneficial recreation opportunities. Research on the factors that influence visitors’ perceptions of environmental and social conditions is necessary to inform sound environmental management of protected natural areas. This study examines the effect of prior experience with the setting and two dimensions of place attachment (i.e., place identity and place dependence) on visitors’ perceptions of three types of recreation impacts (i.e., depreciative behavior, environmental impacts, and recreation conflict). Principal components analysis, confirmatory factor analysis, and structural equation modeling were used to test the study hypotheses using data collected from 351 visitors through on-site questionnaires (response rate of 93 percent). The results show that prior experience exhibited a moderate and significant direct positive effect on place identity, place dependence, and visitors’ perceptions of recreation impacts. Contrary to study hypotheses and prior research, neither place dependence nor place identity exhibited a significant effect on the dependent variables. The results show that prior experience causes visitors to be more sensitive to depreciative behaviors, environmental impacts, and recreation conflict. These findings raise concerns over potential visitor displacement and deterioration of site conditions. Implications for resource managers are discussed, which include education, modifying visitor use patterns, and site design strategies.

  6. Effects of place identity, place dependence, and experience-use history on perceptions of recreation impacts in a natural setting.

    PubMed

    White, Dave D; Virden, Randy J; van Riper, Carena J

    2008-10-01

    It is generally accepted that recreation use in natural environments results in some degree of negative social and environmental impact. Environmental managers are tasked with mitigating the impact while providing beneficial recreation opportunities. Research on the factors that influence visitors' perceptions of environmental and social conditions is necessary to inform sound environmental management of protected natural areas. This study examines the effect of prior experience with the setting and two dimensions of place attachment (i.e., place identity and place dependence) on visitors' perceptions of three types of recreation impacts (i.e., depreciative behavior, environmental impacts, and recreation conflict). Principal components analysis, confirmatory factor analysis, and structural equation modeling were used to test the study hypotheses using data collected from 351 visitors through on-site questionnaires (response rate of 93 percent). The results show that prior experience exhibited a moderate and significant direct positive effect on place identity, place dependence, and visitors' perceptions of recreation impacts. Contrary to study hypotheses and prior research, neither place dependence nor place identity exhibited a significant effect on the dependent variables. The results show that prior experience causes visitors to be more sensitive to depreciative behaviors, environmental impacts, and recreation conflict. These findings raise concerns over potential visitor displacement and deterioration of site conditions. Implications for resource managers are discussed, which include education, modifying visitor use patterns, and site design strategies.

  7. Elevated Serum Polybrominated Diphenyl Ethers and Alteration of Thyroid Hormones in Children from Guiyu, China

    PubMed Central

    Xu, Xijin; Liu, Junxiao; Zeng, Xiang; Lu, Fangfang; Chen, Aimin; Huo, Xia

    2014-01-01

    Informal electronic waste (e-waste) recycling results in serious environmental pollution of polybrominated diphenyl ethers (PBDEs) and heavy metals. This study explored whether there is an association between PBDEs, heavy metal and key growth- and development-related hormones in children from Guiyu, an e-waste area in southern China. We quantified eight PBDE congeners using gas chromatographic mass spectrometry, lead and cadmium utilizing graphite furnace atomic absorption spectrometry, three thyroids with radioimmunoassay and two types of growth hormones by an enzyme-linked immune-sorbent assay (ELISA) in 162 children, 4 to 6 years old, from Guiyu. In blood, median total PBDE was 189.99 ng/g lipid. Lead and cadmium concentrations in blood averaged 14.53±4.85 µg dL−1 and 0.77±0.35 µg L−1, respectively. Spearman partial correlation analysis illustrated that lead was positively correlated with BDE153 and BDE183. Thyroid-stimulating hormone (TSH) was positively correlated with almost all PBDE congeners and negatively correlated with insulin-like growth factor binding protein-3 (IGFBP-3), whereas free triiodothyronine (FT3) and free thyroxine (FT4) were negatively correlated with BDE154. However, no correlation between the hormones and blood lead or cadmium levels was found in this study. Adjusted multiple linear regression analysis showed that total PBDEs was negatively associated with FT3 and positively associated with TSH. Notably, FT4 was positively correlated with FT3, house functions as a workshop, and father's work involved in e-waste recycling and negatively correlated with vitamin consumptions. TSH was negatively related with FT4, paternal residence time in Guiyu, working hours of mother, and child bean products intake. IGFBP-3 was positively correlated with IGF-1 and house close to an e-waste dump. These results suggest that elevated PBDEs and heavy metals related to e-waste in Guiyu may be important risk factors for hormone alterations in children. PMID:25415336

  8. The moderation by the serotonin transporter gene of environmental adversity in the aetiology of mental illness: review and methodological analysis.

    PubMed

    Uher, R; McGuffin, P

    2008-02-01

    Gene-environmental interaction (G x E) between a common functional polymorphism in the promoter region of the serotonin transporter gene (5-HTT) and environmental adversity on the onset of depression in humans has been found in fifteen independent studies. It is supported by evidence from animal experiments, pharmacological challenge and neuroimaging investigations. However, negative findings have been reported in two large samples. We explore reasons for the inconsistencies and suggest means to their resolution. Sample age and gender composition emerge as important factors. While the G x E has been consistently detected in young adult samples, there are contradictory findings in adolescent boys and elderly people. The method of assessment of environmental adversity is also important with detailed interview-based approaches being associated with positive G x E findings. Unresolved issues in the definition of the genotype include the dominance of alleles and influence of other polymorphisms, both in 5-HTT and other genes. Assessment of multiple adverse outcomes, including depression, substance use and self-destructive behaviour is needed to clarify the generalisability of the G x E pathogenic mechanisms. Biological and behavioural intermediate phenotypes are yet to be exploited to understand the mechanisms underlying the G x E.

  9. Environmental Health and Safety Hazards Experienced by Home Health Care Providers: A Room-by-Room Analysis.

    PubMed

    Polivka, Barbara J; Wills, Celia E; Darragh, Amy; Lavender, Steven; Sommerich, Carolyn; Stredney, Donald

    2015-11-01

    The number of personnel providing in-home health care services is increasing substantially. The unique configuration of environmental hazards in individual client homes has a significant impact on the safety and health of home health care providers (HHPs). This mixed-methods study used data from a standardized questionnaire, focus groups, and individual interviews to explore environmental health and safety hazards encountered by HHPs in client homes. The participant sample (N = 68) included nurses, aides, therapists, and owners/managers from a variety of geographic locations. The most often-reported hazards were trip/slip/lift hazards, biohazards, and hazards from poor air quality, allergens, pests and rodents, and fire and burns. Frequency of identified key hazards varied by room, that is, kitchen (e.g., throw rugs, water on floor), bathroom (e.g., tight spaces for client handling), bedroom (e.g., bed too low), living room (e.g., animal waste), and hallway (e.g., clutter). Findings indicate the need for broader training to enable HHPs to identify and address hazards they encounter in client homes. © 2015 The Author(s).

  10. Barriers Influencing Linkage to Hypertension Care in Kenya: Qualitative Analysis from the LARK Hypertension Study.

    PubMed

    Naanyu, Violet; Vedanthan, Rajesh; Kamano, Jemima H; Rotich, Jackson K; Lagat, Kennedy K; Kiptoo, Peninah; Kofler, Claire; Mutai, Kennedy K; Bloomfield, Gerald S; Menya, Diana; Kimaiyo, Sylvester; Fuster, Valentin; Horowitz, Carol R; Inui, Thomas S

    2016-03-01

    Hypertension, the leading global risk factor for mortality, is characterized by low treatment and control rates in low- and middle-income countries. Poor linkage to hypertension care contributes to poor outcomes for patients. However, specific factors influencing linkage to hypertension care are not well known. To evaluate factors influencing linkage to hypertension care in rural western Kenya. Qualitative research study using a modified Health Belief Model that incorporates the impact of emotional and environmental factors on behavior. Mabaraza (traditional community assembly) participants (n = 242) responded to an open invitation to residents in their respective communities. Focus groups, formed by purposive sampling, consisted of hypertensive individuals, at-large community members, and community health workers (n = 169). We performed content analysis of the transcripts with NVivo 10 software, using both deductive and inductive codes. We used a two-round Delphi method to rank the barriers identified in the content analysis. We selected factors using triangulation of frequency of codes and themes from the transcripts, in addition to the results of the Delphi exercise. Sociodemographic characteristics of participants were summarized using descriptive statistics. We identified 27 barriers to linkage to hypertension care, grouped into individual (cognitive and emotional) and environmental factors. Cognitive factors included the asymptomatic nature of hypertension and limited information. Emotional factors included fear of being a burden to the family and fear of being screened for stigmatized diseases such as HIV. Environmental factors were divided into physical (e.g. distance), socioeconomic (e.g. poverty), and health system factors (e.g. popularity of alternative therapies). The Delphi results were generally consistent with the findings from the content analysis. Individual and environmental factors are barriers to linkage to hypertension care in rural western Kenya. Our analysis provides new insights and methodological approaches that may be relevant to other low-resource settings worldwide.

  11. Advanced Computational Framework for Environmental Management ZEM, Version 1.x

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Vesselinov, Velimir V.; O'Malley, Daniel; Pandey, Sachin

    2016-11-04

    Typically environmental management problems require analysis of large and complex data sets originating from concurrent data streams with different data collection frequencies and pedigree. These big data sets require on-the-fly integration into a series of models with different complexity for various types of model analyses where the data are applied as soft and hard model constraints. This is needed to provide fast iterative model analyses based on the latest available data to guide decision-making. Furthermore, the data and model are associated with uncertainties. The uncertainties are probabilistic (e.g. measurement errors) and non-probabilistic (unknowns, e.g. alternative conceptual models characterizing site conditions).more » To address all of these issues, we have developed an integrated framework for real-time data and model analyses for environmental decision-making called ZEM. The framework allows for seamless and on-the-fly integration of data and modeling results for robust and scientifically-defensible decision-making applying advanced decision analyses tools such as Bayesian- Information-Gap Decision Theory (BIG-DT). The framework also includes advanced methods for optimization that are capable of dealing with a large number of unknown model parameters, and surrogate (reduced order) modeling capabilities based on support vector regression techniques. The framework is coded in Julia, a state-of-the-art high-performance programing language (http://julialang.org). The ZEM framework is open-source and can be applied to any environmental management site. The framework will be open-source and released under GPL V3 license.« less

  12. Hepatitis E Virus Genotype 3 in Sewage and Genotype 1 in Acute Hepatitis Cases, Israel

    PubMed Central

    Ram, Daniela; Manor, Yossi; Gozlan, Yael; Schwartz, Eli; Ben-Ari, Ziv; Mendelson, Ella; Mor, Orna

    2016-01-01

    Hepatitis E virus (HEV) is an emerging infectious agent in developed countries. HEV genotypes 1 (G1) and 3 (G3) have been identified in environmental and clinical samples in Europe. In Israel, the overall prevalence of anti-HEV IgG antibodies was found to be 10.6%; however, reports of HEV infection are scarce. In this study, the presence of HEV in Israel was investigated using 169 sewage samples from 32 treatment facilities and 49 samples from acute hepatitis patients, all collected between 2013 and 2015. Fourteen sewage samples, from Haifa (11/18 samples), Tel Aviv (2/29 samples), and Beer Sheva (1/17 samples), regions with good sanitary conditions and middle-high socioeconomic populations, were HEV positive. Among the patient samples, 6.1% (3/49) were HEV positive, all returning travelers from India. Genotype analysis revealed G1 HEV in patients and G3 HEV sequences in sewage. Evidence that HEV could be establishing itself in our region may justify more active surveillance to monitor its spread. PMID:27246446

  13. A Biophysical Modeling Framework for Assessing the Environmental Impact of Biofuel Production

    NASA Astrophysics Data System (ADS)

    Zhang, X.; Izaurradle, C.; Manowitz, D.; West, T. O.; Post, W. M.; Thomson, A. M.; Nichols, J.; Bandaru, V.; Williams, J. R.

    2009-12-01

    Long-term sustainability of a biofuel economy necessitates environmentally friendly biofuel production systems. We describe a biophysical modeling framework developed to understand and quantify the environmental value and impact (e.g. water balance, nutrients balance, carbon balance, and soil quality) of different biomass cropping systems. This modeling framework consists of three major components: 1) a Geographic Information System (GIS) based data processing system, 2) a spatially-explicit biophysical modeling approach, and 3) a user friendly information distribution system. First, we developed a GIS to manage the large amount of geospatial data (e.g. climate, land use, soil, and hydrograhy) and extract input information for the biophysical model. Second, the Environmental Policy Integrated Climate (EPIC) biophysical model is used to predict the impact of various cropping systems and management intensities on productivity, water balance, and biogeochemical variables. Finally, a geo-database is developed to distribute the results of ecosystem service variables (e.g. net primary productivity, soil carbon balance, soil erosion, nitrogen and phosphorus losses, and N2O fluxes) simulated by EPIC for each spatial modeling unit online using PostgreSQL. We applied this framework in a Regional Intensive Management Area (RIMA) of 9 counties in Michigan. A total of 4,833 spatial units with relatively homogeneous biophysical properties were derived using SSURGO, Crop Data Layer, County, and 10-digit watershed boundaries. For each unit, EPIC was executed from 1980 to 2003 under 54 cropping scenarios (eg. corn, switchgrass, and hybrid poplar). The simulation results were compared with historical crop yields from USDA NASS. Spatial mapping of the results show high variability among different cropping scenarios in terms of the simulated ecosystem services variables. Overall, the framework developed in this study enables the incorporation of environmental factors into economic and life-cycle analysis in order to optimize biomass cropping production scenarios.

  14. Socioeconomic factors and home allergen exposure in children with asthma.

    PubMed

    Ungar, Wendy J; Cope, Shannon F; Kozyrskyj, Anita; Paterson, J Michael

    2010-01-01

    The objective of this study was to determine the association between sociodemographic factors and the elimination of allergen sources from homes of asthmatic children. In a cross-sectional analysis of data from 845 asthmatic children, multiple linear regression investigated the association between socioeconomic factors and failure to reduce allergen sources (i.e., stuffed toys, pets, carpeting, curtains, and cushions); failure to use linen covers; and not laundering linens weekly in hot water. Logistic regression assessed the relationship between socioeconomic status and exposure to environmental tobacco smoke. Mother's employment status was significantly associated with the quality of the home environment (P = .0002). Homemakers demonstrated fewer poor practices (3.1) compared with full-time or part-time employed mothers (3.6). Children whose mothers reported no post-secondary education were more likely to have environmental tobacco smoke exposure compared with those who had a post-secondary CE education or higher (OR 2.4, 95% CI 1.7, 3.5). Children whose mothers worked at home and were better educated were at reduced risk for exposure to sources of indoor allergens.

  15. Global Transcriptomic Effects of Environmentally Relevant Concentrations of the Neonicotinoids Clothianidin, Imidacloprid, and Thiamethoxam in the Brain of Honey Bees ( Apis mellifera).

    PubMed

    Christen, Verena; Schirrmann, Melanie; Frey, Juerg E; Fent, Karl

    2018-06-14

    Neonicotinoids are implicated in the decline of honey bees, but the molecular basis underlying adverse effects is poorly known. Here we describe global transcriptomic profiles in the brain of honey bee workers exposed for 48 h at one environmentally realistic and one sublethal concentration of 0.3 and 3.0 ng/bee clothianidin and imidacloprid, respectively, and 0.1 and 1.0 ng/bee thiamethoxam (1-30 ng/mL sucrose solution) by high-throughput RNA-sequencing (RNA-seq). All neonicotinoids led to significant alteration (mainly down-regulation) of gene expression, generally with a concentration-dependent effect. Among many others, genes related to metabolism and detoxification were differently expressed. Gene ontology (GO) enrichment analysis of biological processes revealed catabolic carbohydrate metabolism (regulation of enzyme activities such as amylase), lipid metabolism, and transport mechanisms as shared terms between all neonicotinoids at high concentrations. KEGG pathway analysis indicated that at least two neonicotinoids induced changes in expression of various metabolic pathways: pentose phosphate pathways, starch and sucrose metabolism, and sulfur metabolism, in which glucose 1-dehydrogenase and alpha-amylase were down-regulated and 3'(2'), 5'-bisphosphate nucleotidase was up-regulated. RT-qPCR analysis confirmed the down-regulation of major royal jelly proteins, hbg3, and cyp9e2 found by RNA-seq. Our study highlights the comparative molecular effects of neonicotinoid exposure to bees. Further studies should link these effects with physiological outcomes for a better understanding of effects of neonicotinoids.

  16. Diel metabolomics analysis of a hot spring chlorophototrophic microbial mat leads to new hypotheses of community member metabolisms

    DOE PAGES

    Kim, Young-Mo; Nowack, Shane; Olsen, Millie; ...

    2015-04-17

    Dynamic environmental factors such as light, nutrients, salt, and temperature continuously affect chlorophototrophic microbial mats, requiring adaptative and acclimative responses to stabilize composition and function. Quantitative metabolomics analysis can provide insights into metabolite dynamics for understanding community response to such changing environmental conditions. In this study, we quantified volatile organic acids, polar metabolites (amino acids, glycolytic and citric acid cycle intermediates, nucleobases, nucleosides, and sugars), wax esters, and polyhydroxyalkanoates, resulting in the identification of 104 metabolites and related molecules in thermal chlorophototrophic microbial mat cores collected over a diel cycle in Mushroom Spring, Yellowstone National Park. A limited number ofmore » predominant taxa inhabiting this community and their functional potentials have been previously identified through metagenomic and metatranscriptomic analyses and in situ metabolisms and metabolic interactions among these taxa have been hypothesized. Our metabolomics results confirmed the diel cycling of photorespiration (e.g. glycolate) and fermentation (e.g. acetate, propionate, and lactate) products, the carbon storage polymers polyhydroxyalkanoates, and dissolved gases (e.g. H2 and CO2) in the waters overlying the mat, which were hypothesized to occur in major mat chlorophototrophic community members. In addition, we have formulated the following new hypotheses: 1) the morning hours are a time of biosynthesis of amino acids, DNA, and RNA; 2) Synechococcus spp. produce CH4 via metabolism of phosphonates, and photo-inhibited cells may also produce lactate via fermentation as an alternate metabolism; 3) glycolate and lactate are exchanged among Synechococcus and Roseiflexus spp.; and 4) fluctuations in many metabolite pools (e.g. wax esters) at different times of day result from species found at different depths within the mat responding to temporal differences in their niches.« less

  17. Diel metabolomics analysis of a hot spring chlorophototrophic microbial mat leads to new hypotheses of community member metabolisms

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Kim, Young-Mo; Nowack, Shane; Olsen, Millie

    Dynamic environmental factors such as light, nutrients, salt, and temperature continuously affect chlorophototrophic microbial mats, requiring adaptative and acclimative responses to stabilize composition and function. Quantitative metabolomics analysis can provide insights into metabolite dynamics for understanding community response to such changing environmental conditions. In this study, we quantified volatile organic acids, polar metabolites (amino acids, glycolytic and citric acid cycle intermediates, nucleobases, nucleosides, and sugars), wax esters, and polyhydroxyalkanoates, resulting in the identification of 104 metabolites and related molecules in thermal chlorophototrophic microbial mat cores collected over a diel cycle in Mushroom Spring, Yellowstone National Park. A limited number ofmore » predominant taxa inhabiting this community and their functional potentials have been previously identified through metagenomic and metatranscriptomic analyses and in situ metabolisms and metabolic interactions among these taxa have been hypothesized. Our metabolomics results confirmed the diel cycling of photorespiration (e.g. glycolate) and fermentation (e.g. acetate, propionate, and lactate) products, the carbon storage polymers polyhydroxyalkanoates, and dissolved gases (e.g. H2 and CO2) in the waters overlying the mat, which were hypothesized to occur in major mat chlorophototrophic community members. In addition, we have formulated the following new hypotheses: 1) the morning hours are a time of biosynthesis of amino acids, DNA, and RNA; 2) Synechococcus spp. produce CH4 via metabolism of phosphonates, and photo-inhibited cells may also produce lactate via fermentation as an alternate metabolism; 3) glycolate and lactate are exchanged among Synechococcus and Roseiflexus spp.; and 4) fluctuations in many metabolite pools (e.g. wax esters) at different times of day result from species found at different depths within the mat responding to temporal differences in their niches.« less

  18. Diel metabolomics analysis of a hot spring chlorophototrophic microbial mat leads to new hypotheses of community member metabolisms

    PubMed Central

    Kim, Young-Mo; Nowack, Shane; Olsen, Millie T.; Becraft, Eric D.; Wood, Jason M.; Thiel, Vera; Klapper, Isaac; Kühl, Michael; Fredrickson, James K.; Bryant, Donald A.; Ward, David M.; Metz, Thomas O.

    2015-01-01

    Dynamic environmental factors such as light, nutrients, salt, and temperature continuously affect chlorophototrophic microbial mats, requiring adaptive and acclimative responses to stabilize composition and function. Quantitative metabolomics analysis can provide insights into metabolite dynamics for understanding community response to such changing environmental conditions. In this study, we quantified volatile organic acids, polar metabolites (amino acids, glycolytic and citric acid cycle intermediates, nucleobases, nucleosides, and sugars), wax esters, and polyhydroxyalkanoates, resulting in the identification of 104 metabolites and related molecules in thermal chlorophototrophic microbial mat cores collected over a diel cycle in Mushroom Spring, Yellowstone National Park. A limited number of predominant taxa inhabit this community and their functional potentials have been previously identified through metagenomic and metatranscriptomic analyses and in situ metabolisms, and metabolic interactions among these taxa have been hypothesized. Our metabolomics results confirmed the diel cycling of photorespiration (e.g., glycolate) and fermentation (e.g., acetate, propionate, and lactate) products, the carbon storage polymers polyhydroxyalkanoates, and dissolved gasses (e.g., H2 and CO2) in the waters overlying the mat, which were hypothesized to occur in major mat chlorophototrophic community members. In addition, we have formulated the following new hypotheses: (1) the morning hours are a time of biosynthesis of amino acids, DNA, and RNA; (2) photo-inhibited cells may also produce lactate via fermentation as an alternate metabolism; (3) glycolate and lactate are exchanged among Synechococcus and Roseiflexus spp.; and (4) fluctuations in many metabolite pools (e.g., wax esters) at different times of day result from species found at different depths within the mat responding to temporal differences in their niches. PMID:25941514

  19. NASA's Agency-Wide Strategy for Environmental Regulatory Risk Analysis and Communication

    NASA Technical Reports Server (NTRS)

    Scroggins, Sharon; Duda, Kristen

    2008-01-01

    This viewgraph presentation gives an overview of NASA's risk analysis communication programs associated with changing environmental policies. The topics include: 1) NASA Program Transition; 2) Principal Center for Regulatory Risk Analysis and Communication (RRAC PC); and 3) Regulatory Tracking and Communication Process.

  20. How to limit false positives in environmental DNA and metabarcoding?

    PubMed

    Ficetola, Gentile Francesco; Taberlet, Pierre; Coissac, Eric

    2016-05-01

    Environmental DNA (eDNA) and metabarcoding are boosting our ability to acquire data on species distribution in a variety of ecosystems. Nevertheless, as most of sampling approaches, eDNA is not perfect. It can fail to detect species that are actually present, and even false positives are possible: a species may be apparently detected in areas where it is actually absent. Controlling false positives remains a main challenge for eDNA analyses: in this issue of Molecular Ecology Resources, Lahoz-Monfort et al. () test the performance of multiple statistical modelling approaches to estimate the rate of detection and false positives from eDNA data. Here, we discuss the importance of controlling for false detection from early steps of eDNA analyses (laboratory, bioinformatics), to improve the quality of results and allow an efficient use of the site occupancy-detection modelling (SODM) framework for limiting false presences in eDNA analysis. © 2016 John Wiley & Sons Ltd.

  1. E-SMART system for in-situ detection of environmental contaminants. Quarterly technical progress report, July--September 1996

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    NONE

    1996-10-01

    General Atomics (GA) leads a team of industrial, academic, and government organizations to develop the Environmental Systems Management, Analysis and Reporting neTwork (E-SMART) for the Defense Advanced Research Project Agency (DARPA), by way of this Technology Reinvestment Project (TRP). E-SMART defines a standard by which networks of smart sensing, sampling, and control devices can interoperate. E-SMART is intended to be an open standard, available to any equipment manufacturer. The user will be provided a standard platform on which a site-specific monitoring plan can be implemented using sensors and actuators from various manufacturers and upgraded as new monitoring devices become commerciallymore » available. This project will further develop and advance the E-SMART standardized network protocol to include new sensors, sampling systems, and graphical user interfaces.« less

  2. Identifying environmental variables explaining genotype-by-environment interaction for body weight of rainbow trout (Onchorynchus mykiss): reaction norm and factor analytic models.

    PubMed

    Sae-Lim, Panya; Komen, Hans; Kause, Antti; Mulder, Han A

    2014-02-26

    Identifying the relevant environmental variables that cause GxE interaction is often difficult when they cannot be experimentally manipulated. Two statistical approaches can be applied to address this question. When data on candidate environmental variables are available, GxE interaction can be quantified as a function of specific environmental variables using a reaction norm model. Alternatively, a factor analytic model can be used to identify the latent common factor that explains GxE interaction. This factor can be correlated with known environmental variables to identify those that are relevant. Previously, we reported a significant GxE interaction for body weight at harvest in rainbow trout reared on three continents. Here we explore their possible causes. Reaction norm and factor analytic models were used to identify which environmental variables (age at harvest, water temperature, oxygen, and photoperiod) may have caused the observed GxE interaction. Data on body weight at harvest was recorded on 8976 offspring reared in various locations: (1) a breeding environment in the USA (nucleus), (2) a recirculating aquaculture system in the Freshwater Institute in West Virginia, USA, (3) a high-altitude farm in Peru, and (4) a low-water temperature farm in Germany. Akaike and Bayesian information criteria were used to compare models. The combination of days to harvest multiplied with daily temperature (Day*Degree) and photoperiod were identified by the reaction norm model as the environmental variables responsible for the GxE interaction. The latent common factor that was identified by the factor analytic model showed the highest correlation with Day*Degree. Day*Degree and photoperiod were the environmental variables that differed most between Peru and other environments. Akaike and Bayesian information criteria indicated that the factor analytical model was more parsimonious than the reaction norm model. Day*Degree and photoperiod were identified as environmental variables responsible for the strong GxE interaction for body weight at harvest in rainbow trout across four environments. Both the reaction norm and the factor analytic models can help identify the environmental variables responsible for GxE interaction. A factor analytic model is preferred over a reaction norm model when limited information on differences in environmental variables between farms is available.

  3. Identifying environmental variables explaining genotype-by-environment interaction for body weight of rainbow trout (Onchorynchus mykiss): reaction norm and factor analytic models

    PubMed Central

    2014-01-01

    Background Identifying the relevant environmental variables that cause GxE interaction is often difficult when they cannot be experimentally manipulated. Two statistical approaches can be applied to address this question. When data on candidate environmental variables are available, GxE interaction can be quantified as a function of specific environmental variables using a reaction norm model. Alternatively, a factor analytic model can be used to identify the latent common factor that explains GxE interaction. This factor can be correlated with known environmental variables to identify those that are relevant. Previously, we reported a significant GxE interaction for body weight at harvest in rainbow trout reared on three continents. Here we explore their possible causes. Methods Reaction norm and factor analytic models were used to identify which environmental variables (age at harvest, water temperature, oxygen, and photoperiod) may have caused the observed GxE interaction. Data on body weight at harvest was recorded on 8976 offspring reared in various locations: (1) a breeding environment in the USA (nucleus), (2) a recirculating aquaculture system in the Freshwater Institute in West Virginia, USA, (3) a high-altitude farm in Peru, and (4) a low-water temperature farm in Germany. Akaike and Bayesian information criteria were used to compare models. Results The combination of days to harvest multiplied with daily temperature (Day*Degree) and photoperiod were identified by the reaction norm model as the environmental variables responsible for the GxE interaction. The latent common factor that was identified by the factor analytic model showed the highest correlation with Day*Degree. Day*Degree and photoperiod were the environmental variables that differed most between Peru and other environments. Akaike and Bayesian information criteria indicated that the factor analytical model was more parsimonious than the reaction norm model. Conclusions Day*Degree and photoperiod were identified as environmental variables responsible for the strong GxE interaction for body weight at harvest in rainbow trout across four environments. Both the reaction norm and the factor analytic models can help identify the environmental variables responsible for GxE interaction. A factor analytic model is preferred over a reaction norm model when limited information on differences in environmental variables between farms is available. PMID:24571451

  4. Modeling the Sensitivity of Field Surveys for Detection of Environmental DNA (eDNA)

    PubMed Central

    Schultz, Martin T.; Lance, Richard F.

    2015-01-01

    The environmental DNA (eDNA) method is the practice of collecting environmental samples and analyzing them for the presence of a genetic marker specific to a target species. Little is known about the sensitivity of the eDNA method. Sensitivity is the probability that the target marker will be detected if it is present in the water body. Methods and tools are needed to assess the sensitivity of sampling protocols, design eDNA surveys, and interpret survey results. In this study, the sensitivity of the eDNA method is modeled as a function of ambient target marker concentration. The model accounts for five steps of sample collection and analysis, including: 1) collection of a filtered water sample from the source; 2) extraction of DNA from the filter and isolation in a purified elution; 3) removal of aliquots from the elution for use in the polymerase chain reaction (PCR) assay; 4) PCR; and 5) genetic sequencing. The model is applicable to any target species. For demonstration purposes, the model is parameterized for bighead carp (Hypophthalmichthys nobilis) and silver carp (H. molitrix) assuming sampling protocols used in the Chicago Area Waterway System (CAWS). Simulation results show that eDNA surveys have a high false negative rate at low concentrations of the genetic marker. This is attributed to processing of water samples and division of the extraction elution in preparation for the PCR assay. Increases in field survey sensitivity can be achieved by increasing sample volume, sample number, and PCR replicates. Increasing sample volume yields the greatest increase in sensitivity. It is recommended that investigators estimate and communicate the sensitivity of eDNA surveys to help facilitate interpretation of eDNA survey results. In the absence of such information, it is difficult to evaluate the results of surveys in which no water samples test positive for the target marker. It is also recommended that invasive species managers articulate concentration-based sensitivity objectives for eDNA surveys. In the absence of such information, it is difficult to design appropriate sampling protocols. The model provides insights into how sampling protocols can be designed or modified to achieve these sensitivity objectives. PMID:26509674

  5. Modeling the Sensitivity of Field Surveys for Detection of Environmental DNA (eDNA).

    PubMed

    Schultz, Martin T; Lance, Richard F

    2015-01-01

    The environmental DNA (eDNA) method is the practice of collecting environmental samples and analyzing them for the presence of a genetic marker specific to a target species. Little is known about the sensitivity of the eDNA method. Sensitivity is the probability that the target marker will be detected if it is present in the water body. Methods and tools are needed to assess the sensitivity of sampling protocols, design eDNA surveys, and interpret survey results. In this study, the sensitivity of the eDNA method is modeled as a function of ambient target marker concentration. The model accounts for five steps of sample collection and analysis, including: 1) collection of a filtered water sample from the source; 2) extraction of DNA from the filter and isolation in a purified elution; 3) removal of aliquots from the elution for use in the polymerase chain reaction (PCR) assay; 4) PCR; and 5) genetic sequencing. The model is applicable to any target species. For demonstration purposes, the model is parameterized for bighead carp (Hypophthalmichthys nobilis) and silver carp (H. molitrix) assuming sampling protocols used in the Chicago Area Waterway System (CAWS). Simulation results show that eDNA surveys have a high false negative rate at low concentrations of the genetic marker. This is attributed to processing of water samples and division of the extraction elution in preparation for the PCR assay. Increases in field survey sensitivity can be achieved by increasing sample volume, sample number, and PCR replicates. Increasing sample volume yields the greatest increase in sensitivity. It is recommended that investigators estimate and communicate the sensitivity of eDNA surveys to help facilitate interpretation of eDNA survey results. In the absence of such information, it is difficult to evaluate the results of surveys in which no water samples test positive for the target marker. It is also recommended that invasive species managers articulate concentration-based sensitivity objectives for eDNA surveys. In the absence of such information, it is difficult to design appropriate sampling protocols. The model provides insights into how sampling protocols can be designed or modified to achieve these sensitivity objectives.

  6. Environmental and Economic Assessment of Electrothermal Swing Adsorption of Air Emissions from Sheet-Foam Production Compared to Conventional Abatement Techniques.

    PubMed

    Johnsen, David L; Emamipour, Hamidreza; Guest, Jeremy S; Rood, Mark J

    2016-02-02

    A life-cycle assessment (LCA) and cost analysis are presented comparing the environmental and economic impacts of using regenerative thermal oxidizer (RTO), granular activated carbon (GAC), and activated carbon fiber cloth (ACFC) systems to treat gaseous emissions from sheet-foam production. The ACFC system has the lowest operational energy consumption (i.e., 19.2, 8.7, and 3.4 TJ/year at a full-scale facility for RTO, GAC, and ACFC systems, respectively). The GAC system has the smallest environmental impacts across most impact categories for the use of electricity from select states in the United States that produce sheet foam. Monte Carlo simulations indicate the GAC and ACFC systems perform similarly (within one standard deviation) for seven of nine environmental impact categories considered and have lower impacts than the RTO for every category for the use of natural gas to produce electricity. The GAC and ACFC systems recover adequate isobutane to pay for themselves through chemical-consumption offsets, whereas the net present value of the RTO is $4.1 M (20 years, $0.001/m(3) treated). The adsorption systems are more environmentally and economically competitive than the RTO due to recovered isobutane for the production process and are recommended for resource recovery from (and treatment of) sheet-foam-production exhaust gas. Research targets for these adsorption systems should focus on increasing adsorptive capacity and saturation of GAC systems and decreasing electricity and N2 consumption of ACFC systems.

  7. Key genes and pathways in measles and their interaction with environmental chemicals.

    PubMed

    Zhang, Rongqiang; Jiang, Hualin; Li, Fengying; Su, Ning; Ding, Yi; Mao, Xiang; Ren, Dan; Wang, Jing

    2018-06-01

    The aim of the present study was to explore key genes that may have a role in the pathology of measles virus infection and to clarify the interaction networks between environmental factors and differentially expressed genes (DEGs). After screening the database of the Gene Expression Omnibus of the National Center for Biotechnology Information, the dataset GSE5808 was downloaded and analyzed. A global normalization method was performed to minimize data inconsistencies and heterogeneity. DEGs during different stages of measles virus infection were explored using R software (v3.4.0). Gene Ontology and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis of the DEGs were performed using Cytoscape 3.4.0 software. A protein-protein interaction (PPI) network of the DEGs was obtained from the STRING database v9.05. A total of 43 DEGs were obtained from four analyzed sample groups, including 10 highly expressed genes and 33 genes with decreased expression. The most enriched pathways based on KEGG analysis were fatty acid elongation, cytokine-cytokine receptor interaction and RNA degradation. The genes mentioned in the PPI network were mainly associated with protein binding and chemokine activity. A total of 219 chemicals were identified that may, jointly or on their own, interact with the 6 DEGs between the control group and patients with measles (at hospital entry), including benzo(a)pyrene (BaP) and tetrachlorodibenzodioxin (TCDD). In conclusion, the present study revealed that chemokines and environmental chemicals, e.g. BaP and TCDD, may affect the development of measles.

  8. Tracing social interactions in Pleistocene North America via 3D model analysis of stone tool asymmetry

    PubMed Central

    Sholts, Sabrina B.; Gingerich, Joseph A. M.; Schlager, Stefan; Stanford, Dennis J.

    2017-01-01

    Stone tools, often the sole remnant of prehistoric hunter-gatherer behavior, are frequently used as evidence of ancient human mobility, resource use, and environmental adaptation. In North America, studies of morphological variation in projectile points have provided important insights into migration and interactions of human groups as early as 12–13 kya. Using new approaches to 3D imaging and morphometric analysis, we here quantify bifacial asymmetry among early North American projectile point styles to better understand changes in knapping technique and cultural transmission. Using a sample of 100 fluted bifaces of Clovis and post-Clovis styles in the eastern United States ca. 13,100–9,000 cal BP (i.e., Clovis, Debert-Vail, Bull Brook, Michaud-Neponset/Barnes, and Crowfield), we employed two different approaches for statistical shape analysis: our previously presented method for analysis of 2D flake scar contours, and a new approach for 3D surface analysis using spherical harmonics (SPHARM). Whereas bifacial asymmetry in point shape does not vary significantly across this stylistic sequence, our measure of asymmetric flake scar patterning shows temporal variation that may signify the beginning of regionalization among early New World colonists. PMID:28700598

  9. One-year Survey of human enteroviruses from sewage and the factors affecting virus adsorption to the suspended solids.

    PubMed

    Tao, Zexin; Wang, Zhongtang; Lin, Xiaojuan; Wang, Suting; Wang, Haiyan; Yoshida, Hiromu; Xu, Aiqiang; Song, Yanyan

    2016-08-11

    This study described the results of environmental enterovirus surveillance conducted in Shandong Province of China in 2013. Altogether 39 sewage samples were collected and 873 enterovirus isolates (including 334 polioviruses) belonging to 22 serotypes were obtained. Echovirus (E) -7, coxsackievirus (CV) -B5, E-11, E-6, and E-3 were the most commonly detected non-polio enterovirus serotypes, and phylogeny of E-7 and CV-B5 was described. The numbers of isolates of different serotypes from sewage supernatant were compared with those from the solids. Interestingly, dramatic divergence was observed between the supernatant and solids origin for the serotypes of E-3 and E-6, which were prone to the solids and supernatant, respectively. A following adsorption test with E-3 and E-6 added sewage specimens confirmed the different preference. Furthermore, the adsorption of Sabin poliovirus type 1 to the solids under different conditions was investigated, and the results showed that acid medium, cold temperature, and high solids concentration facilitated the viral adsorption to the solids, whereas change of virus titer did not influence the proportion of adsorption. These results highlighted the importance of combining the enterovirus isolates from the supernatant and solids together in environmental surveillance so as to better understand the local circulation of different serotypes.

  10. One-year Survey of human enteroviruses from sewage and the factors affecting virus adsorption to the suspended solids

    PubMed Central

    Tao, Zexin; Wang, Zhongtang; Lin, Xiaojuan; Wang, Suting; Wang, Haiyan; Yoshida, Hiromu; Xu, Aiqiang; Song, Yanyan

    2016-01-01

    This study described the results of environmental enterovirus surveillance conducted in Shandong Province of China in 2013. Altogether 39 sewage samples were collected and 873 enterovirus isolates (including 334 polioviruses) belonging to 22 serotypes were obtained. Echovirus (E) -7, coxsackievirus (CV) -B5, E-11, E-6, and E-3 were the most commonly detected non-polio enterovirus serotypes, and phylogeny of E-7 and CV-B5 was described. The numbers of isolates of different serotypes from sewage supernatant were compared with those from the solids. Interestingly, dramatic divergence was observed between the supernatant and solids origin for the serotypes of E-3 and E-6, which were prone to the solids and supernatant, respectively. A following adsorption test with E-3 and E-6 added sewage specimens confirmed the different preference. Furthermore, the adsorption of Sabin poliovirus type 1 to the solids under different conditions was investigated, and the results showed that acid medium, cold temperature, and high solids concentration facilitated the viral adsorption to the solids, whereas change of virus titer did not influence the proportion of adsorption. These results highlighted the importance of combining the enterovirus isolates from the supernatant and solids together in environmental surveillance so as to better understand the local circulation of different serotypes. PMID:27510810

  11. Life cycle analysis of pistachio production in Greece.

    PubMed

    Bartzas, Georgios; Komnitsas, Kostas

    2017-10-01

    In the present paper, a life cycle assessment (LCA) study regarding pistachio (Pistacia vera L.) cultivation in Aegina island, Greece, was performed to evaluate the energy use footprint and the associated environmental impacts. In this context, a detailed life cycle inventory was created based on site-survey data and used for a holistic cradle-to-farm gate LCA analysis using the GaBi 6.5 software. The main impact categories assessed were acidification potential (AP), eutrophication potential (EP), global warming potential (GWP), ozone depletion potential (ODP), photochemical ozone creation potential (POCP) and cumulative energy demand (CED). In order to reveal the main environmental concerns pertinent to pistachio production and in turn propose measures for the reduction of environmental and energetic impacts, three scenarios were compared, namely the Baseline scenario (BS) that involves current cultivation practices, the Green Energy (GE) scenario that involves the use of biological fertilizers i.e. compost, and the Waste Utilization (WU) scenario that involves the production of biochar from pistachio and other agricultural wastes and its subsequent soil application to promote carbon sequestration and improve soil quality. Based on the results of this study, the use of compost for fertilization (GE scenario), which results in approximately 9% savings in terms of energy consumption and the five environmental impact categories studied compared to BS scenario, is considered a promising alternative cultivation strategy. Slightly higher savings (10% on average) in terms of the five calculated environmental impact categories, compared to the BS scenario, were indicated when the WU scenario was considered. Regarding energy consumption, the WU scenario results in minor increase, 3%, compared to the BS scenario. Results of uncertainty analysis performed using the Monte Carlo technique and contribution analysis showed that GE and WU scenarios offer reliable and significant eco-profile improvements for pistachio production in the study area compared to the current situation. Copyright © 2017 Elsevier B.V. All rights reserved.

  12. Draft Environmental Impact Statement: Peacekeeper Rail Garrison Program

    DTIC Science & Technology

    1988-06-01

    2-13 3.0 ENVIRONMENTAL ANALYSIS METHODS ................................ 3-1 3.1 Methods for Assessing Nationwide Impacts...3-2 3.1.1 Methods for Assessing National Economic Impacts ........... 3-2 3.1.2 Methods for Assessing Railroad Network...3.2.4 Methods for Assessing Existing and Future Baseline Conditions .......................................... 3-6 3.2.5 Methods for Assessing

  13. DEVELOPMENT OF THE METAL FINISHING FACILITY RISK SCREENING TOOL

    EPA Science Inventory

    Enhancement of the US Environmental Protection Agency's
    Metal Finishing Facility Risk Screening Tool (MFFRST)

    William M. Barrett Jr, Ph.D., P.E. , P.E.; Paul Harten, Ph.D.1, Matt Lorber , Charles Peck , and Steve Schwartz, P.E., Q.E.P.3

    Recently, the US Environ...

  14. Finding the right compromise between productivity and environmental efficiency on high input tropical dairy farms: a case study.

    PubMed

    Berre, David; Blancard, Stéphane; Boussemart, Jean-Philippe; Leleu, Hervé; Tillard, Emmanuel

    2014-12-15

    This study focused on the trade-off between milk production and its environmental impact on greenhouse gas (GHG) emissions and nitrogen surplus in a high input tropical system. We first identified the objectives of the three main stakeholders in the dairy sector (farmers, a milk cooperative and environmentalists). The main aim of the farmers and cooperative's scenarios was to increase milk production without additional environmental deterioration but with the possibility of increasing the inputs for the cooperative. The environmentalist's objective was to reduce environmental deterioration. Second, we designed a sustainable intensification scenario combining maximization of milk production and minimization of environmental impacts. Third, the objectives for reducing the eco-inefficiency of dairy systems in Reunion Island were incorporated in a framework for activity analysis, which was used to model a technological approach with desirable and undesirable outputs. Of the four scenarios, the sustainable intensification scenario produced the best results, with a potential decrease of 238 g CO2-e per liter of milk (i.e. a reduction of 13.93% compared to the current level) and a potential 7.72 L increase in milk produced for each kg of nitrogen surplus (i.e. an increase of 16.45% compared to the current level). These results were based on the best practices observed in Reunion Island and optimized manure management, crop-livestock interactions, and production processes. Our results also showed that frontier efficiency analysis can shed new light on the challenge of developing sustainable intensification in high input tropical dairy systems. Copyright © 2014 Elsevier Ltd. All rights reserved.

  15. Genotypic Diversity of Escherichia coli in the Water and Soil of Tropical Watersheds in Hawaii ▿

    PubMed Central

    Goto, Dustin K.; Yan, Tao

    2011-01-01

    High levels of Escherichia coli were frequently detected in tropical soils in Hawaii, which present important environmental sources of E. coli to water bodies. This study systematically examined E. coli isolates from water and soil of several watersheds in Hawaii and observed high overall genotypic diversity (35.5% unique genotypes). In the Manoa watershed, fewer than 9.3% of the observed E. coli genotypes in water and 6.6% in soil were shared between different sampling sites, suggesting the lack of dominant fecal sources in the watershed. High temporal variability of E. coli genotypes in soil was also observed, which suggests a dynamic E. coli population corresponding with the frequently observed high concentrations in tropical soils. When E. coli genotypes detected from the same sampling events were compared, limited sharing between the soil and water samples was observed in the majority of comparisons (73.5%). However, several comparisons reported up to 33.3% overlap of E. coli genotypes between soil and water, illustrating the potential for soil-water interactions under favorable environmental conditions. In addition, genotype accumulation curves for E. coli from water and soil indicated that the sampling efforts in the Manoa watershed could not exhaust the overall genotypic diversity. Comparisons of E. coli genotypes from other watersheds on Oahu, Hawaii, identified no apparent grouping according to sampling locations. The results of the present study demonstrate the complexity of using E. coli as a fecal indicator bacterium in tropical watersheds and highlight the need to differentiate environmental sources of E. coli from fecal sources in water quality monitoring. PMID:21515724

  16. Environmental factors prevail over dispersal constraints in determining the distribution and assembly of Trichoptera species in mountain lakes.

    PubMed

    de Mendoza, Guillermo; Ventura, Marc; Catalan, Jordi

    2015-07-01

    Aiming to elucidate whether large-scale dispersal factors or environmental species sorting prevail in determining patterns of Trichoptera species composition in mountain lakes, we analyzed the distribution and assembly of the most common Trichoptera (Plectrocnemia laetabilis, Polycentropus flavomaculatus, Drusus rectus, Annitella pyrenaea, and Mystacides azurea) in the mountain lakes of the Pyrenees (Spain, France, Andorra) based on a survey of 82 lakes covering the geographical and environmental extremes of the lake district. Spatial autocorrelation in species composition was determined using Moran's eigenvector maps (MEM). Redundancy analysis (RDA) was applied to explore the influence of MEM variables and in-lake, and catchment environmental variables on Trichoptera assemblages. Variance partitioning analysis (partial RDA) revealed the fraction of species composition variation that could be attributed uniquely to either environmental variability or MEM variables. Finally, the distribution of individual species was analyzed in relation to specific environmental factors using binomial generalized linear models (GLM). Trichoptera assemblages showed spatial structure. However, the most relevant environmental variables in the RDA (i.e., temperature and woody vegetation in-lake catchments) were also related with spatial variables (i.e., altitude and longitude). Partial RDA revealed that the fraction of variation in species composition that was uniquely explained by environmental variability was larger than that uniquely explained by MEM variables. GLM results showed that the distribution of species with longitudinal bias is related to specific environmental factors with geographical trend. The environmental dependence found agrees with the particular traits of each species. We conclude that Trichoptera species distribution and composition in the lakes of the Pyrenees are governed predominantly by local environmental factors, rather than by dispersal constraints. For boreal lakes, with similar environmental conditions, a strong role of dispersal capacity has been suggested. Further investigation should address the role of spatial scaling, namely absolute geographical distances constraining dispersal and steepness of environmental gradients at short distances.

  17. Environmental factors prevail over dispersal constraints in determining the distribution and assembly of Trichoptera species in mountain lakes

    PubMed Central

    de Mendoza, Guillermo; Ventura, Marc; Catalan, Jordi

    2015-01-01

    Aiming to elucidate whether large-scale dispersal factors or environmental species sorting prevail in determining patterns of Trichoptera species composition in mountain lakes, we analyzed the distribution and assembly of the most common Trichoptera (Plectrocnemia laetabilis, Polycentropus flavomaculatus, Drusus rectus, Annitella pyrenaea, and Mystacides azurea) in the mountain lakes of the Pyrenees (Spain, France, Andorra) based on a survey of 82 lakes covering the geographical and environmental extremes of the lake district. Spatial autocorrelation in species composition was determined using Moran’s eigenvector maps (MEM). Redundancy analysis (RDA) was applied to explore the influence of MEM variables and in-lake, and catchment environmental variables on Trichoptera assemblages. Variance partitioning analysis (partial RDA) revealed the fraction of species composition variation that could be attributed uniquely to either environmental variability or MEM variables. Finally, the distribution of individual species was analyzed in relation to specific environmental factors using binomial generalized linear models (GLM). Trichoptera assemblages showed spatial structure. However, the most relevant environmental variables in the RDA (i.e., temperature and woody vegetation in-lake catchments) were also related with spatial variables (i.e., altitude and longitude). Partial RDA revealed that the fraction of variation in species composition that was uniquely explained by environmental variability was larger than that uniquely explained by MEM variables. GLM results showed that the distribution of species with longitudinal bias is related to specific environmental factors with geographical trend. The environmental dependence found agrees with the particular traits of each species. We conclude that Trichoptera species distribution and composition in the lakes of the Pyrenees are governed predominantly by local environmental factors, rather than by dispersal constraints. For boreal lakes, with similar environmental conditions, a strong role of dispersal capacity has been suggested. Further investigation should address the role of spatial scaling, namely absolute geographical distances constraining dispersal and steepness of environmental gradients at short distances. PMID:26257867

  18. Structure-Activity Relationships for Rates of Aromatic Amine Oxidation by Manganese Dioxide

    DOE PAGES

    Salter-Blanc, Alexandra J.; Bylaska, Eric J.; Lyon, Molly A.; ...

    2016-04-13

    New energetic compounds are designed to minimize their potential environmental impacts, which includes their transformation and the fate and effects of their transformation products. The nitro groups of energetic compounds are readily reduced to amines, and the resulting aromatic amines are subject to oxidation and coupling reactions. Manganese dioxide (MnO 2) is a common environmental oxidant and model system for kinetic studies of aromatic amine oxidation. Here in this study, a training set of new and previously reported kinetic data for the oxidation of model and energetic-derived aromatic amines was assembled and subjected to correlation analysis against descriptor variables that ranged from general purpose [Hammettmore » $$\\sigma$$ constants ($$\\sigma^-$$), pK as of the amines, and energies of the highest occupied molecular orbital (E HOMO)] to specific for the likely rate-limiting step [one-electron oxidation potentials (E ox)]. The selection of calculated descriptors (pK a), E HOMO, and E ox) was based on validation with experimental data. All of the correlations gave satisfactory quantitative structure-activity relationships (QSARs), but they improved with the specificity of the descriptor. The scope of correlation analysis was extended beyond MnO 2 to include literature data on aromatic amine oxidation by other environmentally relevant oxidants (ozone, chlorine dioxide, and phosphate and carbonate radicals) by correlating relative rate constants (normalized to 4-chloroaniline) to E HOMO (calculated with a modest level of theory).« less

  19. Structure-Activity Relationships for Rates of Aromatic Amine Oxidation by Manganese Dioxide

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Salter-Blanc, Alexandra J.; Bylaska, Eric J.; Lyon, Molly A.

    New energetic compounds are designed to minimize their potential environmental impacts, which includes their transformation and the fate and effects of their transformation products. The nitro groups of energetic compounds are readily reduced to amines, and the resulting aromatic amines are subject to oxidation and coupling reactions. Manganese dioxide (MnO 2) is a common environmental oxidant and model system for kinetic studies of aromatic amine oxidation. Here in this study, a training set of new and previously reported kinetic data for the oxidation of model and energetic-derived aromatic amines was assembled and subjected to correlation analysis against descriptor variables that ranged from general purpose [Hammettmore » $$\\sigma$$ constants ($$\\sigma^-$$), pK as of the amines, and energies of the highest occupied molecular orbital (E HOMO)] to specific for the likely rate-limiting step [one-electron oxidation potentials (E ox)]. The selection of calculated descriptors (pK a), E HOMO, and E ox) was based on validation with experimental data. All of the correlations gave satisfactory quantitative structure-activity relationships (QSARs), but they improved with the specificity of the descriptor. The scope of correlation analysis was extended beyond MnO 2 to include literature data on aromatic amine oxidation by other environmentally relevant oxidants (ozone, chlorine dioxide, and phosphate and carbonate radicals) by correlating relative rate constants (normalized to 4-chloroaniline) to E HOMO (calculated with a modest level of theory).« less

  20. 32 CFR 651.45 - Steps in preparing and processing an EIS.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ...) ENVIRONMENTAL QUALITY ENVIRONMENTAL ANALYSIS OF ARMY ACTIONS (AR 200-2) Environmental Impact Statement § 651.45... alternatives, and state why the action may have unknown and/or significant environmental impacts. (3) The... delegations and committees, governors, national environmental organizations, the DOD and federal agency...

  1. 32 CFR 651.45 - Steps in preparing and processing an EIS.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ...) ENVIRONMENTAL QUALITY ENVIRONMENTAL ANALYSIS OF ARMY ACTIONS (AR 200-2) Environmental Impact Statement § 651.45... alternatives, and state why the action may have unknown and/or significant environmental impacts. (3) The... delegations and committees, governors, national environmental organizations, the DOD and federal agency...

  2. 32 CFR 651.45 - Steps in preparing and processing an EIS.

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ...) ENVIRONMENTAL QUALITY ENVIRONMENTAL ANALYSIS OF ARMY ACTIONS (AR 200-2) Environmental Impact Statement § 651.45... alternatives, and state why the action may have unknown and/or significant environmental impacts. (3) The... delegations and committees, governors, national environmental organizations, the DOD and federal agency...

  3. 32 CFR 651.45 - Steps in preparing and processing an EIS.

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ...) ENVIRONMENTAL QUALITY ENVIRONMENTAL ANALYSIS OF ARMY ACTIONS (AR 200-2) Environmental Impact Statement § 651.45... alternatives, and state why the action may have unknown and/or significant environmental impacts. (3) The... delegations and committees, governors, national environmental organizations, the DOD and federal agency...

  4. Widespread covariation of early environmental exposures and trait-associated polygenic variation.

    PubMed

    Krapohl, E; Hannigan, L J; Pingault, J-B; Patel, H; Kadeva, N; Curtis, C; Breen, G; Newhouse, S J; Eley, T C; O'Reilly, P F; Plomin, R

    2017-10-31

    Although gene-environment correlation is recognized and investigated by family studies and recently by SNP-heritability studies, the possibility that genetic effects on traits capture environmental risk factors or protective factors has been neglected by polygenic prediction models. We investigated covariation between trait-associated polygenic variation identified by genome-wide association studies (GWASs) and specific environmental exposures, controlling for overall genetic relatedness using a genomic relatedness matrix restricted maximum-likelihood model. In a UK-representative sample ( n = 6,710), we find widespread covariation between offspring trait-associated polygenic variation and parental behavior and characteristics relevant to children's developmental outcomes-independently of population stratification. For instance, offspring genetic risk for schizophrenia was associated with paternal age ( R 2 = 0.002; P = 1e-04), and offspring education-associated variation was associated with variance in breastfeeding ( R 2 = 0.021; P = 7e-30), maternal smoking during pregnancy ( R 2 = 0.008; P = 5e-13), parental smacking ( R 2 = 0.01; P = 4e-15), household income ( R 2 = 0.032; P = 1e-22), watching television ( R 2 = 0.034; P = 5e-47), and maternal education ( R 2 = 0.065; P = 3e-96). Education-associated polygenic variation also captured covariation between environmental exposures and children's inattention/hyperactivity, conduct problems, and educational achievement. The finding that genetic variation identified by trait GWASs partially captures environmental risk factors or protective factors has direct implications for risk prediction models and the interpretation of GWAS findings.

  5. A blocking primer increases specificity in environmental DNA detection of bull trout (Salvelinus confluentus)

    Treesearch

    Taylor M. Wilcox; Michael K. Schwartz; Kevin S. McKelvey; Michael K. Young; Winsor H. Lowe

    2014-01-01

    Environmental DNA (eDNA) is increasingly applied as a highly sensitive way to detect aquatic animals non-invasively. However, distinguishing closely related taxa can be particularly challenging. Previous studies of ancient DNA and genetic diet analysis have used blocking primers to enrich target template in the presence of abundant, non-target DNA. Here we apply a...

  6. A Review of Research on Environmental Education in Non-Traditional Settings in Turkey, 2000 and 2011

    ERIC Educational Resources Information Center

    Erdogan, Mehmet; Usak, Muhammet; Bahar, Mehmet

    2013-01-01

    The purpose of the present study was to collect and analyze the research on environmental education in non-traditional settings in Turkey undertaken with various subjects (e.g. students, graduates and teachers) and published over the years of 2000-2011. For systematic analysis, selected data-bases and journals were scrutinized across five…

  7. Multicriteria decision analysis applied to Glen Canyon Dam

    USGS Publications Warehouse

    Flug, M.; Seitz, H.L.H.; Scott, J.F.

    2000-01-01

    Conflicts in water resources exist because river-reservoir systems are managed to optimize traditional benefits (e.g., hydropower and flood control), which are historically quantified in economic terms, whereas natural and environmental resources, including in-stream and riparian resources, are more difficult or impossible to quantify in economic terms. Multicriteria decision analysis provides a quantitative approach to evaluate resources subject to river basin management alternatives. This objective quantification method includes inputs from special interest groups, the general public, and concerned individuals, as well as professionals for each resource considered in a trade-off analysis. Multicriteria decision analysis is applied to resources and flow alternatives presented in the environmental impact statement for Glen Canyon Dam on the Colorado River. A numeric rating and priority-weighting scheme is used to evaluate 29 specific natural resource attributes, grouped into seven main resource objectives, for nine flow alternatives enumerated in the environmental impact statement.

  8. Factor analysis in the Genetics of Asthma International Network family study identifies five major quantitative asthma phenotypes.

    PubMed

    Pillai, S G; Tang, Y; van den Oord, E; Klotsman, M; Barnes, K; Carlsen, K; Gerritsen, J; Lenney, W; Silverman, M; Sly, P; Sundy, J; Tsanakas, J; von Berg, A; Whyte, M; Ortega, H G; Anderson, W H; Helms, P J

    2008-03-01

    Asthma is a clinically heterogeneous disease caused by a complex interaction between genetic susceptibility and diverse environmental factors. In common with other complex diseases the lack of a standardized scheme to evaluate the phenotypic variability poses challenges in identifying the contribution of genes and environments to disease expression. To determine the minimum number of sets of features required to characterize subjects with asthma which will be useful in identifying important genetic and environmental contributors. Methods Probands aged 7-35 years with physician diagnosed asthma and symptomatic siblings were identified in 1022 nuclear families from 11 centres in six countries forming the Genetics of Asthma International Network. Factor analysis was used to identify distinct phenotypes from questionnaire, clinical, and laboratory data, including baseline pulmonary function, allergen skin prick test (SPT). Five distinct factors were identified:(1) baseline pulmonary function measures [forced expiratory volume in 1 s (FEV(1)) and forced vital capacity (FVC)], (2) specific allergen sensitization by SPT, (3) self-reported allergies, (4) symptoms characteristic of rhinitis and (5) symptoms characteristic of asthma. Replication in symptomatic siblings was consistent with shared genetic and/or environmental effects, and was robust across age groups, gender, and centres. Cronbach's alpha ranged from 0.719 to 0.983 suggesting acceptable internal scale consistencies. Derived scales were correlated with serum IgE, methacholine PC(20), age and asthma severity (interrupted sleep). IgE correlated with all three atopy-related factors, the strongest with the SPT factor whereas severity only correlated with baseline lung function, and with symptoms characteristic of rhinitis and of asthma. In children and adolescents with established asthma, five distinct sets of correlated patient characteristics appear to represent important aspects of the disease. Factor scores as quantitative traits may be better phenotypes in epidemiological and genetic analyses than those categories derived from the presence or absence of combinations of +ve SPTs and/or elevated IgE.

  9. Exploring the Objective and Perceived Environmental Attributes of Older Adults’ Neighborhood Walking Routes: A Mixed Methods Analysis

    PubMed Central

    Moran, Mika R.; Werner, Perla; Doron, Israel; HaGani, Neta; Benvenisti, Yael; King, Abby C.; Winter, Sandra J.; Sheats, Jylana L.; Garber, Randi; Motro, Hadas; Ergon, Shlomit

    2018-01-01

    Walking is a central form of physical activity among older adults that is associated with the physical environment at various scales. This mixed-methods study employs a concurrent nested design to explore objective and perceived environmental characteristics of older adults’ local walking routes. This was achieved by integrating quantitative Geographic Information System (GIS) data with qualitative data obtained using the Stanford Discovery Tool (DT). Fifty-nine community-dwelling middle-aged and older adults (14 men and 45 women aged 50+) were recruited in a snowball approach through community centers in the city of Haifa (Israel). Four neighborhood environment themes were identified: pedestrian infrastructure, access to destinations, aesthetics, and environmental quality. Both geometrical traits (i.e., distance, slope) and urban features (i.e., land-uses, greenery) of the route may impact the experience of walking. The findings thus highlight the importance of micro-scale environmental elements in shaping environmental perceptions, which may consequently influence the choice of being active. PMID:27992252

  10. Relative Linkages of Stream Dissolved Oxygen with the Climatic, Hydrological, and Biogeochemical Drivers across the East Coast of U.S.A.

    NASA Astrophysics Data System (ADS)

    Abdul-Aziz, O. I.; Ahmed, S.

    2017-12-01

    Dissolved oxygen (DO) is a key indicator of stream water quality and ecosystem health. However, the temporal dynamics of stream DO is controlled by a multitude of interacting environmental drivers. The relative linkages of stream DO with the relevant environmental drivers were determined in this study across the U.S. East Coast by employing a systematic data analytics approach. The study analyzed temporal data for 51 water quality monitoring stations from USGS NWIS and EPA STORET databases. Principal component analysis and factor analysis, along with Pearson's correlation analysis, were applied to identify the interrelationships and unravel latent patterns among DO and the environmental drivers. Power law based partial least squares regression models with a bootstarp Monte-Carlo procedure (1000 iterations) were developed to reliably estimate the environmental linkages of DO by resolving multicollinearity. Based on the similarity of dominant drivers, the streams were categorized into three distinct environmental regimes. Stream DO in the northern part of temperate zone (e.g., northeast coast) had the strongest linkage with water temperature; suggesting an environmental regime with dominant climatic control. However, stream DO in the tropical zones (e.g., southeast Florida) was mostly driven by pH; indicating an environmental regime likely controlled by redox chemistry. Further, a transitional regime was found between the temperate and tropical zones, where stream DO was controlled by both water temperature and pH. The results suggested a strong effect of the climatic gradient (temperate to tropical) on stream DO along the East Coast. The identified environmental regimes and the regime-specific relative linkages provided new information on the dominant controls of coastal stream water quality dynamics. The findings would guide the planning and management of coastal stream water quality and ecosystem health across the U.S. East Coast and around the world.

  11. 30 CFR 580.30 - What activities will not require environmental analysis?

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... analysis? 580.30 Section 580.30 Mineral Resources BUREAU OF OCEAN ENERGY MANAGEMENT, DEPARTMENT OF THE... adversely affect shellfish beds, marine mammals, or an endangered species or if permitted by the National Marine Fisheries Service or another Federal agency; (e) Meteorological observations and measurements...

  12. 30 CFR 580.30 - What activities will not require environmental analysis?

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ... analysis? 580.30 Section 580.30 Mineral Resources BUREAU OF OCEAN ENERGY MANAGEMENT, DEPARTMENT OF THE... adversely affect shellfish beds, marine mammals, or an endangered species or if permitted by the National Marine Fisheries Service or another Federal agency; (e) Meteorological observations and measurements...

  13. 30 CFR 580.30 - What activities will not require environmental analysis?

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ... analysis? 580.30 Section 580.30 Mineral Resources BUREAU OF OCEAN ENERGY MANAGEMENT, DEPARTMENT OF THE... adversely affect shellfish beds, marine mammals, or an endangered species or if permitted by the National Marine Fisheries Service or another Federal agency; (e) Meteorological observations and measurements...

  14. An in-house manual for building APEX projects using ArcAPEX

    USDA-ARS?s Scientific Manuscript database

    The Agricultural Policy Environmental eXtender (APEX) provides the foundation for water quality and natural resource analysis across a wide array of USDA initiatives, projects and programs. The model has been utilized in both the national Conservation Effects Assessment Project (CEAP) analysis and ...

  15. Comparison of two U.S. power-plant carbon dioxide emissions data sets

    USGS Publications Warehouse

    Ackerman, K.V.; Sundquist, E.T.

    2008-01-01

    Estimates of fossil-fuel CO2 emissions are needed to address a variety of climate-change mitigation concerns over a broad range of spatial and temporal scales. We compared two data sets that report power-plant CO 2 emissions in the conterminous U.S. for 2004, the most recent year reported in both data sets. The data sets were obtained from the Department of Energy's Energy Information Administration (EIA) and the Environmental Protection Agency's eGRID database. Conterminous U.S. total emissions computed from the data sets differed by 3.5% for total plant emissions (electricity plus useful thermal output) and 2.3% for electricity generation only. These differences are well within previous estimates of uncertainty in annual U.S. fossil-fuel emissions. However, the corresponding average absolute differences between estimates of emissions from individual power plants were much larger, 16.9% and 25.3%, respectively. By statistical analysis, we identified several potential sources of differences between EIA and eGRID estimates for individual plants. Estimates that are based partly or entirely on monitoring of stack gases (reported by eGRID only) differed significantly from estimates based on fuel consumption (as reported by EIA). Differences in accounting methods appear to explain differences in estimates for emissions from electricity generation from combined heat and power plants, and for total and electricity generation emissions from plants that burn nonconventional fuels (e.g., biomass). Our analysis suggests the need for care in utilizing emissions data from individual power plants, and the need for transparency in documenting the accounting and monitoring methods used to estimate emissions.

  16. A socio-ecological autopsy of the E. coli O157:H7 outbreak in Walkerton, Ontario, Canada.

    PubMed

    Ali, S Harris

    2004-06-01

    The socio-political context of modern environmental health disasters tends to be defined as being outside the scope of official public health and epidemiological investigations into the causes of such disasters. On the other hand, popular accounts of these disasters tend to focus exclusively on the role of particular individuals and/or political actors, while minimizing the role of ecological factors. It is argued that an exclusive focus on either set of causal factors gives an incomplete or distorted picture of the origins of an environmental health disaster. In this paper, a socio-ecological analysis is developed to demonstrate how the largest outbreak of waterborne E. coli O157:H7 in Canadian history was the emergent product of a complex interplay and intertwining of social and ecological processes. The socio-ecological autopsy approach that is developed here traces the social and ecological chain of events that ultimately led to the outbreak and demonstrates, in particular, the need for investigative analysis to focus on the socio-ecological "incubation" of an environmental health disaster. Drawing from both the social sciences (particularly, the sociology of disasters and organizational sociology), and from the ecological sciences (particularly disease ecology), the analysis developed here responds to the call for the application of a more transdisciplinary approach to the study of contemporary environmental health problems.

  17. Application of large-scale computing infrastructure for diverse environmental research applications using GC3Pie

    NASA Astrophysics Data System (ADS)

    Maffioletti, Sergio; Dawes, Nicholas; Bavay, Mathias; Sarni, Sofiane; Lehning, Michael

    2013-04-01

    The Swiss Experiment platform (SwissEx: http://www.swiss-experiment.ch) provides a distributed storage and processing infrastructure for environmental research experiments. The aim of the second phase project (the Open Support Platform for Environmental Research, OSPER, 2012-2015) is to develop the existing infrastructure to provide scientists with an improved workflow. This improved workflow will include pre-defined, documented and connected processing routines. A large-scale computing and data facility is required to provide reliable and scalable access to data for analysis, and it is desirable that such an infrastructure should be free of traditional data handling methods. Such an infrastructure has been developed using the cloud-based part of the Swiss national infrastructure SMSCG (http://www.smscg.ch) and Academic Cloud. The infrastructure under construction supports two main usage models: 1) Ad-hoc data analysis scripts: These scripts are simple processing scripts, written by the environmental researchers themselves, which can be applied to large data sets via the high power infrastructure. Examples of this type of script are spatial statistical analysis scripts (R-based scripts), mostly computed on raw meteorological and/or soil moisture data. These provide processed output in the form of a grid, a plot, or a kml. 2) Complex models: A more intense data analysis pipeline centered (initially) around the physical process model, Alpine3D, and the MeteoIO plugin; depending on the data set, this may require a tightly coupled infrastructure. SMSCG already supports Alpine3D executions as both regular grid jobs and as virtual software appliances. A dedicated appliance with the Alpine3D specific libraries has been created and made available through the SMSCG infrastructure. The analysis pipelines are activated and supervised by simple control scripts that, depending on the data fetched from the meteorological stations, launch new instances of the Alpine3D appliance, execute location-based subroutines at each grid point and store the results back into the central repository for post-processing. An optional extension of this infrastructure will be to provide a 'ring buffer'-type database infrastructure, such that model results (e.g. test runs made to check parameter dependency or for development) can be visualised and downloaded after completion without submitting them to a permanent storage infrastructure. Data organization Data collected from sensors are archived and classified in distributed sites connected with an open-source software middleware, GSN. Publicly available data are available through common web services and via a cloud storage server (based on Swift). Collocation of the data and processing in the cloud would eventually eliminate data transfer requirements. Execution control logic Execution of the data analysis pipelines (for both the R-based analysis and the Alpine3D simulations) has been implemented using the GC3Pie framework developed by UZH. (https://code.google.com/p/gc3pie/). This allows large-scale, fault-tolerant execution of the pipelines to be described in terms of software appliances. GC3Pie also allows supervision of the execution of large campaigns of appliances as a single simulation. This poster will present the fundamental architectural components of the data analysis pipelines together with initial experimental results.

  18. The influence of catalysts on biofuel life cycle analysis (LCA)

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Benavides, Pahola Thathiana; Cronauer, Donald C.; Adom, Felix K.

    Catalysts play an important role in biofuel production but are rarely included in biofuel life cycle analysis (LCA). In this work, we estimate the cradle-to-gate energy consumption and greenhouse gas (GHG) emissions of Pt/γ-Al 2O 3, CoMo/γ-Al 2O 3, and ZSM-5, catalysts that could be used in processes to convert biomass to biofuels. We also consider the potential impacts of catalyst recovery and recycling. Integrating the energy and environmental impacts of CoMo/γ-Al 2O 3 and ZSM-5 into an LCA of renewable gasoline produced via in-situ and ex-situ fast pyrolysis of a blended woody feedstock revealed that the ZSM-5, with cradle-to-gatemore » GHG emissions of 7.7 kg CO 2e/kg, could influence net life-cycle GHG emissions of the renewable gasoline (1.7 gCO 2e/MJ for the in-situ process, 1.2 gCO 2e/MJ for the ex-situ process) by up to 14% depending on the loading rate. CoMo/γ-Al 2O 3 had a greater GHG intensity (9.6 kg CO 2e/kg) than ZSM-5, however, it contributed approximately only 1% to the life-cycle GHG emissions of the renewable gasoline because of the small amount of this catalyst needed per kg of biofuel produced. As a result, given that catalysts can contribute significantly to biofuel life-cycle GHG emissions depending on the GHG intensity of their production and their consumption rates, biofuel LCAs should consider the potential influence of catalysts on LCA results.« less

  19. The influence of catalysts on biofuel life cycle analysis (LCA)

    DOE PAGES

    Benavides, Pahola Thathiana; Cronauer, Donald C.; Adom, Felix K.; ...

    2017-01-21

    Catalysts play an important role in biofuel production but are rarely included in biofuel life cycle analysis (LCA). In this work, we estimate the cradle-to-gate energy consumption and greenhouse gas (GHG) emissions of Pt/γ-Al 2O 3, CoMo/γ-Al 2O 3, and ZSM-5, catalysts that could be used in processes to convert biomass to biofuels. We also consider the potential impacts of catalyst recovery and recycling. Integrating the energy and environmental impacts of CoMo/γ-Al 2O 3 and ZSM-5 into an LCA of renewable gasoline produced via in-situ and ex-situ fast pyrolysis of a blended woody feedstock revealed that the ZSM-5, with cradle-to-gatemore » GHG emissions of 7.7 kg CO 2e/kg, could influence net life-cycle GHG emissions of the renewable gasoline (1.7 gCO 2e/MJ for the in-situ process, 1.2 gCO 2e/MJ for the ex-situ process) by up to 14% depending on the loading rate. CoMo/γ-Al 2O 3 had a greater GHG intensity (9.6 kg CO 2e/kg) than ZSM-5, however, it contributed approximately only 1% to the life-cycle GHG emissions of the renewable gasoline because of the small amount of this catalyst needed per kg of biofuel produced. As a result, given that catalysts can contribute significantly to biofuel life-cycle GHG emissions depending on the GHG intensity of their production and their consumption rates, biofuel LCAs should consider the potential influence of catalysts on LCA results.« less

  20. The effect of positive interactions on temporal turnover of community composition along an environmental gradient.

    PubMed

    Wang, Youshi; Yang, Zhiyong; Zhou, Shurong; Soininen, Janne; Ai, Dexiecuo; Li, Yali; Chu, Chengjin

    2013-01-01

    It has been demonstrated that the interplay between negative and positive interactions simultaneously shapes community structure and composition. However, few studies have attempted to examine the effect of facilitation on compositional changes in communities through time. Additionally, due to the difficulties in collecting the long-term data, it would be useful to indicate the rate of temporal turnover using a readily obtainable metric. Using an individual-based model incorporating plant strategies, we examined the role of facilitation on the temporal turnover of communities located at different positions along an environmental gradient for three model scenarios: CM without facilitation; CFM-U, a unimodal relationship between facilitation and environmental severity; and CFM-L, a positively linear relationship between facilitation and environmental severity. Our results demonstrated that facilitation could increase, decrease or have no remarkable effect on temporal turnover. The specific outcome depended on the location of the focal community across the environmental gradient and the model employed. Compared with CM, the inclusion of positive interactions (i.e. CFM-U and CFM-L), at intermediate environmental stress levels (such as S = 0.7 and 0.8) resulted in lower Bray-Curtis similarity values; at other severity levels, facilitation slowed down (such as S = 0.3 and 0.4 at low to medium stress levels, and S = 0.9 at high stress levels) or had only a subtle effect (such as at S = 0.1) on temporal turnover. We also found that the coefficient of variation (CV) in species abundances and the rate of temporal variability showed a significant quadratic relationship. Our theoretical analysis contributes to the understanding of factors driving temporal turnover in biotic communities, and presents a potential metric (i.e. CV in species abundances) assessing the consequences of ongoing environmental change on community structure.

  1. The Effect of Positive Interactions on Temporal Turnover of Community Composition along an Environmental Gradient

    PubMed Central

    Wang, Youshi; Yang, Zhiyong; Zhou, Shurong; Soininen, Janne; Ai, Dexiecuo; Li, Yali; Chu, Chengjin

    2013-01-01

    It has been demonstrated that the interplay between negative and positive interactions simultaneously shapes community structure and composition. However, few studies have attempted to examine the effect of facilitation on compositional changes in communities through time. Additionally, due to the difficulties in collecting the long-term data, it would be useful to indicate the rate of temporal turnover using a readily obtainable metric. Using an individual-based model incorporating plant strategies, we examined the role of facilitation on the temporal turnover of communities located at different positions along an environmental gradient for three model scenarios: CM without facilitation; CFM-U, a unimodal relationship between facilitation and environmental severity; and CFM-L, a positively linear relationship between facilitation and environmental severity. Our results demonstrated that facilitation could increase, decrease or have no remarkable effect on temporal turnover. The specific outcome depended on the location of the focal community across the environmental gradient and the model employed. Compared with CM, the inclusion of positive interactions (i.e. CFM-U and CFM-L), at intermediate environmental stress levels (such as S = 0.7 and 0.8) resulted in lower Bray-Curtis similarity values; at other severity levels, facilitation slowed down (such as S = 0.3 and 0.4 at low to medium stress levels, and S = 0.9 at high stress levels) or had only a subtle effect (such as at S = 0.1) on temporal turnover. We also found that the coefficient of variation (CV) in species abundances and the rate of temporal variability showed a significant quadratic relationship. Our theoretical analysis contributes to the understanding of factors driving temporal turnover in biotic communities, and presents a potential metric (i.e. CV in species abundances) assessing the consequences of ongoing environmental change on community structure. PMID:24265708

  2. Analysis of Non-Methane Hydrocarbon Data from 2004-2016 in a Subtropical Area close to the Gulf of Mexico

    NASA Astrophysics Data System (ADS)

    Rappenglueck, B.

    2017-12-01

    Speciated C2-C11 non-methane hydrocarbons (NMHC) have been measured online on an hourly basis at Lake Jackson/TX close to the Gulf of Mexico. Altogether 48 NMHCs along with NO, NO2, NOx, O3 have been collected continuously from January 2004-December 2016 under the auspices of the Texas Commission on Environmental Quality. Data was screened for background conditions representing marine wind sectors. The data set represents a combination of marine air masses mixed with local biogenic emissions. The data analysis addresses photochemical processing of air masses as reflected in the relationship of ln(n-butane/ethane) vs. ln(propane/ethane) and ln(i-butane/ethane) vs. ln(n-butane/ethane). In addition, key NMHC relationships for radical chemistry, e.g. i-butane vs n-butane for OH and Cl chemistry and i-pentane vs. n-pentane for NO3 chemistry, are discussed. Seasonal analysis revealed a clear trend with maximum NMHC mixing ratios in winter time and lowest mixing ratios in summer reflecting the impact of photochemical processes in summer. Propene equivalents were highest during summertime, with significant contributions from alkenes, including isoprene. The relation of propane/ethane vs ethane indicates seasonal variation with lowest values (i.e. most aged air masses) in winter.

  3. Environmental Baseline Survey Parcel E2, F, and I, Military Housing Areas Nellis Air Force Base, Nevada. Phase 1

    DTIC Science & Technology

    2011-09-01

    SEP 2011 2. REPORT TYPE N/A 3. DATES COVERED - 4. TITLE AND SUBTITLE Final Phase I Environmental Baseline Survey Parcel E2, F, and I...lead-based paint LUST leaking underground storage tank M.D.M. Mount Diablo Meridian MFH military family housing MHPI Military Housing...northwest OWS oil/water separator PADS PCB Activity Database PCB polychorinated biphenyl PCR Physical Condition Report PDF portable

  4. Phase 1 Environmental Baseline Survey Parcels E2, F, and I, Military Housing Areas, Nellis Air Force Base, Nevada

    DTIC Science & Technology

    2011-09-01

    21 SEP 2011 2. REPORT TYPE N/A 3. DATES COVERED 4. TITLE AND SUBTITLE Final Phase I Environmental Baseline Survey Parcels E2, F, and I...leaking underground storage tank M.D.M. Mount Diablo Meridian MFH military family housing MHPI Military Housing Privatization Initiative MSL...water separator PADS PCB Activity Database PCB polychorinated biphenyl PCR Physical Condition Report PDF portable document format PPV

  5. Strategic Defense Initiative Demonstration/Validation Program Environmental Assessment. Battle Management/Command and Control, and Communications (BM/C3),

    DTIC Science & Technology

    1987-08-01

    POR A ENVIOMNE. STRATEGIC DEFENSE INITRIEDNU T IATI V EI 1 0193 O RTEI ONE..()SRTGC DEFENSE INITIATV E S RATION V EO ORORNIZATION WASINZGTON DC...facilities where Demonstration/Validation activities are planned.- e Ten areas of environmental consideration are addressed: (1) air quality; (2) . water...air quality, rater quality, and hazardous vaste (63). 2.2 ELCTRONIC SYSTEMS DIVISION The Electronic Systems Division administrative offices are located

  6. Proteomic analysis of anti-nutritional factors (ANF’s) in soybean seeds as affected by environmental and genetic factors

    USDA-ARS?s Scientific Manuscript database

    The genotype (G), environment (E), and the relationship between G and E on soybean seed anti-nutritional factors (ANFs) were examined under three different agro-climatic conditions. The field trials were conducted at Maryland, South Carolina, and South Dakota using nine region specific genotypes. At...

  7. Quantitative PCR measurements of Escherichia coli including shiga toxin-producing E. coli (STEC) in animal feces and environmental waters.

    PubMed

    Ahmed, W; Gyawali, P; Toze, S

    2015-03-03

    Quantitative PCR (qPCR) assays were used to determine the concentrations of E. coli including shiga toxin-producing E. coli (STEC) associated virulence genes (eaeA, stx1, stx2, and hlyA) in ten animal species (fecal sources) and environmental water samples in Southeast Queensland, Australia. The mean Log10 concentrations and standard deviations of E. coli 23S rRNA across fecal sources ranged from 1.3 ± 0.1 (horse) to 6.3 ± 0.4 (cattle wastewater) gene copies at a test concentration of 10 ng of DNA. The differences in mean concentrations of E. coli 23S rRNA gene copies among fecal source samples were significantly different from each other (P < 0.0001). Among the virulence genes, stx2 (25%, 95% CI, 17-33%) was most prevalent among fecal sources, followed by eaeA (19%, 95% CI, 12-27%), stx1 (11%, 95% CI, 5%-17%) and hlyA (8%, 95% CI, 3-13%). The Log10 concentrations of STEC virulence genes in cattle wastewater samples ranged from 3.8 to 5.0 gene copies at a test concentration of 10 ng of DNA. Of the 18 environmental water samples tested, three (17%) were positive for eaeA and two (11%) samples were also positive for the stx2 virulence genes. The data presented in this study will aid in the estimation of quantitative microbial risk assessment (QMRA) from fecal pollution of domestic and wild animals in drinking/recreational water catchments.

  8. An environmentally friendly ball milling process for recovery of valuable metals from e-waste scraps.

    PubMed

    Zhang, Zhi-Yuan; Zhang, Fu-Shen; Yao, TianQi

    2017-10-01

    The present study reports a mechanochemical (MC) process for effective recovery of copper (Cu) and precious metals (i.e. Pd and Ag) from e-waste scraps. Results indicated that the mixture of K 2 S 2 O 8 and NaCl (abbreviated as K 2 S 2 O 8 /NaCl hereafter) was the most effective co-milling reagents in terms of high recovery rate. After co-milling with K 2 S 2 O 8 /NaCl, soluble metallic compounds were produced and consequently benefit the subsequent leaching process. 99.9% of Cu and 95.5% of Pd in the e-waste particles could be recovered in 0.5mol/L diluted HCl in 15min. Ag was concentrated in the leaching residue as AgCl and then recovered in 1mol/L NH 3 solution. XRD and XPS analysis indicated that elemental metals in the raw materials were transformed into their corresponding oxidation state during ball milling process at low temperature, implying that solid-solid phase reactions is the reaction mechanism. Based on the results and thermodynamic parameters of the probable reactions, possible reaction pathways during ball milling were proposed. Suggestion on category of e-waste for ball milling process was put forward according to the experiment results. The designed metal recovery process of this study has the advantages of highly recovery rate and quick leaching speed. Thus, this study offers a promising and environmentally friendly method for recovering valuable metals from e-waste. Copyright © 2017 Elsevier Ltd. All rights reserved.

  9. Benchmarking analysis of three multimedia models: RESRAD, MMSOILS, and MEPAS

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Cheng, J.J.; Faillace, E.R.; Gnanapragasam, E.K.

    1995-11-01

    Multimedia modelers from the United States Environmental Protection Agency (EPA) and the United States Department of Energy (DOE) collaborated to conduct a comprehensive and quantitative benchmarking analysis of three multimedia models. The three models-RESRAD (DOE), MMSOILS (EPA), and MEPAS (DOE)-represent analytically based tools that are used by the respective agencies for performing human exposure and health risk assessments. The study is performed by individuals who participate directly in the ongoing design, development, and application of the models. A list of physical/chemical/biological processes related to multimedia-based exposure and risk assessment is first presented as a basis for comparing the overall capabilitiesmore » of RESRAD, MMSOILS, and MEPAS. Model design, formulation, and function are then examined by applying the models to a series of hypothetical problems. Major components of the models (e.g., atmospheric, surface water, groundwater) are evaluated separately and then studied as part of an integrated system for the assessment of a multimedia release scenario to determine effects due to linking components of the models. Seven modeling scenarios are used in the conduct of this benchmarking study: (1) direct biosphere exposure, (2) direct release to the air, (3) direct release to the vadose zone, (4) direct release to the saturated zone, (5) direct release to surface water, (6) surface water hydrology, and (7) multimedia release. Study results show that the models differ with respect to (1) environmental processes included (i.e., model features) and (2) the mathematical formulation and assumptions related to the implementation of solutions (i.e., parameterization).« less

  10. Disease and Health Inequalities Attributable to Air Pollutant Exposure in Detroit, Michigan

    PubMed Central

    Milando, Chad W.; Williams, Guy O.; Batterman, Stuart A.

    2017-01-01

    The environmental burden of disease is the mortality and morbidity attributable to exposures of air pollution and other stressors. The inequality metrics used in cumulative impact and environmental justice studies can be incorporated into environmental burden studies to better understand the health disparities of ambient air pollutant exposures. This study examines the diseases and health disparities attributable to air pollutants for the Detroit urban area. We apportion this burden to various groups of emission sources and pollutants, and show how the burden is distributed among demographic and socioeconomic subgroups. The analysis uses spatially-resolved estimates of exposures, baseline health rates, age-stratified populations, and demographic characteristics that serve as proxies for increased vulnerability, e.g., race/ethnicity and income. Based on current levels, exposures to fine particulate matter (PM2.5), ozone (O3), sulfur dioxide (SO2), and nitrogen dioxide (NO2) are responsible for more than 10,000 disability-adjusted life years (DALYs) per year, causing an annual monetized health impact of $6.5 billion. This burden is mainly driven by PM2.5 and O3 exposures, which cause 660 premature deaths each year among the 945,000 individuals in the study area. NO2 exposures, largely from traffic, are important for respiratory outcomes among older adults and children with asthma, e.g., 46% of air-pollution related asthma hospitalizations are due to NO2 exposures. Based on quantitative inequality metrics, the greatest inequality of health burdens results from industrial and traffic emissions. These metrics also show disproportionate burdens among Hispanic/Latino populations due to industrial emissions, and among low income populations due to traffic emissions. Attributable health burdens are a function of exposures, susceptibility and vulnerability (e.g., baseline incidence rates), and population density. Because of these dependencies, inequality metrics should be calculated using the attributable health burden when feasible to avoid potentially underestimating inequality. Quantitative health impact and inequality analyses can inform health and environmental justice evaluations, providing important information to decision makers for prioritizing strategies to address exposures at the local level. PMID:29048385

  11. Outbreak of escherichia coli O157: H7 infections after Petting Zoo visits, North Carolina State Fair, October-November 2004.

    PubMed

    Goode, Brant; O'Reilly, Ciara; Dunn, John; Fullerton, Kathleen; Smith, Stacey; Ghneim, George; Keen, James; Durso, Lisa; Davies, Megan; Montgomery, Sue

    2009-01-01

    To identify cases, describe the outbreak, implement control measures, and identify factors associated with infection or protection from infection, including contact with animals and hand hygiene practices. Case finding, a case-control study of 45 cases and 188 controls, environmental investigation, and molecular subtyping of clinical and environmental Escherichia coli O157:H7 isolates. The 2004 North Carolina State Fair. Case patients were fair visitors who had laboratory-confirmed E coli O157 infections, hemolytic uremic syndrome (HUS) diagnoses, or bloody diarrheal illnesses. Control subjects were recruited from a randomized list of persons who had purchased fair tickets online. Environmental samples from the fairgrounds were obtained from locations that had held animals during the fair. Main Exposure Visiting a petting zoo. Case finding: Summary descriptive statistics of suspected, probable, or confirmed E coli O157:H7 infections, signs, symptoms, and HUS. Environmental investigation: E coli O157:H7 isolates, pulsed-field gel electrophoresis patterns, and spatial distribution of source locations. Case-control study: Odds ratios (ORs) comparing reported fair-related activities, hygiene practices, and zoonotic disease knowledge with outcome. A total of 108 case patients were ascertained, including 41 with laboratory-confirmed illness and 15 who experienced HUS. Forty-five case patients and 188 controls were enrolled in the case-control study. Visits to a petting zoo having substantial environmental E coli O157:H7 contamination were associated with illness (age-adjusted OR, 8.2; 95% confidence interval [CI], 3.3-20.3). Among children 5 years or younger who had visited the implicated petting zoo, contact with animal manure (OR, 6.9; 95% CI, 2.2-21.9) and hand-to-mouth behaviors (OR, 10.6; 95% CI, 2.0-55.0) were associated with illness. Reported hand hygiene practices did not differ significantly (OR, 1.8; 95% CI, 0.3-9.5). Reported awareness of the risk for zoonotic disease was protective (OR, 0.1; 95% CI, 0.03-0.5). Environmental samples from the petting zoo implicated in the case-control study yielded E coli O157:H7, with indistinguishable pulsed-field gel electrophoresis patterns from the predominant strain. We describe one of the largest petting zoo outbreaks of E coli O157:H7 to date. Persons became infected after contact with manure and engaging in hand-to-mouth behaviors in a petting zoo having substantial E coli O157:H7 contamination. Use of alcohol-based hand-sanitizing gels was not protective, although knowledge of the risk for zoonotic infection was protective. Future investigations in similar outbreaks should assess risks for infection and protective measures (eg, physical barriers separating visitors from animal manure, education, and appropriate hand hygiene practices).

  12. The YvqE two-component system controls biofilm formation and acid production in Streptococcus pyogenes.

    PubMed

    Isaka, Masanori; Tatsuno, Ichiro; Maeyama, Jun-Ichi; Matsui, Hideyuki; Zhang, Yan; Hasegawa, Tadao

    2016-07-01

    In Streptococcus pyogenes, proteins involved in determining virulence are controlled by stand-alone response regulators and by two-component regulatory systems. Previous studies reported that, compared to the parental strain, the yvqE sensor knockout strain showed significantly reduced growth and lower virulence. To determine the function of YvqE, we performed biofilm analysis and pH assays on yvqE mutants, and site-directed mutagenesis of YvqE. The yvqE deletion mutant showed a slower acid production rate, indicating that YvqE regulates acid production from sugar fermentation. The mutant strain, in which the Asp(26) residue in YvqE was replaced with Asn, affected biofilm formation, suggesting that this amino acid senses hydrogen ions produced by fermentative sugar metabolism. Signals received by YvqE were directly or indirectly responsible for inducing pilus expression. This study shows that at low environmental pH, biofilm formation in S. pyogenes is mediated by YvqE and suggests that regulation of pilus expression by environmental acidification could be directly under the control of YvqE. © 2016 APMIS. Published by John Wiley & Sons Ltd.

  13. 32 CFR 651.3 - Explanation of abbreviations and terms.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... 32 National Defense 4 2010-07-01 2010-07-01 true Explanation of abbreviations and terms. 651.3 Section 651.3 National Defense Department of Defense (Continued) DEPARTMENT OF THE ARMY (CONTINUED) ENVIRONMENTAL QUALITY ENVIRONMENTAL ANALYSIS OF ARMY ACTIONS (AR 200-2) Introduction § 651.3 Explanation of...

  14. Divergent predictions of carbon storage between two global land models: attribution of the causes through traceability analysis

    NASA Astrophysics Data System (ADS)

    Rafique, Rashid; Xia, Jianyang; Hararuk, Oleksandra; Asrar, Ghassem R.; Leng, Guoyong; Wang, Yingping; Luo, Yiqi

    2016-07-01

    Representations of the terrestrial carbon cycle in land models are becoming increasingly complex. It is crucial to develop approaches for critical assessment of the complex model properties in order to understand key factors contributing to models' performance. In this study, we applied a traceability analysis which decomposes carbon cycle models into traceable components, for two global land models (CABLE and CLM-CASA') to diagnose the causes of their differences in simulating ecosystem carbon storage capacity. Driven with similar forcing data, CLM-CASA' predicted ˜ 31 % larger carbon storage capacity than CABLE. Since ecosystem carbon storage capacity is a product of net primary productivity (NPP) and ecosystem residence time (τE), the predicted difference in the storage capacity between the two models results from differences in either NPP or τE or both. Our analysis showed that CLM-CASA' simulated 37 % higher NPP than CABLE. On the other hand, τE, which was a function of the baseline carbon residence time (τ'E) and environmental effect on carbon residence time, was on average 11 years longer in CABLE than CLM-CASA'. This difference in τE was mainly caused by longer τ'E of woody biomass (23 vs. 14 years in CLM-CASA'), and higher proportion of NPP allocated to woody biomass (23 vs. 16 %). Differences in environmental effects on carbon residence times had smaller influences on differences in ecosystem carbon storage capacities compared to differences in NPP and τ'E. Overall, the traceability analysis showed that the major causes of different carbon storage estimations were found to be parameters setting related to carbon input and baseline carbon residence times between two models.

  15. Divergent predictions of carbon storage between two global land models: Attribution of the causes through traceability analysis

    DOE PAGES

    Rafique, Rashid; Xia, Jianyang; Hararuk, Oleksandra; ...

    2016-07-29

    Representations of the terrestrial carbon cycle in land models are becoming increasingly complex. It is crucial to develop approaches for critical assessment of the complex model properties in order to understand key factors contributing to models' performance. In this study, we applied a traceability analysis which decomposes carbon cycle models into traceable components, for two global land models (CABLE and CLM-CASA') to diagnose the causes of their differences in simulating ecosystem carbon storage capacity. Driven with similar forcing data, CLM-CASA' predicted – 31 % larger carbon storage capacity than CABLE. Since ecosystem carbon storage capacity is a product of net primary productivitymore » (NPP) and ecosystem residence time ( τ E), the predicted difference in the storage capacity between the two models results from differences in either NPP or τ E or both. Our analysis showed that CLM-CASA'simulated 37 % higher NPP than CABLE. On the other hand, τ E, which was a function of the baseline carbon residence time ( τ' E) and environmental effect on carbon residence time, was on average 11 years longer in CABLE than CLM-CASA'. This difference in τ E was mainly caused by longer τ' E of woody biomass (23 vs. 14 years in CLM-CASA'), and higher proportion of NPP allocated to woody biomass (23 vs. 16 %). Differences in environmental effects on carbon residence times had smaller influences on differences in ecosystem carbon storage capacities compared to differences in NPP and τ' E. Altogether, the traceability analysis showed that the major causes of different carbon storage estimations were found to be parameters setting related to carbon input and baseline carbon residence times between two models.« less

  16. Divergent predictions of carbon storage between two global land models: Attribution of the causes through traceability analysis

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Rafique, Rashid; Xia, Jianyang; Hararuk, Oleksandra

    Representations of the terrestrial carbon cycle in land models are becoming increasingly complex. It is crucial to develop approaches for critical assessment of the complex model properties in order to understand key factors contributing to models' performance. In this study, we applied a traceability analysis which decomposes carbon cycle models into traceable components, for two global land models (CABLE and CLM-CASA') to diagnose the causes of their differences in simulating ecosystem carbon storage capacity. Driven with similar forcing data, CLM-CASA' predicted – 31 % larger carbon storage capacity than CABLE. Since ecosystem carbon storage capacity is a product of net primary productivitymore » (NPP) and ecosystem residence time ( τ E), the predicted difference in the storage capacity between the two models results from differences in either NPP or τ E or both. Our analysis showed that CLM-CASA'simulated 37 % higher NPP than CABLE. On the other hand, τ E, which was a function of the baseline carbon residence time ( τ' E) and environmental effect on carbon residence time, was on average 11 years longer in CABLE than CLM-CASA'. This difference in τ E was mainly caused by longer τ' E of woody biomass (23 vs. 14 years in CLM-CASA'), and higher proportion of NPP allocated to woody biomass (23 vs. 16 %). Differences in environmental effects on carbon residence times had smaller influences on differences in ecosystem carbon storage capacities compared to differences in NPP and τ' E. Altogether, the traceability analysis showed that the major causes of different carbon storage estimations were found to be parameters setting related to carbon input and baseline carbon residence times between two models.« less

  17. Observation of cosmic-ray anisotropy in the decade below 1 PeV with a pentagon array

    NASA Astrophysics Data System (ADS)

    Moghaddam, S. Mortazavi; Bahmanabadi, M.

    2018-03-01

    The study of the anisotropy of the arrival directions is an essential tool to investigate the origin and propagation of cosmic rays primaries. A pentagon array has been designed to collect data around the knee region of cosmic ray spectrum. The experimental results of this array obtained from October 2016 to October 2017. During this period, more than 5.3 ×105 extensive air shower events at energies in the decade below 1 PeV has been accumulated by this array at Sharif University of Technology in Tehran (3 5 ° 4 3'N , 5 1 ° 2 0'E , 1200m a .s .l =890 g cm-2 ). In analyzing the data set, we have used appropriate techniques of analysis and considered environmental effects. We report the analysis of the sidereal anisotropy of Galactic cosmic rays (GCRs). In this analysis, in addition to the Compton- Getting effect due to the motion of the earth in the Galaxy, an anisotropy has been observed which is due to a unidirectional anisotropy of cosmic ray flow along the Galactic arms.

  18. The Onset of a Novel Environmental Offset: A case study for diverse pollutant scheme in Australia.

    NASA Astrophysics Data System (ADS)

    Sengupta, A.; Arora, M.; Delbridge, N.; Pettigrove, V.; Feldman, D.

    2014-12-01

    Environmental offset schemes employ a crediting system to mitigate the impacts of pollutants. In this talk, we present a novel trade-off concept comparing diverse groups of pollutants: environmental flows, micropollutants (heavy metals, pesticides, estrogen compounds) and nutrients in a test watershed (Jacksons Creek), in the vicinity of Melbourne. A reservoir in the upper watershed, and a wastewater treatment plant (WTP) are the main sources of flow into Jacksons Creek. The current land use is a mix of agriculture, and rural, though rapid urbanization is anticipated with a 40% increase in the population by 2040. The creek is impacted by: 1) low flow, especially during dry periods (contribution from the reservoir drops dramatically), 2) nutrient enrichment (WTP and agricultural runoff), and 3) micropollutants-heavy metals (urban runoff), estrogenic compounds (WTP), and pesticides (agricultural runoff). In this offset framework, we evaluated current and future scenarios to identify the main stressor in Jacksons Creek. We collected monitoring data at 15 sites for separate 3 events. Then we developed a watershed model to assess sources of pollutant loads to the creek, using two different tools, Model for Urban Stormwater Improvement Conceptualisation (MUSIC) for the preliminary flow and water quality modeling, and eWater Source for integrated water resource management (IWRM), and a decision support system for stakeholders. Scenario analysis includes urbanization and population growth, and anticipated discharges from WTP and the reservoir. Measured nutrient concentrations were high for all sampling events. Micropollutants were detected at a concentration higher than the trigger value at several locations. Preliminary analysis shows that low flow is one of the major stressors in the creek causing elevated micropollutant and nutrient concentrations (non-point), and that discharge from the WTP is essential to maintain the minimum environmental flows, though nutrient enrichment downstream could occur. This study demonstrates an innovative case for evaluating net environmental benefits, and might hold important lessons for the design of offset schemes in comparable environments elsewhere.

  19. 40 CFR 1400.3 - Public access to paper copies of off-site consequence analysis information.

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ...-site consequence analysis information. 1400.3 Section 1400.3 Protection of Environment ENVIRONMENTAL... INFORMATION DISTRIBUTION OF OFF-SITE CONSEQUENCE ANALYSIS INFORMATION Public Access § 1400.3 Public access to paper copies of off-site consequence analysis information. (a) General. The Administrator and the...

  20. 40 CFR 1400.3 - Public access to paper copies of off-site consequence analysis information.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ...-site consequence analysis information. 1400.3 Section 1400.3 Protection of Environment ENVIRONMENTAL... INFORMATION DISTRIBUTION OF OFF-SITE CONSEQUENCE ANALYSIS INFORMATION Public Access § 1400.3 Public access to paper copies of off-site consequence analysis information. (a) General. The Administrator and the...

  1. 40 CFR 1400.3 - Public access to paper copies of off-site consequence analysis information.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ...-site consequence analysis information. 1400.3 Section 1400.3 Protection of Environment ENVIRONMENTAL... INFORMATION DISTRIBUTION OF OFF-SITE CONSEQUENCE ANALYSIS INFORMATION Public Access § 1400.3 Public access to paper copies of off-site consequence analysis information. (a) General. The Administrator and the...

  2. 40 CFR 1400.3 - Public access to paper copies of off-site consequence analysis information.

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ...-site consequence analysis information. 1400.3 Section 1400.3 Protection of Environment ENVIRONMENTAL... INFORMATION DISTRIBUTION OF OFF-SITE CONSEQUENCE ANALYSIS INFORMATION Public Access § 1400.3 Public access to paper copies of off-site consequence analysis information. (a) General. The Administrator and the...

  3. Do Methodological Choices in Environmental Modeling Bias Rebound Effects? A Case Study on Electric Cars.

    PubMed

    Font Vivanco, David; Tukker, Arnold; Kemp, René

    2016-10-18

    Improvements in resource efficiency often underperform because of rebound effects. Calculations of the size of rebound effects are subject to various types of bias, among which methodological choices have received particular attention. Modellers have primarily focused on choices related to changes in demand, however, choices related to modeling the environmental burdens from such changes have received less attention. In this study, we analyze choices in the environmental assessment methods (life cycle assessment (LCA) and hybrid LCA) and environmental input-output databases (E3IOT, Exiobase and WIOD) used as a source of bias. The analysis is done for a case study on battery electric and hydrogen cars in Europe. The results describe moderate rebound effects for both technologies in the short term. Additionally, long-run scenarios are calculated by simulating the total cost of ownership, which describe notable rebound effect sizes-from 26 to 59% and from 18 to 28%, respectively, depending on the methodological choices-with favorable economic conditions. Relevant sources of bias are found to be related to incomplete background systems, technology assumptions and sectorial aggregation. These findings highlight the importance of the method setup and of sensitivity analyses of choices related to environmental modeling in rebound effect assessments.

  4. Critical considerations for the application of environmental DNA methods to detect aquatic species

    USGS Publications Warehouse

    Goldberg, Caren S.; Turner, Cameron R.; Deiner, Kristy; Klymus, Katy E.; Thomsen, Philip Francis; Murphy, Melanie A.; Spear, Stephen F.; McKee, Anna; Oyler-McCance, Sara J.; Cornman, Robert S.; Laramie, Matthew B.; Mahon, Andrew R.; Lance, Richard F.; Pilliod, David S.; Strickler, Katherine M.; Waits, Lisette P.; Fremier, Alexander K.; Takahara, Teruhiko; Herder, Jelger E.; Taberlet, Pierre

    2016-01-01

    Species detection using environmental DNA (eDNA) has tremendous potential for contributing to the understanding of the ecology and conservation of aquatic species. Detecting species using eDNA methods, rather than directly sampling the organisms, can reduce impacts on sensitive species and increase the power of field surveys for rare and elusive species. The sensitivity of eDNA methods, however, requires a heightened awareness and attention to quality assurance and quality control protocols. Additionally, the interpretation of eDNA data demands careful consideration of multiple factors. As eDNA methods have grown in application, diverse approaches have been implemented to address these issues. With interest in eDNA continuing to expand, supportive guidelines for undertaking eDNA studies are greatly needed.Environmental DNA researchers from around the world have collaborated to produce this set of guidelines and considerations for implementing eDNA methods to detect aquatic macroorganisms.Critical considerations for study design include preventing contamination in the field and the laboratory, choosing appropriate sample analysis methods, validating assays, testing for sample inhibition and following minimum reporting guidelines. Critical considerations for inference include temporal and spatial processes, limits of correlation of eDNA with abundance, uncertainty of positive and negative results, and potential sources of allochthonous DNA.We present a synthesis of knowledge at this stage for application of this new and powerful detection method.

  5. Human posture experiments under water: ways of applying the findings to microgravity

    NASA Astrophysics Data System (ADS)

    Dirlich, Thomas

    For the design and layout human spacecraft interiors the Neutral Body Posture (NBP) in micro-gravity is of great importance. The NBP has been defined as the stable, replicable and nearly constant posture the body "automatically" assumes when a human relaxes in microgravity. Furthermore the NBP, as published, suggests that there is one standard neutral posture for all individuals. Published experiments from space, parabolic flights and under water on the other hand show strong inter-individual variations of neutral (relaxed) postures. This might originate from the quite small sample sizes of subjects analyzed or the different experiment conditions, e. g. space and under water. Since 2008 a collaborative research project focussing on human postures and motions in microgravity has been ongoing at the Technische Univer-sitüt München (TUM). This collaborative effort is undertaken by the Institute of Astronautics a (LRT) and the Institute of Ergonomics (LfE). Several test campaigns have been conducted in simulated microgravity under water using a specially designed standardized experiment setup. Stereo-metric HD video footage and anthropometric data from over 50 subjects (female and male) has been gathered in over 80 experiments. The video data is analyzed using PCMAN software, developed by the LfE, resulting in a 3D volumetric CAD-based model of each subject and posture. Preliminary and ongoing analysis of the data offer evidence for the existence of intra-individually constant neutral postures, as well as continuously recurring relaxation strate-gies. But as with the data published prior the TUM experiments show quite a large variation of inter-individual postures. These variation might be induced or influenced by the special environmental conditions in the underwater experiment. Thus in present paper ways of stan-dardizing data and applying the findings gathered under water to real microgravity are being discussed. The following influences stemming from the differences between underwater and real microgravity environment were analyzed in greater detail: external forces (buoyancy and grav-ity), required fixation, postural changes by breathing and subject orientation to gravitational vector. Goal of this analysis was to understand the respective effects of each environmental influence on subjects posture observed. Each of the different influences was then quantified and the postural change induced by it calculated. These were then combined using a specially programmed multi-body-simulation tool, making it possible to recompute 3D posture data dy-namically to the environmental influences. The simulation is based on the volumetric 3D model of each subject, specific anthropometric data, such as body-fat or muscle ratio, combined with external forces such as gravity and buoyancy. The recomputed data can then be compared independent from the environmental influences. The recomputed 3D posture data can then be re-evaluated focussing again on possible inter-personal neutral posture archetypes in the subject group. Some examples of recomputed data and inter-personal findings will be given.

  6. E-SMART system for in-situ detection of environmental contaminants. Quarterly technical progress report, April--June 1997

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    NONE

    1997-08-01

    General Atomics (GA) leads a team of industrial, academic, and government organizations in the development of the Environmental Systems Management, Analysis and Reporting neTwork (E-SMART) for the Defense Advanced Research Project Agency (DARPA), by way of this Technology Reinvestment Project (TRP). E-SMART defines a standard by which networks of smart sensing, sampling, and control devices can interoperate. E-SMART is intended to be an open standard, available to any equipment manufacturer. The user will be provided a standard platform on which a site-specific monitoring plan can be implemented using sensors and actuators from various manufacturers and upgraded as new monitoring devicesmore » become commercially available. This project will further develop and advance the E-SMART standardized network protocol to include new sensors, sampling systems, and graphical user interfaces.« less

  7. Rumours about wildlife pest introductions: European rabbits in Spain.

    PubMed

    Delibes-Mateos, Miguel

    2017-03-01

    Rumours associated with wildlife are frequent, although they have received little attention in the scientific literature. Studying rumours is important because of their relevance not only in a broad theoretical sense but also in environmental management. The goal of this study is to explore the complexity of the relationships between humans and wildlife through a thematic analysis of rumours associated with allegedly introduced European rabbits (Oryctolagus cuniculus) that cause crop damage in Spain. For this purpose, potential rumours were identified using the Google search engine. Data analysis consisted of reading and re-reading Web-based texts to identify main themes, ideas and topics with the assistance of NVivo 10 software. The analysis identified three main themes: (1) the reviewed websites referred to allegedly introduced rabbits which differed from native rabbits; (2) differences were based on alleged observations of unnatural behaviour, physiology or physical appearance of introduced rabbits; (3) rumours were frequently used in the context of the rabbit management conflict; e.g. farmers accused hunters of releasing harmful rabbits. This study suggests that the analysis of wildlife-release rumours sheds light on the position of parties involved in conflicts associated with the (alleged) introduction of wildlife species. It stresses the importance of rumours in conservation and environmental management, and opens the door to future research.

  8. The Litho-Density tool calibration

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Ellis, D.; Flaum, C.; Marienbach, E.

    1983-10-01

    The Litho-Density tool (LDT) uses a gamma ray source and two NaI scintillator detectors for borehole measurement of electron density, p/SUB e/, and a quantity, P/SUB e/, which is related to the photoelectric cross section at 60 keV and therefore to the lithology of the formation. An active stabilization system controls the gains of the two detectors which permits selective gamma-ray detection. Spectral analysis is performed in the near detector (2 energy windows) and in the detector farther away from the source (3 energy windows). This paper describes the results of laboratory measurements undertaken to define the basic tool response.more » The tool is shown to provide reliable measurements of formation density and lithology under a variety of environmental conditions.« less

  9. Alternative Green Solvents Project

    NASA Technical Reports Server (NTRS)

    Maloney, Phillip R.

    2012-01-01

    Necessary for safe and proper functioning of equipment. Mainly halogenated solvents. Tetrachloride, Trichloroethylene (TCE), CFC-113. No longer used due to regulatory/safety concerns. Precision Cleaning at KSC: Small % of total parts. Used for liquid oxygen (LOX) systems. Dual solvent process. Vertrel MCA (decafluoropentane (DFP) and trons-dichloroethylene) HFE-7100. DFP has long term environmental concerns. Project Goals: a) Identify potential replacements. b) 22 wet chemical processes. c) 3 alternative processes. d) Develop test procedures. e) Contamination and cleaning. f) Analysis. g) Use results to recommend alternative processes. Conclusions: a) No alternative matched Vertrel in this study. b) No clear second place solvent. c) Hydrocarbons- easy; Fluorinated greases- difficult. d) Fluorinated component may be needed in replacement solvent. e) Process may need to make up for shortcoming of the solvent. f) Plasma and SCC02 warrant further testing.

  10. Environmentally Induced Transgenerational Epigenetic Reprogramming of Primordial Germ Cells and the Subsequent Germ Line

    PubMed Central

    Skinner, Michael K.; Haque, Carlos Guerrero-Bosagna M.; Nilsson, Eric; Bhandari, Ramji; McCarrey, John R.

    2013-01-01

    A number of environmental factors (e.g. toxicants) have been shown to promote the epigenetic transgenerational inheritance of disease and phenotypic variation. Transgenerational inheritance requires the germline transmission of altered epigenetic information between generations in the absence of direct environmental exposures. The primary periods for epigenetic programming of the germ line are those associated with primordial germ cell development and subsequent fetal germline development. The current study examined the actions of an agricultural fungicide vinclozolin on gestating female (F0 generation) progeny in regards to the primordial germ cell (PGC) epigenetic reprogramming of the F3 generation (i.e. great-grandchildren). The F3 generation germline transcriptome and epigenome (DNA methylation) were altered transgenerationally. Interestingly, disruptions in DNA methylation patterns and altered transcriptomes were distinct between germ cells at the onset of gonadal sex determination at embryonic day 13 (E13) and after cord formation in the testis at embryonic day 16 (E16). A larger number of DNA methylation abnormalities (epimutations) and transcriptional alterations were observed in the E13 germ cells than in the E16 germ cells. These observations indicate that altered transgenerational epigenetic reprogramming and function of the male germline is a component of vinclozolin induced epigenetic transgenerational inheritance of disease. Insights into the molecular control of germline transmitted epigenetic inheritance are provided. PMID:23869203

  11. E-waste scenario in India, its management and implications.

    PubMed

    Wath, Sushant B; Dutt, P S; Chakrabarti, T

    2011-01-01

    Electronic waste or E-waste comprises of old, end-of-life electronic appliances such as computers, laptops, TVs, DVD players, refrigerators, freezers, mobile phones, MP3 players, etc., which have been disposed of by their original users. E-waste contains many hazardous constituents that may negatively impact the environment and affect human health if not properly managed. Various organizations, bodies, and governments of many countries have adopted and/or developed the environmentally sound options and strategies for E-waste management to tackle the ever growing threat of E-waste to the environment and human health. This paper presents E-waste composition, categorization, Global and Indian E-waste scenarios, prospects of recoverable, recyclable, and hazardous materials found in the E-waste, Best Available Practices, recycling, and recovery processes followed, and their environmental and occupational hazards. Based on the discussion, various challenges for E-waste management particularly in India are delineated, and needed policy interventions were discussed.

  12. A Methodology for the Analysis and Design of Human Information Processing Organizations.

    DTIC Science & Technology

    1985-09-01

    e f where 1q3 fs’lt d T 21 + f a Tp2 lo-A.1 q2 f m0 T p2 ( td Eq.(A.11) is derived from Pew [29], who has suggested that if accuracy is measured...environmental characteristics are of interest for the detection task, however. From the organization’s point of view the quantities vo and Td are subject...from the design problem statement is that the nominal design should be insensitive to variations in To and Td " The solution to Problem DR in the present

  13. Generational comparisons (F1 versus F3) of vinclozolin induced epigenetic transgenerational inheritance of sperm differential DNA methylation regions (epimutations) using MeDIP-Seq.

    PubMed

    Beck, Daniel; Sadler-Riggleman, Ingrid; Skinner, Michael K

    2017-07-01

    Environmentally induced epigenetic transgenerational inheritance of disease and phenotypic variation has been shown to involve DNA methylation alterations in the germline (e.g. sperm). These differential DNA methylation regions (DMRs) are termed epimutations and in part transmit the transgenerational phenotypes. The agricultural fungicide vinclozolin exposure of a gestating female rat has previously been shown to promote transgenerational disease and epimutations in F3 generation (great-grand-offspring) animals. The current study was designed to investigate the actions of direct fetal exposure on the F1 generation rat sperm DMRs compared to the F3 transgenerational sperm DMRs. A protocol involving methylated DNA immunoprecipitation (MeDIP) followed by next-generation sequencing (Seq) was used in the current study. Bioinformatics analysis of the MeDIP-Seq data was developed and several different variations in the bioinformatic analysis were evaluated. Observations indicate needs to be considered. Interestingly, the F1 generation DMRs were found to be fewer in number and for the most part distinct from the F3 generation epimutations. Observations suggest the direct exposure induced F1 generation sperm DMRs appear to promote in subsequent generations alterations in the germ cell developmental programming that leads to the distinct epimutations in the F3 generation. This may help explain the differences in disease and phenotypes between the direct exposure F1 generation and transgenerational F3 generation. Observations demonstrate a distinction between the direct exposure versus transgenerational epigenetic programming induced by environmental exposures and provide insights into the molecular mechanisms involved in the epigenetic transgenerational inheritance phenomenon.

  14. Occurrence of foodborne bacteria in Alberta feedlots.

    PubMed

    Van Donkersgoed, Joyce; Bohaychuk, Valerie; Besser, Thomas; Song, Xin-Ming; Wagner, Bruce; Hancock, Dale; Renter, David; Dargatz, David

    2009-02-01

    The occurrence of generic Escherichia coli, E. coli O157, Salmonella, and Campylobacter in cattle manure, beef carcasses, catch basin water, and soils receiving manure application was determined in 21 Alberta feedlots. In cattle manure, generic E. coli (98%, 2069/2100) and Campylobacter (76%, 1590/2100) were frequently detected; E. coli O157 (7%, 143/2100) and Salmonella (1%, 20/2100) were less frequently detected. Samples from beef carcasses in the cooler following Hazard Analysis Critical Control Point interventions yielded only 1 isolate each of generic E. coli and Campylobacter (1/1653) and no Salmonella (0/1653). Catch basin water specimens were positive for generic E. coli in both the spring (62%, 13/21) and the fall (52%, 11/21). Other bacteria were detected only in the spring water specimens, including E. coli O157 (29%, 6/21), Salmonella (5%, 1/21), and Campylobacter (52%, 11/21). Generic E. coli was frequently isolated from soil specimens (30%, 27/88), but E. coli O157 was not found in soil samples obtained in the spring and was only occasionally detected in the fall samples (9%, 3/32). Salmonella were occasionally found in the soil specimens collected in the spring (3%, 2/56), but not in the fall season (0/32). Campylobacter jejuni was frequent in cattle manure (66%, 1070/1623), but rare in carcass and environmental samples. E. coli O157 and Salmonella were rarely detected in cattle or the environment. Generic E. coli and Salmonella were rarely detected on carcasses.

  15. Guidelines for environmental infection control in health-care facilities. Recommendations of CDC and the Healthcare Infection Control Practices Advisory Committee (HICPAC).

    PubMed

    Sehulster, Lynne; Chinn, Raymond Y W

    2003-06-06

    The health-care facility environment is rarely implicated in disease transmission, except among patients who are immunocompromised. Nonetheless, inadvertent exposures to environmental pathogens (e.g., Aspergillus spp. and Legionella spp.) or airborne pathogens (e.g., Mycobacterium tuberculosis and varicella-zoster virus) can result in adverse patient outcomes and cause illness among health-care workers. Environmental infection-control strategies and engineering controls can effectively prevent these infections. The incidence of health-care--associated infections and pseudo-outbreaks can be minimized by 1) appropriate use of cleaners and disinfectants; 2) appropriate maintenance of medical equipment (e.g., automated endoscope reprocessors or hydrotherapy equipment); 3) adherence to water-quality standards for hemodialysis, and to ventilation standards for specialized care environments (e.g., airborne infection isolation rooms, protective environments, or operating rooms); and 4) prompt management of water intrusion into the facility. Routine environmental sampling is not usually advised, except for water quality determinations in hemodialysis settings and other situations where sampling is directed by epidemiologic principles, and results can be applied directly to infection-control decisions. This report reviews previous guidelines and strategies for preventing environment-associated infections in health-care facilities and offers recommendations. These include 1) evidence-based recommendations supported by studies; 2) requirements of federal agencies (e.g., Food and Drug Administration, U.S. Environmental Protection Agency, U.S. Department of Labor, Occupational Safety and Health Administration, and U.S. Department of Justice); 3) guidelines and standards from building and equipment professional organizations (e.g., American Institute of Architects, Association for the Advancement of Medical Instrumentation, and American Society of Heating, Refrigeration, and Air-Conditioning Engineers); 4) recommendations derived from scientific theory or rationale; and 5) experienced opinions based upon infection-control and engineering practices. The report also suggests a series of performance measurements as a means to evaluate infection-control efforts.

  16. Solid phase microextraction-high performance liquid chromatographic determination of octahydro-1,3,5,7-tetranitro-1,3,5,7-tetrazocine (HMX) and hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) in the presence of sodium dodecyl sulfate surfactant.

    PubMed

    Malik, Ashok Kumar; Rai, Parmod Kumar

    2008-07-01

    A simple and sensitive method has been developed using preconcentration technique solid phase microextraction (SPME) and analytical technique HPLC-UV for the determination of octahydro-1,3,5,7-tetranitro-1,3,5,7-tetrazocine (HMX) and hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) from the environmental samples. Aqueous solution of anionic surfactant SDS was used for the extraction of both nitramine high explosives, viz., HMX and RDX from soil samples which were subsequently sorbed on SPME fiber. The static desorption was carried out in the desorption chamber of the SPME-HPLC interface in the presence of mobile phase ACN/methanol/water (30:35:35) and the subsequent chromatographic analysis at a flow rate of 0.5 mL/min and detection at 230 nm. For this purpose, a C(18), 5 microm RP analytical column was used as a separation medium in this method. Several parameters relating to SPME, e.g., adsorption/desorption time, concentration of salt, stirring rate, etc., were optimized. The method was linear over the range of 20-400 ng/mL for HMX and RDX standards in the presence of surfactant in aqueous phase, respectively. The correlation coefficient (R(2)) for HMX and RDX are 0.9998 and 0.9982, respectively. With SPME, the detection limits (S/N = 3) in ng/mL are 0.05 and 0.1 for HMX and RDX, respectively in the presence of the SDS surfactant. The developed method has been applied successfully to the analysis of real environmental samples like bore well water, river water, and ground alluvial soil.

  17. Environmental DNA for wildlife biology and biodiversity monitoring.

    PubMed

    Bohmann, Kristine; Evans, Alice; Gilbert, M Thomas P; Carvalho, Gary R; Creer, Simon; Knapp, Michael; Yu, Douglas W; de Bruyn, Mark

    2014-06-01

    Extraction and identification of DNA from an environmental sample has proven noteworthy recently in detecting and monitoring not only common species, but also those that are endangered, invasive, or elusive. Particular attributes of so-called environmental DNA (eDNA) analysis render it a potent tool for elucidating mechanistic insights in ecological and evolutionary processes. Foremost among these is an improved ability to explore ecosystem-level processes, the generation of quantitative indices for analyses of species, community diversity, and dynamics, and novel opportunities through the use of time-serial samples and unprecedented sensitivity for detecting rare or difficult-to-sample taxa. Although technical challenges remain, here we examine the current frontiers of eDNA, outline key aspects requiring improvement, and suggest future developments and innovations for research. Copyright © 2014 Elsevier Ltd. All rights reserved.

  18. Final Environmental Assessment for Shared Use Paths (SUP), Eglin Air Force Base, Florida

    DTIC Science & Technology

    2011-07-01

    NEPA; 40 Code of Federal Regulations [CFR] 1500-1508); the USAF environmental impact analysis process as effectuated by 32 CFR Part 989; and DoD...alternatives were considered, but not carried forward for analysis . Alternative B This alternative would consist of constructing a 10’ wide SUP...EA Section 2.3.1, page 12) No-Action Alternative This alternative also was carried forward for analysis . (EA Section 2.4.1, page 16) ENVIRONMENTAL

  19. Insulation Cork Boards-Environmental Life Cycle Assessment of an Organic Construction Material.

    PubMed

    Silvestre, José D; Pargana, Nuno; de Brito, Jorge; Pinheiro, Manuel D; Durão, Vera

    2016-05-20

    Envelope insulation is a relevant technical solution to cut energy consumption and reduce environmental impacts in buildings. Insulation Cork Boards (ICB) are a natural thermal insulation material whose production promotes the recycling of agricultural waste. The aim of this paper is to determine and evaluate the environmental impacts of the production, use, and end-of-life processing of ICB. A "cradle-to-cradle" environmental Life Cycle Assessment (LCA) was performed according to International LCA standards and the European standards on the environmental evaluation of buildings. These results were based on site-specific data and resulted from a consistent methodology, fully described in the paper for each life cycle stage: Cork oak tree growth, ICB production, and end-of-life processing-modeling of the carbon flows ( i.e. , uptakes and emissions), including sensitivity analysis of this procedure; at the production stage-the modeling of energy processes and a sensitivity analysis of the allocation procedures; during building operation-the expected service life of ICB; an analysis concerning the need to consider the thermal diffusivity of ICB in the comparison of the performance of insulation materials. This paper presents the up-to-date "cradle-to-cradle" environmental performance of ICB for the environmental categories and life-cycle stages defined in European standards.

  20. Insulation Cork Boards—Environmental Life Cycle Assessment of an Organic Construction Material

    PubMed Central

    Silvestre, José D.; Pargana, Nuno; de Brito, Jorge; Pinheiro, Manuel D.; Durão, Vera

    2016-01-01

    Envelope insulation is a relevant technical solution to cut energy consumption and reduce environmental impacts in buildings. Insulation Cork Boards (ICB) are a natural thermal insulation material whose production promotes the recycling of agricultural waste. The aim of this paper is to determine and evaluate the environmental impacts of the production, use, and end-of-life processing of ICB. A “cradle-to-cradle” environmental Life Cycle Assessment (LCA) was performed according to International LCA standards and the European standards on the environmental evaluation of buildings. These results were based on site-specific data and resulted from a consistent methodology, fully described in the paper for each life cycle stage: Cork oak tree growth, ICB production, and end-of-life processing-modeling of the carbon flows (i.e., uptakes and emissions), including sensitivity analysis of this procedure; at the production stage—the modeling of energy processes and a sensitivity analysis of the allocation procedures; during building operation—the expected service life of ICB; an analysis concerning the need to consider the thermal diffusivity of ICB in the comparison of the performance of insulation materials. This paper presents the up-to-date “cradle-to-cradle” environmental performance of ICB for the environmental categories and life-cycle stages defined in European standards. PMID:28773516

  1. Environmental Durability of Adhesively Bonded Joints

    DTIC Science & Technology

    1997-10-14

    REPORT DOCUMENTATION PAGE Form Approved OMB No. 07040188 Public reporting burden for tis collection of information isestimated to average 1 hour per...transmittance and reflectance spectroscopy was performed using Nicolet’s OMNIC software for the set-up, control, and analysis of spectroscopic scans... publications inciudc: JAhIN’. W S. iind Butjkus, L.M., "Considetring E~nvironmental Condjitions ill the Design ()’ Bonded Structures: A Fracture

  2. Genotype by environment (climate) interaction improves genomic prediction for production traits in US Holstein cattle.

    PubMed

    Tiezzi, F; de Los Campos, G; Parker Gaddis, K L; Maltecca, C

    2017-03-01

    Genotype by environment interaction (G × E) in dairy cattle productive traits has been shown to exist, but current genetic evaluation methods do not take this component into account. As several environmental descriptors (e.g., climate, farming system) are known to vary within the United States, not accounting for the G × E could lead to reranking of bulls and loss in genetic gain. Using test-day records on milk yield, somatic cell score, fat, and protein percentage from all over the United States, we computed within herd-year-season daughter yield deviations for 1,087 Holstein bulls and regressed them on genetic and environmental information to estimate variance components and to assess prediction accuracy. Genomic information was obtained from a 50k SNP marker panel. Environmental effect inputs included herd (160 levels), geographical region (7 levels), geographical location (2 variables), climate information (7 variables), and management conditions of the herds (16 total variables divided in 4 subgroups). For each set of environmental descriptors, environmental, genomic, and G × E components were sequentially fitted. Variance components estimates confirmed the presence of G × E on milk yield, with its effect being larger than main genetic effect and the environmental effect for some models. Conversely, G × E was moderate for somatic cell score and small for milk composition. Genotype by environment interaction, when included, partially eroded the genomic effect (as compared with the models where G × E was not included), suggesting that the genomic variance could at least in part be attributed to G × E not appropriately accounted for. Model predictive ability was assessed using 3 cross-validation schemes (new bulls, incomplete progeny test, and new environmental conditions), and performance was compared with a reference model including only the main genomic effect. In each scenario, at least 1 of the models including G × E was able to perform better than the reference model, although it was not possible to find the overall best-performing model that included the same set of environmental descriptors. In general, the methodology used is promising in accounting for G × E in genomic predictions, but challenges exist in identifying a unique set of covariates capable of describing the entire variety of environments. Copyright © 2017 American Dairy Science Association. Published by Elsevier Inc. All rights reserved.

  3. An Intelligent Polar Cyberinfrastrucuture to Support Spatiotemporal Decision Making

    NASA Astrophysics Data System (ADS)

    Song, M.; Li, W.; Zhou, X.

    2014-12-01

    In the era of big data, polar sciences have already faced an urgent demand of utilizing intelligent approaches to support precise and effective spatiotemporal decision-making. Service-oriented cyberinfrastructure has advantages of seamlessly integrating distributed computing resources, and aggregating a variety of geospatial data derived from Earth observation network. This paper focuses on building a smart service-oriented cyberinfrastructure to support intelligent question answering related to polar datasets. The innovation of this polar cyberinfrastructure includes: (1) a problem-solving environment that parses geospatial question in natural language, builds geoprocessing rules, composites atomic processing services and executes the entire workflow; (2) a self-adaptive spatiotemporal filter that is capable of refining query constraints through semantic analysis; (3) a dynamic visualization strategy to support results animation and statistics in multiple spatial reference systems; and (4) a user-friendly online portal to support collaborative decision-making. By means of this polar cyberinfrastructure, we intend to facilitate integration of distributed and heterogeneous Arctic datasets and comprehensive analysis of multiple environmental elements (e.g. snow, ice, permafrost) to provide a better understanding of the environmental variation in circumpolar regions.

  4. The potential influence of short-term environmental variability on the composition of testate amoeba communities in Sphagnum peatlands.

    PubMed

    Sullivan, Maura E; Booth, Robert K

    2011-07-01

    Testate amoebae are a group of moisture-sensitive, shell-producing protozoa that have been widely used as indicators of changes in mean water-table depth within oligotrophic peatlands. However, short-term environmental variability (i.e., sub-annual) also probably influences community composition. The objective of this study was to assess the potential influence of short-term environmental variability on the composition of testate amoeba communities in Sphagnum-dominated peatlands. Testate amoebae and environmental conditions, including hourly measurements of relative humidity within the upper centimeter of the peatland surface, were examined throughout the 2008 growing season at 72 microsites within 11 peatlands of Pennsylvania and Wisconsin, USA. Relationships among testate amoeba communities, vegetation, depth to water table, pH, and an index of short-term environmental variability (EVI), were examined using nonmetric multidimensional scaling and correlation analysis. Results suggest that EVI influences testate amoeba communities, with some taxa more abundant under highly variable conditions (e.g., Arcella discoides, Difflugia pulex, and Hyalosphenia subflava) and others more abundant when environmental conditions at the peatland surface were relatively stable (e.g., Archerella flavum and Bullinularia indica). The magnitude of environmental variability experienced at the peatland surface appears to be primarily controlled by vegetation composition and density. In particular, sites with dense Sphagnum cover had lower EVI values than sites with loose-growing Sphagnum or vegetation dominated by vascular plants and/or non-Sphagnum bryophytes. Our results suggest that more environmental information may be inferred from testate amoebae than previously recognized. Knowledge of relationships between testate amoebae and short-term environmental variability should lead to more detailed and refined environmental inferences.

  5. A field analysis of lampricide photodegradation in Great Lakes tributaries.

    PubMed

    McConville, Megan B; Cohen, Natan M; Nowicki, Shawn M; Lantz, Stephen R; Hixson, Jase L; Ward, Adam S; Remucal, Christina K

    2017-07-19

    The lampricides 3-trifluoromethyl-4-nitrophenol (TFM) and 2',5-dichloro-4'-nitrosalicylanilide (niclosamide) are added to Great Lakes tributaries to target the sea lamprey, an invasive parasitic fish. This study examines the photochemical behavior of the lampricides in Carpenter Creek, Sullivan Creek, and the Manistique River. The observed loss of TFM in Carpenter and Sullivan Creeks (i.e., 34 and 19%) was similar to the loss of bromide in parallel time of passage studies (i.e., 30 and 29%), demonstrating that TFM photodegradation was minimal in both tributaries during the lampricide application. Furthermore, the absence of inorganic and organic photoproducts in the Manistique River demonstrates that TFM and niclosamide photodegradation was minimal in this large tributary, despite its long residence time (i.e., 3.3 days). Kinetic modeling was used to identify environmental variables primarily responsible for the limited photodegradation of TFM in the field compared to estimates from laboratory data. This analysis demonstrates that the lack of TFM photodegradation was attributable to the short residence times in Carpenter and Sullivan Creeks, while depth, time of year, time of day, and cloud cover influenced photochemical fate in the Manistique River. The modeling approach was extended to assess how many of the 140 United States tributaries treated with lampricides in 2015 and 2016 were amenable to TFM photolysis. While >50% removal of TFM due to photolysis could occur in 13 long and shallow tributaries, in most systems lampricides will reach the Great Lakes untransformed.

  6. Which environmental factors most strongly influence a street's appeal for bicycle transport among adults? A conjoint study using manipulated photographs.

    PubMed

    Mertens, Lieze; Van Dyck, Delfien; Ghekiere, Ariane; De Bourdeaudhuij, Ilse; Deforche, Benedicte; Van de Weghe, Nico; Van Cauwenberg, Jelle

    2016-09-01

    Micro-environmental factors (specific features within a streetscape), instead of macro-environmental factors (urban planning features), are more feasible to modify in existing neighborhoods and thus more practical to target for environmental interventions. Because it is often not possible to change the whole micro-environment at once, the current study aims to determine which micro-environmental factors should get the priority to target in physical environmental interventions increasing bicycle transport. Additionally, interaction effects among micro-environmental factors on the street's appeal for bicycle transport will be determined. In total, 1950 middle-aged adults completed a web-based questionnaire consisting of a set of 12 randomly assigned choice tasks with manipulated photographs. Seven micro-environmental factors (type of cycle path, speed limit, speed bump, vegetation, evenness of the cycle path surface, general upkeep and traffic density) were manipulated in each photograph. Conjoint analysis was used to analyze the data. Providing streets with a cycle path separated from motorized traffic seems to be the best strategy to increase the street's appeal for adults' bicycle transport. If this adjustment is not practically feasible, micro-environmental factors related to safety (i.e. speed limit, traffic density) may be more effective in promoting bicycle transport than micro-environmental factors related to comfort (i.e. evenness of the cycle path surface) or aesthetic (i.e. vegetation, general upkeep). On the other hand, when a more separated cycle path is already provided, micro-environmental factors related to comfort or aesthetic appeared to become more prominent. Findings obtained from this research could provide advice to physical environmental interventions about which environmental factors should get priority to modify in different environmental situations. The study was approved by the Ethics Committee of the Ghent University Hospital. B670201318588. Registered at 04/10/2013. http://www.ugent.be/ge/nl/faculteit/raden/ec.

  7. Demonstration of long-term increases in tropospheric O3 levels: causes and potential impacts.

    PubMed

    Susaya, Janice; Kim, Ki-Hyun; Shon, Zang-Ho; Brown, Richard J C

    2013-09-01

    Ground-level ozone (O3) is a well-known atmospheric pollutant with its adverse impacts on the environment and human health. Here, the tropospheric O3 concentrations monitored in seven major cities in Korea at monthly intervals over a 22-year period (1989-2010) are presented, and their long-term variability examined. The analysis of annual mean values of O3 (in nmolmol(-1), or ppb) showed a noticeable increase of 118±69% in all seven cities over the two decades (p<0.01). Changes in O3 levels are closely associated with both environmental (e.g., NOx (NO+NO2), SO2, CO, and total suspended particles (TSPs) (p<0.01), temperature, and sunshine hours) and common anthropogenic variables (e.g., population density and number of vehicles). Evidence collected in this study suggests that the atmospheric conditions in most major cities of Korea should be volatile organic compounds (VOCs) sensitive or NOx saturated with respect to O3 formation. As such, establishment of a proper management strategy seems a sensible approach to control tropospheric ozone concentrations in densely populated cities. Copyright © 2013 Elsevier Ltd. All rights reserved.

  8. Performance of Mixed Layer Models in Simulating SST in the Equatorial Pacific Ocean

    DTIC Science & Technology

    2008-02-23

    also used Environmental Model ( GDEM ) climatology [NA VOCEANO, for global validation. 2003]. The density difference values were chosen, so that the [6...were initialized from the monthly different at two different locations. Values of SS range from mean temperature and salinity for August from the GDEM ...environmental model ( GDEM -V) Version 3.0, OAML-DBD-72, 34 pp, Chassignet, E. P., H. E. Hurlburt, 0. M. Smedstad, G. R. Halliwell, A. J. Stennis Space Center

  9. Gis-based assessment of marine oil spill hazard and environmental vulnerability for the coasts of Crete in South Aegean Sea

    NASA Astrophysics Data System (ADS)

    Spanoudaki, Katerina; Nikiforakis, Ioannis K.; Kampanis, Nikolaos A.

    2017-04-01

    Developing effective early warning and coordination systems can save thousands of lives and protect people, property and the environment in the event of natural and man-made disasters. In its document "Towards Better Protection of Citizens against Disaster Risks: Strengthening Early Warning Systems in Europe", the Commission points out that it seeks to follow a multi-hazard approach, to develop near real time alert systems, to ensure a near real time dissemination of alerts to Participating States, and to improve its rapid analytical capacity. In this context, the EU project DECATASTROPHIZE (http://decatastrophize.eu/project/) co-financed by the EU Humanitarian Aid and Civil Protection aims to develop a Geospatial Early warning Decision Support System (GE-DSS) to assess, prepare for and respond to multiple and/or simultaneous natural and man-made hazards, disasters, and environmental incidents by using existing models/systems in each partner country (Cyprus, France, Greece, Italy and Spain) in a synergistic way on ONE multi-platform, called DECAT. Specifically, project partners will establish appropriate geo-databases for test areas and use existing hazard models to produce hazard and vulnerability geo-spatial information for earthquakes, landslides, tsunamis, floods, forest fires and marine oil spills. The GE-DSS in will consist of one source code with six geodatabases, i.e., one for each partner and risk data in the respective test area. Each partner organization will be able to manage and monitor its own data/database and their results using Multi-Criteria Decision Analysis (MCDA). The GE-DSS will be demonstrated at the local, regional and national levels through a set of Command Post and Table Top Disaster Exercises. As part of the DECAT GE-DSS, the gis-based geo-database and assessment of marine oil spill hazard and environmental vulnerability for the coasts of Crete in South Aegean Sea are presented here. Environmental Sensitivity Index (ESI) maps are produced comprising shoreline classification - ranked according to a scale relating to sensitivity, natural persistence of oil, and ease of cleanup (Adler and Inbar, 2007; Alves et al., 2014) - biological resources and human-use resources, i.e. specific areas that have added sensitivity and value because of their use, such as beaches, water intakes, and archaeological sites (NOAA, 2002). Seasonal hazard maps (surface oil slick, beached oil) are produced employing a modified version of the open source Lagrangian oil spill fate and transport model MEDSLIK-II (http://medslikii.bo.ingv.it/) coupled with a high-resolution 3D hydrodynamic model. The model predicts the transport and weathering of oil spills following a Lagrangian approach for the solution of the advection-diffusion equation. Transport is governed by the 3D sea currents and wave field. In addition to advective and diffusive displacements, the model simulates several physical and chemical processes that transform the oil (evaporation, emulsification, dispersion in the water column, biodegradation, adhesion to coast). The analysis is carried out under multiple oil spill scenarios accounting for the busiest ship lanes and meteorological conditions using multiple year hydrodynamics. The results highlight the hazard faced by coastal areas of Crete with high ESI. Acknowledgement This work has been co-financed by the EU Humanitarian Aid and Civil Protection under Grant Agreement No. ECHO/SUB/2015/713788/PREP - Project ''DECATASTROPHIZE : UsE of SDSS and MCDA To prepAre for diSasTeRs Or Plan for multIplE HaZards''. References Adler, E. & Inbar, M. (2007). Shoreline sensitivity to oil spills, the Mediterranean coast of Israel: Assessment and analysis. Ocean Coast. Manage., 50 (1-2), 24-34. Alves, T. M., Kokinou, E. & Zodiatis, G. A (2014). A three-step model to assess shoreline and offshore susceptibility to oil spills: The South Aegean (Crete) as an analogue for confined marine basins. Mar. Poll. Bull., 86, 443-457. NOAA (2002). Environmental Sensitivity Index Guidelines, version 3.0. NOAA Technical Memorandum NOS OR&R 11. Seattle: Hazardous Response and Assessment Division, National Oceanic and Atmospheric Administration, 129p.

  10. Effects of different swine manure to wheat straw ratios on antibiotic resistance genes and the microbial community structure during anaerobic digestion.

    PubMed

    Song, Wen; Wang, Xiaojuan; Gu, Jie; Zhang, Sheqi; Yin, Yanan; Li, Yang; Qian, Xun; Sun, Wei

    2017-05-01

    This study explored the effects of different mass ratios of swine manure relative to wheat straw (3:7, 5:5, and 7:3, i.e., control reactors C1, C2, and C3, respectively) on variations in antibiotic resistance genes (ARGs) and the microbial community during anaerobic digestion (AD). The cumulative biogas production volumes were 1711, 3857, and 3226mL in C1, C2, and C3, respectively. After AD, the total relative abundance of ARGs decreased by 4.23 logs in C3, whereas the reductions were only 1.03 and 1.37 logs in C1 and C2, respectively. Network analysis showed that the genera Solibacillus, Enterococcus, Facklamia, Corynebacterium_1, and Acinetobacter were potential hosts of ermB, sul1, and dfrA7. Redundancy analysis showed that the bacterial communities and environmental factors played important roles in the variation in ARGs. Thus, reductions in ARGs should be considered before reusing animal manure treated by AD. Copyright © 2017 Elsevier Ltd. All rights reserved.

  11. Edwardsiella ictaluri Encodes an Acid-Activated Urease That Is Required for Intracellular Replication in Channel Catfish (Ictalurus punctatus) Macrophages▿

    PubMed Central

    Booth, Natha J.; Beekman, Judith B.; Thune, Ronald L.

    2009-01-01

    Genomic analysis indicated that Edwardsiella ictaluri encodes a putative urease pathogenicity island containing the products of nine open reading frames, including urea and ammonium transporters. In vitro studies with wild-type E. ictaluri and a ureG::kan urease mutant strain indicated that E. ictaluri is significantly tolerant of acid conditions (pH 3.0) but that urease activity is not required for acid tolerance. Growth studies demonstrated that E. ictaluri is unable to grow at pH 5 in the absence of urea but is able to elevate the environmental pH from pH 5 to pH 7 and grow when exogenous urea is available. Substantial production of ammonia was observed for wild-type E. ictaluri in vitro in the presence of urea at low pH, and optimal activity occurred at pH 2 to 3. No ammonia production was detected for the urease mutant. Proteomic analysis with two-dimensional gel electrophoresis indicated that urease proteins are expressed at both pH 5 and pH 7, although urease activity is detectable only at pH 5. Urease was not required for initial invasion of catfish but was required for subsequent proliferation and virulence. Urease was not required for initial uptake or survival in head kidney-derived macrophages but was required for intracellular replication. Intracellular replication of wild-type E. ictaluri was significantly enhanced when urea was present, indicating that urease plays an important role in intracellular survival and replication, possibly through neutralization of the acidic environment of the phagosome. PMID:19749068

  12. Surveys of environmental DNA (eDNA): a new approach to estimate occurrence in Vulnerable manatee populations

    USGS Publications Warehouse

    Hunter, Margaret; Meigs-Friend, Gaia; Ferrante, Jason; Takoukam Kamla, Aristide; Dorazio, Robert; Keith Diagne, Lucy; Luna, Fabia; Lanyon, Janet M.; Reid, James P.

    2018-01-01

    Environmental DNA (eDNA) detection is a technique used to non-invasively detect cryptic, low density, or logistically difficult-to-study species, such as imperiled manatees. For eDNA measurement, genetic material shed into the environment is concentrated from water samples and analyzed for the presence of target species. Cytochrome bquantitative PCR and droplet digital PCR eDNA assays were developed for the 3 Vulnerable manatee species: African, Amazonian, and both subspecies of the West Indian (Florida and Antillean) manatee. Environmental DNA assays can help to delineate manatee habitat ranges, high use areas, and seasonal population changes. To validate the assay, water was analyzed from Florida’s east coast containing a high-density manatee population and produced 31564 DNA molecules l-1on average and high occurrence (ψ) and detection (p) estimates (ψ = 0.84 [0.40-0.99]; p = 0.99 [0.95-1.00]; limit of detection 3 copies µl-1). Similar occupancy estimates were produced in the Florida Panhandle (ψ = 0.79 [0.54-0.97]) and Cuba (ψ = 0.89 [0.54-1.00]), while occupancy estimates in Cameroon were lower (ψ = 0.49 [0.09-0.95]). The eDNA-derived detection estimates were higher than those generated using aerial survey data on the west coast of Florida and may be effective for population monitoring. Subsequent eDNA studies could be particularly useful in locations where manatees are (1) difficult to identify visually (e.g. the Amazon River and Africa), (2) are present in patchy distributions or are on the verge of extinction (e.g. Jamaica, Haiti), and (3) where repatriation efforts are proposed (e.g. Brazil, Guadeloupe). Extension of these eDNA techniques could be applied to other imperiled marine mammal populations such as African and Asian dugongs.

  13. Impact of Indoor Physical Environment on Learning Efficiency in Different Types of Tasks: A 3 × 4 × 3 Full Factorial Design Analysis.

    PubMed

    Xiong, Lilin; Huang, Xiao; Li, Jie; Mao, Peng; Wang, Xiang; Wang, Rubing; Tang, Meng

    2018-06-13

    Indoor physical environments appear to influence learning efficiency nowadays. For improvement in learning efficiency, environmental scenarios need to be designed when occupants engage in different learning tasks. However, how learning efficiency is affected by indoor physical environment based on task types are still not well understood. The present study aims to explore the impacts of three physical environmental factors (i.e., temperature, noise, and illuminance) on learning efficiency according to different types of tasks, including perception, memory, problem-solving, and attention-oriented tasks. A 3 × 4 × 3 full factorial design experiment was employed in a university classroom with 10 subjects recruited. Environmental scenarios were generated based on different levels of temperature (17 °C, 22 °C, and 27 °C), noise (40 dB(A), 50 dB(A), 60 dB(A), and 70 dB(A)) and illuminance (60 lx, 300 lx, and 2200 lx). Accuracy rate (AC), reaction time (RT), and the final performance indicator (PI) were used to quantify learning efficiency. The results showed ambient temperature, noise, and illuminance exerted significant main effect on learning efficiency based on four task types. Significant concurrent effects of the three factors on final learning efficiency was found in all tasks except problem-solving-oriented task. The optimal environmental scenarios for top learning efficiency were further identified under different environmental interactions. The highest learning efficiency came in thermoneutral, relatively quiet, and bright conditions in perception-oriented task. Subjects performed best under warm, relatively quiet, and moderately light exposure when recalling images in the memory-oriented task. Learning efficiency peaked to maxima in thermoneutral, fairly quiet, and moderately light environment in problem-solving process while in cool, fairly quiet and bright environment with regard to attention-oriented task. The study provides guidance for building users to conduct effective environmental intervention with simultaneous controls of ambient temperature, noise, and illuminance. It contributes to creating the most suitable indoor physical environment for improving occupants learning efficiency according to different task types. The findings could further supplement the present indoor environment-related standards or norms with providing empirical reference on environmental interactions.

  14. A Comparative Analysis of Life-Cycle Assessment Tools for ...

    EPA Pesticide Factsheets

    We identified and evaluated five life-cycle assessment tools that community decision makers can use to assess the environmental and economic impacts of end-of-life (EOL) materials management options. The tools evaluated in this report are waste reduction mode (WARM), municipal solid waste-decision support tool (MSW-DST), solid waste optimization life-cycle framework (SWOLF), environmental assessment system for environmental technologies (EASETECH), and waste and resources assessment for the environment (WRATE). WARM, MSW-DST, and SWOLF were developed for US-specific materials management strategies, while WRATE and EASETECH were developed for European-specific conditions. All of the tools (with the exception of WARM) allow specification of a wide variety of parameters (e.g., materials composition and energy mix) to a varying degree, thus allowing users to model specific EOL materials management methods even outside the geographical domain they are originally intended for. The flexibility to accept user-specified input for a large number of parameters increases the level of complexity and the skill set needed for using these tools. The tools were evaluated and compared based on a series of criteria, including general tool features, the scope of the analysis (e.g., materials and processes included), and the impact categories analyzed (e.g., climate change, acidification). A series of scenarios representing materials management problems currently relevant to c

  15. Health risk assessment of emissions of dioxins and furans from a municipal waste incinerator: comparison with other emission sources.

    PubMed

    Meneses, Montse; Schuhmacher, Marta; Domingo, José L

    2004-06-01

    The aim of this study was to calculate the incremental lifetime-risk to dioxins and furans (PCDD/Fs) for the population living in the surroundings of a municipal solid waste incinerator (MSWI), as well as to establish the potential reduction on human health risks as a consequence of the adaptation to the EU legislation on pollutant emissions from the MSWI stack. Analytical and modelled results were obtained. PCDD/F concentrations in environmental media were determined by means of a simple-compartment-multimedia model (air-soil-vegetation model). Predicted and measured PCDD/F concentrations in soils and vegetation were compared, and the effects of MSWI emissions in the environmental media were determined. Human health risks due to PCDD/F emissions from the MSWI were also estimated based on I-TEQ measured and modelled in various environmental media. Cancer risks due to PCDD/F emissions of the plant were 1.07E-07 and 3.08E-09, before and after installation of the clean air system, respectively. On the other hand, cancer risks due to other PCDD/F emission sources in the area were 5.54E-06 and 1.86E-06. Total PCDD/F cancer risks (including those from diet) for the population living in the vicinity of the MSWI were 1.3E-04 and 4.25E-05, respectively (67.6% of reduction). Hazard ratio for total PCDD/F exposure (including diet) decreased during the last 5 years from 1.16 to 0.38. The above data show that other emission sources of PCDD/Fs also have a notable environmental impact on the area under direct influence of the MSWI.

  16. Biodiversity Metrics

    EPA Science Inventory

    Ecosystem services, i.e., "services provided to humans from natural systems," have become a key focus of this century in resource management, conservation planning, human well-being, and environmental decision analysis. Mapping and quantifying ecosystem services have become strat...

  17. Assessing environmental DNA detection in controlled lentic systems.

    PubMed

    Moyer, Gregory R; Díaz-Ferguson, Edgardo; Hill, Jeffrey E; Shea, Colin

    2014-01-01

    Little consideration has been given to environmental DNA (eDNA) sampling strategies for rare species. The certainty of species detection relies on understanding false positive and false negative error rates. We used artificial ponds together with logistic regression models to assess the detection of African jewelfish eDNA at varying fish densities (0, 0.32, 1.75, and 5.25 fish/m3). Our objectives were to determine the most effective water stratum for eDNA detection, estimate true and false positive eDNA detection rates, and assess the number of water samples necessary to minimize the risk of false negatives. There were 28 eDNA detections in 324, 1-L, water samples collected from four experimental ponds. The best-approximating model indicated that the per-L-sample probability of eDNA detection was 4.86 times more likely for every 2.53 fish/m3 (1 SD) increase in fish density and 1.67 times less likely for every 1.02 C (1 SD) increase in water temperature. The best section of the water column to detect eDNA was the surface and to a lesser extent the bottom. Although no false positives were detected, the estimated likely number of false positives in samples from ponds that contained fish averaged 3.62. At high densities of African jewelfish, 3-5 L of water provided a >95% probability for the presence/absence of its eDNA. Conversely, at moderate and low densities, the number of water samples necessary to achieve a >95% probability of eDNA detection approximated 42-73 and >100 L, respectively. Potential biases associated with incomplete detection of eDNA could be alleviated via formal estimation of eDNA detection probabilities under an occupancy modeling framework; alternatively, the filtration of hundreds of liters of water may be required to achieve a high (e.g., 95%) level of certainty that African jewelfish eDNA will be detected at low densities (i.e., <0.32 fish/m3 or 1.75 g/m3).

  18. Ecosystem approach to fisheries: Exploring environmental and trophic effects on Maximum Sustainable Yield (MSY) reference point estimates

    PubMed Central

    Kumar, Rajeev; Pitcher, Tony J.; Varkey, Divya A.

    2017-01-01

    We present a comprehensive analysis of estimation of fisheries Maximum Sustainable Yield (MSY) reference points using an ecosystem model built for Mille Lacs Lake, the second largest lake within Minnesota, USA. Data from single-species modelling output, extensive annual sampling for species abundances, annual catch-survey, stomach-content analysis for predatory-prey interactions, and expert opinions were brought together within the framework of an Ecopath with Ecosim (EwE) ecosystem model. An increase in the lake water temperature was observed in the last few decades; therefore, we also incorporated a temperature forcing function in the EwE model to capture the influences of changing temperature on the species composition and food web. The EwE model was fitted to abundance and catch time-series for the period 1985 to 2006. Using the ecosystem model, we estimated reference points for most of the fished species in the lake at single-species as well as ecosystem levels with and without considering the influence of temperature change; therefore, our analysis investigated the trophic and temperature effects on the reference points. The paper concludes that reference points such as MSY are not stationary, but change when (1) environmental conditions alter species productivity and (2) fishing on predators alters the compensatory response of their prey. Thus, it is necessary for the management to re-estimate or re-evaluate the reference points when changes in environmental conditions and/or major shifts in species abundance or community structure are observed. PMID:28957387

  19. 49 CFR 1105.3 - Information and assistance.

    Code of Federal Regulations, 2014 CFR

    2014-10-01

    ... 49 Transportation 8 2014-10-01 2014-10-01 false Information and assistance. 1105.3 Section 1105.3... Information and assistance. Information and assistance regarding the rules and the Board's environmental and historic review process is available by writing or calling the Section of Environmental Analysis, Surface...

  20. 49 CFR 1105.3 - Information and assistance.

    Code of Federal Regulations, 2010 CFR

    2010-10-01

    ... 49 Transportation 8 2010-10-01 2010-10-01 false Information and assistance. 1105.3 Section 1105.3... Information and assistance. Information and assistance regarding the rules and the Board's environmental and historic review process is available by writing or calling the Section of Environmental Analysis, Surface...

  1. 49 CFR 1105.3 - Information and assistance.

    Code of Federal Regulations, 2013 CFR

    2013-10-01

    ... 49 Transportation 8 2013-10-01 2013-10-01 false Information and assistance. 1105.3 Section 1105.3... Information and assistance. Information and assistance regarding the rules and the Board's environmental and historic review process is available by writing or calling the Section of Environmental Analysis, Surface...

  2. Chemical evaluation of electronic cigarettes.

    PubMed

    Cheng, Tianrong

    2014-05-01

    To review the available evidence evaluating the chemicals in refill solutions, cartridges, aerosols and environmental emissions of electronic cigarettes (e-cigarettes). Systematic literature searches were conducted to identify research related to e-cigarettes and chemistry using 5 reference databases and 11 search terms. The search date range was January 2007 to September 2013. The search yielded 36 articles, of which 29 were deemed relevant for analysis. The levels of nicotine, tobacco-specific nitrosamines (TSNAs), aldehydes, metals, volatile organic compounds (VOCs), flavours, solvent carriers and tobacco alkaloids in e-cigarette refill solutions, cartridges, aerosols and environmental emissions vary considerably. The delivery of nicotine and the release of TSNAs, aldehydes and metals are not consistent across products. Furthermore, the nicotine level listed on the labels of e-cigarette cartridges and refill solutions is often significantly different from measured values. Phenolic compounds, polycyclic aromatic hydrocarbons and drugs have also been reported in e-cigarette refill solutions, cartridges and aerosols. Varying results in particle size distributions of particular matter emissions from e-cigarettes across studies have been observed. Methods applied for the generation and chemical analyses of aerosols differ across studies. Performance characteristics of e-cigarette devices also vary across and within brands. Additional studies based on knowledge of e-cigarette user behaviours and scientifically validated aerosol generation and chemical analysis methods would be helpful in generating reliable measures of chemical quantities. This would allow comparisons of e-cigarette aerosol and traditional smoke constituent levels and would inform an evaluation of the toxicity potential of e-cigarettes.

  3. Utilising E-on Vue and Unity 3D scenes to generate synthetic images and videos for visible signature analysis

    NASA Astrophysics Data System (ADS)

    Madden, Christopher S.; Richards, Noel J.; Culpepper, Joanne B.

    2016-10-01

    This paper investigates the ability to develop synthetic scenes in an image generation tool, E-on Vue, and a gaming engine, Unity 3D, which can be used to generate synthetic imagery of target objects across a variety of conditions in land environments. Developments within these tools and gaming engines have allowed the computer gaming industry to dramatically enhance the realism of the games they develop; however they utilise short cuts to ensure that the games run smoothly in real-time to create an immersive effect. Whilst these short cuts may have an impact upon the realism of the synthetic imagery, they do promise a much more time efficient method of developing imagery of different environmental conditions and to investigate the dynamic aspect of military operations that is currently not evaluated in signature analysis. The results presented investigate how some of the common image metrics used in target acquisition modelling, namely the Δμ1, Δμ2, Δμ3, RSS, and Doyle metrics, perform on the synthetic scenes generated by E-on Vue and Unity 3D compared to real imagery of similar scenes. An exploration of the time required to develop the various aspects of the scene to enhance its realism are included, along with an overview of the difficulties associated with trying to recreate specific locations as a virtual scene. This work is an important start towards utilising virtual worlds for visible signature evaluation, and evaluating how equivalent synthetic imagery is to real photographs.

  4. FE Fyodor Yurchikhin works on the Uragan Experiment in the SM

    NASA Image and Video Library

    2010-07-08

    ISS024-E-007525 (8 July 2010) --- In the International Space Station’s Zvezda Service Module, Russian cosmonaut Fyodor Yurchikhin, Expedition 24 flight engineer, conducts a session for Russia's Environmental Safety Agency (EKON), making observations and taking KPT-3 aerial photography of environmental conditions on Earth.

  5. FE Fyodor Yurchikhin works on the Uragan Experiment in the SM

    NASA Image and Video Library

    2010-07-08

    ISS024-E-007526 (8 July 2010) --- In the International Space Station’s Zvezda Service Module, Russian cosmonaut Fyodor Yurchikhin, Expedition 24 flight engineer, conducts a session for Russia's Environmental Safety Agency (EKON), making observations and taking KPT-3 aerial photography of environmental conditions on Earth.

  6. FE Fyodor Yurchikhin works on the Uragan Experiment in the SM

    NASA Image and Video Library

    2010-07-08

    ISS024-E-007527 (8 July 2010) --- In the International Space Station’s Zvezda Service Module, Russian cosmonaut Fyodor Yurchikhin, Expedition 24 flight engineer, conducts a session for Russia's Environmental Safety Agency (EKON), making observations and taking KPT-3 aerial photography of environmental conditions on Earth.

  7. FE Fyodor Yurchikhin works on the Uragan Experiment in the SM

    NASA Image and Video Library

    2010-07-08

    ISS024-E-007521 (8 July 2010) --- In the International Space Station’s Zvezda Service Module, Russian cosmonaut Fyodor Yurchikhin, Expedition 24 flight engineer, prepares to conduct a session for Russia's Environmental Safety Agency (EKON), making observations and taking KPT-3 aerial photography of environmental conditions on Earth.

  8. 77 FR 61748 - Annual Public Meeting of the Interagency Steering Committee on Multimedia Environmental Modeling

    Federal Register 2010, 2011, 2012, 2013, 2014

    2012-10-11

    ... biogeochemical studies; (3) cyber-water research program; and (4) integration modeling for national weather... agencies began formal cooperation under a Memorandum of Understanding (MOU) on the research and development of multimedia (i.e. air, soil, water) environmental models. This MOU established the Federal...

  9. 78 FR 43842 - State of Kansas; Authorization of State Hazardous Waste Management Program

    Federal Register 2010, 2011, 2012, 2013, 2014

    2013-07-22

    ... by August 21, 2013. ADDRESSES: Submit your comments by one of the following methods: 1. Federal e... comments. 2. Email: haugen.lisa@epa.gov . 3. Mail: Lisa Haugen, Environmental Protection Agency, Region 7...: Deliver your comments to Lisa Haugen, Environmental Protection Agency, Region 7, Enforcement Coordination...

  10. Gamification - Environmental and Sustainable Development Organizations Could Do More

    NASA Astrophysics Data System (ADS)

    Ziegler, C. R.; Miller, C. A.; Kilaru, V.; French, R. A.; Costanza, R.; Brookes, A.

    2013-12-01

    The use of digital games to foster sustainable development and environmental goals has grown over the last 10 years. Innovative thinking and the origins of 'serious games,' 'games for change' and 'gamification' are partly rooted in movies and science fiction. Existing games illustrate a spectrum of approaches: for example, World Food Programme's FoodForce and University of Washington's Foldit. Environmental organizations globally (e.g. US EPA) have dabbled with game development and gamification, but have only touched the tip of the iceberg, particularly when compared to the success of the commercial gaming industry. We explore: 1) the intersection of environmental organization mission statements in the context of gamification efforts , 2) some examples of existing games, from simple to complex, 3) business model approaches (e.g. game development partnerships with academia, private industry, NGOs, etc.), 4) barriers, and 5) benefits of a more concerted and technologically-advanced approach to gamification for environmental organizations.

  11. Differentiation of Xylella fastidiosa Strains via Multilocus Sequence Analysis of Environmentally Mediated Genes (MLSA-E)

    PubMed Central

    Parker, Jennifer K.; Havird, Justin C.

    2012-01-01

    Isolates of the plant pathogen Xylella fastidiosa are genetically very similar, but studies on their biological traits have indicated differences in virulence and infection symptomatology. Taxonomic analyses have identified several subspecies, and phylogenetic analyses of housekeeping genes have shown broad host-based genetic differences; however, results are still inconclusive for genetic differentiation of isolates within subspecies. This study employs multilocus sequence analysis of environmentally mediated genes (MLSA-E; genes influenced by environmental factors) to investigate X. fastidiosa relationships and differentiate isolates with low genetic variability. Potential environmentally mediated genes, including host colonization and survival genes related to infection establishment, were identified a priori. The ratio of the rate of nonsynonymous substitutions to the rate of synonymous substitutions (dN/dS) was calculated to select genes that may be under increased positive selection compared to previously studied housekeeping genes. Nine genes were sequenced from 54 X. fastidiosa isolates infecting different host plants across the United States. Results of maximum likelihood (ML) and Bayesian phylogenetic (BP) analyses are in agreement with known X. fastidiosa subspecies clades but show novel within-subspecies differentiation, including geographic differentiation, and provide additional information regarding host-based isolate variation and specificity. dN/dS ratios of environmentally mediated genes, though <1 due to high sequence similarity, are significantly greater than housekeeping gene dN/dS ratios and correlate with increased sequence variability. MLSA-E can more precisely resolve relationships between closely related bacterial strains with low genetic variability, such as X. fastidiosa isolates. Discovering the genetic relationships between X. fastidiosa isolates will provide new insights into the epidemiology of populations of X. fastidiosa, allowing improved disease management in economically important crops. PMID:22194287

  12. Differentiation of Xylella fastidiosa strains via multilocus sequence analysis of environmentally mediated genes (MLSA-E).

    PubMed

    Parker, Jennifer K; Havird, Justin C; De La Fuente, Leonardo

    2012-03-01

    Isolates of the plant pathogen Xylella fastidiosa are genetically very similar, but studies on their biological traits have indicated differences in virulence and infection symptomatology. Taxonomic analyses have identified several subspecies, and phylogenetic analyses of housekeeping genes have shown broad host-based genetic differences; however, results are still inconclusive for genetic differentiation of isolates within subspecies. This study employs multilocus sequence analysis of environmentally mediated genes (MLSA-E; genes influenced by environmental factors) to investigate X. fastidiosa relationships and differentiate isolates with low genetic variability. Potential environmentally mediated genes, including host colonization and survival genes related to infection establishment, were identified a priori. The ratio of the rate of nonsynonymous substitutions to the rate of synonymous substitutions (dN/dS) was calculated to select genes that may be under increased positive selection compared to previously studied housekeeping genes. Nine genes were sequenced from 54 X. fastidiosa isolates infecting different host plants across the United States. Results of maximum likelihood (ML) and Bayesian phylogenetic (BP) analyses are in agreement with known X. fastidiosa subspecies clades but show novel within-subspecies differentiation, including geographic differentiation, and provide additional information regarding host-based isolate variation and specificity. dN/dS ratios of environmentally mediated genes, though <1 due to high sequence similarity, are significantly greater than housekeeping gene dN/dS ratios and correlate with increased sequence variability. MLSA-E can more precisely resolve relationships between closely related bacterial strains with low genetic variability, such as X. fastidiosa isolates. Discovering the genetic relationships between X. fastidiosa isolates will provide new insights into the epidemiology of populations of X. fastidiosa, allowing improved disease management in economically important crops.

  13. [Bad tourist behaviors and their environmental impacts on Xixi National Wetland Park in Hangzhou].

    PubMed

    Wang, Guo-Xin; Wang, Ru-Song; Mao, Chun-Hong

    2009-06-01

    By the methods of site investigation, data collection and correlation analysis, the bad tourist behaviors and their environmental impacts on Xixi National Wetland Park in 2006 were studied. The occurrence probabilities of three bad tourist behaviors, i.e., picking, trampling, and littering were 6.5%, 10.3% and 12.6%, respectively. Picking probability was primarily related to the vegetation types along walkways, while the scale of heavy trampling was negatively correlated with tour distance from the entrance. Waste production by each tourist was 782 g x d(-1) on average. The waste from littering amounted for 13.6% of the total. Tourist flow fluctuations of daily, weekly, and monthly perspectives for the study area showed high seasonality and successive days of overloaded tourist flows during peak seasons, which caused an increase of bad tourist behaviors. However, the water quality in the Park was not affected because of the improvement of dredging facilities.

  14. Design and Clinical Feasibility of Personal Wearable Monitor for Measurement of Activity and Environmental Exposure

    PubMed Central

    Ribón Fletcher, Richard; Oreskovic, Nicolas M.; Robinson, Alyssa I.

    2015-01-01

    Human exposure to specific environmental factors (e.g. air quality, lighting, and sound) is known to play an important role in the pathogenesis of many chronic diseases (e.g. asthma) and mental health disorders (e.g. anxiety). However, conventional fixed environmental monitoring stations are sparsely located and, despite environmental models, cannot adequately assess individual exposure levels. New forms of low-cost portable monitors have begun to emerge that enable the collection of higher spatial density “crowd sourced” data; however, the first generation of these low-cost environmental monitors have generally not been suitable for clinical environmental health studies due to practical challenges such as calibration, reproducibility, form factor, and battery life. In this paper, we present a wearable environmental monitor that overcomes these challenges and can be used in clinical studies The new device, called “Eco-Mini,” can be used without a smart phone and is capable of locally sampling and recording a variety of environmental parameters (Ozone, Sulfur Dioxide, Volatile Organic Compounds, humidity, temperature, ambient light color balance, and sound level) as well as individual activity (3-axis accelerometer) and location (GPS). In this paper, we also report findings and discuss lessons learned from a feasibility study conducted for one week with pediatric patients as part of an ongoing asthma research study. PMID:25570098

  15. Integrating GIS and ABM to Explore Spatiotemporal Dynamics

    NASA Astrophysics Data System (ADS)

    Sun, M.; Jiang, Y.; Yang, C.

    2013-12-01

    Agent-based modeling as a methodology for the bottom-up exploration with the account of adaptive behavior and heterogeneity of system components can help discover the development and pattern of the complex social and environmental system. However, ABM is a computationally intensive process especially when the number of system components becomes large and the agent-agent/agent-environmental interaction is modeled very complex. Most of traditional ABM frameworks developed based on CPU do not have a satisfying computing capacity. To address the problem and as the emergence of advanced techniques, GPU computing with CUDA can provide powerful parallel structure to enable the complex simulation of spatiotemporal dynamics. In this study, we first develop a GPU-based ABM system. Secondly, in order to visualize the dynamics generated from the movement of agent and the change of agent/environmental attributes during the simulation, we integrate GIS into the ABM system. Advanced geovisualization technologies can be utilized for representing the spatiotemporal change events, such as proper 2D/3D maps with state-of-the-art symbols, space-time cube and multiple layers each of which presents pattern in one time-stamp, etc. Thirdly, visual analytics which include interactive tools (e.g. grouping, filtering, linking, etc.) is included in our ABM-GIS system to help users conduct real-time data exploration during the progress of simulation. Analysis like flow analysis and spatial cluster analysis can be integrated according to the geographical problem we want to explore.

  16. Housing is positively associated with invasive exotic plant species richness in New England, USA.

    PubMed

    Gavier-Pizarro, Gregorio I; Radeloff, Volker C; Stewart, Susan I; Huebner, Cynthia D; Keuler, Nicholas S

    2010-10-01

    Understanding the factors related to invasive exotic species distributions at broad spatial scales has important theoretical and management implications, because biological invasions are detrimental to many ecosystem functions and processes. Housing development facilitates invasions by disturbing land cover, introducing nonnative landscaping plants, and facilitating dispersal of propagules along roads. To evaluate relationships between housing and the distribution of invasive exotic plants, we asked (1) how strongly is housing associated with the spatial distribution of invasive exotic plants compared to other anthropogenic and environmental factors; (2) what type of housing pattern is related to the richness of invasive exotic plants; and (3) do invasive plants represent ecological traits associated with specific housing patterns? Using two types of regression analysis (best subset analysis and hierarchical partitioning analysis), we found that invasive exotic plant richness was equally or more strongly related to housing variables than to other human (e.g., mean income and roads) and environmental (e.g., topography and forest cover) variables at the county level across New England. Richness of invasive exotic plants was positively related to area of wildland-urban interface (WUI), low-density residential areas, change in number of housing units between 1940 and 2000, mean income, plant productivity (NDVI), and altitudinal range and rainfall; it was negatively related to forest area and connectivity. Plant life history traits were not strongly related to housing patterns. We expect the number of invasive exotic plants to increase as a result of future housing growth and suggest that housing development be considered a primary factor in plans to manage and monitor invasive exotic plant species.

  17. Insights into the environmental resistance gene pool from the genome sequence of the multidrug-resistant environmental isolate Escherichia coli SMS-3-5.

    PubMed

    Fricke, W Florian; Wright, Meredith S; Lindell, Angela H; Harkins, Derek M; Baker-Austin, Craig; Ravel, Jacques; Stepanauskas, Ramunas

    2008-10-01

    The increasing occurrence of multidrug-resistant pathogens of clinical and agricultural importance is a global public health concern. While antimicrobial use in human and veterinary medicine is known to contribute to the dissemination of antimicrobial resistance, the impact of microbial communities and mobile resistance genes from the environment in this process is not well understood. Isolated from an industrially polluted aquatic environment, Escherichia coli SMS-3-5 is resistant to a record number of antimicrobial compounds from all major classes, including two front-line fluoroquinolones (ciprofloxacin and moxifloxacin), and in many cases at record-high concentrations. To gain insights into antimicrobial resistance in environmental bacterial populations, the genome of E. coli SMS-3-5 was sequenced and compared to the genome sequences of other E. coli strains. In addition, selected genetic loci from E. coli SMS-3-5 predicted to be involved in antimicrobial resistance were phenotypically characterized. Using recombinant vector clones from shotgun sequencing libraries, resistance to tetracycline, streptomycin, and sulfonamide/trimethoprim was assigned to a single mosaic region on a 130-kb plasmid (pSMS35_130). The remaining plasmid backbone showed similarity to virulence plasmids from avian-pathogenic E. coli (APEC) strains. Individual resistance gene cassettes from pSMS35_130 are conserved among resistant bacterial isolates from multiple phylogenetic and geographic sources. Resistance to quinolones was assigned to several chromosomal loci, mostly encoding transport systems that are also present in susceptible E. coli isolates. Antimicrobial resistance in E. coli SMS-3-5 is therefore dependent both on determinants acquired from a mobile gene pool that is likely available to clinical and agricultural pathogens, as well, and on specifically adapted multidrug efflux systems. The association of antimicrobial resistance with APEC virulence genes on pSMS35_130 highlights the risk of promoting the spread of virulence through the extensive use of antibiotics.

  18. Persistence and innovation effects in genetic and environmental factors in negative emotionality during infancy: A twin study.

    PubMed

    Schumann, Lyndall; Boivin, Michel; Paquin, Stéphane; Lacourse, Eric; Brendgen, Mara; Vitaro, Frank; Dionne, Ginette; Tremblay, Richard E; Booij, Linda

    2017-01-01

    Difficult temperament in infancy is a risk factor for forms of later internalizing and externalizing psychopathology, including depression and anxiety. A better understanding of the roots of difficult temperament requires assessment of its early development with a genetically informative design. The goal of this study was to estimate genetic and environmental contributions to individual differences in infant negative emotionality, their persistence over time and their influences on stability between 5 and 18 months of age. Participants were 244 monozygotic and 394 dizygotic twin pairs (49.7% male) recruited from birth. Mothers rated their twins for negative emotionality at 5 and 18 months. Longitudinal analysis of stability and innovation between the two time points was performed in Mplus. There were substantial and similar heritability (approximately 31%) and shared environmental (57.3%) contributions to negative emotionality at both 5 and 18 months. The trait's interindividual stability across time was both genetically- and environmentally- mediated. Evidence of innovative effects (i.e., variance at 18 months independent from variance at 5 months) indicated that negative emotionality is developmentally dynamic and affected by persistent and new genetic and environmental factors at 18 months. In the first two years of life, ongoing genetic and environmental influences support temperamental negative emotionality but new genetic and environmental factors also indicate dynamic change of those factors across time. A better understanding of the source and timing of factors on temperament in early development, and role of sex, could improve efforts to prevent related psychopathology.

  19. Decoherence: Intrinsic, Extrinsic, and Environmental

    NASA Astrophysics Data System (ADS)

    Stamp, Philip

    2012-02-01

    Environmental decoherence times have been difficult to predict in solid-state systems. In spin systems, environmental decoherence is predicted to arise from nuclear spins, spin-phonon interactions, and long-range dipolar interactions [1]. Recent experiments have confirmed these predictions quantitatively in crystals of Fe8 molecules [2]. Coherent spin dynamics was observed over macroscopic volumes, with a decoherence Q-factor Qφ= 1.5 x10^6 (the upper predicted limit in this system being Qφ= 6 x10^7). Decoherence from dipolar interactions is particularly complex, and depends on the shape and the quantum state of the system. No extrinsic ``noise'' decoherence was observed. The generalization to quantum dot and superconducting qubit systems is also discussed. We then discuss searches for ``intrinsic'' decoherence [3,4], coming from non-linear corrections to quantum mechanics. Particular attention is paid to condensed matter tests of such intrinsic decoherence, in hybrid spin/optomechanical systems, and to ways of distinguishing intrinsic decoherence from environmental and extrinsic decoherence sources. [4pt] [1] Morello, A. Stamp, P. C. E. & Tupitsyn, Phys. Rev. Lett. 97, 207206 (2006).[0pt] [2] S. Takahashi et al., Nature 476, 76 (2011).[0pt] [3] Stamp, P. C. E., Stud. Hist. Phil. Mod. Phys. 37, 467 (2006). [0pt] [4] Stamp, P.C.E., Phil. Trans. Roy. Soc. A (to be published)

  20. A case of Vibrio vulnificus infection complicated with fulminant purpura: gene and biotype analysis of the pathogen

    PubMed Central

    Nakayama, Akifumi; Kitagawa, Daisuke; Fukushima, Hidetada; Asai, Hideki; Kawai, Yasuyuki; Okuchi, Kazuo

    2017-01-01

    Introduction. Vibrio vulnificus (V. vulnificus) causes a severe infection that develops in the compromised host. Its pathophysiology is classified into three types: (1) primary septicaemia, (2) gastrointestinal illness pattern and (3) wound infection pattern. Of these, primary septicaemia is critical. V. vulnificus can be classified into three biotypes and two genotypes and its pathogenicity is type-dependent. Case presentation. A 47-year-old man presented to a local hospital with chief complaints of fever, bilateral lower limb pain and diarrhoea. He had no history of foreign travel or known medical problems. He was in septic shock and developed fulminant purpura within 24 h of the onset. High-dose vasopressor and antibiotic administration failed to alter his status and he died 3 days after the onset of symptoms. V. vulnificus was isolated from blood, skin and nasal discharge cultures. Biotype and gene analysis of the microbe isolated identified it as Biotype 3, mainly reported in Israel in wound infections, and Genotype E, implicating an environmental isolate. These typing analyses indicated that the microbe isolated could be classified as a type with low pathogenicity. Conclusion. This case highlighted that Biotype 3 and Genotype E can also cause primary septicaemia. Although the majority of reports on Biotype 3 have been from the Middle East, this experience with the present case provided evidence that the habitat of Biotype 3 V. vulnificus has been extending to East Asia as well. PMID:29026623

  1. Modeling the Carbon Implications of Ecologically Based Forest Management

    DTIC Science & Technology

    2015-08-20

    richness across an environmental gradient in a fire-dependent ecosystem. American Journal of Botany 88, 2119-2128. Kolb, T.E., and J.E. Stone. 2000...litter. Canadian Journal of Botany 61(3):872-879 Loudermilk, E.L., Cropper, W.P., Mitchell, R.J., Lee, H., 2011. Longleaf pine (Pinus palustris) and

  2. Modeling the Carbon Implications of Ecologically-Based Forest Management

    DTIC Science & Technology

    2015-08-01

    richness across an environmental gradient in a fire-dependent ecosystem. American Journal of Botany 88, 2119-2128. Kolb, T.E., and J.E. Stone. 2000...litter. Canadian Journal of Botany 61(3):872-879 Loudermilk, E.L., Cropper, W.P., Mitchell, R.J., Lee, H., 2011. Longleaf pine (Pinus palustris) and

  3. Detection limits of quantitative and digital PCR assays and their influence in presence-absence surveys of environmental DNA

    USGS Publications Warehouse

    Hunter, Margaret; Dorazio, Robert M.; Butterfield, John S.; Meigs-Friend, Gaia; Nico, Leo; Ferrante, Jason A.

    2017-01-01

    A set of universal guidelines is needed to determine the limit of detection (LOD) in PCR-based analyses of low concentration DNA. In particular, environmental DNA (eDNA) studies require sensitive and reliable methods to detect rare and cryptic species through shed genetic material in environmental samples. Current strategies for assessing detection limits of eDNA are either too stringent or subjective, possibly resulting in biased estimates of species’ presence. Here, a conservative LOD analysis grounded in analytical chemistry is proposed to correct for overestimated DNA concentrations predominantly caused by the concentration plateau, a nonlinear relationship between expected and measured DNA concentrations. We have used statistical criteria to establish formal mathematical models for both quantitative and droplet digital PCR. To assess the method, a new Grass Carp (Ctenopharyngodon idella) TaqMan assay was developed and tested on both PCR platforms using eDNA in water samples. The LOD adjustment reduced Grass Carp occupancy and detection estimates while increasing uncertainty – indicating that caution needs to be applied to eDNA data without LOD correction. Compared to quantitative PCR, digital PCR had higher occurrence estimates due to increased sensitivity and dilution of inhibitors at low concentrations. Without accurate LOD correction, species occurrence and detection probabilities based on eDNA estimates are prone to a source of bias that cannot be reduced by an increase in sample size or PCR replicates. Other applications also could benefit from a standardized LOD such as GMO food analysis, and forensic and clinical diagnostics.

  4. Ecology-centered experiences among children and adolescents: A qualitative and quantitative analysis

    NASA Astrophysics Data System (ADS)

    Orton, Judy

    The present research involved two studies that considered ecology-centered experiences (i.e., experiences with living things) as a factor in children's environmental attitudes and behaviors and adolescents' ecological understanding. The first study (Study 1) examined how a community garden provides children in an urban setting the opportunity to learn about ecology through ecology-centered experiences. To do this, I carried out a yearlong ethnographic study at an urban community garden located in a large city in the Southeastern United States. Through participant observations and informal interviews of community garden staff and participants, I found children had opportunities to learn about ecology through ecology-centered experiences (e.g., interaction with animals) along with other experiences (e.g., playing games, reading books). In light of previous research that shows urban children have diminished ecological thought---a pattern of thought that privileges the relationship between living things---because of their lack of ecology-centered experiences (Coley, 2012), the present study may have implications for urban children to learn about ecology. As an extension of Study 1, I carried out a second study (Study 2) to investigate how ecology-centered experiences contribute to adolescents' environmental attitudes and behaviors in light of other contextual factors, namely environmental responsibility support, ecological thought, age and gender. Study 2 addressed three research questions. First, does ecological thought---a pattern of thought that privileges the relationship between living things---predict environmental attitudes and behaviors (EAB)? Results showed ecological thought did not predict EAB, an important finding considering the latent assumptions of previous research about the relationship between these two factors (e.g., Brugger, Kaiser, & Roczen, 2011). Second, do two types of contextual support, ecology-centered experiences (i.e., experiences with living things) and environmental responsibility support (i.e., support through the availability of environmentally responsible models) predict EAB? As predicted, results showed that ecology-centered experiences predicted EAB; yet, when environmental responsibility support was taken into consideration, ecology-centered experiences no longer predicted EAB. These findings suggested environmental responsibility support was a stronger predictor than ecology-centered experiences. Finally, do age and gender predict EAB? Consistent with previous research (e.g., Alp, Ertepiner, Tekkaya, & Yilmaz, 2006), age and gender significantly predicted EAB.

  5. Comparing efficiency of American Fisheries Society standard snorkeling techniques to environmental DNA sampling techniques

    USGS Publications Warehouse

    Ulibarri, Roy M.; Bonar, Scott A.; Rees, Christopher B.; Amberg, Jon J.; Ladell, Bridget; Jackson, Craig

    2017-01-01

    Analysis of environmental DNA (eDNA) is an emerging technique used to detect aquatic species through water sampling and the extraction of biological material for amplification. Our study compared the efficacy of eDNA methodology to American Fisheries Society (AFS) standard snorkeling surveys with regard to detecting the presence of rare fish species. Knowing which method is more efficient at detecting target species will help managers to determine the best way to sample when both traditional sampling methods and eDNA sampling are available. Our study site included three Navajo Nation streams that contained Navajo Nation Genetic Subunit Bluehead Suckers Catostomus discobolus and Zuni Bluehead Suckers C. discobolus yarrowi. We first divided the entire wetted area of streams into consecutive 100-m reaches and then systematically selected 10 reaches/stream for snorkel and eDNA surveys. Surface water samples were taken in 10-m sections within each 100-m reach, while fish presence was noted via snorkeling in each 10-m section. Quantitative PCR was run on each individual water sample in quadruplicate to test for the presence or absence of the target species. With eDNA sampling techniques, we were able to positively detect both species in two out of the three streams. Snorkeling resulted in positive detection of both species in all three streams. In streams where the target species were detected with eDNA sampling, snorkeling detected fish at 11–29 sites/stream, whereas eDNA detected fish at 3–12 sites/stream. Our results suggest that AFS standard snorkeling is more effective than eDNA for detecting target fish species. To improve our eDNA procedures, the amount of water collected and tested should be increased. Additionally, filtering water on-site may improve eDNA techniques for detecting fish. Future research should focus on standardization of eDNA sampling to provide a widely operational sampling tool.

  6. Niche and neutral processes both shape community structure in parallelized, aerobic, single carbon-source enrichments

    DOE Data Explorer

    Flynn, Theodore M.; Koval, Jason C.; Greenwald, Stephanie M.; Owens, Sarah M.; Kemner, Kenneth M.; Antonopoulos, Dionysios A.

    2017-01-01

    We present DNA sequence data in FASTA-formatted files from aerobic environmental microcosms inoculated with a sole carbon source. DNA sequences are of 16S rRNA genes present in DNA extracted from each microcosm along with the environmental samples (soil, water) used to inoculate them. These samples were sequenced using the Illumina MiSeq platform at the Environmental Sample Preparation and Sequencing Facility at Argonne National Laboratory. This data is compatible with standard microbiome analysis pipelines (e.g., QIIME, mothur, etc.).

  7. δ18O analysis of individual carbohydrates - a new method for GC-pyrolysis-IRMS

    NASA Astrophysics Data System (ADS)

    Lehmann, Marco M.; Fischer, Maria; Zech, Michael; Siegwolf, Rolf T. W.; Saurer, Matthias

    2015-04-01

    Measuring the oxygen isotopic composition (δ18O) of various plant tissues is a widely used tool to investigate biochemical and physiological processes. While we have a good understanding about the hydrological cycle in plants with an evaporative enrichment in 18O in leaf water, we still lack knowledge about the biochemical link between the oxygen atoms in leaf water, leaf assimilates, and stem cellulose and associated isotope fractionations. Especially, the influence of different environmental factors on δ18O of individual carbohydrates (i.e. sugars) and thus on δ18O of cellulose is not fully resolved. A better understanding of these processes may improve climatic reconstructions of tree-ring studies about past environmental conditions. However, further progress in this topic is limited since a precise and reliable method to determine δ18O of individual sugars has not been available yet. With our new approach we attempt to overcome this issue by establishing a new methylation derivatization method suitable for GC-pyrolysis -IRMS. A methyl group (CH3) was thereby added to all hydroxyl groups of a sugar (e.g., glucose, fructose, and sucrose) during a catalyzed one-pot reaction overnight in acetonitrile with methyl iodide (CH3-I) and silver oxide, making them amenable for GC analysis. First results show a very good precision for δ18O of sucrose, but also δ18O of other high-abundant sugars such as glucose and fructose could be measured for the first time. We successfully analyzed a standard mix of all three sugars and determined various other carbohydrates not only related to plant sciences (e.g. mannitol, lactose), showing promising δ18O results. First tests with real plant samples were performed to make this method available for determining δ18O of individual carbohydrates of diverse plant tissues. In future, this new methylation derivatization method should allow us analyzing plant samples of different field sites and of lab experiments to investigate the link between leaf sugars and stem cellulose, as well as the influence of environmental factors on δ18O of individual carbohydrates in plants, but may be applied also in other research fields working on food quality or on medical applications.

  8. 76 FR 65746 - Notice of Availability of Joint Final Environmental Impact Statement/Final Environmental Impact...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-10-24

    ... Boulevard. The project will consist of up to 128 wind turbines (1.5 to 3.0 MW each) with a generating... Statement/Final Environmental Impact Report for the Tule Wind Project, California, and Notice of Intent To... Final Environmental Impact Report (EIR) as a joint environmental analysis document for Tule Wind, LLC's...

  9. Environmental Analysis of Lake Pontchartrain, Louisiana, Its Surrounding Wetlands, and Selected Land Uses. Volume 1.

    DTIC Science & Technology

    1980-02-01

    M. Darnell,* Richard W. Heard,* Robert C. Cashner,* and Olivia House* e Graduate Modeling Robert E. Hinchee and Linda A. Deegan Students Grassbeds...James H. Stone, B. T. Gael, Linda A. Deegan , Robert E. Hinchee, John W. Day, Jr., Leonard M. Bahr, Jr., and R. E. Turner R. C. Cashner is affiliated with...Sciences Linda A. Deegan , Graduate Assistant David D. Dow, Research Associate III Nancy A. Drummond, Graduate Assistant Marion Fannaly, Research Associate

  10. What weight should be assigned to future environmental impacts? A probabilistic cost benefit analysis using recent advances on discounting.

    PubMed

    Almansa, Carmen; Martínez-Paz, José M

    2011-03-01

    Cost-benefit analysis is a standard methodological platform for public investment evaluation. In high environmental impact projects, with a long-term effect on future generations, the choice of discount rate and time horizon is of particular relevance, because it can lead to very different profitability assessments. This paper describes some recent approaches to environmental discounting and applies them, together with a number of classical procedures, to the economic evaluation of a plant for the desalination of irrigation return water from intensive farming, aimed at halting the degradation of an area of great ecological value, the Mar Menor, in South Eastern Spain. A Monte Carlo procedure is used in four CBA approaches and three time horizons to carry out a probabilistic sensitivity analysis designed to integrate the views of an international panel of experts in environmental discounting with the uncertainty affecting the market price of the project's main output, i.e., irrigation water for a water-deprived area. The results show which discounting scenarios most accurately estimate the socio-environmental profitability of the project while also considering the risk associated with these two key parameters. The analysis also provides some methodological findings regarding ways of assessing financial and environmental profitability in decisions concerning public investment in the environment. Copyright © 2010 Elsevier B.V. All rights reserved.

  11. Look@NanoSIMS--a tool for the analysis of nanoSIMS data in environmental microbiology.

    PubMed

    Polerecky, Lubos; Adam, Birgit; Milucka, Jana; Musat, Niculina; Vagner, Tomas; Kuypers, Marcel M M

    2012-04-01

    We describe an open-source freeware programme for high throughput analysis of nanoSIMS (nanometre-scale secondary ion mass spectrometry) data. The programme implements basic data processing and analytical functions, including display and drift-corrected accumulation of scanned planes, interactive and semi-automated definition of regions of interest (ROIs), and export of the ROIs' elemental and isotopic composition in graphical and text-based formats. Additionally, the programme offers new functions that were custom-designed to address the needs of environmental microbiologists. Specifically, it allows manual and automated classification of ROIs based on the information that is derived either from the nanoSIMS dataset itself (e.g. from labelling achieved by halogen in situ hybridization) or is provided externally (e.g. as a fluorescence in situ hybridization image). Moreover, by implementing post-processing routines coupled to built-in statistical tools, the programme allows rapid synthesis and comparative analysis of results from many different datasets. After validation of the programme, we illustrate how these new processing and analytical functions increase flexibility, efficiency and depth of the nanoSIMS data analysis. Through its custom-made and open-source design, the programme provides an efficient, reliable and easily expandable tool that can help a growing community of environmental microbiologists and researchers from other disciplines process and analyse their nanoSIMS data. © 2012 Society for Applied Microbiology and Blackwell Publishing Ltd.

  12. Key genes and pathways in measles and their interaction with environmental chemicals

    PubMed Central

    Zhang, Rongqiang; Jiang, Hualin; Li, Fengying; Su, Ning; Ding, Yi; Mao, Xiang; Ren, Dan; Wang, Jing

    2018-01-01

    The aim of the present study was to explore key genes that may have a role in the pathology of measles virus infection and to clarify the interaction networks between environmental factors and differentially expressed genes (DEGs). After screening the database of the Gene Expression Omnibus of the National Center for Biotechnology Information, the dataset GSE5808 was downloaded and analyzed. A global normalization method was performed to minimize data inconsistencies and heterogeneity. DEGs during different stages of measles virus infection were explored using R software (v3.4.0). Gene Ontology and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis of the DEGs were performed using Cytoscape 3.4.0 software. A protein-protein interaction (PPI) network of the DEGs was obtained from the STRING database v9.05. A total of 43 DEGs were obtained from four analyzed sample groups, including 10 highly expressed genes and 33 genes with decreased expression. The most enriched pathways based on KEGG analysis were fatty acid elongation, cytokine-cytokine receptor interaction and RNA degradation. The genes mentioned in the PPI network were mainly associated with protein binding and chemokine activity. A total of 219 chemicals were identified that may, jointly or on their own, interact with the 6 DEGs between the control group and patients with measles (at hospital entry), including benzo(a)pyrene (BaP) and tetrachlorodibenzodioxin (TCDD). In conclusion, the present study revealed that chemokines and environmental chemicals, e.g. BaP and TCDD, may affect the development of measles. PMID:29805511

  13. Negative Ion Chemical Ionization Mass Spectrometry for the Analysis of 3,5,6-trichloro-2-pyridinol in Saliva of Rats Exposed to Chlorpyrifos

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Campbell, James A.; Timchalk, Chuck; Kousba, Ahmed A.

    2005-05-01

    Organophosphorus (OP) insecticides (e.g. chlorpyrifos) are widely used in a variety of applications, and the potential exists for significant occupational and environmental exposures. They have been associated with more occupational poisoning cases than any other class of insecticides. One of the best approaches for accurately assessing human dosimetry and determining risk from both occupational and environmental exposure is biomonitoring. Biological matrices such as blood and urine have been routinely used for biomonitoring; however, other matrices such as saliva represent a simple and readily obtainable fluid. As a result, saliva has been suggested as an alternative biological matrix for the evaluationmore » of a broad range of biomarkers such as environmental contaminants, drugs of abuse, hormones, chemotherapeutics, heavy metals, and pesticides. Chlorpyrifos (CPF), and its major metabolite, 3,5,6-trichloro-2-pyridinol (TCP), have been quantified in urine and blood as a biomarker for exposure to OP insecticides. The purpose of this study was to develop an analytical approach for detecting and quantitating the levels of TCP in saliva obtained from rats exposed to CPF and to evaluate the potential of saliva as a non-invasive biomonitoring matrix. Adult male rats were administered CPF, and blood and saliva were humanely collected for analysis of TCP and CPF. TCP was detected and quantitated in saliva using negative ion chemical ionization mass spectrometry with selected ion monitoring. Initial results indicate that saliva may be potentially utilized as a non-invasive biomonitoring matrix to determine exposure to organophosphate insecticides.« less

  14. Analysis of co-eluted isomers of high-molecular weight polycyclic aromatic hydrocarbons in high performance liquid chromatography fractions via solid-phase nanoextraction and time-resolved Shpol'skii spectroscopy.

    PubMed

    Wilson, Walter B; Campiglia, Andres D

    2011-09-28

    We present an accurate method for the determination of isomers of high-molecular weight polycyclic aromatic hydrocarbons co-eluted in HPLC fractions. The feasibility of this approach is demonstrated with two isomers of molecular weight 302 with identical mass fragmentation patterns, namely dibenzo[a,i]pyrene and naphtho[2,3-a]pyrene. Qualitative and quantitative analysis is carried out via laser-excited time-resolved Shpol'skii spectroscopy at liquid helium temperature. Unambiguous identification of co-eluted isomers is based on their characteristic 4.2 K line-narrowed spectra in n-octane as well as their fluorescence lifetimes. Pre-concentration of HPLC fractions prior to spectroscopic analysis is performed with the aid of gold nanoparticles via an environmentally friendly procedure. In addition to the two co-eluted isomers, the analytical figures of merit of the entire procedure were evaluated with dibenzo[a,l]pyrene, dibenzo[a,h]pyrene and dibenzo[a,e]pyrene. The analytical recoveries from drinking water samples varied between 98.2±5.5 (dibenzo[a,l]pyrene) and 102.7±3.2% (dibenzo[a,i]pyrene). The limits of detection ranged from 51.1 ng L(-1) (naphtho[2,3-a]pyrene) to 154 ng L(-1) (dibenzo[a,e]pyrene). The excellent analytical figures of merit associated to its HPLC compatibility makes this approach an attractive alternative for the analysis of co-eluted isomers with identical mass spectra. Copyright © 2011 Elsevier B.V. All rights reserved.

  15. Multicriteria Decision Analysis of Material Selection of High Energy Performance Residential Building

    NASA Astrophysics Data System (ADS)

    Čuláková, Monika; Vilčeková, Silvia; Katunská, Jana; Krídlová Burdová, Eva

    2013-11-01

    In world with limited amount of energy sources and with serious environmental pollution, interest in comparing the environmental embodied impacts of buildings using different structure systems and alternative building materials will be increased. This paper shows the significance of life cycle energy and carbon perspective and the material selection in reducing energy consumption and emissions production in the built environment. The study evaluates embodied environmental impacts of nearly zero energy residential structures. The environmental assessment uses framework of LCA within boundary: cradle to gate. Designed alternative scenarios of material compositions are also assessed in terms of energy effectiveness through selected thermal-physical parameters. This study uses multi-criteria decision analysis for making clearer selection between alternative scenarios. The results of MCDA show that alternative E from materials on nature plant base (wood, straw bales, massive wood panel) present possible way to sustainable perspective of nearly zero energy houses in Slovak republic

  16. The NPOESS Preparatory Project Science Data Segment (SDS) Data Depository and Distribution Element (SD3E) System Architecture

    NASA Technical Reports Server (NTRS)

    Ho, Evelyn L.; Schweiss, Robert J.

    2008-01-01

    The National Polar-orbiting Operational Environmental Satellite System (NPOESS) Preparatory Project (NPP) Science Data Segment (SDS) will make daily data requests for approximately six terabytes of NPP science products for each of its six environmental assessment elements from the operational data providers. As a result, issues associated with duplicate data requests, data transfers of large volumes of diverse products, and data transfer failures raised concerns with respect to the network traffic and bandwidth consumption. The NPP SDS Data Depository and Distribution Element (SD3E) was developed to provide a mechanism for efficient data exchange, alleviate duplicate network traffic, and reduce operational costs.

  17. Research gaps related to the environmental impacts of electronic cigarettes.

    PubMed

    Chang, Hoshing

    2014-05-01

    To consider the research gaps related to the environmental impacts of electronic cigarettes due to their manufacture, use and disposal. Literature searches were conducted through December 2013. Studies were included in this review if they related to the environmental impacts of e-cigarettes. Scientific information on the environmental impacts of e-cigarette manufacturing, use and disposal is very limited. No studies formally evaluated the environmental impacts of the manufacturing process or disposal of components, including batteries. Four studies evaluated potential exposure to secondhand e-cigarette aerosol, an indication of impacts on indoor air quality. A 2010 survey of six e-cigarette models found that none of the products provided disposal instructions for spent cartridges containing nicotine. Notably, some e-cigarette manufacturers claim their e-cigarettes are 'eco-friendly' or 'green', despite the lack of any supporting data or environmental impact studies. Some authors argue that such advertising may boost sales and increase e-cigarette appeal, especially among adolescents. Little is known about the environmental impacts of e-cigarettes, and a number of topics could be further elucidated by additional investigation. These topics include potential environmental impacts related to manufacturing, use and disposal. The environmental impacts of e-cigarette manufacturing will depend upon factory size and the nicotine extracting method used. The environmental impacts of e-cigarette use will include chemical and aerosol exposure in the indoor environment. The environmental impacts of disposal of e-cigarette cartridges (which contain residual nicotine) and disposal of e-cigarettes (which contain batteries) represent yet another environmental concern.

  18. Metabolic pathways for the whole community.

    PubMed

    Hanson, Niels W; Konwar, Kishori M; Hawley, Alyse K; Altman, Tomer; Karp, Peter D; Hallam, Steven J

    2014-07-22

    A convergence of high-throughput sequencing and computational power is transforming biology into information science. Despite these technological advances, converting bits and bytes of sequence information into meaningful insights remains a challenging enterprise. Biological systems operate on multiple hierarchical levels from genomes to biomes. Holistic understanding of biological systems requires agile software tools that permit comparative analyses across multiple information levels (DNA, RNA, protein, and metabolites) to identify emergent properties, diagnose system states, or predict responses to environmental change. Here we adopt the MetaPathways annotation and analysis pipeline and Pathway Tools to construct environmental pathway/genome databases (ePGDBs) that describe microbial community metabolism using MetaCyc, a highly curated database of metabolic pathways and components covering all domains of life. We evaluate Pathway Tools' performance on three datasets with different complexity and coding potential, including simulated metagenomes, a symbiotic system, and the Hawaii Ocean Time-series. We define accuracy and sensitivity relationships between read length, coverage and pathway recovery and evaluate the impact of taxonomic pruning on ePGDB construction and interpretation. Resulting ePGDBs provide interactive metabolic maps, predict emergent metabolic pathways associated with biosynthesis and energy production and differentiate between genomic potential and phenotypic expression across defined environmental gradients. This multi-tiered analysis provides the user community with specific operating guidelines, performance metrics and prediction hazards for more reliable ePGDB construction and interpretation. Moreover, it demonstrates the power of Pathway Tools in predicting metabolic interactions in natural and engineered ecosystems.

  19. Pesticide authorization in the EU-environment unprotected?

    PubMed

    Stehle, Sebastian; Schulz, Ralf

    2015-12-01

    Pesticides constitute an integral part of high-intensity European agriculture. Prior to their authorization, a highly elaborated environmental risk assessment is mandatory according to EU pesticide legislation, i.e., Regulation (EC) No. 1107/2009. However, no field data-based evaluation of the risk assessment outcome, i.e., the regulatory acceptable concentrations (RACs), and therefore of the overall protectiveness of EU pesticide regulations exists. We conducted here a comprehensive meta-analysis using peer-reviewed literature on agricultural insecticide concentrations in EU surface waters and evaluated associated risks using the RACs derived from official European pesticide registration documents. As a result, 44.7 % of the 1566 cases of measured insecticide concentrations (MICs) in EU surface waters exceeded their respective RACs. It follows that current EU pesticide regulations do not protect the aquatic environment and that insecticides threaten aquatic biodiversity. RAC exceedances were significantly higher for insecticides authorized using conservative tier-I RACs and for more recently developed insecticide classes, i.e., pyrethroids. In addition, we identified higher risks, e.g., for smaller surface waters that are specifically considered in the regulatory risk assessment schemes. We illustrate the shortcomings of the EU regulatory risk assessment using two case studies that contextualize the respective risk assessment outcomes to field exposure. Overall, our meta-analysis challenges the field relevance and protectiveness of the regulatory environmental risk assessment conducted for pesticide authorization in the EU and indicates that critical revisions of related pesticide regulations and effective mitigation measures are urgently needed to substantially reduce the environmental risks arising from agricultural insecticide use.

  20. Cork-based activated carbons as supported adsorbent materials for trace level analysis of ibuprofen and clofibric acid in environmental and biological matrices.

    PubMed

    Neng, N R; Mestre, A S; Carvalho, A P; Nogueira, J M F

    2011-09-16

    In this contribution, powdered activated carbons (ACs) from cork waste were supported for bar adsorptive micro-extraction (BAμE), as novel adsorbent phases for the analysis of polar compounds. By combining this approach with liquid desorption followed by high performance liquid chromatography with diode array detection (BAμE(AC)-LD/HPLC-DAD), good analytical performance was achieved using clofibric acid (CLOF) and ibuprofen (IBU) model compounds in environmental and biological matrices. Assays performed on 30 mL water samples spiked at the 25.0 μg L(-1) level yielded recoveries around 80% for CLOF and 95% for IBU, under optimized experimental conditions. The ACs textural and surface chemistry properties were correlated with the results obtained. The analytical performance showed good precision (<15%), suitable detection limits (0.24 and 0.78 μg L(-1) for CLOF and IBU, respectively) and good linear dynamic ranges (r(2)>0.9922) from 1.0 to 600.0 μg L(-1). By using the standard addition methodology, the application of the present approach to environmental water and urine matrices allowed remarkable performance at the trace level. The proposed methodology proved to be a viable alternative for acidic pharmaceuticals analysis, showing to be easy to implement, reliable, sensitive and requiring low sample volume to monitor these priority compounds in environmental and biological matrices. Copyright © 2011 Elsevier B.V. All rights reserved.

  1. High-Throughput Density Measurement Using Magnetic Levitation.

    PubMed

    Ge, Shencheng; Wang, Yunzhe; Deshler, Nicolas J; Preston, Daniel J; Whitesides, George M

    2018-06-20

    This work describes the development of an integrated analytical system that enables high-throughput density measurements of diamagnetic particles (including cells) using magnetic levitation (MagLev), 96-well plates, and a flatbed scanner. MagLev is a simple and useful technique with which to carry out density-based analysis and separation of a broad range of diamagnetic materials with different physical forms (e.g., liquids, solids, gels, pastes, gums, etc.); one major limitation, however, is the capacity to perform high-throughput density measurements. This work addresses this limitation by (i) re-engineering the shape of the magnetic fields so that the MagLev system is compatible with 96-well plates, and (ii) integrating a flatbed scanner (and simple optical components) to carry out imaging of the samples that levitate in the system. The resulting system is compatible with both biological samples (human erythrocytes) and nonbiological samples (simple liquids and solids, such as 3-chlorotoluene, cholesterol crystals, glass beads, copper powder, and polymer beads). The high-throughput capacity of this integrated MagLev system will enable new applications in chemistry (e.g., analysis and separation of materials) and biochemistry (e.g., cellular responses under environmental stresses) in a simple and label-free format on the basis of a universal property of all matter, i.e., density.

  2. Measurement and evaluation of the environmental noise levels in the urban areas of the city of Nis (Serbia).

    PubMed

    Prascevic, Momir R; Mihajlov, Darko I; Cvetkovic, Dragan S

    2014-02-01

    The environmental noise level represents one of the key factors of life quality in urban areas of modern cities. A continuous monitoring of the noise levels and the analysis of results have become a necessity when we discuss a possible recovery of those areas with high levels of noise pollution, and particularly, those zones which were designed for specific activities, e.g., areas around hospitals and schools. The city of Nis, Serbia, owing to the permanent long-term noise monitoring, possesses a database containing figures related to the noise levels at relevant locations in the city, which can serve as a basis for an analysis of the change of conditions, their tendencies in the future, and recognizing factors which influence the danger of noise pollution. The paper involves an analysis of the environmental noise level collected during the previous years.

  3. Temporal Changes in Rat Liver Gene Expression after Acute Cadmium and Chromium Exposure

    DTIC Science & Technology

    2015-05-19

    William E. Dennis3, Valerie C. Minarchick4, Stephen S. Leonard4, David A. Jackson3, Jonathan D. Stallings3, John A. Lewis3* 1 ORISE Postdoctoral Fellow...pharmaceutical, industrial processes or environmental contamination. Cr is extensively used for stainless steel production, PLOSONE | DOI:10.1371/journal.pone...Michael Madejczyk; Christine Baer; William Dennis; Valerie Minarchick; Stephen Leonard 5d. PROJECT NUMBER 5e. TASK NUMBER X1 5f. WORK UNIT NUMBER

  4. Life cycle assessment of metals: a scientific synthesis.

    PubMed

    Nuss, Philip; Eckelman, Matthew J

    2014-01-01

    We have assembled extensive information on the cradle-to-gate environmental burdens of 63 metals in their major use forms, and illustrated the interconnectedness of metal production systems. Related cumulative energy use, global warming potential, human health implications and ecosystem damage are estimated by metal life cycle stage (i.e., mining, purification, and refining). For some elements, these are the first life cycle estimates of environmental impacts reported in the literature. We show that, if compared on a per kilogram basis, the platinum group metals and gold display the highest environmental burdens, while many of the major industrial metals (e.g., iron, manganese, titanium) are found at the lower end of the environmental impacts scale. If compared on the basis of their global annual production in 2008, iron and aluminum display the largest impacts, and thallium and tellurium the lowest. With the exception of a few metals, environmental impacts of the majority of elements are dominated by the purification and refining stages in which metals are transformed from a concentrate into their metallic form. Out of the 63 metals investigated, 42 metals are obtained as co-products in multi output processes. We test the sensitivity of varying allocation rationales, in which the environmental burden are allocated to the various metal and mineral products, on the overall results. Monte-Carlo simulation is applied to further investigate the stability of our results. This analysis is the most comprehensive life cycle comparison of metals to date and allows for the first time a complete bottom-up estimate of life cycle impacts of the metals and mining sector globally. We estimate global direct and indirect greenhouse gas emissions in 2008 at 3.4 Gt CO2-eq per year and primary energy use at 49 EJ per year (9.5% of global use), and report the shares for all metals to both impact categories.

  5. Life Cycle Assessment of Metals: A Scientific Synthesis

    PubMed Central

    Nuss, Philip; Eckelman, Matthew J.

    2014-01-01

    We have assembled extensive information on the cradle-to-gate environmental burdens of 63 metals in their major use forms, and illustrated the interconnectedness of metal production systems. Related cumulative energy use, global warming potential, human health implications and ecosystem damage are estimated by metal life cycle stage (i.e., mining, purification, and refining). For some elements, these are the first life cycle estimates of environmental impacts reported in the literature. We show that, if compared on a per kilogram basis, the platinum group metals and gold display the highest environmental burdens, while many of the major industrial metals (e.g., iron, manganese, titanium) are found at the lower end of the environmental impacts scale. If compared on the basis of their global annual production in 2008, iron and aluminum display the largest impacts, and thallium and tellurium the lowest. With the exception of a few metals, environmental impacts of the majority of elements are dominated by the purification and refining stages in which metals are transformed from a concentrate into their metallic form. Out of the 63 metals investigated, 42 metals are obtained as co-products in multi output processes. We test the sensitivity of varying allocation rationales, in which the environmental burden are allocated to the various metal and mineral products, on the overall results. Monte-Carlo simulation is applied to further investigate the stability of our results. This analysis is the most comprehensive life cycle comparison of metals to date and allows for the first time a complete bottom-up estimate of life cycle impacts of the metals and mining sector globally. We estimate global direct and indirect greenhouse gas emissions in 2008 at 3.4 Gt CO2-eq per year and primary energy use at 49 EJ per year (9.5% of global use), and report the shares for all metals to both impact categories. PMID:24999810

  6. Classifying oxidative stress by F2-isoprostane levels across human diseases: A meta-analysis.

    PubMed

    van 't Erve, Thomas J; Kadiiska, Maria B; London, Stephanie J; Mason, Ronald P

    2017-08-01

    The notion that oxidative stress plays a role in virtually every human disease and environmental exposure has become ingrained in everyday knowledge. However, mounting evidence regarding the lack of specificity of biomarkers traditionally used as indicators of oxidative stress in human disease and exposures now necessitates re-evaluation. To prioritize these re-evaluations, published literature was comprehensively analyzed in a meta-analysis to quantitatively classify the levels of systemic oxidative damage across human disease and in response to environmental exposures. In this meta-analysis, the F 2 -isoprostane, 8-iso-PGF 2α , was specifically chosen as the representative marker of oxidative damage. To combine published values across measurement methods and specimens, the standardized mean differences (Hedges' g) in 8-iso-PGF 2α levels between affected and control populations were calculated. The meta-analysis resulted in a classification of oxidative damage levels as measured by 8-iso-PGF 2α across 50 human health outcomes and exposures from 242 distinct publications. Relatively small increases in 8-iso-PGF 2α levels (g<0.8) were found in the following conditions: hypertension (g=0.4), metabolic syndrome (g=0.5), asthma (g=0.4), and tobacco smoking (g=0.7). In contrast, large increases in 8-iso-PGF 2α levels were observed in pathologies of the kidney, e.g., chronic renal insufficiency (g=1.9), obstructive sleep apnoea (g=1.1), and pre-eclampsia (g=1.1), as well as respiratory tract disorders, e.g., cystic fibrosis (g=2.3). In conclusion, we have established a quantitative classification for the level of 8-iso-PGF 2α generation in different human pathologies and exposures based on a comprehensive meta-analysis of published data. This analysis provides knowledge on the true involvement of oxidative damage across human health outcomes as well as utilizes past research to prioritize those conditions requiring further scrutiny on the mechanisms of biomarker generation. Copyright © 2017. Published by Elsevier B.V.

  7. Natural Time Analysis and Complex Networks

    NASA Astrophysics Data System (ADS)

    Sarlis, Nicholas; Skordas, Efthimios; Lazaridou, Mary; Varotsos, Panayiotis

    2013-04-01

    Here, we review the analysis of complex time series in a new time domain, termed natural time, introduced by our group [1,2]. This analysis conforms to the desire to reduce uncertainty and extract signal information as much as possible [3]. It enables [4] the distinction between the two origins of self-similarity when analyzing data from complex systems, i.e., whether self-similarity solely results from long-range temporal correlations (the process's memory only) or solely from the process's increments infinite variance (heavy tails in their distribution). Natural time analysis captures the dynamical evolution of a complex system and identifies [5] when the system enters a critical stage. Hence, this analysis plays a key role in predicting forthcoming catastrophic events in general. Relevant examples, compiled in a recent monograph [6], have been presented in diverse fields, including Solid State Physics [7], Statistical Physics (for example systems exhibiting self-organized criticality [8]), Cardiology [9,10], Earth Sciences [11] (Geophysics, Seismology), Environmental Sciences (e.g. see Ref. [12]), etc. Other groups have proposed and developed a network approach to earthquake events with encouraging results. A recent study [13] reveals that this approach is strengthened if we combine it with natural time analysis. In particular, we find [13,14] that the study of the spatial distribution of the variability [15] of the order parameter fluctuations, defined in natural time, provides important information on the dynamical evolution of the system. 1. P. Varotsos, N. Sarlis, and E. Skordas, Practica of Athens Academy, 76, 294-321, 2001. 2. P.A. Varotsos, N.V. Sarlis, and E.S. Skordas, Phys. Rev. E, 66, 011902 , 2002. 3. S. Abe, N.V. Sarlis, E.S. Skordas, H.K. Tanaka and P.A. Varotsos, Phys. Rev. Lett. 94, 170601, 2005. 4. P.A. Varotsos, N.V. Sarlis, E.S. Skordas, H.K. Tanaka and M.S. Lazaridou, Phys. Rev. E, 74, 021123, 2006. 5. P.Varotsos, N. V. Sarlis, E. S. Skordas, S. Uyeda, and M. Kamogawa, Proc Natl Acad Sci USA 108, 11361-11364, 2011. 6. P.A.Varotsos, N.V.Sarlis and E.S.Skordas, NATURAL TIME ANALYSIS: THE NEW VIEW OF TIME. Precursory Seismic Electric Signals, Earthquakes and other Complex Time-Series, Springer-Verlag, Berlin, Heidelberg, 2011. 7. N.V. Sarlis, P.A. Varotsos, and E.S. Skordas, Phys. Rev. B 73, 054504, 2006. 8. N. V. Sarlis, E. S. Skordas, and P. A. Varotsos, EPL 96, 28006, 2011. 9. P.A. Varotsos, N.V. Sarlis, E.S. Skordas, and M.S. Lazaridou, Appl. Phys. Lett. 91, 064106, 2007. 10. N.V. Sarlis, E.S. Skordas and P.A. Varotsos, EuroPhysics Letters EPL, 87, 18003, (2009). 11. P.A. Varotsos, N. V. Sarlis and E. S. Skordas, EPL 96 59002, 2011; 99, 59001 2012; 100 39002, 2012. 12. C.A. Varotsos and C. Tzanis, Atmospheric Environment 47, 428-434, 2012. 13. P. Varotsos, N. Sarlis, E. Skordas and M. Lazaridou, Tectonophysics (DOI 10.1016/j.tecto.2012.12.020). 14. P. Varotsos, N. Sarlis and E. Skordas, EPL to be published. 15. N. V. Sarlis, E. S. Skordas and P. A. Varotsos, EPL 91, 59001, 2010.

  8. Utilizing recycled LiFePO4 from batteries in combination with B@C3N4 and CuFe2O4 as sustainable nano-junctions for high performance degradation of atenolol.

    PubMed

    Kumar, Amit; Kumari, Anu; Sharma, Gaurav; Naushad, Mu; Ahamad, Tansir; Stadler, Florian J

    2018-06-18

    In this report recycled LiFePO 4 (LFP) from exhaust batteries was utilized to form B@C 3 N 4 /LiFePO 4 /CuFe 2 O 4 (BLC) nano-junction as a visible active photocatalyst. The junction synthesized by two routes: Using as extracted LFP and forming LFP by extracted FePO 4 and Li 2 CO 3 via in-situ deposition method. The two ternary junctions BLC and BLC (E) (utilizing as extracted LFP) were utilized for visible and solar powered degradation of beta-blocker drug Atenolol (ATL). Varying the loading of CuFe 2 O 4 (CF) which possesses lowest band gap, BLC (10%), BLC-3 (30%), BLC-5 (50%) and BLC-E (30% CF and as extracted LFP) were produced with BLC-3 exhibiting remarkable activity. The optical band gaps of BLC-3 (2.40 eV) and BLC (E) (2.46 eV) and photocurrent responses reveal high visible absorption and highly diminished recombination. 99.5% and 85.3% of ATL (20 mg L -1 ) could be degraded by BLC-3 and BLC (E) (0.3 g L -1 ) respectively in 60 min of exposure to Xe lamp and retaining of high activity in natural sunlight. Band-junction analysis, effect of scavengers and effect on teraphthalic acid and nitroblue tetrazolium reveal O 2 - and OH radicals as active species and mineralization was confirmed by liquid chromatography-mass spectrometer (LC-MS). Cyto-toxicity studies on human peripheral blood cells and effect on growth of Pseudomonas aeruginosa confirm the complete mineralization. The BLC photocatalyst is a promising multi-functional catalyst utilizing LFP (rarely used as photocatalyst) for treatment of pharmaceutical waste water and other environmental applications. Copyright © 2018 Elsevier Ltd. All rights reserved.

  9. Application of PCR to a clinical and environmental investigation of a case of equine botulism.

    PubMed

    Szabo, E A; Pemberton, J M; Gibson, A M; Thomas, R J; Pascoe, R R; Desmarchelier, P M

    1994-08-01

    PCR for the detection of botulinum neurotoxin gene types A to E was used in the investigation of a case of equine botulism. Samples from a foal diagnosed with toxicoinfectious botulism in 1985 were reanalyzed by PCR and the mouse bioassay in conjunction with an environmental survey. Neurotoxin B was detected by mouse bioassay in culture enrichments of serum, spleen, feces, and intestinal contents. PCR results compared well with mouse bioassay results, detecting type B neurotoxin genes in these samples and also in a liver sample. Other neurotoxin types were not detected by either test. Clostridium botulinum type B was shown to be prevalent in soils collected from the area in which the foal was raised. Four methods were used to test for the presence of botulinum neurotoxin-producing organisms in 66 soil samples taken within a 5-km radius: PCR and agarose gel electrophoresis (types A to E), PCR and an enzyme-linked assay (type B), hybridization of crude alkaline cell lysates with a type B-specific probe, and the mouse bioassay (all types). Fewer soil samples were positive for C. botulinum type B by the mouse bioassay (15%) than by any of the DNA-based detection systems. Hybridization of a type B-specific probe to DNA dot blots (26% of the samples were positive) and PCR-enzyme-linked assay (77% of the samples were positive) were used for the rapid analysis of large numbers of samples, with sensitivity limits of 3 x 10(6) and 3,000 cells, respectively. Conventional detection of PCR products by gel electrophoresis was the most sensitive method (300-cell limit), and in the present environmental survey, neurotoxin B genes only were detected in 94% of the samples.

  10. Application of PCR to a clinical and environmental investigation of a case of equine botulism.

    PubMed Central

    Szabo, E A; Pemberton, J M; Gibson, A M; Thomas, R J; Pascoe, R R; Desmarchelier, P M

    1994-01-01

    PCR for the detection of botulinum neurotoxin gene types A to E was used in the investigation of a case of equine botulism. Samples from a foal diagnosed with toxicoinfectious botulism in 1985 were reanalyzed by PCR and the mouse bioassay in conjunction with an environmental survey. Neurotoxin B was detected by mouse bioassay in culture enrichments of serum, spleen, feces, and intestinal contents. PCR results compared well with mouse bioassay results, detecting type B neurotoxin genes in these samples and also in a liver sample. Other neurotoxin types were not detected by either test. Clostridium botulinum type B was shown to be prevalent in soils collected from the area in which the foal was raised. Four methods were used to test for the presence of botulinum neurotoxin-producing organisms in 66 soil samples taken within a 5-km radius: PCR and agarose gel electrophoresis (types A to E), PCR and an enzyme-linked assay (type B), hybridization of crude alkaline cell lysates with a type B-specific probe, and the mouse bioassay (all types). Fewer soil samples were positive for C. botulinum type B by the mouse bioassay (15%) than by any of the DNA-based detection systems. Hybridization of a type B-specific probe to DNA dot blots (26% of the samples were positive) and PCR-enzyme-linked assay (77% of the samples were positive) were used for the rapid analysis of large numbers of samples, with sensitivity limits of 3 x 10(6) and 3,000 cells, respectively. Conventional detection of PCR products by gel electrophoresis was the most sensitive method (300-cell limit), and in the present environmental survey, neurotoxin B genes only were detected in 94% of the samples. Images PMID:7989554

  11. Analysis of melamine and analogs in complex matrices: Advances and trends.

    PubMed

    Wang, Tingting; Ma, Junfeng; Chen, Yihui; Li, Ying; Zhang, Lihua; Zhang, Yukui

    2017-01-01

    The analysis of melamine and its analogs is of increasing research interest. Owing to their high nitrogen content and low price, they were deliberately added to artificially enhance protein concentration in a number of different types of human and animal food sources. In addition, environmental water might also be contaminated by melamine due to its use in the chemical industry and the degradation of the pesticide cyromazine. Herein we provide a detailed overview of recently developed materials and techniques for the analysis of melamine and its analogs in complex matrices, especially in dairy products (e.g., milk and powdered milk) and environmental water. © 2016 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

  12. Abundance of adverse environmental conditions during critical stages of crop production in Northern Germany.

    PubMed

    Strer, Maximilian; Svoboda, Nikolai; Herrmann, Antje

    2018-01-01

    Understanding the abundance of adverse environmental conditions e.g. frost, drought, and heat during critical crop growth stages, which are assumed to be altered by climate change, is crucial for an accurate risk assessment for cropping systems. While a lengthening of the vegetation period may be beneficial, higher frequencies of heat or frost events and drought spells are generally regarded as harmful. The objective of the present study was to quantify shifts in maize and wheat phenology and the occurrence of adverse environmental conditions during critical growth stages for four regions located in the North German Plain. First, a statistical analysis of phenological development was conducted based on recent data (1981-2010). Next, these data were used to calibrate the DSSAT-CERES wheat and maize models, which were then used to run three climate projections representing the maximum, intermediate and minimum courses of climate development within the RCP 8.5 continuum during the years 2021-2050. By means of model simulation runs and statistical analysis, the climate data were evaluated for the abundance of adverse environmental conditions during critical development stages, i.e. the stages of early crop development, anthesis, sowing and harvest. Proxies for adverse environmental conditions included thresholds of low and high temperatures as well as soil moisture. The comparison of the baseline climate and future climate projections showed a significant increase in the abundance of adverse environmental conditions during critical growth stages in the future. The lengthening of the vegetation period in spring did not compensate for the increased abundance of high temperatures, e.g. during anthesis. The results of this study indicate the need to develop adaptation strategies, such as implementing changes in cropping calendars. An increase in frost risk during early development, however, reveals the limited feasibility of early sowing as a mitigation strategy. In addition, the abundance of low soil water contents that hamper important production processes such as sowing and harvest were found to increase locally.

  13. Determination of low concentrations of iron, arsenic, selenium, cadmium, and other trace elements in natural samples using an octopole collision/reaction cell equipped quadrupole-inductively coupled plasma mass spectrometer.

    PubMed

    Dial, Angela R; Misra, Sambuddha; Landing, William M

    2015-04-30

    Accurate determination of trace metals has many applications in environmental and life sciences, such as constraining the cycling of essential micronutrients in biological production and employing trace metals as tracers for anthropogenic pollution. Analysis of elements such as Fe, As, Se, and Cd is challenged by the formation of polyatomic mass spectrometric interferences, which are overcome in this study. We utilized an Octopole Collision/Reaction Cell (CRC)-equipped Quadrupole-Inductively Coupled Plasma Mass Spectrometer for the rapid analysis of small volume samples (~250 μL) in a variety of matrices containing HNO3 and/or HCl. Efficient elimination of polyatomic interferences was demonstrated by the use of the CRC in Reaction Mode (RM; H2 gas) and in Collision-Reaction Mode (CRM; H2 and He gas), in addition to hot plasma (RF power 1500 W) and cool plasma (600 W) conditions. It was found that cool plasma conditions with RM achieved the greatest signal sensitivity while maintaining low detection limits (i.e. (56) Fe in 0.44 M HNO3 has a sensitivity of 160,000 counts per second (cps)-per-1 µg L(-1) and a limit of detection (LoD) of 0.86 ng L(-1) ). The average external precision was ≤ ~10% for minor (≤10 µg L(-1) ) elements measured in a 1:100 dilution of NIST 1643e and for iron in rainwater samples under all instrumental operating conditions. An improved method has been demonstrated for the rapid multi-element analysis of trace metals that are challenged by polyatomic mass spectrometric interferences, with a focus on (56) Fe, (75) As, (78) Se and (111) Cd. This method can contribute to aqueous environmental geochemistry and chemical oceanography, as well as other fields such as forensic chemistry, agriculture, food chemistry, and pharmaceutical sciences. Copyright © 2015 John Wiley & Sons, Ltd.

  14. Carbon, land, and water footprint accounts for the European Union: consumption, production, and displacements through international trade.

    PubMed

    Steen-Olsen, Kjartan; Weinzettel, Jan; Cranston, Gemma; Ercin, A Ertug; Hertwich, Edgar G

    2012-10-16

    A nation's consumption of goods and services causes various environmental pressures all over the world due to international trade. We use a multiregional input-output model to assess three kinds of environmental footprints for the member states of the European Union. Footprints are indicators that take the consumer responsibility approach to account for the total direct and indirect effects of a product or consumption activity. We quantify the total environmental pressures (greenhouse gas emissions: carbon footprint; appropriation of biologically productive land and water area: land footprint; and freshwater consumption: water footprint) caused by consumption in the EU. We find that the consumption activities by an average EU citizen in 2004 led to 13.3 tCO(2)e of induced greenhouse gas emissions, appropriation of 2.53 gha (hectares of land with global-average biological productivity), and consumption of 179 m(3) of blue water (ground and surface water). By comparison, the global averages were 5.7 tCO(2)e, 1.23 gha, and 163 m(3) blue water, respectively. Overall, the EU displaced all three types of environmental pressures to the rest of the world, through imports of products with embodied pressures. Looking at intra-EU displacements only, the UK was the most important displacer overall, while the largest net exporters of embodied environmental pressures were Poland (greenhouse gases), France (land), and Spain (freshwater).

  15. Novel Detection of Insecticide Resistance Related P450 Genes and Transcriptome Analysis of the Hemimetabolous Pest Erthesina fullo (Thunberg) (Hemiptera: Heteroptera).

    PubMed

    Liu, Yang; Wu, Haoyang; Xie, Qiang; Bu, Wenjun

    2015-01-01

    Erthesina fullo (Thunberg, 1783) is an economically important heteropteran species in China. Since only three nucleotide sequences of this species (COI, 16S rRNA, and 18S rRNA) appear in the GenBank database so far, no analysis of the molecular mechanisms underlying E. fullo's resistance to insecticide and environmental stress has been accomplished. We reported a de novo assembled and annotated transcriptome for adult E. fullo using the Illumina sequence system. A total of 53,359,458 clean reads of 4.8 billion nucleotides (nt) were assembled into 27,488 unigenes with an average length of 750 bp, of which 17,743 (64.55%) were annotated. In the present study, we identified 88 putative cytochrome P450 sequences and analyzed the evolution of cytochrome P450 superfamilies, genes of the CYP3 clan related to metabolizing xenobiotics and plant natural compounds, in E. fullo, increasing the candidate genes for the molecular mechanisms of insecticide resistance in P450. The sequenced transcriptome greatly expands the available genomic information and could allow a better understanding of the mechanisms of insecticide resistance at the systems biology level.

  16. Fish faunal provinces of the conterminous United States of America reflect historical geography and familial composition.

    PubMed

    Matamoros, Wilfredo A; Hoagstrom, Christopher W; Schaefer, Jacob F; Kreiser, Brian R

    2016-08-01

    Although the conterminous USA has a long history of ichthyological exploration, the description of biogeographical provinces has been ad hoc. In this study we quantitatively determined fish faunal provinces and interpreted them in the context of the geological history of North America. We also evaluated influences of major river basin occupancy and contemporary environmental factors on provincial patterns. Our data set comprised 794 native fishes, which we used to generate a presence and absence matrix for U.S. Geological Survey (USGS) four-digit hydrologic units. Three nested data sets were analysed separately: primary freshwater families, continental freshwater families (including primary and secondary families) and all freshwater families (including primary, secondary and peripheral families). We used clustering analysis to delimit faunal breaks and one-way analysis of similarity (ANOSIM) to determine significance among clusters (i.e. provinces). We used an indicator-species analysis to identify species that contributed most to province delineations and a similarity-percentage (SIMPER) analysis to describe the relative influence of representatives from each category (i.e. primary, secondary, peripheral) on provincial boundaries. Lastly, we used a parsimony redundancy analysis to determine the roles of historical (i.e. major river basin) and contemporary environmental factors in shaping provinces. Analysis of the nested data sets revealed lessening provincial structure with inclusion of more families. There were 10 primary freshwater provinces, 9 continental freshwater provinces and 7 all freshwater provinces. Major basin occupancy, but not contemporary environmental factors, explained substantial variance in faunal similarities among provinces. However, provincial boundaries did not conform strictly to modern river basins, but reflected river-drainage connections of the Quaternary. Provinces represent broad-scale patterns of endemism and provide a starting point for future studies. Relative malleability of province boundaries in the continental interior highlights this region as biogeographically diverse and dynamic. Interior-core provinces of this region (Central Gulf Coastal Plains, Northern Interior) have not been recognized previously and warrant further study. © 2015 Cambridge Philosophical Society.

  17. Environmental occurrence of the enterococcal surface protein (esp) gene is an unreliable indicator of human fecal contamination

    USGS Publications Warehouse

    Byappanahalli, M.N.; Przybyla-Kelly, K.; Shively, D.A.; Whitman, R.L.

    2008-01-01

    The enterococcal surface protein (esp) gene found in Enterococcus faecalis and E. faecium has recently been explored as a marker of sewage pollution in recreational waters but its occurrence and distribution in environmental enterococci has not been well-documented. If the esp gene is found in environmental samples, there are potential implications for microbial source tracking applications. In the current study, a total of 452 samples (lake water, 100; stream water, 129; nearshore sand, 96; and backshore sand, 71; Cladophora sp. (Chlorophyta), 41; and periphyton (mostly Bacillariophyceae), 15) collected from the coastal watersheds of southern Lake Michigan were selectively cultured for enterococci and then analyzed for the esp gene by PCR, targeting E. faecalis/ E. faecium (espfs/fm) and E. faecium (espfm). Overall relative frequencies for espfs/fm and espfm were 27.4 and 5.1%. Respective percent frequency for the espfs/fm and espfm was 36 and 14% in lake water; 38.8 and 2.3% in stream water; 24 and 6.3% in nearshore sand; 0% in backshore sand; 24.4 and 0% in Cladophora sp.; and 33.3 and 0% in periphyton. The overall occurrence of both espfs/fm and espfm was significantly related (χ2 = 49, P espfs/fm increased in lake and stream water and nearshore sand. Further, E. coli and enterococci cell densities were significant predictors for espfs/fm occurrence in post-rain lake water, but espfm was not. F+ coliphage densities were not significant predictors for espfm or espfs/fm gene incidence. In summary, the differential occurrence of the esp gene in the environment suggests that it is not limited to human fecal sources and thus may weaken its use as a reliable tool in discriminating contaminant sources (i.e., human vs nonhuman).

  18. Geotechnical Study and Foundation Structural Design, Next Generation Ionosonde (NEXION) Installation, Thule Air Base, Greenland

    DTIC Science & Technology

    2015-10-01

    Richard Biagioni , Program Manager Space and Missile Systems Center (SMC) Remote Sensing Space Environmental Branch (RSSE) 1050 E. Stewart Ave...Environmental Branch (SMC/RSSE) under MIPR# F3LGWD5009G003. The technical monitor was Richard Biagioni , SMC/RSSE. The work was performed by Kevin Bjella

  19. Environmental Engineering Education (E3) in the Gulf Co-Operation Countries

    ERIC Educational Resources Information Center

    Jassim, Majeed; Coskuner, Gulnur

    2007-01-01

    The six members of the Gulf Co-operation Countries (GCC)--Bahrain, Kuwait, Oman, Qatar, Saudi Arabia and the United Arab Emirates--are facing enormous environmental challenges associated with rapid urbanisation and industrialisation, especially in the last three decades, due to its role as a global hydrocarbon energy centre. None of these…

  20. Socioeconomic dynamics of water quality in the Egyptian Nile

    NASA Astrophysics Data System (ADS)

    Malik, Maheen; Nisar, Zainab; Karakatsanis, Georgios

    2016-04-01

    The Nile River remains the most important source of freshwater for Egypt as it accounts for nearly all of the country's drinking and irrigation water. About 95% of the total population is accounted to live along the Banks of the Nile(1). Therefore, water quality deterioration in addition to general natural scarcity of water in the region(2) is the main driver for carrying out this study. What further aggravates this issue is the water conflict in the Blue Nile region. The study evaluates different water quality parameters and their concentrations in the Egyptian Nile; further assessing the temporal dynamics of water quality in the area with (a) the Environmental Kuznets Curve (EKC)(3) and (b) the Jevons Paradox (JP)(4) in order to identify water quality improvements or degradations using selected socioeconomic variables(5). For this purpose various environmental indicators including BOD, COD, DO, Phosphorus and TDS were plotted against different economic variables including Population, Gross Domestic Product (GDP), Annual Fresh Water Withdrawal and Improved Water Source. Mathematically, this was expressed by 2nd and 3rd degree polynomial regressions generating the EKC and JP respectively. The basic goal of the regression analysis is to model and highlight the dynamic trend of water quality indicators in relation to their established permissible limits, which will allow the identification of optimal future water quality policies. The results clearly indicate that the dependency of water quality indicators on socioeconomic variables differs for every indicator; while COD was above the permissible limits in all the cases despite of its decreasing trend in each case, BOD and phosphate signified increasing concentrations for the future, if they continue to follow the present trend. This could be an indication of rebound effect explained by the Jevons Paradox i.e. water quality deterioration after its improvement, either due to increase of population or intensification of economic activities related to these indicators. Keywords: Water quality dynamics, Environmental Kuznets Curve (EKC), Jevons Paradox (JP), economic variables, polynomial regressions, environmental indicators, permissible limit References: (1)Evans, A. (2007). River of Life River Nile. (2)Egypt's Water Crisis - Recipe for Disaster. (2016). [Blog] EcoMENA- Echoing Sustainability. (3)Alstine, J. and Neumayer, E. (2010). The Environmental Kuznets Curve. (4)Garrett, T. (2014). Rebound, Backfire, and the Jevons Paradox. [Blog] (5)Data.worldbank.org

  1. Phytoplankton species composition of four ecological provinces in Yellow Sea, China

    NASA Astrophysics Data System (ADS)

    Li, Xiaoqian; Feng, Yuanyuan; Leng, Xiaoyun; Liu, Haijiao; Sun, Jun

    2017-12-01

    The ecological province based on phytoplankton species composition is important to understanding the interplay between environmental parameters and phytoplankton species composition. The aim of this study was to establish phytoplankton species composition ecological pattern thus elucidate the relationship between environmental factors and the phytoplankton species composition in the ecological provinces. Phytoplankton samples were collected from 31 stations in Yellow Sea (121.00°-125.00°E, 32.00°-39.22°N) in November 2014. The samples were enumerated and identified with the Utermöhl method under an optical inverted microscope-AE2000 with magnifications of 200 × or 400 ×. In the present study, a total of 141 taxa belonging to 60 genera of 4 phyla of phytoplankton were identified, among them 101 species of 45 genera were Bacillariophyta, 36 species of 11 genera were Dinophyta, 3 species of 3 genera were Chrysophyta and 1 species of 1 genera was Chlorophyta. The study area was divided into 4 ecological provinces according to an unsupervised cluster algorithm applied to the phytoplankton biomass. A T-S (Temperature-Salinity) scatter diagram depicted with data of water temperature and salinity defined by environmental provinces matched well with the ecological provinces. The results of Canonical Correspondence Analysis (CCA) indicated that the phytoplankton species composition was mainly correlated with temperature, salinity and silicate concentration in the studied area. A method of establishing ecological provinces is useful to further understanding the environmental effects on the marine phytoplankton species composition and the consequent marine biogeochemistry.

  2. Using the agricultural environment to select better surrogates for foodborne pathogens associated with fresh produce.

    PubMed

    Cook, Kimberly L; Givan, Ethan C; Mayton, Holly M; Parekh, Rohan R; Taylor, Ritchie; Walker, Sharon L

    2017-12-04

    Despite continuing efforts to reduce foodborne pathogen contamination of fresh produce, significant outbreaks continue to occur. Identification of appropriate surrogates for foodborne pathogens facilitates relevant research to identify reservoirs and amplifiers of these contaminants in production and processing environments. Therefore, the objective of this study was to identify environmental Escherichia coli isolates from manures (poultry, swine and dairy) and surface water sources with properties similar to those of the produce associated foodborne pathogens E. coli O157:H7 and Salmonella enterica serotype Typhimurium. The most similar environmental E. coli isolates were from poultry (n=3) and surface water (n=1) sources. The best environmental E. coli surrogates had cell surface characteristics (zeta potential, hydrophobicity and exopolysaccharide composition) that were similar (i.e., within 15%) to those of S. Typhimurium and/or formed biofilms more often when grown in low nutrient media prepared from lettuce lysates (24%) than when grown on high nutrient broth (7%). The rate of attachment of environmental isolates to lettuce leaves was also similar to that of S. Typhimurium. In contrast, E. coli O157:H7, a commonly used E. coli quality control strain and swine isolates behaved similarly; all were in the lowest 10% of isolates for biofilm formation and leaf attachment. These data suggest that the environment may provide a valuable resource for selection of surrogates for foodborne pathogens. Published by Elsevier B.V.

  3. Screening Analysis for the Environmental Risk Evaluation System Task 2.1.1.2: Evaluating Effects of Stressors Fiscal Year 2011 Progress Report - Environmental Effects of Marine and Hydrokinetic Energy

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Copping, Andrea E.; Blake, Kara M.; Anderson, Richard M.

    2011-09-01

    Potential environmental effects of marine and hydrokinetic (MHK) energy development are not well understood, and yet regulatory agencies are required to make decisions in spite of substantial uncertainty about environmental impacts and their long-term consequences. An understanding of risks associated with interactions between MHK installations and aquatic receptors, including animals, habitats, and ecosystems, can help define key uncertainties and focus regulatory actions and scientific studies on interactions of most concern. As a first step in developing the Pacific Northwest National Laboratory (PNNL) Environmental Risk Evaluation System (ERES), PNNL scientists conducted a preliminary risk screening analysis on three initial MHK cases.more » During FY 2011, two additional cases were added: a tidal project in the Gulf of Maine using Ocean Renewable Power Company TidGenTM turbines and a wave project planned for the coast of Oregon using Aquamarine Oyster surge devices. Through an iterative process, the screening analysis revealed that top-tier stressors in the two FY 2011 cases were the dynamic effects of the device (e.g., strike), accidents/disasters, and effects of the static physical presence of the device (e.g., habitat alteration). Receptor interactions with these stressors at the highest tiers of risk were dominated by threatened and endangered animals. Risk to the physical environment from changes in flow regime also ranked high. Peer review of this process and results will be conducted in early FY 2012. The ERES screening analysis provides an analysis of vulnerability of environmental receptors to stressors associated with MHK installations, probability analysis is needed to determine specific risk levels to receptors. “Risk” has two components: (1) The likelihood, or “probability”, of the occurrence of a given interaction or event, and (2) the potential “consequence” if that interaction or event were to occur. During FY 2011, the ERES screening analysis focused primarily on the second component of risk, “consequence”, with focused probability analysis for interactions where data was sufficient for probability modeling. Consequence analysis provides an assessment of vulnerability of environmental receptors to stressors associated with MHK installations. Probability analysis is needed to determine specific risk levels to receptors and requires significant data inputs to drive risk models. During FY 2011, two stressor-receptor interactions were examined for the probability of occurrence. The two interactions (spill probability due to an encounter between a surface vessel and an MHK device; and toxicity from anti-biofouling paints on MHK devices) were seen to present relatively low risks to marine and freshwater receptors of greatest concern in siting and permitting MHK devices. A third probability analysis was scoped and initial steps taken to understand the risk of encounter between marine animals and rotating turbine blades. This analysis will be completed in FY 2012.« less

  4. Motivations for enrollment into the Conservation Reserve Enhancement Program in the James River Basin of South Dakota

    USGS Publications Warehouse

    Pfrimmer, Jarrett; Gigliotti, Larry M.; Stafford, Joshua; Schumann, David; Bertrand, Katie

    2017-01-01

    The Conservation Reserve Enhancement Program (CREP) targets high-priority conservation needs (e.g., water quality, wildlife habitat) by paying landowners an annual rental rate to remove environmentally sensitive or agriculturally unproductive lands from rowcrop production, and then implement conservation practices on these lands. This study examined motivations of South Dakota landowners for enrolling in the James River Basin CREP. All 517 newly enrolled landowners were mailed a questionnaire in 2014 measuring demographics, behaviors, opinions, and motivations (60% response rate). Cluster analysis of 10 motivations for enrolling identified three motivation groups (wildlife = 40%, financial = 35%, environmental = 25%). The financial group had the youngest mean age (62 years), followed by the wildlife (65) and environmental groups (68). Among respondents, 43% favored the public access requirement of this CREP with the environmental group most in favor. Understanding landowner enrollment motivations and decision criteria will assist in strategies (e.g., financial incentives, increasing yield via habitat restoration) for increasing future participation.

  5. An Examination of Long-Term Environmental-Social Dynamics in the Balkans

    NASA Astrophysics Data System (ADS)

    Kulkarni, C.; Boger, R. A.

    2015-12-01

    This study examines the interactions of environmental and social dynamics in Central Balkans over the past millennium, a period that experienced three major climatic phases (Medieval Climate Anomaly, Little Ice Age, and the warm 20th century). Meanwhile, the same period witnessed a complex human history with the emergence-rise-decline of the Ottoman Empire and subsequent socio-political events (e.g. wars, famines, migrations). Environmental datasets for the analysis include biological proxies (pollen, spores, and charcoal), geochemical signals through X-ray fluorescence (XRF), and a detailed chronology based on AMS 14C dating of two western and central Serbian lakes while social datasets include historic population data, land use, settlement patterns, and critical historic events derived from a review of the literature and local archives. Among the environmental datasets, indigenous tree and herbaceous pollen from these Central Balkans records demonstrate fluctuations in woodland-grassland dynamics whereas potassium and titanium counts obtained through XRF act as a proxy for surface erosion and clastic input into the lakes. Microscopic charcoal, cereal pollen and subordinate anthropogenic pollen (e.g. cultivated fruits and vegetables) are used to distinguish strong human impact over the landscape. These key anthropogenic indicators create a more thorough social component of the analysis in association with the social datasets. After reconstructing the individual time series for each environmental and social dataset, the two Central Balkan records are correlated in order to identify the environmental and social homogeneity and heterogeneity patterns occurring at shorter and longer timescales during the period. Results provide insights on how a region responds to social and environmental stressors and our approach demonstrates ways to integrate natural and social science system research.

  6. The Use of Structural Analysis to Develop Antecedent-Based Interventions for Students with Autism

    ERIC Educational Resources Information Center

    Stichter, Janine P.; Randolph, Jena K.; Kay, Denise; Gage, Nicholas

    2009-01-01

    Evidence continues to maintain that the use of antecedent variables (i.e., instructional practices, and environmental characteristics) increase prosocial and adaptive behaviors of students with disabilities (e.g., Kern et al. in J Appl Behav Anal 27(1):7-19, 1994; Stichter et al. in Behav Disord 30:401-418, 2005). This study extends the literature…

  7. Genetic and Environmental Influences on Pulmonary Function and Muscle Strength: The Chinese Twin Study of Aging.

    PubMed

    Tian, Xiaocao; Xu, Chunsheng; Wu, Yili; Sun, Jianping; Duan, Haiping; Zhang, Dongfeng; Jiang, Baofa; Pang, Zengchang; Li, Shuxia; Tan, Qihua

    2017-02-01

    Genetic and environmental influences on predictors of decline in daily functioning, including forced expiratory volume in 1 s (FEV1), forced vital capacity (FVC), handgrip, and five-times-sit-to-stand test (FTSST), have not been addressed in the aging Chinese population. We performed classical twin modeling on FEV1, FVC, handgrip, and FTSST in 379 twin pairs (240 MZ and 139 DZ) with median age of 50 years (40-80 years). Data were analyzed by fitting univariate and bivariate twin models to estimate the genetic and environmental influences on these measures of physical function. Heritability was moderate for FEV1, handgrip, and FTSST (55-60%) but insignificant for FVC. Only FVC showed moderate control, with shared environmental factors accounting for about 50% of the total variance. In contrast, all measures of pulmonary function and muscle strength showed modest influences from the unique environment (40-50%). Bivariate analysis showed highly positive genetic correlations between FEV1 and FVC (r G = 1.00), and moderately negative genetic correlations between FTSST and FEV1 (r G = -0.33) and FVC (r G = -0.42). FEV1 and FVC, as well as FEV1 and handgrip, displayed high common environmental correlations (r C = 1.00), and there were moderate correlations between FVC and handgrip (r C = 0.44). FEV1 and FVC showed high unique environmental correlations (r E = 0.76) and low correlations between handgrip and FEV1 (r E = 0.17), FVC (r E = 0.14), and FTSST (r E = -0.13) with positive or negative direction. We conclude that genetic factors contribute significantly to the individual differences in common indicators of daily functioning (FEV1, handgrip, and FTSST). FEV1 and FVC were genetically and environmentally correlated. Pulmonary function and FTSST may share similar sets of genes but in the negative direction. Pulmonary function and muscle strength may have a shared environmental background.

  8. Betweenness-Based Method to Identify Critical Transmission Sectors for Supply Chain Environmental Pressure Mitigation.

    PubMed

    Liang, Sai; Qu, Shen; Xu, Ming

    2016-02-02

    To develop industry-specific policies for mitigating environmental pressures, previous studies primarily focus on identifying sectors that directly generate large amounts of environmental pressures (a.k.a. production-based method) or indirectly drive large amounts of environmental pressures through supply chains (e.g., consumption-based method). In addition to those sectors as important environmental pressure producers or drivers, there exist sectors that are also important to environmental pressure mitigation as transmission centers. Economy-wide environmental pressure mitigation might be achieved by improving production efficiency of these key transmission sectors, that is, using less upstream inputs to produce unitary output. We develop a betweenness-based method to measure the importance of transmission sectors, borrowing the betweenness concept from network analysis. We quantify the betweenness of sectors by examining supply chain paths extracted from structural path analysis that pass through a particular sector. We take China as an example and find that those critical transmission sectors identified by betweenness-based method are not always identifiable by existing methods. This indicates that betweenness-based method can provide additional insights that cannot be obtained with existing methods on the roles individual sectors play in generating economy-wide environmental pressures. Betweenness-based method proposed here can therefore complement existing methods for guiding sector-level environmental pressure mitigation strategies.

  9. 40 CFR 161.175 - Certified limits.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... how the certified limits were arrived at (e.g., sample analysis, quantitative estimate based on....175 Protection of Environment ENVIRONMENTAL PROTECTION AGENCY (CONTINUED) PESTICIDE PROGRAMS DATA REQUIREMENTS FOR REGISTRATION OF ANTIMICROBIAL PESTICIDES Product Chemistry Data Requirements § 161.175...

  10. Research gaps related to the environmental impacts of electronic cigarettes

    PubMed Central

    Chang, Hoshing

    2014-01-01

    Objective To consider the research gaps related to the environmental impacts of electronic cigarettes due to their manufacture, use and disposal. Methods Literature searches were conducted through December 2013. Studies were included in this review if they related to the environmental impacts of e-cigarettes. Results Scientific information on the environmental impacts of e-cigarette manufacturing, use and disposal is very limited. No studies formally evaluated the environmental impacts of the manufacturing process or disposal of components, including batteries. Four studies evaluated potential exposure to secondhand e-cigarette aerosol, an indication of impacts on indoor air quality. A 2010 survey of six e-cigarette models found that none of the products provided disposal instructions for spent cartridges containing nicotine. Notably, some e-cigarette manufacturers claim their e-cigarettes are ‘eco-friendly’ or ‘green’, despite the lack of any supporting data or environmental impact studies. Some authors argue that such advertising may boost sales and increase e-cigarette appeal, especially among adolescents. Conclusions Little is known about the environmental impacts of e-cigarettes, and a number of topics could be further elucidated by additional investigation. These topics include potential environmental impacts related to manufacturing, use and disposal. The environmental impacts of e-cigarette manufacturing will depend upon factory size and the nicotine extracting method used. The environmental impacts of e-cigarette use will include chemical and aerosol exposure in the indoor environment. The environmental impacts of disposal of e-cigarette cartridges (which contain residual nicotine) and disposal of e-cigarettes (which contain batteries) represent yet another environmental concern. PMID:24732165

  11. Environmental Quality and the U.S. Power Sector: Air Quality, Land Use and Environmental Justice

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Massetti, Emanuele; Brown, Marilyn Ann; Lapsa, Melissa Voss

    This baseline report summarizes key environmental quality issues associated with electricity generation, transmission, distribution, and end use in the United States. Its scope includes non-greenhouse gas air pollution (i.e., sulfur dioxide, nitrogen oxides, particulate matter and hazardous air pollutants), land use, water pollution, ecological impacts, human health, and environmental justice. The discussion characterizes both current impacts and recent trends, as well as assessments of key drivers of change. For example, the air emissions section includes a quantitative decomposition analysis of the drivers of change in sulfur dioxide emissions reductions from coal-fired power plants. The report is divided into four topicalmore » sections: air emissions, land use and ecology, water quality, and environmental justice.« less

  12. Design of Standards and Labeling programs in Chile: Techno-Economic Analysis for Refrigerators

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Letschert, Virginie E.; McNeil, Michael A.; Pavon, Mariana

    2013-05-01

    Lawrence Berkeley National Laboratory is a global leader in the study of energy efficiency and its effective implementation through government policy. The Energy Analysis and Environmental Impacts Department of LBNL’s Environmental Energy Technologies Division provides technical assistance to help federal, stat e and local government agencies in the United States, and throughout the world, develop long-term strategies, policy, and programs to encourage energy efficiency in all sectors and industries. In the past, LBNL has assisted staff of various countries government agencies and their con tractors in providing methodologies to analyze cost-effectiveness of regulations and asses s overall national impacts ofmore » efficiency programs. The paper presents the work done in collaboration with the Ministry of Energy (MoE) in Chile and the Collaborative Labeling Appliance Standards Programs (CLASP) on designing a Minimum Energy Performance Standards (MEPS) and ext ending the current labeling program for refrigerators.« less

  13. Experimental Design and Bioinformatics Analysis for the Application of Metagenomics in Environmental Sciences and Biotechnology.

    PubMed

    Ju, Feng; Zhang, Tong

    2015-11-03

    Recent advances in DNA sequencing technologies have prompted the widespread application of metagenomics for the investigation of novel bioresources (e.g., industrial enzymes and bioactive molecules) and unknown biohazards (e.g., pathogens and antibiotic resistance genes) in natural and engineered microbial systems across multiple disciplines. This review discusses the rigorous experimental design and sample preparation in the context of applying metagenomics in environmental sciences and biotechnology. Moreover, this review summarizes the principles, methodologies, and state-of-the-art bioinformatics procedures, tools and database resources for metagenomics applications and discusses two popular strategies (analysis of unassembled reads versus assembled contigs/draft genomes) for quantitative or qualitative insights of microbial community structure and functions. Overall, this review aims to facilitate more extensive application of metagenomics in the investigation of uncultured microorganisms, novel enzymes, microbe-environment interactions, and biohazards in biotechnological applications where microbial communities are engineered for bioenergy production, wastewater treatment, and bioremediation.

  14. Environmental Literacy in Teacher Training in Israel: Environmental Behavior of New Students

    ERIC Educational Resources Information Center

    Goldman, Daphne; Yavetz, Bela; Pe'er, Sara

    2006-01-01

    The authors measured the level of environmental behavior of new students in 3 major teacher-training colleges in Israel and investigated the relationship between behavior and background factors. Factor analysis of students' responses resulted in grouping of environmental behavior items into 6 categories that represent increasing levels of…

  15. Integration of GC-MSD and ER-Calux® assay into a single protocol for determining steroid estrogens in environmental samples.

    PubMed

    Avberšek, Miha; Žegura, Bojana; Filipič, Metka; Heath, Ester

    2011-11-01

    There are many published studies that use either chemical or biological methods to investigate steroid estrogens in the aquatic environment, but rarer are those that combine both. In this study, gas chromatography with mass selective detection (GC-MSD) and the ER-Calux(®) estrogenicity assay were integrated into a single protocol for simultaneous determination of natural (estrone--E1, 17β-estradiol--E2, estriol--E3) and synthetic (17α-ethinylestradiol--EE2) steroid estrogens concentrations and the total estrogenic potential of environmental samples. For integration purposes, several solvents were investigated and the commonly used dimethyl sulphoxide (DMSO) in the ER-Calux(®) assay was replaced by ethyl acetate, which is more compatible with gas chromatography and enables the same sample to be analysed by both GC-MSD and the ER-Calux(®) assay. The integrated protocol was initially tested using a standard mixture of estrogens. The results for pure standards showed that the estrogenicity calculated on the basis of GC-MSD and the ER-Calux(®) assay exhibited good correlation (r(2)=0.96; α=0.94). The result remained the same when spiked waste water extracts were tested (r(2)=0.92, α=1.02). When applied to real waste water influent and effluent samples the results proved (r(2)=0.93; α=0.99) the applicability of the protocol. The main advantages of this newly developed protocol are simple sample handling for both methods, and reduced material consumption and labour. In addition, it can be applied as either a complete or sequential analysis where the ER-Calux(®) assay is used as a pre-screening method prior to the chemical analysis. Copyright © 2011 Elsevier B.V. All rights reserved.

  16. Validation of a Chinese version of the stress overload scale-short and its use as a screening tool for mental health status.

    PubMed

    Duan, Wenjie; Mu, Wenlong

    2018-02-01

    Although stress emerges when environmental demands exceed personal resources, existing measurement methods for stress focus only on one aspect. The newly-developed Short Stress Overload Scale (SOS-S) assesses the extent of stress by assessing both event load (i.e., environmental demands) and personal vulnerability (i.e., personal resources). The present study was designed to evaluate the psychometric properties of the Chinese version of Stress Overload Scale-Short (SOS-SC), and further examine its roles in screening mental health status. A total of 1364 participants were recruited from communities and colleges for scale validation. Reliabilities were good throughout the subsamples (ω > 0.80). Confirmatory factor analysis indicated the acceptable goodness-of-fit for the two-factor correlated model (Sample 1: 560 community residents). Multi-group confirmatory factor analysis confirmed measurement invariance across community residents (Sample 1) and college students (Sample 2 and Sample 3). Criterion validity and convergent validity were established (Sample 2: 554 college students). Latent moderated structural equations demonstrated that the relationship between SOS-SC and depression is moderated by social support (Sample 2), further validating the SOS-SC. In addition, the SOS-SC effectively screened individuals in a population at different levels of mental health status (i.e., "at risk" vs. "at low risk" for depression symptoms and/or wellbeing). The SOS-SC exhibits acceptable psychometric properties in the Chinese context. That said, the two aspects of stress can be differentiated by the Chinese context, therefore, the SOS-SC can be used to measure stress and screen mental health status among the Chinese population, and monitor and evaluate health-promoting interventions.

  17. The influence of soil pH and humus content on received by Mehlich 3 method nutrients analysis results

    NASA Astrophysics Data System (ADS)

    Tonutare, Tonu; Krebstein, Kadri; Rodima, Ako; Kõlli, Raimo; Künnapas, Allan; Rebane, Jaanus; Penu, Priit; Vennik, Kersti; Soobik, Liina

    2015-04-01

    Soils provide vital ecosystem functions, playing an important role in our economy and in healthy living environment. However, soils are increasingly degrading in Europe and at the global level. Knowledge about the content of major plant available nutrients, i.e. calcium, magnesium, potassium and phosphorus, plays an important role in the sustainable soil management. Mobility of nutrients depends directly on the environmental conditions, two of the most important factors are the pH and organic matter content. Therefore it is essential to have correct information about the content and behaviour of the above named elements in soil, both from the environmental and agronomical viewpoint. During the last decades several extracting solutions which are suitable for the evaluation of nutrient status of soils have been developed for this purpose. One of them is called Mehlich 3 which is widely used in USA, Canada and some European countries (e.g. Estonia, Czech Republic) because of its suitability to extract several major plant nutrients from the soil simultaneously. There are several different instrumental methods used for the analysis of nutrient elements in the soil extract. Potassium, magnesium and calcium are widely analysed by the AAS (atomic absorption spectroscopic) method or by the ICP (inductively coupled plasma) spectroscopic methods. Molecular spectroscopy and ICP spectroscopy were used for the phosphorus determination. In 2011 a new multielemental instrumental method MP-AES (microwave plasma atomic emission spectroscopy) was added to them. Due to its lower detection limits and multielemental character, compared with AAS, and lower exploitation costs, compared with ICP, the MP-AES has a good potential to achieve a leading position in soil nutrient analysis in the future. The objective of this study was to investigate: (i) the impact of soil pH and humus content and (ii) applicability of MP-AES instrumental method for the determination of soil nutrients extracted according to Mehlich 3. For the experiment 100 soil samples with different content of organic matter and pH were used. The determination of Ca, Mg, K and P was analysed by MP and ICP methods and additionally P was analysed molecular spectroscopically. Within the framework of the study the regressions between MP and ICP methods were created for all the analysed elements, i.e. Ca, Mg, K and P. According to MP and ICP, the relationships between the analysed soil major nutrient contents at different soil humus levels and at different pH ranges were determined for the evaluation of their impact. The optimal instrumental settings for calcium, magnesium and potassium analysis, according to Mehlich 3 using MP-AES method, are reported.

  18. Applications of a broad-spectrum tool for conservation and fisheries analysis: aquatic gap analysis

    USGS Publications Warehouse

    McKenna, James E.; Steen, Paul J.; Lyons, John; Stewart, Jana S.

    2009-01-01

    Natural resources support all of our social and economic activities, as well as our biological existence. Humans have little control over most of the physical, biological, and sociological conditions dictating the status and capacity of natural resources in any particular area. However, the most rapid and threatening influences on natural resources typically are anthropogenic overuse and degradation. In addition, living natural resources (i.e., organisms) do not respect political boundaries, but are aware of their optimal habitat and environmental conditions. Most organisms have wider spatial ranges than the jurisdictional boundaries of environmental agencies that deal with them; even within those jurisdictions, information is patchy and disconnected. Planning and projecting effects of ecological management are difficult, because many organisms, habitat conditions, and interactions are involved. Conservation and responsible resource use involves wise management and manipulation of the aspects of the environment and biological communities that can be effectively changed. Tools and data sets that provide new insights and analysis capabilities can enhance the ability of resource managers to make wise decisions and plan effective, long-term management strategies. Aquatic gap analysis has been developed to provide those benefits. Gap analysis is more than just the assessment of the match or mis-match (i.e., gaps) between habitats of ecological value and areas with an appropriate level of environmental protection (e.g., refuges, parks, preserves), as the name suggests. Rather, a Gap Analysis project is a process which leads to an organized database of georeferenced information and previously available tools to examine conservation and other ecological issues; it provides a geographic analysis platform that serves as a foundation for aquatic ecological studies. This analytical tool box allows one to conduct assessments of all habitat elements within an area of interest. Aquatic gap analysis naturally focuses on aquatic habitats. The analytical tools are largely based on specification of the species-habitat relations for the system and organism group of interest (Morrison et al. 2003; McKenna et al. 2006; Steen et al. 2006; Sowa et al. 2007). The Great Lakes Regional Aquatic Gap Analysis (GLGap) project focuses primarily on lotic habitat of the U.S. Great Lakes drainage basin and associated states and has been developed to address fish and fisheries issues. These tools are unique because they allow us to address problems at a range of scales from the region to the stream segment and include the ability to predict species specific occurrence or abundance for most of the fish species in the study area. The results and types of questions that can be addressed provide better global understanding of the ecological context within which specific natural resources fit (e.g., neighboring environments and resources, and large and small scale processes). The geographic analysis platform consists of broad and flexible geospatial tools (and associated data) with many potential applications. The objectives of this article are to provide a brief overview of GLGap methods and analysis tools, and demonstrate conservation and planning applications of those data and tools. Although there are many potential applications, we will highlight just three: (1) support for the Eastern Brook Trout Joint Venture (EBTJV), (2) Aquatic Life classification in Wisconsin, and (3) an educational tool that makes use of Google Earth (use of trade or product names does not imply endorsement by the U.S. Government) and Internet accessibility.

  19. Acceptable Risk Analysis for Abrupt Environmental Pollution Accidents in Zhangjiakou City, China.

    PubMed

    Du, Xi; Zhang, Zhijiao; Dong, Lei; Liu, Jing; Borthwick, Alistair G L; Liu, Renzhi

    2017-04-20

    Abrupt environmental pollution accidents cause considerable damage worldwide to the ecological environment, human health, and property. The concept of acceptable risk aims to answer whether or not a given environmental pollution risk exceeds a societally determined criterion. This paper presents a case study on acceptable environmental pollution risk conducted through a questionnaire survey carried out between August and October 2014 in five representative districts and two counties of Zhangjiakou City, Hebei Province, China. Here, environmental risk primarily arises from accidental water pollution, accidental air pollution, and tailings dam failure. Based on 870 valid questionnaires, demographic and regional differences in public attitudes towards abrupt environmental pollution risks were analyzed, and risk acceptance impact factors determined. The results showed females, people between 21-40 years of age, people with higher levels of education, public servants, and people with higher income had lower risk tolerance. People with lower perceived risk, low-level risk knowledge, high-level familiarity and satisfaction with environmental management, and without experience of environmental accidents had higher risk tolerance. Multiple logistic regression analysis indicated that public satisfaction with environmental management was the most significant factor in risk acceptance, followed by perceived risk of abrupt air pollution, occupation, perceived risk of tailings dam failure, and sex. These findings should be helpful to local decision-makers concerned with environmental risk management (e.g., selecting target groups for effective risk communication) in the context of abrupt environmental accidents.

  20. O-acetyltransferase gene neuO is segregated according to phylogenetic background and contributes to environmental desiccation resistance in Escherichia coli K1.

    PubMed

    Mordhorst, Ines L; Claus, Heike; Ewers, Christa; Lappann, Martin; Schoen, Christoph; Elias, Johannes; Batzilla, Julia; Dobrindt, Ulrich; Wieler, Lothar H; Bergfeld, Anne K; Mühlenhoff, Martina; Vogel, Ulrich

    2009-12-01

    Escherichia coli K1 causes disease in humans and birds. Its polysialic acid capsule can be O-acetylated via phase-variable expression of the acetyltransferase NeuO encoded by prophage CUS-3. The role of capsule O-acetylation in ecological adaptation or pathogenic invasion of E. coli K1 is largely unclear. A population genetics approach was performed to study the distribution of neuO among E. coli K1 isolates from human and avian sources. Multilocus sequence typing revealed 39 different sequence types (STs) among 183 E. coli K1 strains. The proportion of the ST95 complex (STC95) was 44%. NeuO was found in 98% of the STC95 strains, but only in 24% of other STs. Grouping of STs and prophage genotypes revealed a segregation of prophage types according to STs, suggesting coevolution of CUS-3 and the E. coli K1 host. Within the STC95, which is known to harbour both human and avian pathogenic isolates, CUS-3 genotypes were shared irrespective of the host species. Functional analysis of a variety of strain pairs revealed that NeuO-mediated K1 capsule O-acetylation enhanced desiccation resistance. In contrast, NeuO expression led to a reduced biofilm formation in biofilm positive E. coli K1 isolates. These findings suggest a delicate ecological balance of neuO'on'/'off' switching.

  1. DOE Office of Scientific and Technical Information (OSTI.GOV)

    Hettiarachchi, Ganga M.; Donner, Erica; Doelsch, Emmanuel

    To understand the biogeochemistry of nutrients and contaminants in environmental media, their speciation and behavior under different conditions and at multiple scales must be determined. Synchrotron radiation-based X-ray techniques allow scientists to elucidate the underlying mechanisms responsible for nutrient and contaminant mobility, bioavailability, and behavior. The continuous improvement of synchrotron light sources and X-ray beamlines around the world has led to a profound transformation in the field of environmental biogeochemistry and, subsequently, to significant scientific breakthroughs. Following this introductory paper, this special collection includes 10 papers that either present targeted reviews of recent advancements in spectroscopic methods that are applicablemore » to environmental biogeochemistry or describe original research studies conducted on complex environmental samples that have been significantly enhanced by incorporating synchrotron radiation-based X-ray technique(s). We believe that the current focus on improving the speciation of ultra-dilute elements in environmental media through the ongoing optimization of synchrotron technologies (e.g., brighter light sources, improved monochromators, more efficient detectors) will help to significantly push back the frontiers of environmental biogeochemistry research. As many of the relevant techniques produce extremely large datasets, we also identify ongoing improvements in data processing and analysis (e.g., software improvements and harmonization of analytical methods) as a significant requirement for environmental biogeochemists to maximize the information that can be gained using these powerful tools.« less

  2. Limiting similarity and functional diversity along environmental gradients

    USGS Publications Warehouse

    Schwilk, D.W.; Ackerly, D.D.

    2005-01-01

    Recent developments in community models emphasize the importance of incorporating stochastic processes (e.g. ecological drift) in models of niche-structured community assembly. We constructed a finite, spatially explicit, lottery model to simulate the distribution of species in a one-dimensional landscape with an underlying gradient in environmental conditions. Our framework combines the potential for ecological drift with environmentally-mediated competition for space in a heterogeneous environment. We examined the influence of niche breadth, dispersal distances, community size (total number of individuals) and the breadth of the environmental gradient on levels of species and functional trait diversity (i.e. differences in niche optima). Three novel results emerge from this model: (1) niche differences between adjacent species (e.g. limiting similarity) increase in smaller communities, because of the interaction of competitive effects and finite population sizes; (2) immigration from a regional species pool, stochasticity and niche-assembly generate a bimodal distribution of species residence times ('transient' and 'resident') under a heterogeneous environment; and (3) the magnitude of environmental heterogeneity has a U-shaped effect on diversity, because of shifts in species richness of resident vs. transient species. These predictions illustrate the potential importance of stochastic (although not necessarily neutral) processes in community assembly. ??2005 Blackwell Publishing Ltd/CNRS.

  3. Comparative Evaluation of the Etching Pattern of Er,Cr:YSGG & Acid Etching on Extracted Human Teeth-An ESEM Analysis

    PubMed Central

    Mazumdar, Dibyendu; Ranjan, Shashi; Krishna, Naveen Kumar; Kole, Ravindra; Singh, Priyankar; Lakiang, Deirimika; Jayam, Chiranjeevi

    2016-01-01

    Introduction Etching of enamel and dentin surfaces increases the surface area of the substrate for better bonding of the tooth colored restorative materials. Acid etching is the most commonly used method. Recently, hard tissue lasers have been used for this purpose. Aim The aim of the present study was to evaluate and compare the etching pattern of Er,Cr:YSGG and conventional etching on extracted human enamel and dentin specimens. Materials and Methods Total 40 extracted non-diseased teeth were selected, 20 anterior and 20 posterior teeth each for enamel and dentin specimens respectively. The sectioned samples were polished by 400 grit Silicon Carbide (SiC) paper to a thickness of 1.0 ± 0.5 mm. The enamel and dentin specimens were grouped as: GrE1 & GrD1 as control specimens, GrE2 & GrD2 were acid etched and GrE3 & GrD3 were lased. Acid etching was done using Conditioner 36 (37 % phosphoric acid) according to manufacturer instructions. Laser etching was done using Er,Cr:YSGG (Erbium, Chromium : Ytrium Scandium Gallium Garnet) at power settings of 3W, air 70% and water 20%. After surface treatment with assigned agents the specimens were analyzed under ESEM (Environmental Scanning Electron Microscope) at X1000 and X5000 magnification. Results Chi Square and Student “t” statistical analysis was used to compare smear layer removal and etching patterns between GrE2-GrE3. GrD2 and GrD3 were compared for smear layer removal and diameter of dentinal tubule opening using the same statistical analysis. Chi-square test for removal of smear layer in any of the treated surfaces i.e., GrE2-E3 and GrD2-D3 did not differ significantly (p>0.05). While GrE2 showed predominantly type I etching pattern (Chi-square=2.78, 0.05

    0.10) and GrE3 showed type III etching (Chi-square=4.50, p<0.05). The tubule diameters were measured using GSA (Gesellschaft fur Softwareentwicklung und Analytik, Germany) image analyzer and the ‘t’ value of student ‘t’ test was 18.10 which was a highly significant result (p<.001). GrD2 had a mean dentinal tubule diameter of 2.78μm and GrD3 of 1.09μm. Conclusion The present study revealed type I etching pattern after acid etching, while type III etching pattern in enamel after laser etching. The lased dentin showed preferential removal of intertubular dentin while acid etching had more effect on the peritubular dentin. No significant differences was observed in removal of smear layer between the acid etched and lased groups. Although diameter of the exposed dentinal tubules was lesser after lased treatment in comparison to acid etching, further long term in vivo studies are needed with different parameters to establish the usage of Er,Cr:YSGG as a sole etching agent. PMID:27437337

  4. Chemical evaluation of electronic cigarettes

    PubMed Central

    Cheng, Tianrong

    2014-01-01

    Objective To review the available evidence evaluating the chemicals in refill solutions, cartridges, aerosols and environmental emissions of electronic cigarettes (e-cigarettes). Methods Systematic literature searches were conducted to identify research related to e-cigarettes and chemistry using 5 reference databases and 11 search terms. The search date range was January 2007 to September 2013. The search yielded 36 articles, of which 29 were deemed relevant for analysis. Results The levels of nicotine, tobacco-specific nitrosamines (TSNAs), aldehydes, metals, volatile organic compounds (VOCs), flavours, solvent carriers and tobacco alkaloids in e-cigarette refill solutions, cartridges, aerosols and environmental emissions vary considerably. The delivery of nicotine and the release of TSNAs, aldehydes and metals are not consistent across products. Furthermore, the nicotine level listed on the labels of e-cigarette cartridges and refill solutions is often significantly different from measured values. Phenolic compounds, polycyclic aromatic hydrocarbons and drugs have also been reported in e-cigarette refill solutions, cartridges and aerosols. Varying results in particle size distributions of particular matter emissions from e-cigarettes across studies have been observed. Methods applied for the generation and chemical analyses of aerosols differ across studies. Performance characteristics of e-cigarette devices also vary across and within brands. Conclusions Additional studies based on knowledge of e-cigarette user behaviours and scientifically validated aerosol generation and chemical analysis methods would be helpful in generating reliable measures of chemical quantities. This would allow comparisons of e-cigarette aerosol and traditional smoke constituent levels and would inform an evaluation of the toxicity potential of e-cigarettes. PMID:24732157

  5. Moving environmental DNA methods from concept to practice for monitoring aquatic macroorganisms

    USGS Publications Warehouse

    Goldberg, Caren S.; Strickler, Katherine M.; Pilliod, David S.

    2015-01-01

    The discovery that macroorganisms can be detected from their environmental DNA (eDNA) in aquatic systems has immense potential for the conservation of biological diversity. This special issue contains 11 papers that review and advance the field of eDNA detection of vertebrates and other macroorganisms, including studies of eDNA production, transport, and degradation; sample collection and processing to maximize detection rates; and applications of eDNA for conservation using citizen scientists. This body of work is an important contribution to the ongoing efforts to take eDNA detection of macroorganisms from technical breakthrough to established, reliable method that can be used in survey, monitoring, and research applications worldwide. While the rapid advances in this field are remarkable, important challenges remain, including consensus on best practices for collection and analysis, understanding of eDNA diffusion and transport, and avoidance of inhibition in sample collection and processing. Nonetheless, as demonstrated in this special issue, eDNA techniques for research and monitoring are beginning to realize their potential for contributing to the conservation of biodiversity globally.

  6. Analysis of the interrelationship of energy, economy, and environment: A model of a sustainable energy future for Korea

    NASA Astrophysics Data System (ADS)

    Boo, Kyung-Jin

    The primary purpose of this dissertation is to provide the groundwork for a sustainable energy future in Korea. For this purpose, a conceptual framework of sustainable energy development was developed to provide a deeper understanding of interrelationships between energy, the economy, and the environment (E 3). Based on this theoretical work, an empirical simulation model was developed to investigate the ways in which E3 interact. This dissertation attempts to develop a unified concept of sustainable energy development by surveying multiple efforts to integrate various definitions of sustainability. Sustainable energy development should be built on the basis of three principles: ecological carrying capacity, economic efficiency, and socio-political equity. Ecological carrying capacity delineates the earth's resource constraints as well as its ability to assimilate wastes. Socio-political equity implies an equitable distribution of the benefits and costs of energy consumption and an equitable distribution of environmental burdens. Economic efficiency dictates efficient allocation of scarce resources. The simulation model is composed of three modules: an energy module, an environmental module and an economic module. Because the model is grounded on economic structural behaviorism, the dynamic nature of the current economy is effectively depicted and simulated through manipulating exogenous policy variables. This macro-economic model is used to simulate six major policy intervention scenarios. Major findings from these policy simulations were: (1) carbon taxes are the most effective means of reducing air-pollutant emissions; (2) sustainable energy development can be achieved through reinvestment of carbon taxes into energy efficiency and renewable energy programs; and (3) carbon taxes would increase a nation's welfare if reinvested in relevant areas. The policy simulation model, because it is based on neoclassical economics, has limitations such that it cannot fully account for socio-political realities (inter- and intra-generational equity) which are core feature of sustainability. Thus, alternative approaches based on qualitative analysis, such as the multi-criteria approach, will be required to complement the current policy simulation model.

  7. Frequency and risk-factors analysis of Escherichia coli O157:H7 in Bali-cattle.

    PubMed

    Suardana, I Wayan; Widiasih, Dyah Ayu; Nugroho, Widagdo Sri; Wibowo, Michael Haryadi; Suyasa, I Nyoman

    2017-08-01

    Cattle are known as the main reservoir of zoonotic agents verocytotoxin-producing Escherichia coli. These bacteria are usually isolated from calves with diarrhea and/or mucus and blood. Tolerance of these agents to the environmental conditions will strengthen of their transmission among livestock. A total of 238 cattle fecal samples from four sub-districts in Badung, Bali were used in this study. Epidemiological data observed include cattle age, sex, cattle rearing system, the source of drinking water, weather, altitude, and type of cage floor, the cleanliness of cage floor, the slope of cage floor, and the level of cattle cleanliness. The study was initiated by culturing of samples onto eosin methylene blue agar, then Gram stained, and tested for indole, methyl-red, voges proskauer, and citrate, Potential E.coli isolates were then cultured onto sorbitol MacConkey agar, and further tested using O157 latex agglutination test and H7 antisera. Molecular identification was performed by analysis of the 16S rRNA gene, and epidemiological data was analyzed using STATA 12.0 software. The results showed, the prevalence of E. coli O157:H7 in cattle at Badung regency was 6.30% (15/238) covering four sub districts i.e. Petang, Abiansemal, Mengwi, and Kuta which their prevalence was 8.62%(5/58), 10%(6/60), 3.33%(2/60), and 3.33(2/60)%, respectively. The analysis of 16S rRNA gene confirmed of isolates as an E. coli O157:H7 strain with 99% similarities. Furthermore, the risk factors analysis showed that the slope of the cage floor has a highly significant effect (P<0.05) to the distribution of infection. Consequently, implementing this factor must be concerned in order to decrease of infection. Copyright © 2017 Elsevier B.V. All rights reserved.

  8. General Plan-Based Environmental Impact Analysis Process Environmental Assessment, Altus Air Force Base

    DTIC Science & Technology

    2009-11-01

    Service State Conservationist Mr. Ron L. Hillard 100 USDA, Suite 206 Stillwater OK 74074-2655 United States Fish and Wildlife Service Oklahoma Ecological ...been collected, we cannot say with certainty whether or not a given site harbors rare species or ecological communities. For this reason, if you are...Norman, Ok. 73019. For information on federally listed threatened or endangered species, contact the USFWS, Ecological Services, 9014 E. 21st

  9. Identifying Areas of Potential Wetland Hydrology in Irrigated Croplands Using Aerial Image Interpretation and Analysis of Rainfall Normality

    DTIC Science & Technology

    2016-06-01

    engineering and environmental challenges. ERDC develops innovative solutions in civil and military engineering, geospatial sciences, water resources, and... tte rn o f p ea ks , i nd ic at in g th e we t p or tio n of ea ch y ea r, fo llo we d by a s ha rp d ec lin e in to th e dr y s ea so

  10. Relations between retired agricultural land, water quality, and aquatic-community health, Minnesota River Basin

    USGS Publications Warehouse

    Christensen, Victoria G.; Lee, Kathy E.; McLees, James M.; Niemela, Scott L.

    2012-01-01

    The relative importance of agricultural land retirement on water quality and aquatic-community health was investigated in the Minnesota River Basin. Eighty-two sites, with drainage areas ranging from 4.3 to 2200 km2, were examined for nutrient concentrations, measures of aquatic-community health (e.g., fish index of biotic integrity [IBI] scores), and environmental factors (e.g., drainage area and amount of agricultural land retirement). The relation of proximity of agricultural land retirement to the stream was determined by calculating the land retirement percent in various riparian zones. Spearman's rho results indicated that IBI score was not correlated to the percentage of agricultural land retirement at the basin scale (p = 0.070); however, IBI score was correlated to retired land percentage in the 50- to 400-m riparian zones surrounding the streams (p < 0.05), indicating that riparian agricultural land retirement may have more influence on aquatic-community health than does agricultural land retirement in upland areas. Multivariate analysis of covariance and analysis of covariance models indicated that other environmental factors (such as drainage area and lacustrine and palustrine features) commonly were correlated to aquatic-community health measures, as were in-stream factors (standard deviation of water depth and substrate type). These results indicate that although agricultural land retirement is significantly related to fish communities as measured by the IBI scores, a combination of basin, riparian, and in-stream factors act together to influence IBI scores.

  11. Diversity in the architecture of ATLs, a family of plant ubiquitin-ligases, leads to recognition and targeting of substrates in different cellular environments.

    PubMed

    Aguilar-Hernández, Victor; Aguilar-Henonin, Laura; Guzmán, Plinio

    2011-01-01

    Ubiquitin-ligases or E3s are components of the ubiquitin proteasome system (UPS) that coordinate the transfer of ubiquitin to the target protein. A major class of ubiquitin-ligases consists of RING-finger domain proteins that include the substrate recognition sequences in the same polypeptide; these are known as single-subunit RING finger E3s. We are studying a particular family of RING finger E3s, named ATL, that contain a transmembrane domain and the RING-H2 finger domain; none of the member of the family contains any other previously described domain. Although the study of a few members in A. thaliana and O. sativa has been reported, the role of this family in the life cycle of a plant is still vague. To provide tools to advance on the functional analysis of this family we have undertaken a phylogenetic analysis of ATLs in twenty-four plant genomes. ATLs were found in all the 24 plant species analyzed, in numbers ranging from 20-28 in two basal species to 162 in soybean. Analysis of ATLs arrayed in tandem indicates that sets of genes are expanding in a species-specific manner. To get insights into the domain architecture of ATLs we generated 75 pHMM LOGOs from 1815 ATLs, and unraveled potential protein-protein interaction regions by means of yeast two-hybrid assays. Several ATLs were found to interact with DSK2a/ubiquilin through a region at the amino-terminal end, suggesting that this is a widespread interaction that may assist in the mode of action of ATLs; the region was traced to a distinct sequence LOGO. Our analysis provides significant observations on the evolution and expansion of the ATL family in addition to information on the domain structure of this class of ubiquitin-ligases that may be involved in plant adaptation to environmental stress.

  12. Field trip method as an effort to reveal student environmental literacy on biodiversity issue and context

    NASA Astrophysics Data System (ADS)

    Rijal, M.; Saefudin; Amprasto

    2018-05-01

    Field trip method through investigation of local biodiversity cases can give educational experiences for students. This learning activity was efforts to reveal students environmental literacy on biodiversity. The aim of study were (1) to describe the activities of students get information about the biodiversity issue and its context through field trip, (2) to describe the students findings during field trip, and (3) to reveal students environmental literacy based on pre test and post test. The research method used weak-experiment and involved 34 participants at senior high school students in Bandung-Indonesia. The research instruments for collecting data were environmental literacy test, observation sheets and questionnaire sheets for students. The analysis of data was quantitative descriptive. The results show that more than 79% of the students gave positive view for each field trip activity, i.e students activity during work (97%-100%); students activity during gather information (79%- 100%); students activity during exchange information with friend (82%-100%); and students interested to Biodiversity after field trip activity (85%-100%). Students gain knowledge about the diversity of animal vertebrate and its characteristics, the status and condition of animals, and the source of animal with the cases of animal diversity. The students environmental literacy tends to be moderate level based on test. Meanwhile, the average of the attitudes and action greater than the components of knowledge and cognitive skills.

  13. Environmental DNA reflects spatial and temporal jellyfish distribution

    PubMed Central

    Fukuda, Miho; Katsuhara, Koki R.; Fujiwara, Ayaka; Hidaka, Shunsuke; Yamamoto, Satoshi; Takahashi, Kohji; Masuda, Reiji

    2017-01-01

    Recent development of environmental DNA (eDNA) analysis allows us to survey underwater macro-organisms easily and cost effectively; however, there have been no reports on eDNA detection or quantification for jellyfish. Here we present the first report on an eDNA analysis of marine jellyfish using Japanese sea nettle (Chrysaora pacifica) as a model species by combining a tank experiment with spatial and temporal distribution surveys. We performed a tank experiment monitoring eDNA concentrations over a range of time intervals after the introduction of jellyfish, and quantified the eDNA concentrations by quantitative real-time PCR. The eDNA concentrations peaked twice, at 1 and 8 h after the beginning of the experiment, and became stable within 48 h. The estimated release rates of the eDNA in jellyfish were higher than the rates previously reported in fishes. A spatial survey was conducted in June 2014 in Maizuru Bay, Kyoto, in which eDNA was collected from surface water and sea floor water samples at 47 sites while jellyfish near surface water were counted on board by eye. The distribution of eDNA in the bay corresponded with the distribution of jellyfish inferred by visual observation, and the eDNA concentration in the bay was ~13 times higher on the sea floor than on the surface. The temporal survey was conducted from March to November 2014, in which jellyfish were counted by eye every morning while eDNA was collected from surface and sea floor water at three sampling points along a pier once a month. The temporal fluctuation pattern of the eDNA concentrations and the numbers of observed individuals were well correlated. We conclude that an eDNA approach is applicable for jellyfish species in the ocean. PMID:28245277

  14. An analysis of occupational blood lead trends in Manitoba, 1979 through 1987

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Yassi, A.; Cheang, M.; Tenenbein, M.

    1991-06-01

    While regulations for workplace lead exposure become more strict, their effectiveness in decreasing blood lead concentrations and the method by which this is attained have not been evaluated. METHODS: An analysis was conducted of 10,190 blood lead samples from employees of 10 high-risk workplaces collected in Manitoba, 1979-87, as part of regulated occupational surveillance. A significant decrease in blood lead concentrations was observed overall as well as for each individual company. A 1979 government regulation to reduce blood lead to below 3.38 mumol/L (70 micrograms/dl) was followed by a drop in blood lead concentrations; a 1983 order to reduce bloodmore » leads to below 2.90 mumol/L (60 micrograms/dl) was not followed by such a drop. Longitudinal analysis by individual workers suggested that companies were complying by use of administrative control, i.e., removing workers to lower lead areas until blood lead levels had fallen, then returning them to high lead areas. Focusing upon blood lead as the sole criterion for compliance is not effective; regulations must specifically require environmental monitoring and controls. Biological surveillance serves as 'back-up' to environmental surveillance and this database illustrates the usefulness of a comprehensive centralized surveillance system.« less

  15. Male reproductive health and environmental xenoestrogens.

    PubMed Central

    Toppari, J; Larsen, J C; Christiansen, P; Giwercman, A; Grandjean, P; Guillette, L J; Jégou, B; Jensen, T K; Jouannet, P; Keiding, N; Leffers, H; McLachlan, J A; Meyer, O; Müller, J; Rajpert-De Meyts, E; Scheike, T; Sharpe, R; Sumpter, J; Skakkebaek, N E

    1996-01-01

    Male reproductive health has deteriorated in many countries during the last few decades. In the 1990s, declining semen quality has been reported from Belgium, Denmark, France, and Great Britain. The incidence of testicular cancer has increased during the same time incidences of hypospadias and cryptorchidism also appear to be increasing. Similar reproductive problems occur in many wildlife species. There are marked geographic differences in the prevalence of male reproductive disorders. While the reasons for these differences are currently unknown, both clinical and laboratory research suggest that the adverse changes may be inter-related and have a common origin in fetal life or childhood. Exposure of the male fetus to supranormal levels of estrogens, such as diethlylstilbestrol, can result in the above-mentioned reproductive defects. The growing number of reports demonstrating that common environmental contaminants and natural factors possess estrogenic activity presents the working hypothesis that the adverse trends in male reproductive health may be, at least in part, associated with exposure to estrogenic or other hormonally active (e.g., antiandrogenic) environmental chemicals during fetal and childhood development. An extensive research program is needed to understand the extent of the problem, its underlying etiology, and the development of a strategy for prevention and intervention. Images Figure 3. A Figure 3. B Figure 3. C Figure 3. D Figure 3. E Figure 3. F PMID:8880001

  16. A Review of NCI’s Extramural Grant Portfolio: Identifying Opportunities for Future Research in Genes and Environment in Cancer

    PubMed Central

    Ghazarian, Armen A.; Simonds, Naoko I.; Bennett, Kelly; Pimentel, Camilla B.; Ellison, Gary L.; Gillanders, Elizabeth M.; Schully, Sheri D.; Mechanic, Leah E.

    2013-01-01

    Background Genetic and environmental factors jointly influence cancer risk. The National Institutes of Health (NIH) has made the study of gene-environment (GxE) interactions a research priority since the year 2000. Methods To assess the current status of GxE research in cancer, we analyzed the extramural grant portfolio of the National Cancer Institute (NCI) from Fiscal Years 2007 to 2009. Publications attributed to selected grants were also evaluated. Results From the 1,106 research grants identified in our portfolio analysis, a random sample of 450 grants (40%) was selected for data abstraction; of these, 147 (33%) were considered relevant. The most common cancer type was breast (20%, n=29), followed by lymphoproliferative (10%, n=14), colorectal (9%, n=13), melanoma/other skin (9%, n=13), and lung/upper aero-digestive tract (8%, n=12) cancers. The majority of grants were studies of candidate genes (68%, n=100) compared to genome-wide association studies (GWAS) (8%, n=12). Approximately one third studied environmental exposures categorized as energy balance (37%, n=54) or drugs/treatment (29%, n=43). From the 147 relevant grants, 108 publications classified as GxE or pharmacogenomic were identified. These publications were linked to 37 of the 147 grant applications (25%). Conclusion The findings from our portfolio analysis suggest that GxE studies are concentrated in specific areas. There is room for investments in other aspects of GxE research, including, but not limited to developing alternative approaches to exposure assessment, broadening the spectrum of cancer types investigated, and performing GxE within GWAS. Impact This portfolio analysis provides a cross-sectional review of NCI support for GxE research in cancer. PMID:23462918

  17. A review of NCI's extramural grant portfolio: identifying opportunities for future research in genes and environment in cancer.

    PubMed

    Ghazarian, Armen A; Simonds, Naoko I; Bennett, Kelly; Pimentel, Camilla B; Ellison, Gary L; Gillanders, Elizabeth M; Schully, Sheri D; Mechanic, Leah E

    2013-04-01

    Genetic and environmental factors jointly influence cancer risk. The NIH has made the study of gene-environment (GxE) interactions a research priority since the year 2000. To assess the current status of GxE research in cancer, we analyzed the extramural grant portfolio of the National Cancer Institute (NCI) from Fiscal Years 2007 to 2009. Publications attributed to selected grants were also evaluated. From the 1,106 research grants identified in our portfolio analysis, a random sample of 450 grants (40%) was selected for data abstraction; of these, 147 (33%) were considered relevant. The most common cancer type was breast (20%, n = 29), followed by lymphoproliferative (10%, n = 14), colorectal (9%, n = 13), melanoma/other skin (9%, n = 13), and lung/upper aerodigestive tract (8%, n = 12) cancers. The majority of grants were studies of candidate genes (68%, n = 100) compared with genome-wide association studies (GWAS) (8%, n = 12). Approximately one-third studied environmental exposures categorized as energy balance (37%, n = 54) or drugs/treatment (29%, n = 43). From the 147 relevant grants, 108 publications classified as GxE or pharmacogenomic were identified. These publications were linked to 37 of the 147 grant applications (25%). The findings from our portfolio analysis suggest that GxE studies are concentrated in specific areas. There is room for investments in other aspects of GxE research, including, but not limited to developing alternative approaches to exposure assessment, broadening the spectrum of cancer types investigated, and conducting GxE within GWAS. This portfolio analysis provides a cross-sectional review of NCI support for GxE research in cancer.

  18. A molecular approach for the rapid, selective and sensitive detection of Exophiala jeanselmei in environmental samples: development and performance assessment of a real-time PCR assay.

    PubMed

    Libert, X; Chasseur, C; Packeu, A; Bureau, F; Roosens, N H; De Keersmaecker, S J C

    2016-02-01

    Exophiala jeanselmei is an opportunistic pathogenic black yeast growing in humid environments such as water reservoirs of air-conditioning systems. Because this fungal contaminant could be vaporized into the air and subsequently cause health problems, its monitoring is recommended. Currently, this monitoring is based on culture and microscopic identification which are complex, sometimes ambiguous and time-demanding, i.e., up to 21 days. Therefore, molecular, culture-independent methods could be more advantageous for the monitoring of E. jeanselmei. In this study, we developed a SYBR®green real-time PCR assay based on the internal transcribed spacer 2 from the 18S ribosomal DNA complex for the specific detection of E. jeanselmei. The selectivity (100 %), PCR efficiency (95.5 %), dynamic range and repeatability of this qPCR assay were subsequently evaluated. The limit of detection for this qPCR assay was determined to be 1 copy of genomic DNA of E. jeanselmei. Finally, water samples collected from cooling reservoirs were analyzed using this qPCR assay to deliver a proof of concept for the molecular detection of E. jeanselmei in environmental samples. The results obtained by molecular analysis were compared with those of classical methods (i.e., culture and microscopic identification) used in routine analysis and were 100 % matching. This comparison demonstrated that this SYBR®green qPCR assay can be used as a molecular alternative for monitoring and routine investigation of samples contaminated by E. jeanselmei, while eliminating the need for culturing and thereby considerably decreasing the required analysis time to 2 days.

  19. Sonochemistry in environmental remediation. 1. Combinative and hybrid sonophotochemical oxidation processes for the treatment of pollutants in water.

    PubMed

    Adewuyi, Yusuf G

    2005-05-15

    Sonoprocessing is the utilization of sonic and ultrasonic waves in chemical synthesis and processes. It is a new and rapidly growing research field with broad applications in environmental engineering, green chemical synthesis, and processing. The application of this environmentally benign technique in environmental remediation is currently under active research and development. Sonochemical oxidation is effective in treating toxic effluents and reducing toxicity. However, the ultrasonic treatment is highly energy intensive since sonication is relatively inefficient with respect to total input energy and is therefore not economically attractive or feasible alone. Hence, sonochemistry has not yet received much attention as an alternative for industrial and large-scale chemical and environmental processes. One of the most interesting topics in the recent advances in sonochemistry is the possibility of double or more excitations with ultrasound and other types of energy. The coupling of ultrasound with other free energy sources (i.e., UV) or chemical oxidation utilizing H2O2, O3, or ferrous ion presents interesting and attractive approaches. Therefore, many recent efforts have been devoted to improving the efficiency of sonochemical reactions by exploiting the advantages of combinative or hybrid processes involving the simultaneous or sequential use of ultrasonic irradiation and other advanced oxidation processes, electrochemical processes, and biological treatment. This paper provides a critical review of the applications of ultrasound in environmental remediation, focusing on recent developments and unifying analysis of combinative or hybrid systems, namely, sonophotochemical oxidation processes.

  20. CProb: a computational tool for conducting conditional probability analysis.

    PubMed

    Hollister, Jeffrey W; Walker, Henry A; Paul, John F

    2008-01-01

    Conditional probability is the probability of observing one event given that another event has occurred. In an environmental context, conditional probability helps to assess the association between an environmental contaminant (i.e., the stressor) and the ecological condition of a resource (i.e., the response). These analyses, when combined with controlled experiments and other methodologies, show great promise in evaluating ecological conditions from observational data and in defining water quality and other environmental criteria. Current applications of conditional probability analysis (CPA) are largely done via scripts or cumbersome spreadsheet routines, which may prove daunting to end-users and do not provide access to the underlying scripts. Combining spreadsheets with scripts eases computation through a familiar interface (i.e., Microsoft Excel) and creates a transparent process through full accessibility to the scripts. With this in mind, we developed a software application, CProb, as an Add-in for Microsoft Excel with R, R(D)com Server, and Visual Basic for Applications. CProb calculates and plots scatterplots, empirical cumulative distribution functions, and conditional probability. In this short communication, we describe CPA, our motivation for developing a CPA tool, and our implementation of CPA as a Microsoft Excel Add-in. Further, we illustrate the use of our software with two examples: a water quality example and a landscape example. CProb is freely available for download at http://www.epa.gov/emap/nca/html/regions/cprob.

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