Using Landsat Thematic Mapper and SPOT Satellite Imagery to inventory wetland plants of the Coeur d'Alene Floodplain

Treesearch

F. M. Roberts; P. E. Gessler

2000-01-01

Landsat Thematic Mapper (TM) and SPOT Satellite Imagery were used to map wetland plant species in thc Coeur d'Alene floodplain in northern Idaho. This paper discusses the methodology used to create a wetland plant species map for the floodplain. Species mapped included common cattail (Typha latifolia); water horse-tail (Equisetum...

Invasion history of North American Canada thistle, Cirsium arvense

USDA-ARS?s Scientific Manuscript database

Canada thistle (CIRSIUM ARVENSE – Cardueae, Asteraceae) is one of the worst invasive plants worldwide. Native to Eurasia, its unintentional introduction into North America now threatens the native flora and imposes enormous agricultural losses. The goals of this study were to: (i) conduct bioclimati...

Invasion history of North American Canada thistle, Cirsium arvense

USDA-ARS?s Scientific Manuscript database

Aim Canada thistle (Cirsium arvense – Cardueae, Asteraceae) is one of the worst invasive plants worldwide. Native to Eurasia, its unintentional introduction into North America now threatens the native flora and imposes enormous agricultural losses. The goals of this study are to: (i) conduct bioclim...

Proposed Infantry Division Force (9th) Conversion; Maneuver Damage, Erosion and Natural Resources Assessment Yakima Firing Center, Washington. Volume 1. Main Text

DTIC Science & Technology

1990-08-01

dock, bulrushes (Scirpus americanus and 5._ microcarpus), water parsley (Oenanthe sarmentosa), duckweed 106 ( Lemna minor ), horsetails (Equisetum spp...particles to finer sizes as well as truncating and bisecting of aeolian land forms. b. The effects of maneuvers on the threshold are minor compared to the...Agropyron spicatum and Sandberg bluegrass (Poa sandbergii). A mixture of " minor " shrubs can also be found in this cover type, including green rabbitbush

Growth environment but not seed position on the parent plant affect seed germination of two Thlaspi arvense L. populations

USDA-ARS?s Scientific Manuscript database

Thlaspi arvense L. is a common weed found in most temperate regions throughout the world that also shows excellent potential for domestication as an oilseed crop. The complexity of T. arvense seed dormancy presently makes it difficult to manage as a weed or oilseed crop. Therefore, a better understa...

Morphometric and mechanical characteristics of Equisetum hyemale stem enhance its vibration.

PubMed

Zajączkowska, Urszula; Kucharski, Stanisław; Nowak, Zdzisław; Grabowska, Kamila

2017-04-01

The order of the internodes, and their geometry and mechanical characteristics influence the capability of the Equisetum stem to vibrate, potentially stimulating spore liberation at the optimum stress setting along the stem. Equisetum hyemale L. plants represent a special example of cellular solid construction with mechanical stability achieved by a high second moment of area and relatively high resistance against local buckling. We proposed the hypothesis that the order of E. hyemale L. stem internodes, their geometry and mechanical characteristics influence the capability of the stem to vibrate, stimulating spore liberation at the minimum stress setting value along the stem. An analysis of apex vibration was done based on videos presenting the behavior of an Equisetum clump filmed in a wind tunnel and also as a result of excitation by bending the stem by 20°. We compared these data with the vibrations of stems of the same size but deprived of the three topmost internodes. Also, we created a finite element model (FEM), upon which we have based the 'natural' stem vibration as a copy of the real object, 'random' with reshuffled internodes and 'uniform', created as one tube with the characters averaged from all internodes. The natural internode arrangement influences the frequency and amplitude of the apex vibration, maintaining an equal stress distribution in the stem, which may influence the capability for efficient spore spreading.

Yeasts associated with an abandoned mining area in Pernek and their tolerance to different chemical elements.

PubMed

Vadkertiová, Renáta; Molnárová, Jana; Lux, Alexander; Vaculík, Marek; Lišková, Desana

2016-05-01

Four plants, Cirsium arvense (creeping thistle), Equisetum arvense (field horsetail), Oxalis acetosella (wood sorrel) and Phragmites australis (common reed), which grew in an abandoned Sb-mining area in Pernek (Malé Karpaty Mts., Slovakia), were investigated for the yeast species. Yeasts were isolated from both the leaves of the plants and the soil adjacent to the plants. In total, 65 yeast cultures, belonging to 11 ascomycetous and 5 basidiomycetous yeast species, were isolated. The species most frequently isolated from both the soil and leaf samples were Trichosporon porosum, Galactomyces candidus and Candida solani, whereas Aureobasidium pullulans, Candida tsuchiyae and Sporidiobolus metaroseus were isolated exclusively from the plant leaves. All the yeast species isolated were tested for their tolerance to two heavy metals (Cd, Zn) and three metalloids (As, Sb and Si). The yeasts isolated from both the leaves and soils exhibited a high tolerance level to both As and Sb, present in elevated concentrations at the locality. Among the yeast species tested, Cryptococcus musci, a close relative to Cryptococcus humicola, was the species most tolerant to all the chemical elements tested, with the exception of Si. It grew in the presence of 200 mmol/L Zn, 200 mmol/L Cd, 60 mmol/L As and 50 mmol/L Sb, and therefore, it can be considered as a multi-tolerant species. Some of the yeast species were tolerant to the individual chemical elements. The yeast-like species Trichosporon laibachii exhibited the highest tolerance to Si of all yeasts tested, and Cryptococcus flavescens and Lindnera saturnus showed the same tolerance as Cryptococcus musci to Zn and As, respectively. The majority of the yeasts showed a notably low tolerance to Cd (not exceeded 0.5 mmol/L), which was present in small amounts in the soil. However, Candida solani, isolated from the soil, exhibited a higher tolerance to Cd (20 mmol/L) than to As (2 mmol/L).

Registration of Elizabeth Thlaspi arvense L. (Pennycress) with improved nondormant traits

USDA-ARS?s Scientific Manuscript database

Elizabeth pennycress (Thlaspi arvense L.) germplasm (Reg. No. GP-36, PI 677360) was publicly released by the USDA-ARS in 2016 for the improvement of Thlaspi germplasm. Elizabeth was developed by four generations of mass selection based on the germination response of freshly harvested pennycress seed...

Registration of Katelyn Thlaspi arvense L. (Pennycress) with improved nondormant traits

USDA-ARS?s Scientific Manuscript database

Katelyn (Reg. No. GP-35, PI 673443) pennycress (Thlaspi arvense L.) was publicly released by the USDA-ARS in 2014 as part of a new crop improvement program. Katelyn was developed by two generations of mass selection based on the germination response of freshly harvested pennycress seeds. The origina...

Enrichment of erucic acid from pennycress (Thlaspi arvense L.) seed oil

USDA-ARS?s Scientific Manuscript database

Pennycress (Thlaspi arvense) is a winter annual that has a wide geographic distribution and a growth habitat that makes it suitable for an off-season rotation between corn and soybeans in much of the Midwestern United States. Pennycress seed contains 36% oil with 36.6% erucic acid content. There are...

Levels of some microelements and essential heavy metals in herbal teas in Serbia.

PubMed

Mihaljev, Zeljko; Zivkov-Balos, Milica; Cupić, Zeljko; Jaksić, Sandra

2014-01-01

Levels of Fe, Mn, Cu, Zn, Mo, Co, Ni, Se, Sn and Al were determined in 14 medicinal plants from Serbia, which are widely used in phytopharmacy as herbal teas. The following plants were investigated: yarrow (Achillea millefolium L.), basil (Ocimum hasilicum L.), St. John's wort (Hypericum perforatum L.), peppermint (Mentha x piperita L.), field horsetail (Equisetum arvense L.), stinging nettle (Urtica dioica L.), thyme (Thymus serpyllum L.), maize silk (Zea mays L. - Maydis stigma), hibiscus (Hibiscus sabdariffa L.), marshmallow (Althaea officinalis L.), chamomile (Matricaria chamomilla L.), rosehip/dog rose (Rosa canina L.), winter savory (Satureja montana L.) and spearmint (Mentha spicata L.). A total of 16 samples of different parts of medicinal plants (root, leaf, flower, herba) were examined, whereby 13 samples were delivered in original package and three samples were loose leaf herbs. Samples were prepared using the microwave digestion technique, and measurements were performed applying the atomic absorption spectrometry and mass spectrometry with inductively coupled plasma. Contents of microelements in the examined samples were in the range: Mn (23.86 - 453.71 mg/kg); Fe (61.87 - 673.0 mg/kg); Cu (6.68 - 24.46 mg/kg); Zn (16.11 - 113.81 mg/kg); Mo (0.576 - 4.265 mg/kg); Co (0.039 - 0.532 mg/kg); Se (0.036 - 0.146 mg/kg); Ni (0.738 - 6.034 mg/kg); Al (154.0 - 3015.0 mg/kg) and Sn (2.68 - 10.22 mg/kg). According to determined amounts of microelements, the investigated samples of herbal teas are considered safe for human consumption.

Extracts of Equisetum giganteum L and Copaifera reticulate Ducke show strong antiviral activity against the sexually transmitted pathogen herpes simplex virus type 2.

PubMed

Churqui, Marianela Patzi; Lind, Liza; Thörn, Karolina; Svensson, Alexandra; Savolainen, Otto; Aranda, Katty Terrazas; Eriksson, Kristina

2018-01-10

Equisetum giganteum L and Copaifera reticulate Ducke have been traditionally used by women of the Tacana tribe in the Bolivian Amazonas for genital hygiene and for treatment of genital infection/inflammation. To assess the ability of extracts from Equisetum giganteum L and Copaifera reticulate Ducke to block genital viral infection by herpes simplex virus type 2. Equisetum giganteum L and Copaifera reticulate Ducke were collected from the Amazon region of La Paz, Bolivia. Extracts were prepared and screened for anti-viral activity against herpes simplex virus type 2 (HSV-2) using both in vitro and in in vivo models of infection. Equisetum giganteum L and Copaifera reticulate Ducke efficiently blocked HSV-2 infection of cell cultures without major cell cytotoxic effects. Extracts of Equisetum giganteum L and Copaifera reticulate Ducke could prevent HSV-2 disease development when administered together with virus in a mouse model of genital HSV-2 infection. In vitro analyses revealed that both plant extracts exerted their anti-HSV-2 effects by interfering with viral cell attachment and entry, but could not block viral replication post entry. These studies show that extracts of Equisetum giganteum L and Copaifera reticulate Ducke have potent antiviral activities against HSV-2 comparable to those two previously identified plants, Croton lechleri Müll. Arg. and Uncaria tomentosa (Willd. ex Schult.) DC. These studies confirm that plants used by the Tacana tribe could be explored further for the development of novel topical antiviral microbicides. Copyright © 2017. Published by Elsevier B.V.

Extraction, composition and functional properties of pennycress (Thlaspi arvense L.) press cake protein

USDA-ARS?s Scientific Manuscript database

This study compared two methods for extracting the protein in pennycress (Thlaspi arvense L.) press cake and determined the composition and functional properties of the protein products. Proteins in pennycress press cake were extracted by using the conventional alkali solubilization-acid precipitati...

Sexuality and Genetic Identity in the Agaricus Section Arvenses

PubMed Central

Calvo-Bado, Leo; Noble, Ralph; Challen, Mike; Dobrovin-Pennington, Andreja; Elliott, Tim

2000-01-01

Twelve wild collections and one commercial strain were used to characterize breeding systems and to develop molecular identities in the Arvenses section of the genus Agaricus, which includes the “horse mushroom” A. arvensis. Two morphotypes were identified based on macro- and micromorphological features. However, not all collections could be delimited by conventional taxonomic characters. Sequencing of the small subunit intergenic spacer (ITS) region (368 to 370 bp) of the rRNA genes clearly resolved the 13 collections into two clusters consistent with the identified morphotypes. Single-spore progenies and mating type testers were established and used to test intra- and interstock compatibility. The two compatibility groups identified were consistent with ITS clusters. Compatibility group I stocks readily interbred within the constraints of a unifactorial heterothallic system with a multiallelic mating type factor. Compatibility group II had a more restricted breeding pattern, and interactions were difficult to predict on the basis of mating type. Morphological data, ITS sequences, and the ability to interbreed suggest that these collections are part of a complex of interrelated species. Single-spore, homokaryotic isolates from both compatibility groups were able to fruit in compost culture, and two of the collections may represent natural homokaryotic fruiting. We conclude that species from the section Arvenses have versatile unifactorial heterothallic life cycles that permit both interbreeding and homokaryotic fruiting. PMID:10653743

Successful establishment of epiphytotics of Puccinia punctiformis for biological control of Cirsium arvense

USDA-ARS?s Scientific Manuscript database

Canada thistle (Cirsium arvense, CT) is one of the worst weeds in temperate areas of the world. The rust fungus Puccinia punctiformis was first proposed as a biological control agent for CT in 1893. The rust causes systemic disease, is specific to CT, and is in all countries where CT is found. Despi...

Preparation, composition and functional properties of pennycress (Thlaspi arvense L.) seed protein isolates

USDA-ARS?s Scientific Manuscript database

This study evaluated two methods, saline extraction (SE) and conventional acid precipitation (AP), to recover proteins from pennycress (Thlaspi arvense L.) seed meal. SE was done using 0.1 M NaCl at 50ºC while AP involved alkaline extraction (pH 10) first followed by protein precipitation at pH 4. C...

Seed germination of cirsium arvense and Lepidium latifolium: Implications for management of montane wetlands

USGS Publications Warehouse

Laubhan, M.K.; Shaffer, T.L.

2006-01-01

Cirsium arvense and Lepidium latifolium are species that can aggressively invade wetland margins and potentially reduce biodiversity and alter ecosystem function. Although expansion of these species primarily occurs via rhizomatous growth, seeds are thought to be important in initial establishment. We conducted this study to investigate differences in seed germination of C. arvense and L. latifolium in montane wetlands of Colorado and Wyoming, USA. We used germination chambers to simulate environmental conditions (photoperiod, day/night temperature) during three periods of the growing season at each site and evaluated seed germination in relation to three soil moisture levels and two soil depths. A combination of shallow (<1 cm) seed burial and wet conditions resulted in the greatest germination probability of C. arvense (x = 63.0%), 95% CI = 41.2-80.5%), whereas deep (2-3 cm) seed burial and saturated moisture conditions resulted in almost no germination (x?? = 0.3%, 95% CI = 0.1-1.3%). The maximum germination probability of 44.0% (CI = 28.1-61.4%) for L. latifolium also occurred in the shallow burial and wet treatment; however, only effects of seed burial were significant (P < 0.05). The estimated mean germination probability of deeply buried seeds was <1.0% (CI = 0.3-1.4%) compared to 32% (CI = 19.7-47.9%) for shallowly buried seeds. Our results suggest that each species has the ability to germinate at similar rates throughout the growing season and across a large portion of the moisture gradient. This suggests that management actions, including water-level manipulations, at any time during the growing season may stimulate germination. Although burial of seed to depths of 2-3 cm reduced the germination potential of both species, the use of mechanical implements may be problematic in established stands because new plants of both species easily sprout from root buds. Further, disturbance resulting from such actions diminishes the density and vigor of other plants

Vibrational spectroscopy and electrophoresis as a "golden means" in monitoring of polysaccharides in medical plant and gels

NASA Astrophysics Data System (ADS)

Pielesz, A.

In recent years, some bioactive polysaccharides isolated from natural sources have attracted much attention in the field of biochemistry and pharmacology. Of them, polysaccharides or their glycoconjugates were shown to exhibit multiple biological activities including anticarcinogenic, anticoagulant, immunostimulating, antioxidant, etc. Pharmacotherapy using plant-derived substances can be currently regarded as a very promising future alternative to conventional therapy. The advanced biotechnologies available today enable chemical investigation of well-defined bioactive plant components as sources of novel drugs. The need for safer drugs without side effects has led to the use of natural ingredients with proven safety. Special interest is focused on plant polysaccharides. This article attempts to review the current structural and conformational characterization of some importantly bioactive monosaccharides isolated from following plant cell-wall: Symphytum officinale (comfrey), Thymus pulegioides (thyme), Trigonella foenum-graecum L. (fenugreek), Tussilago farfara L. (coltsfoot), Hyssopus officinalis (hyssop), Althaea officinalis L. (marshmallow) and Equisetum arvense L. (horsetail). The chemical structures of monosaccharides were analysed using FTIR and Raman spectroscopies as well as cellulose acetate membrane electrophoresis (CAE). The dried plant samples were gently hydrolysed with sulphuric acid. The presence of glucuronic acid, galacturonic acid, alginic acid, glucose, mannose and xylose in the hydrolysates of reference substances and non-defatted plant films was proved. The possibility of a taxonomic classification of plant cell walls based on infrared and Raman spectroscopies and the use of spectral fingerprinting for authentication and detection of adulteration of products rich in cell-wall materials are discussed. Individual bands were selected to monitor the sugar content in medical plant cell walls and to confirm the identity of the analysed plants.

Vibrational spectroscopy and electrophoresis as a "golden means" in monitoring of polysaccharides in medical plant and gels.

PubMed

Pielesz, A

2012-07-01

In recent years, some bioactive polysaccharides isolated from natural sources have attracted much attention in the field of biochemistry and pharmacology. Of them, polysaccharides or their glycoconjugates were shown to exhibit multiple biological activities including anticarcinogenic, anticoagulant, immunostimulating, antioxidant, etc. Pharmacotherapy using plant-derived substances can be currently regarded as a very promising future alternative to conventional therapy. The advanced biotechnologies available today enable chemical investigation of well-defined bioactive plant components as sources of novel drugs. The need for safer drugs without side effects has led to the use of natural ingredients with proven safety. Special interest is focused on plant polysaccharides. This article attempts to review the current structural and conformational characterization of some importantly bioactive monosaccharides isolated from following plant cell-wall: Symphytum officinale (comfrey), Thymus pulegioides (thyme), Trigonella foenum-graecum L. (fenugreek), Tussilago farfara L. (coltsfoot), Hyssopus officinalis (hyssop), Althaea officinalis L. (marshmallow) and Equisetum arvense L. (horsetail). The chemical structures of monosaccharides were analysed using FTIR and Raman spectroscopies as well as cellulose acetate membrane electrophoresis (CAE). The dried plant samples were gently hydrolysed with sulphuric acid. The presence of glucuronic acid, galacturonic acid, alginic acid, glucose, mannose and xylose in the hydrolysates of reference substances and non-defatted plant films was proved. The possibility of a taxonomic classification of plant cell walls based on infrared and Raman spectroscopies and the use of spectral fingerprinting for authentication and detection of adulteration of products rich in cell-wall materials are discussed. Individual bands were selected to monitor the sugar content in medical plant cell walls and to confirm the identity of the analysed plants

Evolution of the rpoB-psbZ region in fern plastid genomes: notable structural rearrangements and highly variable intergenic spacers

PubMed Central

2011-01-01

Background The rpoB-psbZ (BZ) region of some fern plastid genomes (plastomes) has been noted to go through considerable genomic changes. Unraveling its evolutionary dynamics across all fern lineages will lead to clarify the fundamental process shaping fern plastome structure and organization. Results A total of 24 fern BZ sequences were investigated with taxon sampling covering all the extant fern orders. We found that: (i) a tree fern Plagiogyria japonica contained a novel gene order that can be generated from either the ancestral Angiopteris type or the derived Adiantum type via a single inversion; (ii) the trnY-trnE intergenic spacer (IGS) of the filmy fern Vandenboschia radicans was expanded 3-fold due to the tandem 27-bp repeats which showed strong sequence similarity with the anticodon domain of trnY; (iii) the trnY-trnE IGSs of two horsetail ferns Equisetum ramosissimum and E. arvense underwent an unprecedented 5-kb long expansion, more than a quarter of which was consisted of a single type of direct repeats also relevant to the trnY anticodon domain; and (iv) ycf66 has independently lost at least four times in ferns. Conclusions Our results provided fresh insights into the evolutionary process of fern BZ regions. The intermediate BZ gene order was not detected, supporting that the Adiantum type was generated by two inversions occurring in pairs. The occurrence of Vandenboschia 27-bp repeats represents the first evidence of partial tRNA gene duplication in fern plastomes. Repeats potentially forming a stem-loop structure play major roles in the expansion of the trnY-trnE IGS. PMID:21486489

Evolution of the rpoB-psbZ region in fern plastid genomes: notable structural rearrangements and highly variable intergenic spacers.

PubMed

Gao, Lei; Zhou, Yuan; Wang, Zhi-Wei; Su, Ying-Juan; Wang, Ting

2011-04-13

The rpoB-psbZ (BZ) region of some fern plastid genomes (plastomes) has been noted to go through considerable genomic changes. Unraveling its evolutionary dynamics across all fern lineages will lead to clarify the fundamental process shaping fern plastome structure and organization. A total of 24 fern BZ sequences were investigated with taxon sampling covering all the extant fern orders. We found that: (i) a tree fern Plagiogyria japonica contained a novel gene order that can be generated from either the ancestral Angiopteris type or the derived Adiantum type via a single inversion; (ii) the trnY-trnE intergenic spacer (IGS) of the filmy fern Vandenboschia radicans was expanded 3-fold due to the tandem 27-bp repeats which showed strong sequence similarity with the anticodon domain of trnY; (iii) the trnY-trnE IGSs of two horsetail ferns Equisetum ramosissimum and E. arvense underwent an unprecedented 5-kb long expansion, more than a quarter of which was consisted of a single type of direct repeats also relevant to the trnY anticodon domain; and (iv) ycf66 has independently lost at least four times in ferns. Our results provided fresh insights into the evolutionary process of fern BZ regions. The intermediate BZ gene order was not detected, supporting that the Adiantum type was generated by two inversions occurring in pairs. The occurrence of Vandenboschia 27-bp repeats represents the first evidence of partial tRNA gene duplication in fern plastomes. Repeats potentially forming a stem-loop structure play major roles in the expansion of the trnY-trnE IGS.

Pennycress (Thlaspi arvense): A new oilseed for biofuel production in Europe and the U.S.

USDA-ARS?s Scientific Manuscript database

Recently the interest toward potential new oilseeds is rapidly increasing; in particular, non-food crops that do not compete with food production are highly required by farmers and biobased industries. In the last decade, a “potential weed,” field pennycress (Thlaspi arvense, hereafter pennycress) h...

Early planting dates maximize winter annual field pennycress (Thlaspi arvense L.) yield and oil content

USDA-ARS?s Scientific Manuscript database

Pennycress (Thlaspi arvense L.), a common weed species in North America, has received attention in recent years as a potential oilseed feedstock for biofuel production. However, little is known about best practices for its production as a managed crop. The objective of this study was to determine op...

An antifungal protein from the pea Pisum sativum var. arvense Poir.

PubMed

Wang, H X; Ng, T B

2006-07-01

An antifungal protein with a molecular mass of 11 kDa and a lysine-rich N-terminal sequence was isolated from the seeds of the pea Pisum sativum var. arvense Poir. The antifungal protein was unadsorbed on DEAE-cellulose but adsorbed on Affi-gel blue gel and CM-cellulose. It exerted antifungal activity against Physalospora piricola with an IC50 of 0.62 microM, and also antifungal activity against Fusarium oxysporum and Mycosphaerella arachidicola. It inhibited human immunodeficiency virus type 1 reverse transcriptase with an IC50 of 4.7 microM.

Volatile components of horsetail (Hippuris vulgaris L.) growing in central Italy.

PubMed

Cianfaglione, Kevin; Papa, Fabrizio; Maggi, Filippo

2017-10-01

Hippuris vulgaris, also known as horsetail or marestail, is a freshwater macrophyte occurring in lakes, rivers, ponds and marshes. According to 'The IUCN Red List of Threatened Species', H. vulgaris is at a high risk of extinction in Italy in the medium-term future. In the present study, we analysed for the first time the volatile composition of H. vulgaris growing in central Italy. For the purpose, the essential oil was obtained by hydrodistillation and analysed by GC-MS. The chemical composition was dominated by aliphatic compounds such as fatty acids (26.0%), ketones (18.7%) and alkanes (11.4%), whereas terpenoids were poorer and mostly represented by diterpenes (7.4%). n-Hexadecanoic acid (25.5%), hexahydrofarnesyl acetone (17.5%) and trans-phytol (7.4%) were the major volatile constituents. These compounds are here proposed as chemotaxonomic markers of the species.

Germination parameterization and development of an after-ripening thermal-time model for primary dormancy release of Lithospermum arvense seeds.

PubMed

Chantre, Guillermo R; Batlla, Diego; Sabbatini, Mario R; Orioli, Gustavo

2009-06-01

Models based on thermal-time approaches have been a useful tool for characterizing and predicting seed germination and dormancy release in relation to time and temperature. The aims of the present work were to evaluate the relative accuracy of different thermal-time approaches for the description of germination in Lithospermum arvense and to develop an after-ripening thermal-time model for predicting seed dormancy release. Seeds were dry-stored at constant temperatures of 5, 15 or 24 degrees C for up to 210 d. After different storage periods, batches of 50 seeds were incubated at eight constant temperature regimes of 5, 8, 10, 13, 15, 17, 20 or 25 degrees C. Experimentally obtained cumulative-germination curves were analysed using a non-linear regression procedure to obtain optimal population thermal parameters for L. arvense. Changes in these parameters were described as a function of after-ripening thermal-time and storage temperature. The most accurate approach for simulating the thermal-germination response of L. arvense was achieved by assuming a normal distribution of both base and maximum germination temperatures. The results contradict the widely accepted assumption of a single T(b) value for the entire seed population. The after-ripening process was characterized by a progressive increase in the mean maximum germination temperature and a reduction in the thermal-time requirements for germination at sub-optimal temperatures. The after-ripening thermal-time model developed here gave an acceptable description of the observed field emergence patterns, thus indicating its usefulness as a predictive tool to enhance weed management tactics.

Some dynamics of spread and infection by aeciospores of Puccinia punctiformis, a biological control pathogen of Cirsium arvense

USDA-ARS?s Scientific Manuscript database

In this study, effective spread of aeciospores from an area source in a field was fit to an exponential decline model with a predicted maximum distance of spread of 30 m from the area source to observed uredinia on one leaf of one C. arvense shoot. However, the greatest number of shoots bearing leav...

Germination parameterization and development of an after-ripening thermal-time model for primary dormancy release of Lithospermum arvense seeds

PubMed Central

Chantre, Guillermo R.; Batlla, Diego; Sabbatini, Mario R.; Orioli, Gustavo

2009-01-01

Background and Aims Models based on thermal-time approaches have been a useful tool for characterizing and predicting seed germination and dormancy release in relation to time and temperature. The aims of the present work were to evaluate the relative accuracy of different thermal-time approaches for the description of germination in Lithospermum arvense and to develop an after-ripening thermal-time model for predicting seed dormancy release. Methods Seeds were dry-stored at constant temperatures of 5, 15 or 24 °C for up to 210 d. After different storage periods, batches of 50 seeds were incubated at eight constant temperature regimes of 5, 8, 10, 13, 15, 17, 20 or 25 °C. Experimentally obtained cumulative-germination curves were analysed using a non-linear regression procedure to obtain optimal population thermal parameters for L. arvense. Changes in these parameters were described as a function of after-ripening thermal-time and storage temperature. Key Results The most accurate approach for simulating the thermal-germination response of L. arvense was achieved by assuming a normal distribution of both base and maximum germination temperatures. The results contradict the widely accepted assumption of a single Tb value for the entire seed population. The after-ripening process was characterized by a progressive increase in the mean maximum germination temperature and a reduction in the thermal-time requirements for germination at sub-optimal temperatures. Conclusions The after-ripening thermal-time model developed here gave an acceptable description of the observed field emergence patterns, thus indicating its usefulness as a predictive tool to enhance weed management tactics. PMID:19332426

Changes in Canada thistle (Cirsium arvense) shoot density following inoculation with Puccinia punctiformis and induction of symptomatic and asymptomatic systemic disease

USDA-ARS?s Scientific Manuscript database

Canada thistle (Cirsium arvense, CT) is one of the worst weeds in temperate areas of the world. The rust fungus Puccinia punctiformis was first proposed as a biological control agent for CT in 1893. The rust causes systemic disease which ultimately kills CT plants. In 2013, it was demonstrated in fo...

Alkaloid-Containing Plants Poisonous to Cattle and Horses in Europe.

PubMed

Cortinovis, Cristina; Caloni, Francesca

2015-12-08

Alkaloids, nitrogen-containing secondary plant metabolites, are of major interest to veterinary toxicology because of their occurrence in plant species commonly involved in animal poisoning. Based on epidemiological data, the poisoning of cattle and horses by alkaloid-containing plants is a relatively common occurrence in Europe. Poisoning may occur when the plants contaminate hay or silage or when forage alternatives are unavailable. Cattle and horses are particularly at risk of poisoning by Colchicum autumnale (meadow saffron), Conium maculatum (poison hemlock), Datura stramonium (jimson weed), Equisetum palustre (marsh horsetail), Senecio spp. (ragwort and groundsel) and Taxus baccata (European yew). This review of poisonous alkaloid-containing plants describes the distribution of these plants, conditions under which poisoning occurs, active toxic principles involved and subsequent clinical signs observed.

Alkaloid-Containing Plants Poisonous to Cattle and Horses in Europe

PubMed Central

Cortinovis, Cristina; Caloni, Francesca

2015-01-01

Alkaloids, nitrogen-containing secondary plant metabolites, are of major interest to veterinary toxicology because of their occurrence in plant species commonly involved in animal poisoning. Based on epidemiological data, the poisoning of cattle and horses by alkaloid-containing plants is a relatively common occurrence in Europe. Poisoning may occur when the plants contaminate hay or silage or when forage alternatives are unavailable. Cattle and horses are particularly at risk of poisoning by Colchicum autumnale (meadow saffron), Conium maculatum (poison hemlock), Datura stramonium (jimson weed), Equisetum palustre (marsh horsetail), Senecio spp. (ragwort and groundsel) and Taxus baccata (European yew). This review of poisonous alkaloid-containing plants describes the distribution of these plants, conditions under which poisoning occurs, active toxic principles involved and subsequent clinical signs observed. PMID:26670251

Preparation and fuel properties of field pennycress (Thlaspi arvense) seed oil ethyl esters and blends with ultra-low sulfur diesel fuel

USDA-ARS?s Scientific Manuscript database

Field pennycress (Thlaspi arvense L.) is a widely distributed winter annual with high seed oil content (36%) and is suitable as an off-season rotational crop in the Midwestern U.S. Erucic [(13Z)-docosenoic] acid (36.2%) is the most abundant constituent in the oil, with unsaturated and very long chai...

Vegetation-induced spatial variability of soil redox properties in wetlands

NASA Astrophysics Data System (ADS)

Szalai, Zoltán; Jakab, Gergely; Kiss, Klaudia; Ringer, Marianna; Balázs, Réka; Zacháry, Dóra; Horváth Szabó, Kata; Perényi, Katalin

2016-04-01

Vegetation induced land patches may result spatial pattern of on soil Eh and pH. These spatial pattern are mainly emerged by differences of aeration and exudation of assimilates. Present paper focuses on vertical extent and temporal dynamics of these patterns in wetlands. Two study sites were selected: 1. a plain wetland on calcareous sandy parent material (Ceglédbercel, Danube-Tisza Interfluve, Hungary); 2. headwater wetland with calcareous loamy parent material (Bátaapáti, Hungary). Two vegetation patches were studied in site 1: sedgy (dominated by Carex riparia) and reedy (dominated by Phragmites australis). Three patches were studied in site2: sedgy1 (dominated by C vulpina), sedgy 2 (C. riparia); nettle-horsetail (Urtica dioica and Equisetum arvense). Boundaries between patches were studied separately. Soil redox, pH and temperature studied by automated remote controlled instruments. Three digital sensors (Ponsell) were installed in each locations: 20cm and 40cm sensors represent the solum and 100 cm sensor monitors the subsoil). Groundwater wells were installed near to triplets for soil water sampling. Soil Eh, pH and temperature values were recorded in each 10 minutes. Soil water sampling for iron and DOC were carried out during saturated periods. Spatial pattern of soil Eh is clearly caused by vegetation. We measured significant differences between Eh values of the studied patches in the solum. We did not find this kinds horizontal differences in the subsoil. Boundaries of the patches usually had more reductive soil environment than the core areas. We have found temporal dynamics of the spatial redox pattern. Differences were not so well expressed during wintertime. These spatial patterns had influence on the DOC and iron content of porewater, as well. Highest temporal dynamics of soil redox properties and porewater iron could be found in the boundaries. These observations refer to importance patchiness of vegetation on soil chemical properties in

Cytotoxicity of Brazilian plant extracts against oral microorganisms of interest to dentistry.

PubMed

de Oliveira, Jonatas Rafael; de Castro, Vinicius Carlos; das Graças Figueiredo Vilela, Polyana; Camargo, Samira Esteves Afonso; Carvalho, Cláudio Antonio Talge; Jorge, Antonio Olavo Cardoso; de Oliveira, Luciane Dias

2013-08-15

With the emergence of strains resistant to conventional antibiotics, it is important to carry studies using alternative methods to control these microorganisms causing important infections, such as the use of products of plant origin that has demonstrated effective antimicrobial activity besides biocompatibility. Therefore, this study aimed to evaluate the antimicrobial activity of plant extracts of Equisetum arvense L., Glycyrrhiza glabra L., Punica granatum L. and Stryphnodendron barbatimam Mart. against Staphylococcus aureus, Staphylococcus epidermidis, Streptococcus mutans, Candida albicans, Candida tropicalis, and Candida glabrata, and to analyze the cytotoxicity of these extracts in cultured murine macrophages (RAW 264.7). Antimicrobial activity of plant extracts was evaluated by microdilution method based on Clinical and Laboratory Standards Institute (CLSI), M7-A6 and M27-A2 standards. The cytotoxicity of concentrations that eliminated the microorganisms was evaluated by MTT colorimetric method and by quantification of proinflammatory cytokines (IL-1β and TNF-α) using ELISA. In determining the minimum microbicidal concentration, E. arvense L., P. granatum L., and S. barbatimam Mart. extracts at a concentration of 50 mg/mL and G. glabra L. extract at a concentration of 100 mg/mL, were effective against all microorganisms tested. Regarding cell viability, values were 48% for E. arvense L., 76% for P. granatum L, 86% for S. barbatimam Mart. and 79% for G. glabra L. at the same concentrations. About cytokine production after stimulation with the most effective concentrations of the extracts, there was a significant increase of IL-1β in macrophage cultures treated with S. barbatimam Mart. (3.98 pg/mL) and P. granatum L. (7.72 pg/mL) compared to control (2.20 pg/mL) and a significant decrease of TNF-α was observed in cultures treated with G. glabra L. (4.92 pg/mL), S. barbatimam Mart. (0.85 pg/mL), E. arvense L. (0.83 pg/mL), and P. granatum L. (0.00 pg

Various extraction methods influence the adhesive properties of DDGS .... pennycress (Thlaspi arvense L.) and lesquerella (Lesquerella fendleri A. Gary (S. Watson) in the fabrication of lignocellulosic composites

USDA-ARS?s Scientific Manuscript database

Lignocellulosic composite (LC) panels were fabricated using an adhesive matrix prepared from three different agricultural by-products: dried distillers grains with solubles (DDGS), pennycress (Thlaspi arvense L.) press cake (PPC) or lesquerella (Lesquerella fendleri A. Gary (S. Watson) press cake (L...

Reaching multi-nanosecond timescales in combined QM/MM molecular dynamics simulations through parallel horsetail sampling.

PubMed

Martins-Costa, Marilia T C; Ruiz-López, Manuel F

2017-04-15

We report an enhanced sampling technique that allows to reach the multi-nanosecond timescale in quantum mechanics/molecular mechanics molecular dynamics simulations. The proposed technique, called horsetail sampling, is a specific type of multiple molecular dynamics approach exhibiting high parallel efficiency. It couples a main simulation with a large number of shorter trajectories launched on independent processors at periodic time intervals. The technique is applied to study hydrogen peroxide at the water liquid-vapor interface, a system of considerable atmospheric relevance. A total simulation time of a little more than 6 ns has been attained for a total CPU time of 5.1 years representing only about 20 days of wall-clock time. The discussion of the results highlights the strong influence of the solvation effects at the interface on the structure and the electronic properties of the solute. © 2017 Wiley Periodicals, Inc. © 2017 Wiley Periodicals, Inc.

Experimental study of terrestrial plant litter interaction with aqueous solutions

NASA Astrophysics Data System (ADS)

Fraysse, F.; Pokrovsky, O. S.; Meunier, J.-D.

2010-01-01

Quantification of silicon and calcium recycling by plants is hampered by the lack of physico-chemical data on reactivity of plant litter in soil environments. We applied a laboratory experimental approach for determining the silica and calcium release rates from litter of typical temperate and boreal plants: pine ( Pinus laricio), birch ( Betula pubescens), larch ( Larix gmelinii), elm ( Ulmus laevis Pall.), tree fern ( Dicksonia squarrosa), and horsetail (Equisetum arvense) in 0.01 M NaCl solutions, pH of 2-10 and temperature equals to 5, 25 and 40 °C. Open system, mixed-flow reactors equipped with dialysis compartment and batch reactors were used. Comparative measurements were performed on intact larch needles and samples grounded during different time, sterilized or not and with addition or not of sodium azide in order to account for the effect of surface to mass ratio and possible microbiological activity on the litter dissolution rates. Litter degradation results suggest that the silica release rate is independent on dissolved organic carbon release (cell breakdown) which implies the presence of phytoliths in a pure "inorganic" pool not complexed with organic matter. Calcium and DOC are released at the very first stage of litter dissolution while Si concentration increases gradually suggesting the presence of Ca and Si in two different pools. The dry-weight normalized dissolution rate at circum-neutral pH range (approx. 1-10 μmol/g DW/day) is 2 orders of magnitude higher than the rates of Si release from common soil minerals (kaolinite, smectite, illite). Minimal Ca release rates evaluated from batch and mixed-flow reactors are comparable with those of most reactive soil minerals such as calcite and apatite, and several orders of magnitude higher than the dissolution rates of major rock-forming silicates (feldspars, pyroxenes). The activation energy for Si liberation from plant litter is approx. 50 kJ/mol which is comparable with that of surface

Expression of the R2R3-MYB Transcription Factor TaMYB14 from Trifolium arvense Activates Proanthocyanidin Biosynthesis in the Legumes Trifolium repens and Medicago sativa1[W][OA

PubMed Central

Hancock, Kerry R.; Collette, Vern; Fraser, Karl; Greig, Margaret; Xue, Hong; Richardson, Kim; Jones, Chris; Rasmussen, Susanne

2012-01-01

Proanthocyanidins (PAs) are oligomeric flavonoids and one group of end products of the phenylpropanoid pathway. PAs have been reported to be beneficial for human and animal health and are particularly important in pastoral agricultural systems for improved animal production and reduced greenhouse gas emissions. However, the main forage legumes grown in these systems, such as Trifolium repens and Medicago sativa, do not contain any substantial amounts of PAs in leaves. We have identified from the foliar PA-accumulating legume Trifolium arvense an R2R3-MYB transcription factor, TaMYB14, and provide evidence that this transcription factor is involved in the regulation of PA biosynthesis in legumes. TaMYB14 expression is necessary and sufficient to up-regulate late steps of the phenylpropanoid pathway and to induce PA biosynthesis. RNA interference silencing of TaMYB14 resulted in almost complete cessation of PA biosynthesis in T. arvense, whereas Nicotiana tabacum, M. sativa, and T. repens plants constitutively expressing TaMYB14 synthesized and accumulated PAs in leaves up to 1.8% dry matter. Targeted liquid chromatography-multistage tandem mass spectrometry analysis identified foliar PAs up to degree of polymerization 6 in leaf extracts. Hence, genetically modified M. sativa and T. repens plants expressing TaMYB14 provide a viable option for improving animal health and mitigating the negative environmental impacts of pastoral animal production systems. PMID:22566493

Phytomedicine in Joint Disorders

PubMed Central

Dragos, Dorin; Gilca, Marilena; Gaman, Laura; Vlad, Adelina; Iosif, Liviu; Stoian, Irina; Lupescu, Olivera

2017-01-01

Chronic joint inflammatory disorders such as osteoarthritis and rheumatoid arthritis have in common an upsurge of inflammation, and oxidative stress, resulting in progressive histological alterations and disabling symptoms. Currently used conventional medication (ranging from pain-killers to biological agents) is potent, but frequently associated with serious, even life-threatening side effects. Used for millennia in traditional herbalism, medicinal plants are a promising alternative, with lower rate of adverse events and efficiency frequently comparable with that of conventional drugs. Nevertheless, their mechanism of action is in many cases elusive and/or uncertain. Even though many of them have been proven effective in studies done in vitro or on animal models, there is a scarcity of human clinical evidence. The purpose of this review is to summarize the available scientific information on the following joint-friendly medicinal plants, which have been tested in human studies: Arnica montana, Boswellia spp., Curcuma spp., Equisetum arvense, Harpagophytum procumbens, Salix spp., Sesamum indicum, Symphytum officinalis, Zingiber officinalis, Panax notoginseng, and Whitania somnifera. PMID:28275210

Evaluation of Restoration Methods to Minimize Canada Thistle (Cirsium arvense) Infestation

USGS Publications Warehouse

Larson, Diane L.

2009-01-01

The National Wildlife Refuge System has an active habitat restoration program and annually seeds thousands of hectares with native plant species. The noxious weed, Canada thistle (Cirsium arvense), plagues these restorations. This study evaluates planting methodology and seed mixes with the goal of recommending optimal methods to reduce infestation of noxious weeds, especially Canada thistle, in new restorations. Three planting methods (dormant season broadcast, growing season [summer] broadcast, and growing season [summer] drill) were fully crossed with three levels of seed diversity (10, 20, and 34 species [plus a fourth level, 58 species, on the three sites in Iowa]) in a completely randomized design replicated on nine sites in Minnesota and Iowa. The propagule bank of Canada thistle was evaluated at each site. Planting occurred in winter 2004 and spring-summer 2005. Here I report on results through summer 2007. None of the planting methods or seed mix diversities consistently resulted in reduced abundance of Canada thistle. Soil texture had the strongest influence; sites with greater proportions of clay had greater frequency and cover of Canada thistle than did sandy sites. At the Minnesota study sites, the dormant broadcast planting method combined with the highest seed diversity resulted in both the greatest cover of planted species as well as the greatest richness of planted species. At the Iowa sites, planted species richness was slightly greater in the summer drill plots, but cover of planted species was greatest in the dormant broadcast plots. Richness of planted species at the Iowa sites was maximized in the high diversity plots, with the extra-high diversity seed mix resulting in significantly lower species richness. Individual species responded to planting methods idiosyncratically, which suggests that particular species could be favored by tailoring planting methods to that species.

A study on pyrolysis of Canada thistle (Cirsium arvense) with titania based catalysts for bio-fuel production.

PubMed

Aysu, Tevfik

2016-11-01

The catalytic pyrolysis of Cirsium arvense was performed with titania supported catalysts under the operating conditions of 500°C, 40°C/min heating rate, 100mL/min N2 flow rate in a fixed bed reactor for biofuel production. The effect of catalysts on product yields was investigated. The amount of pyrolysis products (bio-char, bio-oil, gas) and the composition of the produced bio-oils were determined by proton nuclear magnetic resonance ((1)H NMR), Fourier transform infrared spectroscopy (FT-IR), gas chromatography/mass spectrometry (GC-MS) and elemental analysis (EA) techniques. Thistle bio-oils had lower O/C and H/C molar ratios compared to feedstock. The highest bio-char and bio-oil yields of 29.32wt% and 36.71wt% were obtained in the presence of Ce/TiO2 and Ni/TiO2 catalysts respectively. GC-MS identified 97 different compounds in the bio-oils obtained from thistle pyrolysis. (1)H NMR analysis showed that the bio-oils contained ∼55-77% aliphatic and ∼6-19% aromatic structural units. Copyright © 2016 Elsevier Ltd. All rights reserved.

Neutron scanning reveals unexpected complexity in the enamel thickness of an herbivorous Jurassic reptile.

PubMed

Jones, Marc E H; Lucas, Peter W; Tucker, Abigail S; Watson, Amy P; Sertich, Joseph J W; Foster, John R; Williams, Ruth; Garbe, Ulf; Bevitt, Joseph J; Salvemini, Floriana

2018-06-01

Eilenodontines are one of the oldest radiation of herbivorous lepidosaurs (snakes, lizards and tuatara) characterized by batteries of wide teeth with thick enamel that bear mammal-like wear facets. Unlike most reptiles, eilenodontines have limited tooth replacement, making dental longevity particularly important to them. We use both X-ray and neutron computed tomography to examine a fossil tooth from the eilenodontine Eilenodon (Late Jurassic, USA). Of the two approaches, neutron tomography was more successful and facilitated measurements of enamel thickness and distribution. We find the enamel thickness to be regionally variable, thin near the cusp tip (0.10 mm) but thicker around the base (0.15-0.30 mm) and notably greater than that of other rhynchocephalians such as the extant Sphenodon (0.08-0.14 mm). The thick enamel in Eilenodon would permit greater loading, extend tooth lifespan and facilitate the establishment of wear facets that have sharp edges for orally processing plant material such as horsetails ( Equisetum ). The shape of the enamel dentine junction indicates that tooth development in Eilenodon and Sphenodon involved similar folding of the epithelium but different ameloblast activity. © 2018 The Authors.

Evolution of green plants as deduced from 5S rRNA sequences.

PubMed

Hori, H; Lim, B L; Osawa, S

1985-02-01

We have constructed a phylogenic tree for green plants by comparing 5S rRNA sequences. The tree suggests that the emergence of most of the uni- and multicellular green algae such as Chlamydomonas, Spirogyra, Ulva, and Chlorella occurred in the early stage of green plant evolution. The branching point of Nitella is a little earlier than that of land plants and much later than that of the above green algae, supporting the view that Nitella-like green algae may be the direct precursor to land plants. The Bryophyta and the Pteridophyta separated from each other after emergence of the Spermatophyta. The result is consistent with the view that the Bryophyta evolved from ferns by degeneration. In the Pteridophyta, Psilotum (whisk fern) separated first, and a little later Lycopodium (club moss) separated from the ancestor common to Equisetum (horsetail) and Dryopteris (fern). This order is in accordance with the classical view. During the Spermatophyta evolution, the gymnosperms (Cycas, Ginkgo, and Metasequoia have been studied here) and the angiosperms (flowering plants) separated, and this was followed by the separation of Metasequoia and Cycas (cycad)/Ginkgo (maidenhair tree) on one branch and various flowering plants on the other.

Evolution of green plants as deduced from 5S rRNA sequences

PubMed Central

Hori, Hiroshi; Lim, Byung-Lak; Osawa, Syozo

1985-01-01

We have constructed a phylogenic tree for green plants by comparing 5S rRNA sequences. The tree suggests that the emergence of most of the uni- and multicellular green algae such as Chlamydomonas, Spirogyra, Ulva, and Chlorella occurred in the early stage of green plant evolution. The branching point of Nitella is a little earlier than that of land plants and much later than that of the above green algae, supporting the view that Nitella-like green algae may be the direct precursor to land plants. The Bryophyta and the Pteridophyta separated from each other after emergence of the Spermatophyta. The result is consistent with the view that the Bryophyta evolved from ferns by degeneration. In the Pteridophyta, Psilotum (whisk fern) separated first, and a little later Lycopodium (club moss) separated from the ancestor common to Equisetum (horsetail) and Dryopteris (fern). This order is in accordance with the classical view. During the Spermatophyta evolution, the gymnosperms (Cycas, Ginkgo, and Metasequoia have been studied here) and the angiosperms (flowering plants) separated, and this was followed by the separation of Metasequoia and Cycas (cycad)/Ginkgo (maidenhair tree) on one branch and various flowering plants on the other. PMID:16593540

Metabolite fingerprinting of pennycress (Thlaspi arvense L.) embryos to assess active pathways during oil synthesis

PubMed Central

Tsogtbaatar, Enkhtuul; Cocuron, Jean-Christophe; Sonera, Marcos Corchado; Alonso, Ana Paula

2015-01-01

Pennycress (Thlaspi arvense L.), a plant naturalized to North America, accumulates high levels of erucic acid in its seeds, which makes it a promising biodiesel and industrial crop. The main carbon sinks in pennycress embryos were found to be proteins, fatty acids, and cell wall, which respectively represented 38.5, 33.2, and 27.0% of the biomass at 21 days after pollination. Erucic acid reached a maximum of 36% of the total fatty acids. Together these results indicate that total oil and erucic acid contents could be increased to boost the economic competitiveness of this crop. Understanding the biochemical basis of oil synthesis in pennycress embryos is therefore timely and relevant to guide future breeding and/or metabolic engineering efforts. For this purpose, a combination of metabolomics approaches was conducted to assess the active biochemical pathways during oil synthesis. First, gas chromatography–mass spectrometry (GC-MS) profiling of intracellular metabolites highlighted three main families of compounds: organic acids, amino acids, and sugars/sugar alcohols. Secondly, these intermediates were quantified in developing pennycress embryos by liquid chromatography–tandem mass spectrometry (LC-MS/MS) in multiple reaction monitoring mode. Finally, partitional clustering analysis grouped the intracellular metabolites that shared a similar pattern of accumulation over time into eight clusters. This study underlined that: (i) sucrose might be stored rather than cleaved into hexoses; (ii) glucose and glutamine would be the main sources of carbon and nitrogen, respectively; and (iii) glycolysis, the oxidative pentose phosphate pathway, the tricarboxylic acid cycle, and the Calvin cycle were active in developing pennycress embryos. PMID:25711705

Antimicrobial activity of denture adhesive associated with Equisetum giganteum- and Punica granatum-enriched fractions against Candida albicans biofilms on acrylic resin surfaces.

PubMed

Almeida, Nara Ligia Martins; Saldanha, Luiz Leonardo; da Silva, Rafaela Alves; Pinke, Karen Henriette; da Costa, Eliane Ferraz; Porto, Vinicius Carvalho; Dokkedal, Anne Lígia; Lara, Vanessa Soares

2018-01-01

Candida biofilms adhere to the internal surface of removable dentures, which is an etiological factor in the pathogenesis of denture stomatitis (DS). Adhesive materials are used at the base of maxillary complete dentures to improve their retention and chewing qualities. This article reports the antimicrobial activity of the enriched fractions of Equisetum giganteum and Punica granatum incorporated into a denture adhesive against C. albicans biofilm. The biofilms were induced on the surface of heat-cured acrylic resin specimens that were previously treated with a mixture of adhesive/herb extracts. The antimicrobial activity was evaluated by CFU counts, XTT reduction, and SEM and CLSM analysis. Both herb extracts amplified the anti-biofilm action of the adhesive on the acrylic resin by up to 12 h. Therefore, when these extracts were combined with COREGA®, they played a collaborative and innovative role in biofilm control and can be considered alternatives for temporary use in the treatment and/or prevention of DS.

In vitro digestibility of fern and gymnosperm foliage: implications for sauropod feeding ecology and diet selection.

PubMed

Hummel, Jürgen; Gee, Carole T; Südekum, Karl-Heinz; Sander, P Martin; Nogge, Gunther; Clauss, Marcus

2008-05-07

Sauropod dinosaurs, the dominant herbivores throughout the Jurassic, challenge general rules of large vertebrate herbivory. With body weights surpassing those of any other megaherbivore, they relied almost exclusively on pre-angiosperm plants such as gymnosperms, ferns and fern allies as food sources, plant groups that are generally believed to be of very low nutritional quality. However, the nutritive value of these taxa is virtually unknown, despite their importance in the reconstruction of the ecology of Mesozoic herbivores. Using a feed evaluation test for extant herbivores, we show that the energy content of horsetails and of certain conifers and ferns is at a level comparable to extant browse. Based on our experimental results, plants such as Equisetum, Araucaria, Ginkgo and Angiopteris would have formed a major part of sauropod diets, while cycads, tree ferns and podocarp conifers would have been poor sources of energy. Energy-rich but slow-fermenting Araucaria, which was globally distributed in the Jurassic, was probably targeted by giant, high-browsing sauropods with their presumably very long ingesta retention times. Our data make possible a more realistic calculation of the daily food intake of an individual sauropod and improve our understanding of how large herbivorous dinosaurs could have flourished in pre-angiosperm ecosystems.

In vitro digestibility of fern and gymnosperm foliage: implications for sauropod feeding ecology and diet selection

PubMed Central

Hummel, Jürgen; Gee, Carole T; Südekum, Karl-Heinz; Sander, P. Martin; Nogge, Gunther; Clauss, Marcus

2008-01-01

Sauropod dinosaurs, the dominant herbivores throughout the Jurassic, challenge general rules of large vertebrate herbivory. With body weights surpassing those of any other megaherbivore, they relied almost exclusively on pre-angiosperm plants such as gymnosperms, ferns and fern allies as food sources, plant groups that are generally believed to be of very low nutritional quality. However, the nutritive value of these taxa is virtually unknown, despite their importance in the reconstruction of the ecology of Mesozoic herbivores. Using a feed evaluation test for extant herbivores, we show that the energy content of horsetails and of certain conifers and ferns is at a level comparable to extant browse. Based on our experimental results, plants such as Equisetum, Araucaria, Ginkgo and Angiopteris would have formed a major part of sauropod diets, while cycads, tree ferns and podocarp conifers would have been poor sources of energy. Energy-rich but slow-fermenting Araucaria, which was globally distributed in the Jurassic, was probably targeted by giant, high-browsing sauropods with their presumably very long ingesta retention times. Our data make possible a more realistic calculation of the daily food intake of an individual sauropod and improve our understanding of how large herbivorous dinosaurs could have flourished in pre-angiosperm ecosystems. PMID:18252667

Metabolite fingerprinting of pennycress ( Thlaspi arvense L.) embryos to assess active pathways during oil synthesis

DOE PAGES

Tsogtbaatar, Enkhtuul; Cocuron, Jean -Christophe; Sonera, Marcos Corchado; ...

2015-02-22

Pennycress ( Thlaspi arvense L.), a plant naturalized to North America, accumulates high levels of erucic acid in its seeds, which makes it a promising biodiesel and industrial crop. The main carbon sinks in pennycress embryos were found to be proteins, fatty acids, and cell wall, which respectively represented 38.5, 33.2, and 27.0% of the biomass at 21 days after pollination. Erucic acid reached a maximum of 36% of the total fatty acids. Together these results indicate that total oil and erucic acid contents could be increased to boost the economic competitiveness of this crop. Understanding the biochemical basis ofmore » oil synthesis in pennycress embryos is therefore timely and relevant to guide future breeding and/or metabolic engineering efforts. For this purpose, a combination of metabolomics approaches was conducted to assess the active biochemical pathways during oil synthesis. First, gas chromatography-mass spectrometry (GC-MS) profiling of intracellular metabolites highlighted three main families of compounds: organic acids, amino acids, and sugars/sugar alcohols. Secondly, these intermediates were quantified in developing pennycress embryos by liquid chromatography-tandem mass spectrometry (LC-MS/MS) in multiple reaction monitoring mode. Finally, partitional clustering analysis grouped the intracellular metabolites that shared a similar pattern of accumulation over time into eight clusters. In conclusion, this study underlined that: (i) sucrose might be stored rather than cleaved into hexoses; (ii) glucose and glutamine would be the main sources of carbon and nitrogen, respectively; and (iii) glycolysis, the oxidative pentose phosphate pathway, the tricarboxylic acid cycle, and the Calvin cycle were active in developing pennycress embryos.« less

Preparation of stable tetraethylenepentamine-modified ordered mesoporous silica sorbents by recycling natural Equisetum ramosissimum.

PubMed

Liu, Shou-Heng; Kuok, Chi-Hong

2018-01-01

It is well-known that global warming of the earth is caused by the progressive increase of CO 2 concentration in the environment due to the huge utilization of fossil fuels. As a result, the development of an efficient and economic method to capture CO 2 from large stationary sources, such as coal-fired power plants, cement and steel factories, and so on is urgent. In this study, ordered mesoporous silicas (E-SBA-15) have been prepared by using Equisetum ramosissimum plants as the silica sources and their subsequently incorporating with amino-containing compounds (tetraethylenepentamine, TEPA) and stabilizers (titanium isopropoxide, TIP). A variety of different spectroscopic and analytical techniques, such as nitrogen adsorption-desorption isotherms, low-angle X-ray diffraction (XRD), transmission electron microscopy (TEM), Fourier-transformed infrared (FTIR) spectroscopy, and thermogravimetric analysis (TGA) are used to characterize the physicochemical properties of various materials. CO 2 adsorption capacities of prepared sorbents at 75 °C are obtained by TGA at atmospheric pressure. Among all sorbents, TEPA impregnated E-SBA-15 sorbents possess the highest CO 2 sorption capacity (1.60 mmol CO 2 g -1 sorbent ) under ambient pressure using dry 15% CO 2 . However, TEPA/TIP incorporated E-SBA-15 sorbents exhibit enhanced durability during repeated sorption-desorption cycles compared to the above-mentioned sorbents. This significant enhancement in the stability of CO 2 sorption-desorption process is most likely due to the decreased decomposition/leaching of TEPA which is restricted via the steric effect of TIP. These synthesized sorbents from inexpensive resources (agricultural waste) exhibit good sorbent capacity and surpassing regenerability, revealing a promising CO 2 sorbent for the cost-effective applications in a cyclic adsorption process. Copyright © 2017 Elsevier Ltd. All rights reserved.

Crystal structure of Pisum arvense seed lectin (PAL) and characterization of its interaction with carbohydrates by molecular docking and dynamics.

PubMed

Pinto-Junior, Vanir Reis; Santiago, Mayara Queiroz; Nobre, Camila Bezerra; Osterne, Vinicius Jose Silva; Leal, Rodrigo Bainy; Cajazeiras, Joao Batista; Lossio, Claudia Figueiredo; Rocha, Bruno Anderson Matias; Martins, Maria Gleiciane Queiroz; Nobre, Clareane Avelino Simplicio; Silva, Mayara Torquato Lima; Nascimento, Kyria Santiago; Cavada, Benildo Sousa

2017-09-15

The Pisum arvense lectin (PAL), a legume protein belonging to the Vicieae tribe, is capable of specific recognition of mannose, glucose and its derivatives without altering its structure. In this work, the three-dimensional structure of PAL was determined by X-ray crystallography and studied in detail by a combination of molecular docking and molecular dynamics (MD). Crystals belonging to monoclinic space group P2 1 were grown by the vapor diffusion method at 293 K. The structure was solved at 2.16 Å and was similar to that of other Vicieae lectins. The structure presented R factor and R free of 17.04% and 22.08%, respectively, with all acceptable geometric parameters. Molecular docking was performed to analyze interactions of the lectin with monosaccharides, disaccharides and high-mannose N-glycans. PAL demonstrated different affinities on carbohydrates, depending on bond orientation and glycosidic linkage present in ligands. Furthermore, the lectin interacted with representative N-glycans in a manner consistent with the biological effects described for Vicieae lectins. Carbohydrate-recognition domain (CRD) in-depth analysis was performed by MD, describing the behavior of CRD residues in complex with ligand, stability, flexibility of the protein over time, CRD volume and topology. This is a first report of its kind for a lectin of the Vicieae tribe. Copyright © 2017 Elsevier Inc. All rights reserved.

Comparative study of rhizobacterial community structure of plant species in oil-contaminated soil.

PubMed

Lee, Eun-Hee; Cho, Kyong-Suk; Kim, Jaisoo

2010-09-01

In this study, the identity and distribution of plants and the structure of their associated rhizobacterial communities were examined in an oil-contaminated site. The number of plant species that formed a community or were scattered was 24. The species living in soil highly contaminated with total petroleum hydrocarbon (TPH) (9,000-4,5000 mg/g-soil) were Cynodon dactylon, Persicaria lapathifolia, and Calystegia soldanella (a halophytic species). Among the 24 plant species, the following have been known to be effective for oil removal: C. dactylon, Digitaria sanguinalis, and Cyperus orthostachyus. Denaturing gradient gel electrophoresis (DGGE) profile analysis showed that the following pairs of plant species had highly similar (above 70%) rhizobacterial community structures: Artemisia princeps and Hemistepta lyrata; C. dactylon and P. lapathifolia; Carex kobomugi and Cardamine flexuosa; and Equisetum arvense and D. sanguinalis. The major groups of rhizobacteria were Betaproteobacteria, Gamma-proteobacteria, Chloroflexi, Actinobacteria, and unknown. Based on DGGE analysis, P. lapathifolia, found for the first time in this study growing in the presence of high TPH, may be a good species for phytoremediation of oil-contaminated soils and in particular, C. soldanella may be useful for soils with high TPH and salt concentrations. Overall, this study suggests that the plant roots, regardless of plant species, may have a similar influence on the bacterial community structure in oil-contaminated soil.

Levels of Essential Elements in Different Medicinal Plants Determined by Using Inductively Coupled Plasma Mass Spectrometry

PubMed Central

2018-01-01

The objective of this study was to investigate the content of essential elements in medicinal plants in the Kingdom of Saudi Arabia (KSA). Five different medical plants (mahareeb (Cymbopogon schoenanthus), sheeh (Artemisia vulgaris), harjal (Cynanchum argel delile), nabipoot (Equisetum arvense), and cafmariam (Vitex agnus-castus)) were collected from Madina city in the KSA. Five elements Fe, Mn, Zn, Cu, and Se were determined by using inductively coupled plasma mass spectrometry (ICP-MS). Fe levels were the highest and Se levels were the lowest in all plants. The range levels of all elements in all plants were as follows: Fe 193.4–1757.9, Mn 23.6–143.7, Zn 15.4–32.7, Se 0.13–0.92, and Cu 11.3–21.8 µg/g. Intakes of essential elements from the medical plants in infusion were calculated: Fe 4.6–13.4, Mn 6.7–123.2, Zn 7.0–42.7, Se 0.14–1.5, and Cu 1.5–5.0 µg/dose. The calculated intakes of essential elements for all plants did not exceed the daily intake set by the World Health Organization (WHO) and European Food Safety Authority (EFSA). These medicinal plants may be useful sources of essential elements, which are vital for health. PMID:29744234

Divergence of the phytochrome gene family predates angiosperm evolution and suggests that Selaginella and Equisetum arose prior to Psilotum.

PubMed

Kolukisaoglu, H U; Marx, S; Wiegmann, C; Hanelt, S; Schneider-Poetsch, H A

1995-09-01

Thirty-two partial phytochrome sequences from algae, mosses, ferns, gymnosperms, and angiosperms (11 of them newly released ones from our laboratory) were analyzed by distance and character-state approaches (PHYLIP, TREECON, PAUP). In addition, 12 full-length sequences were analyzed. Despite low bootstrap values at individual internal nodes, the inferred trees (neighbor-joining, Fitch, maximum parsimony) generally showed similar branching orders consistent with other molecular data. Lower plants formed two distinct groups. One basal group consisted of Selaginella, Equisetum, and mosses; the other consisted of a monophyletic cluster of frond-bearing pteridophytes. Psilotum was a member of the latter group and hence perhaps was not, as sometimes suggested, a close relative of the first vascular plants. The results further suggest that phytochrome gene duplication giving rise to a- and b- and later to c-types may have taken place within seedfern genomes. Distance matrices dated the separation of mono- and dicotyledons back to about 260 million years before the present (Myr B.P.) and the separation of Metasequoia and Picea to a fossil record-compatible value of 230 Myr B.P. The Ephedra sequence clustered with the c- or a-type and Metasequoia and Picea sequences clustered with the b-type lineage. The "paleoherb" Nymphaea branched off from the c-type lineage prior to the divergence of mono- and dicotyledons on the a- and b-type branches. Sequences of Piper (another "paleoherb") created problems in that they branched off from different phytochrome lineages at nodes contradicting distance from the inferred trees' origin.

Comparison of the emergence of three Brassicaceae species of different origins grown in Spain and USA

USDA-ARS?s Scientific Manuscript database

Thlaspi arvense, Camelina sativa, C. microcarpa and Neslia paniculata are four Brassicaceae family species that are becoming rare in North-Eastern Spain. Conversely, both T. arvense and C. sativa are being investigated as oilseed crops in North America for industrial/biofuel purposes. C. microcarpa ...

Simultaneous determination of phenolic compounds in Equisetum palustre L. by ultra high performance liquid chromatography with tandem mass spectrometry combined with matrix solid-phase dispersion extraction.

PubMed

Wei, Zuofu; Pan, Youzhi; Li, Lu; Huang, Yuyang; Qi, Xiaolin; Luo, Meng; Zu, Yuangang; Fu, Yujie

2014-11-01

A method based on matrix solid-phase dispersion extraction followed by ultra high performance liquid chromatography with tandem mass spectrometry is presented for the extraction and determination of phenolic compounds in Equisetum palustre. This method combines the high efficiency of matrix solid-phase dispersion extraction and the rapidity, sensitivity, and accuracy of ultra high performance liquid chromatography with tandem mass spectrometry. The influential parameters of the matrix solid-phase dispersion extraction were investigated and optimized. The optimized conditions were as follows: silica gel was selected as dispersing sorbent, the ratio of silica gel to sample was selected to be 2:1 (400/200 mg), and 8 mL of 80% methanol was used as elution solvent. Furthermore, a fast and sensitive ultra high performance liquid chromatography with tandem mass spectrometry method was developed for the determination of nine phenolic compounds in E. palustre. This method was carried out within <6 min, and exhibited satisfactory linearity, precision, and recovery. Compared with ultrasound-assisted extraction, the proposed matrix solid-phase dispersion procedure possessed higher extraction efficiency, and was more convenient and time saving with reduced requirements on sample and solvent amounts. All these results suggest that the developed method represents an excellent alternative for the extraction and determination of active components in plant matrices. © 2014 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Seasonal persistence of marine-derived nutrients in south-central Alaskan salmon streams

USGS Publications Warehouse

Rinella, Daniel J.; Wipfi, Mark S.; Walker, Coowe M.; Stricker, Craig A.; Heintz, Ron A.

2013-01-01

Spawning salmon deliver annual pulses of marine-derived nutrients (MDN) to riverine ecosystems around the Pacific Rim, leading to increased growth and condition in aquatic and riparian biota. The influence of pulsed resources may last for extended periods of time when recipient food webs have effective storage mechanisms, yet few studies have tracked the seasonal persistence of MDN. With this as our goal, we sampled stream water chemistry and selected stream and riparian biota spring through fall at 18 stations (in six watersheds) that vary widely in spawner abundance and at nine stations (in three watersheds) where salmon runs were blocked by waterfalls. We then developed regression models that related dissolved nutrient concentrations and biochemical measures of MDN assimilation to localized spawner density across these 27 stations. Stream water ammonium-N and orthophosphate-P concentrations increased with spawner density during the summer salmon runs, but responses did not persist into the following fall. The effect of spawner density on δ15N in generalist macroinvertebrates and three independent MDN metrics (δ15N, δ34S, and ω3:ω6 fatty acids) in juvenile Dolly Varden (Salvelinus malma) was positive and similar during each season, indicating that MDN levels in biota increased with spawner abundance and were maintained for at least nine months after inputs. Delta 15N in a riparian plant, horsetail (Equisetum fluviatile), and scraper macroinvertebrates did not vary with spawner density in any season, suggesting a lack of MDN assimilation by these lower trophic levels. Our results demonstrate the ready assimilation of MDN by generalist consumers and the persistence of this pulsed subsidy in these organisms through the winter and into the next growing season.

Shore Vegetation of Lakes Oahe and Sakakawea, Mainstream Missouri River Reservoirs.

DTIC Science & Technology

1978-04-01

Atriplex rosea, Polygonum ramosissimum, Thlaspi arvense and Xanthium strumarium were also important on ungrazed plots and were reduced or absent on grazed... strumarium were all important on ungrazed plots, and absent on grazed plots at Minnconjou. Melilotus spp. and Thlaspi arvense were also important on ungrazed...the increase in coverage with fertilization of Chenopodium album, from 0% to 75%, and in :125 Xanthium strumarium , from 14%to 28%, Melilotus s de

[Therapeutically active dressings--biomaterials in a study of collagen glycation].

PubMed

Pielesz, Anna; Paluch, Jadwiga

2012-01-01

Active dressings (biomaterials, hydrogels) are cross-linked three-dimensional macromolecular networks. One of the most important properties of active dressings, is their ability for controlled uptake, release and retention of molecules. The formation of advanced glycation end products AGEs progressively increases with normal aging. However, AGE products are formed at accelerated rates in age and stress-related diseases (burns, in wound healing) and also in vitro. The aim will be also to develop a series of gels showing ability of controlled uptake, release and retention of molecules. The hydrogels can be used as biologically and therapeutically (antibacterial and anticancer) active biomaterials. The following materials and reagents were used in the examination: dried plants: Equisetum arvense L., Pulmonaria officinalis L., Agropyron repens. Non-defatted films were extracted from the dried plants. The suspension was stirred and extracted. Temperature was controlled using a water bath. The filtrate was vacuum condensed. The gelling precipitate was poured onto Petri plates and dried. The swelling ratio and the percent loading were calculated. The released amount of CaCl2 at different time intervals was determined by measuring the conductivity. The extent of glycation in collagen was measured. Novel types of swelling hydrogels have been prepared from dried plants and alginic acid. The active dressings showed swelling in aqueous medium, swelling characteristics were dependent on the chemical composition of hydrogel. The hydrogels were also loaded with CaCl2 and their potential for release was judged by measuring conductivity. The activity of hydrogels--active dressings on collagen incubated with glucose showed an decrease in glycation. So, hydrogels--active dressings, a known antiglycating agent which have therapeutic role in wound healing.

Dietary breadth of grizzly bears in the Greater Yellowstone Ecosystem

USGS Publications Warehouse

Gunther, Kerry A.; Shoemaker, Rebecca; Frey, Kevin L.; Haroldson, Mark A.; Cain, Steven L.; van Manen, Frank T.; Fortin, Jennifer K.

2014-01-01

Grizzly bears (Ursus arctos) in the Greater Yellowstone Ecosystem (GYE) are opportunistic omnivores that eat a great diversity of plant and animal species. Changes in climate may affect regional vegetation, hydrology, insects, and fire regimes, likely influencing the abundance, range, and elevational distribution of the plants and animals consumed by GYE grizzly bears. Determining the dietary breadth of grizzly bears is important to document future changes in food resources and how those changes may affect the nutritional ecology of grizzlies. However, no synthesis exists of all foods consumed by grizzly bears in the GYE. We conducted a review of available literature and compiled a list of species consumed by grizzly bears in the GYE. We documented >266 species within 200 genera from 4 kingdoms, including 175 plant, 37 invertebrate, 34 mammal, 7 fungi, 7 bird, 4 fish, 1 amphibian, and 1 algae species as well as 1 soil type consumed by grizzly bears. The average energy values of the ungulates (6.8 kcal/g), trout (Oncorhynchus spp., 6.1 kcal/g), and small mammals (4.5 kcal/g) eaten by grizzlies were higher than those of the plants (3.0 kcal/g) and invertebrates (2.7 kcal/g) they consumed. The most frequently detected diet items were graminoids, ants (Formicidae), whitebark pine seeds (Pinus albicaulis), clover (Trifolium spp.), and dandelion (Taraxacum spp.). The most consistently used foods on a temporal basis were graminoids, ants, whitebark pine seeds, clover, elk (Cervus elaphus), thistle (Cirsium spp.), and horsetail (Equisetum spp.). Historically, garbage was a significant diet item for grizzlies until refuse dumps were closed. Use of forbs increased after garbage was no longer readily available. The list of foods we compiled will help managers of grizzly bears and their habitat document future changes in grizzly bear food habits and how bears respond to changing food resources.

Plant-based medicines for anxiety disorders, Part 1: a review of preclinical studies.

PubMed

Sarris, Jerome; McIntyre, Erica; Camfield, David A

2013-03-01

Research in the area of herbal psychopharmacology has revealed a variety of promising medicines that may provide benefit in the treatment of general anxiety and specific anxiety disorders. However, a comprehensive review of plant-based anxiolytics has been absent to date. This article (part 1) reviews herbal medicines for which only preclinical investigations for anxiolytic activity have been performed. In part 2, we review herbal medicines for which there have been clinical investigations for anxiolytic activity. An open-ended, language-restricted (English) search of MEDLINE (PubMed), CINAHL, Scopus and the Cochrane Library databases was conducted (up to 28 October 2012) using specific search criteria to identify herbal medicines that have been investigated for anxiolytic activity. This search of the literature revealed 1,525 papers, from which 53 herbal medicines were included in the full review (having at least one study using the whole plant extract). Of these plants, 21 had human clinical trial evidence (reviewed in part 2), with another 32 having solely preclinical studies (reviewed here in part 1). Preclinical evidence of anxiolytic activity (without human clinical trials) was found for Albizia julibrissin, Sonchus oleraceus, Uncaria rhynchophylla, Stachys lavandulifolia, Cecropia glazioui, Magnolia spp., Eschscholzia californica, Erythrina spp., Annona spp., Rubus brasiliensis, Apocynum venetum, Nauclea latifolia, Equisetum arvense, Tilia spp., Securidaca longepedunculata, Achillea millefolium, Leea indica, Juncus effusus, Coriandrum sativum, Eurycoma longifolia, Turnera diffusa, Euphorbia hirta, Justicia spp., Crocus sativus, Aloysia polystachya, Albies pindrow, Casimiroa edulis, Davilla rugosa, Gastrodia elata, Sphaerathus indicus, Zizyphus jujuba and Panax ginseng. Common mechanisms of action for the majority of botanicals reviewed primarily involve GABA, either via direct receptor binding or ionic channel or cell membrane modulation; GABA transaminase

Microtubules in root hairs.

PubMed

Traas, J A; Braat, P; Emons, A M; Meekes, H; Derksen, J

1985-06-01

The microtubules of root hairs of Raphanus sativus, Lepidium sativum, Equisetum hyemale, Limnobium stoloniferum, Ceratopteris thalictroides, Allium sativum and Urtica dioica were investigated using immunofluorescence and electron microscopy. Arrays of cortical microtubules were observed in all hairs. The microtubules in the hairs show net axial orientations, but in Allium and Urtica helical microtubule patterns are also present. Numerical parameters of microtubules in Raphanus, Equisetum and Limnobium were determined from dry-cleave preparations. The results are discussed with respect to cell wall deposition and cell morphogenesis.

Developing Functional Parameters for a Science-Based Vehicle Cleaning Program to Reduce Transport of Non-Indigenous Invasive Plant Species

DTIC Science & Technology

2011-06-01

49 B3 Risk map for Bromus tectorum……………………………………………………………...50 B4 Risk map for Centaurea maculosa …………………………………………………………..51 B5 Risk map...tectorum Centaurea maculosa Cirsium arvense Linaria dalmatica Verbascum thapsus Intercept -5.89384 7.63606 2.10221 -447.2744 -36.33253 -2.07618... maculosa (spotted knapweed), Cirsium arvense (Canada thistle), Linaria dalmatica (Dalmation toadflax), and Verbascum thapsus (common mullein

Exotic plant infestation is associated with decreased modularity and increased numbers of connectors in mixed-grass prairie pollination networks

USGS Publications Warehouse

Larson, Diane L.; Rabie, Paul A.; Droege, Sam; Larson, Jennifer L.; Haar, Milton

2016-01-01

The majority of pollinating insects are generalists whose lifetimes overlap flowering periods of many potentially suitable plant species. Such generality is instrumental in allowing exotic plant species to invade pollination networks. The particulars of how existing networks change in response to an invasive plant over the course of its phenology are not well characterized, but may shed light on the probability of long-term effects on plant-pollinator interactions and the stability of network structure. Here we describe changes in network topology and modular structure of infested and non-infested networks during the flowering season of the generalist non-native flowering plant, Cirsium arvense in mixed-grass prairie at Badlands National Park, South Dakota, USA. Objectives were to compare network-level effects of infestation as they propagate over the season in infested and non-infested (with respect to C. arvense) networks. We characterized plant-pollinator networks on 5 non-infested and 7 infested 1-ha plots during 4 sample periods that collectively covered the length of C. arvense flowering period. Two other abundantly-flowering invasive plants were present during this time: Melilotus officinalis had highly variable floral abundance in both C. arvense-infested and non-infested plots andConvolvulus arvensis, which occurred almost exclusively in infested plots and peaked early in the season. Modularity, including roles of individual species, and network topology were assessed for each sample period as well as in pooled infested and non-infested networks. Differences in modularity and network metrics between infested and non-infested networks were limited to the third and fourth sample periods, during flower senescence of C. arvenseand the other invasive species; generality of pollinators rose concurrently, suggesting rewiring of the network and a lag effect of earlier floral abundance. Modularity was lower and number of connectors higher in infested

Teaching Basic Science Environmentally. Concept: Plants Reproduce Their Own Kind.

ERIC Educational Resources Information Center

Busch, Phyllis

1987-01-01

Offers suggestions for spring activities focusing on plant reproduction both indoors and outdoors. Suggests planting seeds to observe, measure, and record effects of temperature, moisture, fertilizer. Recommends outdoor study of the horsetail plant. (NEC)

Research notes : modeling a composite reinforced bridge.

DOT National Transportation Integrated Search

2001-06-01

In 1998, Oregon Department of Transportation (ODOT) used fiber reinforced polymer (FRP) composites to strengthen the historic Horsetail Falls Bridge. Because this was the first experience with FRP composites, research was conducted to verify that the...

Reduction of neonicotinoid insecticide residues in Prairie wetlands by common wetland plants.

PubMed

Main, Anson R; Fehr, Jessica; Liber, Karsten; Headley, John V; Peru, Kerry M; Morrissey, Christy A

2017-02-01

Neonicotinoid insecticides are frequently detected in wetlands during the early to mid-growing period of the Canadian Prairie cropping season. These detections also overlap with the growth of macrophytes that commonly surround agricultural wetlands which we hypothesized may reduce neonicotinoid transport and retention in wetlands. We sampled 20 agricultural wetlands and 11 macrophyte species in central Saskatchewan, Canada, over eight weeks to investigate whether macrophytes were capable of reducing movement of neonicotinoids from cultivated fields and/or reducing concentrations in surface water by accumulating insecticide residues into their tissues. Study wetlands were surrounded by clothianidin-treated canola and selected based on the presence (n=10) or absence (n=10) of a zonal plant community. Neonicotinoids were positively detected in 43% of wetland plants, and quantified in 8% of all plant tissues sampled. Three plant species showed high rates of detection: 78% Equisetum arvense (clothianidin, range:

Testing of full-size reinforced concrete beams strengthened with FRP composites : experimental results and design methods verification

DOT National Transportation Integrated Search

2000-06-01

In 1997, a load rating of an historic reinforced concrete bridge in Oregon, Horsetail Creek Bridge, indicated substandard shear and moment capacities of the beams. As a result, the Bridge was strengthened with fiber reinforced : polymer composites as...

Testing of full-size reinforced concrete beams strengthened with FRP composites : experimental results and design methods verification(appendices)

DOT National Transportation Integrated Search

2000-06-01

In 1997, a load rating of an historic reinforced concrete bridge in Oregon, Horsetail Creek Bridge, indicated substandard shear and moment capacities of the beams. As a result, the Bridge was strengthened with fiber reinforced polymer composites as a...

Optimum yields of dibenzylbutyrolactone-type lignans from Cynareae fruits, during their ripening, germination and enzymatic hydrolysis processes, determined by on-line chromatographic methods.

PubMed

Szokol-Borsodi, Lilla; Sólyomváry, Anna; Molnár-Perl, Ibolya; Boldizsár, Imre

2012-01-01

Dibenzylbutyrolactone-type lignans are the physiologically active constituents of the achene fruits of Cynareae. These lignans occur in glycoside/aglycone forms: in the highest quantity of the arctiin/arctigenin, matairesinoside/matairesinol and tracheloside/trachelogenin pairs found in the fruits of Arctium lappa L., Centaurea scabiosa L. and Cirsium arvense (L.) Scop. To optimise the extraction yield of the arctiin/arctigenin, matairesinoside/matairesinol and tracheloside/trachelogenin glycoside/aglycone pairs, from the fruits of Arctium lappa, Centaurea scabiosa and Cirsium arvense, under the ripening, germination and enzymatic hydrolysis processes of the fruits. Identification and quantification of lignans were performed with on-line gas chromatography-mass spectrometry (GC-MS) and with high performance liquid chromatography (HPLC), both with UV and mass selective detections (HPLC-UV/MS). As novelties to the field it was confirmed that: (i) the unripe fruits provide a high amount of lignans, similar to the ripe fruit; (ii) the fruits of Arctium lappa and Cirsium arvense do have glycosidase activity to hydrolyse their lignan glycosides into free lignans; (iii) the glycosidase of Centaurea scabiosa fruit becomes activated under its germination process only; and (iv) the overwhelming part of the fruits lignan contents (80-94%) in all three species are accumulated in the embryo. The best sources of (i) lignan aglycones are the enzyme-hydrolysed embryos, separating spontaneously during the germination process, and (ii) lignan glycosides are the unripe fruits. Copyright © 2012 John Wiley & Sons, Ltd.

Towards resolving the complete fern tree of life.

PubMed

Lehtonen, Samuli

2011-01-01

In the past two decades, molecular systematic studies have revolutionized our understanding of the evolutionary history of ferns. The availability of large molecular data sets together with efficient computer algorithms, now enables us to reconstruct evolutionary histories with previously unseen completeness. Here, the most comprehensive fern phylogeny to date, representing over one-fifth of the extant global fern diversity, is inferred based on four plastid genes. Parsimony and maximum-likelihood analyses provided a mostly congruent results and in general supported the prevailing view on the higher-level fern systematics. At a deep phylogenetic level, the position of horsetails depended on the optimality criteria chosen, with horsetails positioned as the sister group either of Marattiopsida-Polypodiopsida clade or of the Polypodiopsida. The analyses demonstrate the power of using a 'supermatrix' approach to resolve large-scale phylogenies and reveal questionable taxonomies. These results provide a valuable background for future research on fern systematics, ecology, biogeography and other evolutionary studies.

Classification of specialty seed meals from NIR reflectance spectra

USDA-ARS?s Scientific Manuscript database

Near infrared reflectance spectroscopy was used to identify alternative seed meals proposed for food and feed formulations. Spectra were collected from cold pressed Camelina (Camelina sativa), Coriander (Coriandrum sativum), and Pennycress (Thlaspi arvense) meals. Additional spectra were collected ...

Using fitness parameters to evaluate three oilseed Brassicaceae species as potential oil crops in two contrasting environments

USDA-ARS?s Scientific Manuscript database

Thlaspi arvense and Camelina sativa have gained considerable attention as biofuel crops. But in some areas, these species, including C. microcarpa, are becoming rare weeds because of agriculture intensification. Including them as crops could guarantee their conservation in agricultural systems. The ...

Arsenic and antimony geochemistry of mine wastes, associated waters and sediments at the Giant Mine, Yellowknife, Northwest Territories, Canada

USGS Publications Warehouse

Fawcett, Skya E.; Jamieson, Heather E.; Nordstrom, D. Kirk; McCleskey, R. Blaine

2015-01-01

Elevated levels of arsenic (As) and antimony (Sb) in water and sediments are legacy residues found downstream from gold-mining activities at the Giant Mine in Yellowknife, Northwest Territories (NWT), Canada. To track the transport and fate of As and Sb, samples of mine-waste from the mill, and surface water, sediment, pore-water, and vegetation downstream of the mine were collected. Mine waste, pore-water, and sediment samples were analyzed for bulk chemistry, and aqueous and solid-state speciation. Sediment and vegetation chemistry were evaluated using scanning electron microscope imaging, synchrotron-based element mapping and electron microprobe analysis. The distributions of As and Sb in sediments were similar, yet their distributions in the corresponding pore-waters were mostly dissimilar, and the mobility of As was greater than that of Sb. Competition for sorption sites is the most likely cause of elevated Sb concentrations in relatively oxidized pore-water and surface water. The aqueous and solid-state speciation of As and Sb also differed. In pore-water, As(V) dominated in oxidizing environments and As(III) in reducing environments. In contrast, the Sb(V) species dominated in all but one pore-water sample, even under reducing conditions. Antimony(III) appears to preferentially precipitate or adsorb onto sulfides as evidenced by the prevalence of an Sb(III)-S secondary solid-phase and the lack of Sb(III)(aq) in the deeper zones. The As(V)–O solid phase became depleted with depth below the sediment–water interface, and the Sb(V)–O phase persisted under relatively reducing conditions. In the surficial zone at a site populated by Equisetum fluviatile (common horsetail), As and Sb were associated with organic material and appeared mobile in the root zone. In the zone below active plant growth, As and Sb were associated primarily with inorganic phases suggesting a release and reprecipitation of these elements upon plant death. The co-existence of reduced

Lubrication properties of new crop oils

USDA-ARS?s Scientific Manuscript database

Oils from new crops such as lesquerella (Lesquerella fendleri), field pennycress (Thlaspi arvense L.), meadowfoam (Limnanthes alba L.), and cuphea PSR-23 (Cuphea viscosissima × Cuphea lanceolata) were investigated and compared with vegetable oils from commodity crops such as castor, corn, and soybea...

Utilizing industrial crops (Pennycress, Camelina, Lesquerella, Cuphea) as novel protein sources

USDA-ARS?s Scientific Manuscript database

Cereals and oilseeds (soybeans) have been the dominant plant protein sources in the food and feed market. However, alternative protein sources are still being sought because of the ongoing upward trend in global protein demand. Pennycress (Thlaspi arvense L.), camelina (Camelina sativa), lesquerella...

Advancements of pennycress as a biofuel and the synthesis of estolides thereof

USDA-ARS?s Scientific Manuscript database

Pennycress (Thlaspi arvense L.) is being developed as an off-season rotation crop between annual corn and soybean production. This rotation scheme may offer distinct advantages to farmers by providing additional farm income from an otherwise fallow season with little impact on the subsequent soybean...

Intensifying production in the northern Corn Belt by incorporating cash cover crops

USDA-ARS?s Scientific Manuscript database

Relay cropping soybean with winter camelina (Camelina sativa L. Crantz) and pennycress (Thlaspi arvense L.) in corn and soybean rotations in the northern Corn Belt, USA provides ecosystem services and is economically viable. However, questions remain regarding the optimum time to interseed these cov...

Synthesis and physical properties of pennycress estolides and esters

USDA-ARS?s Scientific Manuscript database

A new series of pennycress (Thlasphi arvense L.) based free-acid estolides was synthesized by an acid-catalyzed condensation reaction, followed by an esterification reaction to produce the 2-ethylhexyl (2-EH) esters of the initial estolides. The physical properties of the estolides are highly affect...

Yield tradeoffs and nitrogen between pennycress, camelina, and soybean in relay- and double-crop systems

USDA-ARS?s Scientific Manuscript database

To gain additional value from land during winter fallow periods, growers in the Upper Midwest are considering winter annual oilseed crops such as field pennycress (Thlaspi arvense L.) and winter camelina (Camelina sativa L.) as value-added additions to the corn-soybean rotation. The objective of thi...

Strain monitoring for horsetail falls and sylvan bridges

DOT National Transportation Integrated Search

2002-05-01

Fiber optic sensors were installed on two reinforced concrete bridges that had been strengthened with fiber reinforced polymer composites. The primary objective for one of the bridges was to provide strain data to verify a computer model for the brid...

Poisonous Plants. LC Science Tracer Bullet.

ERIC Educational Resources Information Center

Carter, Constance, Comp.

There are a number of sources of information on the more than 700 species of plants, ferns, horsetails, and fungi that can cause toxic, though rarely fatal, reactions in humans and animals. This guide is intended for those who wish to review published materials on poisonous plants in the collections of the Library of Congress. It is not intended…

Aquatic Plant Control Research Program. Allelopathic Aquatic Plants for Aquatic Plant Management: A Feasibility Study

DTIC Science & Technology

1989-10-01

1978. " Ecotoxicology of aquatic plant communi- ties," Principles of Ecotoxicology , SCOPE Report 12, Chapter 11, pp 239-255. [Heavy metals, Pollutants...Phragmites communis and Equisetum limosum were cultivated . They found plant-plant influences depend on soil type. Typha latifolia, S. A2 lacustris, and

Field pennycress: A new oilseed crop for the production of biofuels, lubricants, and high-quality proteins

USDA-ARS?s Scientific Manuscript database

Field pennycress (Thlaspi arvense L.) has numerous positive attributes that make it a very promising industrial oilseed crop. Its short growing season makes it suitable as an off-season crop between corn and soybean production in most of the upper Midwestern U.S. Fall planting of pennycress may also...

Collecting field pennycress germplasm in Colorado and characterization of oil and root variation

USDA-ARS?s Scientific Manuscript database

Field pennycress (Thlaspi arvense) has been identified as a possible source of biodiesel that may perform better in colder climates than other biodiesel fuels. A germplasm collection of the species is being maintained by the U.S. Department of Agriculture for use in research, education, and crop imp...

Cultivar and planting date selection for relay-cropping soybean with winter oilseeds

USDA-ARS?s Scientific Manuscript database

Double- and relay-cropping soybean with winter camelina (Camelina sativa L. Crantz) and pennycress (Thlaspi arvense L.) have been shown to be viable cropping systems for the Upper Midwest. Relaying soybean with these winter oilseeds can result in greater total seed yield (i.e., both combined) and ec...

Five Herbs Plus Thiamine Reduce Pain and Improve Functional Mobility in Patients With Pain: A Pilot Study.

PubMed

Hedaya, Robert

2017-01-01

Context • Five herbs-Urtica dioica (stinging nettle), Boswellia serrata, Equisetum arvense, Allium sativum, and Apium graveolens-have been demonstrated to have activity at several anti-inflammatory pathways and have analgesic properties that are effective in treating chronic musculoskeletal pain. Objectives • The study intended to evaluate the clinical efficacy of a proprietary blend of U dioica, B serrata, E arvense, A sativum, A graveolens, and thiamine (vitamin B1), or "the blend," in the treatment of chronic musculoskeletal pain. Methods • The research team performed a prospective case study. Setting • The study took place at the National Center for Whole Psychiatry in Chevy Chase, MD, USA. Participants were patients who had experienced baseline persistent musculoskeletal pain for at least 4 mo in ≥1 body parts without relief from traditional treatments. Intervention • Participants were provided with a 14-d supply of the study's medication. Two 350-mg capsules were administered 2 ×/d with food. The participants were instructed not to alter or add any therapies for their pain-associated condition for the 14 d of the study. Outcome Measures • The primary outcome measure was the change on a subjectively scored visual analogue scale (VAS), similar to the Western Ontario and McMaster Universities Osteoarthritis Index. The VAS was used to assess pain and the impact of motion and mobility at each location with pain. Each patient was administered the VAS rating scale to assess physical function and pain status at baseline and at the end of 14 d or postintervention. Patients were seen for follow-up at a minimum of 2 wk and underwent an interview, with the VAS rating scale being readministered. Results • A total of 13 patients, involving 27 pain sites, qualified for the study, 5 males and 8 females with a median age of 58 y. The primary sites of pain were (1) the knees-5 sites (18.5%), (2) the shoulders-6 sites (16.6%), and (3) the back (sciatica)-5

Traditional medicine in Sakarya province (Turkey) and antimicrobial activities of selected species.

PubMed

Uzun, Ergin; Sariyar, Günay; Adsersen, Anne; Karakoc, Berna; Otük, Gülten; Oktayoglu, Ercan; Pirildar, Sevda

2004-12-01

Traditional medicine in North-West of Turkey (Sakarya province) were studied during a 2 months field study by interviewing local informants from several villages. Plant species used to treat infections were tested for antimicrobial activity. Information was collected for 46 plant species from 30 families and for 5 animal species. Twenty four of the plant species were cultivated. Most used families were Asteraceae, Cucurbitaceae, Lamiaceae and Rosaceae and the most used plants were Artemisia absinthium, Equisetum telmateia, Lavandula stoechas, Melissa officinalis, Tussilago farfara and Urtica dioica. A total of 139 medicinal uses were obtained. Plants are used mainly for infectious diseases (18%), for neurological and psychological disorders (13.7%), cardiovascular disorders (13%), skin disorders (12.2%) and respiratory disorders (10.1%). Extracts were tested in vitro for antimicrobial activity against Staphylococcus aureus ATCC 65538, Staphylococcus epidermidis ATCC 12228, Escherichia coli ATCC 8739, Klebsiella pneumonia ATCC 4352, Pseudomonas aeruginosa ATCC 1539, Salmonella typhi, Shigella flexneri, Proteus mirabilis and Candida albicans ATCC 10231, using microbroth dilution technique according to National Committee for Clinical Laboratory Standards (NCCLS). This research showed that Arum maculatum, Datura stramonium, Geranium asphodeloides and Equisetum telmateia petroleum ether extracts had MIC values of 39.1 microg/ml, 78.1 microg/ml, 78.1 microg/ml and 39.1 microg/ml, respectively against Staphylococcus epidermidis. Datura stramonium petroleum ether extract had a MIC value of 39.1 microg/ml against Escherichia coli and Trachystemon orientalis ethanol extract had a MIC value of 39.1 microg/ml against Escherichia coli. The antimicrobial activity of Arum maculatum, Equisetum telmateia, Geranium asphodeloides, Plantago intermedia, Senecio vulgaris and Trachystemon orientalis has been reported here for the first time.

Effect of heavy metals on seed germination and seedling growth of common ragweed and roadside ground cover legumes.

PubMed

Bae, Jichul; Benoit, Diane L; Watson, Alan K

2016-06-01

In southern Québec, supplement roadside ground covers (i.e. Trifolium spp.) struggle to establish near edges of major roads and thus fail to assist turf recruitment. It creates empty niches vulnerable to weed establishment such as common ragweed (Ambrosia artemisiifolia). We hypothesized that heavy metal stresses may drive such species shifts along roadside edges. A growth chamber experiment was conducted to assess effects of metals (Zn, Pb, Ni, Cu, and Cd) on germination and seedling behaviors of roadside weed (A. artemisiifolia) and ground cover legumes (Coronilla varia, Lotus corniculatus, and Trifolium arvense). All metals inhibited T. arvense germination, but the effect was least on A. artemisiifolia. Low levels of Pb and Ni promoted germination initiation of A. artemisiifolia. Germination of L. corniculatus was not affected by Zn, Pb, and Ni, but inhibited by Cu and Cd. Germination of C. varia was decreased by Ni, Cu, and Cd and delayed by Zn and Pb. Metal additions hindered seedling growth of all test species, and the inhibitory effect on the belowground growth was greater than on the aboveground growth. Seedling mortality was lowest in A. artemisiifolia but highest in T. arvense when exposed to the metal treatments. L. corniculatus and C. varia seedlings survived when subjected to high levels of Zn, Pb, and Cd. In conclusion, the successful establishment of A. artemisiifolia along roadside edges can be associated with its greater tolerance of heavy metals. The findings also revealed that L. corniculatus is a potential candidate for supplement ground cover in metal-contaminated roadside edges in southern Québec, especially sites contaminated with Zn and Pb. Copyright © 2015 Elsevier Ltd. All rights reserved.

Horsetail matching: a flexible approach to optimization under uncertainty

NASA Astrophysics Data System (ADS)

Cook, L. W.; Jarrett, J. P.

2018-04-01

It is important to design engineering systems to be robust with respect to uncertainties in the design process. Often, this is done by considering statistical moments, but over-reliance on statistical moments when formulating a robust optimization can produce designs that are stochastically dominated by other feasible designs. This article instead proposes a formulation for optimization under uncertainty that minimizes the difference between a design's cumulative distribution function and a target. A standard target is proposed that produces stochastically non-dominated designs, but the formulation also offers enough flexibility to recover existing approaches for robust optimization. A numerical implementation is developed that employs kernels to give a differentiable objective function. The method is applied to algebraic test problems and a robust transonic airfoil design problem where it is compared to multi-objective, weighted-sum and density matching approaches to robust optimization; several advantages over these existing methods are demonstrated.

Application of the EDYS Model to Evaluate Control Methods for Invasive Plants at Fort Carson, Colorado

DTIC Science & Technology

2004-12-01

Centaurea maculosa , CHGR15 is Bouteloua gracilis, HEAN3 is Helianthus annuus, MEOF is Melilotus officinalis, PASM is Pascopyrum smithii, SPCR is Sporobolus...second site was invaded by spotted knapweed (Centaurea maculosa ) and was located along Little Turkey Creek adjacent to the Turkey Creek Recreation Area...airoides Sporobolus cryptandrus Nassella viridula Ambrosia psilostachya Centaurea maculosa Cirsium arvense Convolvulus arvensis Gaura coccinea

Compilation of Annual Reports of the Navy ELF (Extremely Low Frequency) Communications System Ecological Monitoring Program (1983). Volume 2. Tabs F-J.

DTIC Science & Technology

1984-07-01

POSITAE C. rugosa *Arctiumn minus CON VOLULACEAE * .Centaurea maculosa , Convolviliis Cirsium arvense (several possible) C. discolor CRASSULACEAE C. hill...Heracleum lanatumn A. umbllatusHieraciumn aurantiacum - A. sp. I H. florentinumn A. sp. 2 H. pratense A. sp. 3 Hypericumn perforatumn Centaurea maculosa H...Hypericumn perforatumn Aster umbellatus Lychnis alba Aster sp. I Melilotus alba *Centaurea maculosa Oenethera biennis Chrysanthemum leucanthemnum Prunus

[Herbological studies on Chinese crude drug Ma-huang. Part 1-On the botanical origin of Ma-huang in ancient China and the origin of Japanese Ma-huang].

PubMed

Yoshizawa, Chieko; Kitade, Makiko; Mikage, Masayuki

2005-01-01

The botanical origin of a Chinese crude drug Ma-huang in ancient China and the origin of Japanese Ma-huang were herbologically studied. The results showed that the plants of Ephedra sinica Stapf, E. intermedia Schrenk & C. A. Meyer and E. equisetina Bunge were used as Ma-huang in China, and the first species was considered to be of high quality. The characters of Mao-zhou Ma-huang and Tong-zhou Ma-huang printed in Tu-jing-ben-cao, published in the Song Dynasty in China, were identified as E. likiangensis Florin and E. intermedia, respectively, and both species were recognized as excellent Ma-huang in the Ming Dynasty. The word origin of Katsune-kusa, the Japanese name for Ma-huang in the Heian Era, was etymologically considered as meaning the plant having reddish brown roots. In Japan, the plant of Equisetum ramosissimum Desf. var.japonicum Milde, of the family Equisetaceae, was substituted for Ma-huang in the middle of Edo Era, and it was designated that this action was based on the confusion of Ephedra plants and Equisetum plants those days in China.

Organic parasite control for poultry and rabbits in British Columbia, Canada

PubMed Central

2011-01-01

Plants used for treating endo- and ectoparasites of rabbits and poultry in British Columbia included Arctium lappa (burdock), Artemisia sp. (wormwood), Chenopodium album (lambsquarters) and C. ambrosioides (epazote), Cirsium arvense (Canada thistle), Juniperus spp. (juniper), Mentha piperita (peppermint), Nicotiana sp. (tobacco), Papaver somniferum (opium poppy), Rubus spp. (blackberry and raspberry relatives), Symphytum officinale (comfrey), Taraxacum officinale (common dandelion), Thuja plicata (western redcedar) and Urtica dioica (stinging nettle). PMID:21756341

Secondary Fracturing of Europa's Crust in Response to Combined Slip and Dilation Along Strike-Slip Faults

NASA Technical Reports Server (NTRS)

Kattenhorn, S. A.

2003-01-01

A commonly observed feature in faulted terrestrial rocks is the occurrence of secondary fractures alongside faults. Depending on exact morphology, such fractures have been termed tail cracks, wing cracks, kinks, or horsetail fractures, and typically form at the tip of a slipping fault or around small jogs or steps along a fault surface. The location and orientation of secondary fracturing with respect to the fault plane or the fault tip can be used to determine if fault motion is left-lateral or right-lateral.

Potential pitfalls in the nuclear medicine imaging: Experimental models to evaluate the effect of natural products on the radiolabeling of blood constituents, bioavailability of radiopharmaceutical and on the survival of Escherichia coli strains submitted to the treatment with stannous ion

NASA Astrophysics Data System (ADS)

Soares, Scheila F.; Brito, Lavínia C.; Souza, Deise E.; Bernardo, Luciana C.; Oliveira, Joelma F.; Bernardo-Filho, Mario

2006-12-01

Single photon emission computed tomography (SPECT) allows studies of physiological or pathological processes. Red blood cells labeled with technetium-99m ( 99mTc-RBC) are used as a radiopharmaceutical in several evaluations. The radiolabeling efficiency and bioavailability of radiopharmaceuticals can be altered by natural/synthetic drugs and may induce pitfalls in the analysis of the nuclear medicine imaging. The labeling with 99mTc requires a reducing agent and stannous chloride (SnCl 2) is widely utilized. However, SnCl 2 presents a citotoxic and/or genotoxic potential in Escherichia coli ( E. coli) strains. The aim of this work was to evaluate the influence of aqueous extracts of Baccharis genistelloides (BG), Terminalia chebula (TC), Maytenus ilicifolia (MI), Cassia angustifolia (CA) and Equisetum arvense (EA) on (i) radiolabeling of blood constituents, (ii) bioavailability of sodium pertechnetate(Na 99mTcO 4) radiopharmaceutical, (iii) survival of E. coli. In vitro labeling of RBC was performed with blood ( Wistar rats) incubated with each extract, SnCl 2 and Na 99mTcO 4. Plasma (P) and blood cells (BC) were isolated, another aliquots precipitated and soluble (SF) and insoluble (IF) fractions isolated and counted. In the bioavailability of Na 99mTcO 4, Wistar rats were treated (7 days) with aqueous extract or with 0.9%NaCl, the radiopharmaceutical was administered, the animals sacrificed, the organs isolated, weighted and radioactivity counted. To evaluate the effect on the bacterial survival, E. coli was treated with: (a) SnCl 2; (b) 0.9% NaCl; (c) vegetal extract; or (d) SnCl 2 and vegetal extract. Radiolabeling efficiency showed a significantly decrease (ANOVA/Tukey post-test, p<0.05) after treatment with BG, TC, MI and CA extracts. The bioavailability results showed that the uptake of Na 99mTcO 4 was altered significantly (unpaired t-student test, p<0.05) in blood, lungs (CA/TC extracts), bone, heart, ovary (EA /TC), spleen, kidney (TC) , pancreas, thyroid

Kynurenic acid content in anti-rheumatic herbs.

PubMed

Zgrajka, Wojciech; Turska, Monika; Rajtar, Grażyna; Majdan, Maria; Parada-Turska, Jolanta

2013-01-01

The use of herbal medicines is common among people living in rural areas and increasingly popular in urbanized countries. Kynurenic acid (KYNA) is a metabolite of kynurenine possessing anti-inflammatory, anti-oxidative and pain reliving properties. Previous data indicated that the content of KYNA in the synovial fluid of patients with rheumatoid arthritis is lower than in patients with osteoarthritis. Rheumatoid arthritis is a chronic, systemic inflammatory disorder affecting about 1% of the world's population. The aim of the presented study was to investigate the content of KYNA in 11 herbal preparations used in rheumatic diseases. The following herbs were studied: bean pericarp, birch leaf, dandelion root, elder flower, horsetail herb, nettle leaf, peppermint leaf and willow bark. An anti-rheumatic mixture of the herbs Reumatefix and Reumaflos tea were also investigated. The herbs were prepared according to producers' directions. In addition, the herbal supplement Devil's Claw containing root of Harpagophytum was used. KYNA content was measured using the high-performance liquid chromatography method, and KYNA was detected fluorometrically. KYNA was found in all studied herbal preparations. The highest content of KYNA was found in peppermint, nettle, birch leaf and the horsetail herb. The lowest content of KYNA was found in willow bark, dandelion root and in the extract from the root of Harpagophytum. These findings indicate that the use of herbal preparations containing a high level of KYNA can be considered as a supplementary measure in rheumatoid arthritis therapy, as well as in rheumatic diseases prevention.

Constitutively Elevated Salicylic Acid Signals Glutathione-Mediated Nickel Tolerance in Thlaspi Nickel Hyperaccumulators1

PubMed Central

Freeman, John L.; Garcia, Daniel; Kim, Donggiun; Hopf, Amber; Salt, David E.

2005-01-01

Progress is being made in understanding the biochemical and molecular basis of nickel (Ni)/zinc (Zn) hyperaccumulation in Thlaspi; however, the molecular signaling pathways that control these mechanisms are not understood. We observed that elevated concentrations of salicylic acid (SA), a molecule known to be involved in signaling induced pathogen defense responses in plants, is a strong predictor of Ni hyperaccumulation in the six diverse Thlaspi species investigated, including the hyperaccumulators Thlaspi goesingense, Thlaspi rosulare, Thlaspi oxyceras, and Thlaspi caerulescens and the nonaccumulators Thlaspi arvense and Thlaspi perfoliatum. Furthermore, the SA metabolites phenylalanine, cinnamic acid, salicyloyl-glucose, and catechol are also elevated in the hyperaccumulator T. goesingense when compared to the nonaccumulators Arabidopsis (Arabidopsis thaliana) and T. arvense. Elevation of free SA levels in Arabidopsis, both genetically and by exogenous feeding, enhances the specific activity of serine acetyltransferase, leading to elevated glutathione and increased Ni resistance. Such SA-mediated Ni resistance in Arabidopsis phenocopies the glutathione-based Ni tolerance previously observed in Thlaspi, suggesting a biochemical linkage between SA and Ni tolerance in this genus. Intriguingly, the hyperaccumulator T. goesingense also shows enhanced sensitivity to the pathogen powdery mildew (Erysiphe cruciferarum) and fails to induce SA biosynthesis after infection. Nickel hyperaccumulation reverses this pathogen hypersensitivity, suggesting that the interaction between pathogen resistance and Ni tolerance and hyperaccumulation may have played a critical role in the evolution of metal hyperaccumulation in the Thlaspi genus. PMID:15734913

Effects of nettle slurry (Urtica dioica L.) used as foliar fertilizer on potato (Solanum tuberosum L.) yield and plant growth

PubMed Central

Raigón, María Dolores; Marques, Olmo; Ferriol, María; Royo, Jorge

2018-01-01

Organic agriculture is becoming increasingly important, and many natural products are now available for organic farmers to manage and improve their crops. Several ethnobotanical studies have indicated that the use of nettle slurry as fertilizer in organic farming for horticultural crops is spreading. Sometimes, however, the consequences of using these natural products have been poorly evaluated, and there is very little scientific evidence for the effects of using these slurries. In this study, we aimed to analyze the possible effect of nettle slurry on potato yields produced by organic farming. To achieve this main objective, we assessed the effect of nettle slurry on potato yields, plant size and growth parameters, chlorophyll content, and the presence of pests and diseases. Different slurry doses were assessed in 36 plots and nine variables were measured during the crop cycle. Under these field experimental conditions, nettle slurry (including one treatment with Urtica in combination with Equisetum) had no significant effects on yield, chlorophyll content, or the presence of pests and diseases in organic potato crops. The highest chlorophyll content was found in the double dose treatment, but the difference was not significant. This result, together with a small improvement in plant height with the double dose treatment, might indicate very slight crop enhancement which, under our experimental conditions, was not enough to improve yield. The Urtica and Equisetum slurry chemical analyses showed very low levels of nitrogen, phosphorus, and potassium. PMID:29761049

Development of a non-dormant germplasm from Thlaspi Arvense (Pennycress)

USDA-ARS?s Scientific Manuscript database

Pennycress is being developed as an off-season rotation crop between annual corn and soybean production. This rotation scheme may offer distinct advantages to farmers by providing additional farm income from an otherwise fallow season with little impact on the subsequent soybean production. The seed...

[Effect of medicinal plant extracts on the growth of microorganisms].

PubMed

Baronets, N G; Adlova, G P; Mel'nikova, V A

2001-01-01

Extracts obtained from sweatweed and licorice roots, flax seeds, milfoil, bur-marigold, plantain, coltsfoot, nettle, Indian corn stigmas, laminaria produced a stimulating effect on the growth of Candida albicans test strain and Streptococcus pyogenes test strain Dick 1. Sweatweed, licorice, Aerva lanata and violet extracts influenced the growth of Corynebacterium xerosis 1911, while sweatweed, violet, horse-tail, bur-marigold, camomile, plantain, and nettle extracts influenced the growth of shigellae. The stimulating effect could be supposedly produced by biologically active substances contained in medicinal plants (organic acids, alkaloids, carotinoids, vitamins, microelements). Further studies aimed at the identification of substances producing the stimulating effect are planned.

The potential medicinal value of plants from Asteraceae family with antioxidant defense enzymes as biological targets.

PubMed

Koc, Suheda; Isgor, Belgin S; Isgor, Yasemin G; Shomali Moghaddam, Naznoosh; Yildirim, Ozlem

2015-05-01

Plants and most of the plant-derived compounds have long been known for their potential pharmaceutical effects. They are well known to play an important role in the treatment of several diseases from diabetes to various types of cancers. Today most of the clinically effective pharmaceuticals are developed from plant-derived ancestors in the history of medicine. The aim of this study was to evaluate the free radical scavenging activity and total phenolic and flavonoid contents of methanol, ethanol, and acetone extracts from flowers and leaves of Onopordum acanthium L., Carduus acanthoides L., Cirsium arvense (L.) Scop., and Centaurea solstitialis L., all from the Asteraceae family, for investigating their potential medicinal values of biological targets that are participating in the antioxidant defense system such as catalase (CAT), glutathione S-transferase (GST), and glutathione peroxidase (GPx). In this study, free radical scavenging activity and total phenolic and flavonoid contents of the plant samples were assayed by DPPH, Folin-Ciocalteu, and aluminum chloride colorimetric methods. Also, the effects of extracts on CAT, GST, and GPx enzyme activities were investigated. The highest phenolic and flavonoid contents were detected in the acetone extract of C. acanthoides flowers, with 90.305 mg GAE/L and 185.43 mg Q/L values, respectively. The highest DPPH radical scavenging was observed with the methanol leaf extracts of C. arvense with an IC50 value of 366 ng/mL. The maximum GPx and GST enzyme inhibition activities were observed with acetone extracts from the flower of C. solstitialis with IC50 values of 79 and 232 ng/mL, respectively.

Serpentine endophytic bacterium Pseudomonas azotoformans ASS1 accelerates phytoremediation of soil metals under drought stress.

PubMed

Ma, Ying; Rajkumar, Mani; Moreno, António; Zhang, Chang; Freitas, Helena

2017-10-01

This study evaluates the potential of serpentine endophytic bacterium to foster phytoremediation efficiency of Trifolium arvense grown on multi-metal (Cu, Zn and Ni) contaminated soils under drought stress. A drought resistant endophytic bacterial strain ASS1 isolated from the leaves of Alyssum serpyllifolium grown in serpentine soils was identified as Pseudomonas azotoformans based on biochemical tests and partial 16S rRNA gene sequencing. P. azotoformans ASS1 possessed abiotic stress resistance (heavy metals, drought, salinity, antibiotics and extreme temperature) and plant growth promoting (PGP) properties (phosphate solubilization, nitrogen fixation, production of 1-aminocyclopropane-1-carboxylate deaminase, siderophore and ammonia). Inoculation of T. arvense with ASS1 considerably increased the plant biomass and leaf relative water content in both roll towel assay and pot experiments in the absence and presence of drought stress (DS). In the pot experiments, ASS1 greatly enhanced chlorophyll content, catalase, peroxidase, superoxide dismutase activities, and proline content (only in the absence of drought) in plant leaves, whereas they decreased the concentrations of malondialdehyde. Irrespective of water stress, ASS1 significantly improved accumulation, total removal, bio-concentration factor and biological accumulation coefficient of metals (Cu, Zn and Ni), while decreased translocation factors of Cu. The effective colonization and survival in the rhizosphere and tissue interior assured improved plant growth and successful metal phytoremediation under DS. These results demonstrate the potential of serpentine endophytic bacterium ASS1 for protecting plants against abiotic stresses and helping plants to thrive in semiarid ecosystems and accelerate phytoremediation process in metal polluted soils. Copyright © 2017 Elsevier Ltd. All rights reserved.

Previously unrecognized now-inactive strand of the North Anatolian fault in the Thrace basin

DOE Office of Scientific and Technical Information (OSTI.GOV)

Perincek, D.

1988-08-01

The North Anatolian fault is a major 1,200 km-long transform fault bounding the Anatolian plate to the north. It formed in late middle Miocene time as a broad shear zone with a number of strands splaying westward in a horsetail fashion. Later, movement became localized along the stem, and the southerly and northerly splays became inactive. One such right-lateral, now-inactive splay is the west-northwest-striking Thrace strike-slip fault system, consisting of three subparallel strike-slip faults. From north to south these are the Kirklareli, Lueleburgaz, and Babaeski fault zones, extending {plus minus} 130 km along the strike. The Thrace fault zone probablymore » connected with the presently active northern strand of the North Anatolian fault in the Sea of Marmara in the southeast and may have joined the Plovdiv graben zone in Bulgaria in the northwest. The Thrace basin in which the Thrace fault system is located, is Cenozoic with a sedimentary basin fill from middle Eocene to Pliocene. The Thrace fault system formed in pre-Pliocene time and had become inactive by the Pliocene. Strike-slip fault zones with normal and reverse separation are detected by seismic reflection profiles and subsurface data. Releasing bend extensional structures (e.g., near the town of Lueleburgaz) and restraining bend compressional structures (near Vakiflar-1 well) are abundant on the fault zones. Umurca and Hamitabad fields are en echelon structures on the Lueleburgaz fault zone. The Thrace strike-slip fault system has itself a horsetail shape, the various strands of which become younger southward. The entire system died before the Pliocene, and motion on the North Anatolian fault zone began to be accommodated in the Sea of Marmara region. Thus the Thrace fault system represents the oldest strand of the North Anatolian fault in the west.« less

Evolutionary genomics revealed interkingdom distribution of Tcn1-like chromodomain-containing Gypsy LTR retrotransposons among fungi and plants.

PubMed

Novikova, Olga; Smyshlyaev, Georgiy; Blinov, Alexander

2010-04-08

Chromodomain-containing Gypsy LTR retrotransposons or chromoviruses are widely distributed among eukaryotes and have been found in plants, fungi and vertebrates. The previous comprehensive survey of chromoviruses from mosses (Bryophyta) suggested that genomes of non-seed plants contain the clade which is closely related to the retrotransposons from fungi. The origin, distribution and evolutionary history of this clade remained unclear mainly due to the absence of information concerning the diversity and distribution of LTR retrotransposons in other groups of non-seed plants as well as in fungal genomes. In present study we preformed in silico analysis of chromodomain-containing LTR retrotransposons in 25 diverse fungi and a number of plant species including spikemoss Selaginella moellendorffii (Lycopodiophyta) coupled with an experimental survey of chromodomain-containing Gypsy LTR retrotransposons from diverse non-seed vascular plants (lycophytes, ferns, and horsetails). Our mining of Gypsy LTR retrotransposons in genomic sequences allowed identification of numerous families which have not been described previously in fungi. Two new well-supported clades, Galahad and Mordred, as well as several other previously unknown lineages of chromodomain-containing Gypsy LTR retrotransposons were described based on the results of PCR-mediated survey of LTR retrotransposon fragments from ferns, horsetails and lycophytes. It appeared that one of the clades, namely Tcn1 clade, was present in basidiomycetes and non-seed plants including mosses (Bryophyta) and lycophytes (genus Selaginella). The interkingdom distribution is not typical for chromodomain-containing LTR retrotransposons clades which are usually very specific for a particular taxonomic group. Tcn1-like LTR retrotransposons from fungi and non-seed plants demonstrated high similarity to each other which can be explained by strong selective constraints and the 'retained' genes theory or by horizontal transmission.

Characterizing sub-arctic peatland vegeation using height estimates from structure from motion and an unmanned aerial system (UAS)

NASA Astrophysics Data System (ADS)

Palace, M. W.; DelGreco, J.; Herrick, C.; Sullivan, F.; Varner, R. K.

2017-12-01

The collapse of permafrost, due to thawing, changes landscape topography, hydrology and vegetation. Changes in plant species composition influence methane production pathways and methane emission rates. The complex spatial heterogeneity of vegetation composition across peatlands proves important in quantifying methane emissions. Effort to characterize vegetation across these permafrost peatlands has been conducted with varied success, with difficulty seen in estimating some cover types that are at opposite ends of the permafrost collapse transition, ie palsa/tall shrub and tall graminoid. This is because some of the species are the same (horsetail) and some of the species have similar structure (horsetail/Carex spp.). High resolution digital elevation maps, developed with airborne LIght Detection And Ranging (lidar) have provided insight into some wetland attributes, but lidar collection is costly and requires extensive data processing effort. Lidar information also lacks the spectral information that optical sensors provide. We used an inexpensive Unmanned Aerial Vehicle (UAV) with an optical sensor to image a mire in northern Sweden (Stordalen Mire) in 2015. We collected 700 overlapping images that were stitched together using Structure from Motion (SfM). SfM analysis also provided, due to parallax, the ability to develop a height map of vegetation. This height map was used, along with textural analysis, to develop an artificial neural network to predict five vegetation cover types. Using 200 training points, we found improvements in our prediction of these cover types. We suggest that using the digital height model from SfM provides useful information in remotely sensing vegetation across a permafrost collapsing region that exhibit resulting changes in vegetation composition. The ability to rapidly and inexpensively deploy such a UAV system provides the opportunity to examine multiple sites with limited personnel effort in remote areas.

Meat-eating by a wild Bornean orang-utan (Pongo pygmaeus).

PubMed

Buckley, Benjamin J W; Dench, Rosalie J; Morrogh-Bernard, Helen C; Bustani, Unyil; Chivers, David J

2015-10-01

We present the first evidence for consumption of meat by a wild Bornean orang-utan (Pongo pygmaeus). Meat-eating has been reported in Sumatran orang-utans, specifically the hunting and consumption of slow lorises (Nycticebus coucang), but loris-hunting behaviour has not been observed in the Bornean species and meat of any species is essentially absent from their diet, with only two anecdotal reports of vertebrate meat consumption prior to this current finding in over 40 years of study. In August 2012 an unhabituated adult flanged male orang-utan was observed eating an adult horse-tailed squirrel (Sundasciurus hippurus) carcass in the Sabangau peat-swamp forest, Central Kalimantan. We suspect this to be a case of scavenging, never reported previously in a Bornean orang-utan.

Nickel and zinc isotope fractionation in hyperaccumulating and nonaccumulating plants.

PubMed

Deng, Teng-Hao-Bo; Cloquet, Christophe; Tang, Ye-Tao; Sterckeman, Thibault; Echevarria, Guillaume; Estrade, Nicolas; Morel, Jean-Louis; Qiu, Rong-Liang

2014-10-21

Until now, there has been little data on the isotope fractionation of nickel (Ni) in higher plants and how this can be affected by plant Ni and zinc (Zn) homeostasis. A hydroponic cultivation was conducted to investigate the isotope fractionation of Ni and Zn during plant uptake and translocation processes. The nonaccumulator Thlaspi arvense, the Ni hyperaccumulator Alyssum murale and the Ni and Zn hyperaccumulator Noccaea caerulescens were grown in low (2 μM) and high (50 μM) Ni and Zn solutions. Results showed that plants were inclined to absorb light Ni isotopes, presumably due to the functioning of low-affinity transport systems across root cell membrane. The Ni isotope fractionation between plant and solution was greater in the hyperaccumulators grown in low Zn treatments (Δ(60)Ni(plant-solution) = -0.90 to -0.63‰) than that in the nonaccumulator T. arvense (Δ(60)Ni(plant-solution) = -0.21‰), thus indicating a greater permeability of the low-affinity transport system in hyperaccumulators. Light isotope enrichment of Zn was observed in most of the plants (Δ(66)Zn(plant-solution) = -0.23 to -0.10‰), but to a lesser extent than for Ni. The rapid uptake of Zn on the root surfaces caused concentration gradients, which induced ion diffusion in the rhizosphere and could result in light Zn isotope enrichment in the hyperaccumulator N. caerulescens. In high Zn treatment, Zn could compete with Ni during the uptake process, which reduced Ni concentration in plants and decreased the extent of Ni isotope fractionation (Δ(60)Ni(plant-solution) = -0.11 to -0.07‰), indicating that plants might take up Ni through a low-affinity transport system of Zn. We propose that isotope composition analysis for transition elements could become an empirical tool to study plant physiological processes.

Effective landscape scale management of Cirsium arvense (Canada thistle) utilizing biological control

Treesearch

G. P. Markin; D. Larson

2013-01-01

The stem mining weevil, Ceutorhynchus litura Fabricius, the gall forming fly, Urophora cardui L., and the seedhead weevil, Larinus planus Fabricius, were established as biological control agents on an 1800 hectare multiple-habitat wildlife refuge in northwestern Oregon in the mid-1990s. At the time, Canada thistle was the most wide spread, aggressive, and difficult...

Effects of emergency haying on vegetative characteristics within selected Conservation Reserve Program fields in the Northern Great Plains

USGS Publications Warehouse

Allen, A.W.; Cade, B.S.; Vandever, M.W.

2001-01-01

Successional changes in vegetation composition within seeded grasslands may effect attainment of long term conservaation objectives. Comparisons between vegetation composition within Conservation Reserve Program (CRP) fields planted to cool season, introduced grasses hayed for emergency we, and non hayed fields of the same age and species composition were completed to determine potential effects of periodic haying. Emergency haying had little long term effect on vegetation height/density, percent cover of live pass, or forb cover when compared to characteristics within non hayed fields?. The presence of legumes [primarily alfalfa (Medicago sativa L)] increased in response to haying, whereas, abundance of noxious weeds [chiefly Canada thistle (Cirsium arvense (L) Scop.)] diminished. Implications for long term management CRP grassland to achieve wildlife habitat objectives are discussed.

Thlaspi arvense (Pennycress): An off-season energy crop within the corn-soybean rotation

USDA-ARS?s Scientific Manuscript database

Pennycress is being developed as an off-season rotation crop between annual corn and soybean production. This rotation scheme may offer distinct advantages to farmers by providing additional farm income from an otherwise fallow season with little impact on the subsequent soybean production. The seed...

The late Cretaceous Arman flora of Magadan oblast, Northeastern Russia

NASA Astrophysics Data System (ADS)

Herman, A. B.; Golovneva, L. B.; Shczepetov, S. V.; Grabovsky, A. A.

2016-12-01

The Arman flora from the volcanogenic-sedimentary beds of the Arman Formation is systematically studied using materials from the Arman River basin and the Nelkandya-Khasyn interfluve (Magadan oblast, Northeastern Russia). Seventy-three species of fossil plants belonging to 49 genera are described. They consist of liverworts, horsetails, ferns, seed ferns, cycadaleans, bennettitaleans, ginkgoaleans, czekanowskialeans, conifers, gymnosperms of uncertain systematic affinity, and angiosperms. The Arman flora shows a unique combination, with relatively ancient Early Cretaceous ferns and gymnosperms occurring alongside younger Late Cretaceous plants, primarily angiosperms. The similarity of the Arman flora to the Penzhina and Kaivayam floras of northwestern Kamchatka and the Tylpegyrgynai flora of the Pekul'nei Ridge allows the Arman flora to be dated as Turonian and Coniacian (Late Cretaceous), which is corroborated by isotopic (U-Pb and 40Ar/39Ar) age determination for the plant-bearing layers.

Reintroduction of rare arable plants by seed transfer. What are the optimal sowing rates?

PubMed

Lang, Marion; Prestele, Julia; Fischer, Christina; Kollmann, Johannes; Albrecht, Harald

2016-08-01

During the past decades, agro-biodiversity has markedly declined and some species are close to extinction in large parts of Europe. Reintroduction of rare arable plant species in suitable habitats could counteract this negative trend. The study investigates optimal sowing rates of three endangered species (Legousia speculum-veneris (L.) Chaix, Consolida regalis Gray, and Lithospermum arvense L.), in terms of establishment success, seed production, and crop yield losses.A field experiment with partial additive design was performed in an organically managed winter rye stand with study species added in ten sowing rates of 5-10,000 seeds m(-2). They were sown as a single species or as a three-species mixture (pure vs. mixed sowing) and with vs. without removal of spontaneous weeds. Winter rye was sown at a fixed rate of 350 grains m(-2). Performance of the study species was assessed as plant establishment and seed production. Crop response was determined as grain yield.Plant numbers and seed production were significantly affected by the sowing rate, but not by sowing type (pure vs. mixed sowing of the three study species), and weed removal. All rare arable plant species established and reproduced at sowing rates >25 seeds m(-2), with best performance of L. speculum-veneris. Negative density effects occurred to some extent for plant establishment and more markedly for seed production.The impact of the three study species on crop yield followed sigmoidal functions. Depending on the species, a yield loss of 10% occurred at >100 seeds m(-2). Synthesis and applications: The study shows that reintroduction of rare arable plants by seed transfer is a suitable method to establish them on extensively managed fields, for example, in organic farms with low nutrient level and without mechanical weed control. Sowing rates of 100 seeds m(-2) for C. regalis and L. arvense, and 50 seeds m(-2) for L. speculum-veneris are recommended, to achieve successful establishment

Antibacterial screening of some Peruvian medicinal plants used in Callería District.

PubMed

Kloucek, P; Polesny, Z; Svobodova, B; Vlkova, E; Kokoska, L

2005-06-03

Nine ethanol extracts of Brunfelsia grandiflora (Solanaceae), Caesalpinia spinosa (Caesalpiniaceae), Dracontium loretense (Araceae), Equisetum giganteum (Equisetaceae), Maytenus macrocarpa (Celastraceae), Phyllanthus amarus (Euphorbiaceae), Piper aduncum (Piperaceae), Terminalia catappa (Combretaceae), and Uncaria tomentosa (Rubiaceae), medicinal plants traditionally used in Calleria District for treating conditions likely to be associated with microorganisms, were screened for antimicrobial activity against nine bacterial strains using the broth microdilution method. Among the plants tested, Phyllanthus amarus and Terminalia catappa showed the most promising antibacterial properties, inhibiting all of the strains tested with minimum inhibitory concentrations (MICs) ranging from 0.25 to 16 mg/ml. The extract from aerial part of Piper aduncum was significantly more active against Gram-positive (MICs ranging from 1 to 2 mg/ml) than against Gram-negative bacteria (MICs > 16 mg/ml).

The Sorong Fault Zone, Indonesia: Mapping a Fault Zone Offshore

NASA Astrophysics Data System (ADS)

Melia, S.; Hall, R.

2017-12-01

The Sorong Fault Zone is a left-lateral strike-slip fault zone in eastern Indonesia, extending westwards from the Bird's Head peninsula of West Papua towards Sulawesi. It is the result of interactions between the Pacific, Caroline, Philippine Sea, and Australian Plates and much of it is offshore. Previous research on the fault zone has been limited by the low resolution of available data offshore, leading to debates over the extent, location, and timing of movements, and the tectonic evolution of eastern Indonesia. Different studies have shown it north of the Sula Islands, truncated south of Halmahera, continuing to Sulawesi, or splaying into a horsetail fan of smaller faults. Recently acquired high resolution multibeam bathymetry of the seafloor (with a resolution of 15-25 meters), and 2D seismic lines, provide the opportunity to trace the fault offshore. The position of different strands can be identified. On land, SRTM topography shows that in the northern Bird's Head the fault zone is characterised by closely spaced E-W trending faults. NW of the Bird's Head offshore there is a fold and thrust belt which terminates some strands. To the west of the Bird's Head offshore the fault zone diverges into multiple strands trending ENE-WSW. Regions of Riedel shearing are evident west of the Bird's Head, indicating sinistral strike-slip motion. Further west, the ENE-WSW trending faults turn to an E-W trend and there are at least three fault zones situated immediately south of Halmahera, north of the Sula Islands, and between the islands of Sanana and Mangole where the fault system terminates in horsetail strands. South of the Sula islands some former normal faults at the continent-ocean boundary with the North Banda Sea are being reactivated as strike-slip faults. The fault zone does not currently reach Sulawesi. The new fault map differs from previous interpretations concerning the location, age and significance of different parts of the Sorong Fault Zone. Kinematic

Carbon isotope alteration during the thermal maturation of non-flowering plant species representative of those found within the geological record.

PubMed

Smith, Andrew C; Kendrick, Christopher P; Moss-Hayes, Vicky L; Vane, Christopher H; Leng, Melanie J

2017-01-15

The carbon isotope (δ 13 C value) composition of fossil plant material is routinely used as a proxy of past climate and environment change. However, palaeoclimate interpretation requires assumptions about the stability of δ 13 C values in plant material during its decomposition and incorporation into sediments. Previous work on modern angiosperm species shows δ 13 C changes of several per mille during simulated decomposition experiments. However, no such tests have been undertaken on non-flowering plants, which are found extensively within the geological record. These plants have distinctly different cellulose-to-lignin ratios from those of their angiosperm counterparts, potentially creating hitherto unknown variations in the original to fossil δ 13 C signatures. To test the extent of δ 13 C change during decomposition we have subjected a number of plants, representing more basal, non-flowering plant lineages (cycads, ferns, horsetails and dawn redwood), to artificial decay using a hydrothermal maturation technique at two temperatures over periods of up to 273 hours. Subsamples were extracted every 12-16 hours and analysed for their δ 13 C and %C values using a Carlo Erba 1500 elemental analyser, and VG TripleTrap and Optima mass spectrometers. The %C values increased for all samples through the maturation process at both temperatures with the largest increases observed within the first 24 hours. Decreases in δ 13 C values were observed for all plants at 300°C and for two of the species at the lower temperature (200°C). The maximum shift in the δ 13 C value related to experimental decomposition was -0.90‰ (horsetail), indicating a preferential loss of 13 C during thermal maturation. The reduction in the δ 13 C value potentially suggests a preferential loss of isotopically heavier cellulose in relation to the isotopically lighter lignin component during maturation. The isotopic offset observed here (<0.9‰) means that palaeoclimatic interpretation

Canada thistle biological control agents on two South Dakota wildlife refuges

USGS Publications Warehouse

Reed, C.C.; Larson, D.L.; Larson, J.L.

2006-01-01

We monitored populations of Canada thistle biocontrol agents Cassida rubiginosa, Ceutorhynchus litura, Larinus (= Hadroplantus) planus, Urophora cardui, Orellia (= Terellia) ruficauda, and Rhinocyllus conicus on Canada thistle (Cirsium arvense) at two national wildlife refuges in South Dakota from 1999 through 2003. C. litura, U. cardui, O. ruficauda, and R. conicus were present on both refuges. Agent populations were low except for C. litura, which was present in up to 90% of stems in some plots. C. litura infestation did not reduce thistle flowering, stem length, or over-winter survival. There was no change in thistle stem numbers over the study period and no difference in stem numbers in areas of high C. litura populations compared to areas of low C. litura populations. Our results suggest that insect biological control agents are inadequate for reduction of Canada thistle in southern South Dakota.

Changes versus homeostasis in alpine and sub-alpine vegetation over three decades in the sub-arctic.

PubMed

Hedenås, Henrik; Carlsson, Bengt A; Emanuelsson, Urban; Headley, Alistair D; Jonasson, Christer; Svensson, Brita M; Callaghan, Terry V

2012-01-01

Plant species distributions are expected to shift and diversity is expected to decline as a result of global climate change, particularly in the Arctic where climate warming is amplified. We have recorded the changes in richness and abundance of vascular plants at Abisko, sub-Arctic Sweden, by re-sampling five studies consisting of seven datasets; one in the mountain birch forest and six at open sites. The oldest study was initiated in 1977-1979 and the latest in 1992. Total species number increased at all sites except for the birch forest site where richness decreased. We found no general pattern in how composition of vascular plants has changed over time. Three species, Calamagrostis lapponica, Carex vaginata and Salix reticulata, showed an overall increase in cover/frequency, while two Equisetum taxa decreased. Instead, we showed that the magnitude and direction of changes in species richness and composition differ among sites.

Investigating the potential of under-utilised plants from the Asteraceae family as a source of natural antimicrobial and antioxidant extracts.

PubMed

Kenny, O; Smyth, T J; Walsh, D; Kelleher, C T; Hewage, C M; Brunton, N P

2014-10-15

Antimicrobial properties of ethanol and water extracts from eight Asteraceae species were investigated against three Gram positive (Staphylococcus aureus, MRSA and Bacillus cereus) and two Gram negative (Escherichia coli and Salmonella typhimurium) bacterial strains. Ethanol extracts from Centaurea scabiosa, Arctium minus, Taraxacum officinale, Centaurea nigra and Cirsium palustre demonstrated antimicrobial activity against strains of S. aureus, MRSA and B. cereus (MIC=187.5-365μg/ml). Ethanol extracts also had higher antioxidant activities and phenolic content demonstrating a link between these compounds and the bioactivity of these extracts. Further investigation into the phenolic content of ethanol extracts using UPLC-MS/MS lead to the identification and quantification of numerous phenolic compounds in all species including; 18 from Cirsium arvense, 16 from Cirsium vulgare, 19 from C. palustre, 15 from C. nigra, 17 from C. scabiosa, 14 from Sonchus asper, 17 from A. minus and 11 from T. officinale. Copyright © 2014 Elsevier Ltd. All rights reserved.

Phytoextraction and phytostabilization potential of plants grown in the vicinity of heavy metal-contaminated soils: a case study at an industrial town site.

PubMed

Lorestani, B; Yousefi, N; Cheraghi, M; Farmany, A

2013-12-01

With the development of urbanization and industrialization, soils have become increasingly polluted by heavy metals. Phytoremediation, an emerging cost-effective, nonintrusive, and aesthetically pleasing technology that uses the remarkable ability of plants to concentrate elements, can be potentially used to remediate metal-contaminated sites. In this research, two processes of phytoremediation (phytoextraction and phytostabilization) were surveyed in some plant species around an industrial town in the Hamedan Province in the central-western part of Iran. To this purpose, shoots and roots of the seven plant species and the associated soil samples were collected and analyzed by measuring Pb, Fe, Mn, Cu, and Zn concentrations using ICP-AES and then calculating the biological absorption coefficient, bioconcentration factor, and translocation factor parameters for each element. The obtained results showed that among the collected plants, Salsola soda is the most effective species for phytoextraction and phytostabilization and Cirsium arvense has the potential for phytostabilization of the measured heavy metals.

Abundance of mixed linkage glucan in mature tissues and secondary cell walls of grasses

PubMed Central

Vega-Sánchez, Miguel E.; Verhertbruggen, Yves; Scheller, Henrik V.; Ronald, Pamela C.

2013-01-01

(1,3; 1,4)-β-D-glucan, also known as mixed linkage glucan (MLG), is a polysaccharide that in flowering plants is unique to the cell walls of grasses and other related members of Poales. MLG is highly abundant in endosperm cell walls, where it is considered a storage carbohydrate. In vegetative tissues, MLG transiently accumulates in the primary cell walls of young, elongating organs. In evolutionary distant species such as Equisetum, MLG accumulates predominantly in old tissues in the stems. Similarly, we have recently shown that rice accumulates a large amount of MLG in mature stems, which prompted us to re-evaluate the hypothesis that MLG is solely related to growth in grass vegetative tissues. Here, we summarize data that confirms the presence of MLG in secondary cell walls and mature tissues in rice and other grasses. Along with these results, we discuss additional evidence indicating a broader role for MLG than previously considered. PMID:23299432

[Pteridophytes that indicate environmental alteration in the temperate forest of San Jerónimo Amanalco, Texcoco, Mexico].

PubMed

Lucía Rodríguez, Romero; Pacheco, Leticia; Zavala Hurtado, José Alejandro

2008-06-01

Pteridophytes that indicate environmental alteration in the San Jer6nimo Amanalco temperate forest, Texcoco, Mexico. The patterns of distribution of 26 pteridophyte species were studied as possible indicators of environmental alteration in the temperate forest of San Jer6nimo Amanalco, Texcoco, State of Mexico. The presence and abundance of the pteridoflora was studied in relation to edaphic, topographic and vegetation variables in 100 sampling locations within an area of 494 hectares. The relationship between these variables was studied using Canonical Correspondence Analysis. Five landscapes were recognized in the study zone according to the degree of deterioration: severe erosion, erosion, mountain with moderate reversible deterioration, mountain with no evident deterioration, and canyon with no evident deterioration. Cheilanthes bonariensis and Pellaea ternifolia are indicators of environmental degradation. The taxa that only grow in landscapes without apparent alteration are Adiantum andicola, Adiantum poiretii, Argyrochosma incana, Asplenium blepharophorum, Dryopteris pseudo filix-mas, Equisetum hyemale and Pteris cretica.

Developmental and environmental effects on assimilate partitioning in Canada thistle

DOE Office of Scientific and Technical Information (OSTI.GOV)

Tworkoski, T.J.

1989-04-01

Canada thistle (Cirsium arvense) plants at three stages of development (rosette, bolt, and flower bud) were grown under spring-simulated or fall-simulated environments. Sucrose export from a single leaf exposed to {sup 14}CO{sub 2} was significantly greater in rosette-plants than bolt- or flower bud-plants during the first two hours after pulse. Twenty-four hours after pulse, total {sup 14}C translocation (dpm) was the same in both environments but the {sup 14}C concentration (dpm/gm) was greater in roots of fall-grown plants. Shoot meristem respiration of fall-grown plants was approximately 50% less than spring-grown plants and was a factor responsible for this trend. Concentrationsmore » of inulin and water-insoluble starch were greater in roots of fall-grown than spring-grown plants and pulsed {sup 14}C accumulated in these fractions. The results suggest that a shift in respiration and metabolism of fall-grown rosette- and bolt-plants leads to increased assimilate movement to the root which may have practical implications for control of this weed.« less

Long-Term Arctic Peatland Dynamics, Vegetation and Climate History of the Pur-Taz Region, Western Siberia

NASA Technical Reports Server (NTRS)

Peteet, Dorothy; Andreev, Andrei; Bardeen, William; Mistretta, Francesca

1998-01-01

Stratigraphic analyses of peat composition, LOI, pollen, spores, macrofossils, charcoal, and AMS ages are used to reconstruct the peatland, vegetation and climatic dynamics in the Pur-Taz region of western Siberia over 5000 years (9300 - 4500 BP). Section stratigraphy shows many changes from shallow lake sediment to different combinations of forested or open sedge, moss, and Equisetum fen and peatland environments. Macrofossil and pollen data indicate that Larix sibirica and Betula pubescens trees were first to arrive, followed by Picea obovata. The dominance of Picea macrofossils 6000-5000 BP in the Pur-Taz peatland along with regional Picea pollen maxima indicate warmer conditions and movement of the spruce treeline northward at this time. The decline of pollen and macrofossils from all of these tree species in uppermost peats suggests a change in the environment less favorable for their growth, perhaps cooler temperatures and/or less moisture. Of major significance is the evidence for old ages of the uppermost peats in this area of Siberia, suggesting a real lack of peat accumulation in recent millennia or recent oxidation of uppermost peat.

The Late Cretaceous Aarya flora of the northern Okhotsk region and phytostratigraphy of the lower part of the Okhotsk-Chukotka volcanogenic belt section

NASA Astrophysics Data System (ADS)

Shczepetov, S. V.; Golovneva, L. B.

2014-07-01

The Zarya flora comes from volcanogenic sedimentary rocks of the Zarya and Parnyi formations that correspond to the basal part of the section of the Okhotsk-Chukotka volcanogenic belt in the Omsukchan district (Magadan oblast, Russia). The revision of its taxonomic composition resulted in identifying approximately 25 species of horsetails, ferns, cycads, ginkgoalens, czekanowskians, conifers, and angiosperms. The Zarya flora is characterized by a combination of the Early Cretaceous relicts ( Hausmannia, Birisia, Sphenobaiera, Phoenicopsis, Nilssonia, Podozamites) and typical Late Cretaceous taxa ( Taxodium, Sequoia, Menispermites, Dalembia, Trochodendroides, Cissites, Terechovia, Platanaceae). Among all the paleofloral assemblages of the Okhotsk-Chukotka volcanogenic belt, the Zarya flora is the most similar to the Turonian-Coniacian Arman flora of the Magadan region, which indicates their synchronism and floral unity. The Chingandzha flora of the Omsukchan area, which comes from the same stratigraphic level as Zarya flora, differs substantially from the latter in its taxonomic composition. It is conceivable that the Chingandzha flora was confined to a large river valley which was connected to coastal lowlands. The plant remains of the Arman flora with many mountain relicts could be buried in sediments of intermountain troughs isolated from coastal lowlands. Araucarites ochotensis sp. nov. is described.

Kalahari Tectonic Landforms and Processes Beyond the Okavango Graben

NASA Astrophysics Data System (ADS)

Eckardt, F. D.; Flügel, T.; Cotterill, W.; Rowe, C. D.; McFarlane, M.

2014-12-01

The southern African Kalahari basin is generally regarded as a stable shield area which is subject to neotectonic modification along western branches of the East African Rift System (EARS) with much focus having been given to the Okavango Graben and its associated geomorphology. In this study, we look for surface expressions that are indicative of recent to on-going tectonic modification beyond the Okavango region. A number of landforms can be highlighted. These include drainage lines in north eastern Namibia which are aligned along a "horsetail" fracture system, interpreted as the response to an apparent incipient rifting extending west of the Okavango Graben and Gumare fault line. The second region of interest, in north eastern Botswana, is known to house a second lesser graben, centred along the Ntwetwe panhandle but with a wider surface manifestation than previously noted. We can demonstrate that the area north of the Makgadikgadi has been modified by "piano key" type fault blocks. And thirdly, structural modifications to linear dune ridges of the southern central Kalahari manifest faulting, shearing and rotation. These observations raise questions about the extent of tectonic processes operating across the southern African interior and attribute additional processes to Kalahari landforms.

Catastrophically buried middle Pennsylvanian sigillaria and calamitean sphenopsids from Indiana, USA: What kind of vegetation was this?

USGS Publications Warehouse

DiMichele, W.A.; Nelson, W.J.; Elrick, S.; Ames, P.R.

2009-01-01

A catastrophically buried stand of calamitean sphenopsids and sigillarian lycopsids is reported from the Middle Pennsylvanian of southwestern Indiana, in the Illinois Basin. The plants were exposed in the highwall of a small surface mine and were rooted in a thin bed of coal (peat), thus representing a flooded and buried swamp surface. Coarse, floodborne silts and sands buried the forest to a depth of 250 linear meters of exposed highwall surface, the vegetation appears to have been a patchwork of calamitean thickets, with stems perhaps as tall as 3-5 m, within which scattered, but much larger, emergent Sigillaria trees grew, possibly reaching heights of 10-15 m. No ground cover was observed, nor were foliage or reproductive organs attributable to the dominant plants found. The growth of this vegetation in a peat-forming swamp indicates conditions of high water availability, likely in a humid, high-rainfall climate. This kind of plant assemblage, however, cannot be characterized as a rain forest, given that it consisted of medium-height thickets of horsetails with scattered, emergent, and polelike, giant lycopsids, thus lacking a closed upper canopy and possibly only partially shading the ground. Copyright ?? 2009, SEPM (Society for Sedimentary Geology).

Comparative proteomic analysis of developing rhizomes of the ancient vascular plant Equisetum hyemale and different monocot species.

PubMed

Salvato, Fernanda; Balbuena, Tiago S; Nelson, William; Rao, R Shyama Prasad; He, Ruifeng; Soderlund, Carol A; Gang, David R; Thelen, Jay J

2015-04-03

The rhizome is responsible for the invasiveness and competitiveness of many plants with great economic and agricultural impact worldwide. Besides its value as an invasive organ, the rhizome plays a role in the establishment and massive growth of forage, providing biomass for biofuel production. Despite these features, little is known about the molecular mechanisms that contribute to rhizome growth, development, and function in plants. In this work, we characterized the proteome of rhizome apical tips and elongation zones from different species using a GeLC-MS/MS (one-dimensional electrophoresis in combination with liquid chromatography coupled online with tandem mass spectrometry) spectral-counting proteomics strategy. Five rhizomatous grasses and an ancient species were compared to study the protein regulation in rhizomes. An average of 2200 rhizome proteins per species were confidently identified and quantified. Rhizome-characteristic proteins showed similar functional distributions across all species analyzed. The over-representation of proteins associated with central roles in cellular, metabolic, and developmental processes indicated accelerated metabolism in growing rhizomes. Moreover, 61 rhizome-characteristic proteins appeared to be regulated similarly among analyzed plants. In addition, 36 showed conserved regulation between rhizome apical tips and elongation zones across species. These proteins were preferentially expressed in rhizome tissues regardless of the species analyzed, making them interesting candidates for more detailed investigative studies about their roles in rhizome development.

ELECTROCHEMICAL FINGERPRINT STUDIES OF SELECTED MEDICINAL PLANTS RICH IN FLAVONOIDS.

PubMed

Konieczyński, Paweł

2015-01-01

The combination of a size-exclusion column (SEC) with electrochemical (voltammetric) detection at a boron-doped diamond electrode (BDDE) was applied for studying the correlations between electroactive Cu and Fe species with phenolic groups of flavonoids. For comparison with electrochemical results, SEC-HPLC-DAD detection was used. The studied plant material comprised of: Betula verrucosa Ehrh., Equisetun arvense L., Polygonum aviculare L., Viola tricolor L., Crataegus oxyacantha L., Sambucus nigra L. and Helichrysum arenarium (L.) Moench. Based upon the results, high negative correlation was found for the chromatographic peak currents at 45 min with the sum of Cu and Fe for the aqueous extracts of Sambucus, Crataegus and Betula species, and for the peak currents at 65 min of the aqueous extracts of Sambucus, Crataegus, Helichrysum and Betula botanical species. This behavior confirms that it is mainly the flavonoids with easily oxidizable phenolic groups which are strongly influenced by the presence of Cu and Fe. Moreover, the electrochemical profiles obtained thanks to the use of HPLC hyphenated with voltammetric detection can be potentially applied for fingerprint studies of the plant materials used in medicine.

Type characters of non-native plant species in Great Lakes national parks (USA)

USGS Publications Warehouse

Bennett, J.P.; Brundu, G.; Brock, J.; Camarda, I.; Child, L.; Wade, M.

2001-01-01

Non-native plant species are increasing in frequency and abundance in many natural areas in the United States. In Midwestern National Parks, as much as one third of the flora may be non-native. It was hypothesized that botanical characters of these species could be used to typify them and improve the methods of predicting invasions. Data on 19 characters of 341 non-native species from the four Great Lakes national lakeshores (Apostle Islands, Indiana Dunes, Pictured Rocks, and Sleeping Bear Dunes) and invasive non-native species for the State of Wisconsin were collected and studied. For many of the species, little data could be found, but for 139 of them, data were collected for at least 80% of the characters. The frequencies of classes of the characters were tabulated and ranked to typify the most common non-native species. This led to a description of a 'type species' just for these four National Parks. Three species of Cirsium, including Canada (C. arvense), marsh (C. palustre) and bull thistle (C. vulgare), matched the type species better than other species. C. vulgare occurs in more National Parks than the other thistles.

Anatomy of Subterranean Organs of Medicinally Used Cardueae and Related Species and its Value for Discrimination

PubMed Central

Fritz, Elisabeth; Saukel, Johannes

2011-01-01

Numerous species of the Asteraceae, the composites, are famous for their use in both traditional and conventional medicine. Reliable anatomical descriptions of these plants and of possible adulterations provide a basis for fast identification and cheap purity controls of respective medicinal drugs by means of light microscopy. Nevertheless, detailed comparative studies on root and rhizome anatomy of valuable as well as related inconsiderable composite plants are largely missing yet. The presented study aims to narrow this gap by performing anatomical analyses of roots and rhizomes of 16 species belonging to the tribe Cardueae, of formerly and currently used drugs as well as their near relatives as potential adulterations (Carlina acaulis L., Carlina vulgaris L., Arctium lappa L., Arctium tomentosum Mill., Carduus defloratus L., Carduus personata (L.) Jacq, Cirsium arvense (L.) Scop., Cirsium vulgare (Savi) Ten., Cirsium erisithales (Jacq.) Scop., Onopordum acanthium L., Silybum marianum (L.) Gaertn., Rhaponticum scariosum Lam., Centaurea jacea L., Centaurea scabiosa L., Centaurea cyanus L., Cnicus benedictus L.). A detailed verbal and graphical survey of the analysed anatomical features is provided. Several characters were finally extracted which allow for discrimination of the examined species and may be effectively used for drug quality controls. PMID:21617780

Phytoremediation potential of indigenous plants from Thai Nguyen province, Vietnam.

PubMed

Anh, Bui Thi Kim; Kim, Dang Dinh; Tua, Tran Van; Kien, Nguyen Trung; Anh, Do Tuan

2011-03-01

This study was focused on determining Arsenic (As), Lead (Pb), Cadmium (Cd) and Zinc (Zn) in 33 indigenous plants and 12 soil in-situ plant samples in Thai Nguyen Province, Vietnam. The results showed that the soils of surveyed mining areas contained 181.2- 6754.3 mg kg(-1) As, 235.5-4337.2 mg kg(-1) Pb, 0.8- 419 mg kg(-1) Cd and 361.8-17565.1 mg kg(-1) Zn depending on the characteristics of each mining site. These values are much higher than those typical for normal soil. The heavy metal uptake into shoots and roots of 33 indigenous plant species was also determined. Two species of the plants investigated, Pteris vittata L. and Pityrogramma calomelanos L. were As hyperaccumulators, containing more than 0.1% heavy metals in their shoots. Eleusine indica L., Cynodon dactylon L., Cyperus rotundus L. and Equisetum ramosissimum (Vauch) accumulate very high Pb (0.15-0.65%) and Zn (0.22-1.56%) concentration in their roots. Additional experiments to clarify the potential of six these plants as good candidates for phytoremediation of heavy metal pollution soil are being carried out in our laboratory.

Physical and Antimicrobial Properties of Starch-PVA Blend Films as Affected by the Incorporation of Natural Antimicrobial Agents

PubMed Central

Cano, Amalia; Cháfer, Maite; Chiralt, Amparo; González-Martínez, Chelo

2015-01-01

In this work, active films based on starch and PVA (S:PVA ratio of 2:1) were developed by incorporating neem (NO) and oregano essential oils (OEO). First, a screening of the antifungal effectiveness of different natural extracts (echinacea, horsetail extract, liquid smoke and neem seed oil) against two fungus (P. expansum and A. niger) was carried out. The effect of NO and OEO incorporation on the films’ physical and antimicrobial properties was analyzed. Only composite films containing OEO exhibited antibacterial and antifungal activity. Antibacterial activity occurred at low OEO concentration (6.7%), while antifungal effect required higher doses of OEO in the films. Incorporation of oils did not notably affect the water sorption capacity and water vapor barrier properties of S-PVA films, but reduced their transparency and gloss, especially at the highest concentrations. The mechanical response of the S-PVA films was also negatively affected by oil incorporation but this was only relevant at the highest oil ratio (22%). S-PVA films with 6.7% of OEO exhibited the best physical properties, without significant differences with respect to the S-PVA matrix, while exhibiting antibacterial activity. Thus, the use of OEO as a natural antimicrobial incorporated into starch-PVA films represents a good and novel alternative in food packaging applications. PMID:28231098

The wildlife research & rescue programme for mammals at Hulu Terengganu Hydroelectric Project (HTHEP), Terengganu, Peninsular Malaysia

NASA Astrophysics Data System (ADS)

Nur-Syuhada, N.; Magintan, D.; Siti-Hajar, A. R.; Aisah, M. S.; Shukor, M. N.

2016-11-01

During the inundation of the Hulu Terengganu Hydroelectric Project in October 2014, a wildlife rescue programme was conducted to rescue animals found trapped within the expanding 61.6 km2 reservoir. A total of 244 mammals from 30 species, representing 12 families were rescued by various methods included baited live trapping, catchpoles, hoop nets and by hand. The order Rodentia recorded the highest amount of rescued individuals at 20.9%, followed by Primate (18.9), Dermoptera (11.1), Carnivora (0.8) and Pholidota (0.4). The genus Rattus recorded the highest individuals rescued (51 individuals) probably due to the rapid clear-cut logging of the forest prior to inundation. Notable mammals of high conservational value rescued included Manis javanicus (Pangolin), Presbytis melalophos siamensis (Mitred Leaf Monkey), Trachypithecus obscurus (Dusky Leaf Monkey), Hylobates lar (White Handed Gibbon), Nycticebus coucang (Slow Loris), Galeopterus variegatus (Sunda Colugo), Callosciurus nigrovittatus (Sunda Black-banded Squirrel), Ratufa spp. (Giant Squirrels), and Sundasciurus hippurus (Horse-tailed Squirrel). Various data and biological samples were collected from the mammals rescued prior to their release at the nearest forest reserves. Rescue operation enabled the inventory and comprehensive data collection of various arboreal and rare mammal species that are hard to capture using the traditional survey method.

Heavy metal and nutrient uptake in plants colonizing post-flotation copper tailings.

PubMed

Kasowska, Dorota; Gediga, Krzysztof; Spiak, Zofia

2018-01-01

Copper ore mining and processing release hazardous post-flotation wastes that are difficult for remediation. The studied tailings were extremely rich in Cu (1800 mg kg -1 ) and contaminated with Co and Mn, and contained very little available forms of P, Fe, and Zn. The plants growing in tailings were distinctly enriched in Cu, Cd, Co, Ni, and Pb, and the concentration of copper achived the critical toxicity level in shoots of Cerastium arvense and Polygonum aviculare. The redundancy analysis demonstrated significant relationship between the concentration of available forms of studied elements in substrate and the chemical composition of plant shoots. Results of the principal component analysis enabled to distinguish groups of plants which significantly differed in the pattern of element accumulation. The grass species Agrostis stolonifera and Calamagrostis epigejos growing in the tailings accumulated significantly lower amounts of Cu, but they also had the lowest levels of P, Fe, and Zn in comparison to dicotyledonous. A. stolonifera occurred to be the most suitable species for phytostabilization of the tailings with regard to its low shoot Cu content and more efficient acquisition of limiting nutrients in relation to C. epigejos. The amendments improving texture, phosphorus fertilization, and the introduction of native leguminous species were recommended for application in the phytoremediation process of the tailings.

Exotic plant colonization and occupancy within riparian areas of the Interior Columbia River and Upper Missouri River basins, USA

USGS Publications Warehouse

Al-Chokhachy, Robert K.; Ray, Andrew M.; Roper, Brett B.; Archer, Eric

2013-01-01

Exotic plant invasions into riparia often result in shifts in vegetative composition, altered stream function, and cascading effects to biota at multiple scales. Characterizing the distribution patterns of exotic plants is an important step in directing targeted research to identify mechanisms of invasion and potential management strategies. In this study, we employed occupancy models to examine the associations of landscape, climate, and disturbance attributes with the colonization and occupancy patterns for spotted knapweed (Centaurea stoebe L.), Canada thistle (Cirsium arvense L., Scop.), and cheatgrass (Bromus tectorum L.) in the riparia of headwater streams (n = 1,091) in the Interior Columbia River and Upper Missouri River Basins. We found relatively low occupancy rates for cheatgrass (0.06, SE = 0.02) and spotted knapweed (0.04, SE = 0.01), but moderate occupancy of Canada thistle (0.28, SE = 0.05); colonization rates were low across all species (<0.01). We found the distributions of spotted knapweed, Canada thistle, and cheatgrass to exhibit significant associations with both ambient climate conditions and anthropogenic and natural disturbances. We attribute the low to moderate occupancy and colonization rates to the relatively remote locations of our sample sites within headwater streams and urge consideration of means to prevent further invasions.

Differential Effect of Irradiance and Nutrient Nitrate on the Relationship of in Vivo and in Vitro Nitrate Reductase Assay in Chlorophyllous Tissues 1

PubMed Central

Jones, Richard Wyn; Sheard, Robert W.

1977-01-01

Growth at increasing continuous irradiance (at high nutrient nitrate) and nutrient nitrate concentrations (at high continuous irradiance) furnished increases in the in vivo and in vitro nitrate reductase activities of corn (Zea mays L.), field peas (Pisum arvense L.), wheat (Triticum aestivum L.), barley (Hordeum vulgare L.), and globe amaranth (Gomphrena globosa L.) leaves and of marrow (Cucurbita pepo L.) cotyledons. Ratios of in vivo to in vitro activity declined exponentially in all species with increasing nitrate reductase levels promoted by nutrient nitrate. The ratios were more nearly independent of nitrate reductase levels generated by adjusting the irradiance; major exceptions were marrow and wheat at low (1.5 klux and less) irradiances and peas throughout the irradiance range, where decreases in the ratio were accompanied by increases in in situ nitrate concentration. The ratio also increased at the highest irradiance (39.2 klux) in wheat and barley, associated with a decline of in vitro nitrate reductase. These differences in response to irradiance and nutrient nitrate indicate that the in vivo assay does not provide a simple measure of nitrate reductase but rather yields a more composite measure of nitrate reduction, possibly related both to nitrate reductase level and to the supply of reductant for in vivo activity. PMID:16659888

Screening and Scoring of Antimicrobial and Biological Activities of Italian Vulnerary Plants against Major Oral Pathogenic Bacteria

PubMed Central

Ferrazzano, Gianmaria F.; Roberto, Lia; Catania, Maria Rosaria; Chiaviello, Angela; De Natale, Antonino; Roscetto, Emanuela; Pinto, Gabriele; Pollio, Antonino; Ingenito, Aniello; Palumbo, Giuseppe

2013-01-01

This study aims to evaluate the activity of Italian vulnerary plants against the most important oral pathogenic bacteria. This estimate was accomplished through a fivefold process: (a) a review of ethnobotanical and microbiological data concerning the Italian vulnerary plants; (b) the development of a scoring system to rank the plants; (c) the comparative assessment of microbiological properties; (d) the assessment of potential cytotoxic effects on keratinocyte-like cells and gingival fibroblasts in culture by XTT cell viability assay; (e) clinical evaluation of the most suitable plant extract as antibacterial agent in a home-made mouthwash. The study assays hexane (H), ethanol (E), and water (W) extracts from 72 plants. The agar diffusion method was used to evaluate the activity against Streptococcus mutans, Streptococcus sobrinus, Lactobacillus casei, and Actinomyces viscosus. Twenty-two plants showed appreciable activity. The extracts showing the strongest antibacterial power were those from Cotinus coggygria Scop., Equisetum hyemale L., Helichrysum litoreum Guss, Juniperus communis L., and Phyllitis scolopendrium (L.) Newman subsp. scolopendrium. The potential cytotoxic effect of these extracts was assessed. On the basis of these observations, a mouth-rinse containing the ethanolic extract of H. litoreum has been tested in vivo, resulting in reduction of the salivary concentration of S. mutans. PMID:24302963

Dynamic of Plant Composition and Regeneration following Windthrow in a Temperate Beech Forest

PubMed Central

Mollaei Darabi, Sakineh; Kooch, Yahya; Hosseini, Seyed Mohsen

2014-01-01

The effects of soil pedoturbation (i.e., pit and mound microtopography, PM) on development of herbaceous plant species and woody species regeneration were examined in a temperate beech forest (Fagus orientalis Lipsky) in northern Iran. We recorded the vegetation in 20 pairs of disturbed and adjacent undisturbed plots and established a chronosequence of PM ages to study the effect of time since microsite formation on cover percent of herbaceous plants and woody regeneration status. According to our findings, Carex acutiformis L., Sambucus ebulus L., Brachypodium pinnatum L., and Cyclamen coum L. are found only in the PM microsites, whereas the Equisetum ramosissimum L. is recorded only under closed canopy. The coverage percent of Rubus caesius L. increased in PM microsites compared to closed canopy intensively. In addition, Albizia julibrissin Durazz. is detected in PM microsite, whereas the Acer cappadocicum B. and Prunus persica L. species were recorded only under closed canopy. We found significant differences in understory species diversity between different ages of PM, and disturbed and adjacent undisturbed plots. Our study supports that the PM complex will create a mosaic of environmental conditions. This environmental heterogeneity could be responsible for the diversity of herbaceous plant species and regeneration of woody species. PMID:27379260

Antimicrobial activity of Northwestern Mexican plants against Helicobacter pylori.

PubMed

Robles-Zepeda, Ramón E; Velázquez-Contreras, Carlos A; Garibay-Escobar, Adriana; Gálvez-Ruiz, Juan C; Ruiz-Bustos, Eduardo

2011-10-01

Helicobacter pylori is the major etiologic agent of such gastric disorders as chronic active gastritis and gastric carcinoma. Over the past few years, the appearance of antibiotic-resistant bacteria has led to the development of better treatments, such as the use of natural products. This study evaluated the anti-H. pylori activity of 17 Mexican plants used mainly in the northwestern part of Mexico (Sonora) for the empirical treatment of gastrointestinal disorders. The anti-H. pylori activity of methanolic extracts of the plants was determined by using the broth microdilution method. The 50% minimum inhibitory concentrations ranged from less than 200 to 400 μg/mL for Castella tortuosa, Amphipterygium adstringens, Ibervillea sonorae, Pscalium decompositum, Krameria erecta, Selaginella lepidophylla, Pimpinella anisum, Marrubium vulgare, Ambrosia confertiflora, and Couterea latiflora and were greater than 800 μg/mL for Byophyllum pinnatum, Tecoma stans linnaeus, Kohleria deppena, Jatropha cuneata, Chenopodium ambrosoides, and Taxodium macronatum. Only Equisetum gigantum showed no activity against H. pylori. This study suggests the important role that these plants may have in the treatment of gastrointestinal disorders caused by H. pylori. The findings set the groundwork for further characterization and elucidation of the active compounds responsible for such activity.

Passive bookshelf faulting driven by gravitational spreading as the cause of the tiger-stripe-fracture formation and development in the South Polar Terrain of Enceladus

NASA Astrophysics Data System (ADS)

Yin, A.; Pappalardo, R. T.

2013-12-01

Detailed photogeologic mapping of the tiger-stripe fractures in the South Polar Terrain (SPT) of Enceladus indicates that these structures are left-slip faults and terminate at hook-shaped fold-thrust zones and/or Y-shaped horsetail splay-fault zones. The semi-square-shaped tectonic domain that hosts the tiger-stripe faults is bounded by right-slip and left-slip faults on the north and south edges and fold-thrust and extensional zones on the western and eastern edges. We explain the above observations by a passive bookshelf-faulting model in which individual tiger-stripe faults are bounded by deformable wall rocks accommodating distributed deformation. Based on topographic data, we suggest that gravitational spreading had caused the SPT to spread unevenly from west to east. This process was accommodated by right-slip and left-slip faulting on the north and south sides and thrusting and extension along the eastern and southern margins of the tiger-stripe tectonic domain. The uneven spreading, expressed by a gradual northward increase in the number of extensional faults and thrusts/folds along the western and eastern margins, was accommodated by distributed right-slip simple shear across the whole tiger-stripe tectonic domain. This mode of deformation in turn resulted in the development of a passive bookshelf-fault system characterized by left-slip faulting on individual tiger-stripe fractures.

Arman' Flora of the magadan region and development of floras in the North Pacific during the Albian-Paleocene

NASA Astrophysics Data System (ADS)

Herman, A. B.

2011-02-01

The Arman' Flora from volcanogenic-sedimentary deposits in the Arman' River basin and Naraula Formation in the Nel'kandzha-Khasyn interfluve includes 82 species of fossil plants comprising liverworts, horsetails, ferns, caytonealeans, cycadaleans, ginkgoaleans, czekanowskialeans, conifers, gymnosperms incertae sedis, and angiosperms. The Arman' Flora appears to be of Turonian-Coniacian age, as it is close to the reliably dated Penzhina and Kaivayam floras from the Northwest Kamchatka and to Tyl'pegyrgynai Flora of the Pekul'nei Ridge. The dating is consistent with isotopic dates (40Ar/39Ar and U-Pb SHRIMP) characterizing the age of plant-bearing sequences. Based on the considered position of the Arman' Flora in the scheme of Cretaceous florogenesis, a leading role in that florogenesis was played by the gradual invasion of floras by new, angiosperm dominated, plant communities. These communities initially populated unstable habitats in the coastal lowlands of Northeast Asia and Alaska, gradually invading with time the Asiatic intracontinental areas. The peculiar combination of Early and Late Cretaceous plants characteristic of the Arman' Flora is strong evidence that Cenophytic plant communities dominated by angiosperms colonized areas still populated in the Late Cretaceous by Mesophytic communities. Absence of Mesophytic and Cenophytic taxa mixing in the Arman' Flora burials suggests a replacement of plant communities as whole rather than of separate plants by more advanced taxa.

Phylogenetic Variation in the Silicon Composition of Plants

PubMed Central

HODSON, M. J.; WHITE, P. J.; MEAD, A.; BROADLEY, M. R.

2005-01-01

• Background and Aims Silicon (Si) in plants provides structural support and improves tolerance to diseases, drought and metal toxicity. Shoot Si concentrations are generally considered to be greater in monocotyledonous than in non-monocot plant species. The phylogenetic variation in the shoot Si concentration of plants reported in the primary literature has been quantified. • Methods Studies were identified which reported Si concentrations in leaf or non-woody shoot tissues from at least two plant species growing in the same environment. Each study contained at least one species in common with another study. • Key Results Meta-analysis of the data revealed that, in general, ferns, gymnosperms and angiosperms accumulated less Si in their shoots than non-vascular plant species and horsetails. Within angiosperms and ferns, differences in shoot Si concentration between species grouped by their higher-level phylogenetic position were identified. Within the angiosperms, species from the commelinoid monocot orders Poales and Arecales accumulated substantially more Si in their shoots than species from other monocot clades. • Conclusions A high shoot Si concentration is not a general feature of monocot species. Information on the phylogenetic variation in shoot Si concentration may provide useful palaeoecological and archaeological information, and inform studies of the biogeochemical cycling of Si and those of the molecular genetics of Si uptake and transport in plants. PMID:16176944

Early vegetation development after grassland restoration by sowing low-diversity seed mixtures in former sunflower and cereal fields.

PubMed

Vida, Enikö; Valkó, Orsolya; Kelemen, A; Török, P; Deák, B; Miglécz, T; Lengyel, Sz; Tóthmérész, B

2010-01-01

We studied the early vegetation dynamics in former croplands (sunflower and cereal fields) sown with a low-diversity seed mixture (composed of 2 native grass species) in Egyek-Pusztakócs, Hortobágy National Park, East-Hungary. The percentage cover of vascular plants was recorded in 4 permanent plots per field on 7 restored fields between 2006 and 2009. Ten aboveground biomass samples per field were also collected in June in each year. We addressed two questions: (i) How do seed sowing and annual mowing affect the species richness, biomass and cover of weeds? (ii) How fast does the cover of sown grasses develop after seed sowing? Weedy species were characteristic in the first year after sowing. In the second and third year their cover and species richness decreased. From the second year onwards the cover of perennial grasses increased. Spontaneously immigrating species characteristic to the reference grasslands were also detected with low cover scores. Short-lived weeds were suppressed as their cover and biomass significantly decreased during the study. The amount of litter and sown grass biomass increased progressively. However, perennial weed cover, especially the cover of Cirsium arvense increased substantially. Our results suggest that grassland vegetation can be recovered by sowing low diversity mixtures followed up by yearly mowing. Suppression of perennial weed cover needs more frequent mowing (multiple times a year) or grazing.

Antifungal and Herbicidal Effects of Fruit Essential Oils of Four Myrtus communis Genotypes.

PubMed

Kordali, Saban; Usanmaz, Ayse; Cakir, Ahmet; Komaki, Amanmohammad; Ercisli, Sezai

2016-01-01

The chemical composition of the essential oils isolated by hydrodistillation from the fruits of four selected Myrtus communis L. genotypes from Turkey was characterized by GC-FID and GC/MS analyses. 1,8-Cineole (29.20-31.40%), linalool (15.67-19.13%), α-terpineol (8.40-18.43%), α-pinene (6.04-20.71%), and geranyl acetate (3.98-7.54%) were found to be the major constituents of the fruit essential oils of all M. communis genotypes investigated. The oils were characterized by high amounts of oxygenated monoterpenes, representing 73.02-83.83% of the total oil compositions. The results of the fungal growth inhibition assays showed that the oils inhibited the growth of 19 phytopathogenic fungi. However, their antifungal activity was generally lower than that of the commercial pesticide benomyl. The herbicidal effects of the oils on the seed germination and seedling growth of Amaranthus retroflexus L., Chenopodium album L., Cirsium arvense (L.) Scop., Lactuca serriola L., and Rumex crispus L. were also determined. The oils completely or partly inhibited the seed germinations and seedling growths of the plants. The findings of the present study suggest that the M. communis essential oils might have potential to be used as natural herbicides as well as fungicides. Copyright © 2016 Verlag Helvetica Chimica Acta AG, Zürich.

Tallgrass prairie restoration: seeding for success

USGS Publications Warehouse

Larson, Diane L.

2013-01-01

Tallgrass prairie is one of the most imperiled ecosystems on Earth. A 2004 estimate indicated that only 2.4 percent of the original northern tallgrass prairie remained in the United States. If tallgrass prairie and the species dependent on it are to survive, management must include restoration of cropland and degraded prairies, in addition to preservation of the few remaining fragments. Despite the importance of restoration and its long history (the first tallgrass prairie restoration was started in 1935 at Curtis Prairie in Wisconsin), few studies have been undertaken with the goal of refining restoration practice. This fact sheet contains the results of one such study, started in 2005, in which we compared three seeding methods (dormant-season broadcast, growing-season broadcast, and growing-season drill) fully crossed with low (10-), medium (20-), and high (34-species) seed mixes replicated 12 times on each of 9 former agricultural fields in Minnesota and Iowa. Plots were 12.2 x 12.2 meters (m) and occupied about 1.6 hectares (ha) (4 acres) of each field. A “successful” restoration is one in which cover and richness of planted species is maximized and cover of exotic and invasive species, especially the noxious weed Canada thistle (Cirsium arvense), is minimized. Details of the planting methods can be located in Larson and others (2011).

Autumn diet of lesser snow geese staging in northeastern Alaska

USGS Publications Warehouse

Brackney, Alan W.; Hupp, J.W.

1993-01-01

The coastal plain of the Arctic National Wildlife Refuge (ANWR) is used by lesser snow geese (Chen caerulescens caerulescens) in autumn for premigratory staging. To better understand the potential impacts of human disturbance on snow geese, we investigated species composition of, and temporal and age-related variation in, their diet during staging. Depending on age and time of collection, between 35.2 and 94.1% of the diet (aggregate percent wet mass, n = 75) consisted of 2 species of plants; underground stems of tall cotton-grass (Eriophorum angustifolium), and aerial shoots of northern scouring rush (Equisetum variegatum). The diet varied between August and September (P = 0.0089), morning and afternoon (P < 0.0001), but not between age classes (P = 0.066). Throughout staging, snow geese consumed more tall cotton-grass during the afternoon than during the morning (P < 0.05). Tall cotton-grass was a larger component of the afternoon diet in September than in August (P < 0.05). In September, snow geese consumed more northern scouring rush in the mornings than in the afternoon (P < 0.05). Nighttime freezing, interspecific differences in nutritional quality, and plant senescence likely constrained the diet of snow geese to a small number of food items. Because alternative foods may not be available, human disturbance should be minimized in areas that provide these forage species.

Cross-reactivity of a new food ingredient, dun pea, with legumes, and risk of anaphylaxis in legume allergic children.

PubMed

Richard, C; Jacquenet, S; Sergeant, P; Moneret-Vautrin, D A

2015-07-01

Legume allergy is the fifth food allergy in Europe. The dun pea (Pisum sativum sativum var. arvense), a pea belonging to the same subspecies as green pea, has been recently introduced as an ingredient in the human food industry. The aims of this study were to evaluate the cross-reactivity between dun pea and other legumes and to search for modification of allergenicity induced by food technologies. A series of 36 patients with legume and/or peanut allergy was studied. They underwent skin tests to peanut and a panel of legumes including dun pea. Specific IgE to dun pea and cross-reactivity to peanut allergens, particularly to Ara h 1, were evaluated by ELISA. Proteins and allergens of different pea extracts were studied by SDS-PAGE and immunoblots. In France and Belgium, 7.7% of severe food anaphylaxis cases were due to legumes. Patients with isolated legume allergy had positive prick tests to dun pea, whereas patients with isolated peanut allergy had negative prick tests. Cross-reactivity between sIgE to peanut and dun pea was observed, and more frequently than expected (96%) peanut-allergic patients with legume sensitization or allergy had sIgE to Ara h 1. Analysis of dun pea allergens suggested that protein epitopes were presented differently in dun pea seeds, isolate and flour. This study identifies, for the first time, a risk of dun pea allergy in legume-allergic patients and in a subset of peanut-allergic patients.

Management of acute Achilles tendon rupture with tendon-bundle technique

PubMed Central

Li, Chun-Guang; Li, Bing

2017-01-01

Objective *These authors contributed equally to this work.To explore tendon-bundle technique for treating Achilles tendon rupture with no defects. Methods Patients with full unilateral Achilles tendon rupture with no defects were included. The Achilles tendon medial edge surgical repair approach was used, revealing horsetail-like rupture bundles. Tendon bundles were anatomically realigned and repaired end-to-end using 5-0 sutures. Patients were followed-up for 1 year, and assessed for differences between the repaired versus healthy limb. Results Out of 24 patients (18 male, 6 female; aged 19–56 years) at 1 year following surgery, mean American Orthopaedic Foot and Ankle Society score was 92.4 ± 5.9; mean differences between the surgically repaired versus contralateral side in dorsiflexion and plantarflexion angle were 3.5 ± 2.3° and 5.6 ± 3.2°, respectively; mean difference in calf circumference between the two sides was 0.9 ± 0.5 cm; and mean increase in Achilles tendon width versus the healthy side was 0.8 ± 0.2 cm. By 1 year post-surgery, there were no significant between-side differences in dorsiflexion and plantarflexion angle, or calf circumference. Conclusions Tendon-bundle surgery resulted in good ankle function restoration and low complication rates. Tendon-bundle surgery may reduce blood supply destruction and maximally preserve Achilles tendon length, and may be effective for treating Achilles tendon rupture with no defects. PMID:28222622

Rapid screening of commercially available herbal products for the inhibition of major human hepatic cytochrome P450 enzymes using the N-in-one cocktail.

PubMed

Sevior, D K; Hokkanen, J; Tolonen, A; Abass, K; Tursas, L; Pelkonen, O; Ahokas, J T

2010-04-01

Self-administration of complementary products concurrently with conventional medication is increasingly common. The potential for cytochrome P450 (CYP) inhibition requires investigation. The N-in-one assay with ten probe substrates for nine CYPs was used with human liver microsomes to investigate ten products. CYP inhibition was measured in a single liquid chromatography-tandem mass spectrometry (LC/MS-MS) analysis. Estimated IC(50)-values were determined for the extracts that produced significant inhibition (less than 100 microg ml(-1)). Inhibition of CYP2C19 by dong quai (IC(50) = 13.7-14.3 microg ml(-1) for the methanolic extract) and CYP2D6 by goldenseal (IC(50) = 6.7 and 6.3 microg ml(-1) for the aqueous and methanolic extracts, respectively), are of particular concern as the potential for adverse interactions is high. The inhibition of CYP2C8 by horsetail (IC(50) = 93 microg ml(-1) for the aqueous extract) requires further investigation, as the potential for concurrent use with products that require CYP2C8 for metabolism is significant. CYP3A4 inhibition varied depending on the probe reaction being monitored. The earlier reported findings of inhibition by black cohosh, goldenseal and gotu kola were confirmed. The present work has shown that the N-in-one cocktail is a rapid and reliable method that can be used as an initial screen to help prioritize products that require more detailed investigations and it can also be applied to monitor product variability.

Bayesian network classifiers for categorizing cortical GABAergic interneurons.

PubMed

Mihaljević, Bojan; Benavides-Piccione, Ruth; Bielza, Concha; DeFelipe, Javier; Larrañaga, Pedro

2015-04-01

An accepted classification of GABAergic interneurons of the cerebral cortex is a major goal in neuroscience. A recently proposed taxonomy based on patterns of axonal arborization promises to be a pragmatic method for achieving this goal. It involves characterizing interneurons according to five axonal arborization features, called F1-F5, and classifying them into a set of predefined types, most of which are established in the literature. Unfortunately, there is little consensus among expert neuroscientists regarding the morphological definitions of some of the proposed types. While supervised classifiers were able to categorize the interneurons in accordance with experts' assignments, their accuracy was limited because they were trained with disputed labels. Thus, here we automatically classify interneuron subsets with different label reliability thresholds (i.e., such that every cell's label is backed by at least a certain (threshold) number of experts). We quantify the cells with parameters of axonal and dendritic morphologies and, in order to predict the type, also with axonal features F1-F4 provided by the experts. Using Bayesian network classifiers, we accurately characterize and classify the interneurons and identify useful predictor variables. In particular, we discriminate among reliable examples of common basket, horse-tail, large basket, and Martinotti cells with up to 89.52% accuracy, and single out the number of branches at 180 μm from the soma, the convex hull 2D area, and the axonal features F1-F4 as especially useful predictors for distinguishing among these types. These results open up new possibilities for an objective and pragmatic classification of interneurons.

Structural framework of a major intracontinental orogenic termination zone: The easternmost Tien Shan, China

USGS Publications Warehouse

Cunningham, D.; Owen, L.A.; Snee, L.W.; Li, Ji

2003-01-01

The Barkol Tagh and Karlik Tagh ranges of the easternmost Tien Shan are a natural laboratory for studying the fault architecture of an active termination zone of a major intracontinental mountain range. Barkol and Karlik Tagh and lesser ranges to the north are bounded by active thrust faults that locally deform Quaternary sediments. Major thrusts in Karlik Tagh connect along strike to the east with the left-lateral Gobi-Tien Shan Fault System in SW Mongolia. From a Mongolian perspective. Karlik Tagh represents a large restraining bend for this regional strike-slip fault system, and the entire system of thrusts and strike-slip faults in the Karlik Tagh region defines a horsetail splay fault geometry. Regionally, there appears to be a kinematic transition from thrust-dominated deformation in the central Tien Shan to left-lateral transpressional deformation in the easternmost Tien Shan. This transition correlates with a general eastward decrease in mountain belt width and average elevation and a change in the angular relationship between the NNE-directed maximum horizontal stress in the region and the pre-existing basement structural grain, which is northwesterly in the central Tien Shan (orthogonal to SHmax) but more east-west in the eastern Tien Shan (acute angular relationship with SHmax . Ar-Ar ages indicate that major range-bounding thrusts in Barkol and Karlik Tagh are latest Permian-Triassic ductile thrust zones that underwent brittle reactivation in the Late Cenozoic. It is estimated that the modern mountain ranges of the extreme easternmost Tien Shan could have been constructed by only 10-15 km of Late Cenozoic horizontal shortening.

The evolution of root hairs and rhizoids.

PubMed

Jones, Victor A S; Dolan, Liam

2012-07-01

Almost all land plants develop tip-growing filamentous cells at the interface between the plant and substrate (the soil). Root hairs form on the surface of roots of sporophytes (the multicellular diploid phase of the life cycle) in vascular plants. Rhizoids develop on the free-living gametophytes of vascular and non-vascular plants and on both gametophytes and sporophytes of the extinct rhyniophytes. Extant lycophytes (clubmosses and quillworts) and monilophytes (ferns and horsetails) develop both free-living gametophytes and free-living sporophytes. These gametophytes and sporophytes grow in close contact with the soil and develop rhizoids and root hairs, respectively. Here we review the development and function of rhizoids and root hairs in extant groups of land plants. Root hairs are important for the uptake of nutrients with limited mobility in the soil such as phosphate. Rhizoids have a variety of functions including water transport and adhesion to surfaces in some mosses and liverworts. A similar gene regulatory network controls the development of rhizoids in moss gametophytes and root hairs on the roots of vascular plant sporophytes. It is likely that this gene regulatory network first operated in the gametophyte of the earliest land plants. We propose that later it functioned in sporophytes as the diploid phase evolved a free-living habit and developed an interface with the soil. This transference of gene function from gametophyte to sporophyte could provide a mechanism that, at least in part, explains the increase in morphological diversity of sporophytes that occurred during the radiation of land plants in the Devonian Period.

The evolution of root hairs and rhizoids

PubMed Central

Jones, Victor A.S.; Dolan, Liam

2012-01-01

Background Almost all land plants develop tip-growing filamentous cells at the interface between the plant and substrate (the soil). Root hairs form on the surface of roots of sporophytes (the multicellular diploid phase of the life cycle) in vascular plants. Rhizoids develop on the free-living gametophytes of vascular and non-vascular plants and on both gametophytes and sporophytes of the extinct rhyniophytes. Extant lycophytes (clubmosses and quillworts) and monilophytes (ferns and horsetails) develop both free-living gametophytes and free-living sporophytes. These gametophytes and sporophytes grow in close contact with the soil and develop rhizoids and root hairs, respectively. Scope Here we review the development and function of rhizoids and root hairs in extant groups of land plants. Root hairs are important for the uptake of nutrients with limited mobility in the soil such as phosphate. Rhizoids have a variety of functions including water transport and adhesion to surfaces in some mosses and liverworts. Conclusions A similar gene regulatory network controls the development of rhizoids in moss gametophytes and root hairs on the roots of vascular plant sporophytes. It is likely that this gene regulatory network first operated in the gametophyte of the earliest land plants. We propose that later it functioned in sporophytes as the diploid phase evolved a free-living habit and developed an interface with the soil. This transference of gene function from gametophyte to sporophyte could provide a mechanism that, at least in part, explains the increase in morphological diversity of sporophytes that occurred during the radiation of land plants in the Devonian Period. PMID:22730024

Stomatal Blue Light Response Is Present in Early Vascular Plants.

PubMed

Doi, Michio; Kitagawa, Yuki; Shimazaki, Ken-ichiro

2015-10-01

Light is a major environmental factor required for stomatal opening. Blue light (BL) induces stomatal opening in higher plants as a signal under the photosynthetic active radiation. The stomatal BL response is not present in the fern species of Polypodiopsida. The acquisition of a stomatal BL response might provide competitive advantages in both the uptake of CO2 and prevention of water loss with the ability to rapidly open and close stomata. We surveyed the stomatal opening in response to strong red light (RL) and weak BL under the RL with gas exchange technique in a diverse selection of plant species from euphyllophytes, including spermatophytes and monilophytes, to lycophytes. We showed the presence of RL-induced stomatal opening in most of these species and found that the BL responses operated in all euphyllophytes except Polypodiopsida. We also confirmed that the stomatal opening in lycophytes, the early vascular plants, is driven by plasma membrane proton-translocating adenosine triphosphatase and K(+) accumulation in guard cells, which is the same mechanism operating in stomata of angiosperms. These results suggest that the early vascular plants respond to both RL and BL and actively regulate stomatal aperture. We also found three plant species that absolutely require BL for both stomatal opening and photosynthetic CO2 fixation, including a gymnosperm, C. revoluta, and the ferns Equisetum hyemale and Psilotum nudum. © 2015 American Society of Plant Biologists. All Rights Reserved.

Multigene phylogeny of land plants with special reference to bryophytes and the earliest land plants.

PubMed

Nickrent, D L; Parkinson, C L; Palmer, J D; Duff, R J

2000-12-01

A widely held view of land plant relationships places liverworts as the first branch of the land plant tree, whereas some molecular analyses and a cladistic study of morphological characters indicate that hornworts are the earliest land plants. To help resolve this conflict, we used parsimony and likelihood methods to analyze a 6, 095-character data set composed of four genes (chloroplast rbcL and small-subunit rDNA from all three plant genomes) from all major land plant lineages. In all analyses, significant support was obtained for the monophyly of vascular plants, lycophytes, ferns (including PSILOTUM: and EQUISETUM:), seed plants, and angiosperms. Relationships among the three bryophyte lineages were unresolved in parsimony analyses in which all positions were included and weighted equally. However, in parsimony and likelihood analyses in which rbcL third-codon-position transitions were either excluded or downweighted (due to apparent saturation), hornworts were placed as sister to all other land plants, with mosses and liverworts jointly forming the second deepest lineage. Decay analyses and Kishino-Hasegawa tests of the third-position-excluded data set showed significant support for the hornwort-basal topology over several alternative topologies, including the commonly cited liverwort-basal topology. Among the four genes used, mitochondrial small-subunit rDNA showed the lowest homoplasy and alone recovered essentially the same topology as the multigene tree. This molecular phylogeny presents new opportunities to assess paleontological evidence and morphological innovations that occurred during the early evolution of terrestrial plants.

Analysis of landslide overgrowing rates at Vaskiny Dachi key site, Central Yamal, Russia

NASA Astrophysics Data System (ADS)

Khomutov, A.

2009-04-01

Equiesetum arvense ssp. boreale were presented, pioneer moss species (Bryum sp., Ceratodon purpureus appropriate for disturbed habitats appeared. In the "frontal zone" transformed initial communities were observed and sedge communities with Carex glareosa were developing (Rebristaya et al. 1995). In 2005 landslide shear surface was characterized by abundance of pioneer grass and chamomile-grass with herb communities on rather dry portions (Deschampsia borealis, Puccinellia sibirica, Draba hirta, Tanacetum bipinnatum, Senecio congestus), and sedge (Carex glaerosa, Carex bigelowii ssp. arctisibirica) or cottongrass (Eriophorum angustifolium, Eriophorim vaginatum) meadows in depressions, but edges of gentle troughs were overgrowing poorly. On the landslide body, initial moss cover did not recover, on separate blocks crustose lichens developed. However, everywhere in more stable herb-shrub communities with Salix polaris typical moss cover formed. In "frontal zone" sedge bogs appeared. Some activation of overgrowing was noted in 2007-2008 in connection with favorable weather conditions with warm summers in preceding 2005-2006 and relatively high summer precipitation, but shear surfaces of majority of landslides got overgrown by 30-40 % because of poorly developed organic horizon and high erosion liability of these surfaces, as well as shear surfaces of small landslides on steep slopes. Different are landslides on gentle southern slopes. Their shear surfaces got overgrown by herb, cotton grass and sedge communities by 90% while communities on landslide bodies are similar to those on surrounding undisturbed slopes. Specific are landslides with actively developing thermoerosion on shear surface. Overgrowing and thermoerosion are developing simultaneously at such landslides. At one of such landslides depth of thermoerosion gully reached to 2 m in 2008. At the same time shear surface around the gully got overgrown by pioneer grass and chamomile-grass communities with equisetum and

Using publicly available data to quantify plant–pollinator interactions and evaluate conservation seeding mixes in the Northern Great Plains

USGS Publications Warehouse

Otto, Clint R.; O'Dell, Samuel; Bryant, R. B.; Euliss, Ned H. Jr.; Bush, Rachel; Smart, Matthew

2017-01-01

Concern over declining pollinators has led to multiple conservation initiatives for improving forage for bees in agroecosystems. Using data available through the Pollinator Library (npwrc.usgs.gov/pollinator/), we summarize plant–pollinator interaction data collected from 2012–2015 on lands managed by the U.S. Fish and Wildlife Service and private lands enrolled in U.S. Department of Agriculture conservation programs in eastern North Dakota (ND). Furthermore, we demonstrate how plant–pollinator interaction data from the Pollinator Library and seed cost information can be used to evaluate hypothetical seeding mixes for pollinator habitat enhancements. We summarize records of 314 wild bee and 849 honey bee (Apis mellifera L.) interactions detected on 63 different plant species. The wild bee observations consisted of 46 species, 15 genera, and 5 families. Over 54% of all wild bee observations were represented by three genera―Bombus, Lassioglossum, and Melissodes. The most commonly visited forbs by wild bees were Monarda fistulosa, Sonchus arvensis, and Zizia aurea. The most commonly visited forbs by A. mellifera were Cirsium arvense, Melilotus officinalis, and Medicago sativa. Among all interactions, 13% of A. mellifera and 77% of wild bee observations were made on plants native to ND. Our seed mix evaluation shows that mixes may often need to be tailored to meet the unique needs of wild bees and managed honey bees in agricultural landscapes. Our evaluation also demonstrates the importance of incorporating both biologic and economic information when attempting to design cost-effective seeding mixes for supporting pollinators in a critically important part of the United States.

Syntheses and herbicidal activity of new triazolopyrimidine-2-sulfonamides as acetohydroxyacid synthase inhibitor.

PubMed

Chen, Chao-Nan; Chen, Qiong; Liu, Yu-Chao; Zhu, Xiao-Lei; Niu, Cong-Wei; Xi, Zhen; Yang, Guang-Fu

2010-07-15

The triazolopyrimidine-2-sulfonanilide, discovered from preparing bioisosteres of the sulfonylurea herbicides, is an important class of acetohydroxyacid synthase (AHAS, EC 4.1.3.18) inhibitors. At least over ten triazolopyrimidine sulfonanilides have been commercialized as herbicides for the control of broadleaf weeds and grass with cereal crop selectivity. Herein, a series of triazolopyrimidine-2-sulfonanilides were designed and synthesized with the aim of discovery of new herbicides with higher activity. The assay results of the inhibition activity of the synthesized compounds against Arabidopsis thatiana AHAS indicated that some compounds showed a little higher activity against flumetsulam (FS), the first commercial triazolopyrimidine-2-sulfonanilide-type herbicide. The ki values of two promising compounds 3d and 8h are respectively, 1.61 and 1.29 microM, while that of FS is 1.85 microM. Computational simulation results indicated the ester group of compound 3d formed hydrogen bonds with the surrounding residues Arg'198 and Ser653, which accounts for its 11.5-folds higher AHAS inhibition activity than Y6610. Further green house assay showed that compound 3d has comparable herbicidal activity as FS. Even at the concentration of 37.5g.ai/ha, 3d showed excellent herbicidal activity against Galium aparine, Cerastium arvense, Chenopodium album, Amaranthus retroflexus, and Rmumex acetasa, moderate herbicidal activity against Polygonum humifusum, Cyperus iria, and Eclipta prostrate. The combination of in vitro and in vivo assay indicated that 3d could be regarded as a new potential acetohydroxyacid synthase-inhibiting herbicide candidate for further study. Copyright (c) 2010 Elsevier Ltd. All rights reserved.

Using prairie restoration to curtail invasion of Canada thistle: the importance of limiting similarity and seed mix richness

USGS Publications Warehouse

Larson, Diane L.; Bright, J.B.; Drobney, Pauline; Larson, Jennifer L.; Palaia, Nicholas; Rabie, Paul A.; Vacek, Sara; Wells, Douglas

2013-01-01

Theory has predicted, and many experimental studies have confirmed, that resident plant species richness is inversely related to invisibility. Likewise, potential invaders that are functionally similar to resident plant species are less likely to invade than are those from different functional groups. Neither of these ideas has been tested in the context of an operational prairie restoration. Here, we tested the hypotheses that within tallgrass prairie restorations (1) as seed mix species richness increased, cover of the invasive perennial forb, Canada thistle (Cirsium arvense) would decline; and (2) guilds (both planted and arising from the seedbank) most similar to Canada thistle would have a larger negative effect on it than less similar guilds. Each hypothesis was tested on six former agricultural fields restored to tallgrass prairie in 2005; all were within the tallgrass prairie biome in Minnesota, USA. A mixed-model with repeated measures (years) in a randomized block (fields) design indicated that seed mix richness had no effect on cover of Canada thistle. Structural equation models assessing effects of cover of each planted and non-planted guild on cover of Canada thistle in 2006, 2007, and 2010 revealed that planted Asteraceae never had a negative effect on Canada thistle. In contrast, planted cool-season grasses and non-Asteraceae forbs, and many non-planted guilds had negative effects on Canada thistle cover. We conclude that early, robust establishment of native species, regardless of guild, is of greater importance in resistance to Canada thistle than is similarity of guilds in new prairie restorations.

Phenolic acids as bioindicators of fly ash deposit revegetation

DOE Office of Scientific and Technical Information (OSTI.GOV)

L. Djurdjevic; M. Mitrovic; P. Pavlovic

The floristic composition, the abundance, and the cover of pioneer plant species of spontaneously formed plant communities and the content of total phenolics and phenolic acids, as humus constituents, of an ash deposit after 7 years of recultivation were studied. The restoration of both the soil and the vegetation on the ash deposits of the 'Nikola Tesla-A' thermoelectric power plant in Obrenovac (Serbia) is an extremely slow process. Unfavorable physical and chemical characteristics, the toxicity of fly ash, and extreme microclimatic conditions prevented the development of compact plant cover. The abundance and cover of plants increased from the central partmore » of the deposit towards its edges. Festuca rubra L., Crepis setosa Hall., Erigeron canadensis L., Cirsium arvense (L.) Scop., Calamagrostis epigeios (L.) Roth., and Tamarix gallica L. were the most abundant species, thus giving the highest cover. Humus generated during the decomposition process of plant remains represents a completely new product absent in the ash as the starting material. The amount of total phenolics and phenolic acids in fly ash increased from the center of the deposit towards its edges in correlation with the increase in plant abundance and cover. The presence of phenolic acids indicates the ongoing process of humus formation in the ash, in which the most abundant pioneer plants of spontaneously formed plant communities play the main role. Phenolic compounds can serve as reliable bioindicators in an assessment of the success of the recultivation process of thermoelectric power plants' ash deposits.« less

Persistence of native and exotic plants 10 years after prairie reconstruction

USGS Publications Warehouse

Larson, Diane L.; Bright, J. B.; Drobney, Pauline; Larson, Jennifer L.; Vacek, Sara

2017-01-01

Prairie reconstructions are a critical component of preservation of the imperiled tallgrass prairie ecosystem in the Midwestern United States. Sustainability of this endeavor depends on establishment of persistent cover of planted native species and resistance to noxious weeds. The goal of this study was to understand the influence of early reconstruction practices on long-term outcomes. Twelve replicates of three planting methods (dormant-season broadcast, growing-season broadcast, and growing-season drill) and three seed mix richness levels (10, 20, or 34 species), fully crossed in a completely randomized design were planted in 2005 on nine former agricultural fields located in Iowa and Minnesota. Cover by species was estimated in 2005–2007, 2010, and 2015. In 2015, cover of planted species, native nonplanted species, and exotic species were similar to those recorded in 2010. Cover of the noxious weed Cirsium arvense had also declined by an average of 49% without herbicide from a peak in 2007 to low stable levels from 2010 to 2015. Richness of planted forbs, on the other hand, were still increasing in high-richness broadcast treatments (e.g. 17–59% increase 2010–1015 in Minnesota). Two results in 2015 are reasons for concern: cover of planted species is only slightly over 50% in both Minnesota and Iowa, though with forbs still increasing, this may improve; and the cool-season exotic grasses Poa pratensis and Bromus inermis are increasing at both Minnesota and Iowa sites. Control of these invasive grasses will be necessary, but care will be needed to avoid negative impacts of control methods on natives.

An ecophysiological study of plants growing on the fly ash deposits from the "Nikola Tesla-A" thermal power station in Serbia.

PubMed

Pavlović, Pavle; Mitrović, Miroslava; Djurdjević, Lola

2004-05-01

This ecophysiological research on the ash deposits from the "Nikola Tesla-A" thermal power station in Serbia covered 10 plant species (Tamarix gallica, Populus alba, Spiraea van-hauttei, Ambrosia artemisifolia, Amorpha fruticosa, Eupatorium cannabinum, Crepis setosa, Epilobium collinum, Verbascum phlomoides, and Cirsium arvense). This paper presents the results of a water regime analysis, photosynthetic efficiency and trace elements (B, Cu, Mn, Zn, Pb, and Cd) content in vegetative plant parts. Water regime parameters indicate an overall stability in plant-water relations. During the period of summer drought, photosynthetic efficiency (Fv/Fm) was low, ranging from 0.429 to 0.620 for all the species that were analyzed. An analysis of the tissue trace elements content showed a lower trace metal concentration in the plants than in the ash, indicating that heavy metals undergo major concentration during the combustion process and some are not readily taken up by plants. The Zn and Pb concentrations in all of the examined species were normal whereas Cu and Mn concentrations were in the deficiency range. Boron concentrations in plant tissues were high, with some species even showing levels of more than 100 microg/g (Populus sp., Ambrosia sp., Amorpha sp., and Cirsium sp.). The presence of Cd was not detected. In general, it can be concluded from the results of this research that biological recultivation should take into account the existing ecological, vegetation, and floristic potential of an immediate environment that is abundant in life forms and ecological types of plant species that can overgrow the ash deposit relatively quickly. Selected species should be adapted to toxic B concentrations with moderate demands in terms of mineral elements (Cu and Mn).

Seismotectonics of the Armutlu peninsula (Marmara Sea, NW Turkey) from geological field observation and regional moment tensor inversion

NASA Astrophysics Data System (ADS)

Kinscher, J.; Krüger, F.; Woith, H.; Lühr, B. G.; Hintersberger, E.; Irmak, T. S.; Baris, S.

2013-11-01

The Armutlu peninsula, located in the eastern Marmara Sea, coincides with the western end of the rupture of the 17 August 1999, İzmit MW 7.6 earthquake which is the penultimate event of an apparently westward migrating series of strong and disastrous earthquakes along the NAFZ during the past century. We present new seismotectonic data of this key region in order to evaluate previous seismotectonic models and their implications for seismic hazard assessment in the eastern Marmara Sea. Long term kinematics were investigated by performing paleo strain reconstruction from geological field investigations by morphotectonic and kinematic analysis of exposed brittle faults. Short term kinematics were investigated by inverting for the moment tensor of 13 small to moderate recent earthquakes using surface wave amplitude spectra. Our results confirm previous models interpreting the eastern Marmara Sea Region as an active transtensional pull-apart environment associated with significant NNE-SSW extension and vertical displacement. At the northern peninsula, long term deformation pattern did not change significantly since Pliocene times contradicting regional tectonic models which postulate a newly formed single dextral strike slip fault in the Marmara Sea Region. This area is interpreted as a horsetail splay fault structure associated with a major normal fault segment that we call the Waterfall Fault. Apart from the Waterfall Fault, the stress strain relation appears complex associated with a complicated internal fault geometry, strain partitioning, and reactivation of pre-existing plane structures. At the southern peninsula, recent deformation indicates active pull-apart tectonics constituted by NE-SW trending dextral strike slip faults. Earthquakes generated by stress release along large rupture zones seem to be less probable at the northern, but more probable at the southern peninsula. Additionally, regional seismicity appears predominantly driven by plate boundary

Antibacterial, antioxidant and anti-proliferative properties and zinc content of five south Portugal herbs.

PubMed

Nunes, Ricardo; Pasko, Pawel; Tyszka-Czochara, Malgorzata; Szewczyk, Agnieszka; Szlosarczyk, Marek; Carvalho, Isabel S

2017-12-01

Crataegus monogyna L. (Rosaceae) (CM), Equisetum telmateia L. (Equisataceae) (ET), Geranium purpureum Vil. (Geraniaceae) (GP), Mentha suaveolens Ehrh. (Lamiaceae) (MS), and Lavandula stoechas L. spp. luisieri (Lamiaceae) (LS) are all medicinal. To evaluate the antioxidant, antiproliferative and antimicrobial activities of plant extracts and quantify individual phenolics and zinc. Aerial part extracts were prepared with water (W), ethanol (E) and an 80% mixture (80EW). Antioxidant activity was measured with TAA, FRAP and RP methods. Phenolics were quantified with a HPLC. Zinc was quantified using voltammetry. Antibacterial activity (after 48 h) was tested using Enterococcus faecalis, Bacillus cereus, Escherichia coli, Staphylococcus aureus, Pseudomonas aeruginosa and Listeria monocytogenes. Antiproliferative activity (after 24 h) was tested using HEP G2 cells and fibroblasts. Solvents influenced results; the best were E and 80EW. GP had the highest antioxidant activity (TAA and FRAP of 536.90 mg AAE/g dw and 783.48 mg TE/g dw, respectively). CM had the highest zinc concentration (37.21 mg/kg) and phenolic variety, with neochlorogenic acid as the most abundant (92.91 mg/100 g dw). LS was rich in rosmarinic acid (301.71 mg/100 g dw). GP and LS inhibited the most microorganisms: B. cereus, E. coli and S. aureus. GP also inhibited E. faecalis. CM had the lowest MIC: 5830 μg/mL. The antibacterial activity is explained by the phenolics present. LS and CM showed the most significant anti-proliferative activity, which is explained by their zinc content. The most promising plants for further studies are CM, LS and GP.

Cell wall polysaccharides from fern leaves: evidence for a mannan-rich Type III cell wall in Adiantum raddianum.

PubMed

Silva, Giovanna B; Ionashiro, Mari; Carrara, Thalita B; Crivellari, Augusto C; Tiné, Marco A S; Prado, Jefferson; Carpita, Nicholas C; Buckeridge, Marcos S

2011-12-01

Primary cell walls from plants are composites of cellulose tethered by cross-linking glycans and embedded in a matrix of pectins. Cell wall composition varies between plant species, reflecting in some instances the evolutionary distance between them. In this work the monosaccharide compositions of isolated primary cell walls of nine fern species and one lycophyte were characterized and compared with those from Equisetum and an angiosperm dicot. The relatively high abundance of mannose in these plants suggests that mannans may constitute the major cross-linking glycan in the primary walls of pteridophytes and lycophytes. Pectin-related polysaccharides contained mostly rhamnose and uronic acids, indicating the presence of rhamnogalacturonan I highly substituted with galactose and arabinose. Structural and fine-structural analyses of the hemicellulose fraction of leaves of Adiantum raddianum confirmed this hypothesis. Linkage analysis showed that the mannan contains mostly 4-Man with very little 4,6-Man, indicating a low percentage of branching with galactose. Treatment of the mannan-rich fractions with endo-β-mannanase produced characteristic mannan oligosaccharides. Minor amounts of xyloglucan and xylans were also detected. These data and those of others suggest that all vascular plants contain xyloglucans, arabinoxylans, and (gluco)mannans, but in different proportions that define cell wall types. Whereas xyloglucan and pectin-rich walls define Type I walls of dicots and many monocots, arabinoxylans and lower proportion of pectin define the Type II walls of commelinoid monocots. The mannan-rich primary walls with low pectins of many ferns and a lycopod indicate a fundamentally different wall type among land plants, the Type III wall. Copyright © 2011 Elsevier Ltd. All rights reserved.

Selection and characterization of glyphosate tolerance in birdsfoot trefoil (Lotus corniculatus)

DOE Office of Scientific and Technical Information (OSTI.GOV)

Boerboom, C.M.

1989-01-01

If birdsfoot trefoil (Lotus corniculatus L.) was tolerant to glyphosate (N-(phosphonomethyl)glycine), Canada thistle (Cirsium arvense (L.) Scop.) and other dicot weeds could be selectively controlled in certified seed production fields. Glyphosate tolerance in birdsfoot trefoil was identified in plants from the cultivar Leo, plants regenerated from tolerant callus, and selfed progeny of plants regenerated from callus. Plants from the three sources were evaluated in field studies for tolerance to glyphosate at rates up to 1.6 kg ae/ha. Plants of Leo selected for tolerance exhibited a twofold range in the rate required to reduce shoot weight 50% (I{sub 50}s from 0.6more » to 1.2 kg/ha glyphosate). Plants regenerated from tolerant callus had tolerance up to 66% greater than plants regenerated from unselected callus. Transgressive segregation for glyphosate tolerance was observed in the selfed progeny of two regenerated plants that both had I{sub 50}s of 0.7 kg/ha glyphosate. The selfed progeny ranged from highly tolerant (I{sub 50} of 1.5 kg/ha) to susceptible (I{sub 50} of 0.5 kg/ha). Spray retention, {sup 14}C-glyphosate absorption and translocation did not account for the differential tolerance of nine plants that were evaluated from the three sources. The specific activity of 5-enolpyruvylshikimate 3-phosphate (EPSP) synthase ranged from 1.3 to 3.5 nmol/min{sm bullet}mg among the nine plants and was positively correlated with glyphosate tolerance. Leo birdsfoot trefoil was found to have significant variation in glyphosate tolerance which made it possible to initiate a recurrent selection program to select for glyphosate tolerance in birdsfoot trefoil. Two cycles of selection for glyphosate tolerance were practiced in three birdsfoot trefoil populations, Leo, Norcen, and MU-81.« less

Using Publicly Available Data to Quantify Plant-Pollinator Interactions and Evaluate Conservation Seeding Mixes in the Northern Great Plains.

PubMed

Otto, C R V; O'Dell, S; Bryant, R B; Euliss, N H; Bush, R M; Smart, M D

2017-06-01

Concern over declining pollinators has led to multiple conservation initiatives for improving forage for bees in agroecosystems. Using data available through the Pollinator Library (npwrc.usgs.gov/pollinator/), we summarize plant-pollinator interaction data collected from 2012-2015 on lands managed by the U.S. Fish and Wildlife Service and private lands enrolled in U.S. Department of Agriculture conservation programs in eastern North Dakota (ND). Furthermore, we demonstrate how plant-pollinator interaction data from the Pollinator Library and seed cost information can be used to evaluate hypothetical seeding mixes for pollinator habitat enhancements. We summarize records of 314 wild bee and 849 honey bee (Apis mellifera L.) interactions detected on 63 different plant species. The wild bee observations consisted of 46 species, 15 genera, and 5 families. Over 54% of all wild bee observations were represented by three genera-Bombus, Lassioglossum, and Melissodes. The most commonly visited forbs by wild bees were Monarda fistulosa, Sonchus arvensis, and Zizia aurea. The most commonly visited forbs by A. mellifera were Cirsium arvense, Melilotus officinalis, and Medicago sativa. Among all interactions, 13% of A. mellifera and 77% of wild bee observations were made on plants native to ND. Our seed mix evaluation shows that mixes may often need to be tailored to meet the unique needs of wild bees and managed honey bees in agricultural landscapes. Our evaluation also demonstrates the importance of incorporating both biologic and economic information when attempting to design cost-effective seeding mixes for supporting pollinators in a critically important part of the United States. Published by Oxford University Press on behalf of Entomological Society of America 2017. This work is written by US Government employees and is in the public domain in the US.

Phenolic acids as bioindicators of fly ash deposit revegetation.

PubMed

Djurdjević, L; Mitrović, M; Pavlović, P; Gajić, G; Kostić, O

2006-05-01

The floristic composition, the abundance, and the cover of pioneer plant species of spontaneously formed plant communities and the content of total phenolics and phenolic acids, as humus constituents, of an ash deposit after 7 years of recultivation were studied. The restoration of both the soil and the vegetation on the ash deposits of the "Nikola Tesla-A" thermoelectric power plant in Obrenovac (Serbia) is an extremely slow process. Unfavorable physical and chemical characteristics, the toxicity of fly ash, and extreme microclimatic conditions prevented the development of compact plant cover. The abundance and cover of plants increased from the central part of the deposit towards its edges (ranging from 1-80%). Festuca rubra L., Crepis setosa Hall., Erigeron canadensis L., Cirsium arvense (L.) Scop., Calamagrostis epigeios (L.) Roth., and Tamarix gallica L. were the most abundant species, thus giving the highest cover. Humus generated during the decomposition process of plant remains represents a completely new product absent in the ash as the starting material. The amount of total phenolics and phenolic acids (38.07-185.16 microg/g of total phenolics and 4.12-27.28 microg/g of phenolic acids) in fly ash increased from the center of the deposit towards its edges in correlation with the increase in plant abundance and cover. Ash samples contained high amounts of ferulic, vanillic, and p-coumaric acid, while the content of both p-hydroxybenzoic and syringic acid was relatively low. The presence of phenolic acids indicates the ongoing process of humus formation in the ash, in which the most abundant pioneer plants of spontaneously formed plant communities play the main role. Phenolic compounds can serve as reliable bioindicators in an assessment of the success of the recultivation process of thermoelectric power plants' ash deposits.

Community response to a sustainable restoration plan for a superfund site.

PubMed

Sidhu, Virinder; Sarkar, Dibyendu; Datta, Rupali; Solomon, Barry

2018-06-01

Large-scale copper (Cu) mining activities in Michigan's Upper Peninsula produced millions of metric tons of mining wastes also known as stamp sands. The stamp sands containing high concentrations of Cu were disposed of into several lakes connected to the Lake Superior. Eventually, as aquatic organisms in these lakes started to exhibit toxicity symptoms, the stamp sands were dredged and discarded on the lake shores. Consequently, these areas turned into degraded, marginal lands and were collectively classified as a Torch Lake Superfund site by the US EPA. Due to the lack of vegetative cover, the Cu-rich stamp sands eroded into the lakes, affecting the aquatic life. To alleviate this issue, a sustainable restoration plan (SRP) was developed and tested in a greenhouse environment prior to field implementation. Cold-tolerant oilseed crops, camelina (Camelina sativa) and field pennycress (Thlaspi arvense), were grown on compost-fertilized stamp sands, which reduced soil erosion by acting as a vegetative cap. Oilseed plants produced normal yield, demonstrating their potential utilization as biofuel feedstock. Prior to implementing the SRP in field-scale in the Torch Lake Superfund site, a public opinion survey of the local community was conducted to understand the views of residents. Door-to-door survey was performed in July-August 2015, which yielded a response rate of 68.1%. Results showed that residents were generally concerned with stamp sand erosion into the Torch Lake and were overwhelmingly supportive of the SRP, which would not only provide environmental benefits but could boost the local economy via biofuel production. To gauge the general environmental awareness of the respondents, the survey included questions on climate change. Most of the respondents acknowledged that climate change is real and anthropogenically mediated. Having college education and a relatively high annual household income showed a positive and significant correlation with climate change

Historical and projected climate (1901–2050) and hydrologic response of karst aquifers, and species vulnerability in south-central Texas and western South Dakota

USGS Publications Warehouse

Stamm, John F.; Poteet, Mary F.; Symstad, Amy J.; Musgrove, MaryLynn; Long, Andrew J.; Mahler, Barbara J.; Norton, Parker A.

2015-12-18

Flora and fauna that rely on springflow from Edwards and Madison aquifer sites were assessed for vulnerability to projected climate change on the basis of the Climate Change Vulnerability Index (CCVI). The CCVI is determined by the exposure of a species to climate, the sensitivity of the species, and the ability of the species to cope with climate change. Sixteen species associated with springs and groundwater were assessed in the Balcones Escarpment region. The Barton Springs salamander (Eurycea sosorum) was scored as highly vulnerable with moderate confidence. Nine species—three salamanders, a fountain darter (Etheostoma fonticola), three insects, and two amphipods—were scored as moderately vulnerable. The remaining six species—four vascular plants, the Barton cavesnail (Stygopyrgus bartonensis), and a cave shrimp—were scored as not vulnerable/presumed stable (not vulnerable and evidence does not support change in abundance or range of the species). Vulnerability of eight species associated with streams that receive springflow from the Madison aquifer in the Black Hills was assessed. Of these, the American dipper (Cinclus mexicanus) and the lesser yellow lady’s slipper (Cypripedium parviflorum) were scored as moderately vulernable with high confidence. The dwarf scouringrush (Equisetum scirpoides) and autumn willow (Salix serissima) were also scored as moderately vulnerable with moderate to low confidence, respectively. Other species were assessed as not vulnerable/presumed stable or not vulnerable/increase likely (not vulnerable and evidence supporting an increase in abundance or range of the species). Lower vulnerability scores for the Black Hills species in comparison to the Balcones Escarpment species reflect lower endemicity, higher projected springflow than in the historical period, and high thermal tolerance of many of the species for the Black Hills. Importantly, climate change vulnerability scores differed substantially for Edwards aquifer

Polyphenolic Profile and Targeted Bioactivity of Methanolic Extracts from Mediterranean Ethnomedicinal Plants on Human Cancer Cell Lines.

PubMed

Pollio, Antonino; Zarrelli, Armando; Romanucci, Valeria; Di Mauro, Alfredo; Barra, Federica; Pinto, Gabriele; Crescenzi, Elvira; Roscetto, Emanuela; Palumbo, Giuseppe

2016-03-23

The methanol extracts of the aerial part of four ethnomedicinal plants of Mediterranean region, two non-seed vascular plants, Equisetum hyemale L. and Phyllitis scolopendrium (L.) Newman, and two Spermatophyta, Juniperus communis L. (J. communis) and Cotinus coggygria Scop. (C. coggygria), were screened against four human cells lines (A549, MCF7, TK6 and U937). Only the extracts of J. communis and C. coggygria showed marked cytotoxic effects, affecting both cell morphology and growth. A dose-dependent effect of these two extracts was also observed on the cell cycle distribution. Incubation of all the cell lines in a medium containing J. communis extract determined a remarkable accumulation of cells in the G2/M phase, whereas the C. coggygria extract induced a significant increase in the percentage of G1 cells. The novelty of our findings stands on the observation that the two extracts, consistently, elicited coherent effects on the cell cycle in four cell lines, independently from their phenotype, as two of them have epithelial origin and grow adherent and two are lymphoblastoid and grow in suspension. Even the expression profiles of several proteins regulating cell cycle progression and cell death were affected by both extracts. LC-MS investigation of methanol extract of C. coggygria led to the identification of twelve flavonoids (compounds 1-11, 19) and eight polyphenols derivatives (12-18, 20), while in J. communis extract, eight flavonoids (21-28), a α-ionone glycoside (29) and a lignin (30) were found. Although many of these compounds have interesting individual biological activities, their natural blends seem to exert specific effects on the proliferation of cell lines either growing adherent or in suspension, suggesting potential use in fighting cancer.

Toxic Elements in Different Medicinal Plants and the Impact on Human Health.

PubMed

Brima, Eid I

2017-10-11

Local medicinal plants from Madina, Saudi Arabia, are used to cure various diseases. However, some can cause adverse health effects. Five different medicinal plants were collected in the city of Madina: mahareeb ( Cymbopogon ), sheeh ( Artemisia ), harjal ( Cynanchum argel delile ), nabipoot ( Equisetum ), and kafmariam ( Vitex agnus-castus ). In total, four toxic elements including Al, Pb, As, and Cd were analyzed using inductively coupled plasma mass spectrometry (ICP-MS). The range of recoveries fell between 86.1 and 90.6% for all measured elements. Al levels were the highest of any of the studied elements in all plant samples, with Cymbopogon showing the highest levels. The range of concentrations of Al was 156-1609 mg/kg. Cd appeared at the lowest levels in all plants samples, with Vitex agnus-castus containing this element at the highest levels. Cd concentrations were in the range of 0.01-0.10 mg/kg. A washing process lowered the toxic elements in all plants; average % recoveries were Al (47.32%), As (59.1%), Cd (62.03%), and Pb (32.40%). The calculated human health risk assessment in one dose for toxic elements in all plants was as follows: Al (1.33 × 10 -3 -5.57 × 10 -2 mg/kg.bw), Pb (0-8.86 × 10 -5 mg/kg.bw), As (3.43 × 10 -7 -1.33 × 10 -5 mg/kg.bw), and Cd (0-3.14 × 10 -6 mg/kg.bw). Medicinal plants are a source of exposure to toxic elements. However, none of the plants in this study exceeded the daily guideline set by the WHO for any element based on conventional use by the local population. We may cautiously conclude that these medicinal plants pose no risk to users based on conventional use.

Ethnopharmacological survey among migrants living in the Southeast Atlantic Forest of Diadema, São Paulo, Brazil

PubMed Central

2010-01-01

Background Understanding how people of diverse cultural backgrounds have traditionally used plants and animals as medicinal substances during displacements is one of the most important objectives of ethnopharmacological studies. An ethnopharmacological survey conducted among migrants living in the Southeast Atlantic Forest remnants (Diadema, São Paulo, Brazil) is presented herein. Methods Ethnographical methods were used to select and interview the migrants, and botanical and zoological techniques were employed to collect the indicated resources. Results We interviewed five migrants who described knowledge on 12 animals and 85 plants. Only 78 plants were present in Diadema, they belong to 37 taxonomic families; 68 were used exclusively for medicinal purposes, whereas 10 were reported to be toxic and/or presented some restriction of use. These taxa were grouped into 12 therapeutic categories (e.g., gastrointestinal disturbances, inflammatory processes or respiratory problems) based on the 41 individual complaints cited by the migrants. While the twelve animal species were used by the migrants to treat nine complaints; these were divided into six categories, the largest of which related to respiratory problems. None of the animal species and only 57 of the 78 plant species analysed in the present study were previously reported in the pharmacological literature; the popular knowledge concurred with academic findings for 30 of the plants. The seven plants [Impatiens hawkeri W. Bull., Artemisia canphorata Vill., Equisetum arvensis L., Senna pendula (Humb. & Bonpl. ex Willd.) H.S. Irwin & Barneby, Zea mays L., Fevillea passiflora Vell. and Croton fuscescens Spreng)] and the two animals (Atta sexdens and Periplaneta americana) that showed maintenance of use among migrants during their displacement in Brazilian territory, have not been studied by pharmacologists yet. Conclusions Thus, they should be highlighted and focused in further pharmacology and phytochemical studies

Toxic Elements in Different Medicinal Plants and the Impact on Human Health

PubMed Central

Brima, Eid I.

2017-01-01

Local medicinal plants from Madina, Saudi Arabia, are used to cure various diseases. However, some can cause adverse health effects. Five different medicinal plants were collected in the city of Madina: mahareeb (Cymbopogon), sheeh (Artemisia), harjal (Cynanchum argel delile), nabipoot (Equisetum), and kafmariam (Vitex agnus-castus). In total, four toxic elements including Al, Pb, As, and Cd were analyzed using inductively coupled plasma mass spectrometry (ICP-MS). The range of recoveries fell between 86.1 and 90.6% for all measured elements. Al levels were the highest of any of the studied elements in all plant samples, with Cymbopogon showing the highest levels. The range of concentrations of Al was 156–1609 mg/kg. Cd appeared at the lowest levels in all plants samples, with Vitex agnus-castus containing this element at the highest levels. Cd concentrations were in the range of 0.01–0.10 mg/kg. A washing process lowered the toxic elements in all plants; average % recoveries were Al (47.32%), As (59.1%), Cd (62.03%), and Pb (32.40%). The calculated human health risk assessment in one dose for toxic elements in all plants was as follows: Al (1.33 × 10−3–5.57 × 10−2 mg/kg.bw), Pb (0–8.86 × 10−5 mg/kg.bw), As (3.43 × 10−7–1.33 × 10−5 mg/kg.bw), and Cd (0–3.14 × 10−6 mg/kg.bw). Medicinal plants are a source of exposure to toxic elements. However, none of the plants in this study exceeded the daily guideline set by the WHO for any element based on conventional use by the local population. We may cautiously conclude that these medicinal plants pose no risk to users based on conventional use. PMID:29019913

Nature and composition of interbedded marine basaltic pumice in the ˜52-50 Ma Vastan lignite sequence, western India: Implication for Early Eocene MORB volcanism offshore Arabian Sea

NASA Astrophysics Data System (ADS)

Sensarma, Sarajit; Singh, Hukam; Rana, R. S.; Paul, Debajyoti; Sahni, Ashok

2017-03-01

The recognition of pyroclasts preserved in sedimentary environments far from its source is uncommon. We here describe occurrences of several centimetres-thick discontinuous basaltic pumice lenses occurring within the Early Eocene Vastan lignite mine sedimentary sequence, western India at two different levels - one at ˜5 m and the other at 10 m above a biostratigraphically constrained 52 Ma old marker level postdating the Deccan Volcanism. These sections have received global attention as they record mammalian and plant radiations. We infer the repetitive occurrence of pumice have been sourced from a ˜52-50 Ma MORB related to sea-floor spreading in the western Arabian Sea, most plausibly along the Carlsberg Ridge. Pyroclasts have skeletal plagioclase with horsetail morphologies ± pyroxene ± Fe-Ti oxide euhedral crystals, and typically comprise of circular polymodal (radii ≤10 to ≥30 μm), non-coalescing microvesicles (>40-60%). The pumice have undergone considerable syngenetic alteration during oceanic transport and post-burial digenesis, and are a composite mixture of Fe-Mn-rich clay and hydrated altered basaltic glass (palagonite). The Fe-Mn-rich clay is extremely low in SiO 2, Al 2 O 3, TiO 2, MgO, alkalies and REE, but very high in Fe 2 O 3, MnO, P, Ba, Sr contents, and palagonitization involved significant loss of SiO 2, Al 2 O 3, MgO and variable gain in Fe 2 O 3, TiO 2, Ni, V, Zr, Zn and REE. Bubble initiation to growth in the ascending basaltic magma (liquidus ˜1200-1250 ∘C) may have occured in ˜3 hr. Short-distance transport, non-connected vesicles, deposition in inner shelf to more confined lagoonal condition in the Early Eocene and quick burial helped preservation of the pumice in Vastan. Early Eocene Arabian Sea volcanism thus might have been an additional source to marginal sediments along the passive margin of western India.

Late Palaeozoic to Triassic evolution of the Turan and Scythian platforms: The pre-history of the Palaeo-Tethyan closure

NASA Astrophysics Data System (ADS)

Natal'in, Boris A.; Şengör, A. M. Celâl

2005-08-01

A number of en échelon-arranged, southwest-facing arc fragments of Palaeozoic to Jurassic ages, sandwiched between two fairly straight east-northeast trending boundaries, constitute the basement of the Scythian and the Turan platforms located between the Laurasian and Tethyside units. They have until now largely escaped detection owing to extensive Jurassic and younger cover and the inaccessibility of the subsurface data to the international geological community. These units are separated from one another by linear/gently-curved faults of great length and steep dip. Those that are exposed show evidence of strike-slip motion. The arc units originally constituted parts of a single "Silk Road Arc" located somewhere south of the present-day central Asia for much of the Palaeozoic, although by the late Carboniferous they had been united into a continental margin arc south of the Tarim basin and equivalent units to the west and east. They were stacked into their present places in northern Afghanistan, Turkmenistan, Caucasus and the northern Black Sea by large-scale, right-lateral strike-slip coastwise transport along arc-slicing and arc-shaving strike-slip faults in the Triassic and medial Jurassic simultaneously with the subductive elimination of Palaeo-Tethys. This gigantic dextral zone ("the Silk Road transpression") was a trans-Eurasian structure and was active simultaneously with another, similar system, the Gornostaev keirogen and greatly distorted Eurasia. The late Palaeozoic to Jurassic internal deformation of the Dniepr-Donets aulacogen was also a part of the dextral strain in southern Europe. When the emplacement of the Scythian and Turan units was completed, the elimination of Palaeo-Tethys had also ended and Neo-Tethyan arcs were constructed atop their ruins, mostly across their southern parts. The western end of the great dextral zone that emplaced the Turan and Scythian units horsetails just east of north Dobrudja and a small component goes along the

Geosphere-biosphere circulation of chemical elements in soil and plant systems from a 100 km transect from southern central Norway.

PubMed

Reimann, Clemens; Fabian, Karl; Flem, Belinda; Andersson, Malin; Filzmoser, Peter; Englmaier, Peter

2018-05-17

Geochemical element separation is studied in 14 different sample media collected at 41 sites along an approximately 100-km long transect north of Oslo. At each site, soil C and O horizons and 12 plant materials (birch/spruce/cowberry/blueberry leaves/needles and twigs, horsetail, braken fern, pine bark and terrestrial moss) were sampled. The observed concentrations of 29 elements (K, Ca, P, Mg, Mn, S, Fe, Zn, Na, B, Cu, Mo, Co, Al, Ba, Rb, Sr, Ti, Ni, Pb, Cs, Cd, Ce, Sn, La, Tl, Y, Hg, Ag) were used to investigate soil-plant relations, and to evaluate the element differentiation between different plants, or between foliage and twigs of the same plant. In relation to the soil C horizon, the O horizon is strongly enriched (O/C ratio > 5) in Ag, Hg, Cd, Sn, S and Pb. Other elements (B, K, Ca, P, S, Mn) show higher concentrations in the plants than in the substrate represented by the C horizon, and often even higher concentrations than in the soil O horizon. Elements like B, K, Ca, S, Mg, P, Ba, and Cu are well tuned to certain concentration levels in most of the plants. This is demonstrated by their lower interquartile variability in the plants than in the soil. Cross-plots of element concentration, variance, and ratios, supported by linear discrimination analysis, establish that different plants are marked by their individual element composition, which is separable from, and largely independent of the natural substrate variability across the Gjøvik transect. Element allocation to foliage or twigs of the same plants can also be separated and thus dominantly depend on metabolism, physiology, and structure linked to biological functions, and only to a lesser degree on the substrate and environmental background. The results underline the importance of understanding the biological mechanisms of plant-soil interaction in order to correctly quantify anthropogenic impact on soil and plant geochemistry. Copyright © 2018 Elsevier B.V. All rights reserved.

Spatial Distribution of b-value of the Copahue volcano during 2012-2014 eruptive period: Relationship between magmatic and hydrothermal system

NASA Astrophysics Data System (ADS)

Lazo, Jonathan; Basualto, Daniel; Bengoa, Cintia; Cardona, Carlos; Franco, Luis; Gil-Cruz, Fernando; Hernández, Erasmo; Lara, Luis; Lundgren, Paul; Medina, Roxana; Morales, Sergio; Peña, Paola; Quijada, Jonathan; Samsonov, Sergey; San Martin, Juan; Valderrama, Oscar

2015-04-01

Temporal and spatial variations of b-value have been interpreted as regional stress changes on active tectonic zones or magma ascent and/or hydrothermal fluids mobilization that could affect to active volcanic arc. Increasing of fluids pressure, medium heterogeneities or temperature changes would be the cause of these variations. The Copahue volcano is a shield strato-volcano that has been edified on the western margin of the Caviahue Caldera, located in the international border between Chile and Argentina, which contain an important geothermic field and is located at a horse-tail structure of the Liquiñe-Ofqui Fault Zone. The pre-fracture nature of its basement, as well as an extensive geothermic field, would be producing very complex conditions to fluids movement that could be exploring to use the 'b' value of the recorded seismicity between 2012 and 2014. Based in the database of VT seismic events, we used 2.073 events to calculate the b-value to obtain the 2D and 3D distribution maps. Results showed two anomalous zones: the first one located 9 Km to NE of the active crater, 3-6 Km depth, with high b-values (>1.2) that is associated with a very high production rate of small earthquakes that could suggest a brittle zone, located in the active geothermal field. The second zone, showed a low b-values (~ 0.7), located to east of the volcano edifice at <3 Km depth, associated to a zone where were generated larger magnitude events, suggesting a zone with more stress accumulation that well correlated with the deformation center detected by InSAR measurements. This zone could be interpreted as the magmatic source that interacts with the shallow hydrothermal system. Thus, in a very complex setting as a volcano sitting on top of a geothermal system, the b-value offers a tool to understand the distribution of the seismic sources and hence a physical constrain for the coupled magmatic/hydrothermal system.

Granivory of invasive, naturalized, and native plants in communities differentially susceptible to invasion.

PubMed

Connolly, B M; Pearson, D E; Mack, R N

2014-07-01

Seed predation is an important biotic filter that can influence abundance and spatial distributions of native species through differential effects on recruitment. This filter may also influence the relative abundance of nonnative plants within habitats and the communities' susceptibility to invasion via differences in granivore identity, abundance, and food preference. We evaluated the effect of postdispersal seed predators on the establishment of invasive, naturalized, and native species within and between adjacent forest and steppe communities of eastern Washington, USA that differ in severity of plant invasion. Seed removal from trays placed within guild-specific exclosures revealed that small mammals were the dominant seed predators in both forest and steppe. Seeds of invasive species (Bromus tectorum, Cirsium arvense) were removed significantly less than the seeds of native (Pseudoroegneria spicata, Balsamorhiza sagittata) and naturalized (Secale cereale, Centaurea cyanus) species. Seed predation limited seedling emergence and establishment in both communities in the absence of competition in a pattern reflecting natural plant abundance: S. cereale was most suppressed, B. tectorum was least suppressed, and P. spicata was suppressed at an intermediate level. Furthermore, seed predation reduced the residual seed bank for all species. Seed mass correlated with seed removal rates in the forest and their subsequent effects on plant recruitment; larger seeds were removed at higher rates than smaller seeds. Our vegetation surveys indicate higher densities and canopy cover of nonnative species occur in the steppe compared with the forest understory, suggesting the steppe may be more susceptible to invasion. Seed predation alone, however, did not result in significant differences in establishment for any species between these communities, presumably due to similar total small-mammal abundance between communities. Consequently, preferential seed predation by small

Strategies for preventing invasive plant outbreaks after prescribed fire in ponderosa pine forest

USGS Publications Warehouse

Symstad, Amy J.; Newton, Wesley E.; Swanson, Daniel J.

2014-01-01

Land managers use prescribed fire to return a vital process to fire-adapted ecosystems, restore forest structure from a state altered by long-term fire suppression, and reduce wildfire intensity. However, fire often produces favorable conditions for invasive plant species, particularly if it is intense enough to reveal bare mineral soil and open previously closed canopies. Understanding the environmental or fire characteristics that explain post-fire invasive plant abundance would aid managers in efficiently finding and quickly responding to fire-caused infestations. To that end, we used an information-theoretic model-selection approach to assess the relative importance of abiotic environmental characteristics (topoedaphic position, distance from roads), pre-and post-fire biotic environmental characteristics (forest structure, understory vegetation, fuel load), and prescribed fire severity (measured in four different ways) in explaining invasive plant cover in ponderosa pine forest in South Dakota’s Black Hills. Environmental characteristics (distance from roads and post-fire forest structure) alone provided the most explanation of variation (26%) in post-fire cover of Verbascum thapsus (common mullein), but a combination of surface fire severity and environmental characteristics (pre-fire forest structure and distance from roads) explained 36–39% of the variation in post-fire cover of Cirsium arvense (Canada thistle) and all invasives together. For four species and all invasives together, their pre-fire cover explained more variation (26–82%) in post-fire cover than environmental and fire characteristics did, suggesting one strategy for reducing post-fire invasive outbreaks may be to find and control invasives before the fire. Finding them may be difficult, however, since pre-fire environmental characteristics explained only 20% of variation in pre-fire total invasive cover, and less for individual species. Thus, moderating fire intensity or targeting areas

Favorable fragmentation: river reservoirs can impede downstream expansion of riparian weeds.

PubMed

Rood, Stewart B; Braatne, Jeffrey H; Goater, Lori A

2010-09-01

River valleys represent biologically rich corridors characterized by natural disturbances that create moist and barren sites suitable for colonization by native riparian plants, and also by weeds. Dams and reservoirs interrupt the longitudinal corridors and we hypothesized that this could restrict downstream weed expansion. To consider this "reservoir impediment" hypothesis we assessed the occurrences and abundances of weeds along a 315-km river valley corridor that commenced with an unimpounded reach of the Snake River and extended through Brownlee, Oxbow, and Hells Canyon reservoirs and dams, and downstream along the Snake River. Sampling along 206 belt transects with 3610 quadrats revealed 16 noxious and four invasive weed species. Ten weeds were upland plants, with Canada thistle (Cirsium arvense) restricted to the upstream reaches, where field morning glory (Convolvulus arvensis) was also more common. In contrast, St. John's wort (Hypericum perforatum) was more abundant below the dams, and medusahead wildrye (Taeniatherum caput-medusae) occurred primarily along the reservoirs. All seven riparian species were abundant in the upstream zones but sparse or absent below the dams. This pattern was observed for the facultative riparian species, poison hemlock (Conium maculatum) and perennial pepperweed (Lepidium latifolium), the obligate riparian, yellow nut sedge (Cyperus esculentus), the invasive perennial, reed canary grass (Phalaris arundinacea), and three invasive riparian trees, Russian olive (Elaeagnus angustifolia), false indigo (Amorpha fruticosa), and tamarisk (Tamarix spp.). The hydrophyte purple loosestrife (Lythrum salicaria) was also restricted to the upstream zone. These longitudinal patterns indicate that the reservoirs have impeded the downstream expansion of riparian weeds, and this may especially result from the repetitive draw-down and refilling of Brownlee Reservoir that imposes a lethal combination of drought and flood stress. The dams and

Changes in the Vegetation Cover in a Constructed Wetland at Argonne National Laboratory, Illinois

DOE Office of Scientific and Technical Information (OSTI.GOV)

Bergman, C.L.; LaGory, K.

2004-01-01

Wetlands are valuable resources that are disappearing at an alarming rate. Land development has resulted in the destruction of wetlands for approximately 200 years. To combat this destruction, the federal government passed legislation that requires no net loss of wetlands. The United States Army Corps of Engineers (USACE) is responsible for regulating wetland disturbances. In 1991, the USACE determined that the construction of the Advanced Photon Source at Argonne National Laboratory would damage three wetlands that had a total area of one acre. Argonne was required to create a wetland of equal acreage to replace the damaged wetlands. For themore » first five years after this wetland was created (1992-1996), the frequency of plant species, relative cover, and water depth was closely monitored. The wetland was not monitored again until 2002. In 2003, the vegetation cover data were again collected with a similar methodology to previous years. The plant species were sampled using quadrats at randomly selected locations along transects throughout the wetland. The fifty sampling locations were monitored once in June and percent cover of each of the plant species was determined for each plot. Furthermore, the extent of standing water in the wetland was measured. In 2003, 21 species of plants were found and identified. Eleven species dominated the wetland, among which were reed canary grass (Phalaris arundinacea), crown vetch (Coronilla varia), and Canada thistle (Cirsium arvense). These species are all non-native, invasive species. In the previous year, 30 species were found in the same wetland. The common species varied from the 2002 study but still had these non-native species in common. Reed canary grass and Canada thistle both increased by more than 100% from 2002. Unfortunately, the non-native species may be contributing to the loss of biodiversity in the wetland. In the future, control measures should be taken to ensure the establishment of more desired native

Fire Blight Control: The Struggle Goes On. A Comparison of Different Fire Blight Control Methods in Switzerland with Respect to Biosafety, Efficacy and Durability.

PubMed

Gusberti, Michele; Klemm, Urs; Meier, Matthias S; Maurhofer, Monika; Hunger-Glaser, Isabel

2015-09-11

Fire blight (FB), caused by Erwinia amylovora, is one of the most important pome fruit pathogens worldwide. To control this devastating disease, various chemical and biological treatments are commonly applied in Switzerland, but they fail to keep the infection at an acceptable level in years of heavy disease pressure. The Swiss authorities therefore currently allow the controlled use of the antibiotic streptomycin against FB in years that are predicted to have heavy infection periods, but only one treatment per season is permitted. Another strategy for controlling Erwinia is to breed resistant/tolerant apple cultivars. One way of accelerating the breeding process is to obtain resistant cultivars by inserting one or several major resistance genes, using genetic engineering. To date, no study summarizing the impact of different FB control measures on the environment and on human health has been performed. This study consequently aims to compare different disease-control measures (biological control, chemical control, control by antibiotics and by resistant/tolerant apple cultivars obtained through conventional or molecular breeding) applied against E. amylovora, considering different protection goals (protection of human health, environment, agricultural diversity and economic interest), with special emphasis on biosafety aspects. Information on each FB control measure in relation to the specified protection goal was assessed by literature searches and by interviews with experts. Based on our results it can be concluded that the FB control measures currently applied in Switzerland are safe for consumers, workers and the environment. However, there are several gaps in our knowledge of the human health and environmental impacts analyzed: data are missing (1) on long term studies on the efficacy of most of the analyzed FB control measures; (2) on the safety of operators handling streptomycin; (3) on residue analyses of Equisetum plant extract, the copper and aluminum

Fire Blight Control: The Struggle Goes On. A Comparison of Different Fire Blight Control Methods in Switzerland with Respect to Biosafety, Efficacy and Durability

PubMed Central

Gusberti, Michele; Klemm, Urs; Meier, Matthias S.; Maurhofer, Monika; Hunger-Glaser, Isabel

2015-01-01

Fire blight (FB), caused by Erwinia amylovora, is one of the most important pome fruit pathogens worldwide. To control this devastating disease, various chemical and biological treatments are commonly applied in Switzerland, but they fail to keep the infection at an acceptable level in years of heavy disease pressure. The Swiss authorities therefore currently allow the controlled use of the antibiotic streptomycin against FB in years that are predicted to have heavy infection periods, but only one treatment per season is permitted. Another strategy for controlling Erwinia is to breed resistant/tolerant apple cultivars. One way of accelerating the breeding process is to obtain resistant cultivars by inserting one or several major resistance genes, using genetic engineering. To date, no study summarizing the impact of different FB control measures on the environment and on human health has been performed. This study consequently aims to compare different disease-control measures (biological control, chemical control, control by antibiotics and by resistant/tolerant apple cultivars obtained through conventional or molecular breeding) applied against E. amylovora, considering different protection goals (protection of human health, environment, agricultural diversity and economic interest), with special emphasis on biosafety aspects. Information on each FB control measure in relation to the specified protection goal was assessed by literature searches and by interviews with experts. Based on our results it can be concluded that the FB control measures currently applied in Switzerland are safe for consumers, workers and the environment. However, there are several gaps in our knowledge of the human health and environmental impacts analyzed: data are missing (1) on long term studies on the efficacy of most of the analyzed FB control measures; (2) on the safety of operators handling streptomycin; (3) on residue analyses of Equisetum plant extract, the copper and aluminum

DOE Office of Scientific and Technical Information (OSTI.GOV)

FOGWELL, T.W.

During the biological survey and inventory of the Hanford Site conducted in the mid-1990s (1995 and 1996), preliminary surveys of the riparian vegetation were conducted along the Hanford Reach. These preliminary data were reported to The Nature Conservancy (TNC), but were not included in any TNC reports to DOE or stakeholders. During the latter part of FY2001, PNNL contracted with SEE Botanical, the parties that performed the original surveys in the mid 1990s, to complete the data summaries and mapping associated with the earlier survey data. Those data sets were delivered to PNNL and the riparian mapping by vegetation typemore » for the Hanford Reach is being digitized during the first quarter of FY2002. These mapping efforts provide the information necessary to create subsequent spatial data layers to describe the riparian zone according to plant functional types (trees, shrubs, grasses, sedges, forbs). Quantification of the riparian zone by vegetation types is important to a number of DOE'S priority issues including modeling contaminant transport and uptake in the near-riverine environment and the determination of ecological risk. This work included the identification of vegetative zones along the Reach by changes in dominant plant species covering the shoreline from just to the north of the 300 Area to China Bar near Vernita. Dominant and indicator species included Agropyron dasytachyudA. smithii, Apocynum cannabinum, Aristida longiseta, Artemisia campestris ssp. borealis var scouleriana, Artemisa dracunculus, Artemisia lindleyana, Artemisia tridentata, Bromus tectorum, Chrysothamnus nauseosus, Coreopsis atkinsoniana. Eleocharis palustris, Elymus cinereus, Equisetum hyemale, Eriogonum compositum, Juniperus trichocarpa, Phalaris arundinacea, Poa compressa. Salk exigua, Scirpus acutus, Solidago occidentalis, Sporobolus asper,and Sporobolus cryptandrus. This letter report documents the data received, the processing by PNNL staff, and additional data gathered in

Wild food plants used by the Tibetans of Gongba Valley (Zhouqu county, Gansu, China)

PubMed Central

2014-01-01

Background The ethnobotany of Tibetans is a seriously under-studied topic. The aim of the study was to investigate knowledge and use of wild food plants in a valley inhabited by Tibetans in the Gannan Tibetan Autonomous Region. Methods The field research was carried out in a wooded mountain valley in 9 neighbouring villages the Zhouqu (Brugchu) county, and comprised 17 interviews with single informants and 14 group interviews, involving 122 people altogether. Results We recorded the use of 81 species of vascular plants from 41 families. Fruits formed the largest category, with 42 species, larger than the wild greens category, with 36 species. We also recorded the culinary use of 5 species of edible flowers, 7 species with underground edible organs and 5 taxa of fungi. On average, 16.2 edible taxa were listed per interview (median – 16). Green vegetables formed the largest category of wild foods (mean – 8.7 species, median – 9 species), but fruits were listed nearly as frequently (mean – 6.9, median – 6). Other categories were rarely mentioned: flowers (mean – 0.2, median – 0), underground edible parts (mean – 0.3, median – 0) and mushrooms (mean – 1.5, – median 1). Wild vegetables are usually boiled and/or fried and served as side-dishes (cai). They are often lacto-fermented. Wild fruits are mainly collected by children and eaten raw, they are not stored for further use. The most widely used wild vegetables are: Eleuterococcus spp., Pteridium aquilinum, Helwingia japonica, Aralia chinensis, Allium victorialis, Pteridium aquilinum, Ixeris chinensis, Thlaspi arvense and Chenopodium album. The culinary use of Caltha palustris as a green vegetable is very interesting. In its raw state, marsh marigold is a toxic plant, due to the presence of protoanemonin. In this area it is dried or lactofermented before use. The most commonly eaten fruits are: Pyrus xerophila, Prunus salicina, Berchemia sinica, Rubus spp. and Eleagnus umbellata. Conclusions The

Vegetation and Mammuthus primigenius extinction history on St Paul Island, Alaska

NASA Astrophysics Data System (ADS)

Wang, Y.; Newsom, L.; Belmecheri, S.; Culleton, B.; Williams, J. W.

2014-12-01

St. Paul Island, AK, part of the Pribilofs, is an island remnant of the Bering Land Bridge, a possible coastal Picea refugium at the last glacial maximum, and a Holocene refugium for Mammuthus primigenius. A prior pollen record from Lake Hill indicates that St. Paul was predominantly herb tundra during the last glacial maximum followed by a shrub tundra in the early Holocene (Colinvaux, 1980). Subsequently, three radiocarbon dates on bones from Qagnax Cave indicate a last appearance of Mammuthus primigenius of 6.5 ka on St. Paul (Veltre et al. 2008). In March 2013, our team retrieved a 13.5 m composite core from Lake Hill to refine the extinction timing chronology, assess environmental change during the extinction interval, and test hypotheses about vegetation-megafauna feedback. This paper reports the results from modern botanical survey and analyses of fossil pollen, Sporormiella and other coprophilous spores, anchored by a new radiocarbon chronology consisting of seven AMS dates. Presently, bryophytes, Equisetum, Poaceae, Juncaceae, Salix and Viola commonly occur at the lake margin, accompanied increasingly by sedge meadow taxa with greater distance from the water's edge, especially Cyperaceae, Asteraceae, Apiaceae, Lupinus, Rubus and Valeriana. Sporormiella is consistently present in low abundances (2%, ~700 grains/cm3) in the late glacial and early Holocene until a drop to zero at 6,050 yr BP, remaining absent during the middle and late Holocene when it reappears at 1904 AD. The timing of Sporormiella decline and reappearance match well to the youngest mammoth bone date and the historic reintroduction of reindeer (1911 AD) on St. Paul Island. After 11 ka, major pollen types include Apiaceae, Poaceae, Cyperaceae, Artemisia and Salix, with lower abundances of Betula, Alnus and Ericaceae, consistent with herb tundra with some shrubs. Degraded Picea pollen grains are found at 12,240 yr BP in very low concentrations (223 grains/cm3), indicating long

High resolution bathymetric and sonar images of a ridge southeast of Terceira Island (Azores plateau)

NASA Astrophysics Data System (ADS)

Lourenço, N.; Miranda, J. M.; Luis, J.; Silva, I.; Goslin, J.; Ligi, M.

2003-04-01

The Terceira rift is a oblique ultra-slow spreading system where a transtensive regime results from differential movement between Eurasian and African plates. So far no classical ridge segmentation pattern has here been observed. The predominant morphological features are fault controlled rhombic shaped basins and volcanism related morphologies like circular seamounts and volcanic ridges. We present SIMRAD EM300 (bathymetry + backscatter) images acquired over one of these ridges located SE of Terceira Island, during the SIRENA cruise (PI J. Goslin), which complements previous TOBI mosaics performed over the same area during the AZZORRE99 cruise (PI M. Ligi). The ridge presents a NW-SE orientation, it is seismically active (a seismic crisis was documented in 1997) and corresponds to the southern branch of a V shape bathymetric feature enclosing the Terceira Island and which tip is located west of the Island near the 1998 Serreta ridge eruption site. NE of the ridge, the core of the V, corresponds to the North Hirondelle basin. All this area corresponds mainly to Brunhes magnetic epoch. The new bathymetry maps reveal a partition between tectonic processes, centred in the ridge, and volcanism present at the bottom of the North Hirondelle basin. The ridge high backscatter surface is cut by a set of sub-parallel anastomosed normal faults striking between N130º and N150º. Some faults present horse-tail terminations. Fault splays sometimes link to neighbour faults defining extensional duplexes and fault wedge basins and highs of rhombic shape. The faulting geometry suggests that a left-lateral strike slip component should be present. The top of the ridge consists on an arched demi-.horst, and it is probably a volcanic structure remnant (caldera system?), existing prior to onset of the tectonic stage in the ridge. Both ridge flanks display gullies and mass wasting fans at the base of the slope. The ridge vicinities are almost exclusively composed of a grayish homogeneous

Spatiotemporal relationships among Late Pennsylvanian plant assemblages: Palynological evidence from the Markley Formation, West Texas, U.S.A.

PubMed

Looy, Cindy V; Hotton, Carol L

2014-12-01

The Pennsylvanian lowlands of western Pangea are best known for their diverse wetland floras of arborescent and herbaceous ferns, and arborescent horsetails and clubmosses. In apparent juxtaposition, a very different kind of flora, dominated by a xerophilous assemblage of conifers, taeniopterids and peltasperms, is occasionally glimpsed. Once believed to represent upland or extrabasinal floras from well-drained portions of the landscape, these dryland floras more recently have been interpreted as lowland assemblages growing during drier phases of glacial/interglacial cycles. Whether Pennsylvanian dryland and wetland floras were separated spatially or temporally remains an unsettled question, due in large part to taphonomic bias toward preservation of wetland plants. Previous paleobotanical and sedimentological analysis of the Markley Formation of latest Pennsylvanian (Gzhelian) age, from north central Texas, U.S.A, indicates close correlation between lithofacies and distinct dryland and wetland megaflora assemblages. Here we present a detailed analysis one of those localities, a section unusual in containing abundant palynomorphs, from the lower Markley Formation. Paleobotanical, palynological and lithological data from a section thought to represent a single interglacial/glacial phase are integrated and analyzed to create a complex picture of an evolving landscape. Megafloral data from throughout the Markley Formation show that conifer-dominated dryland floras occur exclusively in highly leached kaolinite beds, likely eroded from underlying soils, whereas a mosaic of wetland floras occupy histosols, ultisols, and fluvial overbank deposits. Palynological data largely conform to this pattern but reveal a more complex picture. An assemblage of mixed wetland and dryland palynofloral taxa is interpolated between a dryland assemblage and an overlying histosol containing wetland taxa. In this section, as well as elsewhere in the Markley Formation, kaolinite and overlying

Spatiotemporal relationships among Late Pennsylvanian plant assemblages: Palynological evidence from the Markley Formation, West Texas, U.S.A

PubMed Central

Looy, Cindy V.; Hotton, Carol L.

2014-01-01

The Pennsylvanian lowlands of western Pangea are best known for their diverse wetland floras of arborescent and herbaceous ferns, and arborescent horsetails and clubmosses. In apparent juxtaposition, a very different kind of flora, dominated by a xerophilous assemblage of conifers, taeniopterids and peltasperms, is occasionally glimpsed. Once believed to represent upland or extrabasinal floras from well-drained portions of the landscape, these dryland floras more recently have been interpreted as lowland assemblages growing during drier phases of glacial/interglacial cycles. Whether Pennsylvanian dryland and wetland floras were separated spatially or temporally remains an unsettled question, due in large part to taphonomic bias toward preservation of wetland plants. Previous paleobotanical and sedimentological analysis of the Markley Formation of latest Pennsylvanian (Gzhelian) age, from north central Texas, U.S.A, indicates close correlation between lithofacies and distinct dryland and wetland megaflora assemblages. Here we present a detailed analysis one of those localities, a section unusual in containing abundant palynomorphs, from the lower Markley Formation. Paleobotanical, palynological and lithological data from a section thought to represent a single interglacial/glacial phase are integrated and analyzed to create a complex picture of an evolving landscape. Megafloral data from throughout the Markley Formation show that conifer-dominated dryland floras occur exclusively in highly leached kaolinite beds, likely eroded from underlying soils, whereas a mosaic of wetland floras occupy histosols, ultisols, and fluvial overbank deposits. Palynological data largely conform to this pattern but reveal a more complex picture. An assemblage of mixed wetland and dryland palynofloral taxa is interpolated between a dryland assemblage and an overlying histosol containing wetland taxa. In this section, as well as elsewhere in the Markley Formation, kaolinite and overlying

Present-day crustal motion along the Longitudinal Valley Fault, eastern Taiwan

NASA Astrophysics Data System (ADS)

Yu, Shui-Beih; Kuo, Long-Chen

2001-04-01

The NNE-striking Longitudinal Valley Fault (LVF) in eastern Taiwan is an extremely active high-angle thrust fault. It bounds the Coastal Range and the Longitudinal Valley, which is considered a collision boundary between the Philippine Sea and the Eurasian plates. Repeated GPS data in the Longitudinal Valley area from 1992 to 1999 are utilized to study the spatial variation of crustal motion along the LVF. With respect to Penghu in the Chinese continental margin, velocities for stations on the western side of the LVF (Longitudinal Valley and eastern Central Range) are 18-35 mm/yr in directions 283-311°, whereas those on the eastern side of the LVF, the Coastal Range, are 28-68 mm/yr in directions 303-324°. A major discontinuity of about 30 mm/yr on the rate of crustal motion across the Longitudinal Valley is attributed to the aseismic slip along the LVF as revealed by trilateration data previously. To the south of Fengping, the block motions of the Coastal Range are 31-40 mm/yr in 317-330° relative to the Central Range, while the near-fault motions are 13-33 mm/yr in 309-336°. Various partitions on the left-lateral strike-slip and convergent components along the LVF are found. In the southern Longitudinal Valley crustal motion is mainly accommodated on the LVF and the Luyeh Fault. In contrast, those in the central and northern Longitudinal Valley are partly taken up on the faults to the east of the LVF or result in the elastic deformation of the Coastal Range. The crustal motion in the northern Longitudinal Valley area is likely to be distributed in the several NE-striking thrusts in a horsetail pattern and obliquely cut the northern Coastal Range, with a small portion of fault-slips along the LVF. Data from dense-deployed GPS networks across the LVF can be employed to give better estimates of near-fault motions and delineate the surface traces of the LVF. Repeated GPS and leveling data from two stations on both ends of the Yuli Bridge that are 575 m apart

Outstanding accumulation of Sphagnum palustre in central-southern Italy

NASA Astrophysics Data System (ADS)

Casella, Laura; Zaccone, Claudio

2017-04-01

Lake Fibreno is a site where some outstanding anomalies for the flora and vegetation of the wetlands of peninsular Italy are concentrated. Here one the southernmost European population of Sphagnum palustre occurs, and is restricted on the surface of a free-floating island, i.e., a round-shaped portion of fen (with a core of Sphagnum), erratically floating on the surface of a submerged sinkhole. Geological evidences point out the existence in the area of a large lacustrine basin since Late Pleistocene. The progressive filling of the lake, caused by changing in climatic conditions and neotectonic events, resulted in the formation of peat deposits in the area, following different depositional cycles in a swampy environment. So that, the studied free-floating island, probably originated around lake margins in the waterlogged area, was somehow isolated from the bank and started to float. Once the separation occurred, sedge peat stopped to accumulate, thus enhancing the role of S. palustre as the main peat-forming plant. The vegetation occurring at the moment of the isolation of the island was a coverage of Salix cinerea/Populus tremula stands below which cushions of moss and, in a lower extent, Thelypteris palustris/Equisetum palustre accumulated resulting in the formation of 2-3 meters of peat dominated by reeds and sedges. This vegetation has been partially degraded by grazing until 1970s, while in 1980s the lake became a nature reserve. Since then, the succession could resume in a spontaneous and natural way and it was possible for the vegetation to recover to natural dynamics and growing rate. The Sphagnum tussocks were measured in an empirical way at a distance of about 60 years after the last signaling and the result was a measurement of an accretion open to about 70 cm thick. Moreover, in a recent study, a 4-m deep peat core was collected from the centre of the island and results were surprising. In fact, 14C age dating, confirmed using 210Pb and 137Cs, showed

Depositional environments and processes in Upper Cretaceous nonmarine and marine sediments, Ocean Point dinosaur locality, North Slope, Alaska

USGS Publications Warehouse

Phillips, R.L.

2003-01-01

A 178-m-thick stratigraphic section exposed along the lower Colville River in northern Alaska, near Ocean Point, represents the uppermost part of a 1500 m Upper Cretaceous stratigraphic section. Strata exposed at Ocean Point are assigned to the Prince Creek and Schrader Bluff formations. Three major depositional environments are identified consisting, in ascending order, of floodplain, interdistributary-bay, and shallow-marine shelf. Nonmarine strata, comprising the lower 140 m of this section, consist of fluvial distributaries, overbank sediments, tephra beds, organic-rich beds, and vertebrate remains. Tephras yield isotopic ages between 68 and 72.9 Ma, generally consistent with paleontologic ages of late Campanian-Maastrichtian determined from dinosaur remains, pollen, foraminifers, and ostracodes. Meandering low-energy rivers on a low-gradient, low-relief floodplain carried a suspended-sediment load. The rivers formed multistoried channel deposits (channels to 10 m deep) as well as solitary channel deposits (channels 2-5 m deep). Extensive overbank deposits resulting from episodic flooding formed fining-upward strata on the floodplain. The fining-upward strata are interbedded with tephra and beds of organic-rich sediment. Vertical-accretion deposits containing abundant roots indicate a sheet flood origin for many beds. Vertebrate and nonmarine invertebrate fossils along with plant debris were locally concentrated in the floodplain sediment. Deciduous conifers as well as abundant wetland plants, such as ferns, horsetails, and mosses, covered the coastal plain. Dinosaur skeletal remains have been found concentrated in floodplain sediments in organic-rich bone beds and as isolated bones in fluvial channel deposits in at least nine separate horizons within a 100-m-thick interval. Arenaceous foraminifers in some organic-rich beds and shallow fluvial distributaries indicate a lower coastal plain environment with marginal marine (bay) influence. Marginal marine strata

Fault analysis as part of urban geothermal exploration in the German Molasse Basin around Munich

NASA Astrophysics Data System (ADS)

Ziesch, Jennifer; Tanner, David C.; Hanstein, Sabine; Buness, Hermann; Krawczyk, Charlotte M.; Thomas, Rüdiger

2017-04-01

Faults play an essential role in geothermal exploration. The prediction of potential fluid pathways in urban Munich has been started with the interpretation of a 3-D seismic survey (170 km2) that was acquired during the winter of 2015/2016 in Munich (Germany) within the Bavarian Molasse Basin. As a part of the research project GeoParaMoL*, we focus on the structural interpretation and retro-deformation analysis to detect sub-seismic structures within the reservoir and overburden. We explore the hydrothermal Malm carbonate reservoir (at a depth of 3 km) as a source of deep geothermal energy and the overburden of Tertiary Molasse sediments. The stratigraphic horizons, Top Aquitan, Top Chatt, Top Bausteinschichten, Top Lithothamnien limestone (Top Eocene), Top and Base Malm (Upper Jurassic), together with the detailed interpretation of the faults in the study area are used to construct a 3-D geological model. The study area is characterised by synthetic normal faults that strike parallel to the alpine front. Most major faults were active from Upper Jurassic up to the Miocene. The Munich Fault, which belongs to the Markt-Schwabener Lineament, has a maximum vertical offset of 350 metres in the central part, and contrary to previous interpretation based on 2-D seismic, this fault dies out in the eastern part of the area. The south-eastern part of the study area is dominated by a very complex fault system. Three faults that were previously detected in a smaller 3-D seismic survey at Unterhaching, to the south of the study area, with strike directions of 25°, 45° and 70° (Lüschen et al. 2014), were followed in to the new 3-D seismic survey interpretation. Particularly noticeable are relay ramps and horst/graben structures. The fault with a strike of 25° ends in three big sinkholes with a maximum vertical offset of 60 metres. We interpret this special structure as fault tip horsetail-structure, which caused a large amount of sub-seismic deformation. Consequently, this

Nutrient cycling potential of camelina (Camelina sativa L. Crantz.) as a cover crop in the US Northern Great Plains

NASA Astrophysics Data System (ADS)

Berti, Marisol; Samarappuli, Dulan

2017-04-01

Camelina [Camelina sativa (L.) Crantz.] is an industrial oilseed crop in the Brassicaceae family with multiple uses. Currently, camelina is not used as a cover crop, but it has the potential to be used as such in maize-soybean-wheat cropping systems. The objectives of this study were to determine the agronomic performance and nutrient scavenging potential of winter camelina in comparison with other common cover crops. Experiments were conducted in Fargo, ND in 2015 and 2016, and in Prosper, ND in 2015. The experimental design was a randomized complete block design with a split-plot arrangement with three replicates. The main plot was the sowing date and the subplot were camelina cultivars as well as other common cover crops in the area. Sowing dates were targeted to 15 August and September 1, although the final dates varied slightly each year. Biomass yield, N content of the biomass N uptake and P uptake was evaluated. Winter camelina N and P uptake ranged between 21 and 30.5 kg N ha-1 and 3.4 to 5.3 kg P ha-1. The nutrient scavenging potential of winter camelina was similar to other cover crops although slightly lower than turnip (Brassica rapa L.), radish (Raphanus sativus L.), and rape (Brassica napus L.) cultivars which had significantly higher P uptake than winter camelina and the other cover crops in the study. An evaluation of spring regrowth and cover indicated that only rye, winter camelina, and pennycress (Thlaspi arvense L.) survived the winter, although a few plants of triticale (x Trticosecale Witt.) and rape were found on a few plots. Because of the high variability on the plots there were no significant differences among the surviving cover crops on soil coverage. The soil coverage for rye cultivars was 25 and 35% and for camelina cv. Bison was 27%.In 2016, biomass yield was not significant for sowing date, cultivars, or their interaction. Winter camelina cultivars biomass yield fluctuated between 1.15 and 2.33 Mg dry matter ha-1 on the first sowing

Following the Cantabrian (Ventaniella) fault into the Bay of Biscay: a deeply incised canyon, a change of trend, and 20002 km of unstable continental slope

NASA Astrophysics Data System (ADS)

Fernandez Viejo, G.; Lopez-Fernandez, C.; Dominguez-Cuesta, M.

2012-12-01

are big, it does not seem to pose an immediate hazard, as they all show a short run-out distance and, being the actual seismicity of low grade, it is not enough to trigger the fall of the unstable slope. The Ventaniella fault runs in the continental shelf and slope in NW-SE direction, but it also has been deduced with the new data a secondary fault trace slightly more W-E, interpreted as a termination in horsetail of the main strike-slip feature. Both structures seem to be responsible for the seismicity and the mass wasting processes observed along this strip of the Cantabrian margin.

Tectonic and Structural Controls of Geothermal Activity in the Great Basin Region, Western USA

NASA Astrophysics Data System (ADS)

Faulds, J. E.; Hinz, N.; Kreemer, C. W.

2012-12-01

faults connect major structures and fluids can flow readily through highly fractured, dilational quadrants, and b) normal fault terminations or tip-lines (22%), where horse-tailing generates closely-spaced faults and increased permeability. Other settings include accommodation zones (i.e., belts of intermeshing, oppositely dipping normal faults; 8%), major range-front faults (5-6%), and pull-aparts in strike-slip faults (4%). In addition, Quaternary faults lie within or near most systems. The relative scarcity of geothermal systems along displacement-maxima of major normal faults may be due to reduced permeability in thick zones of clay gouge and periodic release of stress in major earthquakes. Step-overs, terminations, intersections, and accommodation zones correspond to long-term, critically stressed areas, where fluid pathways are more likely to remain open in networks of closely-spaced, breccia-dominated fractures. These findings may help guide future exploration efforts, especially for blind geothermal systems, which probably comprise the bulk of the geothermal resources in the Great Basin.

Coupled geohazards at Southern Andes (Copahue-Lanín volcanoes): Chile's GEO supersite proposal

NASA Astrophysics Data System (ADS)

Lara, Luis E.; Cordova, Loreto

2017-04-01

Southern Andes are a young and active mountain belt where volcanism and tectonic processes (and those related to the hydrometeorological conditions controlled by this geological setting) pose a significant threat to the growing communities nearby. This proposal focus on a ca. 200 km long segment of the Southern Andes where 9 stratovolcanoes and 2 distributed volcanic fields are located, just along a tectonic corridor defined by the northern segment of the Liquiñe-Ofqui Faul System (LOFS), a long-lived active strike-slip fault running for 1200 km. Volcanoes in this area take part of the central province of the Andean Southern Volcanic Zone (37-41°S), particularly the northermost portion that is limited at the south by an Andean tranverse fault (Lanalhue Fault, which define the Villarrica-Lanin volcanic chain) and run along the horse-tail array of the LOFS to the north. Most of the stravolcanoes are atop of the LOFS main branch with only 3 exceptions (Callaqui, Tolhuaca and Lanín) 15-20 km away, but related to transverse faults. Hazards in the segment derive from the activity of some of the most active volcanoes in South America (e.g., Villarrica, Llaima), others with long-lasting weak activity (e.g., Copahue) or some volcanoes with low frequency but high magnitude eruptions in the geological record. Only since the beggining of the 20th century 80 eruptions have been recorded in this area. In addition, activity of the LOFS has been detected prior to some eruptions and coeval with some others (e.g., Lonquimay 1989). A strong two-way coupling between tectonics and volcanism has been proposed for the segment but only recently detected by geophysical techniques or numerical modelling. Tectonic triggered landslides are frequent in this region together with debris flows at erupting ice-covered volcanoes or stream headed at high altitude basins. The latter scenario seems to be worst at present because of global climate change. Ground-based monitoring networks for both

Classifying GABAergic interneurons with semi-supervised projected model-based clustering.

PubMed

Mihaljević, Bojan; Benavides-Piccione, Ruth; Guerra, Luis; DeFelipe, Javier; Larrañaga, Pedro; Bielza, Concha

2015-09-01

A recently introduced pragmatic scheme promises to be a useful catalog of interneuron names. We sought to automatically classify digitally reconstructed interneuronal morphologies according to this scheme. Simultaneously, we sought to discover possible subtypes of these types that might emerge during automatic classification (clustering). We also investigated which morphometric properties were most relevant for this classification. A set of 118 digitally reconstructed interneuronal morphologies classified into the common basket (CB), horse-tail (HT), large basket (LB), and Martinotti (MA) interneuron types by 42 of the world's leading neuroscientists, quantified by five simple morphometric properties of the axon and four of the dendrites. We labeled each neuron with the type most commonly assigned to it by the experts. We then removed this class information for each type separately, and applied semi-supervised clustering to those cells (keeping the others' cluster membership fixed), to assess separation from other types and look for the formation of new groups (subtypes). We performed this same experiment unlabeling the cells of two types at a time, and of half the cells of a single type at a time. The clustering model is a finite mixture of Gaussians which we adapted for the estimation of local (per-cluster) feature relevance. We performed the described experiments on three different subsets of the data, formed according to how many experts agreed on type membership: at least 18 experts (the full data set), at least 21 (73 neurons), and at least 26 (47 neurons). Interneurons with more reliable type labels were classified more accurately. We classified HT cells with 100% accuracy, MA cells with 73% accuracy, and CB and LB cells with 56% and 58% accuracy, respectively. We identified three subtypes of the MA type, one subtype of CB and LB types each, and no subtypes of HT (it was a single, homogeneous type). We got maximum (adapted) Silhouette width and ARI values of

Historical Earthquake Scenarios and Effects on the Ancient City of İstanbul (A.D. 478 - 1999)

NASA Astrophysics Data System (ADS)

Şahin, Murat; Elitez, İrem; Özmen, Aybars; Yaltırak, Cenk

2016-04-01

Active fault mapping is one of the most important subject in the active tectonic studies. The consistency of the active fault maps with the reality is curial for the settlements and socio-economic conditions. The Marmara region is one of the precious area where the longest duration settlement and civilization are observed along a fault system. The Marmara Sea and its surrounding area are unique on the earth which has the remarkable history of 1500 years in non-instrumental period. Because, İstanbul was the capital city of both Byzantium and Ottoman Empire and the historical records of İstanbul are reliable for this environment such as A.D. 1509 earthquake known as 'little apocalypse'. Although the active faults of the Marmara Sea have studied and mapped by many researchers, there are only three different main fault model suggested for the Marmara Sea. These are single fault model (Le Pichon et al., 2001), pull-apart model (Armijo et al., 2005) and horsetail model (Yaltırak, 2002; 2015). Yaltırak (2015) grouped the 38 destructive historical earthquakes according to their felt area for these three fault models in the Marmara region. In this study we have modelled the Modified Mercalli Intensities (MMI) of historical buildings and cross checked with damages on the related structure in order to investigate the consistency of fault pattern with historical earthquakes. In this study three-stage evaluation has been made. In the first stage, three models that differ from each other were prepared on a database in commercial ArcGIS software. Mw values were calculated for each segment according to their lengths, seismogenic depths and 18 mm/yr accumulation by using the equation of Kanamori (1977). In the second stage, the 1:25000-scale geological map of the ancient city of İstanbul was revised according to Vs30 data of the İstanbul Metropolitan Municipality. The exact location of the historical constructions in the İstanbul have been plotted by using non

Structural Controls of Neal Hot Springs Geothermal Field, Malhuer County, Oregon

NASA Astrophysics Data System (ADS)

Edwards, J. H.; Faulds, J. E.

2012-12-01

Detailed mapping (1:24,000) of the Neal Hot Springs area (90 km2) in eastern Oregon is part of a larger study of geothermal systems in the Basin and Range, which focuses on the structural controls of geothermal activity. The study area lies within the intersection of two regional grabens, the middle-late Miocene, N-striking, Oregon-Idaho graben and younger late Miocene to Holocene, NW-striking, western Snake River Plain graben. The geothermal field is marked by Neal Hot Springs, which effuse from opaline sinter mounds just north of Bully Creek. Wells producing geothermal fluids, with temperatures at 138°C, intersect a major, W-dipping, NNW-striking, high-angle normal fault at depths of 850-915 m. Displacement along this structure dies southward, with likely horse-tailing, which commonly produces high fracture density and a zone of high permeability conducive for channeling hydrothermal fluids. Mapping reveals that the geothermal resource lies within a local, left step-over. 'Hard-linkage' between strands of the left-stepping normal fault, revealed through a study of well chips and well logs, occurs through two concealed structures. Both are W-striking faults, with one that runs parallel to Cottonwood Creek and one 0.5 km N of the creek. Injection wells intersect these two transverse structures within the step-over. Stepping and displacement continue to the NW of the known geothermal field, along W-dipping, N-striking faults that cut lower to middle Miocene Hog Creek Formation, consisting of silicic and mafic volcanic rocks. These N-striking faults were likely initiated during initial Oregon-Idaho graben subsidence (15.3-15.1 Ma), with continued development through late Miocene. Bully Creek Formation deposits, middle to upper Miocene lacustrine and pyroclastic rocks, concomitantly filled the sub half-grabens, and they dip gently to moderately eastward. Younger, western Snake River Plain deposits, upper Miocene to Pliocene fluvial, lacustrine, and pyroclastic rocks

Changes in vegetation structure in seeded nesting cover in the prairie pothole region

USGS Publications Warehouse

Higgins, K.F.; Barker, W.T.

1982-01-01

needing special management attention on public lands are leafy spurge (Euphorbia podperae), wormwood (Artemisia absinthium), Canada thistle (Cirsium arvense), musk thistle (Carduus nutans), and plumeless thistle (Carduus acanthoides). Sites disturbed by mammal diggings or those skipped during planting operations became revegetated mostly with species other than those of seeded nesting cover.Successfully established stands on good sites provided substantial food and cover for wildlife for at least 6 years and retained stand composition for at least 10 years. Further study will be necessary to determine longevity of these stands. Except for mandatory noxious weed control, no management treatments of seeded nesting cover were necessary before the seventh growing season, at which time some stands needed renovation. The primary goals for management of seeded nesting cover should be stand quality and longevity. Guidelines to these goals are suggested.

Symbiotic fungal associations in 'lower' land plants.

PubMed Central

Read, D J; Ducket, J G; Francis, R; Ligron, R; Russell, A

2000-01-01

An analysis of the current state of knowledge of symbiotic fungal associations in 'lower' plants is provided. Three fungal phyla, the Zygomycota, Ascomycota and Basidiomycota, are involved in forming these associations, each producing a distinctive suite of structural features in well-defined groups of 'lower' plants. Among the 'lower' plants only mosses and Equisetum appear to lack one or other of these types of association. The salient features of the symbioses produced by each fungal group are described and the relationships between these associations and those formed by the same or related fungi in 'higher' plants are discussed. Particular consideration is given to the question of the extent to which root fungus associations in 'lower' plants are analogous to 'mycorrhizas' of 'higher' plants and the need for analysis of the functional attributes of these symbioses is stressed. Zygomycetous fungi colonize a wide range of extant lower land plants (hornworts, many hepatics, lycopods, Ophioglossales, Psilotales and Gleicheniaceae), where they often produce structures analogous to those seen in the vesicular-arbuscular (VA) mycorrhizas of higher plants, which are formed by members of the order Glomales. A preponderance of associations of this kind is in accordance with palaeohbotanical and molecular evidence indicating that glomalean fungi produced the archetypal symbioses with the first plants to emerge on to land. It is shown, probably for the first time, that glomalean fungi forming typical VA mycorrhiza with a higher plant (Plantago lanceolata) can colonize a thalloid liverwort (Pellia epiphylla), producing arbuscules and vesicles in the hepatic. The extent to which these associations, which are structurally analogous to mycorrhizas, have similar functions remains to be evaluated. Ascomycetous associations are found in a relatively small number of families of leafy liverworts. The structural features of the fungal colonization of rhizoids and underground axes of

Symbiotic fungal associations in 'lower' land plants.

PubMed

Read, D J; Ducket, J G; Francis, R; Ligron, R; Russell, A

2000-06-29

An analysis of the current state of knowledge of symbiotic fungal associations in 'lower' plants is provided. Three fungal phyla, the Zygomycota, Ascomycota and Basidiomycota, are involved in forming these associations, each producing a distinctive suite of structural features in well-defined groups of 'lower' plants. Among the 'lower' plants only mosses and Equisetum appear to lack one or other of these types of association. The salient features of the symbioses produced by each fungal group are described and the relationships between these associations and those formed by the same or related fungi in 'higher' plants are discussed. Particular consideration is given to the question of the extent to which root fungus associations in 'lower' plants are analogous to 'mycorrhizas' of 'higher' plants and the need for analysis of the functional attributes of these symbioses is stressed. Zygomycetous fungi colonize a wide range of extant lower land plants (hornworts, many hepatics, lycopods, Ophioglossales, Psilotales and Gleicheniaceae), where they often produce structures analogous to those seen in the vesicular-arbuscular (VA) mycorrhizas of higher plants, which are formed by members of the order Glomales. A preponderance of associations of this kind is in accordance with palaeohbotanical and molecular evidence indicating that glomalean fungi produced the archetypal symbioses with the first plants to emerge on to land. It is shown, probably for the first time, that glomalean fungi forming typical VA mycorrhiza with a higher plant (Plantago lanceolata) can colonize a thalloid liverwort (Pellia epiphylla), producing arbuscules and vesicles in the hepatic. The extent to which these associations, which are structurally analogous to mycorrhizas, have similar functions remains to be evaluated. Ascomycetous associations are found in a relatively small number of families of leafy liverworts. The structural features of the fungal colonization of rhizoids and underground axes of

Pseudotachylitic breccia in mafic and felsic rocks

NASA Astrophysics Data System (ADS)

Kovaleva, Elizaveta; Huber, Matthew S.

2017-04-01

Impact-produced pseudotachylitic breccia (PTB) is abundant in the core of the Vredefort impact structure and was found in many pre-impact lithologies (e.g., Reimold and Colliston, 1994; Gibson et al., 1997). The mechanisms involved in the process of forming this rock remain highly debated, and various authors have discussed many possible models. We investigate PTB from two different rock types: meta-granite and meta-gabbro and test how lithology controls the development of PTB. We also report on clast transport between different lithologies. In the core of the Vredefort impact structure, meta-granite and meta-gabbro are observed in contact with each other, with an extensive set of PTB veins cutting through both lithologies. Microstructural analyses of the PTB veins in thin sections reveals differences between PTBs in meta-granite and meta-gabbro. In granitic samples, PTB often develops along contacts of material with different physical properties, such as a contact with a migmatite or pegmatite vein. Nucleation sites of PTB have features consistent with ductile deformation and shearing, such as sigmoudal-shaped clasts and dragged edges of the veins. Preferential melting of mafic and hydrous minerals takes place (e.g., Reimold and Colliston, 1994; Gibson et al., 2002). Refractory phases remain in the melt as clasts and form reaction rims. In contrast, PTB in meta-gabbro develop in zones with brittle deformation, and do not exploit existing physical contacts. Cataclastic zones develop along the faults and progressively produce ultracataclasites and melt. Thus, PTB veins in meta-gabbro contain fewer clasts. Clasts usually represent multi-phase fragments of host rock and not specific phases. Such fragments often originate from the material trapped between two parallel or horse-tail faults. The lithological control on the development of PTB does not imply that PTB develops independently in different lithologies. We have observed granitic clasts within PTB veins in meta

Geodynamics of the South China Sea

NASA Astrophysics Data System (ADS)

Sibuet, Jean-Claude; Yeh, Yi-Ching; Lee, Chao-Shing

2016-12-01

in the Xisha trough and eventually south of the Macclesfield Bank extends to the Qui Nhon ridge, located along the eastern margin of Vietnam, in the southward prolongation of the Red River fault system. Normal faults curve toward the south with a horsetail geometry interpreted as evidence for a few tens of kilometers of dextral motion along the Qui Nhon ridge. Since chron 10 and until the end of SCS opening, the plate boundary located between the southern South China Sea (SSCS) and EU plates jumped westward several times from the location of the Ulugan fault near Palawan to the western limit of the southwest basin, explaining the progressive formation of the SCS from east to west and giving the characteristic V-shape of the SCS. The opening of the whole SCS is linked and occurred simultaneously with the northward subduction of the proto-SCS whose suture is located south of Palawan and extends westwards in north Borneo.

Influence of different kind of peats on some physic-chemical properties, biochemical activity, the content of different forms of nitrogen and fractions of humic substances of The Great Vasyugan Mire

NASA Astrophysics Data System (ADS)

Inisheva, L. I.; Szajdak, L.

2009-04-01

Mires, or peatlands belong to the wetlands ecosystems where carbon is bounded in primary production and deposited as peat in water saturated, anoxic conditions. In those conditions, the rate of the supply of new organic matter has exceeded that the decomposition, resulting in carbon accumulation. Place of sampling belongs to an oligotrophic landscapes of the river Klyuch basin in spurs of Vasyugan mire. The catchment represents reference system for Bokchar swampy area (political district of Tomsk region). Landscape profile crosses main kinds of swampy biogeocoenosis (BGC) toward the mire center: paludal tall mixed forest, pine undershrub Sphagnum (high riam, trans-accumulative part of a profile, P2), pine-undershrub Sphagnum (low riam, transit part, P3), sedge-moss swamp (eluvial part, P5). The latter represents an eluvial part of a slope of watershed massif where it is accomplished discharge of excess, surface, soil-mire waters. The depth of peat deposit of sedge-moss swamp reaches 2,5m. To the depth of 0,6m there is a layer of Sphagnum raised bog peat, then it is a mesotrophic Scheuchzeria Sphagnum layer and at the bottom there is a thick layer of low-mire horsetail peat. The samples of peats were taken from two places (P2 and P3), both from the depth 0-75 cm of the great Vasyugan Mire. These materials represent (P2) Sphagnum fuscum peat (ash content ranged from 10.8 to 15.1%), but samples P3 belong to low-moor sedge peat (ash content ranged from 4.5-4.8%). The differences in water level, redox potential, pH, degree of degradation, bulk density, number of microorganisms, activity of enzymes, different kinds of nitrogen and humic substances were studied in two different peat soils characterized by different type of peat. In general in P2 the redox potential changed from 858 to /-140/ mV, higher activity of xanthine oxidase and peroxidase, different kinds of microorganisms (ammonifing bacteria and cellulose decomposing microorganisms) and different kinds of

Trends and concepts in fern classification.

PubMed

Christenhusz, Maarten J M; Chase, Mark W

2014-03-01

the whisk ferns (Psilotaceae), often included in the lycopods or believed to be associated with the first vascular plants, are sister to Ophioglossaceae and thus belong to the fern clade. The horsetails (Equisetaceae) are also members of the fern clade (sometimes inappropriately called 'monilophytes'), but, within that clade, their placement is still uncertain. Leptosporangiate ferns are better understood, although deep relationships within this group are still unresolved. Earlier, almost all leptosporangiate ferns were placed in a single family (Polypodiaceae or Dennstaedtiaceae), but these families have been redefined to narrower more natural entities. Concluding this paper, a classification is presented based on our current understanding of relationships of fern and lycopod clades. Major changes in our understanding of these families are highlighted, illustrating issues of classification in relation to convergent evolution and false homologies. Problems with the current classification and groups that still need study are pointed out. A summary phylogenetic tree is also presented. A new classification in which Aspleniaceae, Cyatheaceae, Polypodiaceae and Schizaeaceae are expanded in comparison with the most recent classifications is presented, which is a modification of those proposed by Smith et al. (2006, 2008) and Christenhusz et al. (2011). These classifications are now finding a wider acceptance and use, and even though a few amendments are made based on recently published results from molecular analyses, we have aimed for a stable family and generic classification of ferns.

Trends and concepts in fern classification

PubMed Central

Christenhusz, Maarten J. M.; Chase, Mark W.

2014-01-01

sister to all other vascular plants, whereas the whisk ferns (Psilotaceae), often included in the lycopods or believed to be associated with the first vascular plants, are sister to Ophioglossaceae and thus belong to the fern clade. The horsetails (Equisetaceae) are also members of the fern clade (sometimes inappropriately called ‘monilophytes’), but, within that clade, their placement is still uncertain. Leptosporangiate ferns are better understood, although deep relationships within this group are still unresolved. Earlier, almost all leptosporangiate ferns were placed in a single family (Polypodiaceae or Dennstaedtiaceae), but these families have been redefined to narrower more natural entities. Conclusions Concluding this paper, a classification is presented based on our current understanding of relationships of fern and lycopod clades. Major changes in our understanding of these families are highlighted, illustrating issues of classification in relation to convergent evolution and false homologies. Problems with the current classification and groups that still need study are pointed out. A summary phylogenetic tree is also presented. A new classification in which Aspleniaceae, Cyatheaceae, Polypodiaceae and Schizaeaceae are expanded in comparison with the most recent classifications is presented, which is a modification of those proposed by Smith et al. (2006, 2008) and Christenhusz et al. (2011). These classifications are now finding a wider acceptance and use, and even though a few amendments are made based on recently published results from molecular analyses, we have aimed for a stable family and generic classification of ferns. PMID:24532607

Active faulting induced by the slip partitioning in the Lesser Antilles arc

NASA Astrophysics Data System (ADS)

Leclerc, Frédérique; Feuillet, Nathalie

2010-05-01

AGUADOMAR marine cruise data acquired 11 years ago allowed us to identified and map two main sets of active faults within the Lesser Antilles arc (Feuillet et al., 2002; 2004). The faults belonging to the first set, such as Morne-Piton in Guadeloupe, bound up to 100km-long and 50km-wide arc-perpendicular graben or half graben that disrupt the fore-arc reef platforms. The faults of the second set form right-stepping en echelon arrays, accommodating left-lateral slip along the inner, volcanic islands. The two fault systems form a sinistral horsetail east of the tip of the left-lateral Puerto Rico fault zone that takes up the trench-parallel component of convergence between the North-American and Caribbean plates west of the Anegada passage. In other words, they together accommodate large-scale slip partitioning along the northeastern arc, consistent with recent GPS measurements (Lopez et al., 2006). These intraplate faults are responsible for a part of the shallow seismicity in the arc and have produce damaging historical earthquakes. Two magnitude 6.3 events occurred in the last 25 years along the inner en echelon faults, the last one on November 21 2004 in Les Saintes in the Guadeloupe archipelago. To better constrain the seismic hazard related to the inner arc faults and image the ruptures and effects on the seafloor of Les Saintes 2004 earthquake, we acquired new marine data between 23 February and 25 March 2009 aboard the French R/V le Suroît during the GWADASEIS cruise. We present here the data (high-resolution 72 channel and very high-resolution chirp 3.5 khz seismic reflection profiles, EM300 multibeam bathymetry, Küllenberg coring and SAR imagery) and the first results. We identified, mapped and characterized in detail several normal to oblique fault systems between Martinique and Saba. They offset the seafloor by several hundred meters and crosscut all active volcanoes, among them Nevis Peak, Soufriere Hills, Soufriere de Guadeloupe and Montagne Pel

Identification of invasive and expansive plant species based on airborne hyperspectral and ALS data

NASA Astrophysics Data System (ADS)

Szporak-Wasilewska, Sylwia; Kuc, Gabriela; Jóźwiak, Jacek; Demarchi, Luca; Chormański, Jarosław; Marcinkowska-Ochtyra, Adriana; Ochtyra, Adrian; Jarocińska, Anna; Sabat, Anita; Zagajewski, Bogdan; Tokarska-Guzik, Barbara; Bzdęga, Katarzyna; Pasierbiński, Andrzej; Fojcik, Barbara; Jędrzejczyk-Korycińska, Monika; Kopeć, Dominik; Wylazłowska, Justyna; Woziwoda, Beata; Michalska-Hejduk, Dorota; Halladin-Dąbrowska, Anna

2017-04-01

. Simultaneously to airborne data acquisitions also botanical surveys were performed covering in total 5680 reference plots for 18 alien invasive and native expansive plant species (1886 in first flight campaign, 1907 in second and 1887 in third). The collected data were used to identify species characteristics such as spectral properties among others (percentage cover, growth stage, discoloration, coexisting species, land use, plant litter). The research includes 10 invasive alien species and 8 native expansive plant species. Amongst plant species selected for the purposes of this study were: Robinia pseudoacacia, Padus serotina, Rumex confertus, Erigeron annuus, Spiraea tomentosa, Solidago spp., Lupinus polyphyllus, Reynoutria spp., Echinocystis lobata and Heracleum spp. as alien invasive species, and Urtica dioica, Filipendula ulmaria, Phragmites australis, Rubus spp, Calamagrostis epigejos, Cirsium arvense, Molinia caerulea, Deschampsia caespitosa as native expansive species. In this study we present the methodology used for identification of invasive alien and expansive native plant species using hyperspectral and airborne laser data with resulting accuracies using different classification methods and exemplary distribution maps. The research within this study will be continued during growing season of the year 2017. Acknowledgements This research has been carried out under the Biostrateg Programme of the Polish National Centre for Research and Development (NCBiR), project No.: DZP/BIOSTRATEG-II/390/2015: The innovative approach supporting monitoring of non-forest Natura 2000 habitats, using remote sensing methods (HabitARS).

Plants as Indicators of Past and Present Zones of Upwelling Soil CO2 at the ZERT Facility

NASA Astrophysics Data System (ADS)

Apple, M. E.; Sharma, B.; Zhou, X.; Shaw, J. A.; Dobeck, L.; Cunnningham, A.; Spangler, L.; ZERT Team

2011-12-01

By their very nature, photosynthetic plants are sensitive and responsive to CO2, which they fix during the Calvin-Benson cycle. Responses of plants to CO2 are valuable tools in the surface detection of upwelling and leaking CO2 from carbon sequestration fields. Plants exposed to upwelling CO2 rapidly exhibit signs of stress such as changes in stomatal conductance, hyperspectral signatures, pigmentation, and viability (Lakkaraju et al. 2010; Male et al. 2010). The Zero Emission Research and Technology (ZERT) site in Bozeman, MT is an experimental facility for surface detection of CO2 where 0.15 ton/day of CO2 was released (7/19- 8/15/2010, and 7/18 - 8/15/2011) from a 100m horizontal injection well, (HIW), 1.5 m underground with deliberate leaks of CO2 at intervals, and from a vertical injector, (VIW), (6/3-6/24/2010). Soil CO2 concentrations reached 16%. Plants at ZERT include Taraxacum officinale (Dandelion), Dactylis glomerata (Orchard Grass), Poa pratensis, (Kentucky Bluegrass), Phleum pratense (Timothy), Bromus japonicus (Japanese Brome), Medicago sativa (Alfalfa) and Cirsium arvense (Canadian Thistle). Dandelion leaves above the zones of upwelling CO2 at the HIW and the VIW changed color from green to reddish-purple (indicative of an increase in anthocyanins) to brown as they senesced within two weeks of CO2 injection. Their increased stomatal conductance along with their extensive surface area combined to make water loss occur quickly following injection of CO2. Xeromorphic grass leaves were not as profoundly affected, although they did exhibit changes in stomatal conductance, accelerated loss of chlorophyll beyond what would normally occur with seasonal senescence, and altered hyperspectral signatures. Within two weeks of CO2 injection at the HIW and the VIW, hot spots formed, which are circular zones of visible leaf senescence that appear at zones of upwelling CO2. The hot spots became more pronounced as the CO2 injection continued, and were detectable

Structural Inventory of Great Basin Geothermal Systems and Definition of Favorable Structural Settings

DOE Data Explorer

Faulds, James E.

2013-12-31

of more than 240 sites. However, we found that many “systems” consisted of little more than a warm or hot well in the central part of a basin. Such “systems” were difficult to evaluate in terms of structural setting in areas lacking in geophysical data. Developed database for structural catalogue in a master spreadsheet. Data components include structural setting, primary fault orientation, presence or absence of Quaternary faulting, reservoir lithology, geothermometry, presence or absence of recent magmatism, and distinguishing blind systems from those that have surface expressions. Reviewed site locations for all 426 geothermal systems– Confirmed and/or relocated spring and geothermal sites based on imagery, maps, and other information for master database. Many systems were mislocated in the original database. In addition, some systems that included several separate springs spread over large areas were divided into two or more distinct systems. Further, all hot wells were assigned names based on their location to facilitate subsequent analyses. We catalogued systems into the following eight major groups, based on the dominant pattern of faulting (Figure 1): - Major normal fault segments (i.e., near displacement maxima). - Fault bends. - Fault terminations or tips. - Step‐overs or relay ramps in normal faults. - Fault intersections. - Accommodation zones (i.e., belts of intermeshing oppositely dipping normal faults), - Displacement transfer zones whereby strike‐slip faults terminate in arrays of normal faults. - Transtensional pull‐aparts. These settings form a hierarchal pattern with respect to fault complexity. - Major normal faults and fault bends are the simplest. - Fault terminations are typically more complex than mid‐segments, as faults commonly break up into multiple strands or horsetail near their ends. - A fault intersection is generally more complex, as it generally contains both multiple fault strands and can include discrete di...

Recent faulting in the Gulf of Santa Catalina: San Diego to Dana Point

USGS Publications Warehouse

Ryan, H.F.; Legg, M.R.; Conrad, J.E.; Sliter, R.W.

2009-01-01

We interpret seismic-reflection profiles to determine the location and offset mode of Quaternary offshore faults beneath the Gulf of Santa Catalina in the inner California Continental Borderland. These faults are primarily northwest-trending, right-lateral, strike-slip faults, and are in the offshore Rose Canyon-Newport-Inglewood, Coronado Bank, Palos Verdes, and San Diego Trough fault zones. In addition we describe a suite of faults imaged at the base of the continental slope between Dana Point and Del Mar, California. Our new interpretations are based on high-resolution, multichannel seismic (MCS), as well as very high resolution Huntec and GeoPulse seismic-reflection profiles collected by the U.S. Geological Survey from 1998 to 2000 and MCS data collected by WesternGeco in 1975 and 1981, which have recently been made publicly available. Between La Jolla and Newport Beach, California, the Rose Canyon and Newport-Inglewood fault zones are multistranded and generally underlie the shelf break. The Rose Canyon fault zone has a more northerly strike; a left bend in the fault zone is required to connect with the Newport-Inglewood fault zone. A prominent active anticline at mid-slope depths (300-400 m) is imaged seaward of where the Rose Canyon fault zone merges with the Newport-Inglewood fault zone. The Coronado Bank fault zone is a steeply dipping, northwest-trending zone consisting of multiple strands that are imaged from south of the U.S.-Mexico border to offshore of San Mateo Point. South of the La Jolla fan valley, the Coronado Bank fault zone is primarily transtensional; this section of the fault zone ends at the La Jolla fan valley in a series of horsetail splays. The northern section of the Coronado Bank fault zone is less well developed. North of the La Jolla fan valley, the Coronado Bank fault zone forms a positive flower structure that can be mapped at least as far north as Oceanside, a distance of ??35 km. However, north of Oceanside, the Coronado Bank

Surficial geology of the lower Comb Wash, San Juan County, Utah

USGS Publications Warehouse

Longpré, Claire I.

2001-01-01

. Most precipitation is monsoonal, convective storms that bring moisture from the Gulf of Mexico beginning in early July and ending by October. Large frontal storms during December and January are responsible for most winter precipitation (Figure 2). The record from U.S. Geological Survey gauging station number 09379000 operated by the BLM from 1959 through 1968 indicates that Comb Wash flows in direct response to precipitation events. Most daily discharge and peak events occur in late July through September, coinciding with high intensity monsoon thunderstorms. Comb Wash supports a variety of vegetation typical of the Great Basin Desert and the northern desert shrub zone as described by Fowler and Koch (1982). On the lower alluvial terraces, bushes and shrubs dominate the vegetation, including: sagebrush (Artemesia tridentata), rabbitbrush (Chrysothamnus nauseosus), fourwing saltbush (Atriplex canescens), winterfat (Eurotia lanata), greasewood (Sarcobatus vermiculatus), and shadscale (Atriplex concertifolia). Juniper trees (Juniperus osteosperma) can be found on the rocky colluvial slopes near Comb Ridge and on the higher terrace near Cedar Mesa. The floodplain contains an abundance of riparian vegetation including cottonwood (Populus fremontii), willow (Salix exigua), and tamarisk (Tamarix ramosissima). Tamarisk is one of 7 non-native species present in the lower Comb Wash watershed. At least seven known species of noxious weeds have invaded the watershed, including Bermuda grass (Cynodon dactylon), field bindweed (Convolvulus avensis), Canada thistle (Cirsium arvense), Russian knapweed (Centaurea repens), tamarisk and camel thorn (Alhagi pseudalhagi). Of these, tamarisk or salt-cedar has most aggressively colonized the southwestern United States, including the San Juan watershed. Graf (1978) estimates that since the late 19th century, tamarisk has spread at a rate of 20 km per year. Tamarisk first appeared in Comb Wash during the mid to early 20th century based on

Pleistocene lake level changes in Western Mongolia

NASA Astrophysics Data System (ADS)

Borodavko, P. S.

2009-04-01

cane sedges and horsetails dominant. The benthic fauna is poor, and only single pecimens of molluscs and amphipods are met. The ichtyofauna is represented by Oreoleuciscus Pewzowi. Previous and modern investigations of these lakes, their morphologies and deposits, allow to specify periods of extension of the lakes and palaeogeographical conditions. Two clear extension periods can be determined in the Mongolian Great Lakes Basin, corresponding to Mid-and Late Pleistocene transgressions. During the Mid-Pleistocene transgression the current Lakes Har-Us Nur, Dorgon Nur, Hara Nur, Airag Nur and Hyargas were integrated to a united lake, with a maximal level at 1265 m. and total water area about 23 158 km2 . The maximal thickness of Mid-Pleistocene lake deposits is 70 m. Late Pleistocene lake sediments are investigated in sections near Dzabhan River and Hyargas Nuur shorelines. They consist of laminated sand, clay and gravel with cryogenic structures at the base and upper part of sections. The mean thickness of Late Pleistocene lake deposits is 20-35 m. The main characteristics of Late Pleistocene lake features are represented by a very bright "lake relief" — obvious steps of shorelines, gravel bands, bars and spits. The specific structure of Late Pleistocene lake cross-sections allows to separate two transgressions within this period. In the first half of the Holocene a minor regression of several meters occurred. Elements of the modern time aeolian relief were still inundated on the north shore of Lake Har-Us Nur. Researches funded by RFBR (Grant 08-05-00037-a) References 1. Geomorfologiya Mongol'skoi Narodnoi Respubliki (Geomorphology of the Mongolian People Republic). M.: Nauka, pp. 135-148. 2. Ozera MNR i ikh mineral'nye resursy (Lakes of MPR and their mineral resources), 1991. Moscow, Nauka, 136 p. 3. Sevastyanov, D.V., Shuvalov, V.F. and Neustrueva, I. Yu. (Eds.), 1994. Limnologiya i paleolimnologiya Mongolii (Limnology and Palaeolimnology of Mongolia). St