Sample records for estimation code pest

  1. Approaches in highly parameterized inversion - PEST++, a Parameter ESTimation code optimized for large environmental models

    USGS Publications Warehouse

    Welter, David E.; Doherty, John E.; Hunt, Randall J.; Muffels, Christopher T.; Tonkin, Matthew J.; Schreuder, Willem A.

    2012-01-01

    An object-oriented parameter estimation code was developed to incorporate benefits of object-oriented programming techniques for solving large parameter estimation modeling problems. The code is written in C++ and is a formulation and expansion of the algorithms included in PEST, a widely used parameter estimation code written in Fortran. The new code is called PEST++ and is designed to lower the barriers of entry for users and developers while providing efficient algorithms that can accommodate large, highly parameterized problems. This effort has focused on (1) implementing the most popular features of PEST in a fashion that is easy for novice or experienced modelers to use and (2) creating a software design that is easy to extend; that is, this effort provides a documented object-oriented framework designed from the ground up to be modular and extensible. In addition, all PEST++ source code and its associated libraries, as well as the general run manager source code, have been integrated in the Microsoft Visual Studio® 2010 integrated development environment. The PEST++ code is designed to provide a foundation for an open-source development environment capable of producing robust and efficient parameter estimation tools for the environmental modeling community into the future.

  2. cloudPEST - A python module for cloud-computing deployment of PEST, a program for parameter estimation

    USGS Publications Warehouse

    Fienen, Michael N.; Kunicki, Thomas C.; Kester, Daniel E.

    2011-01-01

    This report documents cloudPEST-a Python module with functions to facilitate deployment of the model-independent parameter estimation code PEST on a cloud-computing environment. cloudPEST makes use of low-level, freely available command-line tools that interface with the Amazon Elastic Compute Cloud (EC2(TradeMark)) that are unlikely to change dramatically. This report describes the preliminary setup for both Python and EC2 tools and subsequently describes the functions themselves. The code and guidelines have been tested primarily on the Windows(Registered) operating system but are extensible to Linux(Registered).

  3. Approaches in highly parameterized inversion—PEST++ Version 3, a Parameter ESTimation and uncertainty analysis software suite optimized for large environmental models

    USGS Publications Warehouse

    Welter, David E.; White, Jeremy T.; Hunt, Randall J.; Doherty, John E.

    2015-09-18

    The PEST++ Version 3 software suite can be compiled for Microsoft Windows®4 and Linux®5 operating systems; the source code is available in a Microsoft Visual Studio®6 2013 solution; Linux Makefiles are also provided. PEST++ Version 3 continues to build a foundation for an open-source framework capable of producing robust and efficient parameter estimation tools for large environmental models.

  4. iTOUGH2 Universal Optimization Using the PEST Protocol

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Finsterle, S.A.

    2010-07-01

    iTOUGH2 (http://www-esd.lbl.gov/iTOUGH2) is a computer program for parameter estimation, sensitivity analysis, and uncertainty propagation analysis [Finsterle, 2007a, b, c]. iTOUGH2 contains a number of local and global minimization algorithms for automatic calibration of a model against measured data, or for the solution of other, more general optimization problems (see, for example, Finsterle [2005]). A detailed residual and estimation uncertainty analysis is conducted to assess the inversion results. Moreover, iTOUGH2 can be used to perform a formal sensitivity analysis, or to conduct Monte Carlo simulations for the examination for prediction uncertainties. iTOUGH2's capabilities are continually enhanced. As the name implies, iTOUGH2more » is developed for use in conjunction with the TOUGH2 forward simulator for nonisothermal multiphase flow in porous and fractured media [Pruess, 1991]. However, iTOUGH2 provides FORTRAN interfaces for the estimation of user-specified parameters (see subroutine USERPAR) based on user-specified observations (see subroutine USEROBS). These user interfaces can be invoked to add new parameter or observation types to the standard set provided in iTOUGH2. They can also be linked to non-TOUGH2 models, i.e., iTOUGH2 can be used as a universal optimization code, similar to other model-independent, nonlinear parameter estimation packages such as PEST [Doherty, 2008] or UCODE [Poeter and Hill, 1998]. However, to make iTOUGH2's optimization capabilities available for use with an external code, the user is required to write some FORTRAN code that provides the link between the iTOUGH2 parameter vector and the input parameters of the external code, and between the output variables of the external code and the iTOUGH2 observation vector. While allowing for maximum flexibility, the coding requirement of this approach limits its applicability to those users with FORTRAN coding knowledge. To make iTOUGH2 capabilities accessible to many application models, the PEST protocol [Doherty, 2007] has been implemented into iTOUGH2. This protocol enables communication between the application (which can be a single 'black-box' executable or a script or batch file that calls multiple codes) and iTOUGH2. The concept requires that for the application model: (1) Input is provided on one or more ASCII text input files; (2) Output is returned to one or more ASCII text output files; (3) The model is run using a system command (executable or script/batch file); and (4) The model runs to completion without any user intervention. For each forward run invoked by iTOUGH2, select parameters cited within the application model input files are then overwritten with values provided by iTOUGH2, and select variables cited within the output files are extracted and returned to iTOUGH2. It should be noted that the core of iTOUGH2, i.e., its optimization routines and related analysis tools, remains unchanged; it is only the communication format between input parameters, the application model, and output variables that are borrowed from PEST. The interface routines have been provided by Doherty [2007]. The iTOUGH2-PEST architecture is shown in Figure 1. This manual contains installation instructions for the iTOUGH2-PEST module, and describes the PEST protocol as well as the input formats needed in iTOUGH2. Examples are provided that demonstrate the use of model-independent optimization and analysis using iTOUGH2.« less

  5. A post-processor for the PEST code

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Priesche, S.; Manickam, J.; Johnson, J.L.

    1992-01-01

    A new post-processor has been developed for use with output from the PEST tokamak stability code. It allows us to use quantities calculated by PEST and take better advantage of the physical picture of the plasma instability which they can provide. This will improve comparison with experimentally measured quantities as well as facilitate understanding of theoretical studies.

  6. Tearing Mode Stability of Evolving Toroidal Equilibria

    NASA Astrophysics Data System (ADS)

    Pletzer, A.; McCune, D.; Manickam, J.; Jardin, S. C.

    2000-10-01

    There are a number of toroidal equilibrium (such as JSOLVER, ESC, EFIT, and VMEC) and transport codes (such as TRANSP, BALDUR, and TSC) in our community that utilize differing equilibrium representations. There are also many heating and current drive (LSC and TORRAY), and stability (PEST1-3, GATO, NOVA, MARS, DCON, M3D) codes that require this equilibrium information. In an effort to provide seamless compatibility between the codes that produce and need these equilibria, we have developed two Fortran 90 modules, MEQ and XPLASMA, that serve as common interfaces between these two classes of codes. XPLASMA provides a common equilibrium representation for the heating and current drive applications while MEQ provides common equilibrium and associated metric information needed by MHD stability codes. We illustrate the utility of this approach by presenting results of PEST-3 tearing stability calculations of an NSTX discharge performed on profiles provided by the TRANSP code. Using the MEQ module, the TRANSP equilibrium data are stored in a Fortran 90 derived type and passed to PEST3 as a subroutine argument. All calculations are performed on the fly, as the profiles evolve.

  7. Python-Based Applications for Hydrogeological Modeling

    NASA Astrophysics Data System (ADS)

    Khambhammettu, P.

    2013-12-01

    Python is a general-purpose, high-level programming language whose design philosophy emphasizes code readability. Add-on packages supporting fast array computation (numpy), plotting (matplotlib), scientific /mathematical Functions (scipy), have resulted in a powerful ecosystem for scientists interested in exploratory data analysis, high-performance computing and data visualization. Three examples are provided to demonstrate the applicability of the Python environment in hydrogeological applications. Python programs were used to model an aquifer test and estimate aquifer parameters at a Superfund site. The aquifer test conducted at a Groundwater Circulation Well was modeled with the Python/FORTRAN-based TTIM Analytic Element Code. The aquifer parameters were estimated with PEST such that a good match was produced between the simulated and observed drawdowns. Python scripts were written to interface with PEST and visualize the results. A convolution-based approach was used to estimate source concentration histories based on observed concentrations at receptor locations. Unit Response Functions (URFs) that relate the receptor concentrations to a unit release at the source were derived with the ATRANS code. The impact of any releases at the source could then be estimated by convolving the source release history with the URFs. Python scripts were written to compute and visualize receptor concentrations for user-specified source histories. The framework provided a simple and elegant way to test various hypotheses about the site. A Python/FORTRAN-based program TYPECURVEGRID-Py was developed to compute and visualize groundwater elevations and drawdown through time in response to a regional uniform hydraulic gradient and the influence of pumping wells using either the Theis solution for a fully-confined aquifer or the Hantush-Jacob solution for a leaky confined aquifer. The program supports an arbitrary number of wells that can operate according to arbitrary schedules. The python wrapper invokes the underlying FORTRAN layer to compute transient groundwater elevations and processes this information to create time-series and 2D plots.

  8. Inversion of Attributes and Full Waveforms of Ground Penetrating Radar Data Using PEST

    NASA Astrophysics Data System (ADS)

    Jazayeri, S.; Kruse, S.; Esmaeili, S.

    2015-12-01

    We seek to establish a method, based on freely available software, for inverting GPR signals for the underlying physical properties (electrical permittivity, magnetic permeability, target geometries). Such a procedure should be useful for classroom instruction and for analyzing surface GPR surveys over simple targets. We explore the applicability of the PEST parameter estimation software package for GPR inversion (www.pesthomepage.org). PEST is designed to invert data sets with large numbers of parameters, and offers a variety of inversion methods. Although primarily used in hydrogeology, the code has been applied to a wide variety of physical problems. The PEST code requires forward model input; the forward model of the GPR signal is done with the GPRMax package (www.gprmax.com). The problem of extracting the physical characteristics of a subsurface anomaly from the GPR data is highly nonlinear. For synthetic models of simple targets in homogeneous backgrounds, we find PEST's nonlinear Gauss-Marquardt-Levenberg algorithm is preferred. This method requires an initial model, for which the weighted differences between model-generated data and those of the "true" synthetic model (the objective function) are calculated. In order to do this, the Jacobian matrix and the derivatives of the observation data in respect to the model parameters are computed using a finite differences method. Next, the iterative process of building new models by updating the initial values starts in order to minimize the objective function. Another measure of the goodness of the final acceptable model is the correlation coefficient which is calculated based on the method of Cooley and Naff. An accepted final model satisfies both of these conditions. Models to date show that physical properties of simple isolated targets against homogeneous backgrounds can be obtained from multiple traces from common-offset surface surveys. Ongoing work examines the inversion capabilities with more complex target geometries and heterogeneous soils.

  9. Parameter estimation supplement to the Mission Analysis Evaluation and Space Trajectory Operations program (MAESTRO)

    NASA Technical Reports Server (NTRS)

    Bjorkman, W. S.; Uphoff, C. W.

    1973-01-01

    This Parameter Estimation Supplement describes the PEST computer program and gives instructions for its use in determination of lunar gravitation field coefficients. PEST was developed for use in the RAE-B lunar orbiting mission as a means of lunar field recovery. The observations processed by PEST are short-arc osculating orbital elements. These observations are the end product of an orbit determination process obtained with another program. PEST's end product it a set of harmonic coefficients to be used in long-term prediction of the lunar orbit. PEST employs some novel techniques in its estimation process, notably a square batch estimator and linear variational equations in the orbital elements (both osculating and mean) for measurement sensitivities. The program's capabilities are described, and operating instructions and input/output examples are given. PEST utilizes MAESTRO routines for its trajectory propagation. PEST's program structure and subroutines which are not common to MAESTRO are described. Some of the theoretical background information for the estimation process, and a derivation of linear variational equations for the Method 7 elements are included.

  10. Optimization of monitoring networks based on uncertainty quantification of model predictions of contaminant transport

    NASA Astrophysics Data System (ADS)

    Vesselinov, V. V.; Harp, D.

    2010-12-01

    The process of decision making to protect groundwater resources requires a detailed estimation of uncertainties in model predictions. Various uncertainties associated with modeling a natural system, such as: (1) measurement and computational errors; (2) uncertainties in the conceptual model and model-parameter estimates; (3) simplifications in model setup and numerical representation of governing processes, contribute to the uncertainties in the model predictions. Due to this combination of factors, the sources of predictive uncertainties are generally difficult to quantify individually. Decision support related to optimal design of monitoring networks requires (1) detailed analyses of existing uncertainties related to model predictions of groundwater flow and contaminant transport, (2) optimization of the proposed monitoring network locations in terms of their efficiency to detect contaminants and provide early warning. We apply existing and newly-proposed methods to quantify predictive uncertainties and to optimize well locations. An important aspect of the analysis is the application of newly-developed optimization technique based on coupling of Particle Swarm and Levenberg-Marquardt optimization methods which proved to be robust and computationally efficient. These techniques and algorithms are bundled in a software package called MADS. MADS (Model Analyses for Decision Support) is an object-oriented code that is capable of performing various types of model analyses and supporting model-based decision making. The code can be executed under different computational modes, which include (1) sensitivity analyses (global and local), (2) Monte Carlo analysis, (3) model calibration, (4) parameter estimation, (5) uncertainty quantification, and (6) model selection. The code can be externally coupled with any existing model simulator through integrated modules that read/write input and output files using a set of template and instruction files (consistent with the PEST I/O protocol). MADS can also be internally coupled with a series of built-in analytical simulators. MADS provides functionality to work directly with existing control files developed for the code PEST (Doherty 2009). To perform the computational modes mentioned above, the code utilizes (1) advanced Latin-Hypercube sampling techniques (including Improved Distributed Sampling), (2) various gradient-based Levenberg-Marquardt optimization methods, (3) advanced global optimization methods (including Particle Swarm Optimization), and (4) a selection of alternative objective functions. The code has been successfully applied to perform various model analyses related to environmental management of real contamination sites. Examples include source identification problems, quantification of uncertainty, model calibration, and optimization of monitoring networks. The methodology and software codes are demonstrated using synthetic and real case studies where monitoring networks are optimized taking into account the uncertainty in model predictions of contaminant transport.

  11. 75 FR 11171 - Notice of Filing of Several Pesticide Petitions for Residues of Pesticide Chemicals in or on...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-03-10

    ... limited to: Crop production (NAICS code 111). Animal production (NAICS code 112). Food manufacturing (NAICS code 311). Pesticide manufacturing (NAICS code 32532). This listing is not intended to be... Environmental protection, Agricultural commodities, Feed additives, Food additives, Pesticides and pests...

  12. 75 FR 60452 - Notice of Filing of Several Pesticide Petitions for Residues of Pesticide Chemicals in or on...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-09-30

    ... limited to: Crop production (NAICS code 111). Animal production (NAICS code 112). Food manufacturing (NAICS code 311). Pesticide manufacturing (NAICS code 32532). This listing is not intended to be... commodities, Feed additives, Food additives, Pesticides and pests, Reporting and recordkeeping requirements...

  13. 75 FR 17715 - Notice of Receipt of a Pesticide Petition Filed for Temporary Tolerance Exemption for Residues of...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-04-07

    ...: Crop production (NAICS code 111). Animal production (NAICS code 112). Food manufacturing (NAICS code 311). Pesticide manufacturing (NAICS code 32532). This listing is not intended to be exhaustive, but..., Agricultural commodities, Feed additives, Food additives, Pesticides and pests, Reporting and recordkeeping...

  14. 76 FR 36479 - Receipt of a Pesticide Petition Filed for Residues of Pesticide Chemicals in or on Various...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-06-22

    ... limited to: Crop production (NAICS code 111). Animal production (NAICS code 112). Food manufacturing (NAICS code 311). Pesticide manufacturing (NAICS code 32532). This listing is not intended to be... commodities, Feed additives, Food additives, Pesticides and pests, Reporting and recordkeeping requirements...

  15. Multiscale approach to pest insect monitoring: Random walks, pattern formation, synchronization, and networks

    NASA Astrophysics Data System (ADS)

    Petrovskii, Sergei; Petrovskaya, Natalia; Bearup, Daniel

    2014-09-01

    Pest insects pose a significant threat to food production worldwide resulting in annual losses worth hundreds of billions of dollars. Pest control attempts to prevent pest outbreaks that could otherwise destroy a sward. It is good practice in integrated pest management to recommend control actions (usually pesticides application) only when the pest density exceeds a certain threshold. Accurate estimation of pest population density in ecosystems, especially in agro-ecosystems, is therefore very important, and this is the overall goal of the pest insect monitoring. However, this is a complex and challenging task; providing accurate information about pest abundance is hardly possible without taking into account the complexity of ecosystems' dynamics, in particular, the existence of multiple scales. In the case of pest insects, monitoring has three different spatial scales, each of them having their own scale-specific goal and their own approaches to data collection and interpretation. In this paper, we review recent progress in mathematical models and methods applied at each of these scales and show how it helps to improve the accuracy and robustness of pest population density estimation.

  16. An indirect approach to assess the pests on sorghum by remote sensing

    NASA Astrophysics Data System (ADS)

    Singh, D.; Sao, R.

    In today's world of advanced technology various techniques are being used to study ecological parameter and gathering data for agricultural benefits. The major aspects of remote sensing are timely estimates of agriculture crop yield, prediction of pest etc. The damage caused by the pest to crop is well known. Therefore, in this paper, an attempt has to be made to estimate the number of pests on sorghum by remote sensing technique. The studies were made on crop Sorghum (Meethi Sudan) that is a forage variety and the pest observed is a species of grasshopper. The beds of crop sorghum were specially prepared for pests as well as microwave scattering measurements. In first phase of study, dependence of number of pests on sorghum plant parameters (i.e., crop covered moist soil (SM), plant height (PH), leaf area index (LAI), percentage Biomass (BIO), Total chlorophyll (TC)) have been observed by the regression analyses and it was found that pests were more dependent on sorghum chlorophyll than other plant parameters, while climatic conditions were taken as constant. A linear relationship has been obtained between number of pests and TC with quite significant values of coefficient of determination (r^2=0.86). These crop parameters are easily assessable through microwave remote sensing so they can form the basis for prediction of pest remotely. In second phase of study, several observations were carried out for various growth stages of sorghum using bistatic scatterometer for both like polarizations (i.e., HH- and VV-) and different incidence angles at X-band (9.5 GHz). Linear, and multiple regression analysis were carried out to check dependence of scattering coefficient on these crop parameters and it was noticed that scattering coefficient was more dependent on sorghum TC than other plant parameters at X-band. A negative correlation has been obtained between TC and scattering coefficient with quite good values of r^2 (0.82). VV-pol gives better results than HH-pol and incidence angle should be more than 40 degree for both like pols for assessing the sorghum TC at X-band. The TC assessed by the microwave measurements was helpful to estimate the number of pests on sorghum. Combining both phase of study, number of pests was estimated and a quite good agreement (r^2=0.76) was found between observed and estimated pests.

  17. 78 FR 56185 - Receipt of Several Pesticide Petitions Filed for Residues of Pesticide Chemicals in or on Various...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2013-09-12

    ... (NAICS code 111). Animal production (NAICS code 112). Food manufacturing (NAICS code 311). Pesticide manufacturing (NAICS code 32532). If you have any questions regarding the applicability of this action to a... commodities, Feed additives, Food additives, Pesticides and pests, Reporting and recordkeeping requirements...

  18. 75 FR 48667 - Notice of Receipt of Several Pesticide Petitions Filed for Residues of Pesticide Chemicals in or...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-08-11

    ... (NAICS code 111). Animal production (NAICS code 112). Food manufacturing (NAICS code 311). Pesticide manufacturing (NAICS code 32532). This listing is not intended to be exhaustive, but rather provides a guide for..., Agricultural commodities, Feed additives, Food additives, Pesticides and pests, Reporting and recordkeeping...

  19. 76 FR 3885 - Notice of Receipt of a Pesticide Petition Filed for Residues of Pesticide Chemicals in or on...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-01-21

    ... (NAICS code 111). Animal production (NAICS code 112). Food manufacturing (NAICS code 311). Pesticide manufacturing (NAICS code 32532). This listing is not intended to be exhaustive, but rather provides a guide for... commodities, Feed additives, Food additives, Pesticides and pests, Reporting and recordkeeping requirements...

  20. 75 FR 53690 - Notice of Receipt of Pesticide Petition Filed for Residues of Potassium Peroxymonosulfate in or...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-09-01

    ... (NAICS code 111). Animal production (NAICS code 112). Food manufacturing (NAICS code 311). Pesticide manufacturing (NAICS code 32532). This listing is not intended to be exhaustive, but rather provides a guide for... Environmental protection, Agricultural commodities, Feed additives, Food additives, Pesticides and pests...

  1. 75 FR 1773 - Notice of Receipt of a Pesticide Petition Filed for Residues of Polymeric Polyhydroxy Acid in or...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-01-13

    ... (NAICS code 111). Animal production (NAICS code 112). Food manufacturing (NAICS code 311). Pesticide manufacturing (NAICS code 32532). This listing is not intended to be exhaustive, but rather provides a guide for... Environmental protection, Agricultural commodities, Feed additives, Food additives, Pesticides and pests...

  2. The complete mitochondrial genome of Anoplocnemis curvipes F. (Coreinea, Coreidae, Heteroptera), a pest of fresh cowpea pods

    USDA-ARS?s Scientific Manuscript database

    The complete 16,345-bp mitochondrial genome of the agriculturally-destructive pod sucking pest, the giant coreid bug, Anoplocnemis curvipes (Hemiptera: Coreidae), was assembled from paired end next generation sequencing reads. The A. curvipes mitochondrial genome consists of 13 protein coding genes...

  3. The mitochondrial genome of Elodia flavipalpis Aldrich (Diptera: Tachinidae) and the evolutionary timescale of Tachinid flies.

    PubMed

    Zhao, Zhe; Su, Tian-Juan; Chesters, Douglas; Wang, Shi-di; Ho, Simon Y W; Zhu, Chao-Dong; Chen, Xiao-Lin; Zhang, Chun-Tian

    2013-01-01

    Tachinid flies are natural enemies of many lepidopteran and coleopteran pests of forests, crops, and fruit trees. In order to address the lack of genetic data in this economically important group, we sequenced the complete mitochondrial genome of the Palaearctic tachinid fly Elodia flavipalpis Aldrich, 1933. Usually found in Northern China and Japan, this species is one of the primary natural enemies of the leaf-roller moths (Tortricidae), which are major pests of various fruit trees. The 14,932-bp mitochondrial genome was typical of Diptera, with 13 protein-coding genes, 22 tRNA genes, and 2 rRNA genes. However, its control region is only 105 bp in length, which is the shortest found so far in flies. In order to estimate dipteran evolutionary relationships, we conducted a phylogenetic analysis of 58 mitochondrial genomes from 23 families. Maximum-likelihood and Bayesian methods supported the monophyly of both Tachinidae and superfamily Oestroidea. Within the subsection Calyptratae, Muscidae was inferred as the sister group to Oestroidea. Within Oestroidea, Calliphoridae and Sarcophagidae formed a sister clade to Oestridae and Tachinidae. Using a Bayesian relaxed clock calibrated with fossil data, we estimated that Tachinidae originated in the middle Eocene.

  4. The Mitochondrial Genome of Elodia flavipalpis Aldrich (Diptera: Tachinidae) and the Evolutionary Timescale of Tachinid Flies

    PubMed Central

    Zhao, Zhe; Su, Tian-juan; Chesters, Douglas; Wang, Shi-di; Ho, Simon Y. W.; Zhu, Chao-dong; Chen, Xiao-lin; Zhang, Chun-tian

    2013-01-01

    Tachinid flies are natural enemies of many lepidopteran and coleopteran pests of forests, crops, and fruit trees. In order to address the lack of genetic data in this economically important group, we sequenced the complete mitochondrial genome of the Palaearctic tachinid fly Elodia flavipalpis Aldrich, 1933. Usually found in Northern China and Japan, this species is one of the primary natural enemies of the leaf-roller moths (Tortricidae), which are major pests of various fruit trees. The 14,932-bp mitochondrial genome was typical of Diptera, with 13 protein-coding genes, 22 tRNA genes, and 2 rRNA genes. However, its control region is only 105 bp in length, which is the shortest found so far in flies. In order to estimate dipteran evolutionary relationships, we conducted a phylogenetic analysis of 58 mitochondrial genomes from 23 families. Maximum-likelihood and Bayesian methods supported the monophyly of both Tachinidae and superfamily Oestroidea. Within the subsection Calyptratae, Muscidae was inferred as the sister group to Oestroidea. Within Oestroidea, Calliphoridae and Sarcophagidae formed a sister clade to Oestridae and Tachinidae. Using a Bayesian relaxed clock calibrated with fossil data, we estimated that Tachinidae originated in the middle Eocene. PMID:23626734

  5. Classifying the Sizes of Explosive Eruptions using Tephra Deposits: The Advantages of a Numerical Inversion Approach

    NASA Astrophysics Data System (ADS)

    Connor, C.; Connor, L.; White, J.

    2015-12-01

    Explosive volcanic eruptions are often classified by deposit mass and eruption column height. How well are these eruption parameters determined in older deposits, and how well can we reduce uncertainty using robust numerical and statistical methods? We describe an efficient and effective inversion and uncertainty quantification approach for estimating eruption parameters given a dataset of tephra deposit thickness and granulometry. The inversion and uncertainty quantification is implemented using the open-source PEST++ code. Inversion with PEST++ can be used with a variety of forward models and here is applied using Tephra2, a code that simulates advective and dispersive tephra transport and deposition. The Levenburg-Marquardt algorithm is combined with formal Tikhonov and subspace regularization to invert eruption parameters; a linear equation for conditional uncertainty propagation is used to estimate posterior parameter uncertainty. Both the inversion and uncertainty analysis support simultaneous analysis of the full eruption and wind-field parameterization. The combined inversion/uncertainty-quantification approach is applied to the 1992 eruption of Cerro Negro (Nicaragua), the 2011 Kirishima-Shinmoedake (Japan), and the 1913 Colima (Mexico) eruptions. These examples show that although eruption mass uncertainty is reduced by inversion against tephra isomass data, considerable uncertainty remains for many eruption and wind-field parameters, such as eruption column height. Supplementing the inversion dataset with tephra granulometry data is shown to further reduce the uncertainty of most eruption and wind-field parameters. We think the use of such robust models provides a better understanding of uncertainty in eruption parameters, and hence eruption classification, than is possible with more qualitative methods that are widely used.

  6. Multiscale approach to pest insect monitoring: random walks, pattern formation, synchronization, and networks.

    PubMed

    Petrovskii, Sergei; Petrovskaya, Natalia; Bearup, Daniel

    2014-09-01

    Pest insects pose a significant threat to food production worldwide resulting in annual losses worth hundreds of billions of dollars. Pest control attempts to prevent pest outbreaks that could otherwise destroy a sward. It is good practice in integrated pest management to recommend control actions (usually pesticides application) only when the pest density exceeds a certain threshold. Accurate estimation of pest population density in ecosystems, especially in agro-ecosystems, is therefore very important, and this is the overall goal of the pest insect monitoring. However, this is a complex and challenging task; providing accurate information about pest abundance is hardly possible without taking into account the complexity of ecosystems' dynamics, in particular, the existence of multiple scales. In the case of pest insects, monitoring has three different spatial scales, each of them having their own scale-specific goal and their own approaches to data collection and interpretation. In this paper, we review recent progress in mathematical models and methods applied at each of these scales and show how it helps to improve the accuracy and robustness of pest population density estimation. Copyright © 2014 Elsevier B.V. All rights reserved.

  7. Estimating Cone and Seed Production and Monitoring Pest Damage in Southern Pine Seed Orchards

    Treesearch

    Carl W. Fatzinger; H. David Muse; Thomas Miller; Helen T. Bhattacharyya

    1988-01-01

    Field sampling procedures and computer programs are described for monitoring seed production and pest damage in southern pine seed orchards. The system estimates total orchard yields of female strobili and seeds, quantifies pest damage, determines times of year when losses occur, and produces life tables for female strobili. An example is included to illustrate the...

  8. A Practical Guide to Calibration of a GSSHA Hydrologic Model Using ERDC Automated Model Calibration Software - Effective and Efficient Stochastic Global Optimization

    DTIC Science & Technology

    2012-02-01

    parameter estimation method, but rather to carefully describe how to use the ERDC software implementation of MLSL that accommodates the PEST model...model independent LM method based parameter estimation software PEST (Doherty, 2004, 2007a, 2007b), which quantifies model to measure- ment misfit...et al. (2011) focused on one drawback associated with LM-based model independent parameter estimation as implemented in PEST ; viz., that it requires

  9. 77 FR 8755 - Receipt of a Pesticide Petition Filed for Temporary Tolerance Exemption for Residues of...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2012-02-15

    ... manufacturing (NAICS code 311). Pesticide manufacturing (NAICS code 32532). This listing is not intended to be... Environmental protection, Agricultural commodities, Feed additives, Food additives, Pesticides and pests...

  10. 76 FR 2110 - Notice of Receipt of a Pesticide Petition Filed for Residues of Pesticide Chemicals in or on...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-01-12

    ...). Animal production (NAICS code 112). Food manufacturing (NAICS code 311). Pesticide manufacturing (NAICS... Environmental protection, Agricultural commodities, Feed additives, Food additives, Pesticides and pests...

  11. Solving iTOUGH2 simulation and optimization problems using the PEST protocol

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Finsterle, S.A.; Zhang, Y.

    2011-02-01

    The PEST protocol has been implemented into the iTOUGH2 code, allowing the user to link any simulation program (with ASCII-based inputs and outputs) to iTOUGH2's sensitivity analysis, inverse modeling, and uncertainty quantification capabilities. These application models can be pre- or post-processors of the TOUGH2 non-isothermal multiphase flow and transport simulator, or programs that are unrelated to the TOUGH suite of codes. PEST-style template and instruction files are used, respectively, to pass input parameters updated by the iTOUGH2 optimization routines to the model, and to retrieve the model-calculated values that correspond to observable variables. We summarize the iTOUGH2 capabilities and demonstratemore » the flexibility added by the PEST protocol for the solution of a variety of simulation-optimization problems. In particular, the combination of loosely coupled and tightly integrated simulation and optimization routines provides both the flexibility and control needed to solve challenging inversion problems for the analysis of multiphase subsurface flow and transport systems.« less

  12. 75 FR 80489 - Notice of Receipt of Several Pesticide Petitions Filed for Residues of Pesticide Chemicals in or...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-12-22

    ... production (NAICS code 112). Food manufacturing (NAICS code 311). Pesticide manufacturing (NAICS code [email protected] . List of Subjects Environmental protection, Agricultural commodities, Feed additives, Food additives, Pesticides and pests, Reporting and recordkeeping requirements. Dated: December 9, 2010. Lois...

  13. FRAMES-2.0 Software System: Frames 2.0 Pest Integration (F2PEST)

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Castleton, Karl J.; Meyer, Philip D.

    2009-06-17

    The implementation of the FRAMES 2.0 F2PEST module is described, including requirements, design, and specifications of the software. This module integrates the PEST parameter estimation software within the FRAMES 2.0 environmental modeling framework. A test case is presented.

  14. 76 FR 82238 - Receipt of Several Pesticide Petitions Filed for Residues of Pesticide Chemicals in or on Various...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-12-30

    ... manufacturing (NAICS code 311). Pesticide manufacturing (NAICS code 32532). This listing is not intended to be... Environmental protection, Agricultural commodities, Feed additives, Food additives, Pesticides and pests...

  15. 77 FR 63782 - Receipt of a Pesticide Petition Filed for Residues of Pesticide Chemicals in or on a Commodity

    Federal Register 2010, 2011, 2012, 2013, 2014

    2012-10-17

    ...). Food manufacturing (NAICS code 311). Pesticide manufacturing (NAICS code 32532). B. What should I..., Feed additives, Food additives, Pesticides and pests, Reporting and recordkeeping requirements. Dated...

  16. 77 FR 59576 - Receipt of a Pesticide Petition Filed for Residues of Pesticide Chemicals in or on Various...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2012-09-28

    ...). Food manufacturing (NAICS code 311). Pesticide manufacturing (NAICS code 32532). B. What should I... protection, Agricultural commodities, Feed additives, Food additives, Pesticides and pests, Reporting and...

  17. Complete Mitochondrial Genome Sequence of Aethina tumida (Coleoptera: Nitidulidae), a Beekeeping Pest.

    PubMed

    Duquesne, Véronique; Delcont, Aurélie; Huleux, Anthéa; Beven, Véronique; Touzain, Fabrice; Ribière-Chabert, Magali

    2017-11-02

    We report here the full mitochondrial genome sequence of Aethina tumida , a Nitidulidae species beetle, that is a pest of bee hives. The obtained sequence is 16,576 bp in length and contains 13 protein-coding genes, 2 rRNA genes, and 22 tRNAs. Copyright © 2017 Duquesne et al.

  18. 78 FR 43115 - Receipt of Several Pesticide Petitions Filed for Residues of Pesticide Chemicals in or on Various...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2013-07-19

    ...]Animal production (NAICS code 112). [emsp14]Food manufacturing (NAICS code 311). [emsp14]Pesticide manufacturing (NAICS code 32532). If you have any questions regarding the applicability of this action to a... protection, Agricultural commodities, Feed additives, Food additives, Pesticides and pests, Reporting and...

  19. Sampling methods to detect and estimate populations of Tyrophagus putrescentiae (Schrank) (Sarcoptiformes: Acaridae) infesting dry-cured hams

    USDA-ARS?s Scientific Manuscript database

    Spatial and temporal dynamics of pest populations is an important aspect of effective pest management. However, absolute sampling of some pest populations such as the ham mite, Tyrophagus putrescentiae (Schrank) (Sarcoptiformes: Acaridae), a serious pest of dry-cured ham, can be difficult. Sampling ...

  20. Application of an automatic approach to calibrate the NEMURO nutrient-phytoplankton-zooplankton food web model in the Oyashio region

    NASA Astrophysics Data System (ADS)

    Ito, Shin-ichi; Yoshie, Naoki; Okunishi, Takeshi; Ono, Tsuneo; Okazaki, Yuji; Kuwata, Akira; Hashioka, Taketo; Rose, Kenneth A.; Megrey, Bernard A.; Kishi, Michio J.; Nakamachi, Miwa; Shimizu, Yugo; Kakehi, Shigeho; Saito, Hiroaki; Takahashi, Kazutaka; Tadokoro, Kazuaki; Kusaka, Akira; Kasai, Hiromi

    2010-10-01

    The Oyashio region in the western North Pacific supports high biological productivity and has been well monitored. We applied the NEMURO (North Pacific Ecosystem Model for Understanding Regional Oceanography) model to simulate the nutrients, phytoplankton, and zooplankton dynamics. Determination of parameters values is very important, yet ad hoc calibration methods are often used. We used the automatic calibration software PEST (model-independent Parameter ESTimation), which has been used previously with NEMURO but in a system without ontogenetic vertical migration of the large zooplankton functional group. Determining the performance of PEST with vertical migration, and obtaining a set of realistic parameter values for the Oyashio, will likely be useful in future applications of NEMURO. Five identical twin simulation experiments were performed with the one-box version of NEMURO. The experiments differed in whether monthly snapshot or averaged state variables were used, in whether state variables were model functional groups or were aggregated (total phytoplankton, small plus large zooplankton), and in whether vertical migration of large zooplankton was included or not. We then applied NEMURO to monthly climatological field data covering 1 year for the Oyashio, and compared model fits and parameter values between PEST-determined estimates and values used in previous applications to the Oyashio region that relied on ad hoc calibration. We substituted the PEST and ad hoc calibrated parameter values into a 3-D version of NEMURO for the western North Pacific, and compared the two sets of spatial maps of chlorophyll- a with satellite-derived data. The identical twin experiments demonstrated that PEST could recover the known model parameter values when vertical migration was included, and that over-fitting can occur as a result of slight differences in the values of the state variables. PEST recovered known parameter values when using monthly snapshots of aggregated state variables, but estimated a different set of parameters with monthly averaged values. Both sets of parameters resulted in good fits of the model to the simulated data. Disaggregating the variables provided to PEST into functional groups did not solve the over-fitting problem, and including vertical migration seemed to amplify the problem. When we used the climatological field data, simulated values with PEST-estimated parameters were closer to these field data than with the previously determined ad hoc set of parameter values. When these same PEST and ad hoc sets of parameter values were substituted into 3-D-NEMURO (without vertical migration), the PEST-estimated parameter values generated spatial maps that were similar to the satellite data for the Kuroshio Extension during January and March and for the subarctic ocean from May to November. With non-linear problems, such as vertical migration, PEST should be used with caution because parameter estimates can be sensitive to how the data are prepared and to the values used for the searching parameters of PEST. We recommend the usage of PEST, or other parameter optimization methods, to generate first-order parameter estimates for simulating specific systems and for insertion into 2-D and 3-D models. The parameter estimates that are generated are useful, and the inconsistencies between simulated values and the available field data provide valuable information on model behavior and the dynamics of the ecosystem.

  1. Development of FWIGPR, an open-source package for full-waveform inversion of common-offset GPR data

    NASA Astrophysics Data System (ADS)

    Jazayeri, S.; Kruse, S.

    2017-12-01

    We introduce a package for full-waveform inversion (FWI) of Ground Penetrating Radar (GPR) data based on a combination of open-source programs. The FWI requires a good starting model, based on direct knowledge of field conditions or on traditional ray-based inversion methods. With a good starting model, the FWI can improve resolution of selected subsurface features. The package will be made available for general use in educational and research activities. The FWIGPR package consists of four main components: 3D to 2D data conversion, source wavelet estimation, forward modeling, and inversion. (These four components additionally require the development, by the user, of a good starting model.) A major challenge with GPR data is the unknown form of the waveform emitted by the transmitter held close to the ground surface. We apply a blind deconvolution method to estimate the source wavelet, based on a sparsity assumption about the reflectivity series of the subsurface model (Gholami and Sacchi 2012). The estimated wavelet is deconvolved from the data and the sparsest reflectivity series with fewest reflectors. The gprMax code (www.gprmax.com) is used as the forward modeling tool and the PEST parameter estimation package (www.pesthomepage.com) for the inversion. To reduce computation time, the field data are converted to an effective 2D equivalent, and the gprMax code can be run in 2D mode. In the first step, the user must create a good starting model of the data, presumably using ray-based methods. This estimated model will be introduced to the FWI process as an initial model. Next, the 3D data is converted to 2D, then the user estimates the source wavelet that best fits the observed data by sparsity assumption of the earth's response. Last, PEST runs gprMax with the initial model and calculates the misfit between the synthetic and observed data, and using an iterative algorithm calling gprMax several times ineach iteration, finds successive models that better fit the data. To gauge whether the iterative process has arrived at a local or global minima, the process can be repeated with a range of starting models. Tests have shown that this package can successfully improve estimates of selected subsurface model parameters for simple synthetic and real data. Ongoing research will focus on FWI of more complex scenarios.

  2. New technology for using meteorological information in forest insect pest forecast and warning systems.

    PubMed

    Qin, Jiang-Lin; Yang, Xiu-Hao; Yang, Zhong-Wu; Luo, Ji-Tong; Lei, Xiu-Feng

    2017-12-01

    Near surface air temperature and rainfall are major weather factors affecting forest insect dynamics. The recent developments in remote sensing retrieval and geographic information system spatial analysis techniques enable the utilization of weather factors to significantly enhance forest pest forecasting and warning systems. The current study focused on building forest pest digital data structures as a platform of correlation analysis between weather conditions and forest pest dynamics for better pest forecasting and warning systems using the new technologies. The study dataset contained 3 353 425 small polygons with 174 defined attributes covering 95 counties of Guangxi province of China currently registering 292 forest pest species. Field data acquisition and information transfer systems were established with four software licences that provided 15-fold improvement compared to the systems currently used in China. Nine technical specifications were established including codes of forest districts, pest species and host tree species, and standard practices of forest pest monitoring and information management. Attributes can easily be searched using ArcGIS9.3 and/or the free QGIS2.16 software. Small polygons with pest relevant attributes are a new tool of precision farming and detailed forest insect pest management that are technologically advanced. © 2017 Society of Chemical Industry. © 2017 Society of Chemical Industry.

  3. Approaches in highly parameterized inversion: bgaPEST, a Bayesian geostatistical approach implementation with PEST: documentation and instructions

    USGS Publications Warehouse

    Fienen, Michael N.; D'Oria, Marco; Doherty, John E.; Hunt, Randall J.

    2013-01-01

    The application bgaPEST is a highly parameterized inversion software package implementing the Bayesian Geostatistical Approach in a framework compatible with the parameter estimation suite PEST. Highly parameterized inversion refers to cases in which parameters are distributed in space or time and are correlated with one another. The Bayesian aspect of bgaPEST is related to Bayesian probability theory in which prior information about parameters is formally revised on the basis of the calibration dataset used for the inversion. Conceptually, this approach formalizes the conditionality of estimated parameters on the specific data and model available. The geostatistical component of the method refers to the way in which prior information about the parameters is used. A geostatistical autocorrelation function is used to enforce structure on the parameters to avoid overfitting and unrealistic results. Bayesian Geostatistical Approach is designed to provide the smoothest solution that is consistent with the data. Optionally, users can specify a level of fit or estimate a balance between fit and model complexity informed by the data. Groundwater and surface-water applications are used as examples in this text, but the possible uses of bgaPEST extend to any distributed parameter applications.

  4. Improving spatio-temporal benefit transfers for pest control by generalist predators in cotton in the southwestern U.S.

    USGS Publications Warehouse

    Wiederholt, Ruscena; Bagstad, Kenneth J.; McCracken, Gary F.; Diffendorfer, Jay E.; Loomis, John B.; Semmens, Darius J.; Russell, Amy L.; Sansone, Chris; LaSharr, Kelsie; Cryan, Paul; Reynoso, Claudia; Medellin, Rodrigo A.; Lopez-Hoffman, Laura

    2017-01-01

    Given rapid changes in agricultural practice, it is critical to understand how alterations in ecological, technological, and economic conditions over time and space impact ecosystem services in agroecosystems. Here, we present a benefit transfer approach to quantify cotton pest-control services provided by a generalist predator, the Mexican free-tailed bat (Tadarida brasiliensis mexicana), in the southwestern United States. We show that pest-control estimates derived using (1) a compound spatial–temporal model – which incorporates spatial and temporal variability in crop pest-control service values – are likely to exhibit less error than those derived using (2) a simple-spatial model (i.e., a model that extrapolates values derived for one area directly, without adjustment, to other areas) or (3) a simple-temporal model (i.e., a model that extrapolates data from a few points in time over longer time periods). Using our compound spatial–temporal approach, the annualized pest-control value was \\$12.2 million, in contrast to an estimate of \\$70.1 million (5.7 times greater), obtained from the simple-spatial approach. Using estimates from one year (simple-temporal approach) revealed large value differences (0.4 times smaller to 2 times greater). Finally, we present a detailed protocol for valuing pest-control services, which can be used to develop robust pest-control transfer functions for generalist predators in agroecosystems.

  5. Optimal control of soybean aphid in the presence of natural enemies and the implied value of their ecosystem services.

    PubMed

    Zhang, Wei; Swinton, Scott M

    2012-04-15

    By suppressing pest populations, natural enemies provide an important ecosystem service that maintains the stability of agricultural ecosystems systems and potentially mitigates producers' pest control costs. Integrating natural control services into decisions about pesticide-based control has the potential to significantly improve the economic efficiency of pesticide use, with socially desirable outcomes. Two gaps have hindered the incorporation of natural enemies into pest management decision rules: (1) insufficient knowledge of pest and predator population dynamics and (2) lack of a decision framework for the economic tradeoffs among pest control options. Using a new intra-seasonal, dynamic bioeconomic optimization model, this study assesses how predation by natural enemies contributes to profit-maximizing pest management strategies. The model is applied to the management of the invasive soybean aphid, the most significant serious insect threat to soybean production in North America. The resulting lower bound estimate of the value of natural pest control ecosystem services was estimated at $84 million for the states of Illinois, Indiana, Iowa, Michigan and Minnesota in 2005. Copyright © 2011 Elsevier Ltd. All rights reserved.

  6. A universal Model-R Coupler to facilitate the use of R functions for model calibration and analysis

    USGS Publications Warehouse

    Wu, Yiping; Liu, Shuguang; Yan, Wende

    2014-01-01

    Mathematical models are useful in various fields of science and engineering. However, it is a challenge to make a model utilize the open and growing functions (e.g., model inversion) on the R platform due to the requirement of accessing and revising the model's source code. To overcome this barrier, we developed a universal tool that aims to convert a model developed in any computer language to an R function using the template and instruction concept of the Parameter ESTimation program (PEST) and the operational structure of the R-Soil and Water Assessment Tool (R-SWAT). The developed tool (Model-R Coupler) is promising because users of any model can connect an external algorithm (written in R) with their model to implement various model behavior analyses (e.g., parameter optimization, sensitivity and uncertainty analysis, performance evaluation, and visualization) without accessing or modifying the model's source code.

  7. Potato cyst nematodes: pests of national importance

    USDA-ARS?s Scientific Manuscript database

    Potato cyst nematodes (PCN; G. rostochiensis and G. pallida) are internationally-recognized quarantine pests and considered the most devastating pests of potatoes due to annual worldwide yield losses estimated at 12.2%. PCNs continue to spread throughout North America and were recently detected in I...

  8. A remote sensing assessment of pest infestation on sorghum

    NASA Astrophysics Data System (ADS)

    Singh, D.; Sao, R.; Singh, K. P.

    The damage caused by the pest to crop is well known. The major aspects of remote sensing are timely estimates of agriculture crop yield, prediction of pest. Therefore, in this paper, an attempt has been made to investigate the utility and potential application of microwave remote sensing for detection of pest infestation within sorghum field. The studies were made on crop sorghum (Meethi Sudan) that is a forage variety and the pest observed was a species of grasshopper. The beds of crop sorghum were specially prepared for pests as well as microwave scattering measurements. In first phase of study, dependence of occurrence of pests on sorghum plant parameters (i.e., crop covered moist soil (SM), plant height (PH), leaf area index (LAI), percentage biomass (BIO), total chlorophyll (TC)) have been observed and analyzed and it was noticed that pests were more dependent on sorghum chlorophyll than other plant parameters, while climatic conditions were taken as constant. An empirical relationship has been developed between occurrence of pests and TC with quite significant values of coefficient of determination ( r2 = 0.82). These crop parameters are easily assessable through microwave remote sensing and therefore they can form the basis for prediction of pest remotely. In the second phase of this study, several observations were carried out for various growth stages of sorghum using scatterometer for both like polarizations (i.e., HH- and VV-) and different incidence angles at X-band (9.5 GHz). Linear regression analysis was carried out to obtain the best suitable incidence angle and polarization to assess the sorghum TC. VV-pol gives better results than HH-pol and incidence angle should be more than 40° for both like polarizations for assessing the sorghum TC at X-band. A negative correlation has been obtained between TC and scattering coefficient with the r2 values (0.69 and 0.75 for HH- and VV-pol, respectively). The TC assessed by the microwave measurements was helpful to estimate the occurrence of pests on sorghum. Based on both phase of study an algorithm is proposed to estimate the number of pest on sorghum by remote sensing method. There is a quite good agreement between observed occurrence of pest and assessed occurrence of pest.

  9. Complete mitochondrial genome sequence of a phytophagous ladybird beetle, Henosepilachna pusillanima (Mulsant) (Coleoptera: Coccinellidae).

    PubMed

    Behere, G T; Firake, D M; Tay, W T; Azad Thakur, N S; Ngachan, S V

    2016-01-01

    Ladybird beetles are generally considered as agriculturally beneficial insects, but the ladybird beetles in the coleopteran subfamily Epilachninae are phytophagous and major plant feeding pest species which causes severe economic losses to cucurbitaceous and solanaceous crops. Henosepilachna pusillanima (Mulsant) is one of the important pest species of ladybird beetle. In this report, we sequenced and characterized the complete mitochondrial genome of H. pusillanima. For sequencing of the complete mitochondrial genome, we used the Ion Torrent sequencing platform. The complete circular mitochondrial genome of the H. pusillanima was determined to be 16,216 bp long. There were totally 13 protein coding genes, 22 transfer RNA, 2 ribosomal RNA and a control (A + T-rich) region estimated to be 1690 bp. The gene arrangement and orientations of assembled mitogenome were identical to the reported predatory ladybird beetle Coccinella septempunctata L. This is the first completely sequenced coleopteran mitochondrial genome from the beetle subfamily Epilachninae from India. Data generated in this study will benefit future comparative genomics studies for understanding the evolutionary relationships between predatory and phytophagous coccinellid beetles.

  10. Calibration of hydrological model with programme PEST

    NASA Astrophysics Data System (ADS)

    Brilly, Mitja; Vidmar, Andrej; Kryžanowski, Andrej; Bezak, Nejc; Šraj, Mojca

    2016-04-01

    PEST is tool based on minimization of an objective function related to the root mean square error between the model output and the measurement. We use "singular value decomposition", section of the PEST control file, and Tikhonov regularization method for successfully estimation of model parameters. The PEST sometimes failed if inverse problems were ill-posed, but (SVD) ensures that PEST maintains numerical stability. The choice of the initial guess for the initial parameter values is an important issue in the PEST and need expert knowledge. The flexible nature of the PEST software and its ability to be applied to whole catchments at once give results of calibration performed extremely well across high number of sub catchments. Use of parallel computing version of PEST called BeoPEST was successfully useful to speed up calibration process. BeoPEST employs smart slaves and point-to-point communications to transfer data between the master and slaves computers. The HBV-light model is a simple multi-tank-type model for simulating precipitation-runoff. It is conceptual balance model of catchment hydrology which simulates discharge using rainfall, temperature and estimates of potential evaporation. Version of HBV-light-CLI allows the user to run HBV-light from the command line. Input and results files are in XML form. This allows to easily connecting it with other applications such as pre and post-processing utilities and PEST itself. The procedure was applied on hydrological model of Savinja catchment (1852 km2) and consists of twenty one sub-catchments. Data are temporary processed on hourly basis.

  11. 75 FR 66084 - Agency Information Collection Activities; Proposed Collection; Comment Request; Pesticide...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-10-27

    ... code 2211); services to buildings and dwellings (NAICS code 5617); exterminating and pest control... Control No. 2070-New] Agency Information Collection Activities; Proposed Collection; Comment Request... Control No. 2070-New. Before submitting the ICR to OMB for review and approval, EPA is soliciting comments...

  12. Neural Correlates of Visual-Spatial Attention in Electrocorticographic Signals in Humans

    DTIC Science & Technology

    2011-09-23

    PEST) procedure (Taylor and Creelman , 1967; Hammett and Snowden, 1995) that was run at the beginning of the session. The PEST procedure selected the...Medical Publishers, Inc. Taylor, M. M., and Creelman , C. D. (1967). PEST: efficient estimates on probabil- ity functions. J. Acoust. Soc. Am. 41

  13. Accuracy of indirect estimation of power output from uphill performance in cycling.

    PubMed

    Millet, Grégoire P; Tronche, Cyrille; Grappe, Frédéric

    2014-09-01

    To use measurement by cycling power meters (Pmes) to evaluate the accuracy of commonly used models for estimating uphill cycling power (Pest). Experiments were designed to explore the influence of wind speed and steepness of climb on accuracy of Pest. The authors hypothesized that the random error in Pest would be largely influenced by the windy conditions, the bias would be diminished in steeper climbs, and windy conditions would induce larger bias in Pest. Sixteen well-trained cyclists performed 15 uphill-cycling trials (range: length 1.3-6.3 km, slope 4.4-10.7%) in a random order. Trials included different riding position in a group (lead or follow) and different wind speeds. Pmes was quantified using a power meter, and Pest was calculated with a methodology used by journalists reporting on the Tour de France. Overall, the difference between Pmes and Pest was -0.95% (95%CI: -10.4%, +8.5%) for all trials and 0.24% (-6.1%, +6.6%) in conditions without wind (<2 m/s). The relationship between percent slope and the error between Pest and Pmes were considered trivial. Aerodynamic drag (affected by wind velocity and orientation, frontal area, drafting, and speed) is the most confounding factor. The mean estimated values are close to the power-output values measured by power meters, but the random error is between ±6% and ±10%. Moreover, at the power outputs (>400 W) produced by professional riders, this error is likely to be higher. This observation calls into question the validity of releasing individual values without reporting the range of random errors.

  14. Weather-based pest forecasting for efficient crop protection

    Treesearch

    Rabiu Olatinwo; Gerrit Hoogenboom

    2014-01-01

    Although insects, pathogens, mites, nematodes, weeds, vertebrates, and arthropods are different in many ways, they are regarded as pests. They are a major constraint to crop productivity and profitability around the world caused by direct and indirect damage to valuable crops. Insect pests, pathogens, and weeds account for an estimated 45% of pre- and post-harvest...

  15. A novel approach to evaluation of pest insect abundance in the presence of noise.

    PubMed

    Embleton, Nina; Petrovskaya, Natalia

    2014-03-01

    Evaluation of pest abundance is an important task of integrated pest management. It has recently been shown that evaluation of pest population size from discrete sampling data can be done by using the ideas of numerical integration. Numerical integration of the pest population density function is a computational technique that readily gives us an estimate of the pest population size, where the accuracy of the estimate depends on the number of traps installed in the agricultural field to collect the data. However, in a standard mathematical problem of numerical integration, it is assumed that the data are precise, so that the random error is zero when the data are collected. This assumption does not hold in ecological applications. An inherent random error is often present in field measurements, and therefore it may strongly affect the accuracy of evaluation. In our paper, we offer a novel approach to evaluate the pest insect population size under the assumption that the data about the pest population include a random error. The evaluation is not based on statistical methods but is done using a spatially discrete method of numerical integration where the data obtained by trapping as in pest insect monitoring are converted to values of the population density. It will be discussed in the paper how the accuracy of evaluation differs from the case where the same evaluation method is employed to handle precise data. We also consider how the accuracy of the pest insect abundance evaluation can be affected by noise when the data available from trapping are sparse. In particular, we show that, contrary to intuitive expectations, noise does not have any considerable impact on the accuracy of evaluation when the number of traps is small as is conventional in ecological applications.

  16. Induction of the Hajdu-Cheney Syndrome Mutation in CD19 B Cells in Mice Alters B-Cell Allocation but Not Skeletal Homeostasis.

    PubMed

    Yu, Jungeun; Zanotti, Stefano; Schilling, Lauren; Schoenherr, Chris; Economides, Aris N; Sanjay, Archana; Canalis, Ernesto

    2018-06-01

    Mice harboring Notch2 mutations replicating Hajdu-Cheney syndrome (Notch2 tm1.1ECan ) have osteopenia and exhibit an increase in splenic marginal zone B cells with a decrease in follicular B cells. Whether the altered B-cell allocation is responsible for the osteopenia of Notch2 tm1.1ECan mutants is unknown. To determine the effect of NOTCH2 activation in B cells on splenic B-cell allocation and skeletal phenotype, a conditional-by-inversion (COIN) Hajdu-Cheney syndrome allele of Notch2 (Notch2 [ΔPEST]COIN ) was used. Cre recombination generates a permanent Notch2 ΔPEST allele expressing a transcript for which sequences coding for the proline, glutamic acid, serine, and threonine-rich (PEST) domain are replaced by a stop codon. CD19-Cre drivers were backcrossed into Notch2 [ΔPEST]COIN/[ΔPEST]COIN to generate CD19-specific Notch2 ΔPEST/ΔPEST mutants and control Notch2 [ΔPEST]COIN/[ΔPEST]COIN littermates. There was an increase in marginal zone B cells and a decrease in follicular B cells in the spleen of CD19 Cre/WT ;Notch2 ΔPEST/ΔPEST mice, recapitulating the splenic phenotype of Notch2 tm1.1ECan mice. The effect was reproduced when the NOTCH1 intracellular domain was induced in CD19-expressing cells (CD19 Cre/WT ;Rosa Notch1/WT mice). However, neither CD19 Cre/WT ;Notch2 ΔPEST/ΔPEST nor CD19 Cre/WT ;Rosa Notch1/WT mice had a skeletal phenotype. Moreover, splenectomies in Notch2 tm1.1ECan mice did not reverse their osteopenic phenotype. In conclusion, Notch2 activation in CD19-expressing cells determines B-cell allocation in the spleen but has no skeletal consequences. Copyright © 2018 American Society for Investigative Pathology. Published by Elsevier Inc. All rights reserved.

  17. Pesticide Product Information System (PPIS)

    EPA Pesticide Factsheets

    PPIS includes registrant name and address, chemical ingredients, toxicity category, product names, distributor brand names, site/pest uses, pesticidal type, formulation code, and registration status for all products registered in the U.S.

  18. Interactions between Neurophysiology and Psychoacoustics: Meeting of the Acoustical Society of America (117th) Held in Syracuse, New York on 22 May 1989

    DTIC Science & Technology

    1989-06-01

    the intensity for which performance equals the chosen value. We use the PEST (parameter estimation by sequential testing; Taylor and Creelman , 1967...forward masking in the auditory nerve." J. Acoust. Soc. Am. 84, 584-591. Taylor, M.M. and Creelman , C.D. (1967). "PEST: Efficient estimates on

  19. Pest risk assessment of the importation into the United States of unprocessed Pinus and Abies logs from Mexico

    Treesearch

    B. M. Tkacz; H. H. Burdsall; G. A. DeNitto; A. Eglitis; J. B. Hanson; J. T. Kliejunas; W. E. Wallner; J. G. O`Brien; E. L. Smith

    1998-01-01

    The unmitigated pest risk potential for the importation of Pinus and Abies logs from all states of Mexico into the United States was assessed by estimating the probability and consequences of establishment of representative insects and pathogens of concern. Twenty-two individual pest risk assessments were prepared for Pinus logs, twelve dealing with insects and ten...

  20. Pest risk assessment of the importation into the United States of unprocessed Eucalyptus logs and chips from South America

    Treesearch

    John T. Kliejunas; Harold H. Burdsall; Gregg A. DeNitto; Andris Eglitis; Dennis A. Haugen; William E. Wallner

    2001-01-01

    In this report, we assess the unmitigated pest risk potential of importing Eucalyptus logs and chips from South America into the United States. To do this, we estimated the likelihood and consequences of introducing representative insects and pathogens of concern. Nineteen individual pest risk assessments were prepared, eleven dealing with insects and eight with...

  1. [Spectral features analysis of Pinus massoniana with pest of Dendrolimus punctatus Walker and levels detection].

    PubMed

    Xu, Zhang-Hua; Liu, Jian; Yu, Kun-Yong; Gong, Cong-Hong; Xie, Wan-Jun; Tang, Meng-Ya; Lai, Ri-Wen; Li, Zeng-Lu

    2013-02-01

    Taking 51 field measured hyperspectral data with different pest levels in Yanping, Fujian Province as objects, the spectral reflectance and first derivative features of 4 levels of healthy, mild, moderate and severe insect pest were analyzed. On the basis of 7 detecting parameters construction, the pest level detecting models were built. The results showed that (1) the spectral reflectance of Pinus massoniana with pests were significantly lower than that of healthy state, and the higher the pest level, the lower the reflectance; (2) with the increase in pest level, the spectral reflectance curves' "green peak" and "red valley" of Pinus massoniana gradually disappeared, and the red edge was leveleds (3) the pest led to spectral "green peak" red shift, red edge position blue shift, but the changes in "red valley" and near-infrared position were complicated; (4) CARI, RES, REA and REDVI were highly relevant to pest levels, and the correlations between REP, RERVI, RENDVI and pest level were weak; (5) the multiple linear regression model with the variables of the 7 detection parameters could effectively detect the pest levels of Dendrolimus punctatus Walker, with both the estimation rate and accuracy above 0.85.

  2. A Simulation Approach to Assessing Sampling Strategies for Insect Pests: An Example with the Balsam Gall Midge

    PubMed Central

    Carleton, R. Drew; Heard, Stephen B.; Silk, Peter J.

    2013-01-01

    Estimation of pest density is a basic requirement for integrated pest management in agriculture and forestry, and efficiency in density estimation is a common goal. Sequential sampling techniques promise efficient sampling, but their application can involve cumbersome mathematics and/or intensive warm-up sampling when pests have complex within- or between-site distributions. We provide tools for assessing the efficiency of sequential sampling and of alternative, simpler sampling plans, using computer simulation with “pre-sampling” data. We illustrate our approach using data for balsam gall midge (Paradiplosis tumifex) attack in Christmas tree farms. Paradiplosis tumifex proved recalcitrant to sequential sampling techniques. Midge distributions could not be fit by a common negative binomial distribution across sites. Local parameterization, using warm-up samples to estimate the clumping parameter k for each site, performed poorly: k estimates were unreliable even for samples of n∼100 trees. These methods were further confounded by significant within-site spatial autocorrelation. Much simpler sampling schemes, involving random or belt-transect sampling to preset sample sizes, were effective and efficient for P. tumifex. Sampling via belt transects (through the longest dimension of a stand) was the most efficient, with sample means converging on true mean density for sample sizes of n∼25–40 trees. Pre-sampling and simulation techniques provide a simple method for assessing sampling strategies for estimating insect infestation. We suspect that many pests will resemble P. tumifex in challenging the assumptions of sequential sampling methods. Our software will allow practitioners to optimize sampling strategies before they are brought to real-world applications, while potentially avoiding the need for the cumbersome calculations required for sequential sampling methods. PMID:24376556

  3. Approaches to highly parameterized inversion-A guide to using PEST for groundwater-model calibration

    USGS Publications Warehouse

    Doherty, John E.; Hunt, Randall J.

    2010-01-01

    Highly parameterized groundwater models can create calibration difficulties. Regularized inversion-the combined use of large numbers of parameters with mathematical approaches for stable parameter estimation-is becoming a common approach to address these difficulties and enhance the transfer of information contained in field measurements to parameters used to model that system. Though commonly used in other industries, regularized inversion is somewhat imperfectly understood in the groundwater field. There is concern that this unfamiliarity can lead to underuse, and misuse, of the methodology. This document is constructed to facilitate the appropriate use of regularized inversion for calibrating highly parameterized groundwater models. The presentation is directed at an intermediate- to advanced-level modeler, and it focuses on the PEST software suite-a frequently used tool for highly parameterized model calibration and one that is widely supported by commercial graphical user interfaces. A brief overview of the regularized inversion approach is provided, and techniques for mathematical regularization offered by PEST are outlined, including Tikhonov, subspace, and hybrid schemes. Guidelines for applying regularized inversion techniques are presented after a logical progression of steps for building suitable PEST input. The discussion starts with use of pilot points as a parameterization device and processing/grouping observations to form multicomponent objective functions. A description of potential parameter solution methodologies and resources available through the PEST software and its supporting utility programs follows. Directing the parameter-estimation process through PEST control variables is then discussed, including guidance for monitoring and optimizing the performance of PEST. Comprehensive listings of PEST control variables, and of the roles performed by PEST utility support programs, are presented in the appendixes.

  4. Domestic cats and dogs create a landscape of fear for pest rodents around rural homesteads.

    PubMed

    Mahlaba, Themb'alilahlwa A M; Monadjem, Ara; McCleery, Robert; Belmain, Steven R

    2017-01-01

    Using domestic predators such as cats to control rodent pest problems around farms and homesteads is common across the world. However, practical scientific evidence on the impact of such biological control in agricultural settings is often lacking. We tested whether the presence of domestic cats and/or dogs in rural homesteads would affect the foraging behaviour of pest rodents. We estimated giving up densities (GUDs) from established feeding patches and estimated relative rodent activity using tracking tiles at 40 homesteads across four agricultural communities. We found that the presence of cats and dogs at the same homestead significantly reduced activity and increased GUDs (i.e. increased perception of foraging cost) of pest rodent species. However, if only cats or dogs alone were present at the homestead there was no observed difference in rodent foraging activity in comparison to homesteads with no cats or dogs. Our results suggest that pest rodent activity can be discouraged through the presence of domestic predators. When different types of predator are present together they likely create a heightened landscape of fear for foraging rodents.

  5. Estimation of the longitudinal and lateral-directional aerodynamic parameters from flight data for the NASA F/A-18 HARV

    NASA Technical Reports Server (NTRS)

    Napolitano, Marcello R.

    1996-01-01

    This progress report presents the results of an investigation focused on parameter identification for the NASA F/A-18 HARV. This aircraft was used in the high alpha research program at the NASA Dryden Flight Research Center. In this study the longitudinal and lateral-directional stability derivatives are estimated from flight data using the Maximum Likelihood method coupled with a Newton-Raphson minimization technique. The objective is to estimate an aerodynamic model describing the aircraft dynamics over a range of angle of attack from 5 deg to 60 deg. The mathematical model is built using the traditional static and dynamic derivative buildup. Flight data used in this analysis were from a variety of maneuvers. The longitudinal maneuvers included large amplitude multiple doublets, optimal inputs, frequency sweeps, and pilot pitch stick inputs. The lateral-directional maneuvers consisted of large amplitude multiple doublets, optimal inputs and pilot stick and rudder inputs. The parameter estimation code pEst, developed at NASA Dryden, was used in this investigation. Results of the estimation process from alpha = 5 deg to alpha = 60 deg are presented and discussed.

  6. Modelling the impact of the exotic forest pest nectria on the New Zealand forest sector and its major trading partners

    Treesearch

    James A. Turner; Joseph Buongiorno; Shushuai Zhu; Jeffrey P. Prestemon

    2007-01-01

    The possible impact of Nectria fuckeliana Booth on the forests and forest industries of New Zealand, a significant exporter of industrial roundwood, was estimated for different scenarios of the spread of the fungal pest and trade measure responses in export markets. An economic model was used to assess the direct effect of the pest and the potential...

  7. The pEst version 2.1 user's manual

    NASA Technical Reports Server (NTRS)

    Murray, James E.; Maine, Richard E.

    1987-01-01

    This report is a user's manual for version 2.1 of pEst, a FORTRAN 77 computer program for interactive parameter estimation in nonlinear dynamic systems. The pEst program allows the user complete generality in definig the nonlinear equations of motion used in the analysis. The equations of motion are specified by a set of FORTRAN subroutines; a set of routines for a general aircraft model is supplied with the program and is described in the report. The report also briefly discusses the scope of the parameter estimation problem the program addresses. The report gives detailed explanations of the purpose and usage of all available program commands and a description of the computational algorithms used in the program.

  8. Automatic estimation of aquifer parameters using long-term water supply pumping and injection records

    NASA Astrophysics Data System (ADS)

    Luo, Ning; Illman, Walter A.

    2016-09-01

    Analyses are presented of long-term hydrographs perturbed by variable pumping/injection events in a confined aquifer at a municipal water-supply well field in the Region of Waterloo, Ontario (Canada). Such records are typically not considered for aquifer test analysis. Here, the water-level variations are fingerprinted to pumping/injection rate changes using the Theis model implemented in the WELLS code coupled with PEST. Analyses of these records yield a set of transmissivity ( T) and storativity ( S) estimates between each monitoring and production borehole. These individual estimates are found to poorly predict water-level variations at nearby monitoring boreholes not used in the calibration effort. On the other hand, the geometric means of the individual T and S estimates are similar to those obtained from previous pumping tests conducted at the same site and adequately predict water-level variations in other boreholes. The analyses reveal that long-term municipal water-level records are amenable to analyses using a simple analytical solution to estimate aquifer parameters. However, uniform parameters estimated with analytical solutions should be considered as first rough estimates. More accurate hydraulic parameters should be obtained by calibrating a three-dimensional numerical model that rigorously captures the complexities of the site with these data.

  9. Invasive alien pests threaten the carbon stored in Europe's forests.

    PubMed

    Seidl, Rupert; Klonner, Günther; Rammer, Werner; Essl, Franz; Moreno, Adam; Neumann, Mathias; Dullinger, Stefan

    2018-04-24

    Forests mitigate climate change by sequestering large amounts of carbon (C). However, forest C storage is not permanent, and large pulses of tree mortality can thwart climate mitigation efforts. Forest pests are increasingly redistributed around the globe. Yet, the potential future impact of invasive alien pests on the forest C cycle remains uncertain. Here we show that large parts of Europe could be invaded by five detrimental alien pests already under current climate. Climate change increases the potential range of alien pests particularly in Northern and Eastern Europe. We estimate the live C at risk from a potential future invasion as 1027 Tg C (10% of the European total), with a C recovery time of 34 years. We show that the impact of introduced pests could be as severe as the current natural disturbance regime in Europe, calling for increased efforts to halt the introduction and spread of invasive alien species.

  10. A Strategy for Understanding Noise-Induced Annoyance

    DTIC Science & Technology

    1988-08-01

    Estimation by Sequential Testing (PEST) (Taylor and Creelman , 1967) can be used to efficiently establish the indifference point for each such pair of...population on applicability of noise rating procedures". Noise Control Engineering, 4, 65-70. Taylor, M. M. & Creelman , C. D. "PEST: Efficient

  11. JUPITER PROJECT - JOINT UNIVERSAL PARAMETER IDENTIFICATION AND EVALUATION OF RELIABILITY

    EPA Science Inventory

    The JUPITER (Joint Universal Parameter IdenTification and Evaluation of Reliability) project builds on the technology of two widely used codes for sensitivity analysis, data assessment, calibration, and uncertainty analysis of environmental models: PEST and UCODE.

  12. Pesticide Product Information System (PPIS)

    EPA Pesticide Factsheets

    The Pesticide Product Information System contains information concerning all pesticide products registered in the United States. It includes registrant name and address, chemical ingredients, toxicity category, product names, distributor brand names, site/pest uses, pesticidal type, formulation code, and registration status.

  13. Automated pattern analysis: A newsilent partner in insect acoustic detection studies

    USDA-ARS?s Scientific Manuscript database

    This seminar reviews methods that have been developed for automated analysis of field-collected sounds used to estimate pest populations and guide insect pest management decisions. Several examples are presented of successful usage of acoustic technology to map insect distributions in field environ...

  14. A meta-analysis of crop pest and natural enemy response to landscape complexity.

    PubMed

    Chaplin-Kramer, Rebecca; O'Rourke, Megan E; Blitzer, Eleanor J; Kremen, Claire

    2011-09-01

    Many studies in recent years have investigated the relationship between landscape complexity and pests, natural enemies and/or pest control. However, no quantitative synthesis of this literature beyond simple vote-count methods yet exists. We conducted a meta-analysis of 46 landscape-level studies, and found that natural enemies have a strong positive response to landscape complexity. Generalist enemies show consistent positive responses to landscape complexity across all scales measured, while specialist enemies respond more strongly to landscape complexity at smaller scales. Generalist enemy response to natural habitat also tends to occur at larger spatial scales than for specialist enemies, suggesting that land management strategies to enhance natural pest control should differ depending on whether the dominant enemies are generalists or specialists. The positive response of natural enemies does not necessarily translate into pest control, since pest abundances show no significant response to landscape complexity. Very few landscape-scale studies have estimated enemy impact on pest populations, however, limiting our understanding of the effects of landscape on pest control. We suggest focusing future research efforts on measuring population dynamics rather than static counts to better characterise the relationship between landscape complexity and pest control services from natural enemies. © 2011 Blackwell Publishing Ltd/CNRS.

  15. Proceedings of the 14th International Conference on the Numerical Simulation of Plasmas

    NASA Astrophysics Data System (ADS)

    Partial Contents are as follows: Numerical Simulations of the Vlasov-Maxwell Equations by Coupled Particle-Finite Element Methods on Unstructured Meshes; Electromagnetic PIC Simulations Using Finite Elements on Unstructured Grids; Modelling Travelling Wave Output Structures with the Particle-in-Cell Code CONDOR; SST--A Single-Slice Particle Simulation Code; Graphical Display and Animation of Data Produced by Electromagnetic, Particle-in-Cell Codes; A Post-Processor for the PEST Code; Gray Scale Rendering of Beam Profile Data; A 2D Electromagnetic PIC Code for Distributed Memory Parallel Computers; 3-D Electromagnetic PIC Simulation on the NRL Connection Machine; Plasma PIC Simulations on MIMD Computers; Vlasov-Maxwell Algorithm for Electromagnetic Plasma Simulation on Distributed Architectures; MHD Boundary Layer Calculation Using the Vortex Method; and Eulerian Codes for Plasma Simulations.

  16. Willingness-to-pay for an area-wide integrated Pest Managment Program to control the Asian Tiger Mosquito in New Jersey.

    USDA-ARS?s Scientific Manuscript database

    Using contingent valuation, the perceived value of an area-wide, integrated pest management program for the Asian tiger mosquito, Aedes albopictus, implemented in Monmouth and Mercer Counties, New Jersey, was estimated. The residents’ maximum willingness-to-pay (WTP) and payment modality was estimat...

  17. The Acoustic Startle Response and Disruption of Aiming. 1. Effect of Stimulus Repetition, Intensity, and Intensity Changes

    DTIC Science & Technology

    1989-11-01

    PEST consisting of an approximate one-third oc- procedure described by Taylor and Creelman tave band centered at 800 Hz (cutoffs at 700 (1967...to some extent Taylor, M. M., and Creelman . C. D. (1967). PEST: Efficient estimates on probability functions. Journal of the performance disruption

  18. Invasive species research in the United States Department of Agriculture-Agricultural Research Service.

    PubMed

    Carruthers, Raymond I

    2003-01-01

    Invasive pests cause huge losses both to agricultural production systems and to the natural environment through displacing native species and decreasing biodiversity. It is now estimated that many thousand exotic insect, weed and pathogen species have been established in the USA and that these invasive species are responsible for a large portion of the $130 billion losses estimated to be caused by pests each year. The Agricultural Research Service (ARS) has responded with extensive research and action programs aimed at understanding these problems and developing new management approaches for their control. This paper provides an overview of some of the ARS research that has been conducted on invasive species over the past few years and addresses both different categories of research and some specific pest systems of high interest to the US Department of Agriculture.

  19. Pest management in Douglas-fir seed orchards: a microcomputer decision method

    Treesearch

    James B. Hoy; Michael I. Haverty

    1988-01-01

    The computer program described provides a Douglas-fir seed orchard manager (user) with a quantitative method for making insect pest management decisions on a desk-top computer. The decision system uses site-specific information such as estimates of seed crop size, insect attack rates, insecticide efficacy and application costs, weather, and crop value. At sites where...

  20. Pathway models for analysing and managing the introduction of alien plant pests—an overview and categorization

    Treesearch

    J.C. Douma; M. Pautasso; R.C. Venette; C. Robinet; L. Hemerik; M.C.M. Mourits; J. Schans; W. van der Werf

    2016-01-01

    Alien plant pests are introduced into new areas at unprecedented rates through global trade, transport, tourism and travel, threatening biodiversity and agriculture. Increasingly, the movement and introduction of pests is analysed with pathway models to provide risk managers with quantitative estimates of introduction risks and effectiveness of management options....

  1. Estimating hydraulic parameters of a heterogeneous aquitard using long-term multi-extensometer and groundwater level data

    NASA Astrophysics Data System (ADS)

    Zhuang, Chao; Zhou, Zhifang; Illman, Walter A.; Guo, Qiaona; Wang, Jinguo

    2017-09-01

    The classical aquitard-drainage model COMPAC has been modified to simulate the compaction process of a heterogeneous aquitard consisting of multiple sub-units (Multi-COMPAC). By coupling Multi-COMPAC with the parameter estimation code PEST++, the vertical hydraulic conductivity ( K v) and elastic ( S ske) and inelastic ( S skp) skeletal specific-storage values of each sub-unit can be estimated using observed long-term multi-extensometer and groundwater level data. The approach was first tested through a synthetic case with known parameters. Results of the synthetic case revealed that it was possible to accurately estimate the three parameters for each sub-unit. Next, the methodology was applied to a field site located in Changzhou city, China. Based on the detailed stratigraphic information and extensometer data, the aquitard of interest was subdivided into three sub-units. Parameters K v, S ske and S skp of each sub-unit were estimated simultaneously and then were compared with laboratory results and with bulk values and geologic data from previous studies, demonstrating the reliability of parameter estimates. Estimated S skp values ranged within the magnitude of 10-4 m-1, while K v ranged over 10-10-10-8 m/s, suggesting moderately high heterogeneity of the aquitard. However, the elastic deformation of the third sub-unit, consisting of soft plastic silty clay, is masked by delayed drainage, and the inverse procedure leads to large uncertainty in the S ske estimate for this sub-unit.

  2. Reducing the risk of invasive forest pests and pathogens: Combining legislation, targeted management and public awareness.

    PubMed

    Klapwijk, Maartje J; Hopkins, Anna J M; Eriksson, Louise; Pettersson, Maria; Schroeder, Martin; Lindelöw, Åke; Rönnberg, Jonas; Keskitalo, E Carina H; Kenis, Marc

    2016-02-01

    Intensifying global trade will result in increased numbers of plant pest and pathogen species inadvertently being transported along with cargo. This paper examines current mechanisms for prevention and management of potential introductions of forest insect pests and pathogens in the European Union (EU). Current European legislation has not been found sufficient in preventing invasion, establishment and spread of pest and pathogen species within the EU. Costs associated with future invasions are difficult to estimate but past invasions have led to negative economic impacts in the invaded country. The challenge is combining free trade and free movement of products (within the EU) with protection against invasive pests and pathogens. Public awareness may mobilise the public for prevention and detection of potential invasions and, simultaneously, increase support for eradication and control measures. We recommend focus on commodities in addition to pathways, an approach within the EU using a centralised response unit and, critically, to engage the general public in the battle against establishment and spread of these harmful pests and pathogens.

  3. Regional groundwater characteristics and hydraulic conductivity based on geological units in Korean peninsula

    NASA Astrophysics Data System (ADS)

    Kim, Y.; Suk, H.

    2011-12-01

    In this study, about 2,000 deep observation wells, stream and/or river distribution, and river's density were analyzed to identify regional groundwater flow trend, based on the regional groundwater survey of four major river watersheds including Geum river, Han river, Youngsan-Seomjin river, and Nakdong river in Korea. Hydrogeologial data were collected to analyze regional groundwater flow characteristics according to geological units. Additionally, hydrological soil type data were collected to estimate direct runoff through SCS-CN method. Temperature and precipitation data were used to quantify infiltration rate. The temperature and precipitation data were also used to quantify evaporation by Thornthwaite method and to evaluate groundwater recharge, respectively. Understanding the regional groundwater characteristics requires the database of groundwater flow parameters, but most hydrogeological data include limited information such as groundwater level and well configuration. In this study, therefore, groundwater flow parameters such as hydraulic conductivities or transmissivities were estimated using observed groundwater level by inverse model, namely PEST (Non-linear Parameter ESTimation). Since groundwater modeling studies have some uncertainties in data collection, conceptualization, and model results, model calibration should be performed. The calibration may be manually performed by changing parameters step by step, or various parameters are simultaneously changed by automatic procedure using PEST program. In this study, both manual and automatic procedures were employed to calibrate and estimate hydraulic parameter distributions. In summary, regional groundwater survey data obtained from four major river watersheds and various data of hydrology, meteorology, geology, soil, and topography in Korea were used to estimate hydraulic conductivities using PEST program. Especially, in order to estimate hydraulic conductivity effectively, it is important to perform in such a way that areas of same or similar hydrogeological characteristics should be grouped into zones. Keywords: regional groundwater, database, hydraulic conductivity, PEST, Korean peninsular Acknowledgements: This work was supported by the Radioactive Waste Management of the Korea Institute of Energy Technology Evaluation and Planning (KETEP) grant funded by the Korea government Ministry of Knowledge Economy (2011T100200152)

  4. iTOUGH2 V6.5

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Finsterle, Stefan A.

    2010-11-01

    iTOUGH2 (inverse TOUGH2) provides inverse modeling capabilities for TOUGH2, a simulator for multi-dimensional , multi-phase, multi-component, non-isothermal flow and transport in fractured porous media. It performs sensitivity analysis, parameter estimation, and uncertainty propagation, analysis in geosciences and reservoir engineering and other application areas. It supports a number of different combination of fluids and components [equation-of-state (EOS) modules]. In addition, the optimization routines implemented in iTOUGH2 can also be used or sensitivity analysis, automatic model calibration, and uncertainty quantification of any external code that uses text-based input and output files. This link is achieved by means of the PEST application programmingmore » interface. iTOUGH2 solves the inverse problem by minimizing a non-linear objective function of the weighted differences between model output and the corresponding observations. Multiple minimization algorithms (derivative fee, gradient-based and second-order; local and global) are available. iTOUGH2 also performs Latin Hypercube Monte Carlos simulation for uncertainty propagation analysis. A detailed residual and error analysis is provided. This upgrade includes new EOS modules (specifically EOS7c, ECO2N and TMVOC), hysteretic relative permeability and capillary pressure functions and the PEST API. More details can be found at http://esd.lbl.gov/iTOUGH2 and the publications cited there. Hardware Req.: Multi-platform; Related/auxiliary software PVM (if running in parallel).« less

  5. The draft genome of the pest tephritid fruit fly Bactrocera tryoni: resources for the genomic analysis of hybridising species.

    PubMed

    Gilchrist, Anthony Stuart; Shearman, Deborah C A; Frommer, Marianne; Raphael, Kathryn A; Deshpande, Nandan P; Wilkins, Marc R; Sherwin, William B; Sved, John A

    2014-12-20

    The tephritid fruit flies include a number of economically important pests of horticulture, with a large accumulated body of research on their biology and control. Amongst the Tephritidae, the genus Bactrocera, containing over 400 species, presents various species groups of potential utility for genetic studies of speciation, behaviour or pest control. In Australia, there exists a triad of closely-related, sympatric Bactrocera species which do not mate in the wild but which, despite distinct morphologies and behaviours, can be force-mated in the laboratory to produce fertile hybrid offspring. To exploit the opportunities offered by genomics, such as the efficient identification of genetic loci central to pest behaviour and to the earliest stages of speciation, investigators require genomic resources for future investigations. We produced a draft de novo genome assembly of Australia's major tephritid pest species, Bactrocera tryoni. The male genome (650-700 Mbp) includes approximately 150 Mb of interspersed repetitive DNA sequences and 60 Mb of satellite DNA. Assessment using conserved core eukaryotic sequences indicated 98% completeness. Over 16,000 MAKER-derived gene models showed a large degree of overlap with other Dipteran reference genomes. The sequence of the ribosomal RNA transcribed unit was also determined. Unscaffolded assemblies of B. neohumeralis and B. jarvisi were then produced; comparison with B. tryoni showed that the species are more closely related than any Drosophila species pair. The similarity of the genomes was exploited to identify 4924 potentially diagnostic indels between the species, all of which occur in non-coding regions. This first draft B. tryoni genome resembles other dipteran genomes in terms of size and putative coding sequences. For all three species included in this study, we have identified a comprehensive set of non-redundant repetitive sequences, including the ribosomal RNA unit, and have quantified the major satellite DNA families. These genetic resources will facilitate the further investigations of genetic mechanisms responsible for the behavioural and morphological differences between these three species and other tephritids. We have also shown how whole genome sequence data can be used to generate simple diagnostic tests between very closely-related species where only one of the species is scaffolded.

  6. Draft genome of the most devastating insect pest of coffee worldwide: the coffee berry borer, Hypothenemus hampei

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Vega, Fernando E.; Brown, Stuart M.; Chen, Hao

    The coffee berry borer, Hypothenemus hampei, is the most economically important insect pest of coffee worldwide. We present an analysis of the draft genome of the coffee berry borer, the third genome for a Coleopteran species. The genome size is ca. 163 Mb with 19,222 predicted protein-coding genes. Analysis was focused on genes involved in primary digestion as well as gene families involved in detoxification of plant defense molecules and insecticides, such as carboxylesterases, cytochrome P450, gluthathione S-transferases, ATP-binding cassette transporters, and a gene that confers resistance to the insecticide dieldrin. A broad range of enzymes capable of degrading complexmore » polysaccharides were identified. We also evaluated the pathogen defense system and found homologs to antimicrobial genes reported in the Drosophila genome. Ten cases of horizontal gene transfer were identified with evidence for expression, integration into the H. hampei genome, and phylogenetic evidence that the sequences are more closely related to bacterial rather than eukaryotic genes. We find the draft genome analysis broadly expands our knowledge on the biology of a devastating tropical insect pest and suggests new pest management strategies.« less

  7. Draft genome of the most devastating insect pest of coffee worldwide: the coffee berry borer, Hypothenemus hampei

    PubMed Central

    Vega, Fernando E.; Brown, Stuart M.; Chen, Hao; Shen, Eric; Nair, Mridul B.; Ceja-Navarro, Javier A.; Brodie, Eoin L.; Infante, Francisco; Dowd, Patrick F.; Pain, Arnab

    2015-01-01

    The coffee berry borer, Hypothenemus hampei, is the most economically important insect pest of coffee worldwide. We present an analysis of the draft genome of the coffee berry borer, the third genome for a Coleopteran species. The genome size is ca. 163 Mb with 19,222 predicted protein-coding genes. Analysis was focused on genes involved in primary digestion as well as gene families involved in detoxification of plant defense molecules and insecticides, such as carboxylesterases, cytochrome P450, gluthathione S-transferases, ATP-binding cassette transporters, and a gene that confers resistance to the insecticide dieldrin. A broad range of enzymes capable of degrading complex polysaccharides were identified. We also evaluated the pathogen defense system and found homologs to antimicrobial genes reported in the Drosophila genome. Ten cases of horizontal gene transfer were identified with evidence for expression, integration into the H. hampei genome, and phylogenetic evidence that the sequences are more closely related to bacterial rather than eukaryotic genes. The draft genome analysis broadly expands our knowledge on the biology of a devastating tropical insect pest and suggests new pest management strategies. PMID:26228545

  8. Draft genome of the most devastating insect pest of coffee worldwide: the coffee berry borer, Hypothenemus hampei

    DOE PAGES

    Vega, Fernando E.; Brown, Stuart M.; Chen, Hao; ...

    2015-07-31

    The coffee berry borer, Hypothenemus hampei, is the most economically important insect pest of coffee worldwide. We present an analysis of the draft genome of the coffee berry borer, the third genome for a Coleopteran species. The genome size is ca. 163 Mb with 19,222 predicted protein-coding genes. Analysis was focused on genes involved in primary digestion as well as gene families involved in detoxification of plant defense molecules and insecticides, such as carboxylesterases, cytochrome P450, gluthathione S-transferases, ATP-binding cassette transporters, and a gene that confers resistance to the insecticide dieldrin. A broad range of enzymes capable of degrading complexmore » polysaccharides were identified. We also evaluated the pathogen defense system and found homologs to antimicrobial genes reported in the Drosophila genome. Ten cases of horizontal gene transfer were identified with evidence for expression, integration into the H. hampei genome, and phylogenetic evidence that the sequences are more closely related to bacterial rather than eukaryotic genes. We find the draft genome analysis broadly expands our knowledge on the biology of a devastating tropical insect pest and suggests new pest management strategies.« less

  9. Interactive effects of pests increase seed yield.

    PubMed

    Gagic, Vesna; Riggi, Laura Ga; Ekbom, Barbara; Malsher, Gerard; Rusch, Adrien; Bommarco, Riccardo

    2016-04-01

    Loss in seed yield and therefore decrease in plant fitness due to simultaneous attacks by multiple herbivores is not necessarily additive, as demonstrated in evolutionary studies on wild plants. However, it is not clear how this transfers to crop plants that grow in very different conditions compared to wild plants. Nevertheless, loss in crop seed yield caused by any single pest is most often studied in isolation although crop plants are attacked by many pests that can cause substantial yield losses. This is especially important for crops able to compensate and even overcompensate for the damage. We investigated the interactive impacts on crop yield of four insect pests attacking different plant parts at different times during the cropping season. In 15 oilseed rape fields in Sweden, we estimated the damage caused by seed and stem weevils, pollen beetles, and pod midges. Pest pressure varied drastically among fields with very low correlation among pests, allowing us to explore interactive impacts on yield from attacks by multiple species. The plant damage caused by each pest species individually had, as expected, either no, or a negative impact on seed yield and the strongest negative effect was caused by pollen beetles. However, seed yield increased when plant damage caused by both seed and stem weevils was high, presumably due to the joint plant compensatory reaction to insect attack leading to overcompensation. Hence, attacks by several pests can change the impact on yield of individual pest species. Economic thresholds based on single species, on which pest management decisions currently rely, may therefore result in economically suboptimal choices being made and unnecessary excessive use of insecticides.

  10. A century and a half of research on the stable fly, Stomoxys calcitrans (L.) (Diptera: Muscidae), 1862-2011: An annotated bibliography

    USDA-ARS?s Scientific Manuscript database

    The stable fly, Stomoxys calcitrans, is a cosmopolitan pest of livestock, wild animals, pets and humans. A major US cattle pest, annual economic loss estimates exceed $1 billion. Control methods have been investigated for over a century, with a major portion of the research focused on biology, ecol...

  11. Robustness of risk maps and survey networks to knowledge gaps about a new invasive pest

    Treesearch

    Denys Yemshanov; Frank H. Koch; Yakov Ben-Haim; William D. Smith

    2010-01-01

    In pest risk assessment it is frequently necessary to make management decisions regarding emerging threats under severe uncertainty. Although risk maps provide useful decision support for invasive alien species, they rarely address knowledge gaps associated with the underlying risk model or how they may change the risk estimates. Failure to recognize uncertainty leads...

  12. Use of plant extracts for tea pest management in India.

    PubMed

    Roy, Somnath; Handique, Gautam; Muraleedharan, Narayanannair; Dashora, Kavya; Roy, Sudipta Mukhopadhyay; Mukhopadhyay, Ananda; Babu, Azariah

    2016-06-01

    India is the second largest producer of black tea in the world. The biggest challenge for tea growers of India nowadays is to combat pests and diseases. Tea crop in India is infested by not less than 720 insect and mite species. At least four sucking pests and six chewing pests have well established themselves as regular pests causing substantial damage to this foliage crop. Various synthetic pesticides are widely used for the management of tea pests in India. Applications of such large quantity of pesticides could cause various problems such as development of resistance, deleterious effects on non-target organisms such as insect predators and parasitoids, upsetting the ecological balance, and accumulation of pesticide residues on tea leaves. There is a growing demand for organic tea or at least pesticide residue free tea in the international market which affects the export price. There is also a higher emphasis of implementation of new regulations on internationally traded foods and implementation of Plant Protection Code (PPC) for tea by the Government of India. This necessitates a relook into the usage pattern of synthetic pesticides on this crop. There are various non-chemical interventions which are being worked out for their sustainability, compatibility, and eco-friendly properties which can gradually replace the use of toxic chemicals. The application of plant extracts with insecticidal properties provides an alternative to the synthetic pesticides. Botanical products, especially neem-based products, have made a relatively moderate impact in tea pest control. Research has also demonstrated the potential of 67 plant species as botanical insecticides against tea pests. The majority of plant products used in pest management of tea in India are in the form of crude extracts prepared locally in tea garden itself, and commercial standardized formulations are not available for most of the plants due to lack of scientific research in the area. Apart from systematic research in this area, to facilitate the simplified and trade friendly registration procedures with quality assurance of the products, there is an increasing need of regulatory authority and national norms in India.

  13. Modelling the current and potential future distributions of the sunn pest Eurygaster integriceps (Hemiptera: Scutelleridae) using CLIMEX.

    PubMed

    Aljaryian, Rasha; Kumar, Lalit; Taylor, Subhashni

    2016-10-01

    The sunn pest, Eurygaster integriceps (Hemiptera: Scutelleridae), is an economically significant pest throughout Western Asia and Eastern Europe. This study was conducted to examine the possible risk posed by the influence of climate change on its spread. CLIMEX software was used to model its current global distribution. Future invasion potential was investigated using two global climate models (GCMs), CSIRO-Mk3.0 (CS) and MIROC-H (MR), under A1B and A2 emission scenarios for 2030, 2070 and 2100. Dry to temperate climatic areas favour sunn pests. The potential global range for E. integriceps is expected to extend further polewards between latitudes 60° N and 70° N. Northern Europe and Canada will be at risk of sunn pest invasion as cold stress boundaries recede under the emission scenarios of these models. However, current highly suitable areas, such as South Africa and central Australia, will contract where precipitation is projected to decrease substantially with increased heat stress. Estimating the sunn pest's potential geographic distribution and detecting its climatic limits can provide useful information for management strategies and allow biosecurity authorities to plan ahead and reduce the expected harmful economic consequences by identifying the new areas for pest invasion. © 2016 Society of Chemical Industry. © 2016 Society of Chemical Industry.

  14. Main predators of insect pests: screening and evaluation through comprehensive indices.

    PubMed

    Yang, Tingbang; Liu, Jie; Yuan, Longyu; Zhang, Yang; Peng, Yu; Li, Daiqin; Chen, Jian

    2017-11-01

    Predatory natural enemies play key functional roles in integrated pest management. However, the screening and evaluation of the main predators of insect pests has seldom been reported in the field. Here, we employed comprehensive indices for evaluating the predation of a common pest (Ectropis obliqua) by nine common spider species in Chinese tea plantations. We established the relative dominance of the spider species and their phenological overlap with the pest species, and analyzed DNA from the nine spider species using targeted real-time quantitative polymerase chain reaction to identify the residual DNA of E. obliqua. The predation rates and predation numbers per predator were estimated by the positive rates of target fragments and the residual minimum number of E. obliqua in predators' guts, respectively. The results showed that only four spider species preyed on E. obliqua, and the order of potential of the spiders to control E. obliqua from greatest to smallest was Neoscona mellotteei, Xysticus ephippiatus, Evarcha albaria and Coleosoma octomaculatum by the Z-score method. The orb-weaving spider N. mellotteei has the maximum potential as a biological control agent of E. obliqua in an integrated pest management strategy. An approach of screening and evaluating main predators of insect pests through comprehensive indices was preliminarily established. © 2017 Society of Chemical Industry. © 2017 Society of Chemical Industry.

  15. A century and a half of research on the Stable Fly, Stomoxys calcitrans (L.) (Diptera: Muscidae), 1862-2011: an annotated bibliography

    USDA-ARS?s Scientific Manuscript database

    The stable fly, Stomoxys calcitrans, is a cosmopolitan pest of livestock, wild animals, pets and humans. It is a primary pest of cattle in the United States, estimated to cause more than $1 billion in economic losses annually. It also causes dissention at the rural-urban interface and is a problem i...

  16. Pest risk assessment of the importation into the United States of unprocessed Pinus logs and chips from Australia

    Treesearch

    John T Kliejunas; Harold H. Burdsall; Gregg A. DeNitto; Andris Eglitis; Dennis A. Haugen; Michael I. Haverty; Jessie A. Micales-Glaeser

    2006-01-01

    The unmitigated pest risk potential for the importation of unprocessed logs and chips of species of Pinus (Pinus radiata, P. elliottii Engelm. var. elliottii, P. taeda L., and P. caribaea var. hondurensis, principally) from Australia into the United States was assessed by estimating the likelihood and consequences of introduction of representative insects and pathogens...

  17. Make your trappings count: The mathematics of pest insect monitoring. Comment on “Multiscale approach to pest insect monitoring: Random walks, pattern formation, synchronization, and networks” by Petrovskii et al.

    NASA Astrophysics Data System (ADS)

    Blasius, Bernd

    2014-09-01

    Since the beginnings of agriculture the production of crops is characterized by an ongoing battle between farmers and pests [1]. Already during biblical times swarms of the desert locust, Schistocerca gregaria, were known as major pest that can devour a field of corn within an hour. Even today, harmful organisms have the potential to threaten food production worldwide. It is estimated that about 37% of all potential crops are destroyed by pests. Harmful insects alone destroy 13%, causing financial losses in the agricultural industry of millions of dollars each year [2-4]. These numbers emphasize the importance of pest insect monitoring as a crucial step of integrated pest management [1]. The main approach to gain information about infestation levels is based on trapping, which leads to the question of how to extrapolate the sparse population counts at singularly disposed traps to a spatial representation of the pest species distribution. In their review Petrovskii et al. provide a mathematical framework to tackle this problem [5]. Their analysis reveals that this seemingly inconspicuous problem gives rise to surprisingly deep mathematical challenges that touch several modern contemporary concepts of statistical physics and complex systems theory. The review does not aim for a collection of numerical recipes to support crop growers in the analysis of their trapping data. Instead the review identifies the relevant biological and physical processes that are involved in pest insect monitoring and it presents the mathematical techniques that are required to capture these processes.

  18. Factors influencing the abundance of pests in production fields and rates of interception of Dracaena marginata imported from Costa Rica.

    PubMed

    Hidalgo, Eduardo; Benjamin, Tamara; Casanoves, Fernando; Sadof, Clifford

    2013-10-01

    Importation of live nursery plants, like Dracaena marginata Lamoureux (Ruscaceae), can provide a significant pathway for the entry of foliar pests from overseas into the United States. We studied the abundance of foliar pests of quarantine importance found on Costa Rican-grown D. marginata. These include five genera of leafhoppers (Heteroptera: Cicadellidae, Oncometopia, Caldweliola, Diestostema, Cypona, and Empoasca), Florida red scale (Heteroptera: Disapididae, Chrysomphalus aoinidum (L.)), katydids (Orthoptera: Tettigoniidae), and a snail (Succinea costarricana von Martens (Gastropoda, Stylommatophora, Succineidae)). In our first study, we examined the rationale behind size restrictions on Dracaena cuttings imported into the United States from Costa Rica. When comparing plant size, no differences were found in the abundance of quarantined pests on small (15-46 cm), medium (46-81 cm), and large (81-152 cm) propagules. In a second study, we estimated monthly abundances of pests in production plots for 1 yr to determine their relationship to rates of interception at U.S. ports. In any given month, < 6% of the marketable shoots standing in the field were infested with at least one quarantine pest. There was no relationship between the average monthly frequencies of pest detection in the field and in U.S. inspection ports. Pest detections increased during the 1 mo when average monthly shipments were abnormally high. Our data suggest that off-shore postprocessing efforts to remove pest-infested material from the market stream need to be adjusted to accommodate sharp increases in the volume of shipped plants.

  19. Thrips advisor: exploiting thrips-induced defences to combat pests on crops.

    PubMed

    Steenbergen, Merel; Abd-El-Haliem, Ahmed; Bleeker, Petra; Dicke, Marcel; Escobar-Bravo, Rocio; Cheng, Gang; Haring, Michel A; Kant, Merijn R; Kappers, Iris; Klinkhamer, Peter G L; Leiss, Kirsten A; Legarrea, Saioa; Macel, Mirka; Mouden, Sanae; Pieterse, Corné M J; Sarde, Sandeep J; Schuurink, Robert C; De Vos, Martin; Van Wees, Saskia C M; Broekgaarden, Colette

    2018-04-09

    Plants have developed diverse defence mechanisms to ward off herbivorous pests. However, agriculture still faces estimated crop yield losses ranging from 25% to 40% annually. These losses arise not only because of direct feeding damage, but also because many pests serve as vectors of plant viruses. Herbivorous thrips (Thysanoptera) are important pests of vegetable and ornamental crops worldwide, and encompass virtually all general problems of pests: they are highly polyphagous, hard to control because of their complex lifestyle, and they are vectors of destructive viruses. Currently, control management of thrips mainly relies on the use of chemical pesticides. However, thrips rapidly develop resistance to these pesticides. With the rising demand for more sustainable, safer, and healthier food production systems, we urgently need to pinpoint the gaps in knowledge of plant defences against thrips to enable the future development of novel control methods. In this review, we summarize the current, rather scarce, knowledge of thrips-induced plant responses and the role of phytohormonal signalling and chemical defences in these responses. We describe concrete opportunities for breeding resistance against pests such as thrips as a prototype approach for next-generation resistance breeding.

  20. Utilizing High-Performance Computing to Investigate Parameter Sensitivity of an Inversion Model for Vadose Zone Flow and Transport

    NASA Astrophysics Data System (ADS)

    Fang, Z.; Ward, A. L.; Fang, Y.; Yabusaki, S.

    2011-12-01

    High-resolution geologic models have proven effective in improving the accuracy of subsurface flow and transport predictions. However, many of the parameters in subsurface flow and transport models cannot be determined directly at the scale of interest and must be estimated through inverse modeling. A major challenge, particularly in vadose zone flow and transport, is the inversion of the highly-nonlinear, high-dimensional problem as current methods are not readily scalable for large-scale, multi-process models. In this paper we describe the implementation of a fully automated approach for addressing complex parameter optimization and sensitivity issues on massively parallel multi- and many-core systems. The approach is based on the integration of PNNL's extreme scale Subsurface Transport Over Multiple Phases (eSTOMP) simulator, which uses the Global Array toolkit, with the Beowulf-Cluster inspired parallel nonlinear parameter estimation software, BeoPEST in the MPI mode. In the eSTOMP/BeoPEST implementation, a pre-processor generates all of the PEST input files based on the eSTOMP input file. Simulation results for comparison with observations are extracted automatically at each time step eliminating the need for post-process data extractions. The inversion framework was tested with three different experimental data sets: one-dimensional water flow at Hanford Grass Site; irrigation and infiltration experiment at the Andelfingen Site; and a three-dimensional injection experiment at Hanford's Sisson and Lu Site. Good agreements are achieved in all three applications between observations and simulations in both parameter estimates and water dynamics reproduction. Results show that eSTOMP/BeoPEST approach is highly scalable and can be run efficiently with hundreds or thousands of processors. BeoPEST is fault tolerant and new nodes can be dynamically added and removed. A major advantage of this approach is the ability to use high-resolution geologic models to preserve the spatial structure in the inverse model, which leads to better parameter estimates and improved predictions when using the inverse-conditioned realizations of parameter fields.

  1. The complete mitochondrial genome of the American black flour beetle Tribolium audax (Coleoptera: Tenebrionidae).

    PubMed

    Ou, Jing; Liu, Jin-Bo; Yao, Fu-Jiao; Wang, Xin-Guo; Wei, Zhao-Ming

    2016-01-01

    Flour beetles of the genus Tribolium are all pests of stored products and cause severe economic losses every year. The American black flour beetle Tribolium audax is one of the important pest species of flour beetle, and it is also an important quarantine insect. Here we sequenced and characterized the complete mitochondrial genome of T. audax, which was intercepted by Huangpu Custom in maize from America. The complete circular mitochondrial genome (mitogenome) of T. audax was 15,924 bp in length, containing 37 typical coding genes and one non-coding AT-rich region. The mitogenome of T. audax exhibits a gene arrangement and content identical to the most common type in insects. All protein coding genes (PCGs) are start with a typical ATN initiation codon, except for the cox1, which use AAC as its start codon instead of ATN. Eleven genes use standard complete termination codon (nine TAA, two TAG), whereas the nad4 and nad5 genes end with single T. Except for trnS1 (AGN), all tRNA genes display typical secondary cloverleaf structures as those of other insects. The sizes of the large and small ribosomal RNA genes are 1288 and 780 bp, respectively. The AT content of the AT-rich region is 81.36%. The 5 bp conserved motif TACTA was found in the intergenic region between trnS2 (UCN) and nad1.

  2. Modelling the impacts of pests and diseases on agricultural systems.

    PubMed

    Donatelli, M; Magarey, R D; Bregaglio, S; Willocquet, L; Whish, J P M; Savary, S

    2017-07-01

    The improvement and application of pest and disease models to analyse and predict yield losses including those due to climate change is still a challenge for the scientific community. Applied modelling of crop diseases and pests has mostly targeted the development of support capabilities to schedule scouting or pesticide applications. There is a need for research to both broaden the scope and evaluate the capabilities of pest and disease models. Key research questions not only involve the assessment of the potential effects of climate change on known pathosystems, but also on new pathogens which could alter the (still incompletely documented) impacts of pests and diseases on agricultural systems. Yield loss data collected in various current environments may no longer represent a adequate reference to develop tactical, decision-oriented, models for plant diseases and pests and their impacts, because of the ongoing changes in climate patterns. Process-based agricultural simulation modelling, on the other hand, appears to represent a viable methodology to estimate the impacts of these potential effects. A new generation of tools based on state-of-the-art knowledge and technologies is needed to allow systems analysis including key processes and their dynamics over appropriate suitable range of environmental variables. This paper offers a brief overview of the current state of development in coupling pest and disease models to crop models, and discusses technical and scientific challenges. We propose a five-stage roadmap to improve the simulation of the impacts caused by plant diseases and pests; i) improve the quality and availability of data for model inputs; ii) improve the quality and availability of data for model evaluation; iii) improve the integration with crop models; iv) improve the processes for model evaluation; and v) develop a community of plant pest and disease modelers.

  3. New microsatellites revealed strong gene flow among populations of a new outbreak pest, Athetis lepigone (Möschler).

    PubMed

    Zhu, W-C; Sun, J-T; Dai, J; Huang, J-R; Chen, L; Hong, X-Y

    2017-11-27

    Athetis lepigone (Möschler) (Lepidoptera: Noctuidae) is a new outbreak pest in China. Consequently, it is unclear whether the emergence and spread of the outbreak of this pest are triggered by rapid in situ population size increases in each outbreak area, or by immigrants from a potential source area in China. In order to explore the outbreak process of this pest through a population genetics approach, we developed ten novel polymorphic expressed sequence tags (EST)-derived microsatellites. These new microsatellites had moderately high levels of polymorphism in the tested population. The number of alleles per locus ranged from 3 to 19, with an average of 8.6, and the expected heterozygosity ranged from 0.269 to 0.783. A preliminary population genetic analysis using these new microsatellites revealed a lack of population genetic structure in natural populations of A. lepigone. The estimates of recent migration rate revealed strong gene flow among populations. In conclusion, our study developed the first set of EST-microsatellite markers and shed a new light on the population genetic structure of this pest in China.

  4. Solutions Network Formulation Report. Using NASA Sensors to Perform Crop Type Assessment for Monitoring Insect Resistance in Corn

    NASA Technical Reports Server (NTRS)

    Lewis, David; Copenhaver, Ken; Anderson, Daniel; Hilbert, Kent

    2007-01-01

    The EPA (U.S. Environmental Protection Agency) is tasked to monitor for insect pest resistance to transgenic crops. Several models have been developed to understand the resistance properties of insects. The Population Genetics Simulator model is used in the EPA PIRDSS (Pest Infestation and Resistance Decision Support System). The EPA Office of Pesticide Programs uses the DSS to help understand the potential for insect pest resistance development and the likelihood that insect pest resistance will negatively affect transgenic corn. Once the DSS identifies areas of concern, crews are deployed to collect insect pest samples, which are tested to identify whether they have developed resistance to the toxins in transgenic corn pesticides. In this candidate solution, VIIRS (Visible/Infrared Imager/Radiometer Suite) vegetation index products will be used to build hypertemporal layerstacks for crop type and phenology assessment. The current phenology attribute is determined by using the current time of year to index the expected growth stage of the crop. VIIRS might provide more accurate crop type assessment and also might give a better estimate on the crop growth stage.

  5. Transgenic expression of a maize geranyl geranyl transferase gene sequence in maize callus increases resistance to ear rot pathogens

    USDA-ARS?s Scientific Manuscript database

    Determining the genes responsible for pest resistance in maize can allow breeders to develop varieties with lower losses and less contamination with undesirable toxins. A gene sequence coding for a geranyl geranyl transferase-like protein located in a fungal ear rot resistance quantitative trait loc...

  6. Insect resistance to sugar beet pests mediated by a Beta vulgaris proteinase inhibitor transgene

    USDA-ARS?s Scientific Manuscript database

    We transformed sugar beet (Beta vulgaris) hairy roots and Nicotiana benthamiana plants with a Beta vulgaris root gene (BvSTI) that codes for a serine proteinase inhibitor. BvSTI is a root gene cloned from the F1016 breeding line that has moderate levels of resistance to the sugar beet root maggot ...

  7. Phylogeny of economically important insect pests that infesting several crops species in Malaysia

    NASA Astrophysics Data System (ADS)

    Ghazali, Siti Zafirah; Zain, Badrul Munir Md.; Yaakop, Salmah

    2014-09-01

    This paper reported molecular data on insect pests of commercial crops in Peninsular Malaysia. Fifteen insect pests (Metisa plana, Calliteara horsefeldii, Cotesia vestalis, Bactrocera papayae, Bactrocera carambolae, Bactrocera latifrons, Conopomorpha cramella, Sesamia inferens, Chilo polychrysa, Rhynchophorus vulneratus, and Rhynchophorus ferrugineus) of nine crops were sampled (oil palm, coconut, paddy, cocoa, starfruit, angled loofah, guava, chili and mustard) and also four species that belong to the fern's pest (Herpetogramma platycapna) and storage and rice pests (Tribolium castaneum, Oryzaephilus surinamensis and Cadra cautella). The presented phylogeny summarized the initial phylogenetic hypothesis, which concerning by implementation of the economically important insect pests. In this paper, phylogenetic relationships among 39 individuals of 15 species that belonging to three orders under 12 genera were inferred from DNA sequences of mitochondrial marker, cytochrome oxidase subunit I (COI) and nuclear marker, ribosomal DNA 28S D2 region. The phylogenies resulted from the phylogenetic analyses of both genes are relatively similar, but differ in the sequence of evolution. Interestingly, this most recent molecular data of COI sequences data by using Bayesian Inference analysis resulted a more-resolved phylogeny that corroborated with traditional hypotheses of holometabolan relationships based on traditional hypotheses of holometabolan relationships and most of recently molecular study compared to 28S sequences. This finding provides the information on relationships of pests species, which infested several crops in Malaysia and also estimation on Holometabola's order relationships. The identification of the larval stages of insect pests could be done accurately, without waiting the emergence of adults and supported by the phylogenetic tree.

  8. MicroRNA and dsRNA targeting chitin synthase A reveal a great potential for pest management of the hemipteran insect Nilaparvata lugens.

    PubMed

    Li, Tengchao; Chen, Jie; Fan, Xiaobin; Chen, Weiwen; Zhang, Wenqing

    2017-07-01

    Two RNA silencing pathways in insects are known to exist that are mediated by short interfering RNAs (siRNAs) and microRNAs (miRNAs), which have been hypothesised to be promising methods for insect pest control. However, a comparison between miRNA and siRNA in pest control is still unavailable, particularly in targeting chitin synthase gene A (CHSA). The dsRNA for Nilaparvata lugens CHSA (dsNlCHSA) and the microR-2703 (miR-2703) mimic targeting NlCHSA delivered via feeding affected the development of nymphs, reduced their chitin content and led to lethal phenotypes. The protein level of NlCHSA was downregulated after female adults were injected with dsNlCHSA or the miR-2703 mimic, but there were no significant differences in vitellogenin (NlVg) expression or in total oviposition relative to the control group. However, 90.68 and 46.13% of the eggs laid by the females injected with dsNlCHSA and miR-2703 mimic were unable to hatch, respectively. In addition, a second-generation miRNA and RNAi effect on N. lugens was observed. Ingested miR-2703 seems to be a good option for killing N. lugens nymphs, while NlCHSA may be a promising target for RNAi-based pest management. These findings provide important evidence for applications of small non-coding RNAs (snRNAs) in insect pest management. © 2016 Society of Chemical Industry. © 2016 Society of Chemical Industry.

  9. The genome of the Hi5 germ cell line from Trichoplusia ni, an agricultural pest and novel model for small RNA biology

    PubMed Central

    Fu, Yu; Yang, Yujing; Zhang, Han; Farley, Gwen; Wang, Junling; Quarles, Kaycee A

    2018-01-01

    We report a draft assembly of the genome of Hi5 cells from the lepidopteran insect pest, Trichoplusia ni, assigning 90.6% of bases to one of 28 chromosomes and predicting 14,037 protein-coding genes. Chemoreception and detoxification gene families reveal T. ni-specific gene expansions that may explain its widespread distribution and rapid adaptation to insecticides. Transcriptome and small RNA data from thorax, ovary, testis, and the germline-derived Hi5 cell line show distinct expression profiles for 295 microRNA- and >393 piRNA-producing loci, as well as 39 genes encoding small RNA pathway proteins. Nearly all of the W chromosome is devoted to piRNA production, and T. ni siRNAs are not 2´-O-methylated. To enable use of Hi5 cells as a model system, we have established genome editing and single-cell cloning protocols. The T. ni genome provides insights into pest control and allows Hi5 cells to become a new tool for studying small RNAs ex vivo. PMID:29376823

  10. Determining Visual Acuity Thresholds: A Simulation Study of Stimulus Presentation Strategies,

    DTIC Science & Technology

    1981-08-01

    besides the two discussed in this paper. There is the PEST technique of Taylor and Creelman (8), the transformed up and down methods (Levitt (5)), a...sensory information on each trial and not responding on the basis of psychological factors such as memory for previous responses, desire to seek or avoid...Psychophysics, 28:377-379, 1980. 8. Ta, lzr, M. M., and Creelman , C. D., PEST: Efficient estimates on probability functions, J. Acoust. Soc. Am., 41

  11. Cost-Benefit Analysis for Biological Control Programs That Targeted Insect Pests of Eucalypts in Urban Landscapes of California.

    PubMed

    Paine, T D; Millar, J G; Hanks, L M; Gould, J; Wang, Q; Daane, K; Dahlsten, D L; Mcpherson, E G

    2015-12-01

    As well as being planted for wind breaks, landscape trees, and fuel wood, eucalypts are also widely used as urban street trees in California. They now are besieged by exotic insect herbivores of four different feeding guilds. The objective of the current analysis was to determine the return on investment from biological control programs that have targeted these pests. Independent estimates of the total number of eucalypt street trees in California ranged from a high of 476,527 trees (based on tree inventories from 135 California cities) to a low of 190,666 trees (based on 49 tree inventories). Based on a survey of 3,512 trees, the estimated mean value of an individual eucalypt was US$5,978. Thus, the total value of eucalypt street trees in California ranged from more than US$1.0 billion to more than US$2.8 billion. Biological control programs that targeted pests of eucalypts in California have cost US$2,663,097 in extramural grants and University of California salaries. Consequently, the return derived from protecting the value of this resource through the biological control efforts, per dollar expended, ranged from US$1,070 for the high estimated number of trees to US$428 for the lower estimate. The analyses demonstrate both the tremendous value of urban street trees, and the benefits that stem from successful biological control programs aimed at preserving these trees. Economic analyses such as this, which demonstrate the substantial rates of return from successful biological control of invasive pests, may play a key role in developing both grass-roots and governmental support for future urban biological control efforts. © The Authors 2015. Published by Oxford University Press on behalf of Entomological Society of America. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

  12. Primary and Secondary Yield Losses Caused by Pests and Diseases: Assessment and Modeling in Coffee

    PubMed Central

    Gary, Christian; Tixier, Philippe; Lechevallier, Esther

    2017-01-01

    The assessment of crop yield losses is needed for the improvement of production systems that contribute to the incomes of rural families and food security worldwide. However, efforts to quantify yield losses and identify their causes are still limited, especially for perennial crops. Our objectives were to quantify primary yield losses (incurred in the current year of production) and secondary yield losses (resulting from negative impacts of the previous year) of coffee due to pests and diseases, and to identify the most important predictors of coffee yields and yield losses. We established an experimental coffee parcel with full-sun exposure that consisted of six treatments, which were defined as different sequences of pesticide applications. The trial lasted three years (2013–2015) and yield components, dead productive branches, and foliar pests and diseases were assessed as predictors of yield. First, we calculated yield losses by comparing actual yields of specific treatments with the estimated attainable yield obtained in plots which always had chemical protection. Second, we used structural equation modeling to identify the most important predictors. Results showed that pests and diseases led to high primary yield losses (26%) and even higher secondary yield losses (38%). We identified the fruiting nodes and the dead productive branches as the most important and useful predictors of yields and yield losses. These predictors could be added in existing mechanistic models of coffee, or can be used to develop new linear mixed models to estimate yield losses. Estimated yield losses can then be related to production factors to identify corrective actions that farmers can implement to reduce losses. The experimental and modeling approaches of this study could also be applied in other perennial crops to assess yield losses. PMID:28046054

  13. Primary and Secondary Yield Losses Caused by Pests and Diseases: Assessment and Modeling in Coffee.

    PubMed

    Cerda, Rolando; Avelino, Jacques; Gary, Christian; Tixier, Philippe; Lechevallier, Esther; Allinne, Clémentine

    2017-01-01

    The assessment of crop yield losses is needed for the improvement of production systems that contribute to the incomes of rural families and food security worldwide. However, efforts to quantify yield losses and identify their causes are still limited, especially for perennial crops. Our objectives were to quantify primary yield losses (incurred in the current year of production) and secondary yield losses (resulting from negative impacts of the previous year) of coffee due to pests and diseases, and to identify the most important predictors of coffee yields and yield losses. We established an experimental coffee parcel with full-sun exposure that consisted of six treatments, which were defined as different sequences of pesticide applications. The trial lasted three years (2013-2015) and yield components, dead productive branches, and foliar pests and diseases were assessed as predictors of yield. First, we calculated yield losses by comparing actual yields of specific treatments with the estimated attainable yield obtained in plots which always had chemical protection. Second, we used structural equation modeling to identify the most important predictors. Results showed that pests and diseases led to high primary yield losses (26%) and even higher secondary yield losses (38%). We identified the fruiting nodes and the dead productive branches as the most important and useful predictors of yields and yield losses. These predictors could be added in existing mechanistic models of coffee, or can be used to develop new linear mixed models to estimate yield losses. Estimated yield losses can then be related to production factors to identify corrective actions that farmers can implement to reduce losses. The experimental and modeling approaches of this study could also be applied in other perennial crops to assess yield losses.

  14. Host plant records of the Mango Fruit Fly, Bactrocera (Bactrocera) frauenfeldi (Schiner) (Diptera: Tephritidae), version 1.0

    USDA-ARS?s Scientific Manuscript database

    Bactrocera (Bactrocera) frauenfeldi (Schiner, 1868), commonly known as the mango fruit fly, is regulated through the Plant Protection Act of 2000 (7 U.S.C. 7701-7772) and relevant Parts and Subparts of the Code of Federal Regulations (7 CFR – Agriculture). Although, to date, the USDA PestID has no i...

  15. Deletion of v-chiA from a baculovirus reduces horizontal transmission in the field

    Treesearch

    Vincent D' Amico; James Slavicek; John D. Podgwaite; Ralph Webb; Roger Fuester; Randall A. Peiffer

    2013-01-01

    Nucleopolyhedroviruses (NPVs) can initiate devastating disease outbreaks in populations of defoliating Lepidoptera, a fact that has been exploited for the purposes of biological control of some pest insects. A key part of the horizontal transmission process of NPVs is the degradation of the larval integument by virus-coded proteins called chitinases, such as V-CHIA...

  16. Genome Sequence of Acinetobacter sp. Strain HA, Isolated from the Gut of the Polyphagous Insect Pest Helicoverpa armigera

    PubMed Central

    Malhotra, Jaya; Dua, Ankita; Saxena, Anjali; Sangwan, Naseer; Mukherjee, Udita; Pandey, Neeti; Rajagopal, Raman; Khurana, Paramjit; Khurana, Jitendra P.

    2012-01-01

    In this study, Acinetobacter sp. strain HA was isolated from the midgut of a fifth-instar larva of Helicoverpa armigera. Here, we report the draft genome sequence (3,125,085 bp) of this strain that consists of 102 contigs, 2,911 predicted coding sequences, and a G+C content of 41%. PMID:22933775

  17. Spatiotemporal variability of water and energy fluxes: TERENO- prealpine hydrometeorological data analysis and inverse modeling with GEOtop and PEST

    NASA Astrophysics Data System (ADS)

    Soltani, M.; Kunstmann, H.; Laux, P.; Mauder, M.

    2016-12-01

    In mountainous and prealpine regions echohydrological processes exhibit rapid changes within short distances due to the complex orography and strong elevation gradients. Water- and energy fluxes between the land surface and the atmosphere are crucial drivers for nearly all ecosystem processes. The aim of this research is to analyze the variability of surface water- and energy fluxes by both comprehensive observational hydrometeorological data analysis and process-based high resolution hydrological modeling for a mountainous and prealpine region in Germany. We particularly focus on the closure of the observed energy balance and on the added value of energy flux observations for parameter estimation in our hydrological model (GEOtop) by inverse modeling using PEST. Our study area is the catchment of the river Rott (55 km2), being part of the TERENO prealpine observatory in Southern Germany, and we focus particularly on the observations during the summer episode May to July 2013. We present the coupling of GEOtop and the parameter estimation tool PEST, which is based on the Gauss-Marquardt-Levenberg method, a gradient-based nonlinear parameter estimation algorithm. Estimation of the surface energy partitioning during the data analysis process revealed that the latent heat flux was considered as the main consumer of available energy. The relative imbalance was largest during nocturnal periods. An energy imbalance was observed at the eddy-covariance site Fendt due to either underestimated turbulent fluxes or overestimated available energy. The calculation of the simulated energy and water balances for the entire catchment indicated that 78% of net radiation leaves the catchment as latent heat flux, 17% as sensible heat, and 5% enters the soil in the form of soil heat flux. 45% of the catchment aggregated precipitation leaves the catchment as discharge and 55% as evaporation. Using the developed GEOtop-PEST interface, the hydrological model is calibrated by comparing simulated and observed discharge, soil moisture and -temperature, sensible-, latent-, and soil heat fluxes. A reasonable quality of fit could be achieved. Uncertainty- and covariance analyses are performed, allowing the derivation of confidence intervals for all estimated parameters.

  18. A Keystone Ant Species Provides Robust Biological Control of the Coffee Berry Borer Under Varying Pest Densities.

    PubMed

    Morris, Jonathan R; Vandermeer, John; Perfecto, Ivette

    2015-01-01

    Species' functional traits are an important part of the ecological complexity that determines the provisioning of ecosystem services. In biological pest control, predator response to pest density variation is a dynamic trait that impacts the provision of this service in agroecosystems. When pest populations fluctuate, farmers relying on biocontrol services need to know how natural enemies respond to these changes. Here we test the effect of variation in coffee berry borer (CBB) density on the biocontrol efficiency of a keystone ant species (Azteca sericeasur) in a coffee agroecosystem. We performed exclosure experiments to measure the infestation rate of CBB released on coffee branches in the presence and absence of ants at four different CBB density levels. We measured infestation rate as the number of CBB bored into fruits after 24 hours, quantified biocontrol efficiency (BCE) as the proportion of infesting CBB removed by ants, and estimated functional response from ant attack rates, measured as the difference in CBB infestation between branches. Infestation rates of CBB on branches with ants were significantly lower (71%-82%) than on those without ants across all density levels. Additionally, biocontrol efficiency was generally high and did not significantly vary across pest density treatments. Furthermore, ant attack rates increased linearly with increasing CBB density, suggesting a Type I functional response. These results demonstrate that ants can provide robust biological control of CBB, despite variation in pest density, and that the response of predators to pest density variation is an important factor in the provision of biocontrol services. Considering how natural enemies respond to changes in pest densities will allow for more accurate biocontrol predictions and better-informed management of this ecosystem service in agroecosystems.

  19. A Keystone Ant Species Provides Robust Biological Control of the Coffee Berry Borer Under Varying Pest Densities

    PubMed Central

    Morris, Jonathan R.; Vandermeer, John; Perfecto, Ivette

    2015-01-01

    Species’ functional traits are an important part of the ecological complexity that determines the provisioning of ecosystem services. In biological pest control, predator response to pest density variation is a dynamic trait that impacts the provision of this service in agroecosystems. When pest populations fluctuate, farmers relying on biocontrol services need to know how natural enemies respond to these changes. Here we test the effect of variation in coffee berry borer (CBB) density on the biocontrol efficiency of a keystone ant species (Azteca sericeasur) in a coffee agroecosystem. We performed exclosure experiments to measure the infestation rate of CBB released on coffee branches in the presence and absence of ants at four different CBB density levels. We measured infestation rate as the number of CBB bored into fruits after 24 hours, quantified biocontrol efficiency (BCE) as the proportion of infesting CBB removed by ants, and estimated functional response from ant attack rates, measured as the difference in CBB infestation between branches. Infestation rates of CBB on branches with ants were significantly lower (71%-82%) than on those without ants across all density levels. Additionally, biocontrol efficiency was generally high and did not significantly vary across pest density treatments. Furthermore, ant attack rates increased linearly with increasing CBB density, suggesting a Type I functional response. These results demonstrate that ants can provide robust biological control of CBB, despite variation in pest density, and that the response of predators to pest density variation is an important factor in the provision of biocontrol services. Considering how natural enemies respond to changes in pest densities will allow for more accurate biocontrol predictions and better-informed management of this ecosystem service in agroecosystems. PMID:26562676

  20. The Behavioral Type of a Top Predator Drives the Short-Term Dynamic of Intraguild Predation.

    PubMed

    Michalko, Radek; Pekár, Stano

    2017-03-01

    Variation in behavior among individual top predators (i.e., the behavioral type) can strongly shape pest suppression in intraguild predation (IGP). However, the effect of a top predator's behavioral type-namely, foraging aggressiveness (number of killed divided by prey time) and prey choosiness (preference degree for certain prey type)-on the dynamic of IGP may interact with the relative abundances of top predator, mesopredator, and pest. We investigated the influence of the top predator's behavioral type on the dynamic of IGP in a three-species system with a top predator spider, a mesopredator spider, and a psyllid pest using a simulation model. The model parameters were estimated from laboratory experiments and field observations. The top predator's behavioral type altered the food-web dynamics in a context-dependent manner. The system with an aggressive/nonchoosy top predator, without prey preferences between pest and mesopredator, suppressed the pest more when the top predator to mesopredator abundance ratio was high. In contrast, the system with a timid/choosy top predator that preferred the pest to the mesopredator was more effective when the ratio was low. Our results show that the behavioral types and abundances of interacting species need to be considered together when studying food-web dynamics, because they evidently interact. To improve biocontrol efficiency of predators, research on the alteration of their behavioral types is needed.

  1. Estimating the effect of plant-provided food supplements on pest consumption by omnivorous predators: lessons from two coccinellid beetles.

    PubMed

    Schuldiner-Harpaz, Tarryn; Coll, Moshe

    2017-05-01

    Plant-provided food supplements can influence biological pest control by omnivorous predators in two counteracting ways: they can (i) enhance predator populations, but (ii) reduce pest consumption by individual predators. Yet the majority of studies address only one of these aspects. Here, we first tested the influence of canola (Brassica napus L.) pollen supplements on the life history of two ladybeetle species: Hoppodamia variegata (Goeze) and Coccinella septempunctata (L.). We then developed a theoretical model to simulate total pest consumption in the presence and absence of pollen supplements. Supplementing a prey diet with canola pollen increased H. variegata larval survival from 50 to 82%, and C. septempunctata female oviposition by 1.6-fold. Model simulations revealed a greater benefit of pollen supplements when relying on C. septempunctata for pest suppression than on H. variegata. For these two predators, the tested pollen serves as an essential supplement to a diet of prey. However, the benefit of a mixed prey-pollen diet was not always sufficient to overcome individual decrease in pest consumption. Taken together, our study highlights the importance of addressing both positive and negative roles of plant-provided food supplements in considering the outcome for biological control efforts that rely on omnivorous predators. © 2016 Society of Chemical Industry. © 2016 Society of Chemical Industry.

  2. Impact of pest control strategies on the arthropodofauna living in bird nests built in nestboxes in pear and apple orchards.

    PubMed

    Roy, Lise; Bouvier, Jean-Charles; Lavigne, Claire; Galès, Mathieu; Buronfosse, Thierry

    2013-08-01

    Pesticide applications have a strong impact on biodiversity in agroecosystems. The present study aimed to assess the impact of pest control strategies on the arthropodofauna of Parus major nests built within nestboxes installed in orchards. Unlike many studied groups, these arthropod communities are not in direct contact with pesticide sprays (on account of their being sheltered by nestboxes) and are also unable to move away from the treated area. In this pilot study, we estimated the prevalence and the taxonomic and ecological diversities of arthropodofauna sampled in the nests and assessed the extent to which the whole and nest-specific arthropodofauna were affected by pest control strategies. Sixteen different insect and arachnid Primary Taxonomic Groups (PTGs, order level or below) were found in nests. The best represented PTGs (≥10% occurrence in years 2007 and 2008) were Psocoptera (Insecta, detritivorous/saprophagous), detritivorous/saprophagous Astigmata (Acari) and hematophagous Mesostigmata (Acari). Pest control strategies had a large impact on the prevalence of arthropods in nests, with higher proportions of nests hosting arthropods in organic orchards than in conventional orchards and with intermediate proportions in nests in Integrated Pest Management orchards. In contrast, pest control strategies had no significant effect on the composition of the arthropod communities when only nests hosting nidicolous arthropods were considered.

  3. Environmental risk assessment for plant pests: a procedure to evaluate their impacts on ecosystem services.

    PubMed

    Gilioli, G; Schrader, G; Baker, R H A; Ceglarska, E; Kertész, V K; Lövei, G; Navajas, M; Rossi, V; Tramontini, S; van Lenteren, J C

    2014-01-15

    The current methods to assess the environmental impacts of plant pests differ in their approaches and there is a lack of the standardized procedures necessary to provide accurate and consistent results, demonstrating the complexity of developing a commonly accepted scheme for this purpose. By including both the structural and functional components of the environment threatened by invasive alien species (IAS), in particular plant pests, we propose an environmental risk assessment scheme that addresses this complexity. Structural components are investigated by evaluating the impacts of the plant pest on genetic, species and landscape diversity. Functional components are evaluated by estimating how plant pests modify ecosystem services in order to determine the extent to which an IAS changes the functional traits that influence ecosystem services. A scenario study at a defined spatial and temporal resolution is then used to explore how an IAS, as an exogenous driving force, may trigger modifications in the target environment. The method presented here provides a standardized approach to generate comparable and reproducible results for environmental risk assessment as a component of Pest Risk Analysis. The method enables the assessment of overall environmental risk which integrates the impacts on different components of the environment and their probabilities of occurrence. The application of the proposed scheme is illustrated by evaluating the environmental impacts of the invasive citrus long-horn beetle, Anoplophora chinensis. © 2013.

  4. Bifunctional Anti-Huntingtin Proteasome-Directed Intrabodies Mediate Efficient Degradation of Mutant Huntingtin Exon 1 Protein Fragments

    PubMed Central

    Butler, David C.; Messer, Anne

    2011-01-01

    Huntington's disease (HD) is a fatal autosomal dominant neurodegenerative disorder caused by a trinucleotide (CAG)n repeat expansion in the coding sequence of the huntingtin gene, and an expanded polyglutamine (>37Q) tract in the protein. This results in misfolding and accumulation of huntingtin protein (htt), formation of neuronal intranuclear and cytoplasmic inclusions, and neuronal dysfunction/degeneration. Single-chain Fv antibodies (scFvs), expressed as intrabodies that bind htt and prevent aggregation, show promise as immunotherapeutics for HD. Intrastriatal delivery of anti-N-terminal htt scFv-C4 using an adeno-associated virus vector (AAV2/1) significantly reduces the size and number of aggregates in HDR6/1 transgenic mice; however, this protective effect diminishes with age and time after injection. We therefore explored enhancing intrabody efficacy via fusions to heterologous functional domains. Proteins containing a PEST motif are often targeted for proteasomal degradation and generally have a short half life. In ST14A cells, fusion of the C-terminal PEST region of mouse ornithine decarboxylase (mODC) to scFv-C4 reduces htt exon 1 protein fragments with 72 glutamine repeats (httex1-72Q) by ∼80–90% when compared to scFv-C4 alone. Proteasomal targeting was verified by either scrambling the mODC-PEST motif, or via proteasomal inhibition with epoxomicin. For these constructs, the proteasomal degradation of the scFv intrabody proteins themselves was reduced<25% by the addition of the mODC-PEST motif, with or without antigens. The remaining intrabody levels were amply sufficient to target N-terminal httex1-72Q protein fragment turnover. Critically, scFv-C4-PEST prevents aggregation and toxicity of httex1-72Q fragments at significantly lower doses than scFv-C4. Fusion of the mODC-PEST motif to intrabodies is a valuable general approach to specifically target toxic antigens to the proteasome for degradation. PMID:22216210

  5. A suite of models to support the quantitative assessment of spread in pest risk analysis.

    PubMed

    Robinet, Christelle; Kehlenbeck, Hella; Kriticos, Darren J; Baker, Richard H A; Battisti, Andrea; Brunel, Sarah; Dupin, Maxime; Eyre, Dominic; Faccoli, Massimo; Ilieva, Zhenya; Kenis, Marc; Knight, Jon; Reynaud, Philippe; Yart, Annie; van der Werf, Wopke

    2012-01-01

    Pest Risk Analyses (PRAs) are conducted worldwide to decide whether and how exotic plant pests should be regulated to prevent invasion. There is an increasing demand for science-based risk mapping in PRA. Spread plays a key role in determining the potential distribution of pests, but there is no suitable spread modelling tool available for pest risk analysts. Existing models are species specific, biologically and technically complex, and data hungry. Here we present a set of four simple and generic spread models that can be parameterised with limited data. Simulations with these models generate maps of the potential expansion of an invasive species at continental scale. The models have one to three biological parameters. They differ in whether they treat spatial processes implicitly or explicitly, and in whether they consider pest density or pest presence/absence only. The four models represent four complementary perspectives on the process of invasion and, because they have different initial conditions, they can be considered as alternative scenarios. All models take into account habitat distribution and climate. We present an application of each of the four models to the western corn rootworm, Diabrotica virgifera virgifera, using historic data on its spread in Europe. Further tests as proof of concept were conducted with a broad range of taxa (insects, nematodes, plants, and plant pathogens). Pest risk analysts, the intended model users, found the model outputs to be generally credible and useful. The estimation of parameters from data requires insights into population dynamics theory, and this requires guidance. If used appropriately, these generic spread models provide a transparent and objective tool for evaluating the potential spread of pests in PRAs. Further work is needed to validate models, build familiarity in the user community and create a database of species parameters to help realize their potential in PRA practice.

  6. A Suite of Models to Support the Quantitative Assessment of Spread in Pest Risk Analysis

    PubMed Central

    Robinet, Christelle; Kehlenbeck, Hella; Kriticos, Darren J.; Baker, Richard H. A.; Battisti, Andrea; Brunel, Sarah; Dupin, Maxime; Eyre, Dominic; Faccoli, Massimo; Ilieva, Zhenya; Kenis, Marc; Knight, Jon; Reynaud, Philippe; Yart, Annie; van der Werf, Wopke

    2012-01-01

    Pest Risk Analyses (PRAs) are conducted worldwide to decide whether and how exotic plant pests should be regulated to prevent invasion. There is an increasing demand for science-based risk mapping in PRA. Spread plays a key role in determining the potential distribution of pests, but there is no suitable spread modelling tool available for pest risk analysts. Existing models are species specific, biologically and technically complex, and data hungry. Here we present a set of four simple and generic spread models that can be parameterised with limited data. Simulations with these models generate maps of the potential expansion of an invasive species at continental scale. The models have one to three biological parameters. They differ in whether they treat spatial processes implicitly or explicitly, and in whether they consider pest density or pest presence/absence only. The four models represent four complementary perspectives on the process of invasion and, because they have different initial conditions, they can be considered as alternative scenarios. All models take into account habitat distribution and climate. We present an application of each of the four models to the western corn rootworm, Diabrotica virgifera virgifera, using historic data on its spread in Europe. Further tests as proof of concept were conducted with a broad range of taxa (insects, nematodes, plants, and plant pathogens). Pest risk analysts, the intended model users, found the model outputs to be generally credible and useful. The estimation of parameters from data requires insights into population dynamics theory, and this requires guidance. If used appropriately, these generic spread models provide a transparent and objective tool for evaluating the potential spread of pests in PRAs. Further work is needed to validate models, build familiarity in the user community and create a database of species parameters to help realize their potential in PRA practice. PMID:23056174

  7. Modelling the Geographical Range of a Species with Variable Life-History

    PubMed Central

    Macfadyen, Sarina; Kriticos, Darren J.

    2012-01-01

    We show how a climatic niche model can be used to describe the potential geographic distribution of a pest species with variable life-history, and illustrate how to estimate biogeographic pest threats that vary across space. The models were used to explore factors that affect pest risk (irrigation and presences of host plant). A combination of current distribution records and published experimental data were used to construct separate models for the asexual and sexual lineages of Rhopalosiphum padi (Linnaeus) (Hemiptera: Aphididae). The two models were combined with knowledge of host plant presence to classify the global pest risk posed by R. padi. Whilst R. padi has a relatively limited area in which sexual lineages can persist year round, a much larger area is suitable for transient sexual and asexual lineages to exist. The greatest risk of establishment of persistent sexual and asexual populations is in areas with warm temperate climates. At the global scale the models show very little difference in risk patterns between natural rainfall and irrigation scenarios, but in Australia, the amount of land suitable for persistent asexual and transient sexual populations decreases (by 20%) if drought stress is no longer alleviated by irrigation. This approach proved useful for modelling the potential distribution of a species that has a variable life-history. We were able to use the model outputs to examine factors such as irrigation practices and host plant presence that altered the nature (transient or permanent) and extent of pest risk. The composite niche maps indicate pest risk in terms that are useful to both biosecurity agencies and pest managers. PMID:22808133

  8. Pumping Test Determination of Unsaturated Aquifer Properties

    NASA Astrophysics Data System (ADS)

    Mishra, P. K.; Neuman, S. P.

    2008-12-01

    Tartakovsky and Neuman [2007] presented a new analytical solution for flow to a partially penetrating well pumping at a constant rate from a compressible unconfined aquifer considering the unsaturated zone. In their solution three-dimensional, axially symmetric unsaturated flow is described by a linearized version of Richards' equation in which both hydraulic conductivity and water content vary exponentially with incremental capillary pressure head relative to its air entry value, the latter defining the interface between the saturated and unsaturated zones. Both exponential functions are characterized by a common exponent k having the dimension of inverse length, or equivalently a dimensionless exponent kd=kb where b is initial saturated thickness. The authors used their solution to analyze drawdown data from a pumping test conducted by Moench et al. [2001] in a Glacial Outwash Deposit at Cape Cod, Massachusetts. Their analysis yielded estimates of horizontal and vertical saturated hydraulic conductivities, specific storage, specific yield and k . Recognizing that hydraulic conductivity and water content seldom vary identically with incremental capillary pressure head, as assumed by Tartakovsky and Neuman [2007], we note that k is at best an effective rather than a directly measurable soil parameter. We therefore ask to what extent does interpretation of a pumping test based on the Tartakovsky-Neuman solution allow estimating aquifer unsaturated parameters as described by more common constitutive water retention and relative hydraulic conductivity models such as those of Brooks and Corey [1964] or van Genuchten [1980] and Mualem [1976a]? We address this question by showing how may be used to estimate the capillary air entry pressure head k and the parameters of such constitutive models directly, without a need for inverse unsaturated numerical simulations of the kind described by Moench [2003]. To assess the validity of such direct estimates we use maximum likelihood- based model selection criteria to compare the abilities of numerical models based on the STOMP code to reproduce observed drawdowns during the test when saturated and unsaturated aquifer parameters are estimated either in the above manner or by means of the inverse code PEST.

  9. Estimating economic thresholds for pest control: an alternative procedure.

    PubMed

    Ramirez, O A; Saunders, J L

    1999-04-01

    An alternative methodology to determine profit maximizing economic thresholds is developed and illustrated. An optimization problem based on the main biological and economic relations involved in determining a profit maximizing economic threshold is first advanced. From it, a more manageable model of 2 nonsimultaneous reduced-from equations is derived, which represents a simpler but conceptually and statistically sound alternative. The model recognizes that yields and pest control costs are a function of the economic threshold used. Higher (less strict) economic thresholds can result in lower yields and, therefore, a lower gross income from the sale of the product, but could also be less costly to maintain. The highest possible profits will be obtained by using the economic threshold that results in a maximum difference between gross income and pest control cost functions.

  10. Nitrous oxide emissions from cropland: a procedure for calibrating the DayCent biogeochemical model using inverse modelling

    USGS Publications Warehouse

    Rafique, Rashad; Fienen, Michael N.; Parkin, Timothy B.; Anex, Robert P.

    2013-01-01

    DayCent is a biogeochemical model of intermediate complexity widely used to simulate greenhouse gases (GHG), soil organic carbon and nutrients in crop, grassland, forest and savannah ecosystems. Although this model has been applied to a wide range of ecosystems, it is still typically parameterized through a traditional “trial and error” approach and has not been calibrated using statistical inverse modelling (i.e. algorithmic parameter estimation). The aim of this study is to establish and demonstrate a procedure for calibration of DayCent to improve estimation of GHG emissions. We coupled DayCent with the parameter estimation (PEST) software for inverse modelling. The PEST software can be used for calibration through regularized inversion as well as model sensitivity and uncertainty analysis. The DayCent model was analysed and calibrated using N2O flux data collected over 2 years at the Iowa State University Agronomy and Agricultural Engineering Research Farms, Boone, IA. Crop year 2003 data were used for model calibration and 2004 data were used for validation. The optimization of DayCent model parameters using PEST significantly reduced model residuals relative to the default DayCent parameter values. Parameter estimation improved the model performance by reducing the sum of weighted squared residual difference between measured and modelled outputs by up to 67 %. For the calibration period, simulation with the default model parameter values underestimated mean daily N2O flux by 98 %. After parameter estimation, the model underestimated the mean daily fluxes by 35 %. During the validation period, the calibrated model reduced sum of weighted squared residuals by 20 % relative to the default simulation. Sensitivity analysis performed provides important insights into the model structure providing guidance for model improvement.

  11. Accuracy Analysis and Parameters Optimization in Urban Flood Simulation by PEST Model

    NASA Astrophysics Data System (ADS)

    Keum, H.; Han, K.; Kim, H.; Ha, C.

    2017-12-01

    The risk of urban flooding has been increasing due to heavy rainfall, flash flooding and rapid urbanization. Rainwater pumping stations, underground reservoirs are used to actively take measures against flooding, however, flood damage from lowlands continues to occur. Inundation in urban areas has resulted in overflow of sewer. Therefore, it is important to implement a network system that is intricately entangled within a city, similar to the actual physical situation and accurate terrain due to the effects on buildings and roads for accurate two-dimensional flood analysis. The purpose of this study is to propose an optimal scenario construction procedure watershed partitioning and parameterization for urban runoff analysis and pipe network analysis, and to increase the accuracy of flooded area prediction through coupled model. The establishment of optimal scenario procedure was verified by applying it to actual drainage in Seoul. In this study, optimization was performed by using four parameters such as Manning's roughness coefficient for conduits, watershed width, Manning's roughness coefficient for impervious area, Manning's roughness coefficient for pervious area. The calibration range of the parameters was determined using the SWMM manual and the ranges used in the previous studies, and the parameters were estimated using the automatic calibration method PEST. The correlation coefficient showed a high correlation coefficient for the scenarios using PEST. The RPE and RMSE also showed high accuracy for the scenarios using PEST. In the case of RPE, error was in the range of 13.9-28.9% in the no-parameter estimation scenarios, but in the scenario using the PEST, the error range was reduced to 6.8-25.7%. Based on the results of this study, it can be concluded that more accurate flood analysis is possible when the optimum scenario is selected by determining the appropriate reference conduit for future urban flooding analysis and if the results is applied to various rainfall event scenarios and parameter optimization. Keywords: Parameters Optimization; PEST model; Urban area Acknowledgement This research was supported by a grant (17AWMP-B079625-04) from Water Management Research Program funded by Ministry of Land, Infrastructure and Transport of Korean government.

  12. Field performance of a genetically engineered strain of pink bollworm.

    PubMed

    Simmons, Gregory S; McKemey, Andrew R; Morrison, Neil I; O'Connell, Sinead; Tabashnik, Bruce E; Claus, John; Fu, Guoliang; Tang, Guolei; Sledge, Mickey; Walker, Adam S; Phillips, Caroline E; Miller, Ernie D; Rose, Robert I; Staten, Robert T; Donnelly, Christl A; Alphey, Luke

    2011-01-01

    Pest insects harm crops, livestock and human health, either directly or by acting as vectors of disease. The Sterile Insect Technique (SIT)--mass-release of sterile insects to mate with, and thereby control, their wild counterparts--has been used successfully for decades to control several pest species, including pink bollworm, a lepidopteran pest of cotton. Although it has been suggested that genetic engineering of pest insects provides potential improvements, there is uncertainty regarding its impact on their field performance. Discrimination between released and wild moths caught in monitoring traps is essential for estimating wild population levels. To address concerns about the reliability of current marking methods, we developed a genetically engineered strain of pink bollworm with a heritable fluorescent marker, to improve discrimination of sterile from wild moths. Here, we report the results of field trials showing that this engineered strain performed well under field conditions. Our data show that attributes critical to SIT in the field--ability to find a mate and to initiate copulation, as well as dispersal and persistence in the release area--were comparable between the genetically engineered strain and a standard strain. To our knowledge, these represent the first open-field experiments with a genetically engineered insect. The results described here provide encouragement for the genetic control of insect pests.

  13. Whole Genome Sequencing of the Braconid Parasitoid Wasp Fopius arisanus, an Important Biocontrol Agent of Pest Tepritid Fruit Flies

    PubMed Central

    Geib, Scott M.; Liang, Guang Hong; Murphy, Terence D.; Sim, Sheina B.

    2017-01-01

    The braconid wasp Fopius arisanus (Sonan) is an important biological control agent of tropical and subtropical pest fruit flies, including two important global pests, the Mediterranean fruit fly (Ceratitis capitata), and the oriental fruit fly (Bactrocera dorsalis). The goal of this study was to develop foundational genomic resources for this species to provide tools that can be used to answer questions exploring the multitrophic interactions between the host and parasitoid in this important research system. Here, we present a whole genome assembly of F. arisanus, derived from a pool of haploid offspring from a single unmated female. The genome is ∼154 Mb in size, with a N50 contig and scaffold size of 51,867 bp and 0.98 Mb, respectively. Utilizing existing RNA-Seq data for this species, as well as publicly available peptide sequences from related Hymenoptera, a high quality gene annotation set, which includes 10,991 protein coding genes, was generated. Prior to this assembly submission, no RefSeq proteins were present for this species. Parasitic wasps play an important role in a diverse ecosystem as well as a role in biological control of agricultural pests. This whole genome assembly and annotation data represents the first genome-scale assembly for this species or any closely related Opiine, and are publicly available in the National Center for Biotechnology Information Genome and RefSeq databases, providing a much needed genomic resource for this hymenopteran group. PMID:28584080

  14. Direct and indirect impacts of integrated pest management on pesticide use: a case of rice agriculture in Java, Indonesia.

    PubMed

    Mariyono, Joko

    2008-10-01

    Integrated pest management (IPM) technology has been disseminated since 1989 in Indonesia to cut down pesticide use, but the adoption and diffusion of the technology are still debated. This study aims to estimate the models of demand for pesticides and to analyse the impact of IPM technology on pesticide use. Aggregate cross-section time series data from 1990-1998 are used. The results show that IPM technology reduces the use of pesticides by improving the process of rice production, such that pesticides are more efficiently used. In this case, the IPM technology is not a pest control technique. CONCLUSION There is an indication that IPM technology has been adopted by farmers. This is evidence that the IPM programme in Indonesia was successful in this area.

  15. A new attractant for monitoring western flower thrips, Frankliniella occidentalis in protected crops.

    PubMed

    Abdullah, Zayed S; Greenfield, Bethany Pj; Ficken, Katherine J; Taylor, James Wd; Wood, Martyn; Butt, Tariq M

    2015-01-01

    Monitoring of pest populations is an essential component of integrated pest management. An early warning system helps growers decide when best to take control measures, or when to alter them, should a control method prove inadequate. Studies have shown that adding chemical attractants to sticky cards can increase trap catch of western flower thrips, Frankliniella occidentalis, a global pest of agriculture and horticulture, giving more accurate accounts of population size and dynamics, thus leading to more efficient monitoring. We identify a novel semiochemical to the species, (S)-(-)-verbenone, showing that addition of this compound to sticky traps significantly increased F. occidentalis catch in two geographically distinct populations, infesting two unrelated crops of global economic importance. We validate through field trials that (S)-(-)-verbenone is highly attractive to F.occidentalis and can be used with blue sticky traps to enhance trap catch, leading to better estimations of pest population densities. The compound may be used in other control methods against F.occidentalis such as lure and kill, mass trapping and push-pull.

  16. Transgenic rice expressing Allium sativum leaf agglutinin (ASAL) exhibits high-level resistance against major sap-sucking pests

    PubMed Central

    Yarasi, Bharathi; Sadumpati, Vijayakumar; Immanni, China Pasalu; Vudem, Dasavantha Reddy; Khareedu, Venkateswara Rao

    2008-01-01

    Background Rice (Oryza sativa) productivity is adversely impacted by numerous biotic and abiotic factors. An approximate 52% of the global production of rice is lost annually owing to the damage caused by biotic factors, of which ~21% is attributed to the attack of insect pests. In this paper we report the isolation, cloning and characterization of Allium sativum leaf agglutinin (asal) gene, and its expression in elite indica rice cultivars using Agrobacterium-mediated genetic transformation method. The stable transgenic lines, expressing ASAL, showed explicit resistance against major sap-sucking pests. Results Allium sativum leaf lectin gene (asal), coding for mannose binding homodimeric protein (ASAL) from garlic plants, has been isolated and introduced into elite indica rice cultivars susceptible to sap-sucking insects, viz., brown planthopper (BPH), green leafhopper (GLH) and whitebacked planthopper (WBPH). Embryogenic calli of rice were co-cultivated with Agrobacterium harbouring pSB111 super-binary vector comprising garlic lectin gene asal along with the herbicide resistance gene bar, both under the control of CaMV35S promoter. PCR and Southern blot analyses confirmed stable integration of transgenes into the genomes of rice plants. Northern and western blot analyses revealed expression of ASAL in different transgenic rice lines. In primary transformants, the level of ASAL protein, as estimated by enzyme-linked immunosorbent assay, varied between 0.74% and 1.45% of the total soluble proteins. In planta insect bioassays on transgenic rice lines revealed potent entomotoxic effects of ASAL on BPH, GLH and WBPH insects, as evidenced by significant decreases in the survival, development and fecundity of the insects. Conclusion In planta insect bioassays were carried out on asal transgenic rice lines employing standard screening techniques followed in conventional breeding for selection of insect resistant plants. The ASAL expressing rice plants, bestowed with high entomotoxic effects, imparted appreciable resistance against three major sap-sucking insects. Our results amply demonstrate that transgenic indica rice harbouring asal exhibit surpassing resistance against BPH, GLH and WBPH insects. The prototypic asal transgenic rice lines appear promising for direct commercial cultivation besides serving as a potential genetic resource in recombination breeding. PMID:18854007

  17. Transgenic rice expressing Allium sativum leaf agglutinin (ASAL) exhibits high-level resistance against major sap-sucking pests.

    PubMed

    Yarasi, Bharathi; Sadumpati, Vijayakumar; Immanni, China Pasalu; Vudem, Dasavantha Reddy; Khareedu, Venkateswara Rao

    2008-10-14

    Rice (Oryza sativa) productivity is adversely impacted by numerous biotic and abiotic factors. An approximate 52% of the global production of rice is lost annually owing to the damage caused by biotic factors, of which approximately 21% is attributed to the attack of insect pests. In this paper we report the isolation, cloning and characterization of Allium sativum leaf agglutinin (asal) gene, and its expression in elite indica rice cultivars using Agrobacterium-mediated genetic transformation method. The stable transgenic lines, expressing ASAL, showed explicit resistance against major sap-sucking pests. Allium sativum leaf lectin gene (asal), coding for mannose binding homodimeric protein (ASAL) from garlic plants, has been isolated and introduced into elite indica rice cultivars susceptible to sap-sucking insects, viz., brown planthopper (BPH), green leafhopper (GLH) and whitebacked planthopper (WBPH). Embryogenic calli of rice were co-cultivated with Agrobacterium harbouring pSB111 super-binary vector comprising garlic lectin gene asal along with the herbicide resistance gene bar, both under the control of CaMV35S promoter. PCR and Southern blot analyses confirmed stable integration of transgenes into the genomes of rice plants. Northern and western blot analyses revealed expression of ASAL in different transgenic rice lines. In primary transformants, the level of ASAL protein, as estimated by enzyme-linked immunosorbent assay, varied between 0.74% and 1.45% of the total soluble proteins. In planta insect bioassays on transgenic rice lines revealed potent entomotoxic effects of ASAL on BPH, GLH and WBPH insects, as evidenced by significant decreases in the survival, development and fecundity of the insects. In planta insect bioassays were carried out on asal transgenic rice lines employing standard screening techniques followed in conventional breeding for selection of insect resistant plants. The ASAL expressing rice plants, bestowed with high entomotoxic effects, imparted appreciable resistance against three major sap-sucking insects. Our results amply demonstrate that transgenic indica rice harbouring asal exhibit surpassing resistance against BPH, GLH and WBPH insects. The prototypic asal transgenic rice lines appear promising for direct commercial cultivation besides serving as a potential genetic resource in recombination breeding.

  18. Genome sequencing of the sweetpotato whitefly Bemisia tabaci MED/Q.

    PubMed

    Xie, Wen; Chen, Chunhai; Yang, Zezhong; Guo, Litao; Yang, Xin; Wang, Dan; Chen, Ming; Huang, Jinqun; Wen, Yanan; Zeng, Yang; Liu, Yating; Xia, Jixing; Tian, Lixia; Cui, Hongying; Wu, Qingjun; Wang, Shaoli; Xu, Baoyun; Li, Xianchun; Tan, Xinqiu; Ghanim, Murad; Qiu, Baoli; Pan, Huipeng; Chu, Dong; Delatte, Helene; Maruthi, M N; Ge, Feng; Zhou, Xueping; Wang, Xiaowei; Wan, Fanghao; Du, Yuzhou; Luo, Chen; Yan, Fengming; Preisser, Evan L; Jiao, Xiaoguo; Coates, Brad S; Zhao, Jinyang; Gao, Qiang; Xia, Jinquan; Yin, Ye; Liu, Yong; Brown, Judith K; Zhou, Xuguo Joe; Zhang, Youjun

    2017-05-01

    The sweetpotato whitefly Bemisia tabaci is a highly destructive agricultural and ornamental crop pest. It damages host plants through both phloem feeding and vectoring plant pathogens. Introductions of B. tabaci are difficult to quarantine and eradicate because of its high reproductive rates, broad host plant range, and insecticide resistance. A total of 791 Gb of raw DNA sequence from whole genome shotgun sequencing, and 13 BAC pooling libraries were generated by Illumina sequencing using different combinations of mate-pair and pair-end libraries. Assembly gave a final genome with a scaffold N50 of 437 kb, and a total length of 658 Mb. Annotation of repetitive elements and coding regions resulted in 265.0 Mb TEs (40.3%) and 20 786 protein-coding genes with putative gene family expansions, respectively. Phylogenetic analysis based on orthologs across 14 arthropod taxa suggested that MED/Q is clustered into a hemipteran clade containing A. pisum and is a sister lineage to a clade containing both R. prolixus and N. lugens. Genome completeness, as estimated using the CEGMA and Benchmarking Universal Single-Copy Orthologs pipelines, reached 96% and 79%. These MED/Q genomic resources lay a foundation for future 'pan-genomic' comparisons of invasive vs. noninvasive, invasive vs. invasive, and native vs. exotic Bemisia, which, in return, will open up new avenues of investigation into whitefly biology, evolution, and management. © The Author 2017. Published by Oxford University Press.

  19. Linking Climate Suitability, Spread Rates and Host-Impact When Estimating the Potential Costs of Invasive Pests

    PubMed Central

    Kriticos, Darren J.; Leriche, Agathe; Palmer, David J.; Cook, David C.; Brockerhoff, Eckehard G.; Stephens, Andréa E. A.; Watt, Michael S.

    2013-01-01

    Biosecurity agencies need robust bioeconomic tools to help inform policy and allocate scarce management resources. They need to estimate the potential for each invasive alien species (IAS) to create negative impacts, so that relative and absolute comparisons can be made. Using pine processionary moth (Thaumetopoea pityocampa sensu lato) as an example, these needs were met by combining species niche modelling, dispersal modelling, host impact and economic modelling. Within its native range (the Mediterranean Basin and adjacent areas), T. pityocampa causes significant defoliation of pines and serious urticating injuries to humans. Such severe impacts overseas have fuelled concerns about its potential impacts, should it be introduced to New Zealand. A stochastic bioeconomic model was used to estimate the impact of PPM invasion in terms of pine production value lost due to a hypothetical invasion of New Zealand by T. pityocampa. The bioeconomic model combines a semi-mechanistic niche model to develop a climate-related damage function, a climate-related forest growth model, and a stochastic spread model to estimate the present value (PV) of an invasion. Simulated invasions indicate that Thaumetopoea pityocampa could reduce New Zealand’s merchantable and total pine stem volume production by 30%, reducing forest production by between NZ$1,550 M to NZ$2,560 M if left untreated. Where T. pityocampa is controlled using aerial application of an insecticide, projected losses in PV were reduced, but still significant (NZ$30 M to NZ$2,210 M). The PV estimates were more sensitive to the efficacy of the spray program than the potential rate of spread of the moth. Our novel bioeconomic method provides a refined means of estimating potential impacts of invasive alien species, taking into account climatic effects on asset values, the potential for pest impacts, and pest spread rates. PMID:23405097

  20. Uncovering the economic value of natural enemies and true costs of chemical insecticides to cotton farmers in China

    NASA Astrophysics Data System (ADS)

    Huang, Jikun; Zhou, Ke; Zhang, Wei; Deng, Xiangzheng; van der Werf, Wopke; Lu, Yanhui; Wu, Kongming; Rosegrant, Mark W.

    2018-06-01

    Little empirical evidence on the economic value of biological control of pests at farm level is available to improve economic decision-making by farmers and policy makers. Using insect sampling and household survey in an integrated bio-economic analysis framework, this paper studies farmers’ crop management practices in cotton in the North China Plain, and estimates the marginal value of natural enemies and costs of chemical insecticides to farmers. Ladybeetles (mainly Harmonia axyridis, Propylea japonica, and Coccinella septempunctata), the dominant natural enemy group that controls the primary pest (aphid) in cotton in our study area, provide a significant economic benefit that is unknown to the farmers. Even at the current high levels of insecticide use, an additional ladybeetle provides an economic benefit of 0.05 CNY (almost USD 0.01) to farmers. The use of broad-spectrum insecticides by farmers is alarmingly excessive, not only undermining farmers’ cotton profitability but also inducing social costs as well as disruption of the natural pest suppression system. Doubling current ladybeetle density in cotton field could gain an estimated USD 300 million for cotton farmers in China, providing a strong economic case for policies to move the pest control system towards a more ecologically-based regime, with positive consequences for farm income and environmental health. With rising use of biological control service provided by natural enemies such as ladybeetles in cotton fields, significant falls in farmers’ insecticide use would be expected, which could raise the value of ladybeetles and other natural enemies even further. The results indicate that there is an urgent need to rationalize inputs and move forward to improved agro-ecosystem management in smallholder farming system. Raising knowledge and awareness on the costs and value of biological pest control versus insecticides among farmers and policy makers and having effective extension service, are priorities towards achieving a more ecologically-based approach to crop protection on smallholder farms.

  1. An injury equivalency system for establishing a common economic threshold for three species of rice planthoppers (Hemiptera: Delphacidae) in Taiwan.

    PubMed

    Huang, Shou-Horng; Chen, Ching-Huan; Chen, Chiou-Nan; Wu, Wen-Jer

    2013-04-01

    The economic threshold (ET) for multiple pest species that share the same injury type on host plants (feeding guild) has been proposed for decision-making in integrated management framework of many defoliating insect pests. However, only a few consider agricultural pests with sucking mouthparts. This study presents the first injury equivalency system for the feeding guild made up of three rice (Oryza sativa L.) planthopper (Hemiptera: Delphacidae) species--Nilaparvata lugens (Stål), Sogatella furcifera (Harváth), and Laodelphax striatellus (Fallén)--by using relative amount of honeydew excretion of each species. The intraspecific injury equivalent coefficient was determined; this coefficient provides an exchange rate for different developmental stages in a species. N. lugens was chosen as the standard species to obtain interspecific injury equivalents for other individuals in the guild, allowing estimates of total guild injury feasible. For extension purposes, the injury equivalency was simplified by pooling all nymphs and adults in the guild to mitigate the potential confusion resulting from uncertainty of instars or wing form. A matrix of ETs established on previous studies and incorporating changes of management cost and rice price was used and served as a control decision guide for the guild samples. The validity of the proposed injury equivalency system was tested using several field data sets, and the results are generally promising and meaningfully elevate the accuracy of estimating combined injury and damage to rice, suggesting that the proposed system is a better integrated pest management decision-making system compared with conventional practices.

  2. Line-Trapping of Codling Moth (Lepidoptera: Tortricidae): A Novel Approach to Improving the Precision of Capture Numbers in Traps Monitoring Pest Density.

    PubMed

    Adams, C G; McGhee, P S; Schenker, J H; Gut, L J; Miller, J R

    2017-08-01

    This field study of codling moth, Cydia pomonella (L.), response to single versus multiple monitoring traps baited with codlemone demonstrates that precision of a given capture number is alarmingly poor when the population is held constant by releasing moths. Captures as low as zero and as high as 12 males per single trap are to be expected where the catch mode is three. Here, we demonstrate that the frequency of false negatives and overestimated positives for codling moth trapping can be substantially reduced by employing the tactic of line-trapping, where five traps were deployed 4 m apart along a row of apple trees. Codling moth traps spaced closely competed only slightly. Therefore, deploying five traps closely in a line is a sampling technique nearly as good as deploying five traps spaced widely. But line trapping offers a substantial savings in time and therefore cost when servicing aggregated versus distributed traps. As the science of pest management matures by mastering the ability to translate capture numbers into estimates of absolute pest density, it will be important to employ a tactic like line-trapping so as to shrink the troublesome variability associated with capture numbers in single traps that thwarts accurate decisions about if and when to spray. Line-trapping might similarly increase the reliability and utility of density estimates derived from capture numbers in monitoring traps for various pest and beneficial insects. © The Authors 2017. Published by Oxford University Press on behalf of Entomological Society of America.

  3. Bed Bugs: The Australian Response

    PubMed Central

    Doggett, Stephen L.; Orton, Christopher J.; Lilly, David G.; Russell, Richard C.

    2011-01-01

    Australia has experienced a sudden and unexpected resurgence in bed bug infestations from both Cimex lectularius L. and Cimex hemipterus F. A survey in 2006 revealed that infestations had increased across the nation by an average of 4,500% since the start of the decade. In response, a multi-disciplinary approach to combat the rise of this public health pest was implemented and involved the coordinated efforts of several organizations. The key components of the strategy included the introduction of a pest management standard ‘A Code of Practice for the Control of Bed Bug Infestations in Australia’ that defines and promotes ‘best practice’ in bed bug eradication, the development of a policy and procedural guide for accommodation providers, education of stakeholders in best management practices, and research. These strategies continue to evolve with developments that lead to improvements in ‘best practice’ while bed bugs remain problematic in Australia. PMID:26467616

  4. Quantifying short-term foraging movements in a marsupial pest to improve targeted lethal control and disease surveillance.

    PubMed

    Yockney, Ivor J; Latham, M Cecilia; Rouco, Carlos; Cross, Martin L; Nugent, Graham

    2015-01-01

    In New Zealand, the introduced marsupial brushtail possum (Trichosurus vulpecula) is a pest species subject to control measures, primarily to limit its ability to transmit bovine tuberculosis (TB) to livestock and for conservation protection. To better define parameters for targeted possum control and TB surveillance, we here applied a novel approach to analyzing GPS data obtained from 44 possums fitted with radio-tracking collars, producing estimates of the animals' short-term nocturnal foraging patterns based on 1-, 3- or 5-nights' contiguous data. Studies were conducted within two semi-arid montane regions of New Zealand's South Island High Country: these regions support low-density possum populations (<2 possums/ha) in which the animals' home ranges are on average larger than in high-density populations in forested habitat. Possum foraging range width (FRW) estimates increased with increasing monitoring periods, from 150-200 m based on a single night's movement data to 300-400 m based on 5 nights' data. The largest average FRW estimates were recorded in winter and spring, and the smallest in summer. The results suggest that traps or poison-bait stations (for lethal control) or monitoring devices (for TB surveillance), set for > 3 consecutive nights at 150 m interval spacings, would likely place >95% of the possums in this type of habitat at risk of encountering these devices, year-round. Modelling control efficacy against operational expenditure, based on these estimations, identified the relative cost-effectiveness of various strategies that could be applied to a typical aerial poisoning operation, to reduce the ongoing TB vectorial risk that possums pose in the High Country regions. These habitat-specific findings are likely to be more relevant than the conventional pest control and monitoring methodologies developed for possums in their more typical forested habitat.

  5. Robustness of risk maps and survey networks to knowledge gaps about a new invasive pest.

    PubMed

    Yemshanov, Denys; Koch, Frank H; Ben-Haim, Yakov; Smith, William D

    2010-02-01

    In pest risk assessment it is frequently necessary to make management decisions regarding emerging threats under severe uncertainty. Although risk maps provide useful decision support for invasive alien species, they rarely address knowledge gaps associated with the underlying risk model or how they may change the risk estimates. Failure to recognize uncertainty leads to risk-ignorant decisions and miscalculation of expected impacts as well as the costs required to minimize these impacts. Here we use the information gap concept to evaluate the robustness of risk maps to uncertainties in key assumptions about an invading organism. We generate risk maps with a spatial model of invasion that simulates potential entries of an invasive pest via international marine shipments, their spread through a landscape, and establishment on a susceptible host. In particular, we focus on the question of how much uncertainty in risk model assumptions can be tolerated before the risk map loses its value. We outline this approach with an example of a forest pest recently detected in North America, Sirex noctilio Fabricius. The results provide a spatial representation of the robustness of predictions of S. noctilio invasion risk to uncertainty and show major geographic hotspots where the consideration of uncertainty in model parameters may change management decisions about a new invasive pest. We then illustrate how the dependency between the extent of uncertainties and the degree of robustness of a risk map can be used to select a surveillance network design that is most robust to knowledge gaps about the pest.

  6. Perceived damage and areas of needed research for wildlife pests of California agriculture.

    PubMed

    Baldwin, Roger A; Salmon, Terrell P; Schmidt, Robert H; Timm, Robert M

    2014-06-01

    Many wildlife species cause extensive damage to a variety of agricultural commodities in California, with estimates of damage in the hundreds of millions annually. Given the limited availability of resources to solve all human-wildlife conflicts, we should focus management efforts on issues that provide the greatest benefit to agricultural commodities in California. This survey provides quantitative data on research needs to better guide future efforts in developing more effective, practical and appropriate methods for managing these species. We found that ground squirrels, pocket gophers, birds, wild pigs, coyotes and voles were the most common agricultural wildlife pest species in California. The damage caused by these species could be quite high, but varied by agricultural commodity. For most species, common forms of damage included loss of crop production and direct death of the plant, although livestock depredation was the greatest concern for coyotes. Control methods used most frequently and those deemed most effective varied by pest species, although greater advancements in control methods were listed as a top research priority for all species. Collectively, the use of toxicants, biocontrol and trapping were the most preferred methods for control, but this varied by species. In general, integrated pest management practices were used to control wildlife pests, with a special preference for those approaches that were efficacious and quick and inexpensive to apply. This information and survey design should be useful in establishing research and management priorities for wildlife pest species in California and other similar regions. © 2013 International Society of Zoological Sciences, Institute of Zoology/Chinese Academy of Sciences and Wiley Publishing Asia Pty Ltd.

  7. An Ecoinformatics Approach to Field-Scale Evaluation of Insecticide Effects in California Citrus: Are Citrus Thrips and Citrus Red Mite Induced Pests?

    PubMed

    Livingston, George; Hack, Lindsey; Steinmann, Kimberly P; Grafton-Cardwell, Elizabeth E; Rosenheim, Jay A

    2018-05-28

    Experimental approaches to studying the consequences of pesticide use, including impacts on beneficial insects, are vital; however, they can be limited in scale and realism. We show that an ecoinformatics approach that leverages existing data on pesticides, pests, and beneficials across multiple fields can provide complementary insights. We do this using a multi-year dataset (2002-2013) on pesticide applications and density estimates of two pests, citrus thrips (Scirtothrips citri (Moulton [Thysanoptera: Thripidae])) and citrus red mites (Panonychus citri McGregor [Acari: Tetranychidae]), and a natural enemy (Euseius spp. predatory mites) collected from citrus groves in the San Joaquin Valley of California. Using correlative analyses, we investigated the long-term consequences of pesticide use on S. citri and P. citri population densities to evaluate the hypothesis that the pest status of these species is largely due to the disruption of natural biological control-i.e., these are induced pests. We also evaluated short-term pesticide efficacy (suppression of citrus thrips and citrus red mite populations immediately post-application) and asked if it was correlated with the suppression of Euseius predator populations. Although the short-term efficacy of different pesticides varied significantly, our dataset does not suggest that the use of citrus pesticides suppressed Euseius densities or worsened pest problems. We also find that there is no general trade-off between pesticide efficacy and pesticide risk to Eusieus, such that highly effective and minimally disruptive compounds were available to citrus growers during the studied time period.

  8. Spectral Detection of Soybean Aphid (Hemiptera: Aphididae) and Confounding Insecticide Effects in Soybean

    NASA Astrophysics Data System (ADS)

    Alves, Tavvs Micael

    Soybean aphid, Aphis glycines (Hemiptera: Aphididae) is the primary insect pest of soybean in the northcentral United States. Soybean aphid may cause stunted plants, leaf discoloration, plant death, and decrease soybean yield by 40%. Sampling plans have been developed for supporting soybean aphid management. However, growers' perception about time involved in direct insect counts has been contributing to a lower adoption of traditional pest scouting methods and may be associated with the use of prophylactic insecticide applications in soybean. Remote sensing of plant spectral (light-derived) responses to soybean aphid feeding is a promising alternative to estimate injury without direct insect counts and, thus, increase adoption and efficiency of scouting programs. This research explored the use of remote sensing of soybean reflectance for detection of soybean aphids and showed that foliar insecticides may have implications for subsequent use of soybean spectral reflectance for pest detection. (Abstract shortened by ProQuest.).

  9. Environment polluting conventional chemical control compared to an environmentally friendly IPM approach for control of diamondback moth, Plutella xylostella (L.), in China: a review.

    PubMed

    Shakeel, Muhammad; Farooq, Muhammad; Nasim, Wajid; Akram, Waseem; Khan, Fawad Zafar Ahmad; Jaleel, Waqar; Zhu, Xun; Yin, Haichen; Li, Shuzhong; Fahad, Shah; Hussain, Saddam; Chauhan, Bhagirath Singh; Jin, Fengliang

    2017-06-01

    The diamondback moth, Plutella xylostella, is recognized as a widely distributed destructive insect pest of Brassica worldwide. The management of this pest is a serious issue, and an estimated annual cost of its management has reached approximately US$4 billion. Despite the fact that chemicals are a serious threat to the environment, lots of chemicals are applied for controlling various insect pests especially P. xylostella. An overreliance on chemical control has not only led to the evolution of resistance to insecticides and to a reduction of natural enemies but also has polluted various components of water, air, and soil ecosystem. In the present scenario, there is a need to implement an environmentally friendly integrated pest management (IPM) approach with new management tactics (microbial control, biological control, cultural control, mating disruption, insecticide rotation strategies, and plant resistance) for an alternative to chemical control. The IPM approach is not only economically beneficial but also reduces the environmental and health risks. The present review synthesizes published information on the insecticide resistance against P. xylostella and emphasizes on adopting an alternative environmentally friendly IPM approach for controlling P. xylostella in China.

  10. A tool for efficient, model-independent management optimization under uncertainty

    USGS Publications Warehouse

    White, Jeremy; Fienen, Michael N.; Barlow, Paul M.; Welter, Dave E.

    2018-01-01

    To fill a need for risk-based environmental management optimization, we have developed PESTPP-OPT, a model-independent tool for resource management optimization under uncertainty. PESTPP-OPT solves a sequential linear programming (SLP) problem and also implements (optional) efficient, “on-the-fly” (without user intervention) first-order, second-moment (FOSM) uncertainty techniques to estimate model-derived constraint uncertainty. Combined with a user-specified risk value, the constraint uncertainty estimates are used to form chance-constraints for the SLP solution process, so that any optimal solution includes contributions from model input and observation uncertainty. In this way, a “single answer” that includes uncertainty is yielded from the modeling analysis. PESTPP-OPT uses the familiar PEST/PEST++ model interface protocols, which makes it widely applicable to many modeling analyses. The use of PESTPP-OPT is demonstrated with a synthetic, integrated surface-water/groundwater model. The function and implications of chance constraints for this synthetic model are discussed.

  11. On estimating the economic value of insectivorous bats: Prospects and priorities for biologists

    USGS Publications Warehouse

    Boyles, Justin G.; Sole, Catherine L.; Cryan, Paul M.; McCracken, Gary F.

    2013-01-01

    Bats are among the most economically important nondomesticated mammals in the world. They are well-known pollinators and seed dispersers, but crop pest suppression is probably the most valuable ecosystem service provided by bats. Scientific literature and popular media often include reports of crop pests in the diet of bats and anecdotal or extrapolated estimates of how many insects are eaten by bats. However, quantitative estimates of the ecosystem services provided by bats in agricultural systems are rare, and the few estimates that are available are limited to a single cotton-dominated system in Texas. Despite the tremendous value for conservation and economic security of such information, surprisingly few scientific efforts have been dedicated to quantifying the economic value of bats. Here, we outline the types of information needed to better quantify the value of bats in agricultural ecosystems. Because of the complexity of the ecosystems involved, creative experimental design and innovative new methods will help advance our knowledge in this area. Experiments involving bats in agricultural systems may be needed sooner than later, before population declines associated with white-nose syndrome and wind turbines potentially render them impossible.

  12. Mechanisms of haplotype divergence at the RGA08 nucleotide-binding leucine-rich repeat gene locus in wild banana (Musa balbisiana).

    PubMed

    Baurens, Franc-Christophe; Bocs, Stéphanie; Rouard, Mathieu; Matsumoto, Takashi; Miller, Robert N G; Rodier-Goud, Marguerite; MBéguié-A-MBéguié, Didier; Yahiaoui, Nabila

    2010-07-16

    Comparative sequence analysis of complex loci such as resistance gene analog clusters allows estimating the degree of sequence conservation and mechanisms of divergence at the intraspecies level. In banana (Musa sp.), two diploid wild species Musa acuminata (A genome) and Musa balbisiana (B genome) contribute to the polyploid genome of many cultivars. The M. balbisiana species is associated with vigour and tolerance to pests and disease and little is known on the genome structure and haplotype diversity within this species. Here, we compare two genomic sequences of 253 and 223 kb corresponding to two haplotypes of the RGA08 resistance gene analog locus in M. balbisiana "Pisang Klutuk Wulung" (PKW). Sequence comparison revealed two regions of contrasting features. The first is a highly colinear gene-rich region where the two haplotypes diverge only by single nucleotide polymorphisms and two repetitive element insertions. The second corresponds to a large cluster of RGA08 genes, with 13 and 18 predicted RGA genes and pseudogenes spread over 131 and 152 kb respectively on each haplotype. The RGA08 cluster is enriched in repetitive element insertions, in duplicated non-coding intergenic sequences including low complexity regions and shows structural variations between haplotypes. Although some allelic relationships are retained, a large diversity of RGA08 genes occurs in this single M. balbisiana genotype, with several RGA08 paralogs specific to each haplotype. The RGA08 gene family has evolved by mechanisms of unequal recombination, intragenic sequence exchange and diversifying selection. An unequal recombination event taking place between duplicated non-coding intergenic sequences resulted in a different RGA08 gene content between haplotypes pointing out the role of such duplicated regions in the evolution of RGA clusters. Based on the synonymous substitution rate in coding sequences, we estimated a 1 million year divergence time for these M. balbisiana haplotypes. A large RGA08 gene cluster identified in wild banana corresponds to a highly variable genomic region between haplotypes surrounded by conserved flanking regions. High level of sequence identity (70 to 99%) of the genic and intergenic regions suggests a recent and rapid evolution of this cluster in M. balbisiana.

  13. A parallel calibration utility for WRF-Hydro on high performance computers

    NASA Astrophysics Data System (ADS)

    Wang, J.; Wang, C.; Kotamarthi, V. R.

    2017-12-01

    A successful modeling of complex hydrological processes comprises establishing an integrated hydrological model which simulates the hydrological processes in each water regime, calibrates and validates the model performance based on observation data, and estimates the uncertainties from different sources especially those associated with parameters. Such a model system requires large computing resources and often have to be run on High Performance Computers (HPC). The recently developed WRF-Hydro modeling system provides a significant advancement in the capability to simulate regional water cycles more completely. The WRF-Hydro model has a large range of parameters such as those in the input table files — GENPARM.TBL, SOILPARM.TBL and CHANPARM.TBL — and several distributed scaling factors such as OVROUGHRTFAC. These parameters affect the behavior and outputs of the model and thus may need to be calibrated against the observations in order to obtain a good modeling performance. Having a parameter calibration tool specifically for automate calibration and uncertainty estimates of WRF-Hydro model can provide significant convenience for the modeling community. In this study, we developed a customized tool using the parallel version of the model-independent parameter estimation and uncertainty analysis tool, PEST, to enabled it to run on HPC with PBS and SLURM workload manager and job scheduler. We also developed a series of PEST input file templates that are specifically for WRF-Hydro model calibration and uncertainty analysis. Here we will present a flood case study occurred in April 2013 over Midwest. The sensitivity and uncertainties are analyzed using the customized PEST tool we developed.

  14. How agro-ecological research helps to address food security issues under new IPM and pesticide reduction policies for global crop production systems.

    PubMed

    E Birch, A Nicholas; Begg, Graham S; Squire, Geoffrey R

    2011-06-01

    Drivers behind food security and crop protection issues are discussed in relation to food losses caused by pests. Pests globally consume food estimated to feed an additional one billion people. Key drivers include rapid human population increase, climate change, loss of beneficial on-farm biodiversity, reduction in per capita cropped land, water shortages, and EU pesticide withdrawals under policies relating to 91/414 EEC. IPM (Integrated Pest Management) will be compulsory for all EU agriculture by 2014 and is also being widely adopted globally. IPM offers a 'toolbox' of complementary crop- and region-specific crop protection solutions to address these rising pressures. IPM aims for more sustainable solutions by using complementary technologies. The applied research challenge now is to reduce selection pressure on single solution strategies, by creating additive/synergistic interactions between IPM components. IPM is compatible with organic, conventional, and GM cropping systems and is flexible, allowing regional fine-tuning. It reduces pests below economic thresholds utilizing key 'ecological services', particularly biocontrol. A recent global review demonstrates that IPM can reduce pesticide use and increase yields of most of the major crops studied. Landscape scale 'ecological engineering', together with genetic improvement of new crop varieties, will enhance the durability of pest-resistant cultivars (conventional and GM). IPM will also promote compatibility with semiochemicals, biopesticides, precision pest monitoring tools, and rapid diagnostics. These combined strategies are urgently needed and are best achieved via multi-disciplinary research, including complex spatio-temporal modelling at farm and landscape scales. Integrative and synergistic use of existing and new IPM technologies will help meet future food production needs more sustainably in developed and developing countries, in an era of reduced pesticide availability. Current IPM research gaps are identified and discussed.

  15. Identification and Analysis of Jasmonate Pathway Genes in Coffea canephora (Robusta Coffee) by In Silico Approach.

    PubMed

    Bharathi, Kosaraju; Sreenath, H L

    2017-07-01

    Coffea canephora is the commonly cultivated coffee species in the world along with Coffea arabica . Different pests and pathogens affect the production and quality of the coffee. Jasmonic acid (JA) is a plant hormone which plays an important role in plants growth, development, and defense mechanisms, particularly against insect pests. The key enzymes involved in the production of JA are lipoxygenase, allene oxide synthase, allene oxide cyclase, and 12-oxo-phytodienoic reductase. There is no report on the genes involved in JA pathway in coffee plants. We made an attempt to identify and analyze the genes coding for these enzymes in C. canephora . First, protein sequences of jasmonate pathway genes from model plant Arabidopsis thaliana were identified in the National Center for Biotechnology Information (NCBI) database. These protein sequences were used to search the web-based database Coffee Genome Hub to identify homologous protein sequences in C. canephora genome using Basic Local Alignment Search Tool (BLAST). Homologous protein sequences for key genes were identified in the C. canephora genome database. Protein sequences of the top matches were in turn used to search in NCBI database using BLAST tool to confirm the identity of the selected proteins and to identify closely related genes in species. The protein sequences from C. canephora database and the top matches in NCBI were aligned, and phylogenetic trees were constructed using MEGA6 software and identified the genetic distance of the respective genes. The study identified the four key genes of JA pathway in C. canephora , confirming the conserved nature of the pathway in coffee. The study expected to be useful to further explore the defense mechanisms of coffee plants. JA is a plant hormone that plays an important role in plant defense against insect pests. Genes coding for the 4 key enzymes involved in the production of JA viz., LOX, AOS, AOC, and OPR are identified in C. canephora (robusta coffee) by bioinformatic approaches confirming the conserved nature of the pathway in coffee. The findings are useful to understand the defense mechanisms of C. canephora and coffee breeding in the long run. JA is a plant hormone that plays an important role in plant defense against insect pests. Genes coding for the 4 key enzymes involved in the production of JA viz., LOX, AOS, AOC and OPR were identified and analyzed in C. canephora (robusta coffee) by in silico approach. The study has confirmed the conserved nature of JA pathway in coffee; the findings are useful to further explore the defense mechanisms of coffee plants. Abbreviations used: C. canephora : Coffea canephora ; C. arabica : Coffea arabica ; JA: Jasmonic acid; CGH: Coffee Genome Hub; NCBI: National Centre for Biotechnology Information; BLAST: Basic Local Alignment Search Tool; A. thaliana : Arabidopsis thaliana ; LOX: Lipoxygenase, AOS: Allene oxide synthase; AOC: Allene oxide cyclase; OPR: 12 oxo phytodienoic reductase.

  16. Climate change impact on the occurrence of selected pests in the regional scale in the Czech Republic

    NASA Astrophysics Data System (ADS)

    Kocmankova, E.; Trnka, M.; Zalud, Z.; Semeradova, D.; Dubrovsky, M.; Juroch, J.; Mozny, M.

    2009-04-01

    Climate conditions exert significant influence over the the population dynamic, life cycle duration, infestation pressure and the overall occurrence of majority of agricultural pests and diseases. Particularly in the case of those pest species whose development is directly linked with the climate conditions the shift of their climatic niche or their infestation capability is to be expected under the changing climate. Te presented study is focused on the most important potato pest i.e Colorado potato beetle (Leptinotarsa decemlineata, Say 1824) and most important pest of grain maize i.e. European corn borer (Ostrinia nubilalis, Hübner 1796). Simulations of potential distribution of pests in the Czech Republic in the conditions of climate change were made with the usage of dynamical model CLIMEX and by the interpolation of output EI from 43 locations there are climate conditions of almost whole area of the Czech Republic considered as favorable for pest' survival. The models validation was based on the comparison of the modeled potential pests' distribution with the field observations in the current climate conditions. Under the expected climate conditions the pests will most likely be able to complete their development earlier and in higher population densities. Both mechanisms might cause a subsequent increase of the severity of the pest infestation. In addition to this the higher temperature and its earlier coming in the beginning of the vegetative season may support the mobility and faster local spread of some species. The estimates of the future climate is based on the assumption of slow increase of green house gases emissions and low climate sensitivity to their rising concentration (LOW B1) as well as the "opposite" scenario assuming rapid growth of emissions and the high sensitivity of the climate system (HIGH A2). Three GCM models that were driven by these emission scenarios included HadCM3, NCAR-PCM and ECHAM4. For Colorado potato beetle the realization of HIGH A2 in combination with HadCM3 means almost the half of the arable land endangered by the occurrence of bivoltine population by 2025. The same model indicates for 2050 this area increasing by 72 %. According to ECHAM A2 2050 is the occurrence of partial third generation likely in the 45 % of arable land and completed third generation in the 0.2 % of arable land. The results show that climate will be a significant factor determining the development and survival of the European corn borer. According to the presented models estimations the area of the univoltine population establishment could be through the next 20 - 30 years significantly larger and till 2050 it could cover most of the agriculturally suitable land in the Czech Republic. The threat of the ECB bivoltine population expansion in the next decade is not immediate but is likely between 2025 - 2050 at least in the warmest areas in the Czech Republic. There is the apparent risk of the increasing damage caused by pests due to the shifts in the climate conditions. It should be stressed that the study is based on so called potential distribution which means the expected geographical distribution of the given species is based only on the climate conditions regardless of any other factors determining the species abundance or distribution. ACKNOWLEDGEMENTS: The study was supported by the project of Grant Agency of the Czech Republic (no. 521/08/1682), th 6th FP EU research projects CECILIA (no GOCE 037005) and the 6th FP EU project Adagio (Adaptation of Agriculture in European Regions at Environmental Risk under Climate Change) SSPE-CT-2006-044210.

  17. The food and environmental safety of Bt crops.

    PubMed

    Koch, Michael S; Ward, Jason M; Levine, Steven L; Baum, James A; Vicini, John L; Hammond, Bruce G

    2015-01-01

    Bacillus thuringiensis (Bt) microbial pesticides have a 50-year history of safety in agriculture. Cry proteins are among the active insecticidal ingredients in these pesticides, and genes coding for Cry proteins have been introduced into agricultural crops using modern biotechnology. The Cry gene sequences are often modified to enable effective expression in planta and several Cry proteins have been modified to increase biological activity against the target pest(s). Additionally, the domains of different but structurally conserved Cry proteins can be combined to produce chimeric proteins with enhanced insecticidal properties. Environmental studies are performed and include invertebrates, mammals, and avian species. Mammalian studies used to support the food and feed safety assessment are also used to support the wild mammal assessment. In addition to the NTO assessment, the environmental assessment includes a comparative assessment between the Bt crop and the appropriate conventional control that is genetically similar but lacks the introduced trait to address unintended effects. Specific phenotypic, agronomic, and ecological characteristics are measured in the Bt crop and the conventional control to evaluate whether the introduction of the insect resistance has resulted in any changes that might cause ecological harm in terms of altered weed characteristics, susceptibility to pests, or adverse environmental impact. Additionally, environmental interaction data are collected in field experiments for Bt crop to evaluate potential adverse effects. Further to the agronomic and phenotypic evaluation, potential movement of transgenes from a genetically modified crop plants into wild relatives is assessed for a new pest resistance gene in a new crop. This review summarizes the evidence for safety of crops containing Cry proteins for humans, livestock, and other non-target organisms.

  18. The food and environmental safety of Bt crops

    PubMed Central

    Koch, Michael S.; Ward, Jason M.; Levine, Steven L.; Baum, James A.; Vicini, John L.; Hammond, Bruce G.

    2015-01-01

    Bacillus thuringiensis (Bt) microbial pesticides have a 50-year history of safety in agriculture. Cry proteins are among the active insecticidal ingredients in these pesticides, and genes coding for Cry proteins have been introduced into agricultural crops using modern biotechnology. The Cry gene sequences are often modified to enable effective expression in planta and several Cry proteins have been modified to increase biological activity against the target pest(s). Additionally, the domains of different but structurally conserved Cry proteins can be combined to produce chimeric proteins with enhanced insecticidal properties. Environmental studies are performed and include invertebrates, mammals, and avian species. Mammalian studies used to support the food and feed safety assessment are also used to support the wild mammal assessment. In addition to the NTO assessment, the environmental assessment includes a comparative assessment between the Bt crop and the appropriate conventional control that is genetically similar but lacks the introduced trait to address unintended effects. Specific phenotypic, agronomic, and ecological characteristics are measured in the Bt crop and the conventional control to evaluate whether the introduction of the insect resistance has resulted in any changes that might cause ecological harm in terms of altered weed characteristics, susceptibility to pests, or adverse environmental impact. Additionally, environmental interaction data are collected in field experiments for Bt crop to evaluate potential adverse effects. Further to the agronomic and phenotypic evaluation, potential movement of transgenes from a genetically modified crop plants into wild relatives is assessed for a new pest resistance gene in a new crop. This review summarizes the evidence for safety of crops containing Cry proteins for humans, livestock, and other non-target organisms. PMID:25972882

  19. AvianBuffer: An interactive tool for characterising and managing wildlife fear responses.

    PubMed

    Guay, Patrick-Jean; van Dongen, Wouter F D; Robinson, Randall W; Blumstein, Daniel T; Weston, Michael A

    2016-11-01

    The characterisation and management of deleterious processes affecting wildlife are ideally based on sound scientific information. However, relevant information is often absent, or difficult to access or contextualise for specific management purposes. We describe 'AvianBuffer', an interactive online tool enabling the estimation of distances at which Australian birds respond fearfully to humans. Users can input species assemblages and determine a 'separation distance' above which the assemblage is predicted to not flee humans. They can also nominate the diversity they wish to minimise disturbance to, or a specific separation distance to obtain an estimate of the diversity that will remain undisturbed. The dataset is based upon flight-initiation distances (FIDs) from 251 Australian bird species (n = 9190 FIDs) and a range of human-associated stimuli. The tool will be of interest to a wide audience including conservation managers, pest managers, policy makers, land-use planners, education and public outreach officers, animal welfare proponents and wildlife ecologists. We discuss possible applications of the data, including the construction of buffers, development of codes of conduct, environmental impact assessments and public outreach. This tool will help balance the growing need for biodiversity conservation in areas where humans can experience nature. The online resource will be expanded in future iterations to include an international database of FIDs of both avian and non-avian species.

  20. Transport and stability analyses supporting disruption prediction in high beta KSTAR plasmas

    NASA Astrophysics Data System (ADS)

    Ahn, J.-H.; Sabbagh, S. A.; Park, Y. S.; Berkery, J. W.; Jiang, Y.; Riquezes, J.; Lee, H. H.; Terzolo, L.; Scott, S. D.; Wang, Z.; Glasser, A. H.

    2017-10-01

    KSTAR plasmas have reached high stability parameters in dedicated experiments, with normalized beta βN exceeding 4.3 at relatively low plasma internal inductance li (βN/li>6). Transport and stability analyses have begun on these plasmas to best understand a disruption-free path toward the design target of βN = 5 while aiming to maximize the non-inductive fraction of these plasmas. Initial analysis using the TRANSP code indicates that the non-inductive current fraction in these plasmas has exceeded 50 percent. The advent of KSTAR kinetic equilibrium reconstructions now allows more accurate computation of the MHD stability of these plasmas. Attention is placed on code validation of mode stability using the PEST-3 and resistive DCON codes. Initial evaluation of these analyses for disruption prediction is made using the disruption event characterization and forecasting (DECAF) code. The present global mode kinetic stability model in DECAF developed for low aspect ratio plasmas is evaluated to determine modifications required for successful disruption prediction of KSTAR plasmas. Work supported by U.S. DoE under contract DE-SC0016614.

  1. Detecting pyrethroid resistance in predatory mites inhabiting soil and litter: an in vitro test.

    PubMed

    El Adouzi, Marine; Bonato, Olivier; Roy, Lise

    2017-06-01

    While resistance against insecticides is widely known in pest arthropods, it remains poorly known in non-target arthropods of the same agrosystems. This may be of crucial importance in the context of organic pest management or integrated pest management. First, stopping of pesticide pressure during farm conversion may lead to important rearrangements of non-target communities due to fitness cost of resistance in populations of some species. Second, resistant biological agents may be useful to farms with low synthetic pesticide use. Communities of mesostigmatid mites, encompassing numerous predatory species, are supposed to be involved in important ecological processes in both crop soils and animal litter/manure. Here we provide a tarsal contact method for assessing resistance in different populations from various species of mesostigmatid mites. Analyses of data from repeated tests on three populations from different mesostigmatid families proved the method to be robust and able to generate consistent and reliable mortality percentages according to insecticide concentration. Our bioassay system allows for both one-shot estimate of pyrethroid sensitivity in mite populations and estimation of how it changes over time, making possible survival analyses and assessment of recovery from knockdown. The rating system retained makes it possible to score response to insecticides in a consistent and standard way in species from different mesostigmatid families. © 2016 Society of Chemical Industry. © 2016 Society of Chemical Industry.

  2. Oral toxicity of p-aminopropiophenone to brushtail possums (Trichosurus vulpecula), dama wallabies (Macropus eugenii), and mallards (Anas platyrhynchos).

    PubMed

    Fisher, P; O'Connor, C E; Morriss, G

    2008-07-01

    Development of p-aminopropiophenone (PAPP) as a toxicant for pest predator management in New Zealand and Australia prompted investigation of its toxicity to potential nontarget species. Acute oral toxicity of PAPP in brushtail possums (Trichosurus vulpecula), dama wallabies (Macropus eugenii), and Mallards (Anas platyrhynchos) was estimated in pen trials, carried out between February 2000 and September 2001. The susceptibility of possums (LD50>or=500 mg kg(-1)) and wallabies (LD50 89 mg kg(-1)) to PAPP was low in comparison to noncarnivorous placental mammal species, but ducks (LD50 38 mg kg(-1)) were more susceptible than other bird species. These results suggest that the nontarget hazard to possums and wallabies from PAPP bait applied for pest predator control would be low. However, future development of PAPP as a vertebrate pest control agent should include rigorous assessments of the hazard posed by bait formulations to bird species and provision for delivery techniques that could mitigate exposure of nontarget birds.

  3. On constraining pilot point calibration with regularization in PEST

    USGS Publications Warehouse

    Fienen, M.N.; Muffels, C.T.; Hunt, R.J.

    2009-01-01

    Ground water model calibration has made great advances in recent years with practical tools such as PEST being instrumental for making the latest techniques available to practitioners. As models and calibration tools get more sophisticated, however, the power of these tools can be misapplied, resulting in poor parameter estimates and/or nonoptimally calibrated models that do not suit their intended purpose. Here, we focus on an increasingly common technique for calibrating highly parameterized numerical models - pilot point parameterization with Tikhonov regularization. Pilot points are a popular method for spatially parameterizing complex hydrogeologic systems; however, additional flexibility offered by pilot points can become problematic if not constrained by Tikhonov regularization. The objective of this work is to explain and illustrate the specific roles played by control variables in the PEST software for Tikhonov regularization applied to pilot points. A recent study encountered difficulties implementing this approach, but through examination of that analysis, insight into underlying sources of potential misapplication can be gained and some guidelines for overcoming them developed. ?? 2009 National Ground Water Association.

  4. Mesoionic insecticides: a novel class of insecticides that modulate nicotinic acetylcholine receptors.

    PubMed

    Holyoke, Caleb W; Cordova, Daniel; Zhang, Wenming; Barry, James D; Leighty, Robert M; Dietrich, Robert F; Rauh, James J; Pahutski, Thomas F; Lahm, George P; Tong, My-Hanh Thi; Benner, Eric A; Andreassi, John L; Smith, Rejane M; Vincent, Daniel R; Christianson, Laurie A; Teixeira, Luis A; Singh, Vineet; Hughes, Kenneth A

    2017-04-01

    As the world population grows towards 9 billion by 2050, it is projected that food production will need to increase by 60%. A critical part of this growth includes the safe and effective use of insecticides to reduce the estimated 20-49% loss of global crop yields owing to pests. The development of new insecticides will help to sustain this protection and overcome insecticide resistance. A novel class of mesoionic compounds has been discovered, with exceptional insecticidal activity on a range of Hemiptera and Lepidoptera. These compounds bind to the orthosteric site of the nicotinic acetylcholine receptor and result in a highly potent inhibitory action at the receptor with minimal agonism. The synthesis, biological activity, optimization and mode of action will be discussed. Triflumezopyrim insect control will provide a powerful tool for control of hopper species in rice throughout Asia. Dicloromezotiaz can provide a useful control tool for lepidopteran pests, with an underexploited mode of action among these pests. © 2016 Society of Chemical Industry. © 2016 Society of Chemical Industry.

  5. Tamarisk control on public lands in the desert of southern California: two case studies

    USGS Publications Warehouse

    1994-01-01

    As a land manager, the Federal Government faces enormous challenges from exotic pest invasions and associated changes to the structure and stability of native ecosystems (Bureau of Land Management, 1988). On public lands administered by the Bureau of Land Management (BLM) alone, it is estimated that almost three million hectares are occupied by invasive exotic plant species (weeds). Assuming an annual rate of invasion of 14 percent, 930 hectares of BLM-administered land are infested everyday by weeds (Jerry Asher, personal communication). When one considers the fact that BLM administers only about one-third of the public land in the United States (The Keystone Center, 1991), the magnitude of the problem assumes staggering proportions. The scenario described in the quote above portrays only some of the problems associated with the spread of the exotic plant tamarisk, a species on the California Exotic Pest Plant Council’s list of exotic pest plants of greatest concern (California Exotic Pest Plant Council, 1993). In this paper we review the threats posed by tamarisk invasion and proliferation and examine the traits that make the plant such a successful competitor. In addition, we highlight two tamarisk control efforts conducted by the Bureau of Land Management in the southern California desert.

  6. Screening mitochondrial DNA sequence variation as an alternative method for tracking established and outbreak populations of Queensland fruit fly at the species southern range limit.

    PubMed

    Blacket, Mark J; Malipatil, Mali B; Semeraro, Linda; Gillespie, Peter S; Dominiak, Bernie C

    2017-04-01

    Understanding the relationship between incursions of insect pests and established populations is critical to implementing effective control. Studies of genetic variation can provide powerful tools to examine potential invasion pathways and longevity of individual pest outbreaks. The major fruit fly pest in eastern Australia, Queensland fruit fly Bactrocera tryoni (Froggatt), has been subject to significant long-term quarantine and population reduction control measures in the major horticulture production areas of southeastern Australia, at the species southern range limit. Previous studies have employed microsatellite markers to estimate gene flow between populations across this region. In this study, we used an independent genetic marker, mitochondrial DNA (mtDNA) sequences, to screen genetic variation in established and adjacent outbreak populations in southeastern Australia. During the study period, favorable environmental conditions resulted in multiple outbreaks, which appeared genetically distinctive and relatively geographically localized, implying minimal dispersal between simultaneous outbreaks. Populations in established regions were found to occur over much larger areas. Screening mtDNA (female) lineages proved to be an effective alternative genetic tool to assist in understanding fruit fly population dynamics and provide another possible molecular method that could now be employed for better understanding of the ecology and evolution of this and other pest species.

  7. Development of a peptide substrate for detection of Sunn pest damage in wheat flour.

    PubMed

    Hançerlioğulları, Begüm Zeynep; Köksel, Hamit; Dudak, Fahriye Ceyda

    2018-05-07

    Since the common protease substrates did not give satisfactory results for the determination of Sunn pest protease activity in damaged wheat, different peptide substrates derived from the repeat sequences of high molecular weight glutenin subunits were synthesized. Hydrolysis of peptides by pest protease was determined by HPLC. Among three peptides having the same consensus motifs, peptide1 (PGQGQQGYYPTSPQQ) showed the best catalytic efficiency. A novel assay was described for monitoring the enzymatic activity of protease extracted from damaged wheat flour. The selected peptide was labeled with a fluorophore (EDANS) and quencher (Dabcyl) to display fluorescence resonance energy transfer (FRET). The proteolytic activity was measured by the change in fluorescence intensity that occurred when the protease cleaved the peptide substrate. Furthermore, the developed assay was modified for rapid and easy detection of bug damage in flour. Flour samples were suspended in water and mixed with fluorescence peptide substrate. After centrifugation, the fluorescence intensities of the supernatants were determined which is proportional with the protease content of the flour. The total analysis time for the developed assay is estimated as 15 minutes. The developed assay permits a significant decrease in time and labor, offering sensitive detection of Sunn pest damage in wheat flour. This article is protected by copyright. All rights reserved.

  8. Large-scale deployment of seed treatments has driven rapid increase in use of neonicotinoid insecticides and preemptive pest management in US field crops.

    PubMed

    Douglas, Margaret R; Tooker, John F

    2015-04-21

    Neonicotinoids are the most widely used class of insecticides worldwide, but patterns of their use in the U.S. are poorly documented, constraining attempts to understand their role in pest management and potential nontarget effects. We synthesized publicly available data to estimate and interpret trends in neonicotinoid use since their introduction in 1994, with a special focus on seed treatments, a major use not captured by the national pesticide-use survey. Neonicotinoid use increased rapidly between 2003 and 2011, as seed-applied products were introduced in field crops, marking an unprecedented shift toward large-scale, preemptive insecticide use: 34-44% of soybeans and 79-100% of maize hectares were treated in 2011. This finding contradicts recent analyses, which concluded that insecticides are used today on fewer maize hectares than a decade or two ago. If current trends continue, neonicotinoid use will increase further through application to more hectares of soybean and other crop species and escalation of per-seed rates. Alternatively, our results, and other recent analyses, suggest that carefully targeted efforts could considerably reduce neonicotinoid use in field crops without yield declines or economic harm to farmers, reducing the potential for pest resistance, nontarget pest outbreaks, environmental contamination, and harm to wildlife, including pollinator species.

  9. Spatial distribution and sequential sampling plans for Tuta absoluta (Lepidoptera: Gelechiidae) in greenhouse tomato crops.

    PubMed

    Cocco, Arturo; Serra, Giuseppe; Lentini, Andrea; Deliperi, Salvatore; Delrio, Gavino

    2015-09-01

    The within- and between-plant distribution of the tomato leafminer, Tuta absoluta (Meyrick), was investigated in order to define action thresholds based on leaf infestation and to propose enumerative and binomial sequential sampling plans for pest management applications in protected crops. The pest spatial distribution was aggregated between plants, and median leaves were the most suitable sample to evaluate the pest density. Action thresholds of 36 and 48%, 43 and 56% and 60 and 73% infested leaves, corresponding to economic thresholds of 1 and 3% damaged fruits, were defined for tomato cultivars with big, medium and small fruits respectively. Green's method was a more suitable enumerative sampling plan as it required a lower sampling effort. Binomial sampling plans needed lower average sample sizes than enumerative plans to make a treatment decision, with probabilities of error of <0.10. The enumerative sampling plan required 87 or 343 leaves to estimate the population density in extensive or intensive ecological studies respectively. Binomial plans would be more practical and efficient for control purposes, needing average sample sizes of 17, 20 and 14 leaves to take a pest management decision in order to avoid fruit damage higher than 1% in cultivars with big, medium and small fruits respectively. © 2014 Society of Chemical Industry.

  10. Stylet Penetration Estimates for a Suite of Phytophagous Hemipteran Pests of Row Crops

    USDA-ARS?s Scientific Manuscript database

    Members of the Miridae (Lygus lineolaris Palisot de Beauvois and Pseudatomoscelis seriatus Reuter) and Pentatomidae (Acrosternum hilare Say, Euschistus servus (Say), E. tristigmus (Say), E. quadrator Rolston, Oebalus pugnax (Fabricius), Piezodorus guildinii (Westwood), and Thyanta custator accerra M...

  11. A weighted least squares estimation of the polynomial regression model on paddy production in the area of Kedah and Perlis

    NASA Astrophysics Data System (ADS)

    Musa, Rosliza; Ali, Zalila; Baharum, Adam; Nor, Norlida Mohd

    2017-08-01

    The linear regression model assumes that all random error components are identically and independently distributed with constant variance. Hence, each data point provides equally precise information about the deterministic part of the total variation. In other words, the standard deviations of the error terms are constant over all values of the predictor variables. When the assumption of constant variance is violated, the ordinary least squares estimator of regression coefficient lost its property of minimum variance in the class of linear and unbiased estimators. Weighted least squares estimation are often used to maximize the efficiency of parameter estimation. A procedure that treats all of the data equally would give less precisely measured points more influence than they should have and would give highly precise points too little influence. Optimizing the weighted fitting criterion to find the parameter estimates allows the weights to determine the contribution of each observation to the final parameter estimates. This study used polynomial model with weighted least squares estimation to investigate paddy production of different paddy lots based on paddy cultivation characteristics and environmental characteristics in the area of Kedah and Perlis. The results indicated that factors affecting paddy production are mixture fertilizer application cycle, average temperature, the squared effect of average rainfall, the squared effect of pest and disease, the interaction between acreage with amount of mixture fertilizer, the interaction between paddy variety and NPK fertilizer application cycle and the interaction between pest and disease and NPK fertilizer application cycle.

  12. Inverse problem to constrain the controlling parameters of large-scale heat transport processes: The Tiberias Basin example

    NASA Astrophysics Data System (ADS)

    Goretzki, Nora; Inbar, Nimrod; Siebert, Christian; Möller, Peter; Rosenthal, Eliyahu; Schneider, Michael; Magri, Fabien

    2015-04-01

    Salty and thermal springs exist along the lakeshore of the Sea of Galilee, which covers most of the Tiberias Basin (TB) in the northern Jordan- Dead Sea Transform, Israel/Jordan. As it is the only freshwater reservoir of the entire area, it is important to study the salinisation processes that pollute the lake. Simulations of thermohaline flow along a 35 km NW-SE profile show that meteoric and relic brines are flushed by the regional flow from the surrounding heights and thermally induced groundwater flow within the faults (Magri et al., 2015). Several model runs with trial and error were necessary to calibrate the hydraulic conductivity of both faults and major aquifers in order to fit temperature logs and spring salinity. It turned out that the hydraulic conductivity of the faults ranges between 30 and 140 m/yr whereas the hydraulic conductivity of the Upper Cenomanian aquifer is as high as 200 m/yr. However, large-scale transport processes are also dependent on other physical parameters such as thermal conductivity, porosity and fluid thermal expansion coefficient, which are hardly known. Here, inverse problems (IP) are solved along the NW-SE profile to better constrain the physical parameters (a) hydraulic conductivity, (b) thermal conductivity and (c) thermal expansion coefficient. The PEST code (Doherty, 2010) is applied via the graphical interface FePEST in FEFLOW (Diersch, 2014). The results show that both thermal and hydraulic conductivity are consistent with the values determined with the trial and error calibrations. Besides being an automatic approach that speeds up the calibration process, the IP allows to cover a wide range of parameter values, providing additional solutions not found with the trial and error method. Our study shows that geothermal systems like TB are more comprehensively understood when inverse models are applied to constrain coupled fluid flow processes over large spatial scales. References Diersch, H.-J.G., 2014. FEFLOW Finite Element Modeling of Flow, Mass and Heat Transport in Porous and Fractured Media. Springer- Verlag Berlin Heidelberg ,996p. Doherty J., 2010, PEST: Model-Independent Parameter Estimation. user manual 5th Edition. Watermark, Brisbane, Australia Magri, F., Inbar, N., Siebert C., Rosenthal, E., Guttman, J., Möller, P., 2015. Transient simulations of large-scale hydrogeological processes causing temperature and salinity anomalies in the Tiberias Basin. Journal of Hydrology, 520(0), 342-355.

  13. Forest pests and home values: The importance of accuracy in damage assessment and geocoding of properties

    Treesearch

    Klaus Moeltner; Christine E. Blinn; Thomas P. Holmes

    2017-01-01

    We examine the impact of measurement errors in geocoding of property locations and in the assessment of Mountain Pine Beetle-induced tree damage within the proximity of a given residence on estimated losses in home values. For our sample of homes in the wildland-urban interface of the Colorado front range and using a novel matching estimator with Bayesian regression...

  14. Value of neonicotinoid seed treatments to US soybean farmers.

    PubMed

    Hurley, Terrance; Mitchell, Paul

    2017-01-01

    The benefits of neonicotinoid seed treatment to soybean farmers have received increased scrutiny. Rather than use data from small-plot experiments, this research uses survey data from 500 US farmers to estimate the benefit of neonicotinoid seed treatments to them. As seed treatment users, farmers are familiar with their benefits in the field and have economic incentives to only use them if they provide value. Of the surveyed farmers, 51% used insecticide seed treatments, averaging 87% of their soybean area. Farmers indicated that human and environmental safety is an important consideration affecting their pest management decisions and reported aphids as the most managed and important soybean pest. Asking farmers who used seed treatments to state how much value they provided gives an estimate of $US 28.04 ha -1 treated in 2013, net of seed treatment costs. Farmer-reported average yields provided an estimated average yield gain of 128.0 kg ha -1 treated in 2013, or about $US 42.20 ha -1 treated, net of seed treatment costs. These estimates using different data and methods are consistent and suggest the value of insecticide seed treatments to the US soybean farmers who used them in 2013 was around $US 28-42 ha -1 treated, net of seed treatment costs. © 2016 Society of Chemical Industry. © 2016 Society of Chemical Industry.

  15. Comparing chemical and biological control strategies for twospotted spider mites (Acari: Tetranychidae) in commercial greenhouse production of bedding plants.

    PubMed

    Opit, George P; Perret, Jamis; Holt, Kiffnie; Nechols, James R; Margolies, David C; Williams, Kimberly A

    2009-02-01

    Efficacy, costs, and impact on crop salability of various biological and chemical control strategies for Tetranychus urticae Koch (Acari: Tetranychidae) were evaluated on mixed plantings of impatiens, Impatiens wallerana Hook.f (Ericales: Balsaminaceae), and ivy geranium, Pelargonium peltatum (1.) L'Hér. Ex Aiton (Geraniales: Geraniaceae), cultivars in commercial greenhouses. Chemical control consisting of the miticide bifenazate (Floramite) was compared with two biological control strategies using the predatory mite Phytoseiulus persimilis Athias-Henriot (Acari: Phytoseiidae). Treatments were 1) a single, early application of bifenazate; 2) a single, early release of predatory mites at a 1:4 predator:pest ratio based on leaf samples to estimate pest density; 3) a weekly release of predatory mites at numbers based on the area covered by the crop; and 4) an untreated control. T. urticae populations were monitored for 3 wk after the earliest treatment. When plants were ready for market, their salability was estimated. Bifenazate and density-based P. persimilis treatments effectively reduced T. urticae numbers starting 1 wk after plants had been treated, whereas the scheduled, area-based P. persimilis treatment had little or no effect. The percentage of flats that could be sold at the highest market wholesale price ranged from 15 to 33%, 44 to 86%, 84 to 95%, and 92 to 100%, in the control, weekly area-based P. persimilis, bifenazate, and single density-based P. persimilis treatments, respectively. We have shown that in commercial greenhouse production of herbaceous ornamental bedding plants, estimating pest density to determine the appropriate number of predators to release is as effective and offers nearly the same economic benefit as prophylactic use of pesticides.

  16. A model for long-distance dispersal of boll weevils (Coleoptera: Curculionidae)

    NASA Astrophysics Data System (ADS)

    Westbrook, John K.; Eyster, Ritchie S.; Allen, Charles T.

    2011-07-01

    The boll weevil, Anthonomus grandis (Boheman), has been a major insect pest of cotton production in the US, accounting for yield losses and control costs on the order of several billion US dollars since the introduction of the pest in 1892. Boll weevil eradication programs have eliminated reproducing populations in nearly 94%, and progressed toward eradication within the remaining 6%, of cotton production areas. However, the ability of weevils to disperse and reinfest eradicated zones threatens to undermine the previous investment toward eradication of this pest. In this study, the HYSPLIT atmospheric dispersion model was used to simulate daily wind-aided dispersal of weevils from the Lower Rio Grande Valley (LRGV) of southern Texas and northeastern Mexico. Simulated weevil dispersal was compared with weekly capture of weevils in pheromone traps along highway trap lines between the LRGV and the South Texas / Winter Garden zone of the Texas Boll Weevil Eradication Program. A logistic regression model was fit to the probability of capturing at least one weevil in individual pheromone traps relative to specific values of simulated weevil dispersal, which resulted in 60.4% concordance, 21.3% discordance, and 18.3% ties in estimating captures and non-captures. During the first full year of active eradication with widespread insecticide applications in 2006, the dispersal model accurately estimated 71.8%, erroneously estimated 12.5%, and tied 15.7% of capture and non-capture events. Model simulations provide a temporal risk assessment over large areas of weevil reinfestation resulting from dispersal by prevailing winds. Eradication program managers can use the model risk assessment information to effectively schedule and target enhanced trapping, crop scouting, and insecticide applications.

  17. A model for long-distance dispersal of boll weevils (Coleoptera: Curculionidae).

    PubMed

    Westbrook, John K; Eyster, Ritchie S; Allen, Charles T

    2011-07-01

    The boll weevil, Anthonomus grandis (Boheman), has been a major insect pest of cotton production in the US, accounting for yield losses and control costs on the order of several billion US dollars since the introduction of the pest in 1892. Boll weevil eradication programs have eliminated reproducing populations in nearly 94%, and progressed toward eradication within the remaining 6%, of cotton production areas. However, the ability of weevils to disperse and reinfest eradicated zones threatens to undermine the previous investment toward eradication of this pest. In this study, the HYSPLIT atmospheric dispersion model was used to simulate daily wind-aided dispersal of weevils from the Lower Rio Grande Valley (LRGV) of southern Texas and northeastern Mexico. Simulated weevil dispersal was compared with weekly capture of weevils in pheromone traps along highway trap lines between the LRGV and the South Texas/Winter Garden zone of the Texas Boll Weevil Eradication Program. A logistic regression model was fit to the probability of capturing at least one weevil in individual pheromone traps relative to specific values of simulated weevil dispersal, which resulted in 60.4% concordance, 21.3% discordance, and 18.3% ties in estimating captures and non-captures. During the first full year of active eradication with widespread insecticide applications in 2006, the dispersal model accurately estimated 71.8%, erroneously estimated 12.5%, and tied 15.7% of capture and non-capture events. Model simulations provide a temporal risk assessment over large areas of weevil reinfestation resulting from dispersal by prevailing winds. Eradication program managers can use the model risk assessment information to effectively schedule and target enhanced trapping, crop scouting, and insecticide applications.

  18. Genome Evolution in the Primary Endosymbiont of Whiteflies Sheds Light on Their Divergence

    PubMed Central

    Santos-Garcia, Diego; Vargas-Chavez, Carlos; Moya, Andrés; Latorre, Amparo; Silva, Francisco J.

    2015-01-01

    Whiteflies are important agricultural insect pests, whose evolutionary success is related to a long-term association with a bacterial endosymbiont, Candidatus Portiera aleyrodidarum. To completely characterize this endosymbiont clade, we sequenced the genomes of three new Portiera strains covering the two extant whitefly subfamilies. Using endosymbiont and mitochondrial sequences we estimated the divergence dates in the clade and used these values to understand the molecular evolution of the endosymbiont coding sequences. Portiera genomes were maintained almost completely stable in gene order and gene content during more than 125 Myr of evolution, except in the Bemisia tabaci lineage. The ancestor had already lost the genetic information transfer autonomy but was able to participate in the synthesis of all essential amino acids and carotenoids. The time of divergence of the B. tabaci complex was much more recent than previous estimations. The recent divergence of biotypes B (MEAM1 species) and Q (MED species) suggests that they still could be considered strains of the same species. We have estimated the rates of evolution of Portiera genes, synonymous and nonsynonymous, and have detected significant differences among-lineages, with most Portiera lineages evolving very slowly. Although the nonsynonymous rates were much smaller than the synonymous, the genomic dN/dS ratios were similar, discarding selection as the driver of among-lineage variation. We suggest variation in mutation rate and generation time as the responsible factors. In conclusion, the slow evolutionary rates of Portiera may have contributed to its long-term association with whiteflies, avoiding its replacement by a novel and more efficient endosymbiont. PMID:25716826

  19. Assessing the value and pest management window provided by neonicotinoid seed treatments for management of soybean aphid (Aphis glycines Matsumura) in the Upper Midwestern United States.

    PubMed

    Krupke, Christian H; Alford, Adam M; Cullen, Eileen M; Hodgson, Erin W; Knodel, Janet J; McCornack, Brian; Potter, Bruce D; Spigler, Madeline I; Tilmon, Kelley; Welch, Kelton

    2017-10-01

    A 2-year, multi-state study was conducted to assess the benefits of using soybean seed treated with the neonicotinoid thiamethoxam to manage soybean aphid in the upper Midwestern USA and compare this approach with an integrated pest management (IPM) approach that included monitoring soybean aphids and treating with foliar-applied insecticide only when the economic threshold was reached. Concentrations of thiamethoxam in soybean foliage were also quantified throughout the growing season to estimate the pest management window afforded by insecticidal seed treatments. Both the IPM treatment and thiamethoxam-treated seed resulted in significant reductions in cumulative aphid days when soybean aphid populations reached threshold levels. However, only the IPM treatment resulted in significant yield increases. Analysis of soybean foliage from thiamethoxam-treated seeds indicated that tissue concentrations of thiamethoxam were statistically similar to plants grown from untreated seeds beginning at the V2 growth stage, indicating that the period of pest suppression for soybean aphid is likely to be relatively short. These data demonstrate that an IPM approach, combining scouting and foliar-applied insecticide where necessary, remains the best option for treatment of soybean aphids, both in terms of protecting the yield potential of the crop and of break-even probability for producers. Furthermore, we found that thiamethoxam concentrations in foliage are unlikely to effectively manage soybean aphids for most of the pests' activity period across the region. © 2017 Society of Chemical Industry. © 2017 Society of Chemical Industry.

  20. Selection of Beauveria isolates pathogenic to adults of Nilaparvata lugens

    PubMed Central

    Li, Maoye; Li, Shiguang; Xu, Amei; Lin, Huafeng; Chen, Dexin; Wang, Hui

    2014-01-01

    Abstract The brown planthopper, Nilaparvata lugens Stål (Hemiptera: Delphacidae), is a destructive invasive pest and has become one of the most economically-important rice pests in China. Effective control measures are desperately needed. Entomopathogenic fungi, such as Beauveria bassiana (Balsamo-Crivelli) Vuillemin (Hypocreales: Clavicipitaceae) and B. brongniartii (Saccardo), have shown great potential for the management of some sucking pest species. In this study, to explore alternative strategies for sustainable control of the sucking pest population, nine isolates of Beauveria from different pests were bioassayed under the concentrated standard spray of 1000 conidia/mm 2 in laboratory. The cumulative mortalities of adults ranged from 17.2 to 79.1% 10 days after inoculation. The virulence among all tested isolates exhibited significant differences (at p = 0.05). The highest virulent isolate was Bb09, which killed 79.1% of the treated insects and had a median lethal time of 5.5 days. Its median lethal concentration values were estimated as 134 conidia/mm 2 on day 10. The chitinase activities of nine isolates were also assayed. The results showed that the chitinase activity (18.7 U/mg) of isolate Bbr09 was the highest among all tested isolates. The biological characteristics of these strains, including growth rate, sporulation, and germination rate, were further investigated. The results showed that strain Bbr09 exhibited the best biological characteristics with relatively higher hyphal growth rate, the highest spore production, and the fastest spore germination. The isolate of Bbr09 had strong pathogenicity and exhibited great potential for sustainable control of N . lugens . PMID:25373179

  1. Making Homes Healthy: International Code Council Processes and Patterns.

    PubMed

    Coyle, Edward C; Isett, Kimberley R; Rondone, Joseph; Harris, Rebecca; Howell, M Claire Batten; Brandus, Katherine; Hughes, Gwendolyn; Kerfoot, Richard; Hicks, Diana

    2016-01-01

    Americans spend more than 90% of their time indoors, so it is important that homes are healthy environments. Yet many homes contribute to preventable illnesses via poor air quality, pests, safety hazards, and others. Efforts have been made to promote healthy housing through code changes, but results have been mixed. In support of such efforts, we analyzed International Code Council's (ICC) building code change process to uncover patterns of content and context that may contribute to successful adoptions of model codes. Discover patterns of facilitators and barriers to code amendments proposals. Mixed methods study of ICC records of past code change proposals. N = 2660. N/A. N/A. There were 4 possible outcomes for each code proposal studied: accepted as submitted, accepted as modified, accepted as modified by public comment, and denied. We found numerous correlates for final adoption of model codes proposed to the ICC. The number of proponents listed on a proposal was inversely correlated with success. Organizations that submitted more than 15 proposals had a higher chance of success than those that submitted fewer than 15. Proposals submitted by federal agencies correlated with a higher chance of success. Public comments in favor of a proposal correlated with an increased chance of success, while negative public comment had an even stronger negative correlation. To increase the chance of success, public health officials should submit their code changes through internal ICC committees or a federal agency, limit the number of cosponsors of the proposal, work with (or become) an active proposal submitter, and encourage public comment in favor of passage through their broader coalition.

  2. Comparative analysis of genetic diversity among Indian populations of Scirpophaga incertulas by ISSR-PCR and RAPD-PCR.

    PubMed

    Kumar, L S; Sawant, A S; Gupta, V S; Ranjekar, P K

    2001-10-01

    Genetic variation between 28 Indian populations of the rice pest, Scirpophaga incertulas was evaluated using inter-simple sequence repeats (ISSR)-PCR assay. Nine SSR primers gave rise to 79 amplification products of which 67 were polymorphic. A dendrogram constructed from this data indicates that there is no geographical bias to the clustering and that gene flow between populations appears to be relatively unrestricted, substantiating our earlier conclusion based on the RAPD (random amplified polymorphic DNA) data. The dendrograms obtained using each of these marker systems were poorly correlated with each other as determined by Mantel's test for matrix correlation. Estimates of expected heterozygosity and marker index for each of these marker systems suggests that both these marker systems are equally efficient in determining polymorphisms. Matrix correlation analyses suggest that reliable estimates of genetic variation among the S. incertulas pest populations can be obtained by using RAPDs alone or in combination with ISSRs, but ISSRs alone cannot be used for this purpose.

  3. How to Identify Your Pest

    Science.gov Websites

    Pest Pest-specific Information (by name) Pest Control Tips Integrated Pest Management (IPM) Fact Sheets National Pesticide Information Center 1.800.858.7378 npic@ace.orst.edu We're open from 8:00AM to 12 Plants Pest Control Identify Your Pest Learn About Your Pest Control Your Pest Integrated Pest Management

  4. Transcriptome Analysis and Screening for Potential Target Genes for RNAi-Mediated Pest Control of the Beet Armyworm, Spodoptera exigua.

    PubMed

    Li, Hang; Jiang, Weihua; Zhang, Zan; Xing, Yanru; Li, Fei

    2013-01-01

    The beet armyworm, Spodoptera exigua (Hübner), is a serious pest worldwide that causes significant losses in crops. Unfortunately, genetic resources for the beet armyworm is extremely scarce. To improve these resources we sequenced the transcriptome of S. exigua representing all stages including eggs, 1(st) to 5(th) instar larvae, pupae, male and female adults using the Illumina Solexa platform. We assembled the transcriptome with Trinity that yielded 31,414 contigs. Of these contigs, 18,592 were annotated as protein coding genes by Blast searches against the NCBI nr database. It has been shown that knockdown of important insect genes by dsRNAs or siRNAs is a feasible mechanism to control insect pests. The first key step towards developing an efficient RNAi-mediated pest control technique is to find suitable target genes. To screen for effective target genes in the beet armyworm, we selected nine candidate genes. The sequences of these genes were amplified using the RACE strategy. Then, siRNAs were designed and chemically synthesized. We injected 2 µl siRNA (2 µg/µl) into the 4(th) instar larvae to knock down the respective target genes. The mRNA abundance of target genes decreased to different levels (∼20-94.3%) after injection of siRNAs. Knockdown of eight genes including chitinase7, PGCP, chitinase1, ATPase, tubulin1, arf2, tubulin2 and arf1 caused a significantly high level of mortality compared to the negative control (P<0.05). About 80% of the surviving insects in the siRNA-treated group of five genes (PGCP, chitinase1, tubulin1, tubulin2 and helicase) showed retarded development. In chitinase1-siRNA and chitinase7-siRNA administered groups, 12.5% survivors exhibited "half-ecdysis". In arf1-siRNA and arf2-siRNA groups, the body color of 15% became black 48 h after injections. In summary, the transcriptome could be a valuable genetic resource for identification of genes in S. exigua and this study provided putative targets for RNAi pest control.

  5. Transcriptome Analysis and Screening for Potential Target Genes for RNAi-Mediated Pest Control of the Beet Armyworm, Spodoptera exigua

    PubMed Central

    Zhang, Zan; Xing, Yanru; Li, Fei

    2013-01-01

    The beet armyworm, Spodoptera exigua (Hübner), is a serious pest worldwide that causes significant losses in crops. Unfortunately, genetic resources for the beet armyworm is extremely scarce. To improve these resources we sequenced the transcriptome of S. exigua representing all stages including eggs, 1st to 5th instar larvae, pupae, male and female adults using the Illumina Solexa platform. We assembled the transcriptome with Trinity that yielded 31,414 contigs. Of these contigs, 18,592 were annotated as protein coding genes by Blast searches against the NCBI nr database. It has been shown that knockdown of important insect genes by dsRNAs or siRNAs is a feasible mechanism to control insect pests. The first key step towards developing an efficient RNAi-mediated pest control technique is to find suitable target genes. To screen for effective target genes in the beet armyworm, we selected nine candidate genes. The sequences of these genes were amplified using the RACE strategy. Then, siRNAs were designed and chemically synthesized. We injected 2 µl siRNA (2 µg/µl) into the 4th instar larvae to knock down the respective target genes. The mRNA abundance of target genes decreased to different levels (∼20–94.3%) after injection of siRNAs. Knockdown of eight genes including chitinase7, PGCP, chitinase1, ATPase, tubulin1, arf2, tubulin2 and arf1 caused a significantly high level of mortality compared to the negative control (P<0.05). About 80% of the surviving insects in the siRNA-treated group of five genes (PGCP, chitinase1, tubulin1, tubulin2 and helicase) showed retarded development. In chitinase1-siRNA and chitinase7-siRNA administered groups, 12.5% survivors exhibited “half-ecdysis”. In arf1-siRNA and arf2-siRNA groups, the body color of 15% became black 48 h after injections. In summary, the transcriptome could be a valuable genetic resource for identification of genes in S. exigua and this study provided putative targets for RNAi pest control. PMID:23823756

  6. Minnesota's forest resources in 2004

    Treesearch

    Patrick D. Miles; Gary J. Brand; Manfred E. Mielke

    2006-01-01

    This report presents forest statistics based on the five annual inventory panels measured from 2000 through 2004. Forest area is estimated at 16.2 million acres or 32 percent of the total land area in the State. Important pests in Minnesota forests include the forest tent caterpillar and spruce budworm.

  7. Methoprene and control of stored-product insects

    USDA-ARS?s Scientific Manuscript database

    Estimated direct and indirect losses of grains and grain-based products caused by stored-product insects range from about 10% in temperate regions to almost 50% in humid tropical areas. Pest management strategies in bulk grains include the use of fumigants such as phosphine and sulfuryl fluoride, an...

  8. Assessment of methods for methyl iodide emission reduction and pest control using a simulation model

    NASA Astrophysics Data System (ADS)

    Luo, Lifang; Ashworth, Daniel J.; Šimunek, Jirka; Xuan, Richeng; Yates, Scott R.

    2013-02-01

    The increasing registration of the fumigant methyl iodide within the USA has led to more concerns about its toxicity to workers and bystanders. Emission mitigation strategies are needed to protect the public and environmental health while providing effective pest control. The effectiveness of various methods on emissions reduction and pest control was assessed using a process-based mathematical model in this study. Firstly, comparisons between the simulated and laboratory measured emission fluxes and cumulative emissions were made for methyl iodide (MeI) under four emission reduction treatments: 1) control, 2) using soil with high organic matter content (HOM), 3) being covered by virtually impermeable film (VIF), and 4) irrigating soil surface following fumigation (Irrigation). Then the model was extended to simulate a broader range of emission reduction strategies for MeI, including 5) being covered by high density polyethylene (HDPE), 6) increasing injection depth from 30 cm to 46 cm (Deep), 7) HDPE + Deep, 8) adding a reagent at soil surface (Reagent), 9) Reagent + Irrigation, and 10) Reagent + HDPE. Furthermore, the survivability of three types of soil-borne pests (citrus nematodes [Tylenchulus semipenetrans], barnyard seeds [Echinochloa crus-galli], fungi [Fusarium oxysporum]) was also estimated for each scenario. Overall, the trend of the measured emission fluxes as well as total emission were reasonably reproduced by the model for treatments 1 through 4. Based on the numerical simulation, the ranking of effectiveness in total emission reduction was VIF (82.4%) > Reagent + HDPE (73.2%) > Reagent + Irrigation (43.0%) > Reagent (23.5%) > Deep + HDPE (19.3%) > HOM (17.6%) > Deep (13.0%) > Irrigation (11.9%) > HDPE (5.8%). The order for pest control efficacy suggests, VIF had the highest pest control efficacy, followed by Deep + HDPE, Irrigation, Reagent + Irrigation, HDPE, Deep, Reagent + HDPE, Reagent, and HOM. Therefore, VIF is the optimal method disregarding the cost of the film since it maximizes efficacy while minimizing volatility losses. Otherwise, the integrated methods such as Deep + HDPE and Reagent + Irrigation, are recommended.

  9. Is the Combination of Insecticide and Mating Disruption Synergistic or Additive in Lightbrown Apple Moth, Epiphyas postvittana?

    PubMed Central

    Baker, Greg; Salehi, Latif; Woods, Bill

    2016-01-01

    Pest suppression from combinations of tactics is fundamental to pest management and eradication. Interactions may occur among tactical combinations and affect suppression. The best case is synergistic, where suppression from a combination is greater than the sum of effects from single tactics (AB >> A+B). We explored how mating disruption and insecticide interacted at field scale, additively or synergistically. Use of a pheromone delivery formulation (SPLAT™) as either a mating disruption treatment (i.e. a two-component pheromone alone) or as a lure and kill treatment (i.e. the two-component pheromone plus a permethrin insecticide) was compared for efficacy against the lightbrown apple moth Epiphyas postvittana. Next, four point-source densities of the SPLAT™ formulations were compared for communication disruption. Finally, the mating disruption and lure and kill treatments were applied with a broadcast insecticide. Population assessment used virgin female traps and synthetic pheromone in replicated 9-ha vineyard plots compared with untreated controls and insecticide-treated plots, to investigate interactions. Lure and kill and mating disruption provided equivalent suppression; no additional benefit accrued from including permethrin with the pheromone suggesting lack of contact. The highest point-source density tested (625/ha) was most effective. The insect growth regulator methoxyfenoxide applied by broadcast application lowered pest prevalence by 70% for the first ten weeks compared to pre-trial. Pheromone addition suppressed the pest further by an estimated 92.5%, for overall suppression of 97.7% from the treatment combination of insecticide plus mating disruption. This was close to that expected for an additive model of interactivity between insecticide and mating disruption (AB = A+B) estimated from plots with single tactics as 98% suppression in a combination. The results indicate the need to examine other tactical combinations to achieve the potential cost-efficiencies of synergistic interactions. PMID:27500834

  10. Is the Combination of Insecticide and Mating Disruption Synergistic or Additive in Lightbrown Apple Moth, Epiphyas postvittana?

    PubMed

    Suckling, David M; Baker, Greg; Salehi, Latif; Woods, Bill

    2016-01-01

    Pest suppression from combinations of tactics is fundamental to pest management and eradication. Interactions may occur among tactical combinations and affect suppression. The best case is synergistic, where suppression from a combination is greater than the sum of effects from single tactics (AB > A+B). We explored how mating disruption and insecticide interacted at field scale, additively or synergistically. Use of a pheromone delivery formulation (SPLAT™) as either a mating disruption treatment (i.e. a two-component pheromone alone) or as a lure and kill treatment (i.e. the two-component pheromone plus a permethrin insecticide) was compared for efficacy against the lightbrown apple moth Epiphyas postvittana. Next, four point-source densities of the SPLAT™ formulations were compared for communication disruption. Finally, the mating disruption and lure and kill treatments were applied with a broadcast insecticide. Population assessment used virgin female traps and synthetic pheromone in replicated 9-ha vineyard plots compared with untreated controls and insecticide-treated plots, to investigate interactions. Lure and kill and mating disruption provided equivalent suppression; no additional benefit accrued from including permethrin with the pheromone suggesting lack of contact. The highest point-source density tested (625/ha) was most effective. The insect growth regulator methoxyfenoxide applied by broadcast application lowered pest prevalence by 70% for the first ten weeks compared to pre-trial. Pheromone addition suppressed the pest further by an estimated 92.5%, for overall suppression of 97.7% from the treatment combination of insecticide plus mating disruption. This was close to that expected for an additive model of interactivity between insecticide and mating disruption (AB = A+B) estimated from plots with single tactics as 98% suppression in a combination. The results indicate the need to examine other tactical combinations to achieve the potential cost-efficiencies of synergistic interactions.

  11. Potential of pest regulation by insectivorous birds in Mediterranean woody crops.

    PubMed

    Rey Benayas, José M; Meltzer, Jorge; de Las Heras-Bravo, Daniel; Cayuela, Luis

    2017-01-01

    Regulation of agricultural pests managing their natural enemies represents an alternative to chemical pesticides. We assessed the potential of insectivorous birds as pest regulators in woody crops located in central Spain. A total of 417 nest boxes installed in five field study sites (one vineyard, two fruit orchards, and two olive groves) were monitored for use and breeding of insectivorous birds and other species for four consecutive years (2013-2016). At all field sites except the two olive groves, where birds never occupied the nest boxes, predation experiments were conducted with Greater wax moth (Galleria mellonella) sentinel caterpillars, and food consumption by birds was estimated. Nesting of insectivorous birds, chiefly Great tit (Parus major), and sparrows (Passer domesticus and P. montanus) increased over time, averaging 60% per field site in the vineyard and fruit orchards by the fourth year. Use of nest boxes by sparrows and by Garden dormouse (Eliomys quercinus) was high at the fruit orchards (70%) and the vineyard (30%), respectively. Micro-habitat characteristics (nest box level) and meso-habitat characteristics (patch level) strongly affected use of nest boxes and bird breeding (i.e. number of laid eggs and produced chicks) in different years. Distance to natural or semi-natural vegetation did not consistently affect bird breeding, nor did we see consistent evidence of competition between adjacent breeding birds. Predation rates of sentinel caterpillars were approximately one-third higher near boxes with nesting birds (31.51 ± 43.13%) than at paired distant areas without nest boxes (22.45% ± 38.58%). Food consumption by insectivorous birds per ha and breeding season were conservatively estimated to range from 0.02 kg in one fruit orchard to 0.15 kg in the vineyard. We conclude that installation of nest boxes in Mediterranean woody crops enhances populations of insectivorous birds that regulate pests, but that the effects are moderate and highly context-dependent.

  12. Potential of pest regulation by insectivorous birds in Mediterranean woody crops

    PubMed Central

    Meltzer, Jorge; de las Heras-Bravo, Daniel; Cayuela, Luis

    2017-01-01

    Regulation of agricultural pests managing their natural enemies represents an alternative to chemical pesticides. We assessed the potential of insectivorous birds as pest regulators in woody crops located in central Spain. A total of 417 nest boxes installed in five field study sites (one vineyard, two fruit orchards, and two olive groves) were monitored for use and breeding of insectivorous birds and other species for four consecutive years (2013–2016). At all field sites except the two olive groves, where birds never occupied the nest boxes, predation experiments were conducted with Greater wax moth (Galleria mellonella) sentinel caterpillars, and food consumption by birds was estimated. Nesting of insectivorous birds, chiefly Great tit (Parus major), and sparrows (Passer domesticus and P. montanus) increased over time, averaging 60% per field site in the vineyard and fruit orchards by the fourth year. Use of nest boxes by sparrows and by Garden dormouse (Eliomys quercinus) was high at the fruit orchards (70%) and the vineyard (30%), respectively. Micro-habitat characteristics (nest box level) and meso-habitat characteristics (patch level) strongly affected use of nest boxes and bird breeding (i.e. number of laid eggs and produced chicks) in different years. Distance to natural or semi-natural vegetation did not consistently affect bird breeding, nor did we see consistent evidence of competition between adjacent breeding birds. Predation rates of sentinel caterpillars were approximately one-third higher near boxes with nesting birds (31.51 ± 43.13%) than at paired distant areas without nest boxes (22.45% ± 38.58%). Food consumption by insectivorous birds per ha and breeding season were conservatively estimated to range from 0.02 kg in one fruit orchard to 0.15 kg in the vineyard. We conclude that installation of nest boxes in Mediterranean woody crops enhances populations of insectivorous birds that regulate pests, but that the effects are moderate and highly context-dependent. PMID:28877166

  13. Estimated crop loss due to coconut mite and financial analysis of controlling the pest using the acaricide abamectin.

    PubMed

    Rezende, Daniela; Melo, José W S; Oliveira, José E M; Gondim, Manoel G C

    2016-07-01

    Reducing the losses caused by Aceria guerreronis Keifer has been an arduous task for farmers. However, there are no detailed studies on losses that simultaneously analyse correlated parameters, and very few studies that address the economic viability of chemical control, the main strategy for managing this pest. In this study the objectives were (1) to estimate the crop loss due to coconut mite and (2) to perform a financial analysis of acaricide application to control the pest. For this, the following parameters were evaluated: number and weight of fruits, liquid albumen volume, and market destination of plants with and without monthly abamectin spraying (three harvests). The costs involved in the chemical control of A. guerreronis were also quantified. Higher A. guerreronis incidence on plants resulted in a 60 % decrease in the mean number of fruits harvested per bunch and a 28 % decrease in liquid albumen volume. Mean fruit weight remained unaffected. The market destination of the harvested fruit was also affected by higher A. guerreronis incidence. Untreated plants, with higher A. guerreronis infestation intensity, produced a lower proportion of fruit intended for fresh market and higher proportions of non-marketable fruit and fruit intended for industrial processing. Despite the costs involved in controlling A. guerreronis, the difference between the profit from the treated site and the untreated site was 18,123.50 Brazilian Real; this value represents 69.1 % higher profit at the treated site.

  14. Validation of Storm Water Management Model Storm Control Measures Modules

    NASA Astrophysics Data System (ADS)

    Simon, M. A.; Platz, M. C.

    2017-12-01

    EPA's Storm Water Management Model (SWMM) is a computational code heavily relied upon by industry for the simulation of wastewater and stormwater infrastructure performance. Many municipalities are relying on SWMM results to design multi-billion-dollar, multi-decade infrastructure upgrades. Since the 1970's, EPA and others have developed five major releases, the most recent ones containing storm control measures modules for green infrastructure. The main objective of this study was to quantify the accuracy with which SWMM v5.1.10 simulates the hydrologic activity of previously monitored low impact developments. Model performance was evaluated with a mathematical comparison of outflow hydrographs and total outflow volumes, using empirical data and a multi-event, multi-objective calibration method. The calibration methodology utilized PEST++ Version 3, a parameter estimation tool, which aided in the selection of unmeasured hydrologic parameters. From the validation study and sensitivity analysis, several model improvements were identified to advance SWMM LID Module performance for permeable pavements, infiltration units and green roofs, and these were performed and reported herein. Overall, it was determined that SWMM can successfully simulate low impact development controls given accurate model confirmation, parameter measurement, and model calibration.

  15. Managing outbreaks of invasive species--a new method to prioritize preemptive quarantine efforts across large geographic regions.

    PubMed

    Withrow, J R; Smith, E L; Koch, F H; Yemshanov, D

    2015-03-01

    In pest risk assessment it is frequently necessary to make time-critical decisions regarding management of expanding pest populations. When an invasive pest outbreak is expanding rapidly, preemptive quarantine of areas that are under imminent threat of infestation is one of only a few available management tools that can be implemented quickly to help control the expansion. The preemptive quarantine of locations that surround an infested area also acts as a safeguard to counteract the risk of failed detections of the pest in field surveys. In this paper, we present a method that assesses the suitability of preemptive quarantine measures at the level of small geographical subdivisions (U.S. counties). The cost of a preemptive quarantine in a given county is weighed against the protective benefit of delaying the spread of an outbreak to other neighboring counties. We demonstrate the approach with a decision support model that estimates the suitability of preemptive quarantine across multiple counties that surround areas infested with the emerald ash borer (Agrilus planipennis Fairmaire (EAB), Coleoptera: Buprestidae), an emerging major threat to ash tree species (Fraxinus spp.) in North America. The model identifies the U.S. counties where the installation of preemptive quarantine would most effectively slow the spread of EAB populations and reduce risk to high-value areas. Copyright © 2014 Elsevier Ltd. All rights reserved.

  16. Genetic diversity of papaya ring spot virus in Puerto Rico

    USDA-ARS?s Scientific Manuscript database

    The Food and Agriculture Organization estimates that 20-40% of crop yield is lost due to pests and diseases. Viruses are agents that cause diseases which contribute greatly to the global yield loss. Because of this, food production is negatively affected, especially in the tropics. Carica papaya, co...

  17. Development of transgenic strains for the biological control of the Mexican fruit fly, Anastrepha ludens

    USDA-ARS?s Scientific Manuscript database

    The Mexican fruit fly, Anastrepha ludens, is a highly significant agricultural pest species that has been genetically transformed with a piggyBac¬-based transposon vector system using independent vector and transposase helper plasmids. Estimated germ-line transformation frequencies were approximate...

  18. Dispersion of marked Euwallacea nr. fornicatus in Florida avocado groves, and estimation of lure sampling range

    USDA-ARS?s Scientific Manuscript database

    The shot hole borer, Euwallacea nr. fornicatus Eichhoff (Coleoptera: Curculionidae: Scolytinae), is a significant invasive pest of avocado. Females introduce pathogenic Fusarium fungus into galleries, resulting in a disease called Fusarium die-back. Lures containing either quercivorol or a-copaene a...

  19. Comparative efficacy of selected insecticide alternatives for boll weevil (Coleoptera: Curculionidae) control using laboratory bioassays

    USDA-ARS?s Scientific Manuscript database

    The boll weevil, Anthonomus grandis grandis (Boheman), is a major cotton pest responsible for an estimated $300 million in annual crop losses. Boll weevil eradication programs depend on malathion ULV to achieve and maintain eradication status. Should this effective and economical insecticide become ...

  20. Statistical considerations in the analysis of data from replicated bioassays

    USDA-ARS?s Scientific Manuscript database

    Multiple-dose bioassay is generally the preferred method for characterizing virulence of insect pathogens. Linear regression of probit mortality on log dose enables estimation of LD50/LC50 and slope, the latter having substantial effect on LD90/95s (doses of considerable interest in pest management)...

  1. Flight capacity of Sitophilus zeamais Motschulsky in relation to gender and temperature

    USDA-ARS?s Scientific Manuscript database

    The maize weevil, Sitophilus zeamais, is a major pest of stored products worldwide. In this research, we evaluated the flight performance of S. zeamais under various temperatures using a 26-channel computer-monitored flight-mill system to estimate total flight distance (TFD), total flight duration (...

  2. Integrated Pest Management (IPM)

    Science.gov Websites

    National Pesticide Information Center 1.800.858.7378 npic@ace.orst.edu We're open from 8:00AM to 12 Plants Pest Control Identify Your Pest Learn About Your Pest Control Your Pest Integrated Pest Management Home Page Pest Control Integrated Pest Management (IPM) Related Topics: Using Pesticides Around Pets

  3. Incorporating variability in point estimates in risk assessment: Bridging the gap between LC50 and population endpoints.

    PubMed

    Stark, John D; Vargas, Roger I; Banks, John E

    2015-07-01

    Historically, point estimates such as the median lethal concentration (LC50) have been instrumental in assessing risks associated with toxicants to rare or economically important species. In recent years, growing awareness of the shortcomings of this approach has led to an increased focus on analyses using population endpoints. However, risk assessment of pesticides still relies heavily on large amounts of LC50 data amassed over decades in the laboratory. Despite the fact that these data are generally well replicated, little or no attention has been given to the sometime high levels of variability associated with the generation of point estimates. This is especially important in agroecosystems where arthropod predator-prey interactions are often disrupted by the use of pesticides. Using laboratory derived data of 4 economically important species (2 fruit fly pest species and 2 braconid parasitoid species) and matrix based population models, the authors demonstrate in the present study a method for bridging traditional point estimate risk assessments with population outcomes. The results illustrate that even closely related species can show strikingly divergent responses to the same exposures to pesticides. Furthermore, the authors show that using different values within the 95% confidence intervals of LC50 values can result in very different population outcomes, ranging from quick recovery to extinction for both pest and parasitoid species. The authors discuss the implications of these results and emphasize the need to incorporate variability and uncertainty in point estimates for use in risk assessment. © 2015 SETAC.

  4. Maximizing Information Yield From Pheromone-Baited Monitoring Traps: Estimating Plume Reach, Trapping Radius, and Absolute Density of Cydia pomonella (Lepidoptera: Tortricidae) in Michigan Apple

    PubMed Central

    Adams, C. G.; Schenker, J. H.; McGhee, P. S.; Gut, L. J.; Brunner, J. F.

    2017-01-01

    Abstract Novel methods of data analysis were used to interpret codling moth (Cydia pomonella) catch data from central-trap, multiple-release experiments using a standard codlemone-baited monitoring trap in commercial apple orchards not under mating disruption. The main objectives were to determine consistency and reliability for measures of: 1) the trapping radius, composed of the trap’s behaviorally effective plume reach and the maximum dispersive distance of a responder population; and 2) the proportion of the population present in the trapping area that is caught. Two moth release designs were used: 1) moth releases at regular intervals in the four cardinal directions, and 2) evenly distributed moth releases across entire approximately 18-ha orchard blocks using both high and low codling moth populations. For both release designs, at high populations, the mean proportion catch was 0.01, and for the even release of low populations, that value was approximately 0.02. Mean maximum dispersive distance for released codling moth males was approximately 260 m. Behaviorally effective plume reach for the standard codling moth trap was < 5 m, and total trapping area for a single trap was approximately 21 ha. These estimates were consistent across three growing seasons and are supported by extraordinarily high replication for this type of field experiment. Knowing the trapping area and mean proportion caught, catch number per single monitoring trap can be translated into absolute pest density using the equation: males per trapping area = catch per trapping area/proportion caught. Thus, catches of 1, 3, 10, and 30 codling moth males per trap translate to approximately 5, 14, 48, and 143 males/ha, respectively, and reflect equal densities of females, because the codling moth sex ratio is 1:1. Combined with life-table data on codling moth fecundity and mortality, along with data on crop yield per trapping area, this fundamental knowledge of how to interpret catch numbers will enable pest managers to make considerably more precise projections of damage and therefore more precise and reliable decisions on whether insecticide applications are justified. The principles and methods established here for estimating absolute codling moth density may be broadly applicable to pests generally and thereby could set a new standard for integrated pest management decisions based on trapping. PMID:28131989

  5. Shot noise perturbations and mean first passage times between stable states.

    PubMed

    Drury, Kevin L S

    2007-08-01

    Predicting crossings between stable states is a central issue in population biology. Crossings from low-density to high-density equilibria are often associated with pest outbreaks, while the opposite crossings are often associated with population collapse of harvested species. Here I use a simple, bistable model to demonstrate a technique for estimating mean first passage times (MFPT) of thresholds, including boundaries between stable equilibria. The approach is based on stochastic "shot-noise" perturbations to the population and the MFPTs compare favorably with mean crossing times from Monte Carlo numerical solutions of the stochastically perturbed model. This agreement suggests that MFPT approximations can be used to quantify expected effects of species manipulations, whether the goal is pest control or sustainable harvest.

  6. Using Uncertainty Quantification to Guide Development and Improvements of a Regional-Scale Model of the Coastal Lowlands Aquifer System Spanning Texas, Louisiana, Mississippi, Alabama and Florida

    NASA Astrophysics Data System (ADS)

    Foster, L. K.; Clark, B. R.; Duncan, L. L.; Tebo, D. T.; White, J.

    2017-12-01

    Several historical groundwater models exist within the Coastal Lowlands Aquifer System (CLAS), which spans the Gulf Coastal Plain in Texas, Louisiana, Mississippi, Alabama, and Florida. The largest of these models, called the Gulf Coast Regional Aquifer System Analysis (RASA) model, has been brought into a new framework using the Newton formulation for MODFLOW-2005 (MODFLOW-NWT) and serves as the starting point of a new investigation underway by the U.S. Geological Survey to improve understanding of the CLAS and provide predictions of future groundwater availability within an uncertainty quantification (UQ) framework. The use of an UQ framework will not only provide estimates of water-level observation worth, hydraulic parameter uncertainty, boundary-condition uncertainty, and uncertainty of future potential predictions, but it will also guide the model development process. Traditionally, model development proceeds from dataset construction to the process of deterministic history matching, followed by deterministic predictions using the model. This investigation will combine the use of UQ with existing historical models of the study area to assess in a quantitative framework the effect model package and property improvements have on the ability to represent past-system states, as well as the effect on the model's ability to make certain predictions of water levels, water budgets, and base-flow estimates. Estimates of hydraulic property information and boundary conditions from the existing models and literature, forming the prior, will be used to make initial estimates of model forecasts and their corresponding uncertainty, along with an uncalibrated groundwater model run within an unconstrained Monte Carlo analysis. First-Order Second-Moment (FOSM) analysis will also be used to investigate parameter and predictive uncertainty, and guide next steps in model development prior to rigorous history matching by using PEST++ parameter estimation code.

  7. Algorithm for improving psychophysical threshold estimates by detecting sustained inattention in experiments using PEST.

    PubMed

    Rinderknecht, Mike D; Ranzani, Raffaele; Popp, Werner L; Lambercy, Olivier; Gassert, Roger

    2018-05-10

    Psychophysical procedures are applied in various fields to assess sensory thresholds. During experiments, sampled psychometric functions are usually assumed to be stationary. However, perception can be altered, for example by loss of attention to the presentation of stimuli, leading to biased data, which results in poor threshold estimates. The few existing approaches attempting to identify non-stationarities either detect only whether there was a change in perception, or are not suitable for experiments with a relatively small number of trials (e.g., [Formula: see text] 300). We present a method to detect inattention periods on a trial-by-trial basis with the aim of improving threshold estimates in psychophysical experiments using the adaptive sampling procedure Parameter Estimation by Sequential Testing (PEST). The performance of the algorithm was evaluated in computer simulations modeling inattention, and tested in a behavioral experiment on proprioceptive difference threshold assessment in 20 stroke patients, a population where attention deficits are likely to be present. Simulations showed that estimation errors could be reduced by up to 77% for inattentive subjects, even in sequences with less than 100 trials. In the behavioral data, inattention was detected in 14% of assessments, and applying the proposed algorithm resulted in reduced test-retest variability in 73% of these corrected assessments pairs. The novel algorithm complements existing approaches and, besides being applicable post hoc, could also be used online to prevent collection of biased data. This could have important implications in assessment practice by shortening experiments and improving estimates, especially for clinical settings.

  8. The Sensitivity of Adverse Event Cost Estimates to Diagnostic Coding Error

    PubMed Central

    Wardle, Gavin; Wodchis, Walter P; Laporte, Audrey; Anderson, Geoffrey M; Baker, Ross G

    2012-01-01

    Objective To examine the impact of diagnostic coding error on estimates of hospital costs attributable to adverse events. Data Sources Original and reabstracted medical records of 9,670 complex medical and surgical admissions at 11 hospital corporations in Ontario from 2002 to 2004. Patient specific costs, not including physician payments, were retrieved from the Ontario Case Costing Initiative database. Study Design Adverse events were identified among the original and reabstracted records using ICD10-CA (Canadian adaptation of ICD10) codes flagged as postadmission complications. Propensity score matching and multivariate regression analysis were used to estimate the cost of the adverse events and to determine the sensitivity of cost estimates to diagnostic coding error. Principal Findings Estimates of the cost of the adverse events ranged from $16,008 (metabolic derangement) to $30,176 (upper gastrointestinal bleeding). Coding errors caused the total cost attributable to the adverse events to be underestimated by 16 percent. The impact of coding error on adverse event cost estimates was highly variable at the organizational level. Conclusions Estimates of adverse event costs are highly sensitive to coding error. Adverse event costs may be significantly underestimated if the likelihood of error is ignored. PMID:22091908

  9. Identification of Putative Olfactory Genes from the Oriental Fruit Moth Grapholita molesta via an Antennal Transcriptome Analysis

    PubMed Central

    Li, Yiping; Wu, Junxiang

    2015-01-01

    Background The oriental fruit moth, Grapholita molesta, is an extremely important oligophagous pest species of stone and pome fruits throughout the world. As a host-switching species, adult moths, especially females, depend on olfactory cues to a large extent in locating host plants, finding mates, and selecting oviposition sites. The identification of olfactory genes can facilitate investigation on mechanisms for chemical communications. Methodology/Principal Finding We generated transcriptome of female antennae of G.molesta using the next-generation sequencing technique, and assembled transcripts from RNA-seq reads using Trinity, SOAPdenovo-trans and Abyss-trans assemblers. We identified 124 putative olfactory genes. Among the identified olfactory genes, 118 were novel to this species, including 28 transcripts encoding for odorant binding proteins, 17 chemosensory proteins, 48 odorant receptors, four gustatory receptors, 24 ionotropic receptors, two sensory neuron membrane proteins, and one odor degrading enzyme. The identified genes were further confirmed through semi-quantitative reverse transcription PCR for transcripts coding for 26 OBPs and 17 CSPs. OBP transcripts showed an obvious antenna bias, whereas CSP transcripts were detected in different tissues. Conclusion Antennal transcriptome data derived from the oriental fruit moth constituted an abundant molecular resource for the identification of genes potentially involved in the olfaction process of the species. This study provides a foundation for future research on the molecules involved in olfactory recognition of this insect pest, and in particular, the feasibility of using semiochemicals to control this pest. PMID:26540284

  10. Estimating the costs of VA ambulatory care.

    PubMed

    Phibbs, Ciaran S; Bhandari, Aman; Yu, Wei; Barnett, Paul G

    2003-09-01

    This article reports how we matched Common Procedure Terminology (CPT) codes with Medicare payment rates and aggregate Veterans Affairs (VA) budget data to estimate the costs of every VA ambulatory encounter. Converting CPT codes to encounter-level costs was more complex than a simple match of Medicare reimbursements to CPT codes. About 40 percent of the CPT codes used in VA, representing about 20 percent of procedures, did not have a Medicare payment rate and required other cost estimates. Reconciling aggregated estimated costs to the VA budget allocations for outpatient care produced final VA cost estimates that were lower than projected Medicare reimbursements. The methods used to estimate costs for encounters could be replicated for other settings. They are potentially useful for any system that does not generate billing data, when CPT codes are simpler to collect than billing data, or when there is a need to standardize cost estimates across data sources.

  11. Mechanisms of haplotype divergence at the RGA08 nucleotide-binding leucine-rich repeat gene locus in wild banana (Musa balbisiana)

    PubMed Central

    2010-01-01

    Background Comparative sequence analysis of complex loci such as resistance gene analog clusters allows estimating the degree of sequence conservation and mechanisms of divergence at the intraspecies level. In banana (Musa sp.), two diploid wild species Musa acuminata (A genome) and Musa balbisiana (B genome) contribute to the polyploid genome of many cultivars. The M. balbisiana species is associated with vigour and tolerance to pests and disease and little is known on the genome structure and haplotype diversity within this species. Here, we compare two genomic sequences of 253 and 223 kb corresponding to two haplotypes of the RGA08 resistance gene analog locus in M. balbisiana "Pisang Klutuk Wulung" (PKW). Results Sequence comparison revealed two regions of contrasting features. The first is a highly colinear gene-rich region where the two haplotypes diverge only by single nucleotide polymorphisms and two repetitive element insertions. The second corresponds to a large cluster of RGA08 genes, with 13 and 18 predicted RGA genes and pseudogenes spread over 131 and 152 kb respectively on each haplotype. The RGA08 cluster is enriched in repetitive element insertions, in duplicated non-coding intergenic sequences including low complexity regions and shows structural variations between haplotypes. Although some allelic relationships are retained, a large diversity of RGA08 genes occurs in this single M. balbisiana genotype, with several RGA08 paralogs specific to each haplotype. The RGA08 gene family has evolved by mechanisms of unequal recombination, intragenic sequence exchange and diversifying selection. An unequal recombination event taking place between duplicated non-coding intergenic sequences resulted in a different RGA08 gene content between haplotypes pointing out the role of such duplicated regions in the evolution of RGA clusters. Based on the synonymous substitution rate in coding sequences, we estimated a 1 million year divergence time for these M. balbisiana haplotypes. Conclusions A large RGA08 gene cluster identified in wild banana corresponds to a highly variable genomic region between haplotypes surrounded by conserved flanking regions. High level of sequence identity (70 to 99%) of the genic and intergenic regions suggests a recent and rapid evolution of this cluster in M. balbisiana. PMID:20637079

  12. Important Insect Pests of Fruit - Important Insect Pests of Nuts - Field Crop Insect Pests - Insect Pests of Vegetable Crops.

    ERIC Educational Resources Information Center

    Gesell, Stanley G.; And Others

    This document consists of four agriculture extension service publications from Pennsylvania State University. The titles are: (1) Important Insect Pests of Fruit; (2) Important Insect Pests of Nuts; (3) Field Crop Insect Pests; and (4) Insect Pests of Vegetable Crops. The first publication gives the hosts, injury, and description of 22 insect…

  13. Silencing the HaHR3 Gene by Transgenic Plant-mediated RNAi to Disrupt Helicoverpa armigera Development

    PubMed Central

    Xiong, Yehui; Zeng, Hongmei; Zhang, Yuliang; Xu, Dawei; Qiu, Dewen

    2013-01-01

    RNA interference (RNAi) caused by exogenous double-stranded RNA (dsRNA) has developed into a powerful technique in functional genomics, and to date it is widely used to down-regulate crucial physiology-related genes to control pest insects. A molt-regulating transcription factor gene, HaHR3, of cotton bollworm (Helicoverpa armigera) was selected as the target gene. Four different fragments covering the coding sequence (CDS) of HaHR3 were cloned into vector L4440 to express dsRNAs in Escherichia coli. The most effective silencing fragment was then cloned into a plant over-expression vector to express a hairpin RNA (hpRNA) in transgenic tobacco (Nicotiana tabacum). When H. armigera larvae were fed the E. coli or transgenic plants, the HaHR3 mRNA and protein levels dramatically decreased, resulting developmental deformity and larval lethality. The results demonstrate that both recombinant bacteria and transgenic plants could induce HaHR3 silence to disrupt H. armigera development, transgenic plant-mediated RNAi is emerging as a powerful approach for controlling insect pests. PMID:23630449

  14. The economic impact of peste des petits ruminants in India.

    PubMed

    Bardhan, D; Kumar, S; Anandsekaran, G; Chaudhury, J K; Meraj, M; Singh, R K; Verma, M R; Kumar, D; Kumar P T, N; Ahmed Lone, S; Mishra, V; Mohanty, B S; Korade, N; De, U K

    2017-04-01

    Peste des petits ruminants (PPR) is an economically important livestock disease which affects a vast section of the small ruminant population in India. However, data on the incidence of PPR are limited and scant literature is available on the economic losses caused by the disease. In the present study, a structured sampling design was adopted, which covered the major agro-climatic regions of the country, to ascertain the morbidity and mortality rates of PPR. Available estimates of the economic losses in India due to various livestock diseases are based on single values of various epidemiological and economic parameters. Stochastic modelling was used to estimate the economic impact of PPR. Overall annual morbidity and mortality rates of PPR for small ruminants in India have been estimated from the sample as being 8%and 3.45%, respectively. The authors have analysed variations in these rates across species, age group, sex, season and region. The expected annual economic loss due to PPR in India ranges from as little as US $2 million to $18 million and may go up to US $1.5 billion; the most likely range of expected economic losses is between US $653 million and $669 million. This study thus reveals significant losses due to the incidence of PPR in small ruminants in India.

  15. Population-level effects of fitness costs associated with repressible female-lethal transgene insertions in two pest insects

    PubMed Central

    Harvey-Samuel, Tim; Ant, Thomas; Gong, Hongfei; Morrison, Neil I; Alphey, Luke

    2014-01-01

    Genetic control strategies offer great potential for the sustainable and effective control of insect pests. These strategies involve the field release of transgenic insects with the aim of introducing engineered alleles into wild populations, either permanently or transiently. Their efficacy can therefore be reduced if transgene-associated fitness costs reduce the relative performance of released insects. We describe a method of measuring the fitness costs associated with transgenes by analyzing their evolutionary trajectories when placed in competition with wild-type alleles in replicated cage populations. Using this method, we estimated lifetime fitness costs associated with two repressible female-lethal transgenes in the diamondback moth and olive fly as being acceptable for field suppression programs. Furthermore, using these estimates of genotype-level fitness costs, we were able to project longer-term evolutionary trajectories for the transgenes investigated. Results from these projections demonstrate that although transgene-associated fitness costs will ultimately cause these transgenes to become extinct, even when engineered lethality is repressed, they may persist for varying periods of time before doing so. This implies that tetracycline-mediated transgene field persistence in these strains is unlikely and suggests that realistic estimates of transgene-associated fitness costs may be useful in trialing ‘uncoupled’ gene drive system components in the field. PMID:24944572

  16. Evaluation of the environmental impact of apple pest control strategies using pesticide risk indicators.

    PubMed

    Ioriatti, Claudio; Agnello, Arthur M; Martini, Fabrizio; Kovach, Joseph

    2011-10-01

    Various pesticide risk indicators have been developed for estimating pesticide impact on human health and the environment. The present work applied a pesticide risk indicator to estimate change in pesticide risk in apple production between 2001 and 2009. The "Environmental Impact Quotient" was used, which evaluates potential impacts of pesticide active ingredients on farm workers, consumers, and nontarget organisms. A modified Environmental Impact Quotient was also tested, which accounts for all ingredients in the formulation presenting a health or environmental hazard, as identified in the Security Data Sheet. Irrespective of the rating system applied, an overall average improvement in environmental impact of apple protection strategies was indicated ranging from 23 to 24%. Hazard reduction was more significant when estimated per treatment, and was higher for acaricides and insecticides than for fungicides. Improvement appeared to be a consequence of using more selective and more effective active ingredients, applying alternative pest control techniques, compulsory periodic sprayer calibration, and wider use of dwarfing orchards. The modified Environmental Impact Quotient does not overcome all limitations regarding accuracy of pesticide risk indicators, but its ease of use in relying on official, easily accessible data, and the consistency of its results, makes it a good candidate for monitoring the success of reduced risk policies. Copyright © 2011 SETAC.

  17. Population-level effects of fitness costs associated with repressible female-lethal transgene insertions in two pest insects.

    PubMed

    Harvey-Samuel, Tim; Ant, Thomas; Gong, Hongfei; Morrison, Neil I; Alphey, Luke

    2014-05-01

    Genetic control strategies offer great potential for the sustainable and effective control of insect pests. These strategies involve the field release of transgenic insects with the aim of introducing engineered alleles into wild populations, either permanently or transiently. Their efficacy can therefore be reduced if transgene-associated fitness costs reduce the relative performance of released insects. We describe a method of measuring the fitness costs associated with transgenes by analyzing their evolutionary trajectories when placed in competition with wild-type alleles in replicated cage populations. Using this method, we estimated lifetime fitness costs associated with two repressible female-lethal transgenes in the diamondback moth and olive fly as being acceptable for field suppression programs. Furthermore, using these estimates of genotype-level fitness costs, we were able to project longer-term evolutionary trajectories for the transgenes investigated. Results from these projections demonstrate that although transgene-associated fitness costs will ultimately cause these transgenes to become extinct, even when engineered lethality is repressed, they may persist for varying periods of time before doing so. This implies that tetracycline-mediated transgene field persistence in these strains is unlikely and suggests that realistic estimates of transgene-associated fitness costs may be useful in trialing 'uncoupled' gene drive system components in the field.

  18. An algorithm for quantitatively estimating non-occupational pesticide exposure intensity for spouses in the Agricultural Health Study

    EPA Science Inventory

    Purpose: Women living or working on farms may be exposed to pesticides from direct occupational use of agricultural pesticides and from non-occupational pathways, such as take-home exposure from skin, clothes and shoes of farmworkers, drift from nearby fields, and pest treatments...

  19. Field estimates of attraction of Ceratitis capitata to Trimedlure and Bactrocera dorsalis (Diptera: Tephritidae) to methyl eugenol in varying environments

    USDA-ARS?s Scientific Manuscript database

    Measuring and modeling the attractiveness of semiochemical-baited traps is of significant importance to detection, delimitation and control of invasive pests. Here we describe the results of field mark-release-recapture experiments with Ceratitis capitata (Wiedemann) and Bactrocera dorsalis (Hendel)...

  20. Landscape effects on reproduction of Euschistus servus (Hemiptera: Pentatomidae), a mobile, polyphagous, multivoltine arthropod herbivore

    USDA-ARS?s Scientific Manuscript database

    The brown stink bug is an economic pest of many crops in the southeastern US. In this study we characterized the complexity, land-use intensity and distances between differently-cropped fields on landscapes in two regions of southern Georgia, USA. We estimated brown stink bug reproduction, predator ...

  1. 76 FR 13968 - Notice of Request for Extension of Approval of an Information Collection; Pine Shoot Beetle; Host...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-03-15

    ... the introduction of plant pests. Subpart--Nursery Stock, Plants, Roots, Bulbs, Seeds, and Other Plant..., plant parts, and seeds for propagation; and Subpart-- Logs, Lumber, and Other Unmanufactured Wood... per response. Respondents: Christmas tree and nursery industry. Estimated annual number of respondents...

  2. Estimating potential stylet penetration of southern green stink bug (Hemiptera: Pentatomidae) - A mathematical modeling approach

    USDA-ARS?s Scientific Manuscript database

    Southern green stink bugs, Nezara viridula (L.), and related species are significant pests of cotton in the U.S. Cotton Belt. Using their stylets, adults introduce disease pathogens of cotton into cotton bolls, and preliminary data indicates nymphs can also ingest these pathogens. Data is lacking ...

  3. 76 FR 50451 - Submission for OMB Review; Comment Request

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-08-15

    ... practical utility; (b) the accuracy of the agency's estimate of burden including the validity of the... the United States from Canada. Pine shoot beetle (PSB) is a pest of pine trees. It can cause damage in weak and dying trees where reproductive and immature stages of PSB occur, and in the new growth of...

  4. Psychometric Function Reconstruction from Adaptive Tracking Procedures

    DTIC Science & Technology

    1988-11-29

    reduced variability and length of the track can be shown by the use of the "sweat factor" defined by Taylor and Creelman (1967). This is a measure of...Psychophysics, 35, 385-392. Taylor, M. M., and Creelman , C. D. (1967). PEST: Efficient estimates on probability functions. Journal of the Acoustical Society of

  5. Image Perception Wavelet Simulation and Enhancement for the Visually Impaired.

    DTIC Science & Technology

    1994-12-01

    and Computational Harmonic Analysis, 1:54-81 (1993). 6. Cornsweet, Tom N. "The Staircase-Method in Psychophysics," The American Journal of Psychology ...of a Visual Model," Proceedings of the IEEE, 60(7):828-842 (July 1972). 33. Taylor, M. M. and C Douglas Creelman . "PEST: Efficient Estimates on

  6. Iowa's forest resources in 2000

    Treesearch

    Joseph T. II Boykin

    2003-01-01

    Results of the 2000 annual inventory of Iowa show that there are as estimated 2.5 million acres of forest land; 3.2 billion cubic feet of all live volume on timberland; and 87 million dry tons of all live aboveground tree biomass on timberland. Known pathogens and pests in Iowa's forets include oak wilt and gypsy moth.

  7. Overexpression of a soybean salicylic acid methlyltransferase gene confers resistance to soybean cyst nematode

    USDA-ARS?s Scientific Manuscript database

    Soybean cyst nematode (Heterodera glycines Ichinohe, SCN) is the most pervasive pest of soybean [Glycine max (L.) Merr.] in the USA and worldwide. SCN reduced soybean yields worldwide by an estimated billion dollars annually. These losses remained stable with the use of resistant cultivars but over ...

  8. Efforts to estimate pesticide degradation rates in subsurface vadose and aquifer materials

    EPA Science Inventory

    When pesticides are used in real-world settings, the objective is to be effective in pest eradication at the site of application, but also it is desired that the pesticide have minimal persistence and mobility as it migrates away from the application site. At the site of applicat...

  9. Tidal Mixing Box Submodel for Tampa Bay: Calibration of Tidal Exchange Flows with the Parameter Estimation Tool (PEST)

    EPA Science Inventory

    In the mid-1990s the Tampa Bay Estuary Program proposed a nutrient reduction strategy focused on improving water clarity to promote seagrass expansion within Tampa Bay. A System Dynamics Model is being developed to evaluate spatially and temporally explicit impacts of nutrient r...

  10. Gut content analysis of arthropod predators of codling moth in Washington apple orchards

    USDA-ARS?s Scientific Manuscript database

    More than 70% of pome fruits in the USA are produced in central Washington State. The codling moth, Cydia pomonella (L.) is consistently the most damaging pest. We used polymerase chain reaction (PCR) to amplify codling moth DNA in 2591 field-collected arthropod predators to estimate predation in s...

  11. Simulations of Brady's-Type Fault Undergoing CO2 Push-Pull: Pressure-Transient and Sensitivity Analysis

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Jung, Yoojin; Doughty, Christine

    Input and output files used for fault characterization through numerical simulation using iTOUGH2. The synthetic data for the push period are generated by running a forward simulation (input parameters are provided in iTOUGH2 Brady GF6 Input Parameters.txt [InvExt6i.txt]). In general, the permeability of the fault gouge, damage zone, and matrix are assumed to be unknown. The input and output files are for the inversion scenario where only pressure transients are available at the monitoring well located 200 m above the injection well and only the fault gouge permeability is estimated. The input files are named InvExt6i, INPUT.tpl, FOFT.ins, CO2TAB, andmore » the output files are InvExt6i.out, pest.fof, and pest.sav (names below are display names). The table graphic in the data files below summarizes the inversion results, and indicates the fault gouge permeability can be estimated even if imperfect guesses are used for matrix and damage zone permeabilities, and permeability anisotropy is not taken into account.« less

  12. FRAGS: estimation of coding sequence substitution rates from fragmentary data

    PubMed Central

    Swart, Estienne C; Hide, Winston A; Seoighe, Cathal

    2004-01-01

    Background Rates of substitution in protein-coding sequences can provide important insights into evolutionary processes that are of biomedical and theoretical interest. Increased availability of coding sequence data has enabled researchers to estimate more accurately the coding sequence divergence of pairs of organisms. However the use of different data sources, alignment protocols and methods to estimate substitution rates leads to widely varying estimates of key parameters that define the coding sequence divergence of orthologous genes. Although complete genome sequence data are not available for all organisms, fragmentary sequence data can provide accurate estimates of substitution rates provided that an appropriate and consistent methodology is used and that differences in the estimates obtainable from different data sources are taken into account. Results We have developed FRAGS, an application framework that uses existing, freely available software components to construct in-frame alignments and estimate coding substitution rates from fragmentary sequence data. Coding sequence substitution estimates for human and chimpanzee sequences, generated by FRAGS, reveal that methodological differences can give rise to significantly different estimates of important substitution parameters. The estimated substitution rates were also used to infer upper-bounds on the amount of sequencing error in the datasets that we have analysed. Conclusion We have developed a system that performs robust estimation of substitution rates for orthologous sequences from a pair of organisms. Our system can be used when fragmentary genomic or transcript data is available from one of the organisms and the other is a completely sequenced genome within the Ensembl database. As well as estimating substitution statistics our system enables the user to manage and query alignment and substitution data. PMID:15005802

  13. Status of Aceria guerreronis Keifer (Acari: Eriophyidae) as a pest of coconut in the state of Sao Paulo, southeastern Brazil.

    PubMed

    Oliveira, D C; de Moraes, G J; Dias, C T S

    2012-08-01

    The coconut mite, Aceria guerreronis Keifer, is one of the main pests of coconut palms (Cocos nucifera) in northeastern Brazil. The objective of this study was to evaluate the levels of the coconut mite and other mites on coconut palms in the state of São Paulo and to estimate the possible role of predatory mites in the control of this pest. The effect of cultivated genotypes and sampling dates on the mite populations was also estimated. We sampled attached fruits, leaflets, inflorescences, and fallen fruits. The coconut mite was the main phytophagous mite found on attached and fallen fruits, with average densities of 110.0 and 20.5 mites per fruit, respectively. The prevalent predatory mites on attached and fallen fruits were Proctolaelaps bulbosus Moraes, Reis & Gondim Jr. and Proctolaelaps bickleyi (Bram), both Melicharidae. On leaflets, the tenuipalpids Brevipalpus phoenicis (Geijsks) and Tenuipalpus coyacus De Leon and the tetranychid Oligonychus modestus (Banks) were the predominant phytophagous mites. On both leaflets and inflorescences, the predominant predatory mites belonged to the Phytoseiidae. Neoseiulus baraki (Athias-Henriot) and Neoseiulus paspalivorus (De Leon), predators widely associated with the coconut mite in northeastern Brazil and several other countries, were not found. The low densities of the coconut mite in São Paulo could be related to prevailing climatic conditions, scarcity of coconut plantations (hampering the dispersion of the coconut mite between fields), and to the fact that some of the genotypes cultivated in the region are unfavorable for its development.

  14. A Fixed-Precision Sequential Sampling Plan for the Potato Tuberworm Moth, Phthorimaea operculella Zeller (Lepidoptera: Gelechidae), on Potato Cultivars.

    PubMed

    Shahbi, M; Rajabpour, A

    2017-08-01

    Phthorimaea operculella Zeller is an important pest of potato in Iran. Spatial distribution and fixed-precision sequential sampling for population estimation of the pest on two potato cultivars, Arinda ® and Sante ® , were studied in two separate potato fields during two growing seasons (2013-2014 and 2014-2015). Spatial distribution was investigated by Taylor's power law and Iwao's patchiness. Results showed that the spatial distribution of eggs and larvae was random. In contrast to Iwao's patchiness, Taylor's power law provided a highly significant relationship between variance and mean density. Therefore, fixed-precision sequential sampling plan was developed by Green's model at two precision levels of 0.25 and 0.1. The optimum sample size on Arinda ® and Sante ® cultivars at precision level of 0.25 ranged from 151 to 813 and 149 to 802 leaves, respectively. At 0.1 precision level, the sample sizes varied from 5083 to 1054 and 5100 to 1050 leaves for Arinda ® and Sante ® cultivars, respectively. Therefore, the optimum sample sizes for the cultivars, with different resistance levels, were not significantly different. According to the calculated stop lines, the sampling must be continued until cumulative number of eggs + larvae reached to 15-16 or 96-101 individuals at precision levels of 0.25 or 0.1, respectively. The performance of the sampling plan was validated by resampling analysis using resampling for validation of sampling plans software. The sampling plant provided in this study can be used to obtain a rapid estimate of the pest density with minimal effort.

  15. Exploring the effects of data quality, data worth, and redundancy of CO2 gas pressure and saturation data on reservoir characterization through PEST Inversion

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Fang, Zhufeng; Hou, Zhangshuan; Lin, Guang

    2014-04-01

    This study examined the impacts of reservoir properties on CO2 migration after subsurface injection and evaluated the possibility of characterizing reservoir properties using CO2 monitoring data such as saturation distribution. The injection reservoir was assumed to be located 1400-1500 m below the ground surface such that CO2 remained in the supercritical state. The reservoir was assumed to contain layers with alternating conductive and resistive properties, which is analogous to actual geological formations such as the Mount Simon Sandstone unit. The CO2 injection simulation used a cylindrical grid setting in which the injection well was situated at the center of themore » domain, which extended up to 8000 m from the injection well. The CO2 migration was simulated using the PNNL-developed simulator STOMP-CO2e (the water-salt-CO2 module). We adopted a nonlinear parameter estimation and optimization modeling software package, PEST, for automated reservoir parameter estimation. We explored the effects of data quality, data worth, and data redundancy on the detectability of reservoir parameters using CO2 saturation monitoring data, by comparing PEST inversion results using data with different levels of noises, various numbers of monitoring wells and locations, and different data collection spacing and temporal sampling intervals. This study yielded insight into the use of CO2 saturation monitoring data for reservoir characterization and how to design the monitoring system to optimize data worth and reduce data redundancy.« less

  16. Increasing corn for biofuel production reduces biocontrol services in agricultural landscapes

    PubMed Central

    Landis, Douglas A.; Gardiner, Mary M.; van der Werf, Wopke; Swinton, Scott M.

    2008-01-01

    Increased demand for corn grain as an ethanol feedstock is altering U.S. agricultural landscapes and the ecosystem services they provide. From 2006 to 2007, corn acreage increased 19% nationally, resulting in reduced crop diversity in many areas. Biological control of insects is an ecosystem service that is strongly influenced by local landscape structure. Here, we estimate the value of natural biological control of the soybean aphid, a major pest in agricultural landscapes, and the economic impacts of reduced biocontrol caused by increased corn production in 4 U.S. states (Iowa, Michigan, Minnesota, and Wisconsin). For producers who use an integrated pest management strategy including insecticides as needed, natural suppression of soybean aphid in soybean is worth an average of $33 ha−1. At 2007–2008 prices these services are worth at least $239 million y−1 in these 4 states. Recent biofuel-driven growth in corn planting results in lower landscape diversity, altering the supply of aphid natural enemies to soybean fields and reducing biocontrol services by 24%. This loss of biocontrol services cost soybean producers in these states an estimated $58 million y−1 in reduced yield and increased pesticide use. For producers who rely solely on biological control, the value of lost services is much greater. These findings from a single pest in 1 crop suggest that the value of biocontrol services to the U.S. economy may be underestimated. Furthermore, we suggest that development of cellulosic ethanol production processes that use a variety of feedstocks could foster increased diversity in agricultural landscapes and enhance arthropod-mediated ecosystem services. PMID:19075234

  17. Spatial variability in ecosystem services: simple rules for predator-mediated pest suppression.

    PubMed

    Bianchi, F J J A; Schellhorn, N A; Buckley, Y M; Possingham, H P

    2010-12-01

    Agricultural pest control often relies on the ecosystem services provided by the predators of pests. Appropriate landscape and habitat management for pest control services requires an understanding of insect dispersal abilities and the spatial arrangement of source habitats for pests and their predators. Here we explore how dispersal and habitat configuration determine the locations where management actions are likely to have the biggest impact on natural pest control. The study focuses on the early colonization phase before predator reproduction takes place and when pest populations in crops are still relatively low. We developed a spatially explicit simulation model in which pest populations grow exponentially in pest patches and predators disperse across the landscape from predator patches. We generated 1000 computer-simulated landscapes in which the performance of four typical but different predator groups as biological control agents was evaluated. Predator groups represented trait combinations of poor and good dispersal ability and density-independent and density-dependent aggregation responses toward pests. Case studies from the literature were used to inform the parameterization of predator groups. Landscapes with a small nearest-neighbor distance between pest and predator patches had the lowest mean pest density at the landscape scale for all predator groups, but there can be high variation in pest density between the patches within these landscapes. Mobile and strongly aggregating predators provide the best pest suppression in the majority of landscape types. Ironically, this result is true except in landscapes with small nearest-neighbor distances between pest and predator patches. The pest control potential of mobile predators can best be explained by the mean distance between a pest patch and all predator patches in the landscape, whereas for poorly dispersing predators the distance between a pest patch and the nearest predator patch is the best explanatory variable. In conclusion, the spatial arrangement of source habitats for natural enemies of agricultural pest species can have profound effects on their potential to colonize crops and suppress pest populations.

  18. RADTRAD: A simplified model for RADionuclide Transport and Removal And Dose estimation

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Humphreys, S.L.; Miller, L.A.; Monroe, D.K.

    1998-04-01

    This report documents the RADTRAD computer code developed for the U.S. Nuclear Regulatory Commission (NRC) Office of Nuclear Reactor Regulation (NRR) to estimate transport and removal of radionuclides and dose at selected receptors. The document includes a users` guide to the code, a description of the technical basis for the code, the quality assurance and code acceptance testing documentation, and a programmers` guide. The RADTRAD code can be used to estimate the containment release using either the NRC TID-14844 or NUREG-1465 source terms and assumptions, or a user-specified table. In addition, the code can account for a reduction in themore » quantity of radioactive material due to containment sprays, natural deposition, filters, and other natural and engineered safety features. The RADTRAD code uses a combination of tables and/or numerical models of source term reduction phenomena to determine the time-dependent dose at user-specified locations for a given accident scenario. The code system also provides the inventory, decay chain, and dose conversion factor tables needed for the dose calculation. The RADTRAD code can be used to assess occupational radiation exposures, typically in the control room; to estimate site boundary doses; and to estimate dose attenuation due to modification of a facility or accident sequence.« less

  19. Characterization of the Earwig, Doru lineare, as a Predator of Larvae of the Fall Armyworm, Spodoptera frugiperda: A Functional Response Study

    PubMed Central

    Sueldo, Mabel Romero; Bruzzone, Octavio A.; Virla, Eduardo G.

    2010-01-01

    Spodoptera frugiperda Smith (Lepidoptera: Noctuidae) is considered as the most important pest of maize in almost all tropical America. In Argentina, the earwig Doru lineare Eschscholtz (Dermaptera: Forficulidae) has been observed preying on S. frugiperda egg masses in corn crops, but no data about its potential role as a biocontrol agent of this pest have been provided. The predation efficiency of D. lineare on newly emerged S. frugiperda larva was evaluated through a laboratory functional response study. D. lineare showed type II functional response to S. frugiperda larval density, and disc equation estimations of searching efficiency and handling time were (a) = 0.374 and (t) = 182.9 s, respectively. Earwig satiation occurred at 39.4 S. frugiperda larvae. PMID:20575739

  20. Camera traps and activity signs to estimate wild boar density and derive abundance indices.

    PubMed

    Massei, Giovanna; Coats, Julia; Lambert, Mark Simon; Pietravalle, Stephane; Gill, Robin; Cowan, Dave

    2018-04-01

    Populations of wild boar and feral pigs are increasing worldwide, in parallel with their significant environmental and economic impact. Reliable methods of monitoring trends and estimating abundance are needed to measure the effects of interventions on population size. The main aims of this study, carried out in five English woodlands were: (i) to compare wild boar abundance indices obtained from camera trap surveys and from activity signs; and (ii) to assess the precision of density estimates in relation to different densities of camera traps. For each woodland, we calculated a passive activity index (PAI) based on camera trap surveys, rooting activity and wild boar trails on transects, and estimated absolute densities based on camera trap surveys. PAIs obtained using different methods showed similar patterns. We found significant between-year differences in abundance of wild boar using PAIs based on camera trap surveys and on trails on transects, but not on signs of rooting on transects. The density of wild boar from camera trap surveys varied between 0.7 and 7 animals/km 2 . Increasing the density of camera traps above nine per km 2 did not increase the precision of the estimate of wild boar density. PAIs based on number of wild boar trails and on camera trap data appear to be more sensitive to changes in population size than PAIs based on signs of rooting. For wild boar densities similar to those recorded in this study, nine camera traps per km 2 are sufficient to estimate the mean density of wild boar. © 2017 Crown copyright. Pest Management Science © 2017 Society of Chemical Industry. © 2017 Crown copyright. Pest Management Science © 2017 Society of Chemical Industry.

  1. Industrial and Institutional Pest Control. Sale Publication 4073.

    ERIC Educational Resources Information Center

    Wamsley, Mary Ann, Ed.; Vermeire, Donna M., Ed.

    This guide gives information needed to meet Environmental Protection Agency standards on industrial and institutional pest control, and to help prepare for certification. It gives descriptions and pictures of general insect pests, parasitic pests of man, occasional invaders, wood-destroying pests, stored product pests, vertebrates, and weeds. The…

  2. Towards integrated pest management in red clover seed production.

    PubMed

    Lundin, Ola; Rundlöf, Maj; Smith, Henrik G; Bommarco, Riccardo

    2012-10-01

    The development of integrated pest management is hampered by lack of information on how insect pest abundances relate to yield losses, and how pests are affected by control measures. In this study, we develop integrated pest management tactics for Apion spp. weevils (Coleoptera: Brentidae) in seed production of red clover, Trifolium pratense L. We tested a method to forecast pest damage, quantified the relationship between pest abundance and yield, and evaluated chemical and biological pest control in 29 Swedish red clover fields in 2008 and 2011. Pest inflorescence abundance, which had a highly negative effect on yield, could be predicted with pan trap catches of adult pests. In 2008, chemical control with typically one application of pyrethroids was ineffective both in decreasing pest abundances and in increasing yields. In 2011, when chemical control included applications of the neonicotinoid thiacloprid, pest abundances decreased and yields increased considerably in treated field zones. A post hoc analysis indicated that using pyrethroids in addition to thiacloprid was largely redundant. Infestation rates by parasitoids was higher and reached average levels of around 40% in insecticide treated field zones in 2011, which is a level of interest for biological pest control. Based on the data presented, an economic threshold for chemical control is developed, and guidelines are provided on minimum effective chemical pest control.

  3. Inverse modeling with RZWQM2 to predict water quality

    USGS Publications Warehouse

    Nolan, Bernard T.; Malone, Robert W.; Ma, Liwang; Green, Christopher T.; Fienen, Michael N.; Jaynes, Dan B.

    2011-01-01

    This chapter presents guidelines for autocalibration of the Root Zone Water Quality Model (RZWQM2) by inverse modeling using PEST parameter estimation software (Doherty, 2010). Two sites with diverse climate and management were considered for simulation of N losses by leaching and in drain flow: an almond [Prunus dulcis (Mill.) D.A. Webb] orchard in the San Joaquin Valley, California and the Walnut Creek watershed in central Iowa, which is predominantly in corn (Zea mays L.)–soybean [Glycine max (L.) Merr.] rotation. Inverse modeling provides an objective statistical basis for calibration that involves simultaneous adjustment of model parameters and yields parameter confidence intervals and sensitivities. We describe operation of PEST in both parameter estimation and predictive analysis modes. The goal of parameter estimation is to identify a unique set of parameters that minimize a weighted least squares objective function, and the goal of predictive analysis is to construct a nonlinear confidence interval for a prediction of interest by finding a set of parameters that maximizes or minimizes the prediction while maintaining the model in a calibrated state. We also describe PEST utilities (PAR2PAR, TSPROC) for maintaining ordered relations among model parameters (e.g., soil root growth factor) and for post-processing of RZWQM2 outputs representing different cropping practices at the Iowa site. Inverse modeling provided reasonable fits to observed water and N fluxes and directly benefitted the modeling through: (i) simultaneous adjustment of multiple parameters versus one-at-a-time adjustment in manual approaches; (ii) clear indication by convergence criteria of when calibration is complete; (iii) straightforward detection of nonunique and insensitive parameters, which can affect the stability of PEST and RZWQM2; and (iv) generation of confidence intervals for uncertainty analysis of parameters and model predictions. Composite scaled sensitivities, which reflect the total information provided by the observations for a parameter, indicated that most of the RZWQM2 parameters at the California study site (CA) and Iowa study site (IA) could be reliably estimated by regression. Correlations obtained in the CA case indicated that all model parameters could be uniquely estimated by inverse modeling. Although water content at field capacity was highly correlated with bulk density (−0.94), the correlation is less than the threshold for nonuniqueness (0.95, absolute value basis). Additionally, we used truncated singular value decomposition (SVD) at CA to mitigate potential problems with highly correlated and insensitive parameters. Singular value decomposition estimates linear combinations (eigenvectors) of the original process-model parameters. Parameter confidence intervals (CIs) at CA indicated that parameters were reliably estimated with the possible exception of an organic pool transfer coefficient (R45), which had a comparatively wide CI. However, the 95% confidence interval for R45 (0.03–0.35) is mostly within the range of values reported for this parameter. Predictive analysis at CA generated confidence intervals that were compared with independently measured annual water flux (groundwater recharge) and median nitrate concentration in a collocated monitoring well as part of model evaluation. Both the observed recharge (42.3 cm yr−1) and nitrate concentration (24.3 mg L−1) were within their respective 90% confidence intervals, indicating that overall model error was within acceptable limits.

  4. Population genetics of Ceratitis capitata in South Africa: implications for dispersal and pest management.

    PubMed

    Karsten, Minette; van Vuuren, Bettine Jansen; Barnaud, Adeline; Terblanche, John S

    2013-01-01

    The invasive Mediterranean fruit fly (medfly), Ceratitis capitata, is one of the major agricultural and economical pests globally. Understanding invasion risk and mitigation of medfly in agricultural landscapes requires knowledge of its population structure and dispersal patterns. Here, estimates of dispersal ability are provided in medfly from South Africa at three spatial scales using molecular approaches. Individuals were genotyped at 11 polymorphic microsatellite loci and a subset of individuals were also sequenced for the mitochondrial cytochrome oxidase subunit I gene. Our results show that South African medfly populations are generally characterized by high levels of genetic diversity and limited population differentiation at all spatial scales. This suggests high levels of gene flow among sampling locations. However, natural dispersal in C. capitata has been shown to rarely exceed 10 km. Therefore, documented levels of high gene flow in the present study, even between distant populations (>1600 km), are likely the result of human-mediated dispersal or at least some form of long-distance jump dispersal. These findings may have broad applicability to other global fruit production areas and have significant implications for ongoing pest management practices, such as the sterile insect technique.

  5. Vertebrate Pest Control. Sale Publication 4077.

    ERIC Educational Resources Information Center

    Stimmann, M. W.; Clark, Dell O.

    This guide gives descriptions of common vertebrate pests and guidelines for using some common pesticides. The pests discussed are rats, mice, bats, moles, muskrats, ground squirrels, and gophers. Information is given for each pest on the type of damage the pest can do, the habitat and biology of the pest, and the most effective control methods.…

  6. 7 CFR 330.210a - Administrative instructions listing approved packing materials for plant pests.

    Code of Federal Regulations, 2010 CFR

    2010-01-01

    ... materials for plant pests. 330.210a Section 330.210a Agriculture Regulations of the Department of... PEST REGULATIONS; GENERAL; PLANT PESTS; SOIL, STONE, AND QUARRY PRODUCTS; GARBAGE Movement of Plant Pests § 330.210a Administrative instructions listing approved packing materials for plant pests. (a) The...

  7. Amplified Fragment Length Polymorphism Used to Investigate Genetic Variability of the Stable Fly (Diptera: Muscidae) Across North America

    USDA-ARS?s Scientific Manuscript database

    The stable fly, Stomoxys calcitrans (L), is a cosmopolitan pest of livestock and humans; its pestiferous nature and painful bite cause stress to cattle and other animals. The stress and resulting avoidance behaviors manifest as reductions in weight gain or milk production in cattle; estimated annual...

  8. 76 FR 37056 - Notice of Revision and Request for Extension of Approval of an Information Collection; Pale Cyst...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-06-24

    ... help prevent the artificial spread of pale cyst nematode, a major pest of potato crops in cool... Nematode'' because the title of the original subpart, ``Potato Cyst Nematode,'' was changed in a 2009 final...: U.S. potato producers, packers, processors, and handlers of potatoes. Estimated Annual Number of...

  9. Potential production of emerald ash borer adults: tree, site and landscape-level applications

    Treesearch

    Deborah G. McCullough; Nathan W. Siegert

    2007-01-01

    Emerald ash borer (Agrilus planipennis Fairmaire), an Asian phloem-feeding pest discovered in 2002, is established across southeast Michigan and parts of southern Ontario. More than 35 outlier populations have been identified in other areas of Michigan, Ohio and Indiana. An estimated 12 to 15 million ash (Fraxinus sp.) trees in...

  10. Pesticides on the inside: Exploiting the natural chemical defenses of maize against insect and microbial pests

    USDA-ARS?s Scientific Manuscript database

    Maize (Zea mays) is one of the most significant and abundantly grown crop plants in the United States with yields exceeding $50 billion annually. Despite major improvements in productivity, it is estimated that billions of bushels are lost per year due to the combined effects of herbivory and diseas...

  11. Minnesota Forest Resources in 2000.

    Treesearch

    David E. Haugen; Manfred E. Mielke

    2002-01-01

    Results of the 2000 annual inventory of Minnesota show over 16.5 million acres of forest land, over 17.6 billion cubic feet of all live volume on timberland, and an estimated 429 million dry tons of all live aboveground tree biomass on timberland. Known pests in Minnesota forests include the forest tent caterpillar, spruce budworm, large aspen tortrix, and introduced...

  12. Losing Chlordimeform Use in Cotton Production. Its Effects on the Economy and Pest Resistance. Agricultural Economic Report Number 587.

    ERIC Educational Resources Information Center

    Osteen, Craig; Suguiyama, Luis

    This report examines the economic implications of losing chlordimeform use on cotton and considers chlordimeform's role in managing the resistance of bollworms and tobacco budworms to synthetic pyrethroids. It estimates changes in prices, production, acreage, consumer expenditures, aggregate producer returns, regional crop effects, and returns to…

  13. COMPARISON OF FIELD MEASUREMENTS FROM A CHILDREN'S PESTICIDE STUDY AGAINST PREDICTIONS FROM A PHYSICALLY BASED PROBABILISTIC MODEL FOR ESTIMATING CHILDREN'S RESIDENTIAL EXPOSURE AND DOSE TO CHLORPYRIFOS

    EPA Science Inventory

    Semi-volatile pesticides, such as chlorpyrifos, can move about within a home environment after an application due to physical/chemical processes, resulting in concentration loadings in and on objects and surfaces. Children can be particularly susceptible to the effects of pest...

  14. Biological control of coffee berry borer: the role of DNA-based gut-content analysis in assessment of predation

    USDA-ARS?s Scientific Manuscript database

    The coffee berry borer, Hypothenemus hampei, is the most important pest of coffee worldwide, causing an estimated $500 million in damage annually. Infestation rates from 50-90% have been reported, significantly impacting coffee yields. Adult female H. hampei bore into the berry and lay eggs whose la...

  15. Complete mitochondrial genome of Bactrocera arecae (Insecta: Tephritidae) by next-generation sequencing and molecular phylogeny of Dacini tribe

    PubMed Central

    Yong, Hoi-Sen; Song, Sze-Looi; Lim, Phaik-Eem; Chan, Kok-Gan; Chow, Wan-Loo; Eamsobhana, Praphathip

    2015-01-01

    The whole mitochondrial genome of the pest fruit fly Bactrocera arecae was obtained from next-generation sequencing of genomic DNA. It had a total length of 15,900 bp, consisting of 13 protein-coding genes, 2 rRNA genes, 22 tRNA genes and a non-coding region (A + T-rich control region). The control region (952 bp) was flanked by rrnS and trnI genes. The start codons included 6 ATG, 3 ATT and 1 each of ATA, ATC, GTG and TCG. Eight TAA, two TAG, one incomplete TA and two incomplete T stop codons were represented in the protein-coding genes. The cloverleaf structure for trnS1 lacked the D-loop, and that of trnN and trnF lacked the TΨC-loop. Molecular phylogeny based on 13 protein-coding genes was concordant with 37 mitochondrial genes, with B. arecae having closest genetic affinity to B. tryoni. The subgenus Bactrocera of Dacini tribe and the Dacinae subfamily (Dacini and Ceratitidini tribes) were monophyletic. The whole mitogenome of B. arecae will serve as a useful dataset for studying the genetics, systematics and phylogenetic relationships of the many species of Bactrocera genus in particular, and tephritid fruit flies in general. PMID:26472633

  16. Is agriculture driving the diversification of the Bemisia tabaci species complex (Hemiptera: Sternorrhyncha: Aleyrodidae)?: Dating, diversification and biogeographic evidence revealed.

    PubMed

    Boykin, Laura M; Bell, Charles D; Evans, Gregory; Small, Ian; De Barro, Paul J

    2013-10-18

    Humans and insect herbivores are competing for the same food crops and have been for thousands of years. Despite considerable advances in crop pest management, losses due to insects remain considerable. The global homogenisation of agriculture has supported the range expansion of numerous insect pests and has been driven in part by human-assisted dispersal supported through rapid global trade and low-cost air passenger transport. One of these pests, is the whitefly, Bemisia tabaci, a cryptic species complex that contains some of the world's most damaging pests of agriculture. The complex shows considerable genetic diversity and strong phylogeographic relationships. One consequence of the considerable impact that members of the B. tabaci complex have on agriculture, is the view that human activity, particularly in relation to agricultural practices, such as use of insecticides, has driven the diversification found within the species complex. This has been particularly so in the case of two members of the complex, Middle East-Asia Minor 1 (MEAM1) and Mediterranean (MED), which have become globally distributed invasive species. An alternative hypothesis is that diversification is due to paleogeographic and paleoclimatological changes. The idea that human activity is driving speciation within the B. tabaci complex has never been tested, but the increased interest in fossil whiteflies and the growth in molecular data have enabled us to apply a relaxed molecular clock and so estimate divergence dates for the major lineages within the B. tabaci species complex. The divergence estimates do not support the view that human activity has been a major driver of diversification. Our analysis suggests that the major lineages within the complex arose approximately 60-30 mya and the highly invasive MED and MEAM1 split from the rest of the species complex around 12 mya well before the evolution of Homo sapiens and agriculture. Furthermore, the divergence dates coincide with a period of global diversification that occurred broadly across the plant and animal kingdoms and was most likely associated with major climatic and tectonic events.

  17. Three-dimensional holoscopic image coding scheme using high-efficiency video coding with kernel-based minimum mean-square-error estimation

    NASA Astrophysics Data System (ADS)

    Liu, Deyang; An, Ping; Ma, Ran; Yang, Chao; Shen, Liquan; Li, Kai

    2016-07-01

    Three-dimensional (3-D) holoscopic imaging, also known as integral imaging, light field imaging, or plenoptic imaging, can provide natural and fatigue-free 3-D visualization. However, a large amount of data is required to represent the 3-D holoscopic content. Therefore, efficient coding schemes for this particular type of image are needed. A 3-D holoscopic image coding scheme with kernel-based minimum mean square error (MMSE) estimation is proposed. In the proposed scheme, the coding block is predicted by an MMSE estimator under statistical modeling. In order to obtain the signal statistical behavior, kernel density estimation (KDE) is utilized to estimate the probability density function of the statistical modeling. As bandwidth estimation (BE) is a key issue in the KDE problem, we also propose a BE method based on kernel trick. The experimental results demonstrate that the proposed scheme can achieve a better rate-distortion performance and a better visual rendering quality.

  18. Dynamic complexities in a pest control model with birth pulse and harvesting

    NASA Astrophysics Data System (ADS)

    Goel, A.; Gakkhar, S.

    2016-04-01

    In this paper, an impulsive model is discussed for an integrated pest management approach comprising of chemical and mechanical controls. The pesticides and harvesting are used to control the stage-structured pest population. The mature pest give birth to immature pest in pulses at regular intervals. The pest is controlled by spraying chemical pesticides affecting immature as well as mature pest. The harvesting of both immature and mature pest further reduce the pest population. The discrete dynamical system obtained from stroboscopic map is analyzed. The threshold conditions for stability of pest-free state as well as non-trivial period-1 solution is obtained. The effect of pesticide spray timing and harvesting on immature as well as mature pest are shown. Finally, by numerical simulation with MATLAB, the dynamical behaviors of the model is found to be complex. Above the threshold level there is a characteristic sequence of bifurcations leading to chaotic dynamics. Route to chaos is found to be period-doubling. Period halving bifurcations are also observed.

  19. Self-reported prevalence of pests in Dutch households and the use of the health belief model to explore householders' intentions to engage in pest control.

    PubMed

    Lipman, Stefan A; Burt, Sara A

    2017-01-01

    Pests in the home are a health risk because they can be vectors for infectious disease, contribute to allergies and cause damage to buildings. The aims of this study were to record which categories of pests were reported in homes and to use a social cognition model, the health belief model, to investigate which psychological factors influence householders' intentions to control pests. An online questionnaire was completed by 413 respondents between 11 September and 31 November 2015. A large majority of respondents reported pests in or around their home within the previous year. The prevalences were: flying insects 98%, crawling insects 85%, rodents 62%, birds 58%, and moles 20%. Regression analysis for the health belief model revealed that perceiving greater benefits and fewer barriers to pest control and expecting severe consequences of zoonotic infections predicted higher intention to control pests. Intentions towards pest control were not influenced by perceiving oneself as susceptible to catching a disease from pests or health motivation (striving towards a healthy lifestyle). Intentions to engage in pest control were lower for households reporting bird prevalence. The findings suggest that interventions aimed at improving the effectiveness of domestic pest control should focus on increasing the benefits that individuals associate with effective pest control, lowering barriers, and on underlining the severity of the diseases that pests may carry.

  20. Connecting scales: achieving in-field pest control from areawide and landscape ecology studies.

    PubMed

    Schellhorn, Nancy A; Parry, Hazel R; Macfadyen, Sarina; Wang, Yongmo; Zalucki, Myron P

    2015-02-01

    Areawide management has a long history of achieving solutions that target pests, however, there has been little focus on the areawide management of arthropod natural enemies. Landscape ecology studies that show a positive relationship between natural enemy abundance and habitat diversity demonstrate landscape-dependent pest suppression, but have not yet clearly linked their findings to pest management or to the suite of pests associated with crops that require control. Instead the focus has often been on model systems of single pest species and their natural enemies. We suggest that management actions to capture pest control from natural enemies may be forth coming if: (i) the suite of response and predictor variables focus on pest complexes and specific management actions; (ii) the contribution of "the landscape" is identified by assessing the timing and numbers of natural enemies immigrating and emigrating to and from the target crop, as well as pests; and (iii) pest control thresholds aligned with crop development stages are the benchmark to measure impact of natural enemies on pests, in turn allowing for comparison between study regions, and generalizations. To achieve pest control we will need to incorporate what has been learned from an ecological understanding of model pest and natural enemy systems and integrate areawide landscape management with in-field pest management. © 2014 Institute of Zoology, Chinese Academy of Sciences.

  1. Self-reported prevalence of pests in Dutch households and the use of the health belief model to explore householders’ intentions to engage in pest control

    PubMed Central

    Lipman, Stefan A.

    2017-01-01

    Pests in the home are a health risk because they can be vectors for infectious disease, contribute to allergies and cause damage to buildings. The aims of this study were to record which categories of pests were reported in homes and to use a social cognition model, the health belief model, to investigate which psychological factors influence householders’ intentions to control pests. An online questionnaire was completed by 413 respondents between 11 September and 31 November 2015. A large majority of respondents reported pests in or around their home within the previous year. The prevalences were: flying insects 98%, crawling insects 85%, rodents 62%, birds 58%, and moles 20%. Regression analysis for the health belief model revealed that perceiving greater benefits and fewer barriers to pest control and expecting severe consequences of zoonotic infections predicted higher intention to control pests. Intentions towards pest control were not influenced by perceiving oneself as susceptible to catching a disease from pests or health motivation (striving towards a healthy lifestyle). Intentions to engage in pest control were lower for households reporting bird prevalence. The findings suggest that interventions aimed at improving the effectiveness of domestic pest control should focus on increasing the benefits that individuals associate with effective pest control, lowering barriers, and on underlining the severity of the diseases that pests may carry. PMID:29284047

  2. A Dynamical Analysis of a Piecewise Smooth Pest Control SI Model

    NASA Astrophysics Data System (ADS)

    Liu, Bing; Liu, Wanbo; Tao, Fennmei; Kang, Baolin; Cong, Jiguang

    In this paper, we propose a piecewise smooth SI pest control system to model the process of spraying pesticides and releasing infectious pests. We assume that the pest population consists of susceptible pests and infectious pests, and that the disease spreads horizontally between pests. We take the susceptible pest as the control index on whether to implement chemical control and biological control strategies. Based on the theory of Filippov system, the sliding-mode domain and conditions for the existence of real equilibria, virtual equilibria, pseudo-equilibrium and boundary equilibria are given. Further, we show the global stability of real equilibria (or boundary equilibria) and pseudo-equilibrium. Our results can provide theoretical guidance for the problem of pest control.

  3. Quality of recording of diabetes in the UK: how does the GP's method of coding clinical data affect incidence estimates? Cross-sectional study using the CPRD database

    PubMed Central

    Tate, A Rosemary; Dungey, Sheena; Glew, Simon; Beloff, Natalia; Williams, Rachael; Williams, Tim

    2017-01-01

    Objective To assess the effect of coding quality on estimates of the incidence of diabetes in the UK between 1995 and 2014. Design A cross-sectional analysis examining diabetes coding from 1995 to 2014 and how the choice of codes (diagnosis codes vs codes which suggest diagnosis) and quality of coding affect estimated incidence. Setting Routine primary care data from 684 practices contributing to the UK Clinical Practice Research Datalink (data contributed from Vision (INPS) practices). Main outcome measure Incidence rates of diabetes and how they are affected by (1) GP coding and (2) excluding ‘poor’ quality practices with at least 10% incident patients inaccurately coded between 2004 and 2014. Results Incidence rates and accuracy of coding varied widely between practices and the trends differed according to selected category of code. If diagnosis codes were used, the incidence of type 2 increased sharply until 2004 (when the UK Quality Outcomes Framework was introduced), and then flattened off, until 2009, after which they decreased. If non-diagnosis codes were included, the numbers continued to increase until 2012. Although coding quality improved over time, 15% of the 666 practices that contributed data between 2004 and 2014 were labelled ‘poor’ quality. When these practices were dropped from the analyses, the downward trend in the incidence of type 2 after 2009 became less marked and incidence rates were higher. Conclusions In contrast to some previous reports, diabetes incidence (based on diagnostic codes) appears not to have increased since 2004 in the UK. Choice of codes can make a significant difference to incidence estimates, as can quality of recording. Codes and data quality should be checked when assessing incidence rates using GP data. PMID:28122831

  4. Current and anticipated use of thermal-hydraulic codes for BWR transient and accident analyses in Japan

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Arai, Kenji; Ebata, Shigeo

    1997-07-01

    This paper summarizes the current and anticipated use of the thermal-hydraulic and neutronic codes for the BWR transient and accident analyses in Japan. The codes may be categorized into the licensing codes and the best estimate codes for the BWR transient and accident analyses. Most of the licensing codes have been originally developed by General Electric. Some codes have been updated based on the technical knowledge obtained in the thermal hydraulic study in Japan, and according to the BWR design changes. The best estimates codes have been used to support the licensing calculations and to obtain the phenomenological understanding ofmore » the thermal hydraulic phenomena during a BWR transient or accident. The best estimate codes can be also applied to a design study for a next generation BWR to which the current licensing model may not be directly applied. In order to rationalize the margin included in the current BWR design and develop a next generation reactor with appropriate design margin, it will be required to improve the accuracy of the thermal-hydraulic and neutronic model. In addition, regarding the current best estimate codes, the improvement in the user interface and the numerics will be needed.« less

  5. 7 CFR 330.203 - Action on applications for permits to move plant pests; form of and conditions in permits.

    Code of Federal Regulations, 2010 CFR

    2010-01-01

    ... 7 Agriculture 5 2010-01-01 2010-01-01 false Action on applications for permits to move plant pests... PEST REGULATIONS; GENERAL; PLANT PESTS; SOIL, STONE, AND QUARRY PRODUCTS; GARBAGE Movement of Plant Pests § 330.203 Action on applications for permits to move plant pests; form of and conditions in...

  6. A theoretical approach on controlling agricultural pest by biological controls.

    PubMed

    Mondal, Prasanta Kumar; Jana, Soovoojeet; Kar, T K

    2014-03-01

    In this paper we propose and analyze a prey-predator type dynamical system for pest control where prey population is treated as the pest. We consider two classes for the pest namely susceptible pest and infected pest and the predator population is the natural enemy of the pest. We also consider average delay for both the predation rate i.e. predation to the susceptible pest and infected pest. Considering a subsystem of original system in the absence of infection, we analyze the existence of all possible non-negative equilibria and their stability criteria for both the subsystem as well as the original system. We present the conditions for transcritical bifurcation and Hopf bifurcation in the disease free system. The theoretical evaluations are demonstrated through numerical simulations.

  7. Tissue-specific Proteogenomic Analysis of Plutella xylostella Larval Midgut Using a Multialgorithm Pipeline*

    PubMed Central

    Zhu, Xun; Xie, Shangbo; Armengaud, Jean; Xie, Wen; Guo, Zhaojiang; Kang, Shi; Wu, Qingjun; Wang, Shaoli; Xia, Jixing; He, Rongjun; Zhang, Youjun

    2016-01-01

    The diamondback moth, Plutella xylostella (L.), is the major cosmopolitan pest of brassica and other cruciferous crops. Its larval midgut is a dynamic tissue that interfaces with a wide variety of toxicological and physiological processes. The draft sequence of the P. xylostella genome was recently released, but its annotation remains challenging because of the low sequence coverage of this branch of life and the poor description of exon/intron splicing rules for these insects. Peptide sequencing by computational assignment of tandem mass spectra to genome sequence information provides an experimental independent approach for confirming or refuting protein predictions, a concept that has been termed proteogenomics. In this study, we carried out an in-depth proteogenomic analysis to complement genome annotation of P. xylostella larval midgut based on shotgun HPLC-ESI-MS/MS data by means of a multialgorithm pipeline. A total of 876,341 tandem mass spectra were searched against the predicted P. xylostella protein sequences and a whole-genome six-frame translation database. Based on a data set comprising 2694 novel genome search specific peptides, we discovered 439 novel protein-coding genes and corrected 128 existing gene models. To get the most accurate data to seed further insect genome annotation, more than half of the novel protein-coding genes, i.e. 235 over 439, were further validated after RT-PCR amplification and sequencing of the corresponding transcripts. Furthermore, we validated 53 novel alternative splicings. Finally, a total of 6764 proteins were identified, resulting in one of the most comprehensive proteogenomic study of a nonmodel animal. As the first tissue-specific proteogenomics analysis of P. xylostella, this study provides the fundamental basis for high-throughput proteomics and functional genomics approaches aimed at deciphering the molecular mechanisms of resistance and controlling this pest. PMID:26902207

  8. Benchmarking variable-density flow in saturated and unsaturated porous media

    NASA Astrophysics Data System (ADS)

    Guevara Morel, Carlos Roberto; Cremer, Clemens; Graf, Thomas

    2015-04-01

    In natural environments, fluid density and viscosity can be affected by spatial and temporal variations of solute concentration and/or temperature. These variations can occur, for example, due to salt water intrusion in coastal aquifers, leachate infiltration from waste disposal sites and upconing of saline water from deep aquifers. As a consequence, potentially unstable situations may exist in which a dense fluid overlies a less dense fluid. This situation can produce instabilities that manifest as dense plume fingers that move vertically downwards counterbalanced by vertical upwards flow of the less dense fluid. Resulting free convection increases solute transport rates over large distances and times relative to constant-density flow. Therefore, the understanding of free convection is relevant for the protection of freshwater aquifer systems. The results from a laboratory experiment of saturated and unsaturated variable-density flow and solute transport (Simmons et al., Transp. Porous Medium, 2002) are used as the physical basis to define a mathematical benchmark. The HydroGeoSphere code coupled with PEST are used to estimate the optimal parameter set capable of reproducing the physical model. A grid convergency analysis (in space and time) is also undertaken in order to obtain the adequate spatial and temporal discretizations. The new mathematical benchmark is useful for model comparison and testing of variable-density variably saturated flow in porous media.

  9. Evaluation of three neonicotinoid insecticides against the common pistachio psylla, Agonoscena pistaciae , and its natural enemies

    PubMed Central

    Amirzade, Najmeh; Izadi, Hamzeh; Jalali, Mohammad Amin; Zohdi, Hadi

    2014-01-01

    Abstract The common pistachio psylla, Agonoscena pistaciae Burckhardt and Lauterer (Hemiptera: Psyllidae), is a key pest in pistachio orchards in Iran. Chemical control is a common method to manage this pest. Compatibility between natural enemies and pesticides is a primary concern in programs of integrated pest management of the psyllid pest. In this research, susceptibility of fifth instar nymphs of Ag. pistaciae and fourth instar larvae of the two most common predators of this pest, Adalia bipunctata L. (Coleoptera: Coccinellidae) and Coccinella undecimpunctata aegyptiaca Reiche, to acetamiprid, thiamethoxam, and imidacloprid was investigated. Probit analysis of concentration-mortality data was conducted to estimate the LC50 value. The results showed that thiamethoxam with an LC50 value of 56.35 mg a.i./L was more toxic to fifth instar nymphs of Ag. pistaciae in comparison to acetamiprid (60.75 mg a.i/L) and imidacloprid (138.21 mg a.i/L) . Imidacloprid with an LC50 value of 218.89 mg a.i/L compared to acetamiprid (222.65 mg a.i/L) and thiamethoxam (232.37 mg a.i/L) had more lethal effects on fourth instar larvae of Ad. bipunctata. However, on the fourth instar larvae of C. undecimpunctata aegyptica , acetamiprid with an LC50 value of 263.44 mg a.i/L was more toxic than thiamethoxam (296.62 mg a.i/L) and imidacloprid (447.82 mg a.i/L). The laboratory findings showed that the three tested insecticides were more toxic to the common pistachio psylla than to its natural predators. Thiamethoxam was the most toxic against Ag. pistaciae . However, its toxicity to the predators was lower than imidacloprid and acetamiprid. This result suggests that thiamethoxam is the best insecticide for control of Ag. pistaciae in combination with predatory lady beetles. PMID:25373182

  10. Risk assessment and spread of the potentially invasive Ceratitis rosa Karsch and Ceratitis quilicii De Meyer, Mwatawala & Virgilio sp. Nov. using life-cycle simulation models: Implications for phytosanitary measures and management

    PubMed Central

    Tanga, Chrysantus Mbi; Khamis, Fathiya Mbarak; Tonnang, Henri E. Z.; Rwomushana, Ivan; Mosomtai, Gladys; Mohamed, Samira A.; Ekesi, Sunday

    2018-01-01

    Integrative taxonomy has resolved the species status of the potentially invasive Ceratitis rosa Karsch into two separate species with distinct ecological requirements: C. rosa “lowland type” and the newly described species Ceratitis quilicii De Meyer, Mwatawala & Virgilio sp. nov. “highland type”. Both species are tephritid pests threatening the production of horticultural crops in Africa and beyond. Studies were carried out by constructing thermal reaction norms for each life stage of both species at constant and fluctuating temperatures. Non-linear functions were fitted to continuously model species development, mortality, longevity and oviposition to establish phenology models that were stochastically simulated to estimate the life table parameters of each species. For spatial analysis of pest risk, three generic risk indices were visualized using the advanced Insect Life Cycle Modeling software. The study revealed that the highest fecundity, intrinsic rate of natural increase and net reproductive rate for C. rosa and C. quilicii was at 25 and 30°C, respectively. The resulting model successfully fits the known distribution of C. rosa and C. quilicii in Africa and the two Indian Ocean islands of La Réunion and Mauritius. Globally, the model highlights the substantial invasion risk posed by C. rosa and C. quilicii to cropping regions in the Americas, Australia, India, China, Southeast Asia, Europe, and West and Central Africa. However, the proportion of the regions predicted to be climatically suitable for both pests is narrower for C. rosa in comparison with C. quilicii, suggesting that C. quilicii will be more tolerant to a wider range of climatic conditions than C. rosa. This implies that these pests are of significant concern to biosecurity agencies in the uninvaded regions. Therefore, these findings provide important information to enhance monitoring/surveillance and designing pest management strategies to limit the spread and reduce their impact in the invaded range. PMID:29304084

  11. Dynamic complexities in a pest control model with birth pulse and harvesting

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Goel, A., E-mail: goelanju23@gmail.com; Gakkhar, S., E-mail: sungkfma@iitr.ernet.in

    In this paper, an impulsive model is discussed for an integrated pest management approach comprising of chemical and mechanical controls. The pesticides and harvesting are used to control the stage-structured pest population. The mature pest give birth to immature pest in pulses at regular intervals. The pest is controlled by spraying chemical pesticides affecting immature as well as mature pest. The harvesting of both immature and mature pest further reduce the pest population. The discrete dynamical system obtained from stroboscopic map is analyzed. The threshold conditions for stability of pest-free state as well as non-trivial period-1 solution is obtained. Themore » effect of pesticide spray timing and harvesting on immature as well as mature pest are shown. Finally, by numerical simulation with MATLAB, the dynamical behaviors of the model is found to be complex. Above the threshold level there is a characteristic sequence of bifurcations leading to chaotic dynamics. Route to chaos is found to be period-doubling. Period halving bifurcations are also observed.« less

  12. Sex-pairing pheromone in the Asian termite pest species Odontotermes formosanus.

    PubMed

    Wen, Ping; Ji, Bao-Zhong; Liu, Shu-Wen; Liu, Cong; Sillam-Dussès, David

    2012-05-01

    The sex-pairing pheromone of the black winged subterranean termite, Odontotermes formosanus (Shiraki) (Isoptera, Termitidae), was investigated using headspace-SPME, GC-MS, GC-EAD, and attraction bioassays. Females secrete the pheromone from their sternal gland to attract males. The sex-pairing pheromone is composed of (Z,Z)-dodeca-3,6-dien-1-ol and (Z)-dodec-3-en-1-ol, estimated at 9 to 16.64 ng and 0.2 to 0.54 ng, respectively. Both short- and long-distance sex attraction bioassays were employed to show that these compounds act in synergy at long distance, but only (Z,Z)-dodeca-3,6-dien-1-ol is active at short distance. The pheromone may be useful in efforts to control this pest, which is considered one of the most harmful termite species in Southeast Asia.

  13. Population Dynamics and Flight Phenology Model of Codling Moth Differ between Commercial and Abandoned Apple Orchard Ecosystems.

    PubMed

    Joshi, Neelendra K; Rajotte, Edwin G; Naithani, Kusum J; Krawczyk, Greg; Hull, Larry A

    2016-01-01

    Apple orchard management practices may affect development and phenology of arthropod pests, such as the codling moth (CM), Cydia pomonella (L.) (Lepidoptera: Tortricidae), which is a serious internal fruit-feeding pest of apples worldwide. Estimating population dynamics and accurately predicting the timing of CM development and phenology events (for instance, adult flight, and egg-hatch) allows growers to understand and control local populations of CM. Studies were conducted to compare the CM flight phenology in commercial and abandoned apple orchard ecosystems using a logistic function model based on degree-days accumulation. The flight models for these orchards were derived from the cumulative percent moth capture using two types of commercially available CM lure baited traps. Models from both types of orchards were also compared to another model known as PETE (prediction extension timing estimator) that was developed in 1970s to predict life cycle events for many fruit pests including CM across different fruit growing regions of the United States. We found that the flight phenology of CM was significantly different in commercial and abandoned orchards. CM male flight patterns for first and second generations as predicted by the constrained and unconstrained PCM (Pennsylvania Codling Moth) models in commercial and abandoned orchards were different than the flight patterns predicted by the currently used CM model (i.e., PETE model). In commercial orchards, during the first and second generations, the PCM unconstrained model predicted delays in moth emergence compared to current model. In addition, the flight patterns of females were different between commercial and abandoned orchards. Such differences in CM flight phenology between commercial and abandoned orchard ecosystems suggest potential impact of orchard environment and crop management practices on CM biology.

  14. Population Dynamics and Flight Phenology Model of Codling Moth Differ between Commercial and Abandoned Apple Orchard Ecosystems

    PubMed Central

    Joshi, Neelendra K.; Rajotte, Edwin G.; Naithani, Kusum J.; Krawczyk, Greg; Hull, Larry A.

    2016-01-01

    Apple orchard management practices may affect development and phenology of arthropod pests, such as the codling moth (CM), Cydia pomonella (L.) (Lepidoptera: Tortricidae), which is a serious internal fruit-feeding pest of apples worldwide. Estimating population dynamics and accurately predicting the timing of CM development and phenology events (for instance, adult flight, and egg-hatch) allows growers to understand and control local populations of CM. Studies were conducted to compare the CM flight phenology in commercial and abandoned apple orchard ecosystems using a logistic function model based on degree-days accumulation. The flight models for these orchards were derived from the cumulative percent moth capture using two types of commercially available CM lure baited traps. Models from both types of orchards were also compared to another model known as PETE (prediction extension timing estimator) that was developed in 1970s to predict life cycle events for many fruit pests including CM across different fruit growing regions of the United States. We found that the flight phenology of CM was significantly different in commercial and abandoned orchards. CM male flight patterns for first and second generations as predicted by the constrained and unconstrained PCM (Pennsylvania Codling Moth) models in commercial and abandoned orchards were different than the flight patterns predicted by the currently used CM model (i.e., PETE model). In commercial orchards, during the first and second generations, the PCM unconstrained model predicted delays in moth emergence compared to current model. In addition, the flight patterns of females were different between commercial and abandoned orchards. Such differences in CM flight phenology between commercial and abandoned orchard ecosystems suggest potential impact of orchard environment and crop management practices on CM biology. PMID:27713702

  15. Numerical and functional responses of forest bats to a major insect pest in pine plantations.

    PubMed

    Charbonnier, Yohan; Barbaro, Luc; Theillout, Amandine; Jactel, Hervé

    2014-01-01

    Global change is expected to modify the frequency and magnitude of defoliating insect outbreaks in forest ecosystems. Bats are increasingly acknowledged as effective biocontrol agents for pest insect populations. However, a better understanding is required of whether and how bat communities contribute to the resilience of forests to man- and climate-driven biotic disturbances.We studied the responses of forest insectivorous bats to a major pine defoliator, the pine processionary moth Thaumetopoea pityocampa, which is currently expanding its range in response to global warming [corrected]. We used pheromone traps and ultrasound bat recorders to estimate the abundance and activity of moths and predatory bats along the edge of infested pine stands. We used synthetic pheromone to evaluate the effects of experimentally increased moth availability on bat foraging activity. We also evaluated the top-down regulation of moth population by estimating T. pityocampa larval colonies abundance on the same edges the following winter. We observed a close spatio-temporal matching between emergent moths and foraging bats, with bat activity significantly increasing with moth abundance. The foraging activity of some bat species was significantly higher near pheromone lures, i.e. in areas of expected increased prey availability. Furthermore moth reproductive success significantly decreased with increasing bat activity during the flight period of adult moths. These findings suggest that bats, at least in condition of low prey density, exhibit numerical and functional responses to a specific and abundant prey, which may ultimately result in an effective top-down regulation of the population of the prey. These observations are consistent with bats being useful agents for the biocontrol of insect pest populations in plantation forests.

  16. Thermal biology, population fluctuations and implications of temperature extremes for the management of two globally significant insect pests.

    PubMed

    Nyamukondiwa, Casper; Weldon, Christopher W; Chown, Steven L; le Roux, Peter C; Terblanche, John S

    2013-12-01

    The link between environmental temperature, physiological processes and population fluctuations is a significant aspect of insect pest management. Here, we explore how thermal biology affects the population abundance of two globally significant pest fruit fly species, Ceratitis capitata (medfly) and C. rosa (Natal fruit fly), including irradiated individuals and those expressing a temperature sensitive lethal (tsl) mutation that are used in the sterile insect technique. Results show that upper and lower lethal temperatures are seldom encountered at the field sites, while critical minimum temperatures for activity and lower developmental thresholds are crossed more frequently. Estimates of abundance revealed that C. capitata are active year-round, but abundance declines markedly during winter. Temporal autocorrelation of average fortnightly trap captures and of development time, estimated from an integrated model to calculate available degree days, show similar seasonal lags suggesting that population increases in early spring occur after sufficient degree-days have accumulated. By contrast, population collapses coincide tightly with increasing frequency of low temperature events that fall below critical minimum temperatures for activity. Individuals of C. capitata expressing the tsl mutation show greater critical thermal maxima and greater longevity under field conditions than reference individuals. Taken together, this evidence suggests that low temperatures limit populations in the Western Cape, South Africa and likely do so elsewhere. Increasing temperature extremes and warming climates generally may extend the season over which these species are active, and could increase abundance. The sterile insect technique may prove profitable as climates change given that laboratory-reared tsl flies have an advantage under warmer conditions. Copyright © 2013 Elsevier Ltd. All rights reserved.

  17. Inheritance and fitness costs of Spodoptera frugiperda (Lepidoptera: Noctuidae) resistance to spinosad in Brazil.

    PubMed

    Okuma, Daniela M; Bernardi, Daniel; Horikoshi, Renato J; Bernardi, Oderlei; Silva, Aline P; Omoto, Celso

    2018-06-01

    Spodoptera frugiperda is a pest of economically important crops in South America. In Brazil, this species is considered the most destructive pest of maize. Use of spinosyn insecticides in insect resistance management (IRM) has been one strategy to control this pest. In this study, we selected a strain of S. frugiperda resistant to spinosad and evaluated the inheritance and fitness costs of the resistance. Estimated LC 50 (concentration required to kill 50% of larvae) values were 0.011 and 9.80 µg cm -2 for the spinosad-susceptible (Sus) and -resistant (Spin-res) strains, respectively. This represents an 890-fold resistance ratio. LC 50 values for reciprocal crosses were 0.18 and 0.14 µg cm -2 , indicating that resistance to spinosad is an autosomal incompletely recessive trait. Backcrosses of the F 1 progeny from reciprocal crosses with the parental Spin-res strain showed a polygenic effect. The estimated minimum number of independent segregations was ∼ 2.45, indicating that resistance to spinosad is associated with multiple genes. In greenhouse assays, third-instar larvae from the Spin-res strain showed >92% survival on spinosad-treated maize. By contrast Sus and reciprocal crosses exhibited 0% and <5% survival, respectively, indicating that resistance is recessive. Life history studies to investigate the fitness cost of resistance revealed a 41% reduction in the rate of survival to adulthood and a 49% lower reproductive rate in the Spin-res strain compared with the Sus strain. The autosomal, incompletely recessive and polygenic resistance to spinosad in S. frugiperda and the fitness costs associated with this resistance can be exploited in IRM strategies to preserve the lifetime of spinosad for control of S. frugiperda in Brazil. © 2017 Society of Chemical Industry. © 2017 Society of Chemical Industry.

  18. Household use of insecticide consumer products in a dengue-endemic area in México.

    PubMed

    Loroño-Pino, María Alba; Chan-Dzul, Yamili N; Zapata-Gil, Rocio; Carrillo-Solís, Claudia; Uitz-Mena, Ana; García-Rejón, Julián E; Keefe, Thomas J; Beaty, Barry J; Eisen, Lars

    2014-10-01

    To evaluate the household use of insecticide consumer products to kill mosquitoes and other insect pests, as well as the expenditures for using these products, in a dengue-endemic area of México. A questionnaire was administered to 441 households in Mérida City and other communities in Yucatán to assess household use of insecticide consumer products. A total of 86.6% of surveyed households took action to kill insect pests with consumer products. The most commonly used product types were insecticide aerosol spray cans (73.6%), electric plug-in insecticide emitters (37.4%) and mosquito coils (28.3%). Mosquitoes were targeted by 89.7% of households using insecticide aerosol spray cans and >99% of households using electric plug-in insecticide emitters or mosquito coils. Products were used daily or every 2 days in most of the households for insecticide aerosol spray cans (61.4%), electric plug-in insecticide emitters (76.2%) and mosquito coils (82.1%). For all products used to kill insect pests, the median annual estimated expenditure per household that took action was 408 Mexican pesos ($MXN), which corresponded to approximately 31 $US. These numbers are suggestive of an annual market in excess of 75 million $MXN (>5.7 million $US) for Mérida City alone. Mosquitoes threaten human health and are major nuisances in homes in the study area in México. Households were found to have taken vigorous action to kill mosquitoes and other insect pests and spent substantial amounts of money on insecticide consumer products. © 2014 John Wiley & Sons Ltd.

  19. Early pest detection in soy plantations from hyperspectral measurements: a case study for caterpillar detection

    NASA Astrophysics Data System (ADS)

    Tailanián, Matías; Castiglioni, Enrique; Musé, Pablo; Fernández Flores, Germán.; Lema, Gabriel; Mastrángelo, Pedro; Almansa, Mónica; Fernández Liñares, Ignacio; Fernández Liñares, Germán.

    2015-10-01

    Soybean producers suffer from caterpillar damage in many areas of the world. Estimated average economic losses are annually 500 million USD in Brazil, Argentina, Paraguay and Uruguay. Designing efficient pest control management using selective and targeted pesticide applications is extremely important both from economic and environmental perspectives. With that in mind, we conducted a research program during the 2013-2014 and 2014-2015 planting seasons in a 4,000 ha soybean farm, seeking to achieve early pest detection. Nowadays pest presence is evaluated using manual, labor-intensive counting methods based on sampling strategies which are time consuming and imprecise. The experiment was conducted as follows. Using manual counting methods as ground-truth, a spectrometer capturing reflectance from 400 to 1100 nm was used to measure the reflectance of soy plants. A first conclusion, resulting from measuring the spectral response at leaves level, showed that stress was a property of plants since different leaves with different levels of damage yielded the same spectral response. Then, to assess the applicability of unsupervised classification of plants as healthy, biotic-stressed or abiotic-stressed, feature extraction and selection from leaves spectral signatures, combined with a Supported Vector Machine classifier was designed. Optimization of SVM parameters using grid search with cross-validation, along with classification evaluation by ten-folds cross-validation showed a correct classification rate of 95%, consistently on both seasons. Controlled experiments using cages with different numbers of caterpillars--including caterpillar-free plants--were also conducted to evaluate consistency in trends of the spectral response as well as the extracted features.

  20. Market forces and technological substitutes cause fluctuations in the value of bat pest-control services for cotton.

    PubMed

    López-Hoffman, Laura; Wiederholt, Ruscena; Sansone, Chris; Bagstad, Kenneth J; Cryan, Paul; Diffendorfer, Jay E; Goldstein, Joshua; Lasharr, Kelsie; Loomis, John; McCracken, Gary; Medellín, Rodrigo A; Russell, Amy; Semmens, Darius

    2014-01-01

    Critics of the market-based, ecosystem services approach to biodiversity conservation worry that volatile market conditions and technological substitutes will diminish the value of ecosystem services and obviate the "economic benefits" arguments for conservation. To explore the effects of market forces and substitutes on service values, we assessed how the value of the pest-control services provided by Mexican free-tailed bats (Tadarida brasiliensis mexicana) to cotton production in the southwestern U.S. has changed over time. We calculated service values each year from 1990 through 2008 by estimating the value of avoided crop damage and the reduced social and private costs of insecticide use in the presence of bats. Over this period, the ecosystem service value declined by 79% ($19.09 million U.S. dollars) due to the introduction and widespread adoption of Bt (Bacillus thuringiensis) cotton transgenically modified to express its own pesticide, falling global cotton prices and the reduction in the number of hectares in the U.S. planted with cotton. Our results demonstrate that fluctuations in market conditions can cause temporal variation in ecosystem service values even when ecosystem function--in this case bat population numbers--is held constant. Evidence is accumulating, however, of the evolution of pest resistance to Bt cotton, suggesting that the value of bat pest-control services may increase again. This gives rise to an economic option value argument for conserving Mexican free-tailed bat populations. We anticipate that these results will spur discussion about the role of ecosystem services in biodiversity conservation in general, and bat conservation in particular.

  1. Market forces and technological substitutes cause fluctuations in the value of bat pest-control services for cotton

    USGS Publications Warehouse

    López-Hoffman, Laura; Wiederholt, Ruscena; Sansone, Chris; Bagstad, Kenneth J.; Cryan, Paul M.; Diffendorfer, James E.; Goldstein, Joshua; LaSharr, Kelsie; Loomis, John; McCracken, Gary; Medellin, Rodrigo A.; Russell, Amy; Semmens, Darius J.

    2014-01-01

    Critics of the market-based, ecosystem services approach to biodiversity conservation worry that volatile market conditions and technological substitutes will diminish the value of ecosystem services and obviate the “economic benefits” arguments for conservation. To explore the effects of market forces and substitutes on service values, we assessed how the value of the pest-control services provided by Mexican free-tailed bats (Tadarida brasiliensis mexicana) to cotton production in the southwestern U.S. has changed over time. We calculated service values each year from 1990 through 2008 by estimating the value of avoided crop damage and the reduced social and private costs of insecticide use in the presence of bats. Over this period, the ecosystem service value declined by 79% ($19.09 million U.S. dollars) due to the introduction and widespread adoption of Bt (Bacillus thuringiensis) cotton transgenically modified to express its own pesticide, falling global cotton prices and the reduction in the number of hectares in the U.S. planted with cotton. Our results demonstrate that fluctuations in market conditions can cause temporal variation in ecosystem service values even when ecosystem function – in this case bat population numbers – is held constant. Evidence is accumulating, however, of the evolution of pest resistance to Bt cotton, suggesting that the value of bat pest-control services may increase again. This gives rise to an economic option value argument for conserving Mexican free-tailed bat populations. We anticipate that these results will spur discussion about the role of ecosystem services in biodiversity conservation in general, and bat conservation in particular.

  2. A new multicriteria risk mapping approach based on a multiattribute frontier concept.

    PubMed

    Yemshanov, Denys; Koch, Frank H; Ben-Haim, Yakov; Downing, Marla; Sapio, Frank; Siltanen, Marty

    2013-09-01

    Invasive species risk maps provide broad guidance on where to allocate resources for pest monitoring and regulation, but they often present individual risk components (such as climatic suitability, host abundance, or introduction potential) as independent entities. These independent risk components are integrated using various multicriteria analysis techniques that typically require prior knowledge of the risk components' importance. Such information is often nonexistent for many invasive pests. This study proposes a new approach for building integrated risk maps using the principle of a multiattribute efficient frontier and analyzing the partial order of elements of a risk map as distributed in multidimensional criteria space. The integrated risks are estimated as subsequent multiattribute frontiers in dimensions of individual risk criteria. We demonstrate the approach with the example of Agrilus biguttatus Fabricius, a high-risk pest that may threaten North American oak forests in the near future. Drawing on U.S. and Canadian data, we compare the performance of the multiattribute ranking against a multicriteria linear weighted averaging technique in the presence of uncertainties, using the concept of robustness from info-gap decision theory. The results show major geographic hotspots where the consideration of tradeoffs between multiple risk components changes integrated risk rankings. Both methods delineate similar geographical regions of high and low risks. Overall, aggregation based on a delineation of multiattribute efficient frontiers can be a useful tool to prioritize risks for anticipated invasive pests, which usually have an extremely poor prior knowledge base. Published 2013. This article is a U.S. Government work and is in the public domain in the USA.

  3. The effect of indoxacarb and five other insecticides on Phytoseiulus persimilis (Acari: Phytoseiidae), Amblyseius fallacis (Acari: Phytoseiidae) and nymphs of Orius insidiosus (Hemiptera: Anthocoridae).

    PubMed

    Bostanian, Noubar J; Akalach, Mohammed

    2006-04-01

    A laboratory study assessed the contact toxicity of indoxacarb, abamectin, endosulfan, insecticidal soap, S-kinoprene and dimethoate to Amblyseius fallacis (Garman), Phytoseiulus persimilis Athias-Henriot and nymphs of Orius insidiosus (Say). Amblyseius fallacis is a predacious phytoseiid mite and an integral part of integrated pest management (IPM) programmes in North American apple orchards. The other two beneficials are widely used in greenhouses to manage various arthropod pests infesting vegetable and ornamental crops. Indoxacarb is a slow-acting insecticide, so toxicity data were recorded 7 days post-treatment when the data had stabilised. It showed no toxicity to O. insidiosus nymphs or to A. fallacis or P. persimilis adults. The LC50 values for O. insidiosus nymphs and P. persimilis could not be estimated with their associated confidence limits, because the g values were greater than 0.5 and under such circumstances the lethal concentration would lie outside the limits. The LC50 for A. fallacis was 7.6x the label rate. The fecundity of P. persimilis was reduced by 26.7%. The eclosion of treated eggs from both species of beneficial mites was not affected adversely. Among the other pest control products, S-kinoprene and endosulfan affected adversely at least one species of the predators, whereas dimethoate, abamectin and insecticidal soap were very toxic to all three beneficials. Indoxacarb should be evaluated as a pest control product in IPM programmes. Copyright (c) 2006 Crown in the right of Canada.

  4. Economic and physical determinants of the global distributions of crop pests and pathogens

    PubMed Central

    Bebber, Daniel P; Holmes, Timothy; Smith, David; Gurr, Sarah J

    2014-01-01

    Crop pests and pathogens pose a significant and growing threat to food security, but their geographical distributions are poorly understood. We present a global analysis of pest and pathogen distributions, to determine the roles of socioeconomic and biophysical factors in determining pest diversity, controlling for variation in observational capacity among countries. Known distributions of 1901 pests and pathogens were obtained from CABI. Linear models were used to partition the variation in pest species per country amongst predictors. Reported pest numbers increased with per capita gross domestic product (GDP), research expenditure and research capacity, and the influence of economics was greater in micro-organisms than in arthropods. Total crop production and crop diversity were the strongest physical predictors of pest numbers per country, but trade and tourism were insignificant once other factors were controlled. Islands reported more pests than mainland countries, but no latitudinal gradient in species richness was evident. Country wealth is likely to be a strong indicator of observational capacity, not just trade flow, as has been interpreted in invasive species studies. If every country had US levels of per capita GDP, then 205 ± 9 additional pests per country would be reported, suggesting that enhanced investment in pest observations will reveal the hidden threat of crop pests and pathogens. PMID:24517626

  5. Development of a method using multispectral imagery and spatial pattern metrics to quantify stress to wheat fields caused by Diuraphis noxia

    USDA-ARS?s Scientific Manuscript database

    The Russian wheat aphid, Diuraphis noxia, is an important pest of winter wheat, Triticum aestivum, and barley, Hordeum vulgare that has caused an annual economic loss estimated at over 1 billion dollars since it first appeared in the United States. The objective of this study was to determine the p...

  6. Utilization options for decadent eastern hemlock timber

    Treesearch

    Matthew F. Winn; Philip A. Araman

    2007-01-01

    The hemlock woolly adelgid (Adelges tsugae Annand) is a non-native pest that is decimating the eastern hemlock (Tsuga canadensis L.) population in the forests of the eastern United States. Nearly one third of the area inhabited by native hemlocks in the Central Hardwoods region is infested with the insect. Once a tree is heavily infected, it is estimated that tree...

  7. Estimating heritability of disease resistance and factors that contribute to long-term survival in butternut (Juglans cinerea L.)

    Treesearch

    Nicholas R. LaBonte; Michael E. Ostry; Amy Ross-Davis; Keith E. Woeste

    2015-01-01

    For most wild species affected by exotic pests or pathogens, the relative importance of heritable genetic differences in determining apparent variation in disease resistance is unknown. This is true in particular for butternut, a North American hardwood affected by butternut canker disease and undergoing demographic contraction. Little is known about site effects on...

  8. Agrilus auroguttatus exit hole distributions on Quercus agrifolia boles and a sampling method to estimate their density on individual trees

    Treesearch

    Laurel J. Haavik; Tom W. Coleman; Mary Louise Flint; Robert C. Venette; Steven J. Seybold

    2012-01-01

    In recent decades, invasive phloem and wood borers have become important pests in North America. To aid tree sampling and survey efforts for the newly introduced goldspotted oak borer, Agrilus auroguttatus Schaeffer (Coleoptera: Buprestidae), we examined spatial patterns of exit holes on the boles (trunks) of 58 coast live oak, Quercus...

  9. Estimation of median lethal concentration of three isolates of Beauveria bassiana for control of Megacopta cribraria (Heteroptera: Plataspidae) bioassayed on solid Lugys Spp. Diet²

    USDA-ARS?s Scientific Manuscript database

    The entomopathogenic fungus Beauveria bassiana is a potential candidate for biological control of a variety of pests. The objectives of this study were isolate and identify the fungus from Kudzu bugs and determine its infectivity comparing with two highly pathogenic isolates including the Mississipp...

  10. Optimizing simulated fertilizer additions using a genetic algorithm with a nutrient uptake model

    Treesearch

    Wendell P. Cropper; N.B. Comerford

    2005-01-01

    Intensive management of pine plantations in the southeastern coastal plain typically involves weed and pest control, and the addition of fertilizer to meet the high nutrient demand of rapidly growing pines. In this study we coupled a mechanistic nutrient uptake model (SSAND, soil supply and nutrient demand) with a genetic algorithm (GA) in order to estimate the minimum...

  11. Inferring modes of colonization for pest species using heterozygosity comparisons and a shared-allele test.

    PubMed

    Sved, J A; Yu, H; Dominiak, B; Gilchrist, A S

    2003-02-01

    Long-range dispersal of a species may involve either a single long-distance movement from a core population or spreading via unobserved intermediate populations. Where the new populations originate as small propagules, genetic drift may be extreme and gene frequency or assignment methods may not prove useful in determining the relation between the core population and outbreak samples. We describe computationally simple resampling methods for use in this situation to distinguish between the different modes of dispersal. First, estimates of heterozygosity can be used to test for direct sampling from the core population and to estimate the effective size of intermediate populations. Second, a test of sharing of alleles, particularly rare alleles, can show whether outbreaks are related to each other rather than arriving as independent samples from the core population. The shared-allele statistic also serves as a genetic distance measure that is appropriate for small samples. These methods were applied to data on a fruit fly pest species, Bactrocera tryoni, which is quarantined from some horticultural areas in Australia. We concluded that the outbreaks in the quarantine zone came from a heterogeneous set of genetically differentiated populations, possibly ones that overwinter in the vicinity of the quarantine zone.

  12. Pest Management Specialist (AFSC 56650).

    ERIC Educational Resources Information Center

    Air Univ., Gunter AFS, Ala. Extension Course Inst.

    This eight-volume student text is designed for use by Air Force personnel enrolled in a self-study extension course for pest management specialists. Covered in the individual volumes are civil engineering; pest management (entomology, pest management planning and coordination, and safety and protective equipment); pest management chemicals and…

  13. Variable disparity-motion estimation based fast three-view video coding

    NASA Astrophysics Data System (ADS)

    Bae, Kyung-Hoon; Kim, Seung-Cheol; Hwang, Yong Seok; Kim, Eun-Soo

    2009-02-01

    In this paper, variable disparity-motion estimation (VDME) based 3-view video coding is proposed. In the encoding, key-frame coding (KFC) based motion estimation and variable disparity estimation (VDE) for effectively fast three-view video encoding are processed. These proposed algorithms enhance the performance of 3-D video encoding/decoding system in terms of accuracy of disparity estimation and computational overhead. From some experiments, stereo sequences of 'Pot Plant' and 'IVO', it is shown that the proposed algorithm's PSNRs is 37.66 and 40.55 dB, and the processing time is 0.139 and 0.124 sec/frame, respectively.

  14. Flexible Generation of Kalman Filter Code

    NASA Technical Reports Server (NTRS)

    Richardson, Julian; Wilson, Edward

    2006-01-01

    Domain-specific program synthesis can automatically generate high quality code in complex domains from succinct specifications, but the range of programs which can be generated by a given synthesis system is typically narrow. Obtaining code which falls outside this narrow scope necessitates either 1) extension of the code generator, which is usually very expensive, or 2) manual modification of the generated code, which is often difficult and which must be redone whenever changes are made to the program specification. In this paper, we describe adaptations and extensions of the AUTOFILTER Kalman filter synthesis system which greatly extend the range of programs which can be generated. Users augment the input specification with a specification of code fragments and how those fragments should interleave with or replace parts of the synthesized filter. This allows users to generate a much wider range of programs without their needing to modify the synthesis system or edit generated code. We demonstrate the usefulness of the approach by applying it to the synthesis of a complex state estimator which combines code from several Kalman filters with user-specified code. The work described in this paper allows the complex design decisions necessary for real-world applications to be reflected in the synthesized code. When executed on simulated input data, the generated state estimator was found to produce comparable estimates to those produced by a handcoded estimator

  15. Pesticide Emergency Resources

    Science.gov Websites

    National Pesticide Information Center 1.800.858.7378 npic@ace.orst.edu We're open from 8:00AM to 12 Plants Pest Control Identify Your Pest Learn About Your Pest Control Your Pest Integrated Pest Management Home Page Emergency Resources Related Topics: Pesticide Incidents Recognition and Management of

  16. 7 CFR 330.200 - Movement of plant pests regulated; permits required.

    Code of Federal Regulations, 2010 CFR

    2010-01-01

    ... 7 Agriculture 5 2010-01-01 2010-01-01 false Movement of plant pests regulated; permits required... AND PLANT HEALTH INSPECTION SERVICE, DEPARTMENT OF AGRICULTURE FEDERAL PLANT PEST REGULATIONS; GENERAL; PLANT PESTS; SOIL, STONE, AND QUARRY PRODUCTS; GARBAGE Movement of Plant Pests § 330.200 Movement of...

  17. 7 CFR 330.202 - Consideration of applications for permits to move plant pests.

    Code of Federal Regulations, 2010 CFR

    2010-01-01

    ... plant pests. 330.202 Section 330.202 Agriculture Regulations of the Department of Agriculture (Continued) ANIMAL AND PLANT HEALTH INSPECTION SERVICE, DEPARTMENT OF AGRICULTURE FEDERAL PLANT PEST REGULATIONS; GENERAL; PLANT PESTS; SOIL, STONE, AND QUARRY PRODUCTS; GARBAGE Movement of Plant Pests § 330.202...

  18. Ras-Induced and Extracellular Signal-Regulated Kinase 1 and 2 Phosphorylation-Dependent Isomerization of Protein Tyrosine Phosphatase (PTP)-PEST by PIN1 Promotes FAK Dephosphorylation by PTP-PEST ▿

    PubMed Central

    Zheng, Yanhua; Yang, Weiwei; Xia, Yan; Hawke, David; Liu, David X.; Lu, Zhimin

    2011-01-01

    Protein tyrosine phosphatase (PTP)-PEST is a critical regulator of cell adhesion and migration. However, the mechanism by which PTP-PEST is regulated in response to oncogenic signaling to dephosphorylate its substrates remains unclear. Here, we demonstrate that activated Ras induces extracellular signal-regulated kinase 1 and 2-dependent phosphorylation of PTP-PEST at S571, which recruits PIN1 to bind to PTP-PEST. Isomerization of the phosphorylated PTP-PEST by PIN1 increases the interaction between PTP-PEST and FAK, which leads to the dephosphorylation of FAK Y397 and the promotion of migration, invasion, and metastasis of v-H-Ras-transformed cells. These findings uncover an important mechanism for the regulation of PTP-PEST in activated Ras-induced tumor progression. PMID:21876001

  19. 75 FR 9141 - Reduced 2009 Estimated Income Tax Payments for Individuals With Small Business Income

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-03-01

    ... Reduced 2009 Estimated Income Tax Payments for Individuals With Small Business Income AGENCY: Internal... their required 2009 estimated income tax payments. The temporary regulations implement section 1212 of... Revenue Code (Code) to provide for reduced 2009 estimated income tax payments for certain qualified...

  20. Calibration process of highly parameterized semi-distributed hydrological model

    NASA Astrophysics Data System (ADS)

    Vidmar, Andrej; Brilly, Mitja

    2017-04-01

    Hydrological phenomena take place in the hydrological system, which is governed by nature, and are essentially stochastic. These phenomena are unique, non-recurring, and changeable across space and time. Since any river basin with its own natural characteristics and any hydrological event therein, are unique, this is a complex process that is not researched enough. Calibration is a procedure of determining the parameters of a model that are not known well enough. Input and output variables and mathematical model expressions are known, while only some parameters are unknown, which are determined by calibrating the model. The software used for hydrological modelling nowadays is equipped with sophisticated algorithms for calibration purposes without possibility to manage process by modeler. The results are not the best. We develop procedure for expert driven process of calibration. We use HBV-light-CLI hydrological model which has command line interface and coupling it with PEST. PEST is parameter estimation tool which is used widely in ground water modeling and can be used also on surface waters. Process of calibration managed by expert directly, and proportionally to the expert knowledge, affects the outcome of the inversion procedure and achieves better results than if the procedure had been left to the selected optimization algorithm. First step is to properly define spatial characteristic and structural design of semi-distributed model including all morphological and hydrological phenomena, like karstic area, alluvial area and forest area. This step includes and requires geological, meteorological, hydraulic and hydrological knowledge of modeler. Second step is to set initial parameter values at their preferred values based on expert knowledge. In this step we also define all parameter and observation groups. Peak data are essential in process of calibration if we are mainly interested in flood events. Each Sub Catchment in the model has own observations group. Third step is to set appropriate bounds to parameters in their range of realistic values. Fourth step is to use of singular value decomposition (SVD) ensures that PEST maintains numerical stability, regardless of how ill-posed is the inverse problem Fifth step is to run PWTADJ1. This creates a new PEST control file in which weights are adjusted such that the contribution made to the total objective function by each observation group is the same. This prevents the information content of any group from being invisible to the inversion process. Sixth step is to add Tikhonov regularization to the PEST control file by running the ADDREG1 utility (Doherty, J, 2013). In adding regularization to the PEST control file ADDREG1 automatically provides a prior information equation for each parameter in which the preferred value of that parameter is equated to its initial value. Last step is to run PEST. We run BeoPEST which a parallel version of PEST and can be run on multiple computers in parallel in same time on TCP communications and this speedup process of calibrations. The case study with results of calibration and validation of the model will be presented.

  1. Economic and physical determinants of the global distributions of crop pests and pathogens.

    PubMed

    Bebber, Daniel P; Holmes, Timothy; Smith, David; Gurr, Sarah J

    2014-05-01

    Crop pests and pathogens pose a significant and growing threat to food security, but their geographical distributions are poorly understood. We present a global analysis of pest and pathogen distributions, to determine the roles of socioeconomic and biophysical factors in determining pest diversity, controlling for variation in observational capacity among countries. Known distributions of 1901 pests and pathogens were obtained from CABI. Linear models were used to partition the variation in pest species per country amongst predictors. Reported pest numbers increased with per capita gross domestic product (GDP), research expenditure and research capacity, and the influence of economics was greater in micro-organisms than in arthropods. Total crop production and crop diversity were the strongest physical predictors of pest numbers per country, but trade and tourism were insignificant once other factors were controlled. Islands reported more pests than mainland countries, but no latitudinal gradient in species richness was evident. Country wealth is likely to be a strong indicator of observational capacity, not just trade flow, as has been interpreted in invasive species studies. If every country had US levels of per capita GDP, then 205 ± 9 additional pests per country would be reported, suggesting that enhanced investment in pest observations will reveal the hidden threat of crop pests and pathogens. © 2014 The Authors. New Phytologist © 2014 New Phytologist Trust.

  2. 7 CFR 330.206 - Permits for plant pest movement associated with National Defense projects.

    Code of Federal Regulations, 2010 CFR

    2010-01-01

    ... 7 Agriculture 5 2010-01-01 2010-01-01 false Permits for plant pest movement associated with... (Continued) ANIMAL AND PLANT HEALTH INSPECTION SERVICE, DEPARTMENT OF AGRICULTURE FEDERAL PLANT PEST REGULATIONS; GENERAL; PLANT PESTS; SOIL, STONE, AND QUARRY PRODUCTS; GARBAGE Movement of Plant Pests § 330.206...

  3. 77 FR 3729 - Notice of Request for Extension of Approval of an Information Collection; Plant Pest, Noxious...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2012-01-25

    ... Collection; Plant Pest, Noxious Weed, and Garbage Regulations AGENCY: Animal and Plant Health Inspection... with plant pest, noxious weed, and garbage regulations. DATES: We will consider all comments that we... pest, noxious weed, and garbage regulations, contact Dr. Shirley Wager- Pag[eacute], Chief, Pest Permit...

  4. 7 CFR 330.205 - Disposal of plant pests when permits are canceled.

    Code of Federal Regulations, 2010 CFR

    2010-01-01

    ... 7 Agriculture 5 2010-01-01 2010-01-01 false Disposal of plant pests when permits are canceled. 330... PLANT HEALTH INSPECTION SERVICE, DEPARTMENT OF AGRICULTURE FEDERAL PLANT PEST REGULATIONS; GENERAL; PLANT PESTS; SOIL, STONE, AND QUARRY PRODUCTS; GARBAGE Movement of Plant Pests § 330.205 Disposal of...

  5. Integrated Pest Management: A Curriculum for Early Care and Education Programs

    ERIC Educational Resources Information Center

    California Childcare Health Program, 2011

    2011-01-01

    This "Integrated Pest Management Toolkit for Early Care and Education Programs" presents practical information about using integrated pest management (IPM) to prevent and manage pest problems in early care and education programs. This curriculum will help people in early care and education programs learn how to keep pests out of early…

  6. Potential application of item-response theory to interpretation of medical codes in electronic patient records

    PubMed Central

    2011-01-01

    Background Electronic patient records are generally coded using extensive sets of codes but the significance of the utilisation of individual codes may be unclear. Item response theory (IRT) models are used to characterise the psychometric properties of items included in tests and questionnaires. This study asked whether the properties of medical codes in electronic patient records may be characterised through the application of item response theory models. Methods Data were provided by a cohort of 47,845 participants from 414 family practices in the UK General Practice Research Database (GPRD) with a first stroke between 1997 and 2006. Each eligible stroke code, out of a set of 202 OXMIS and Read codes, was coded as either recorded or not recorded for each participant. A two parameter IRT model was fitted using marginal maximum likelihood estimation. Estimated parameters from the model were considered to characterise each code with respect to the latent trait of stroke diagnosis. The location parameter is referred to as a calibration parameter, while the slope parameter is referred to as a discrimination parameter. Results There were 79,874 stroke code occurrences available for analysis. Utilisation of codes varied between family practices with intraclass correlation coefficients of up to 0.25 for the most frequently used codes. IRT analyses were restricted to 110 Read codes. Calibration and discrimination parameters were estimated for 77 (70%) codes that were endorsed for 1,942 stroke patients. Parameters were not estimated for the remaining more frequently used codes. Discrimination parameter values ranged from 0.67 to 2.78, while calibration parameters values ranged from 4.47 to 11.58. The two parameter model gave a better fit to the data than either the one- or three-parameter models. However, high chi-square values for about a fifth of the stroke codes were suggestive of poor item fit. Conclusion The application of item response theory models to coded electronic patient records might potentially contribute to identifying medical codes that offer poor discrimination or low calibration. This might indicate the need for improved coding sets or a requirement for improved clinical coding practice. However, in this study estimates were only obtained for a small proportion of participants and there was some evidence of poor model fit. There was also evidence of variation in the utilisation of codes between family practices raising the possibility that, in practice, properties of codes may vary for different coders. PMID:22176509

  7. [Risk assessment and control strategies of pests in Lycium barbarum fields under different managements].

    PubMed

    Zhao, Zi-Hua; Zhang, Rong; He, Da-Han; Wang, Fang; Zhang, Ting-Ting; Zhang, Zong-Shan

    2009-04-01

    In the risk assessment of pests, both the community structure and the environmental factors should be considered at the same time, because of their mutual effects on the outbreak of disaster pests. This paper established a comprehensive assessment system, including 2 sub-systems, 5 respects, and 14 indices. In the meanwhile, risk assessment indices and experience formula were used to analyze the risk degree of pests in Lycium barbarum fields under different managements. It was found that using risk assessment indices and experience formula could obtain similar results. In abandoned field, Aceria palida, Aphis sp., and Paratrioza sinica were the frequent disaster pests, Lema decempunctata, Neoceratitis asiatica, Jaapiella sp., and Phthorimaea sp. were the incidental disaster pests, and Psylliodes obscurofaciata and Phthorimaea sp. were general pests. In organic field, the frequent disaster pests were the same species as those in abandoned field, while P. indicus, Jaapiella sp. and Phthorimaea sp. were the incidental disaster pests. In chemical control field, A. palida, Aphis sp., P. sinica, and P. indicus were the frequent disaster pests, while Jaapiella sp. and Phthorimaea sp. were the incidental disaster pests. Optimal 5 separations most fitted the division of pest sub-communities in L. barbarum fields, which were infancy period (from March 28 to April 15), outbreak I period (from April 15 to July 18), dormancy period (from July 18 to September 8), outbreak II period (from September 8 to October 15), and recession period (after October 15). The matrix of correlation coefficient showed that the dynamics of pests in L. barbarum fields under different managements were significantly correlated with each other, suggesting that the dynamics of pest populations was similar in different L. barbarum fields, which had two population establishment stages and one exponential growth stage in every year. The optimal controlling stages were from late infancy period to early and middle outbreak I periods, and from late dormancy period to early outbreak II period, which were very critical for pest control.

  8. Quality of recording of diabetes in the UK: how does the GP's method of coding clinical data affect incidence estimates? Cross-sectional study using the CPRD database.

    PubMed

    Tate, A Rosemary; Dungey, Sheena; Glew, Simon; Beloff, Natalia; Williams, Rachael; Williams, Tim

    2017-01-25

    To assess the effect of coding quality on estimates of the incidence of diabetes in the UK between 1995 and 2014. A cross-sectional analysis examining diabetes coding from 1995 to 2014 and how the choice of codes (diagnosis codes vs codes which suggest diagnosis) and quality of coding affect estimated incidence. Routine primary care data from 684 practices contributing to the UK Clinical Practice Research Datalink (data contributed from Vision (INPS) practices). Incidence rates of diabetes and how they are affected by (1) GP coding and (2) excluding 'poor' quality practices with at least 10% incident patients inaccurately coded between 2004 and 2014. Incidence rates and accuracy of coding varied widely between practices and the trends differed according to selected category of code. If diagnosis codes were used, the incidence of type 2 increased sharply until 2004 (when the UK Quality Outcomes Framework was introduced), and then flattened off, until 2009, after which they decreased. If non-diagnosis codes were included, the numbers continued to increase until 2012. Although coding quality improved over time, 15% of the 666 practices that contributed data between 2004 and 2014 were labelled 'poor' quality. When these practices were dropped from the analyses, the downward trend in the incidence of type 2 after 2009 became less marked and incidence rates were higher. In contrast to some previous reports, diabetes incidence (based on diagnostic codes) appears not to have increased since 2004 in the UK. Choice of codes can make a significant difference to incidence estimates, as can quality of recording. Codes and data quality should be checked when assessing incidence rates using GP data. Published by the BMJ Publishing Group Limited. For permission to use (where not already granted under a licence) please go to http://www.bmj.com/company/products-services/rights-and-licensing/.

  9. Performance of concatenated Reed-Solomon trellis-coded modulation over Rician fading channels

    NASA Technical Reports Server (NTRS)

    Moher, Michael L.; Lodge, John H.

    1990-01-01

    A concatenated coding scheme for providing very reliable data over mobile-satellite channels at power levels similar to those used for vocoded speech is described. The outer code is a shorter Reed-Solomon code which provides error detection as well as error correction capabilities. The inner code is a 1-D 8-state trellis code applied independently to both the inphase and quadrature channels. To achieve the full error correction potential of this inner code, the code symbols are multiplexed with a pilot sequence which is used to provide dynamic channel estimation and coherent detection. The implementation structure of this scheme is discussed and its performance is estimated.

  10. Summary Factsheets for Pesticide Permittees

    EPA Pesticide Factsheets

    Summaries of the 2016 Pesticide General Permit (PGP) requirements and provisions covering mosquito and other flying insect pest control; weed and algae pest control; animal pest control; and forest canopy pest control.

  11. Origin of Pest Lineages of the Colorado Potato Beetle (Coleoptera: Chrysomelidae).

    PubMed

    Izzo, Victor M; Chen, Yolanda H; Schoville, Sean D; Wang, Cong; Hawthorne, David J

    2018-04-02

    Colorado potato beetle (Leptinotarsa decemlineata Say [Coleoptera: Chrysomelidae]) is a pest of potato throughout the Northern Hemisphere, but little is known about the beetle's origins as a pest. We sampled the beetle from uncultivated Solanum host plants in Mexico, and from pest and non-pest populations in the United States and used mitochondrial DNA and nuclear loci to examine three hypotheses on the origin of the pest lineages: 1) the pest beetles originated from Mexican populations, 2) they descended from hybridization between previously divergent populations, or 3) they descended from populations that are native to the Plains states in the United States. Mitochondrial haplotypes of non-pest populations from Mexico and Arizona differed substantially from beetles collected from the southern plains and potato fields in the United States, indicating that beetles from Mexico and Arizona did not contribute to founding the pest lineages. Similar results were observed for AFLP and microsatellite data . In contrast, non-pest populations from the states of Colorado, Kansas, Nebraska, New Mexico, and Texas were genetically similar to U.S. pest populations, indicating that they contributed to the founding of the pest lineages. Most of the pest populations do not show a significant reduction in genetic diversity compared to the plains populations in the United States. We conclude that genetically heterogeneous beetle populations expanded onto potato from native Solanum hosts. This mode of host range expansion may have contributed to the abundant genetic diversity of contemporary populations, perhaps contributing to the rapid evolution of climate tolerance, host range, and insecticide resistance.

  12. Integrating drivers influencing the detection of plant pests carried in the international cut flower trade.

    PubMed

    Areal, F J; Touza, J; MacLeod, A; Dehnen-Schmutz, K; Perrings, C; Palmieri, M G; Spence, N J

    2008-12-01

    This paper analyses the cut flower market as an example of an invasion pathway along which species of non-indigenous plant pests can travel to reach new areas. The paper examines the probability of pest detection by assessing information on pest detection and detection effort associated with the import of cut flowers. We test the link between the probability of plant pest arrivals, as a precursor to potential invasion, and volume of traded flowers using count data regression models. The analysis is applied to the UK import of specific genera of cut flowers from Kenya between 1996 and 2004. There is a link between pest detection and the Genus of cut flower imported. Hence, pest detection efforts should focus on identifying and targeting those imported plants with a high risk of carrying pest species. For most of the plants studied, efforts allocated to inspection have a significant influence on the probability of pest detection. However, by better targeting inspection efforts, it is shown that plant inspection effort could be reduced without increasing the risk of pest entry. Similarly, for most of the plants analysed, an increase in volume traded will not necessarily lead to an increase in the number of pests entering the UK. For some species, such as Carthamus and Veronica, the volume of flowers traded has a significant and positive impact on the likelihood of pest detection. We conclude that analysis at the rank of plant Genus is important both to understand the effectiveness of plant pest detection efforts and consequently to manage the risk of introduction of non-indigenous species.

  13. Iowa Commercial Pesticide Applicator Manual, Category 7A: General and Household Pest Control. CS-19. Category 7B: Termite Control, CS-20. Category 7C: Food Industry Pest Control, CS-21. Category 7D: Community Insect Control, CS-22.

    ERIC Educational Resources Information Center

    Stockdale, Harold J., Ed.; And Others

    This manual provides information needed to meet specific standards for certification as a pesticide applicator. The first section discusses general and household pest control and is concerned with parasitic pests and man, stored product pests, and irritating vertebrates. Section two is devoted to identifying and controlling structural pests such…

  14. Small-Scale Spatio-Temporal Distribution of Bactrocera minax (Enderlein) (Diptera: Tephritidae) Using Probability Kriging.

    PubMed

    Wang, S Q; Zhang, H Y; Li, Z L

    2016-10-01

    Understanding spatio-temporal distribution of pest in orchards can provide important information that could be used to design monitoring schemes and establish better means for pest control. In this study, the spatial and temporal distribution of Bactrocera minax (Enderlein) (Diptera: Tephritidae) was assessed, and activity trends were evaluated by using probability kriging. Adults of B. minax were captured in two successive occurrences in a small-scale citrus orchard by using food bait traps, which were placed both inside and outside the orchard. The weekly spatial distribution of B. minax within the orchard and adjacent woods was examined using semivariogram parameters. The edge concentration was discovered during the most weeks in adult occurrence, and the population of the adults aggregated with high probability within a less-than-100-m-wide band on both of the sides of the orchard and the woods. The sequential probability kriged maps showed that the adults were estimated in the marginal zone with higher probability, especially in the early and peak stages. The feeding, ovipositing, and mating behaviors of B. minax are possible explanations for these spatio-temporal patterns. Therefore, spatial arrangement and distance to the forest edge of traps or spraying spot should be considered to enhance pest control on B. minax in small-scale orchards.

  15. Geostatistics and Geographic Information Systems to Study the Spatial Distribution of Grapholita molesta (Busck) (Lepidoptera: Tortricidae) in Peach Fields.

    PubMed

    Duarte, F; Calvo, M V; Borges, A; Scatoni, I B

    2015-08-01

    The oriental fruit moth, Grapholita molesta (Busck), is the most serious pest in peach, and several insecticide applications are required to reduce crop damage to acceptable levels. Geostatistics and Geographic Information Systems (GIS) are employed to measure the range of spatial correlation of G. molesta in order to define the optimum sampling distance for performing spatial analysis and to determine the current distribution of the pest in peach orchards of southern Uruguay. From 2007 to 2010, 135 pheromone traps per season were installed and georeferenced in peach orchards distributed over 50,000 ha. Male adult captures were recorded weekly from September to April. Structural analysis of the captures was performed, yielding 14 semivariograms for the accumulated captures analyzed by generation and growing season. Two sets of maps were constructed to describe the pest distribution. Nine significant models were obtained in the 14 evaluated periods. The range estimated for the correlation was from 908 to 6884 m. Three hot spots of high population level and some areas with comparatively low populations were constant over the 3-year period, while there is a greater variation in the size of the population in different generations and years in other areas.

  16. Projecting the current and future potential global distribution of Hyphantria cunea (Lepidoptera: Arctiidae) using CLIMEX.

    PubMed

    Ge, Xuezhen; He, Shanyong; Zhu, Chenyi; Wang, Tao; Xu, Zhichun; Shixiang, Zong

    2018-05-23

    The international invasive and quarantined defoliating insect Hyphantria cunea Drury (Lepidoptera: Arctiidae) causes huge ecological and economic losses in the world. The future climate change may alter the distribution of H. cunea and aggravate the damage. In the present study, we used CLIMEX to project the potential global distribution of H. cunea according to both historical climate data (1950-2000) and future climate warming estimates (2011-2100) to define the impact of climate change. Under the historical climate scenario, we found that H. cunea can survive on every continent, and temperature is the main factor that limits its establishment. With climate change, the suitability will increase in middle and high latitude regions, while decrease in the low latitude regions. Besides, tropic regions will be most sensitive to the climate change impacts for the pest to survive. The impacts of climate change will also increase over time, whether the positive impacts or negative impacts. The projected potential distributions provide a theoretical basis for quarantine and control strategies for the management of this pest in each country. Furthermore, these results provide substantial guidance for studies of the effects of climate change on other major forest pests. This article is protected by copyright. All rights reserved. This article is protected by copyright. All rights reserved.

  17. Models for integrated pest control and their biological implications.

    PubMed

    Tang, Sanyi; Cheke, Robert A

    2008-09-01

    Successful integrated pest management (IPM) control programmes depend on many factors which include host-parasitoid ratios, starting densities, timings of parasitoid releases, dosages and timings of insecticide applications and levels of host-feeding and parasitism. Mathematical models can help us to clarify and predict the effects of such factors on the stability of host-parasitoid systems, which we illustrate here by extending the classical continuous and discrete host-parasitoid models to include an IPM control programme. The results indicate that one of three control methods can maintain the host level below the economic threshold (ET) in relation to different ET levels, initial densities of host and parasitoid populations and host-parasitoid ratios. The effects of host intrinsic growth rate and parasitoid searching efficiency on host mean outbreak period can be calculated numerically from the models presented. The instantaneous pest killing rate of an insecticide application is also estimated from the models. The results imply that the modelling methods described can help in the design of appropriate control strategies and assist management decision-making. The results also indicate that a high initial density of parasitoids (such as in inundative releases) and high parasitoid inter-generational survival rates will lead to more frequent host outbreaks and, therefore, greater economic damage. The biological implications of this counter intuitive result are discussed.

  18. One gene in diamondback moth confers resistance to four Bacillus thuringiensis toxins

    PubMed Central

    Tabashnik, Bruce E.; Liu, Yong-Biao; Finson, Naomi; Masson, Luke; Heckel, David G.

    1997-01-01

    Environmentally benign insecticides derived from the soil bacterium Bacillus thuringiensis (Bt) are the most widely used biopesticides, but their success will be short-lived if pests quickly adapt to them. The risk of evolution of resistance by pests has increased, because transgenic crops producing insecticidal proteins from Bt are being grown commercially. Efforts to delay resistance with two or more Bt toxins assume that independent mutations are required to counter each toxin. Moreover, it generally is assumed that resistance alleles are rare in susceptible populations. We tested these assumptions by conducting single-pair crosses with diamondback moth (Plutella xylostella), the first insect known to have evolved resistance to Bt in open field populations. An autosomal recessive gene conferred extremely high resistance to four Bt toxins (Cry1Aa, Cry1Ab, Cry1Ac, and Cry1F). The finding that 21% of the individuals from a susceptible strain were heterozygous for the multiple-toxin resistance gene implies that the resistance allele frequency was 10 times higher than the most widely cited estimate of the upper limit for the initial frequency of resistance alleles in susceptible populations. These findings suggest that pests may evolve resistance to some groups of toxins much faster than previously expected. PMID:9050831

  19. Alternatives to neonicotinoid insecticides for pest control: case studies in agriculture and forestry.

    PubMed

    Furlan, Lorenzo; Kreutzweiser, David

    2015-01-01

    Neonicotinoid insecticides are widely used for control of insect pests around the world and are especially pervasive in agricultural pest management. There is a growing body of evidence indicating that the broad-scale and prophylactic uses of neonicotinoids pose serious risks of harm to beneficial organisms and their ecological function. This provides the impetus for exploring alternatives to neonicotinoid insecticides for controlling insect pests. We draw from examples of alternative pest control options in Italian maize production and Canadian forestry to illustrate the principles of applying alternatives to neonicotinoids under an integrated pest management (IPM) strategy. An IPM approach considers all relevant and available information to make informed management decisions, providing pest control options based on actual need. We explore the benefits and challenges of several options for management of three insect pests in maize crops and an invasive insect pest in forests, including diversifying crop rotations, altering the timing of planting, tillage and irrigation, using less sensitive crops in infested areas, applying biological control agents, and turning to alternative reduced risk insecticides. Continued research into alternatives is warranted, but equally pressing is the need for information transfer and training for farmers and pest managers and the need for policies and regulations to encourage the adoption of IPM strategies and their alternative pest control options.

  20. Validating spatiotemporal predictions of an important pest of small grains.

    PubMed

    Merrill, Scott C; Holtzer, Thomas O; Peairs, Frank B; Lester, Philip J

    2015-01-01

    Arthropod pests are typically managed using tactics applied uniformly to the whole field. Precision pest management applies tactics under the assumption that within-field pest pressure differences exist. This approach allows for more precise and judicious use of scouting resources and management tactics. For example, a portion of a field delineated as attractive to pests may be selected to receive extra monitoring attention. Likely because of the high variability in pest dynamics, little attention has been given to developing precision pest prediction models. Here, multimodel synthesis was used to develop a spatiotemporal model predicting the density of a key pest of wheat, the Russian wheat aphid, Diuraphis noxia (Kurdjumov). Spatially implicit and spatially explicit models were synthesized to generate spatiotemporal pest pressure predictions. Cross-validation and field validation were used to confirm model efficacy. A strong within-field signal depicting aphid density was confirmed with low prediction errors. Results show that the within-field model predictions will provide higher-quality information than would be provided by traditional field scouting. With improvements to the broad-scale model component, the model synthesis approach and resulting tool could improve pest management strategy and provide a template for the development of spatially explicit pest pressure models. © 2014 Society of Chemical Industry.

  1. De novo characterization of microRNAs in oriental fruit moth Grapholita molesta and selection of reference genes for normalization of microRNA expression

    PubMed Central

    Zhang, Jing; Zhang, Qingwen; Liu, Xiaoxia; Li, Zhen

    2017-01-01

    MicroRNAs (miRNAs) are a group of endogenous non-coding small RNAs that have critical regulatory functions in almost all known biological processes at the post-transcriptional level in a variety of organisms. The oriental fruit moth Grapholita molesta is one of the most serious pests in orchards worldwide and threatens the production of Rosacea fruits. In this study, a de novo small RNA library constructed from mixed stages of G. molesta was sequenced through Illumina sequencing platform and a total of 536 mature miRNAs consisting of 291 conserved and 245 novel miRNAs were identified. Most of the conserved and novel miRNAs were detected with moderate abundance. The miRNAs in the same cluster normally showed correlated expressional profiles. A comparative analysis of the 79 conserved miRNA families within 31 arthropod species indicated that these miRNA families were more conserved among insects and within orders of closer phylogenetic relationships. The KEGG pathway analysis and network prediction of target genes indicated that the complex composed of miRNAs, clock genes and developmental regulation genes may play vital roles to regulate the developmental circadian rhythm of G. molesta. Furthermore, based on the sRNA library of G. molesta, suitable reference genes were selected and validated for study of miRNA transcriptional profile in G. molesta under two biotic and six abiotic experimental conditions. This study systematically documented the miRNA profile in G. molesta, which could lay a foundation for further understanding of the regulatory roles of miRNAs in the development and metabolism in this pest and might also suggest clues to the development of genetic-based techniques for agricultural pest control. PMID:28158242

  2. 7 CFR 319.56-5 - Pest-free areas.

    Code of Federal Regulations, 2010 CFR

    2010-01-01

    ... 7 Agriculture 5 2010-01-01 2010-01-01 false Pest-free areas. 319.56-5 Section 319.56-5 Agriculture..., DEPARTMENT OF AGRICULTURE FOREIGN QUARANTINE NOTICES Fruits and Vegetables § 319.56-5 Pest-free areas. As... provided that the fruits or vegetables originate from an area that is free of a specific pest or pests. In...

  3. A Qualitative Study of Urban and Suburban Elementary Student Understandings of Pest-Related Science and Agricultural Education Benchmarks.

    ERIC Educational Resources Information Center

    Trexler, Cary J.

    2000-01-01

    Clinical interviews with nine fifth graders revealed that experiences play a pivotal role in their understanding of pests. They lack well-developed schema and language to discuss pest management. A foundation of core biological concepts was necessary for understanding pests and pest management. (Conatains 34 references.) (SK)

  4. Mutualisms and Population Regulation: Mechanism Matters

    PubMed Central

    Jha, Shalene; Allen, David; Liere, Heidi; Perfecto, Ivette; Vandermeer, John

    2012-01-01

    For both applied and theoretical ecological science, the mutualism between ants and their hemipteran partners is iconic. In this well-studied interaction, ants are assumed to provide hemipterans protection from natural enemies in exchange for nutritive honeydew. Despite decades of research and the potential importance in pest control, the precise mechanism producing this mutualism remains contested. By analyzing maximum likelihood parameter estimates of a hemipteran population model, we show that the mechanism of the mutualism is direct, via improved hemipteran growth rates, as opposed to the frequently assumed indirect mechanism, via harassment of the specialist parasites and predators of the hemipterans. Broadly, this study demonstrates that the management of mutualism-based ecosystem services requires a mechanistic understanding of mutualistic interactions. A consequence of this finding is the counter intuitive demonstration that preserving ant participation in the ant-hemipteran mutualism may be the best way of insuring pest control. PMID:22927978

  5. A noda-like virus isolated from the sweetpotato pest spodoptera eridania (Cramer) (Lep.; noctuidae)

    PubMed

    Zeddam; Rodriguez; Ravallec; Lagnaoui

    1999-11-01

    A small isometric virus has been isolated from larvae of the sweetpotato pest Spodoptera eridania (Cramer) collected near Pariacoto, Ancash province, Peru. It is designated the Pariacoto virus (PaV). In addition to its high pathogenicity on its natural host Spodoptera eridania, PaV was found to replicate in Spodoptera ochrea (Hampson) larvae but not in Spodoptera frugiperda (Smith) larvae. The size of the viral particle was estimated to be about 30 nm in diameter. Polyacrylamide gel electrophoresis showed a protein of approximately 40.5 kDa. After agarose gel electrophoresis, the viral genome appeared to be bipartite RNA. Gel immunodiffusion tests showed no serological relationship between PaV and Nodamura virus, the type species for insect nodaviruses. Electron microscopy confirmed that viral replication occurs in the cytoplasm. These properties are similar to those of other members of family Nodaviridae, to which the virus is currently assigned. Copyright 1999 Academic Press.

  6. Protein tyrosine phosphatase-PEST (PTP-PEST) regulates mast cell-activating signals in PTP activity-dependent and -independent manners.

    PubMed

    Motohashi, Satoru; Koizumi, Karen; Honda, Reika; Maruyama, Atsuko; Palmer, Helen E F; Mashima, Keisuke

    2014-01-01

    Aggregation of the high-affinity IgE receptor (FcεRI) in mast cells leads to degranulation and production of numerous cytokines and lipid mediators that promote allergic inflammation. Tyrosine phosphorylation of proteins in response to FcεRI aggregation has been implicated in mast cell activation. Here, we determined the role of PTP-PEST (encoded by PTPN12) in the regulation of mast cell activation using the RBL-2H3 rat basophilic leukemia cell line as a model. PTP-PEST expression was significantly induced upon FcεRI-crosslinking, and aggregation of FcεRI induced the phosphorylation of PTP-PEST at Ser39, thus resulting in the suppression of PTP activity. By overexpressing a phosphatase-dead mutant (PTP-PEST CS) and a constitutively active mutant (PTP-PEST SA) in RBL-2H3 cells, we showed that PTP-PEST decreased degranulation and enhanced IL-4 and IL-13 transcription in FcεRI-crosslinked RBL-2H3 cells, but PTP activity of PTP-PEST was not necessary for this regulation. However, FcεRI-induced TNF-α transcription was increased by the overexpression of PTP-PEST SA and suppressed by the overexpression of PTP-PEST CS. Taken together, these results suggest that PTP-PEST is involved in the regulation of FcεRI-mediated mast cell activation through at least two different processes represented by PTP activity-dependent and -independent pathways. Copyright © 2014 Elsevier Inc. All rights reserved.

  7. Estimation of forest structural parameters using 5 and 10 meter SPOT-5 satellite data

    Treesearch

    Peter T. Wolter; Phillip A. Townsend; Brian R. Sturtevant

    2009-01-01

    Large areas of forest in the US and Canada are affected by insects and disease each year. Over the past century, outbreaks of the Eastern spruce budworm have become more frequent and severe. The notion of designing a more pest resistant landscape through prescriptive management practices hinges on our ability to effectively model forest?insect dynamics at regional...

  8. Physical mapping of the genomic DNA of the Oryctes rhinoceros baculovirus, KI.

    PubMed

    Mohan, K S; Gopinathan, K P

    1991-11-15

    A non-occluded baculovirus, OBV-KI has been isolated from the insect pest, Oryctes rhinoceros. The viral genome is estimated to be 123 kb, with a G + C content of 43 mol% and no detectible methylated bases. A restriction map of the OBV-KI genome for BamHI, EcoRI, HindIII, PstI, SalI and XbaI has been constructed.

  9. Effect of wet bulb depression on heat sterilization time of slash pine lumber

    Treesearch

    William T. Simpson

    For international trade, heat sterilization of wood products is often required to prevent the spread of insects and pathogens. Application of heat sterilization requires estimates of the time necessary to heat the center of the wood configuration to the temperature required to kill the insect or other pest. The nature of the heating medium was found to have a...

  10. [A New Pest of Amomum villosum in Xishuangbanna].

    PubMed

    Peng, Jian-min; Wang, Yan-fang; Zhang, Li-xia; Li, Rong-ying; Ma, Xiao-jun

    2015-11-01

    To report a new pest of Amomum villosum and its distribution, occurrence regularity and damage situation, in order to provide reference for its control. Reared the pest larvae, observed the morphological characters, and made a preliminary investigation on its distribution, occurrence regularity and damage situation. Through macroscopic examination, the pest was identified as Anisodera rugulosa, which distributed in the main producing areas of Amomum villosum in Xishuangbanna, the pest larvae ate the inside of Amomum villosum fruit, which made the fruit formed holes, more seriously, it made the whole fruit rot black. The pest causes the fruit yield reduction of Amomum villosum. Pest control work needs to be carry out as soon as possible.

  11. Risk maps for targeting exotic plant pest detection programs in the United States

    Treesearch

    R.D. Magarey; D.M. Borchert; J.S. Engle; M Garcia-Colunga; Frank H. Koch; et al

    2011-01-01

    In the United States, pest risk maps are used by the Cooperative Agricultural Pest Survey for spatial and temporal targeting of exotic plant pest detection programs. Methods are described to create standardized host distribution, climate and pathway risk maps for the top nationally ranked exotic pest targets. Two examples are provided to illustrate the risk mapping...

  12. Cockroach Clean-Up Tour . Urban Pest Management. Teaching Environmental Living Skills to Elementary Students.

    ERIC Educational Resources Information Center

    Cowles, Kathleen Letcher

    Integrated Pest Management (IPM), a decision-making approach to pest control, is designed to help individuals decide if pest suppression treatments are necessary, when they should be initiated, where they should be applied, and what strategy/mix of tatics to use. IPM combines a variety of approaches with which to manage pests, including human…

  13. The Phosphatase PTP-PEST/PTPN12 Regulates Endothelial Cell Migration and Adhesion, but Not Permeability, and Controls Vascular Development and Embryonic Viability*

    PubMed Central

    Souza, Cleiton Martins; Davidson, Dominique; Rhee, Inmoo; Gratton, Jean-Philippe; Davis, Elaine C.; Veillette, André

    2012-01-01

    Protein-tyrosine phosphatase (PTP)-PEST (PTPN12) is ubiquitously expressed. It is essential for normal embryonic development and embryonic viability in mice. Herein we addressed the involvement of PTP-PEST in endothelial cell functions using a combination of genetic and biochemical approaches. By generating primary endothelial cells from an inducible PTP-PEST-deficient mouse, we found that PTP-PEST is not needed for endothelial cell differentiation and proliferation or for the control of endothelial cell permeability. Nevertheless, it is required for integrin-mediated adhesion and migration of endothelial cells. PTP-PEST-deficient endothelial cells displayed increased tyrosine phosphorylation of Cas, paxillin, and Pyk2, which were previously also implicated in integrin functions. By eliminating PTP-PEST in endothelial cells in vivo, we obtained evidence that expression of PTP-PEST in endothelial cells is required for normal vascular development and embryonic viability. Therefore, PTP-PEST is a key regulator of integrin-mediated functions in endothelial cells seemingly through its capacity to control Cas, paxillin, and Pyk2. This function explains at least in part the essential role of PTP-PEST in embryonic development and viability. PMID:23105101

  14. Enhanced protective efficacy against tuberculosis provided by a recombinant urease deficient BCG expressing heat shock protein 70-major membrane protein-II having PEST sequence.

    PubMed

    Tsukamoto, Yumiko; Maeda, Yumi; Tamura, Toshiki; Mukai, Tetsu; Mitarai, Satoshi; Yamamoto, Saburo; Makino, Masahiko

    2016-12-07

    Enhancement of the T cell-stimulating ability of Mycobacterium bovis BCG (BCG) is necessary to develop an effective tuberculosis vaccine. For this purpose, we introduced the PEST-HSP70-major membrane protein-II (MMPII)-PEST fusion gene into ureC-gene depleted recombinant (r) BCG to produce BCG-PEST. The PEST sequence is involved in the proteasomal processing of antigens. BCG-PEST secreted the PEST-HSP70-MMPII-PEST fusion protein and more efficiently activated human monocyte-derived dendritic cells (DCs) in terms of phenotypic changes and cytokine productions than an empty-vector-introduced BCG or HSP70-MMPII gene-introduced ureC gene-depleted BCG (BCG-DHTM). Autologous human naïve CD8 + T cells and naïve CD4 + T cells were effectively activated by BCG-PEST and produced IFN-γ in an antigen-specific manner through DCs. These T cell activations were closely associated with phagosomal maturation and intraproteasomal protein degradation in antigen-presenting cells. Furthermore, BCG-PEST produced long-lasting memory-type T cells in C57BL/6 mice more efficiently than control rBCGs. Moreover, a single subcutaneous injection of BCG-PEST more effectively reduced the multiplication of subsequent aerosol-challenged Mycobacterium tuberculosis of the standard H37Rv strain and clinically isolated Beijing strain in the lungs than control rBCGs. The vaccination effect of BCG-PEST lasted for at least 6months. These results indicate that BCG-PEST may be able to efficiently control the spread of tuberculosis in human. Copyright © 2016 Elsevier Ltd. All rights reserved.

  15. Information for Child Care Providers about Pesticides/Integrated Pest Management

    EPA Pesticide Factsheets

    Learn about pesticides/integrated pest management, the health effects associated with exposure to pests and pesticides, and the steps that can be taken to use integrated pest management strategies in childcare facilities.

  16. Computing travel time when the exact address is unknown: a comparison of point and polygon ZIP code approximation methods.

    PubMed

    Berke, Ethan M; Shi, Xun

    2009-04-29

    Travel time is an important metric of geographic access to health care. We compared strategies of estimating travel times when only subject ZIP code data were available. Using simulated data from New Hampshire and Arizona, we estimated travel times to nearest cancer centers by using: 1) geometric centroid of ZIP code polygons as origins, 2) population centroids as origin, 3) service area rings around each cancer center, assigning subjects to rings by assuming they are evenly distributed within their ZIP code, 4) service area rings around each center, assuming the subjects follow the population distribution within the ZIP code. We used travel times based on street addresses as true values to validate estimates. Population-based methods have smaller errors than geometry-based methods. Within categories (geometry or population), centroid and service area methods have similar errors. Errors are smaller in urban areas than in rural areas. Population-based methods are superior to the geometry-based methods, with the population centroid method appearing to be the best choice for estimating travel time. Estimates in rural areas are less reliable.

  17. Acidic deposition, plant pests, and the fate of forest ecosystems.

    PubMed

    Gragnani, A; Gatto, M; Rinaldi, S

    1998-12-01

    We present and analyze a nonlinear dynamical system modelling forest-pests interactions and the way they are affected by acidic deposition. The model includes mechanisms of carbon and nitrogen exchange between soil and vegetation, biomass decomposition and microbial mineralization, and defoliation by pest grazers, which are partially controlled by avian or mammalian predators. Acidic deposition is assumed to directly damage vegetation, to decrease soil pH, which in turn damages roots and inhibits microbial activity, and to predispose trees to increased pest attack. All the model parameters are set to realistic values except the inflow of protons to soil and the predation mortality inflicted to the pest which are allowed to vary inside reasonable ranges. A numerical bifurcation analysis with respect to these two parameters is carried out. Five functioning modes are uncovered: (i) pest-free equilibrium; (ii) pest persisting at endemic equilibrium; (iii) forest-pest permanent oscillations; (iv) bistable behavior with the system converging either to pest-free equilibrium or endemic pest presence in accordance with initial conditions; (v) bistable behavior with convergence to endemic pest presence or permanent oscillations depending on initial conditions. Catastrophic bifurcations between the different behavior modes are possible, provided the abundance of predators is not too small. Numerical simulation shows that increasing acidic load can lead the forest to collapse in a short time period without important warning signals. Copyright 1998 Academic Press.

  18. Laboratory Population Parameters and Field Impact of the Larval Endoparasitoid Pseudapanteles dignus (Hymenoptera: Braconidae) on its Host Tuta absoluta (Lepidoptera: Gelechiidae) in Tomato Crops in Argentina.

    PubMed

    Nieves, Eliana L; Pereyra, Patricia C; Luna, María G; Medone, Paula; Sánchez, Norma E

    2015-08-01

    The tomato moth, Tuta absoluta (Meyrick) (Lepidoptera: Gelechiidae), is a key pest of tomato, Lycopersicon esculentum L., crops in Central and South America. At present it is dispersing rapidly in Africa and Eurasian continents as an invasive pest, threatening worldwide tomato production. Pseudapanteles dignus (Muesebeck) (Hymenoptera: Braconidae) is an American endoparasitoid reported as the main natural enemy of T. absoluta in commercial tomato. To gain knowledge of the potential role of P. dignus in the biological control of this pest, we determined its population parameters in laboratory and the parasitoid's impact on T. absoluta in the field. In laboratory, lifetime fecundity was 193 eggs per female, and longevity was 24 and 26 d for female and male, respectively. The finite rate of increase (λ) was 1.15 per female per day and the intrinsic rate of natural increase (r(m)) was 0.14. The net reproductive rate (R(0)) was found to be 51.2, and generation time (T) 28.8 d. The time for doubling the population (DT) was 5 d. Furthermore, field parasitism of T. absoluta varied between 33 and 64% in the different years studied. Population parameters estimated in this study can be considered baseline information for a mass-rearing protocol of this parasitoid. Moreover, growth rates of P. dignus, particularly r(m), and its impact on field populations of T. absoluta indicated that this parasitoid is a valuable candidate for biological control of this pest. © The Authors 2015. Published by Oxford University Press on behalf of Entomological Society of America. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

  19. Market Forces and Technological Substitutes Cause Fluctuations in the Value of Bat Pest-Control Services for Cotton

    PubMed Central

    López-Hoffman, Laura; Wiederholt, Ruscena; Sansone, Chris; Bagstad, Kenneth J.; Cryan, Paul; Diffendorfer, Jay E.; Goldstein, Joshua; LaSharr, Kelsie; Loomis, John; McCracken, Gary; Medellín, Rodrigo A.; Russell, Amy; Semmens, Darius

    2014-01-01

    Critics of the market-based, ecosystem services approach to biodiversity conservation worry that volatile market conditions and technological substitutes will diminish the value of ecosystem services and obviate the “economic benefits” arguments for conservation. To explore the effects of market forces and substitutes on service values, we assessed how the value of the pest-control services provided by Mexican free-tailed bats (Tadarida brasiliensis mexicana) to cotton production in the southwestern U.S. has changed over time. We calculated service values each year from 1990 through 2008 by estimating the value of avoided crop damage and the reduced social and private costs of insecticide use in the presence of bats. Over this period, the ecosystem service value declined by 79% ($19.09 million U.S. dollars) due to the introduction and widespread adoption of Bt (Bacillus thuringiensis) cotton transgenically modified to express its own pesticide, falling global cotton prices and the reduction in the number of hectares in the U.S. planted with cotton. Our results demonstrate that fluctuations in market conditions can cause temporal variation in ecosystem service values even when ecosystem function – in this case bat population numbers – is held constant. Evidence is accumulating, however, of the evolution of pest resistance to Bt cotton, suggesting that the value of bat pest-control services may increase again. This gives rise to an economic option value argument for conserving Mexican free-tailed bat populations. We anticipate that these results will spur discussion about the role of ecosystem services in biodiversity conservation in general, and bat conservation in particular. PMID:24498400

  20. Household use of insecticide consumer products in a dengue endemic area in México

    PubMed Central

    Loroño-Pino, María Alba; Chan-Dzul, Yamili N.; Zapata-Gil, Rocio; Carrillo-Solís, Claudia; Uitz-Mena, Ana; García-Rejón, Julián E.; Keefe, Thomas J.; Beaty, Barry J.; Eisen, Lars

    2014-01-01

    Objectives To evaluate household use of insecticide consumer products to kill mosquitoes and other insect pests, as well as the expenditures for using these products, in a dengue endemic area in México. Methods A questionnaire was administered to 441 households in Mérida City or other communities in Yucatán State to assess household use of insecticide consumer products. Results Most (86.6%) households took action to kill insect pests with consumer products. Among those households, the most commonly used product types were insecticide aerosol spray cans (73.6%), electric plug-in insecticide emitters (37.4%), and mosquito coils (28.3%). Mosquitoes were targeted by 89.7% of households using insecticide aerosol spray cans and >99% of households using electric plug-in insecticide emitters or mosquito coils. During the part of the year when a given product type was used, the frequency of use was daily or every 2 days in most of the households for insecticide aerosol spray cans (61.4%), electric plug-in insecticide emitters (76.2%), and mosquito coils (82.1%). For all products used to kill insect pests, the median annual estimated expenditure per household that took action was 408 Mexican pesos ($MXN), which corresponded to ∼31 $U.S. These numbers are suggestive of an annual market in excess of 75 million $MXN (>5.7 million $U.S.) for Mérida City alone. Conclusion Mosquitoes threaten human health and are major nuisances in homes in the study area in México. Households were found to have taken vigorous action to kill mosquitoes and other insect pests and spent substantial amounts of money on insecticide consumer products. PMID:25040259

  1. Activity of vegetative insecticidal proteins Vip3Aa58 and Vip3Aa59 of Bacillus thuringiensis against lepidopteran pests.

    PubMed

    Baranek, Jakub; Kaznowski, Adam; Konecka, Edyta; Naimov, Samir

    2015-09-01

    Vegetative insecticidal proteins (Vips) secreted by some isolates of Bacillus thuringiensis show activity against insects and are regarded as insecticides against pests. A number of B. thuringiensis strains harbouring vip3A genes were isolated from different sources and identified by using a PCR based approach. The isolates with the highest insecticidal activity were indicated in screening tests, and their vip genes were cloned and sequenced. The analysis revealed two polymorphic Vip protein forms, which were classified as Vip3Aa58 and Vip3Aa59. After expression of the vip genes, the proteins were isolated and characterized. The activity of both toxins was estimated against economically important lepidopteran pests of woodlands (Dendrolimus pini), orchards (Cydia pomonella) and field crops (Spodoptera exigua). Vip3Aa58 and Vip3Aa59 were highly toxic and their potency surpassed those of many Cry proteins used in commercial bioinsecticides. Vip3Aa59 revealed similar larvicidal activity as Vip3Aa58 against S. exigua and C. pomonella. Despite 98% similarity of amino acid sequences of both proteins, Vip3Aa59 was significantly more active against D. pini. Additionally the effect of proteolytic activation of Vip58Aa and Vip3Aa59 on toxicity of D. pini and S. exigua was studied. Both Vip3Aa proteins did not show any activity against Tenebrio molitor (Coleoptera) larvae. The results suggest that the Vip3Aa58 and Vip3Aa59 toxins might be useful for controlling populations of insect pests of crops and forests. Copyright © 2015 Elsevier Inc. All rights reserved.

  2. Efficacy of Controlled Atmosphere Treatments to Manage Arthropod Pests of Dry-Cured Hams

    PubMed Central

    Hasan, Md. Mahbub; Aikins, Michael J.; Schilling, Wes; Phillips, Thomas W.

    2016-01-01

    Research here explored the use of controlled atmospheres (CA) for managing arthropod pests that infest dry-cured hams. Experiments were conducted with low oxygen (O2) achieved with low pressure under a vacuum, high carbon dioxide (CO2), and ozone (O3). Results showed that both low O2 and high CO2 levels required exposures up to 144 h to kill 100% of all stages of red-legged ham beetle, Necrobia rufipes (De Geer) (Coleoptera: Cleridae) and ham mite Tyrophagus putrescentiae (Schrank) (Sarcoptiformes: Acaridae) at 23 °C. In addition, both low O2 and high CO2 had no significant mortality against the ham beetle and ham mites at short exposures ranging from 12 to 48 h. Ham beetles were more tolerant than ham mites to an atmosphere of 75.1% CO2 and low pressure of 25 mm Hg, which imposed an atmosphere estimated at 0.9% O2. Both low O2 and high CO2 trials indicated that the egg stages of both species were more tolerant than other stages tested, but N. rufipes eggs and pupae were more susceptible than larvae and adults to high concentration ozone treatments. The results indicate that O3 has potential to control ham beetles and ham mites, particularly at ≈166 ppm in just a 24 h exposure period, but O3 is known from other work to have poor penetration ability, thus it may be more difficult to apply effectively than low O2 or high CO2. would be. CA treatment for arthropod pests of dry-cured hams show promise as components of integrated pest management programs after methyl bromide is no longer available for use. PMID:27598209

  3. [Cockroaches and co. The role of health pests as allergen source].

    PubMed

    Raulf, M; Sander, I; Gonnissen, D; Zahradnik, E; Brüning, T

    2014-05-01

    In most of the cases health pests are carriers of pathogens or parasites which have a negative impact on human health or affect the health of other mammals. What is lesser known is that they can also act as allergens. Most of the health pests in this sense belong to the arthropods, such as cockroaches (Blattaria), mosquitos (Culiciformia), lice (Pediculus humanus corporis), fleas (Siphonaptera) and ticks (Argasidae). In the group of vertebrates rats (Rattus norvegicus and Rattus rattus), house mice (Mus musculus) and pigeons (Columba livia domestica) are also classified as health pests. Also storage pests which are not carriers of pathogens can induce secondary infestation with hygiene pests or molds and have an underestimated impact on human health. In this article selected examples of health pests and also storage pests as an allergen source are described, taking into account the sensitization prevalence and identified single allergens.

  4. The Case of the Wild House Mouse. Urban Pest Management. Teaching Environmental Living Skills to Elementary Students.

    ERIC Educational Resources Information Center

    Cowles, Kathleen Letcher

    Integrated Pest Management (IPM), a decision-making approach to pest control, is designed to help individuals decide if pest suppression treatments are necessary, when they should be initiated, where they should be applied, and what strategy and mix of tactics to use. IPM combines a variety of approaches with which to manage pests. These include…

  5. Diet of generalist predators reflects effects of cropping period and farming system on extra- and intraguild prey.

    PubMed

    Roubinet, Eve; Birkhofer, Klaus; Malsher, Gerard; Staudacher, Karin; Ekbom, Barbara; Traugott, Michael; Jonsson, Mattias

    2017-06-01

    The suppression of agricultural pests by natural enemies, including generalist arthropod predators, is an economically important regulating ecosystem service. Besides pests, generalist predators may also consume non-pest extraguild and intraguild prey, which can affect their impact on pest populations. This may either reduce the impact of generalist predators on pest populations, because they are diverted from pest predation, or increase it, as it helps them survive periods of low pest availability. However, the availability of pest prey and alternative, non-pest prey can vary over the crop growing season and between farming systems, potentially affecting predator-prey interactions and the levels of biological control. We have limited information about how farming systems and environmental variation over the crop growing season influence predator diets. This limits our ability to predict the importance of generalist predators as natural enemies of agricultural pests. Here we utilize molecular gut content analyses to assess detection frequencies of extra- and intraguild prey DNA in generalist predator communities in replicated organically and conventionally managed cereal fields at two key periods of the cropping season for aphid biological control. This is done in order to understand how farming system, crop season, prey availability and predator community composition determine the composition of predator diets. Aphid pests and decomposers (springtails) were equally important prey for generalist predators early in the growing season. Later in the season, the importance of aphid prey increased with increasing aphid densities while springtail predation rates were positively correlated to abundance of this prey at both early and late crop growth stages. Intraguild predation was unidirectional: carabids fed on spiders, whereas spiders rarely fed on carabids. Carabids had higher detection frequencies for the two most common spider families in organically compared to conventionally managed fields. Our study documents that predation by generalist predator communities on aphid pests increases with pest numbers independently of their generally widespread consumption of alternative, non-pest prey. Therefore, conservation strategies in agricultural fields could promote biological control services by promoting high levels of alternative non-pest prey for generalist predator communities. © 2017 by the Ecological Society of America.

  6. 7 CFR 319.40-11 - Plant pest risk assessment standards.

    Code of Federal Regulations, 2011 CFR

    2011-01-01

    ... Unmanufactured Wood Articles § 319.40-11 Plant pest risk assessment standards. When evaluating a request to... found on the bark; (ii) Plant pests found under the bark; and (iii) Plant pests found in the wood. (2...

  7. 7 CFR 319.40-11 - Plant pest risk assessment standards.

    Code of Federal Regulations, 2010 CFR

    2010-01-01

    ... Unmanufactured Wood Articles § 319.40-11 Plant pest risk assessment standards. When evaluating a request to... found on the bark; (ii) Plant pests found under the bark; and (iii) Plant pests found in the wood. (2...

  8. Current and anticipated uses of thermal hydraulic codes in Korea

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Kim, Kyung-Doo; Chang, Won-Pyo

    1997-07-01

    In Korea, the current uses of thermal hydraulic codes are categorized into 3 areas. The first application is in designing both nuclear fuel and NSSS. The codes have usually been introduced based on the technology transfer programs agreed between KAERI and the foreign vendors. Another area is in the supporting of the plant operations and licensing by the utility. The third category is research purposes. In this area assessments and some applications to the safety issue resolutions are major activities using the best estimate thermal hydraulic codes such as RELAP5/MOD3 and CATHARE2. Recently KEPCO plans to couple thermal hydraulic codesmore » with a neutronics code for the design of the evolutionary type reactor by 2004. KAERI also plans to develop its own best estimate thermal hydraulic code, however, application range is different from KEPCO developing code. Considering these activities, it is anticipated that use of the best estimate hydraulic analysis code developed in Korea may be possible in the area of safety evaluation within 10 years.« less

  9. Molecular genetics and genomics generate new insights into invertebrate pest invasions.

    PubMed

    Kirk, Heather; Dorn, Silvia; Mazzi, Dominique

    2013-07-01

    Invertebrate pest invasions and outbreaks are associated with high social, economic, and ecological costs, and their significance will intensify with an increasing pressure on agricultural productivity as a result of human population growth and climate change. New molecular genetic and genomic techniques are available and accessible, but have been grossly underutilized in studies of invertebrate pest invasions, despite that they are useful tools for applied pest management and for understanding fundamental features of pest invasions including pest population demographics and adaptation of pests to novel and/or changing environments. Here, we review current applications of molecular genetics and genomics in the study of invertebrate pest invasions and outbreaks, and we highlight shortcomings from the current body of research. We then discuss recent conceptual and methodological advances in the areas of molecular genetics/genomics and data analysis, and we highlight how these advances will further our understanding of the demographic, ecological, and evolutionary features of invertebrate pest invasions. We are now well equipped to use molecular data to understand invertebrate dispersal and adaptation, and this knowledge has valuable applications in agriculture at a time when these are critically required.

  10. Landscape changes have greater effects than climate changes on six insect pests in China.

    PubMed

    Zhao, Zihua; Sandhu, Hardev S; Ouyang, Fang; Ge, Feng

    2016-06-01

    In recent years, global changes are the major causes of frequent, widespread outbreaks of pests in mosaic landscapes, which have received substantial attention worldwide. We collected data on global changes (landscape and climate) and economic damage caused by six main insect pests during 1951-2010 in China. Landscape changes had significant effects on all six insect pests. Pest damage increased significantly with increasing arable land area in agricultural landscapes. However, climate changes had no effect on damage caused by pests, except for the rice leaf roller (Cnaphalocrocis medinalis Guenee) and armyworm (Mythimna separate (Walker)), which caused less damage to crops with increasing mean temperature. Our results indicate that there is slight evidence of possible offset effects of climate changes on the increasing damage from these two agricultural pests. Landscape changes have caused serious outbreaks of several species, which suggests the possibility of the use of landscape design for the control of pest populations through habitat rearrangement. Landscape manipulation may be used as a green method to achieve sustainable pest management with minimal use of insecticides and herbicides.

  11. The Management of Insect Pests in Australian Cotton: An Evolving Story.

    PubMed

    Wilson, Lewis J; Whitehouse, Mary E A; Herron, Grant A

    2018-01-07

    The Australian cotton industry progressively embraced integrated pest management (IPM) to alleviate escalating insecticide resistance issues. A systems IPM approach was used with core principles that were built around pest ecology/biology and insecticide resistance management; together, these were integrated into a flexible, year-round approach that facilitated easy incorporation of new science, strategies, and pests. The approach emphasized both strategic and tactical elements to reduce pest abundance and rationalize decisions about pest control, with insecticides as a last resort. Industry involvement in developing the approach was vital to embedding IPM within the farming system. Adoption of IPM was facilitated by the introduction of Bt cotton, availability of selective insecticides, economic validation, and an industry-wide extension campaign. Surveys indicate IPM is now embedded in industry, confirming the effectiveness of an industry-led, backed-by-science approach. The amount of insecticide active ingredient applied per hectare against pests has also declined dramatically. Though challenges remain, pest management has transitioned from reactively attempting to eradicate pests from fields to proactively managing them year-round, considering the farm within the wider landscape.

  12. Noise Estimation and Adaptive Encoding for Asymmetric Quantum Error Correcting Codes

    NASA Astrophysics Data System (ADS)

    Florjanczyk, Jan; Brun, Todd; CenterQuantum Information Science; Technology Team

    We present a technique that improves the performance of asymmetric quantum error correcting codes in the presence of biased qubit noise channels. Our study is motivated by considering what useful information can be learned from the statistics of syndrome measurements in stabilizer quantum error correcting codes (QECC). We consider the case of a qubit dephasing channel where the dephasing axis is unknown and time-varying. We are able to estimate the dephasing angle from the statistics of the standard syndrome measurements used in stabilizer QECC's. We use this estimate to rotate the computational basis of the code in such a way that the most likely type of error is covered by the highest distance of the asymmetric code. In particular, we use the [ [ 15 , 1 , 3 ] ] shortened Reed-Muller code which can correct one phase-flip error but up to three bit-flip errors. In our simulations, we tune the computational basis to match the estimated dephasing axis which in turn leads to a decrease in the probability of a phase-flip error. With a sufficiently accurate estimate of the dephasing axis, our memory's effective error is dominated by the much lower probability of four bit-flips. Aro MURI Grant No. W911NF-11-1-0268.

  13. Causes of Death Data in the Global Burden of Disease Estimates for Ischemic and Hemorrhagic Stroke.

    PubMed

    Truelsen, Thomas; Krarup, Lars-Henrik; Iversen, Helle K; Mensah, George A; Feigin, Valery L; Sposato, Luciano A; Naghavi, Mohsen

    2015-01-01

    Stroke mortality estimates in the Global Burden of Disease (GBD) study are based on routine mortality statistics and redistribution of ill-defined codes that cannot be a cause of death, the so-called 'garbage codes' (GCs). This study describes the contribution of these codes to stroke mortality estimates. All available mortality data were compiled and non-specific cause codes were redistributed based on literature review and statistical methods. Ill-defined codes were redistributed to their specific cause of disease by age, sex, country and year. The reassignment was done based on the International Classification of Diseases and the pathology behind each code by checking multiple causes of death and literature review. Unspecified stroke and primary and secondary hypertension are leading contributing 'GCs' to stroke mortality estimates for hemorrhagic stroke (HS) and ischemic stroke (IS). There were marked differences in the fraction of death assigned to IS and HS for unspecified stroke and hypertension between GBD regions and between age groups. A large proportion of stroke fatalities are derived from the redistribution of 'unspecified stroke' and 'hypertension' with marked regional differences. Future advancements in stroke certification, data collections and statistical analyses may improve the estimation of the global stroke burden. © 2015 S. Karger AG, Basel.

  14. Coded DS-CDMA Systems with Iterative Channel Estimation and no Pilot Symbols

    DTIC Science & Technology

    2010-08-01

    ar X iv :1 00 8. 31 96 v1 [ cs .I T ] 1 9 A ug 2 01 0 1 Coded DS - CDMA Systems with Iterative Channel Estimation and no Pilot Symbols Don...sequence code-division multiple-access ( DS - CDMA ) systems with quadriphase-shift keying in which channel estimation, coherent demodulation, and decoding...amplitude, phase, and the interference power spectral density (PSD) due to the combined interference and thermal noise is proposed for DS - CDMA systems

  15. Forest Pest Control. Sale Publication 4072.

    ERIC Educational Resources Information Center

    Stimmann, M. W., Ed.

    The forest pests discussed in this guide are weeds, insects, diseases, and vertebrates. The guide gives information about types of forests, characteristics of common forest pests, pest control methods, pesticides and application equipment used in forestry, and environmental and human hazards. (Author/BB)

  16. Microbial control of arthropod pests of tropical tree fruits.

    PubMed

    Dolinski, Claudia; Lacey, Lawrence A

    2007-01-01

    A multitude of insects and mites attack fruit crops throughout the tropics. The traditional method for controlling most of these pests is the application of chemical pesticides. Growing concern on the negative environmental effects has encouraged the development of alternatives. Inundatively and inoculatively applied microbial control agents (virus, bacteria, fungi, and entomopathogenic nematodes) have been developed as alternative control methods of a wide variety of arthropods including tropical fruit pests. The majority of the research and applications in tropical fruit agroecosystems has been conducted in citrus, banana, coconut, and mango. Successful microbial control initiatives of citrus pests and mites have been reported. Microbial control of arthropod pests of banana includes banana weevil, Cosmopolites sordidus Germar (Coleoptera: Curculionidae) (with EPNs and fungi) among others Oryctes rhinoceros (L.) is one of the most important pests of coconut and one of the most successful uses of non-occluded virus for classical biological control. Key pests of mango that have been controlled with microbial control agents include fruit flies (Diptera: Tephritidae) (with EPNs and fungi), and other pests. Also successful is the microbial control of arthropod pests of guava, papaya and pineapple. The challenge towards a broader application of entomopathogens is the development of successful combinations of entomopathogens, predators, and parasitoids along with other interventions to produce effective and sustainable pest management.

  17. Information on Pests in Schools and Their Control

    EPA Pesticide Factsheets

    Pests such as insects, rodents, fungi, and weeds can affect the school environment and the people who work and learn there. These pests can cause human health problems, and structural and plant damage. Know what pests you face before deciding on control.

  18. Insecticides for suppression of Nylanderia fulva

    USDA-ARS?s Scientific Manuscript database

    Nylanderia fulva (Mayr) is an invasive ant that is a serious pest in the southern United States. Pest control operators and homeowners are challenged to manage pest populations below acceptable thresholds. Contact and bait insecticides are key components of an Integrated Pest Management (IPM) strate...

  19. Effects of crop species richness on pest-natural enemy systems based on an experimental model system using a microlandscape.

    PubMed

    Zhao, ZiHua; Shi, PeiJian; Men, XingYuan; Ouyang, Fang; Ge, Feng

    2013-08-01

    The relationship between crop richness and predator-prey interactions as they relate to pest-natural enemy systems is a very important topic in ecology and greatly affects biological control services. The effects of crop arrangement on predator-prey interactions have received much attention as the basis for pest population management. To explore the internal mechanisms and factors driving the relationship between crop richness and pest population management, we designed an experimental model system of a microlandscape that included 50 plots and five treatments. Each treatment had 10 repetitions in each year from 2007 to 2010. The results showed that the biomass of pests and their natural enemies increased with increasing crop biomass and decreased with decreasing crop biomass; however, the effects of plant biomass on the pest and natural enemy biomass were not significant. The relationship between adjacent trophic levels was significant (such as pests and their natural enemies or crops and pests), whereas non-adjacent trophic levels (crops and natural enemies) did not significantly interact with each other. The ratio of natural enemy/pest biomass was the highest in the areas of four crop species that had the best biological control service. Having either low or high crop species richness did not enhance the pest population management service and lead to loss of biological control. Although the resource concentration hypothesis was not well supported by our results, high crop species richness could suppress the pest population, indicating that crop species richness could enhance biological control services. These results could be applied in habitat management aimed at biological control, provide the theoretical basis for agricultural landscape design, and also suggest new methods for integrated pest management.

  20. Enhancing Integrated Pest Management in GM Cotton Systems Using Host Plant Resistance

    PubMed Central

    Trapero, Carlos; Wilson, Iain W.; Stiller, Warwick N.; Wilson, Lewis J.

    2016-01-01

    Cotton has lost many ancestral defensive traits against key invertebrate pests. This is suggested by the levels of resistance to some pests found in wild cotton genotypes as well as in cultivated landraces and is a result of domestication and a long history of targeted breeding for yield and fiber quality, along with the capacity to control pests with pesticides. Genetic modification (GM) allowed integration of toxins from a bacteria into cotton to control key Lepidopteran pests. Since the mid-1990s, use of GM cotton cultivars has greatly reduced the amount of pesticides used in many cotton systems. However, pests not controlled by the GM traits have usually emerged as problems, especially the sucking bug complex. Control of this complex with pesticides often causes a reduction in beneficial invertebrate populations, allowing other secondary pests to increase rapidly and require control. Control of both sucking bug complex and secondary pests is problematic due to the cost of pesticides and/or high risk of selecting for pesticide resistance. Deployment of host plant resistance (HPR) provides an opportunity to manage these issues in GM cotton systems. Cotton cultivars resistant to the sucking bug complex and/or secondary pests would require fewer pesticide applications, reducing costs and risks to beneficial invertebrate populations and pesticide resistance. Incorporation of HPR traits into elite cotton cultivars with high yield and fiber quality offers the potential to further reduce pesticide use and increase the durability of pest management in GM cotton systems. We review the challenges that the identification and use of HPR against invertebrate pests brings to cotton breeding. We explore sources of resistance to the sucking bug complex and secondary pests, the mechanisms that control them and the approaches to incorporate these defense traits to commercial cultivars. PMID:27148323

  1. Seasonal Population Dynamics of Three Potato Pests in Washington State.

    PubMed

    D'Auria, Elizabeth M; Wohleb, Carrie H; Waters, Timothy D; Crowder, David W

    2016-08-01

    Pest phenology models allow producers to anticipate pest outbreaks and deploy integrated pest management (IPM) strategies. Phenology models are particularly useful for cropping systems with multiple economically damaging pests throughout a season. Potato (Solanum tuberosum L.) crops of Washington State, USA, are attacked by many insect pests including the potato tuberworm (Phthorimaea operculella Zeller), the beet leafhopper (Circulifer tenellus Baker), and the green peach aphid (Myzus persicae Sulzer). Each of these pests directly damages potato foliage or tubers; C. tenellus and M. persicae also transmit pathogens that can drastically reduce potato yields. We monitored the seasonal population dynamics of these pests by conducting weekly sampling on a network of commercial farms from 2007 to 2014. Using these data, we developed phenology models to characterize the seasonal population dynamics of each pest based on accumulated degree-days (DD). All three pests exhibited consistent population dynamics across seasons that were mediated by temperature. Of the three pests, C. tenellus was generally the first detected in potato crops, with 90% of adults captured by 936 DD. In contrast, populations of P. operculella and M. persicae built up more slowly over the course of the season, with 90% cumulative catch by 1,590 and 2,634 DD, respectively. Understanding these seasonal patterns could help potato producers plan their IPM strategies while allowing them to move away from calendar-based applications of insecticides. More broadly, our results show how long-term monitoring studies that explore dynamics of multiple pest species can aid in developing IPM strategies in crop systems. © The Authors 2016. Published by Oxford University Press on behalf of Entomological Society of America. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

  2. Pesticide Applicator Training Manual, Category 8A: General Public Health Pest Control for New Jersey. A Training Program for the Certification of Commercial Pesticide Applicators, and Study Questions.

    ERIC Educational Resources Information Center

    Schulze, Terry L.; Kriner, Ray R.

    This training manual provides information needed to meet the minimum EPA standards for certification as a commercial applicator of pesticides in the public health pest control category. The text discusses invertebrate pests such as cockroaches, lice, fleas, and mites, vertebrate pests; and plant pests such as poison ivy and ragweed. A study guide…

  3. Pest control of aphids depends on landscape complexity and natural enemy interactions

    PubMed Central

    Reineking, Björn; Seo, Bumsuk; Steffan-Dewenter, Ingolf

    2015-01-01

    Aphids are a major concern in agricultural crops worldwide, and control by natural enemies is an essential component of the ecological intensification of agriculture. Although the complexity of agricultural landscapes is known to influence natural enemies of pests, few studies have measured the degree of pest control by different enemy guilds across gradients in landscape complexity. Here, we use multiple natural-enemy exclosures replicated in 18 fields across a gradient in landscape complexity to investigate (1) the strength of natural pest control across landscapes, measured as the difference between pest pressure in the presence and in the absence of natural enemies; (2) the differential contributions of natural enemy guilds to pest control, and the nature of their interactions across landscapes. We show that natural pest control of aphids increased up to six-fold from simple to complex landscapes. In the absence of pest control, aphid population growth was higher in complex than simple landscapes, but was reduced by natural enemies to similar growth rates across all landscapes. The effects of enemy guilds were landscape-dependent. Particularly in complex landscapes, total pest control was supplied by the combined contribution of flying insects and ground-dwellers. Birds had little overall impact on aphid control. Despite evidence for intraguild predation of flying insects by ground-dwellers and birds, the overall effect of enemy guilds on aphid control was complementary. Understanding pest control services at large spatial scales is critical to increase the success of ecological intensification schemes. Our results suggest that, where aphids are the main pest of concern, interactions between natural enemies are largely complementary and lead to a strongly positive effect of landscape complexity on pest control. Increasing the availability of seminatural habitats in agricultural landscapes may thus benefit not only natural enemies, but also the effectiveness of aphid natural pest control. PMID:26734497

  4. Pest control of aphids depends on landscape complexity and natural enemy interactions.

    PubMed

    Martin, Emily A; Reineking, Björn; Seo, Bumsuk; Steffan-Dewenter, Ingolf

    2015-01-01

    Aphids are a major concern in agricultural crops worldwide, and control by natural enemies is an essential component of the ecological intensification of agriculture. Although the complexity of agricultural landscapes is known to influence natural enemies of pests, few studies have measured the degree of pest control by different enemy guilds across gradients in landscape complexity. Here, we use multiple natural-enemy exclosures replicated in 18 fields across a gradient in landscape complexity to investigate (1) the strength of natural pest control across landscapes, measured as the difference between pest pressure in the presence and in the absence of natural enemies; (2) the differential contributions of natural enemy guilds to pest control, and the nature of their interactions across landscapes. We show that natural pest control of aphids increased up to six-fold from simple to complex landscapes. In the absence of pest control, aphid population growth was higher in complex than simple landscapes, but was reduced by natural enemies to similar growth rates across all landscapes. The effects of enemy guilds were landscape-dependent. Particularly in complex landscapes, total pest control was supplied by the combined contribution of flying insects and ground-dwellers. Birds had little overall impact on aphid control. Despite evidence for intraguild predation of flying insects by ground-dwellers and birds, the overall effect of enemy guilds on aphid control was complementary. Understanding pest control services at large spatial scales is critical to increase the success of ecological intensification schemes. Our results suggest that, where aphids are the main pest of concern, interactions between natural enemies are largely complementary and lead to a strongly positive effect of landscape complexity on pest control. Increasing the availability of seminatural habitats in agricultural landscapes may thus benefit not only natural enemies, but also the effectiveness of aphid natural pest control.

  5. Is tree loss associated with cardiovascular-disease risk in the Women's Health Initiative? A natural experiment

    Treesearch

    Geoffrey H. Donovan; Yvonne L. Michael; Demetrios Gatziolis; Jeffrey P. Prestemon; Eric A. Whitsel

    2015-01-01

    Data from the Women's Health Initiative were used to quantify the relationship between the loss of trees to an invasive forest pest—the emerald ash borer—and cardiovascular disease. We estimated semi- parametric Cox proportional hazards model of time to cardiovascular disease, adjusting for confounders. We defined the incidence of cardiovascular disease as acute...

  6. Isolation and characterization of an endophytic fungal strain with potent antimicrobial and termiticidal activities from Port-Orford-Cedar

    Treesearch

    L. Sun; C.-Y. Hse; T. Shupe; M. Sun; X. Wang; K. Zhao

    2015-01-01

    Termites are responsible for an estimated US$1 billion annually in property damage, repairs, pest control, and prevention. There is an urgent need of finding a better alternative way to control and prevent termites. Port-Orford-Cedar (POC) has been known to have significant levels of natural durability and termiticidal activities due to its extractive contents. In this...

  7. Inferential and forward projection modeling to evaluate options for controlling invasive mammals on islands.

    PubMed

    Anderson, D P; McMurtrie, P; Edge, K-A; Baxter, P W J; Byrom, A E

    2016-12-01

    Successful pest-mammal eradications from remote islands have resulted in important biodiversity benefits. Near-shore islands can also serve as refuges for native biota but require ongoing effort to maintain low-pest or pest-free status. Three management options are available in the presence of reinvasion risk: (1) control-to-zero density, in which immigration may occur but reinvaders are removed; (2) sustained population suppression (to relatively low numbers); or (3) no action. Biodiversity benefits can result from options one and two. The management challenge is to make evidence-based decisions on the selection of an appropriate objective and to identify a financially feasible control strategy that has a high probability of success. This requires understanding the pest species population dynamics and how it will respond to a range of potential management strategies, each with an associated financial cost. We developed a two-stage modeling approach that consisted of (1) Bayesian inferential modeling to estimate parameters for a model of pest population dynamics and control, and (2) a forward projection model to simulate a range of plausible management scenarios and quantify the probability of obtaining zero density within four years. We applied the model to an ongoing, six-year trapping program to control stoats (Mustela erminea) on Resolution Island, New Zealand. Zero density has not yet been achieved. Results demonstrate that management objectives were impeded by a combination of a highly fecund population, insufficient trap attractiveness, and a substantial proportion of the population that did not enter traps. Immigration is known to occur because the founding population arrived on the island by swimming from the mainland. However, immigration rate during this study was indistinguishable from zero. The forward projection modeling showed that control-to-zero density was feasible but required greater than a two-fold budget increase to intensify the trapping rate relative to population growth. The two-stage modeling provides the foundation for a management program in which broad-scale trials of additional trapping effort or improved trap lures would test model predictions and increase our understanding of system dynamics. © 2016 by the Ecological Society of America.

  8. Research investment implications of shifts in the global geography of wheat stripe rust.

    PubMed

    Beddow, Jason M; Pardey, Philip G; Chai, Yuan; Hurley, Terrance M; Kriticos, Darren J; Braun, Hans-Joachim; Park, Robert F; Cuddy, William S; Yonow, Tania

    2015-09-14

    Breeding new crop varieties with resistance to the biotic stresses that undermine crop yields is tantamount to increasing the amount and quality of biological capital in agriculture. However, the success of genes that confer resistance to pests induces a co-evolutionary response that depreciates the biological capital embodied in the crop, as pests evolve the capacity to overcome the crop's new defences. Thus, simply maintaining this biological capital, and the beneficial production and economic outcomes it bestows, requires continual reinvestment in new crop defences. Here we use observed and modelled data on stripe rust occurrence to gauge changes in the geographic spread of the disease over recent decades. We document a significant increase in the spread of stripe rust since 1960, with 88% of the world's wheat production now susceptible to infection. Using a probabilistic Monte Carlo simulation model we estimate that 5.47 million tonnes of wheat are lost to the pathogen each year, equivalent to a loss of US$979 million per year. Comparing the cost of developing stripe-rust-resistant varieties of wheat with the cost of stripe-rust-induced yield losses, we estimate that a sustained annual research investment of at least US$32 million into stripe rust resistance is economically justified.

  9. Challenges in devising economic spray thresholds for a major pest of Australian canola, the redlegged earth mite (Halotydeus destructor).

    PubMed

    Arthur, Aston L; Hoffmann, Ary A; Umina, Paul A

    2015-10-01

    A key component for spray decision-making in IPM programmes is the establishment of economic injury levels (EILs) and economic thresholds (ETs). We aimed to establish an EIL for the redlegged earth mite (Halotydeus destructor Tucker) on canola. Complex interactions between mite numbers, feeding damage and plant recovery were found, highlighting the challenges in linking H. destructor numbers to yield. A guide of 10 mites plant(-1) was established at the first-true-leaf stage; however, simple relationships were not evident at other crop development stages, making it difficult to establish reliable EILs based on mite number. Yield was, however, strongly associated with plant damage and plant densities, reflecting the impact of mite feeding damage and indicating a plant-based alternative for establishing thresholds for H. destructor. Drawing on data from multiple field trials, we show that plant densities below 30-40 plants m(-2) could be used as a proxy for mite damage when reliable estimates of mite densities are not possible. This plant-based threshold provides a practical tool that avoids the difficulties of accurately estimating mite densities. The approach may be applicable to other situations where production conditions are unpredictable and interactions between pests and plant hosts are complex. © 2015 Society of Chemical Industry.

  10. Spider-Venom Peptides as Bioinsecticides

    PubMed Central

    Windley, Monique J.; Herzig, Volker; Dziemborowicz, Sławomir A.; Hardy, Margaret C.; King, Glenn F.; Nicholson, Graham M.

    2012-01-01

    Over 10,000 arthropod species are currently considered to be pest organisms. They are estimated to contribute to the destruction of ~14% of the world’s annual crop production and transmit many pathogens. Presently, arthropod pests of agricultural and health significance are controlled predominantly through the use of chemical insecticides. Unfortunately, the widespread use of these agrochemicals has resulted in genetic selection pressure that has led to the development of insecticide-resistant arthropods, as well as concerns over human health and the environment. Bioinsecticides represent a new generation of insecticides that utilise organisms or their derivatives (e.g., transgenic plants, recombinant baculoviruses, toxin-fusion proteins and peptidomimetics) and show promise as environmentally-friendly alternatives to conventional agrochemicals. Spider-venom peptides are now being investigated as potential sources of bioinsecticides. With an estimated 100,000 species, spiders are one of the most successful arthropod predators. Their venom has proven to be a rich source of hyperstable insecticidal mini-proteins that cause insect paralysis or lethality through the modulation of ion channels, receptors and enzymes. Many newly characterized insecticidal spider toxins target novel sites in insects. Here we review the structure and pharmacology of these toxins and discuss the potential of this vast peptide library for the discovery of novel bioinsecticides. PMID:22741062

  11. Inferring modes of colonization for pest species using heterozygosity comparisons and a shared-allele test.

    PubMed Central

    Sved, J A; Yu, H; Dominiak, B; Gilchrist, A S

    2003-01-01

    Long-range dispersal of a species may involve either a single long-distance movement from a core population or spreading via unobserved intermediate populations. Where the new populations originate as small propagules, genetic drift may be extreme and gene frequency or assignment methods may not prove useful in determining the relation between the core population and outbreak samples. We describe computationally simple resampling methods for use in this situation to distinguish between the different modes of dispersal. First, estimates of heterozygosity can be used to test for direct sampling from the core population and to estimate the effective size of intermediate populations. Second, a test of sharing of alleles, particularly rare alleles, can show whether outbreaks are related to each other rather than arriving as independent samples from the core population. The shared-allele statistic also serves as a genetic distance measure that is appropriate for small samples. These methods were applied to data on a fruit fly pest species, Bactrocera tryoni, which is quarantined from some horticultural areas in Australia. We concluded that the outbreaks in the quarantine zone came from a heterogeneous set of genetically differentiated populations, possibly ones that overwinter in the vicinity of the quarantine zone. PMID:12618417

  12. Framing the issues of resistance management in soybean

    USDA-ARS?s Scientific Manuscript database

    The soybean insect-pest complex consists of both long-established and new invasive pests. Management of these pests has been achieved by various means, but often relies heavily on the application of insecticides and the development of insect-resistant soybean varieties. Pest management practitione...

  13. Corn insect pests

    USDA-ARS?s Scientific Manuscript database

    Historically, the major corn insect pests in South Dakota have been the larvae of corn rootworms (northern and western), European corn borer, and black cutworm. Bt-corn hybrids are effective against most of these pests. However, there are also minor or sporadic pests of corn in South Dakota includin...

  14. Sampling plans, selective insecticides and sustainability: the case for IPM as 'informed pest management'.

    PubMed

    Castle, Steven; Naranjo, Steven E

    2009-12-01

    Integrated Pest Management (IPM) is considered the central paradigm of insect pest management and is often characterized as a comprehensive use of multiple control tactics to reduce pest status while minimizing economic and environmental costs. As the principal precursor of IPM, the integrated control concept formulated the economic theory behind pest management decisions and specified an applied methodology for carrying out pest control. Sampling, economic thresholds and selective insecticides were three of the critical elements of that methodology and are now considered indispensable to the goals of IPM. We examine each of these elements in the context of contemporaneous information as well as accumulated experience and knowledge required for their skillful implementation in an IPM program. We conclude that while IPM is principally about integrating control tactics into an effective and sustainable approach to pest control, this overarching goal can only be achieved through well-trained practitioners, knowledgeable of the tenets conceived in the integrated control concept that ultimately yield informed pest management. (c) 2009 Society of Chemical Industry.

  15. [Dynamic model of seasonal breeding rodent pest population controlled with short-acting sterilant].

    PubMed

    Liu, Han-wu; Jin, Zhen; Zhang, Feng-qin; Li, Qiu-ying

    2013-04-01

    Rodent pests bring great damage to human beings, while rodenticide and sterilant can be used to control the pests. After ingesting sterilant, rodent pests lose their fertility, but in some cases, the sterile individuals may gain their fertility again, produce offspring, and enlarge population size. In this paper, the dynamic models of rodent pest population under lethal control and shortacting contraception control were formulated, and, with the prerequisite of the seasonal breeding of rodent pest population, the models were used to regularly analyze their behaviors and the effects of the contraception rate, lethal rate, control interval, and sterilant valid period on the dynamics of the pest population. The results showed that larger contraception rate and lethal rate and shorter control interval could have better control effect, making the controlled population become smaller and even died out. Short-acting sterilant limited the control effect. At the later period of breeding season, the rodent pest population controlled with short-acting sterilant would have a weak recovery.

  16. Options for pest and disease control in organic pecan

    USDA-ARS?s Scientific Manuscript database

    Although organic pecans typically command a higher wholesale and retail price, their production presents a unique set of challenges. Among these are issues of pest and disease management - it is not simply a modification of the conventional, pest and disease management paradigm. Despite these pest ...

  17. Introduction to 2009 Symposium on Alternative Methods of Controlling Pests and Diseases

    USDA-ARS?s Scientific Manuscript database

    Numerous pests and diseases limit potato productivity, and control of weeds, insects and pathogens remains a costly part of potato production. Although conventional agrichemical pest control is amazingly effective, interest in non-synthetic chemical and integrated methods of pest management is drive...

  18. 33 CFR 274.6 - Division/district pest control programs.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... 33 Navigation and Navigable Waters 3 2013-07-01 2013-07-01 false Division/district pest control..., DEPARTMENT OF DEFENSE PEST CONTROL PROGRAM FOR CIVIL WORKS PROJECTS Project Operation § 274.6 Division/district pest control programs. (a) Guides. Referenced technical manuals, and Engineer Circulars issued...

  19. 33 CFR 274.6 - Division/district pest control programs.

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ... 33 Navigation and Navigable Waters 3 2012-07-01 2012-07-01 false Division/district pest control..., DEPARTMENT OF DEFENSE PEST CONTROL PROGRAM FOR CIVIL WORKS PROJECTS Project Operation § 274.6 Division/district pest control programs. (a) Guides. Referenced technical manuals, and Engineer Circulars issued...

  20. 33 CFR 274.6 - Division/district pest control programs.

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ... 33 Navigation and Navigable Waters 3 2014-07-01 2014-07-01 false Division/district pest control..., DEPARTMENT OF DEFENSE PEST CONTROL PROGRAM FOR CIVIL WORKS PROJECTS Project Operation § 274.6 Division/district pest control programs. (a) Guides. Referenced technical manuals, and Engineer Circulars issued...

  1. 33 CFR 274.6 - Division/district pest control programs.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... 33 Navigation and Navigable Waters 3 2011-07-01 2011-07-01 false Division/district pest control..., DEPARTMENT OF DEFENSE PEST CONTROL PROGRAM FOR CIVIL WORKS PROJECTS Project Operation § 274.6 Division/district pest control programs. (a) Guides. Referenced technical manuals, and Engineer Circulars issued...

  2. Vegetable Crop Pests. MEP 311.

    ERIC Educational Resources Information Center

    Kantzes, James G.; And Others

    As part of a cooperative extension service series by the University of Maryland, this publication introduces the identification and control of common agricultural pests of vegetable crops. The first of the five sections defines "pest" and "weed" and generally introduces different kinds of pests in the categories of insects,…

  3. The ABCs of Non-Toxic Pest Control.

    ERIC Educational Resources Information Center

    Cooper, Susan

    1990-01-01

    Although chemical-intensive pest control methods have proven reasonably effective, a growing awareness of health and environmental risks associated with pesticides has sharpened public interest in safer alternatives. An integrated pest management approach reduces risks from pests while minimizing human exposure and reducing the toxicity of applied…

  4. Urban Pest Management of Ants in California

    USDA-ARS?s Scientific Manuscript database

    Keeping pace with the dynamic and evolving landscape of invasive ants in California presents a formidable challenge to the pest management industry. Pest management professionals (PMPs) are on the frontlines when it comes to battling these exotic ant pests, and are often the first ones to intercept ...

  5. STATEQ: a nonlinear least-squares code for obtaining Martin thermodynamic representations of fluids in the gaseous and dense gaseous regions

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Milora, S. L.

    1976-02-01

    The use of the code NLIN (IBM Share Program No. 1428) to obtain empirical thermodynamic pressure-volume-temperature (P-V-T) relationships for substances in the gaseous and dense gaseous states is described. When sufficient experimental data exist, the code STATEQ will provide least-squares estimates for the 21 parameters of the Martin model. Another code, APPROX, is described which also obtains parameter estimates for the model by making use of the approximate generalized behavior of fluids. Use of the codes is illustrated in obtaining thermodynamic representations for isobutane. (auth)

  6. GPS receiver CODE bias estimation: A comparison of two methods

    NASA Astrophysics Data System (ADS)

    McCaffrey, Anthony M.; Jayachandran, P. T.; Themens, D. R.; Langley, R. B.

    2017-04-01

    The Global Positioning System (GPS) is a valuable tool in the measurement and monitoring of ionospheric total electron content (TEC). To obtain accurate GPS-derived TEC, satellite and receiver hardware biases, known as differential code biases (DCBs), must be estimated and removed. The Center for Orbit Determination in Europe (CODE) provides monthly averages of receiver DCBs for a significant number of stations in the International Global Navigation Satellite Systems Service (IGS) network. A comparison of the monthly receiver DCBs provided by CODE with DCBs estimated using the minimization of standard deviations (MSD) method on both daily and monthly time intervals, is presented. Calibrated TEC obtained using CODE-derived DCBs, is accurate to within 0.74 TEC units (TECU) in differenced slant TEC (sTEC), while calibrated sTEC using MSD-derived DCBs results in an accuracy of 1.48 TECU.

  7. Forest Insect Pest Management and Forest Management in China: An Overview

    NASA Astrophysics Data System (ADS)

    Ji, Lanzhu; Wang, Zhen; Wang, Xiaowei; An, Linli

    2011-12-01

    According to the Seventh National Forest Inventory (2004-2008), China's forests cover an area of 195.45 million ha, or 20.36% of the total land area. China has the most rapidly increasing forest resources in the world. However, China is also a country with serious forest pest problems. There are more than 8,000 species of potential forest pests in China, including insects, plant diseases, rodents and lagomorphs, and hazardous plants. Among them, 300 species are considered as economically or ecologically important, and half of these are serious pests, including 86 species of insects. Forest management and utilization have a considerable influence on the stability and sustainability of forest ecosystems. At the national level, forestry policies always play a major role in forest resource management and forest health protection. In this paper, we present a comprehensive overview of both achievements and challenges in forest management and insect pest control in China. First, we summarize the current status of forest resources and their pests in China. Second, we address the theories, policies, practices and major national actions on forestry and forest insect pest management, including the Engineering Pest Management of China, the National Key Forestry Programs, the Classified Forest Management system, and the Collective Forest Tenure Reform. We analyze and discuss three representative plantations— Eucalyptus, poplar and Masson pine plantations—with respect to their insect diversity, pest problems and pest management measures.

  8. Improving detection probabilities for pests in stored grain.

    PubMed

    Elmouttie, David; Kiermeier, Andreas; Hamilton, Grant

    2010-12-01

    The presence of insects in stored grain is a significant problem for grain farmers, bulk grain handlers and distributors worldwide. Inspection of bulk grain commodities is essential to detect pests and thereby to reduce the risk of their presence in exported goods. It has been well documented that insect pests cluster in response to factors such as microclimatic conditions within bulk grain. Statistical sampling methodologies for grain, however, have typically considered pests and pathogens to be homogeneously distributed throughout grain commodities. In this paper, a sampling methodology is demonstrated that accounts for the heterogeneous distribution of insects in bulk grain. It is shown that failure to account for the heterogeneous distribution of pests may lead to overestimates of the capacity for a sampling programme to detect insects in bulk grain. The results indicate the importance of the proportion of grain that is infested in addition to the density of pests within the infested grain. It is also demonstrated that the probability of detecting pests in bulk grain increases as the number of subsamples increases, even when the total volume or mass of grain sampled remains constant. This study underlines the importance of considering an appropriate biological model when developing sampling methodologies for insect pests. Accounting for a heterogeneous distribution of pests leads to a considerable improvement in the detection of pests over traditional sampling models. Copyright © 2010 Society of Chemical Industry.

  9. Forest insect pest management and forest management in China: an overview.

    PubMed

    Ji, Lanzhu; Wang, Zhen; Wang, Xiaowei; An, Linli

    2011-12-01

    According to the Seventh National Forest Inventory (2004-2008), China's forests cover an area of 195.45 million ha, or 20.36% of the total land area. China has the most rapidly increasing forest resources in the world. However, China is also a country with serious forest pest problems. There are more than 8,000 species of potential forest pests in China, including insects, plant diseases, rodents and lagomorphs, and hazardous plants. Among them, 300 species are considered as economically or ecologically important, and half of these are serious pests, including 86 species of insects. Forest management and utilization have a considerable influence on the stability and sustainability of forest ecosystems. At the national level, forestry policies always play a major role in forest resource management and forest health protection. In this paper, we present a comprehensive overview of both achievements and challenges in forest management and insect pest control in China. First, we summarize the current status of forest resources and their pests in China. Second, we address the theories, policies, practices and major national actions on forestry and forest insect pest management, including the Engineering Pest Management of China, the National Key Forestry Programs, the Classified Forest Management system, and the Collective Forest Tenure Reform. We analyze and discuss three representative plantations-Eucalyptus, poplar and Masson pine plantations-with respect to their insect diversity, pest problems and pest management measures.

  10. Bootstrap imputation with a disease probability model minimized bias from misclassification due to administrative database codes.

    PubMed

    van Walraven, Carl

    2017-04-01

    Diagnostic codes used in administrative databases cause bias due to misclassification of patient disease status. It is unclear which methods minimize this bias. Serum creatinine measures were used to determine severe renal failure status in 50,074 hospitalized patients. The true prevalence of severe renal failure and its association with covariates were measured. These were compared to results for which renal failure status was determined using surrogate measures including the following: (1) diagnostic codes; (2) categorization of probability estimates of renal failure determined from a previously validated model; or (3) bootstrap methods imputation of disease status using model-derived probability estimates. Bias in estimates of severe renal failure prevalence and its association with covariates were minimal when bootstrap methods were used to impute renal failure status from model-based probability estimates. In contrast, biases were extensive when renal failure status was determined using codes or methods in which model-based condition probability was categorized. Bias due to misclassification from inaccurate diagnostic codes can be minimized using bootstrap methods to impute condition status using multivariable model-derived probability estimates. Copyright © 2017 Elsevier Inc. All rights reserved.

  11. Qpais: A Web-Based Expert System for Assistedidentification of Quarantine Stored Insect Pests

    NASA Astrophysics Data System (ADS)

    Huang, Han; Rajotte, Edwin G.; Li, Zhihong; Chen, Ke; Zhang, Shengfang

    Stored insect pests can seriously depredate stored products causing worldwide economic losses. Pests enter countries traveling with transported goods. Inspection and Quarantine activities are essential to prevent the invasion and spread of pests. Identification of quarantine stored insect pests is an important component of the China's Inspection and Quarantine procedure, and it is necessary not only to identify whether the species captured is an invasive species, but determine control procedures for stored insect pests. With the development of information technologies, many expert systems that aid in the identification of agricultural pests have been developed. Expert systems for the identification of quarantine stored insect pests are rare and are mainly developed for stand-alone PCs. This paper describes the development of a web-based expert system for identification of quarantine stored insect pests as part of the China 11th Five-Year National Scientific and Technological Support Project (115 Project). Based on user needs, textual knowledge and images were gathered from the literature and expert interviews. ASP.NET, C# and SQL language were used to program the system. Improvement of identification efficiency and flexibility was achieved using a new inference method called characteristic-select-based spatial distance method. The expert system can assist identifying 150 species of quarantine stored insect pests and provide detailed information for each species. The expert system has also been evaluated using two steps: system testing and identification testing. With a 85% rate of correct identification and high efficiency, the system evaluation shows that this expert system can be used in identification work of quarantine stored insect pests.

  12. Bt maize and integrated pest management--a European perspective.

    PubMed

    Meissle, Michael; Romeis, Jörg; Bigler, Franz

    2011-09-01

    The European corn borer (Ostrinia nubilalis), the Mediterranean corn borer (Sesamia nonagrioides) and the western corn rootworm (Diabrotica virgifera virgifera) are the main arthropod pests in European maize production. Practised pest control includes chemical control, biological control and cultural control such as ploughing and crop rotation. A pest control option that is available since 1996 is maize varieties that are genetically engineered (GE) to produce insecticidal compounds. GE maize varieties available today express one or several genes from Bacillus thuringiensis (Bt) that target corn borers or corn rootworms. Incentives to growing Bt maize are simplified farm operations, high pest control efficiency, improved grain quality and ecological benefits. Limitations include the risk of resistance evolution in target pest populations, risk of secondary pest outbreaks and increased administration to comply with licence agreements. Growers willing to plant Bt maize in the European Union (EU) often face the problem that authorisation is denied. Only one Bt maize transformation event (MON810) is currently authorised for commercial cultivation, and some national authorities have banned cultivation. Spain is the only EU member state where Bt maize adoption levels are currently delivering farm income gains near full potential levels. In an integrated pest management (IPM) context, Bt maize can be regarded as a preventive (host plant resistance) or a responsive pest control measure. In any case, Bt maize is a highly specific tool that efficiently controls the main pests and allows combination with other preventive or responsive measures to solve other agricultural problems including those with secondary pests. Copyright © 2011 Society of Chemical Industry.

  13. PEST reduces bias in forced choice psychophysics.

    PubMed

    Taylor, M M; Forbes, S M; Creelman, C D

    1983-11-01

    Observers performed several different detection tasks using both the PEST adaptive psychophysical procedure and a fixed-level (method of constant stimuli) psychophysical procedure. In two experiments, PEST runs targeted at P (C) = 0.80 were immediately followed by fixed-level detection runs presented at the difficulty level resulting from the PEST run. The fixed-level runs yielded P (C) about 0.75. During the fixed-level runs, the probability of a correct response was greater when the preceding response was correct than when it was wrong. Observers, even highly trained ones, perform in a nonstationary manner. The sequential dependency data can be used to determine a lower bound for the observer's "true" capability when performing optimally; this lower bound is close to the PEST target, and well above the forced choice P (C). The observer's "true" capability is the measure used by most theories of detection performance. A further experiment compared psychometric functions obtained from a set of PEST runs using different targets with those obtained from blocks of fixed-level trials at different levels. PEST results were more stable across observers, performance at all but the highest signal levels was better with PEST, and the PEST psychometric functions had shallower slopes. We hypothesize that PEST permits the observer to keep track of what he is trying to detect, whereas in the fixed-level method performance is disrupted by memory failure. Some recently suggested "more virulent" versions of PEST may be subject to biases similar to those of the fixed-level procedures.(ABSTRACT TRUNCATED AT 250 WORDS)

  14. 7 CFR 330.212 - Movement of plant pests by baggage.

    Code of Federal Regulations, 2010 CFR

    2010-01-01

    ... 7 Agriculture 5 2010-01-01 2010-01-01 false Movement of plant pests by baggage. 330.212 Section 330.212 Agriculture Regulations of the Department of Agriculture (Continued) ANIMAL AND PLANT HEALTH INSPECTION SERVICE, DEPARTMENT OF AGRICULTURE FEDERAL PLANT PEST REGULATIONS; GENERAL; PLANT PESTS; SOIL...

  15. 7 CFR 330.212 - Movement of plant pests by baggage.

    Code of Federal Regulations, 2014 CFR

    2014-01-01

    ... 7 Agriculture 5 2014-01-01 2014-01-01 false Movement of plant pests by baggage. 330.212 Section 330.212 Agriculture Regulations of the Department of Agriculture (Continued) ANIMAL AND PLANT HEALTH INSPECTION SERVICE, DEPARTMENT OF AGRICULTURE FEDERAL PLANT PEST REGULATIONS; GENERAL; PLANT PESTS; SOIL...

  16. 7 CFR 330.212 - Movement of plant pests by baggage.

    Code of Federal Regulations, 2011 CFR

    2011-01-01

    ... 7 Agriculture 5 2011-01-01 2011-01-01 false Movement of plant pests by baggage. 330.212 Section 330.212 Agriculture Regulations of the Department of Agriculture (Continued) ANIMAL AND PLANT HEALTH INSPECTION SERVICE, DEPARTMENT OF AGRICULTURE FEDERAL PLANT PEST REGULATIONS; GENERAL; PLANT PESTS; SOIL...

  17. 7 CFR 330.212 - Movement of plant pests by baggage.

    Code of Federal Regulations, 2012 CFR

    2012-01-01

    ... 7 Agriculture 5 2012-01-01 2012-01-01 false Movement of plant pests by baggage. 330.212 Section 330.212 Agriculture Regulations of the Department of Agriculture (Continued) ANIMAL AND PLANT HEALTH INSPECTION SERVICE, DEPARTMENT OF AGRICULTURE FEDERAL PLANT PEST REGULATIONS; GENERAL; PLANT PESTS; SOIL...

  18. 7 CFR 330.212 - Movement of plant pests by baggage.

    Code of Federal Regulations, 2013 CFR

    2013-01-01

    ... 7 Agriculture 5 2013-01-01 2013-01-01 false Movement of plant pests by baggage. 330.212 Section 330.212 Agriculture Regulations of the Department of Agriculture (Continued) ANIMAL AND PLANT HEALTH INSPECTION SERVICE, DEPARTMENT OF AGRICULTURE FEDERAL PLANT PEST REGULATIONS; GENERAL; PLANT PESTS; SOIL...

  19. 7 CFR 330.201 - Applications for permits to move plant pests.

    Code of Federal Regulations, 2010 CFR

    2010-01-01

    ... 7 Agriculture 5 2010-01-01 2010-01-01 false Applications for permits to move plant pests. 330.201 Section 330.201 Agriculture Regulations of the Department of Agriculture (Continued) ANIMAL AND PLANT HEALTH INSPECTION SERVICE, DEPARTMENT OF AGRICULTURE FEDERAL PLANT PEST REGULATIONS; GENERAL; PLANT PESTS...

  20. Citizen's Guide to Pesticides.

    ERIC Educational Resources Information Center

    Environmental Protection Agency, Washington, DC. Office of Pesticide Programs.

    This guide provides suggestions on pest control and safety rules for pesticide use at home. Pest prevention may be possible by modification of pest habitat: removal of food and water sources, removal or destruction of pest shelter and breeding sites, and good horticultural practices that reduce plant stress. Nonchemical alternatives to pesticides…

  1. 9 CFR 416.2 - Establishment grounds and facilities.

    Code of Federal Regulations, 2014 CFR

    2014-01-01

    ... ACT SANITATION § 416.2 Establishment grounds and facilities. (a) Grounds and pest control. The grounds... place a pest management program to prevent the harborage and breeding of pests on the grounds and within establishment facilities. Pest control substances used must be safe and effective under the conditions of use...

  2. 9 CFR 416.2 - Establishment grounds and facilities.

    Code of Federal Regulations, 2013 CFR

    2013-01-01

    ... ACT SANITATION § 416.2 Establishment grounds and facilities. (a) Grounds and pest control. The grounds... place a pest management program to prevent the harborage and breeding of pests on the grounds and within establishment facilities. Pest control substances used must be safe and effective under the conditions of use...

  3. 9 CFR 416.2 - Establishment grounds and facilities.

    Code of Federal Regulations, 2012 CFR

    2012-01-01

    ... ACT SANITATION § 416.2 Establishment grounds and facilities. (a) Grounds and pest control. The grounds... place a pest management program to prevent the harborage and breeding of pests on the grounds and within establishment facilities. Pest control substances used must be safe and effective under the conditions of use...

  4. Fruit Crop Pests. MEP 312.

    ERIC Educational Resources Information Center

    Weaver, Leslie O.; And Others

    As part of a cooperative extension service series by the University of Maryland this publication introduces the identification and control of common agricultural pests of fruit crops. The first of the five sections defines "pest" and "weed" and generally introduces different kinds of pests in the categories of insects, weeds,…

  5. 78 FR 70257 - Submission for OMB Review; Comment Request

    Federal Register 2010, 2011, 2012, 2013, 2014

    2013-11-25

    ... introduction of a pest. The International Plant Protection Convention (IPPC) defines ``official control'' as... management of regulated non-quarantine pests. Need and Use of the Information: To obtain a program's...' management of pests in the plants for planting where the pest is maintained below a level that can affect...

  6. Field and Forage Crop Pests. MEP 310.

    ERIC Educational Resources Information Center

    Morgan, Omar, D.; And Others

    As part of a cooperative extension service series by the University of Maryland, this publication introduces the identification and control of common agricultural pests that can be found in field and forage crops. The first of the five sections defines "pest" and "weed" and generally introduces different kinds of pests in the…

  7. 7 CFR 330.201 - Applications for permits to move plant pests.

    Code of Federal Regulations, 2011 CFR

    2011-01-01

    ... 7 Agriculture 5 2011-01-01 2011-01-01 false Applications for permits to move plant pests. 330.201 Section 330.201 Agriculture Regulations of the Department of Agriculture (Continued) ANIMAL AND PLANT HEALTH INSPECTION SERVICE, DEPARTMENT OF AGRICULTURE FEDERAL PLANT PEST REGULATIONS; GENERAL; PLANT PESTS...

  8. Thiamethoxam seed treatments hav no impact on pest numbers or yield in cultivated sunflowers

    USDA-ARS?s Scientific Manuscript database

    The use of neonicotinoid seed treatments is a nearly ubiquitous practice in sunflower (Helianthus annuus) pest management. Sunflowers have a speciose pest complex, but also harbor a diverse and abundant community of beneficial, non-target organisms which may be negatively affected by pest management...

  9. General Pest Control - Industrial. Manual 95.

    ERIC Educational Resources Information Center

    Missouri Univ., Columbia. Agricultural Experiment Station.

    This training manual provides information needed to meet the minimum EPA standards for certification as a commercial applicator of pesticides in the general pest control category. The text discusses general, parasitic and miscellaneous pests such as ants, ticks, and spiders; fabric, wood-destroying, and grain pests such as beetles, termites, and…

  10. Hemlock Borer (Pest Alert)

    Treesearch

    USDA Forest Service

    2000-01-01

    The hemlock borer, Melanophila fulvoguttata (Harris), is a pest of eastern hemlock, Tsuga canadensis (L.) Carr., throughout its natural range. Although normally considered a secondary pest and seldom abundant, the borer can develop to outbreak conditions following wind-throw, drought, excessive stand openings, or attacks by other primary pests such as the hemlock...

  11. 7 CFR 330.204 - Denial or cancellation of permits; reconsiderations.

    Code of Federal Regulations, 2010 CFR

    2010-01-01

    ... AND PLANT HEALTH INSPECTION SERVICE, DEPARTMENT OF AGRICULTURE FEDERAL PLANT PEST REGULATIONS; GENERAL; PLANT PESTS; SOIL, STONE, AND QUARRY PRODUCTS; GARBAGE Movement of Plant Pests § 330.204 Denial or... to move a plant pest when, in his opinion, such movement would involve a danger of dissemination of...

  12. Integrated pest management is the lucrative bridge connecting the ever emerging knowledge islands of genetics and ecology

    USDA-ARS?s Scientific Manuscript database

    Integrated pest management has long been considered a profit- and product (or technology)-driven multidisciplinary research field that maximizes crop yield and minimizes pest-inflicted economic losses. The introduction of transgenic crops has revolutionized crop protection and pest management by com...

  13. 7 CFR 319.75-9 - Inspection and phytosanitary certificate of inspection.

    Code of Federal Regulations, 2011 CFR

    2011-01-01

    ... is free from injurious plant diseases, injurious insect pests, and other plant pests shall be... determining whether such article is free of injurious plant diseases, injurious insect pests, and other plant... determining whether such article is free from injurious plant diseases, or injurious insect pests, and other...

  14. Spatial and numerical relationships of arthropod communities associated with key pests of maize

    USDA-ARS?s Scientific Manuscript database

    Pest management largely focuses on managing individual pest species with little concern for the diverse communities that co-occur with key pests and potentially shape their population dynamics. During anthesis, we described the foliar arthropod communities on 53 maize farms throughout the region of ...

  15. Urban Pest Management. Selected Readings.

    ERIC Educational Resources Information Center

    Cowles, Kathleen Letcher, Comp.; And Others

    These readings provide basic background information on urban integrated pest management and the development of Integrated Pest Management (IPM) programs for the control of rodents, cockroaches, and head lice. IPM is a decision-making process for deciding if pest supprssion treatments are needed, when they should be initiated, where they should be…

  16. Driving pest populations: Agricultural chemicals lead to an adaptive syndrome in Nilaparvata lugens Stal (Hemiptera: Delphacidae)

    USDA-ARS?s Scientific Manuscript database

    Some of the effects of contemporary climate change and agricultural practices include increased pest ranges and thermotolerances and phonological mismatches between pest insects and their natural enemies. The brown planthopper (BPH) Nilaparvata lugens Stål (Hemiptera: Delphacidae) is a serious pest ...

  17. iTOUGH2 v7.1

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    FINSTERLE, STEFAN; JUNG, YOOJIN; KOWALSKY, MICHAEL

    2016-09-15

    iTOUGH2 (inverse TOUGH2) provides inverse modeling capabilities for TOUGH2, a simulator for multi-dimensional, multi-phase, multi-component, non-isothermal flow and transport in fractured porous media. iTOUGH2 performs sensitivity analyses, data-worth analyses, parameter estimation, and uncertainty propagation analyses in geosciences and reservoir engineering and other application areas. iTOUGH2 supports a number of different combinations of fluids and components (equation-of-state (EOS) modules). In addition, the optimization routines implemented in iTOUGH2 can also be used for sensitivity analysis, automatic model calibration, and uncertainty quantification of any external code that uses text-based input and output files using the PEST protocol. iTOUGH2 solves the inverse problem bymore » minimizing a non-linear objective function of the weighted differences between model output and the corresponding observations. Multiple minimization algorithms (derivative-free, gradient-based, and second-order; local and global) are available. iTOUGH2 also performs Latin Hypercube Monte Carlo simulations for uncertainty propagation analyses. A detailed residual and error analysis is provided. This upgrade includes (a) global sensitivity analysis methods, (b) dynamic memory allocation (c) additional input features and output analyses, (d) increased forward simulation capabilities, (e) parallel execution on multicore PCs and Linux clusters, and (f) bug fixes. More details can be found at http://esd.lbl.gov/iTOUGH2.« less

  18. COnstrained Data Extrapolation (CODE): A new approach for high definition vascular imaging from low resolution data.

    PubMed

    Song, Yang; Hamtaei, Ehsan; Sethi, Sean K; Yang, Guang; Xie, Haibin; Mark Haacke, E

    2017-12-01

    To introduce a new approach to reconstruct high definition vascular images using COnstrained Data Extrapolation (CODE) and evaluate its capability in estimating vessel area and stenosis. CODE is based on the constraint that the full width half maximum of a vessel can be accurately estimated and, since it represents the best estimate for the width of the object, higher k-space data can be generated from this information. To demonstrate the potential of extracting high definition vessel edges using low resolution data, both simulated and human data were analyzed to better visualize the vessels and to quantify both area and stenosis measurements. The results from CODE using one-fourth of the fully sampled k-space data were compared with a compressed sensing (CS) reconstruction approach using the same total amount of data but spread out between the center of k-space and the outer portions of the original k-space to accelerate data acquisition by a factor of four. For a sufficiently high signal-to-noise ratio (SNR) such as 16 (8), we found that objects as small as 3 voxels in the 25% under-sampled data (6 voxels when zero-filled) could be used for CODE and CS and provide an estimate of area with an error <5% (10%). For estimating up to a 70% stenosis with an SNR of 4, CODE was found to be more robust to noise than CS having a smaller variance albeit a larger bias. Reconstruction times were >200 (30) times faster for CODE compared to CS in the simulated (human) data. CODE was capable of producing sharp sub-voxel edges and accurately estimating stenosis to within 5% for clinically relevant studies of vessels with a width of at least 3pixels in the low resolution images. Copyright © 2017 Elsevier Inc. All rights reserved.

  19. Arthropods of the great indoors: characterizing diversity inside urban and suburban homes

    PubMed Central

    Leong, Misha; Bayless, Keith M.; Malow, Tara L.F.; Dunn, Robert R.; Trautwein, Michelle D.

    2016-01-01

    Although humans and arthropods have been living and evolving together for all of our history, we know very little about the arthropods we share our homes with apart from major pest groups. Here we surveyed, for the first time, the complete arthropod fauna of the indoor biome in 50 houses (located in and around Raleigh, North Carolina, USA). We discovered high diversity, with a conservative estimate range of 32–211 morphospecies, and 24–128 distinct arthropod families per house. The majority of this indoor diversity (73%) was made up of true flies (Diptera), spiders (Araneae), beetles (Coleoptera), and wasps and kin (Hymenoptera, especially ants: Formicidae). Much of the arthropod diversity within houses did not consist of synanthropic species, but instead included arthropods that were filtered from the surrounding landscape. As such, common pest species were found less frequently than benign species. Some of the most frequently found arthropods in houses, such as gall midges (Cecidomyiidae) and book lice (Liposcelididae), are unfamiliar to the general public despite their ubiquity. These findings present a new understanding of the diversity, prevalence, and distribution of the arthropods in our daily lives. Considering their impact as household pests, disease vectors, generators of allergens, and facilitators of the indoor microbiome, advancing our knowledge of the ecology and evolution of arthropods in homes has major economic and human health implications. PMID:26819844

  20. Arthropods of the great indoors: characterizing diversity inside urban and suburban homes.

    PubMed

    Bertone, Matthew A; Leong, Misha; Bayless, Keith M; Malow, Tara L F; Dunn, Robert R; Trautwein, Michelle D

    2016-01-01

    Although humans and arthropods have been living and evolving together for all of our history, we know very little about the arthropods we share our homes with apart from major pest groups. Here we surveyed, for the first time, the complete arthropod fauna of the indoor biome in 50 houses (located in and around Raleigh, North Carolina, USA). We discovered high diversity, with a conservative estimate range of 32-211 morphospecies, and 24-128 distinct arthropod families per house. The majority of this indoor diversity (73%) was made up of true flies (Diptera), spiders (Araneae), beetles (Coleoptera), and wasps and kin (Hymenoptera, especially ants: Formicidae). Much of the arthropod diversity within houses did not consist of synanthropic species, but instead included arthropods that were filtered from the surrounding landscape. As such, common pest species were found less frequently than benign species. Some of the most frequently found arthropods in houses, such as gall midges (Cecidomyiidae) and book lice (Liposcelididae), are unfamiliar to the general public despite their ubiquity. These findings present a new understanding of the diversity, prevalence, and distribution of the arthropods in our daily lives. Considering their impact as household pests, disease vectors, generators of allergens, and facilitators of the indoor microbiome, advancing our knowledge of the ecology and evolution of arthropods in homes has major economic and human health implications.

  1. The diversity of arthropods in homes across the United States as determined by environmental DNA analyses.

    PubMed

    Madden, Anne A; Barberán, Albert; Bertone, Matthew A; Menninger, Holly L; Dunn, Robert R; Fierer, Noah

    2016-12-01

    We spend most of our lives inside homes, surrounded by arthropods that impact our property as pests and our health as disease vectors and producers of sensitizing allergens. Despite their relevance to human health and well-being, we know relatively little about the arthropods that exist in our homes and the factors structuring their diversity. As previous work has been limited in scale by the costs and time associated with collecting arthropods and the subsequent morphological identification, we used a DNA-based method for investigating the arthropod diversity in homes via high-throughput marker gene sequencing of home dust. Settled dust samples were collected by citizen scientists from both inside and outside more than 700 homes across the United States, yielding the first continental-scale estimates of arthropod diversity associated with our residences. We were able to document food webs and previously unknown geographic distributions of diverse arthropods - from allergen producers to invasive species and nuisance pests. Home characteristics, including the presence of basements, home occupants and surrounding land use, were more useful than climate parameters in predicting arthropod diversity in homes. These noninvasive, scalable tools and resultant findings not only provide the first continental-scale maps of household arthropod diversity, but our analyses also provide valuable baseline information on arthropod allergen exposures and the distributions of invasive pests inside homes. © 2016 John Wiley & Sons Ltd.

  2. Survey of predators and sampling method comparison in sweet corn.

    PubMed

    Musser, Fred R; Nyrop, Jan P; Shelton, Anthony M

    2004-02-01

    Natural predation is an important component of integrated pest management that is often overlooked because it is difficult to quantify and perceived to be unreliable. To begin incorporating natural predation into sweet corn, Zea mays L., pest management, a predator survey was conducted and then three sampling methods were compared for their ability to accurately monitor the most abundant predators. A predator survey on sweet corn foliage in New York between 1999 and 2001 identified 13 species. Orius insidiosus (Say), Coleomegilla maculata (De Geer), and Harmonia axyridis (Pallas) were the most numerous predators in all years. To determine the best method for sampling adult and immature stages of these predators, comparisons were made among nondestructive field counts, destructive counts, and yellow sticky cards. Field counts were correlated with destructive counts for all populations, but field counts of small insects were biased. Sticky cards underrepresented immature populations. Yellow sticky cards were more attractive to C. maculata adults than H. axyridis adults, especially before pollen shed, making coccinellid population estimates based on sticky cards unreliable. Field counts were the most precise method for monitoring adult and immature stages of the three major predators. Future research on predicting predation of pests in sweet corn should be based on field counts of predators because these counts are accurate, have no associated supply costs, and can be made quickly.

  3. Accuracy, precision, and economic efficiency for three methods of thrips (Thysanoptera: Thripidae) population density assessment.

    PubMed

    Sutherland, Andrew M; Parrella, Michael P

    2011-08-01

    Western flower thrips, Frankliniella occidentalis (Pergande) (Thysanoptera: Thripidae), is a major horticultural pest and an important vector of plant viruses in many parts of the world. Methods for assessing thrips population density for pest management decision support are often inaccurate or imprecise due to thrips' positive thigmotaxis, small size, and naturally aggregated populations. Two established methods, flower tapping and an alcohol wash, were compared with a novel method, plant desiccation coupled with passive trapping, using accuracy, precision and economic efficiency as comparative variables. Observed accuracy was statistically similar and low (37.8-53.6%) for all three methods. Flower tapping was the least expensive method, in terms of person-hours, whereas the alcohol wash method was the most expensive. Precision, expressed by relative variation, depended on location within the greenhouse, location on greenhouse benches, and the sampling week, but it was generally highest for the flower tapping and desiccation methods. Economic efficiency, expressed by relative net precision, was highest for the flower tapping method and lowest for the alcohol wash method. Advantages and disadvantages are discussed for all three methods used. If relative density assessment methods such as these can all be assumed to accurately estimate a constant proportion of absolute density, then high precision becomes the methodological goal in terms of measuring insect population density, decision making for pest management, and pesticide efficacy assessments.

  4. P-Code-Enhanced Encryption-Mode Processing of GPS Signals

    NASA Technical Reports Server (NTRS)

    Young, Lawrence; Meehan, Thomas; Thomas, Jess B.

    2003-01-01

    A method of processing signals in a Global Positioning System (GPS) receiver has been invented to enable the receiver to recover some of the information that is otherwise lost when GPS signals are encrypted at the transmitters. The need for this method arises because, at the option of the military, precision GPS code (P-code) is sometimes encrypted by a secret binary code, denoted the A code. Authorized users can recover the full signal with knowledge of the A-code. However, even in the absence of knowledge of the A-code, one can track the encrypted signal by use of an estimate of the A-code. The present invention is a method of making and using such an estimate. In comparison with prior such methods, this method makes it possible to recover more of the lost information and obtain greater accuracy.

  5. Coding efficiency of AVS 2.0 for CBAC and CABAC engines

    NASA Astrophysics Data System (ADS)

    Cui, Jing; Choi, Youngkyu; Chae, Soo-Ik

    2015-12-01

    In this paper we compare the coding efficiency of AVS 2.0[1] for engines of the Context-based Binary Arithmetic Coding (CBAC)[2] in the AVS 2.0 and the Context-Adaptive Binary Arithmetic Coder (CABAC)[3] in the HEVC[4]. For fair comparison, the CABAC is embedded in the reference code RD10.1 because the CBAC is in the HEVC in our previous work[5]. The rate estimation table is employed only for RDOQ in the RD code. To reduce the computation complexity of the video encoder, therefore we modified the RD code so that the rate estimation table is employed for all RDO decision. Furthermore, we also simplify the complexity of rate estimation table by reducing the bit depth of its fractional part to 2 from 8. The simulation result shows that the CABAC has the BD-rate loss of about 0.7% compared to the CBAC. It seems that the CBAC is a little more efficient than that the CABAC in the AVS 2.0.

  6. Groundwater flow simulation of the Savannah River Site general separations area

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Flach, G.; Bagwell, L.; Bennett, P.

    The most recent groundwater flow model of the General Separations Area, Savannah River Site, is referred to as the “GSA/PORFLOW” model. GSA/PORFLOW was developed in 2004 by porting an existing General Separations Area groundwater flow model from the FACT code to the PORFLOW code. The preceding “GSA/FACT” model was developed in 1997 using characterization and monitoring data through the mid-1990’s. Both models were manually calibrated to field data. Significantly more field data have been acquired since the 1990’s and model calibration using mathematical optimization software has become routine and recommended practice. The current task involved updating the GSA/PORFLOW model usingmore » selected field data current through at least 2015, and use of the PEST code to calibrate the model and quantify parameter uncertainty. This new GSA groundwater flow model is named “GSA2016” in reference to the year in which most development occurred. The GSA2016 model update is intended to address issues raised by the DOE Low-Level Waste (LLW) Disposal Facility Federal Review Group (LFRG) in a 2008 review of the E-Area Performance Assessment, and by the Nuclear Regulatory Commission in reviews of tank closure and Saltstone Disposal Facility Performance Assessments.« less

  7. Tenebrio molitor antifreeze protein gene identification and regulation.

    PubMed

    Qin, Wensheng; Walker, Virginia K

    2006-02-15

    The yellow mealworm, Tenebrio molitor, is a freeze susceptible, stored product pest. Its winter survival is facilitated by the accumulation of antifreeze proteins (AFPs), encoded by a small gene family. We have now isolated 11 different AFP genomic clones from 3 genomic libraries. All the clones had a single coding sequence, with no evidence of intervening sequences. Three genomic clones were further characterized. All have putative TATA box sequences upstream of the coding regions and multiple potential poly(A) signal sequences downstream of the coding regions. A TmAFP regulatory region, B1037, conferred transcriptional activity when ligated to a luciferase reporter sequence and after transfection into an insect cell line. A 143 bp core promoter including a TATA box sequence was identified. Its promoter activity was increased 4.4 times by inserting an exotic 245 bp intron into the construct, similar to the enhancement of transgenic expression seen in several other systems. The addition of a duplication of the first 120 bp sequence from the 143 bp core promoter decreased promoter activity by half. Although putative hormonal response sequences were identified, none of the five hormones tested enhanced reporter activity. These studies on the mechanisms of AFP transcriptional control are important for the consideration of any transfer of freeze-resistance phenotypes to beneficial hosts.

  8. Review of major sweetpotato pests in Japan, with information on resistance breeding programs.

    PubMed

    Okada, Yoshihiro; Kobayashi, Akira; Tabuchi, Hiroaki; Kuranouchi, Toshikazu

    2017-01-01

    Sweetpotato ( Ipomoeae batatas (L.) Lam.) is an important food crop affected by several pests throughout the world, especially in tropical, subtropical, and temperate regions. Although Japan is relatively free from many serious sweetpotato pests, some pests, especially soil-borne pathogens, viruses, and insects such as plant-parasitic nematodes and weevils, cause severe damage in Japan. In this review, we describe the current status and management options for sweetpotato pests and diseases in Japan and review research related to sweetpotato breeding that can promote resistance to these problems. Furthermore, we describe methods to evaluate resistance to pests and disease used in sweetpotato breeding at the National Agriculture and Food Research Organization (NARO).

  9. Fitness trade-offs in pest management and intercropping with colour: an evolutionary framework and potential application

    PubMed Central

    Farkas, Timothy E

    2015-01-01

    An important modern goal of plant science research is to develop tools for agriculturalists effective at curbing yield losses to insect herbivores, but resistance evolution continuously threatens the efficacy of pest management strategies. The high-dose/refuge strategy has been employed with some success to curb pest adaptation, and has been shown to be most effective when fitness costs (fitness trade-offs) of resistance are high. Here, I use eco-evolutionary reasoning to demonstrate the general importance of fitness trade-offs for pest control, showing that strong fitness trade-offs mitigate the threat of pest adaptation, even if adaptation were to occur. I argue that novel pest management strategies evoking strong fitness trade-offs are the most likely to persist in the face of unbridled pest adaptation, and offer the manipulation of crop colours as a worked example of one potentially effective strategy against insect herbivores. PMID:26495038

  10. Fitness trade-offs in pest management and intercropping with colour: an evolutionary framework and potential application.

    PubMed

    Farkas, Timothy E

    2015-10-01

    An important modern goal of plant science research is to develop tools for agriculturalists effective at curbing yield losses to insect herbivores, but resistance evolution continuously threatens the efficacy of pest management strategies. The high-dose/refuge strategy has been employed with some success to curb pest adaptation, and has been shown to be most effective when fitness costs (fitness trade-offs) of resistance are high. Here, I use eco-evolutionary reasoning to demonstrate the general importance of fitness trade-offs for pest control, showing that strong fitness trade-offs mitigate the threat of pest adaptation, even if adaptation were to occur. I argue that novel pest management strategies evoking strong fitness trade-offs are the most likely to persist in the face of unbridled pest adaptation, and offer the manipulation of crop colours as a worked example of one potentially effective strategy against insect herbivores.

  11. Climate change alters diffusion of forest pest: A model study

    NASA Astrophysics Data System (ADS)

    Jo, Woo Seong; Kim, Hwang-Yong; Kim, Beom Jun

    2017-01-01

    Population dynamics with spatial information is applied to understand the spread of pests. We introduce a model describing how pests spread in discrete space. The number of pest descendants at each site is controlled by local information such as temperature, precipitation, and the density of pine trees. Our simulation leads to a pest spreading pattern comparable to the real data for pine needle gall midge in the past. We also simulate the model in two different climate conditions based on two different representative concentration pathways scenarios for the future. We observe that after an initial stage of a slow spread of pests, a sudden change in the spreading speed occurs, which is soon followed by a large-scale outbreak. We found that a future climate change causes the outbreak point to occur earlier and that the detailed spatio-temporal pattern of the spread depends on the source position from which the initial pest infection starts.

  12. Multi-scale modeling of irradiation effects in spallation neutron source materials

    NASA Astrophysics Data System (ADS)

    Yoshiie, T.; Ito, T.; Iwase, H.; Kaneko, Y.; Kawai, M.; Kishida, I.; Kunieda, S.; Sato, K.; Shimakawa, S.; Shimizu, F.; Hashimoto, S.; Hashimoto, N.; Fukahori, T.; Watanabe, Y.; Xu, Q.; Ishino, S.

    2011-07-01

    Changes in mechanical property of Ni under irradiation by 3 GeV protons were estimated by multi-scale modeling. The code consisted of four parts. The first part was based on the Particle and Heavy-Ion Transport code System (PHITS) code for nuclear reactions, and modeled the interactions between high energy protons and nuclei in the target. The second part covered atomic collisions by particles without nuclear reactions. Because the energy of the particles was high, subcascade analysis was employed. The direct formation of clusters and the number of mobile defects were estimated using molecular dynamics (MD) and kinetic Monte-Carlo (kMC) methods in each subcascade. The third part considered damage structural evolutions estimated by reaction kinetic analysis. The fourth part involved the estimation of mechanical property change using three-dimensional discrete dislocation dynamics (DDD). Using the above four part code, stress-strain curves for high energy proton irradiated Ni were obtained.

  13. Modeling the rejection probability in plant imports.

    PubMed

    Surkov, I V; van der Werf, W; van Kooten, O; Lansink, A G J M Oude

    2008-06-01

    Phytosanitary inspection of imported plants and flowers is a major means for preventing pest invasions through international trade, but in a majority of countries availability of resources prevents inspection of all imports. Prediction of the likelihood of pest infestation in imported shipments could help maximize the efficiency of inspection by targeting inspection on shipments with the highest likelihood of infestation. This paper applies a multinomial logistic (MNL) regression model to data on import inspections of ornamental plant commodities in the Netherlands from 1998 to 2001 to investigate whether it is possible to predict the probability that a shipment will be (i) accepted for import, (ii) rejected for import because of detected pests, or (iii) rejected due to other reasons. Four models were estimated: (i) an all-species model, including all plant imports (136,251 shipments) in the data set, (ii) a four-species model, including records on the four ornamental commodities that accounted for 28.9% of inspected and 49.5% of rejected shipments, and two models for single commodities with large import volumes and percentages of rejections, (iii) Dianthus (16.9% of inspected and 46.3% of rejected shipments), and (iv) Chrysanthemum (6.9 and 8.6%, respectively). All models were highly significant (P < 0.001). The models for Dianthus and Chrysanthemum and for the set of four ornamental commodities showed a better fit to data than the model for all ornamental commodities. Variables that characterized the imported shipment's region of origin, the shipment's size, the company that imported the shipment, and season and year of import, were significant in most of the estimated models. The combined results of this study suggest that the MNL model can be a useful tool for modeling the probability of rejecting imported commodities even with a small set of explanatory variables. The MNL model can be helpful in better targeting of resources for import inspection. The inspecting agencies could enable development of these models by appropriately recording inspection results.

  14. Ornamental, Turf and Nursery Pests. MEP 308.

    ERIC Educational Resources Information Center

    Morgan, Omar D.; And Others

    As part of a cooperative extension service series by the University of Maryland, this publication introduces the identification and control of common turf and plant pests that can be found in the urban environment. The first of the five sections defines "pest" and "weed" and generally introduces different kinds of pests such as…

  15. Identification and Control of Common Insect Pests of Ornamental Shrubs and Trees.

    ERIC Educational Resources Information Center

    Gesell, Stanley G.

    This agriculture extension service publication from Pennsylvania State University introduces the identification and control of common ornamental insect pests. For each of the insects or insect groups (i.e. aphids) identified in this publication, information on host plants, pest description, and damage caused by the pest is given. Also a calendar…

  16. 7 CFR 205.672 - Emergency pest or disease treatment.

    Code of Federal Regulations, 2010 CFR

    2010-01-01

    ... 7 Agriculture 3 2010-01-01 2010-01-01 false Emergency pest or disease treatment. 205.672 Section... Exclusion from Sale § 205.672 Emergency pest or disease treatment. When a prohibited substance is applied to a certified operation due to a Federal or State emergency pest or disease treatment program and the...

  17. 7 CFR 205.672 - Emergency pest or disease treatment.

    Code of Federal Regulations, 2011 CFR

    2011-01-01

    ... 7 Agriculture 3 2011-01-01 2011-01-01 false Emergency pest or disease treatment. 205.672 Section... Exclusion from Sale § 205.672 Emergency pest or disease treatment. When a prohibited substance is applied to a certified operation due to a Federal or State emergency pest or disease treatment program and the...

  18. Molecular survey for the invasive leafminer pest Liriomyza Huidobrensis in California (Diptera: Agromyzidae) uncovers only the native pest L. langei

    USDA-ARS?s Scientific Manuscript database

    Liriomyza huidobrensis is a highly destructive invasive leafminer pest currently causing extensive damage to vegetable and horticultural crops around the world. Liriomyza langei is a leafminer pest native to California that cannot currently be morphologically distinguished from L. huidobrensis. This...

  19. 7 CFR 205.672 - Emergency pest or disease treatment.

    Code of Federal Regulations, 2012 CFR

    2012-01-01

    ... 7 Agriculture 3 2012-01-01 2012-01-01 false Emergency pest or disease treatment. 205.672 Section... Exclusion from Sale § 205.672 Emergency pest or disease treatment. When a prohibited substance is applied to a certified operation due to a Federal or State emergency pest or disease treatment program and the...

  20. 7 CFR 205.672 - Emergency pest or disease treatment.

    Code of Federal Regulations, 2014 CFR

    2014-01-01

    ... 7 Agriculture 3 2014-01-01 2014-01-01 false Emergency pest or disease treatment. 205.672 Section... Exclusion from Sale § 205.672 Emergency pest or disease treatment. When a prohibited substance is applied to a certified operation due to a Federal or State emergency pest or disease treatment program and the...

  1. 7 CFR 205.672 - Emergency pest or disease treatment.

    Code of Federal Regulations, 2013 CFR

    2013-01-01

    ... 7 Agriculture 3 2013-01-01 2013-01-01 false Emergency pest or disease treatment. 205.672 Section... Exclusion from Sale § 205.672 Emergency pest or disease treatment. When a prohibited substance is applied to a certified operation due to a Federal or State emergency pest or disease treatment program and the...

  2. Unwelcome Guests: Extoic Forest Pests

    Treesearch

    Sun Jiang-Hua

    2002-01-01

    Exotic forest pests cost China and the United States billions of dollars each year. Current regulatory systems worldwide are over-whelmed with the increasing volume of international trade. Trade in nursery stock, wood products, pallets and dunnage have proven the most common means of transport for exotic forest pests. Despite our best efforts, pests such as chestnut...

  3. 76 FR 56730 - Determination of Pest-Free Areas in Australia; Request for Comments

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-09-14

    ... Health Inspection Service [Docket No. APHIS-2011-0088] Determination of Pest-Free Areas in Australia... additional areas as pest- free areas for Mediterranean fruit fly (Ceratitis capitata) or Queensland fruit fly... in our regulations for recognition as pest-free areas. We are making that determination, as well as...

  4. Pest Control and Related Orchard Practices in Commercial Fruit Plantings. Circular 1151.

    ERIC Educational Resources Information Center

    Ries, S. M.; And Others

    This circular brings together suggestions from the Illinois Agricultural Experiment Station and the Illinois State Natural History Survey relating to orchard practices and pest control. It provides some basic steps in pest control and discusses some specific orchard pests such as grasshoppers, mites, mice, and rabbits. In addition, it gives some…

  5. Pest Control in the School Environment: Adopting Integrated Pest Management.

    ERIC Educational Resources Information Center

    Environmental Protection Agency, Washington, DC. Office of Pesticide Programs.

    As the public becomes more aware of the health and environmental risks pesticides may pose, its interest in seeking the use of equally effective alternative pest control methods increases. School administrators and other persons who have pest control decision-making responsibilities for school buildings and grounds can use this guide to become…

  6. Opportunities for microbial control of pulse crop pests

    USDA-ARS?s Scientific Manuscript database

    The insect pest complex in U.S. pulse crops is almost an “orphan” in terms of developed microbial control agents that the grower can use. There are almost no registered microbial pest control agents (MPCA) for the different pulse pests. In some cases a microbial is registered for use against specifi...

  7. 76 FR 37770 - Monsanto Co.; Availability of Petition, Plant Pest Risk Assessment, and Environmental Assessment...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-06-28

    ...] Monsanto Co.; Availability of Petition, Plant Pest Risk Assessment, and Environmental Assessment for... environmental assessment, or plant pest risk assessment, contact Ms. Cindy Eck at (301) 734-0667; email: cynthia... event MON 87701 is unlikely to pose a plant pest risk. APHIS has also prepared a draft environmental...

  8. 78 FR 23208 - Importation of Fresh Oranges and Tangerines From Egypt Into the United States

    Federal Register 2010, 2011, 2012, 2013, 2014

    2013-04-18

    ... prepared a pest list associated with oranges and tangerines from Egypt that identifies pests of concern... application of one or more designated phytosanitary measures will be sufficient to mitigate the pest risk. In... oranges and tangerines. We are making the pest list, commodity import evaluation document, and treatment...

  9. Integrated Management of Structural Pests in Schools.

    ERIC Educational Resources Information Center

    Illinois State Dept. of Public Health, Springfield.

    The state of Illinois is encouraging schools to better inspect and evaluate the causes of their pest infestation problems through use of the Integrated Pest Management (IPM) guidelines developed by the Illinois Department of Public Health. This guide reviews the philosophy and organization of an IPM program for structural pests in schools,…

  10. 7 CFR 330.207 - Permits for movement of organisms issued by other agencies.

    Code of Federal Regulations, 2010 CFR

    2010-01-01

    ...) ANIMAL AND PLANT HEALTH INSPECTION SERVICE, DEPARTMENT OF AGRICULTURE FEDERAL PLANT PEST REGULATIONS; GENERAL; PLANT PESTS; SOIL, STONE, AND QUARRY PRODUCTS; GARBAGE Movement of Plant Pests § 330.207 Permits... pests, any further conditions of movement to carry out the purposes of the Plant Protection Act which...

  11. Peptidergic control of a fruit crop pest: the spotted-wing drosophila, Drosophila suzukii

    USDA-ARS?s Scientific Manuscript database

    Neuropeptides play an important role in the regulation of feeding in insects and offer potential targets for the development of new chemicals to control insect pests. A pest that has attracted much recent attention is the highly invasive Drosophila suzukii, a polyphagous pest that can cause serious...

  12. 7 CFR 319.40-11 - Plant pest risk assessment standards.

    Code of Federal Regulations, 2013 CFR

    2013-01-01

    ... will be further evaluated in accordance with paragraph (c) of this section: (1) Non-indigenous plant pest not present in the United States; (2) Non-indigenous plant pest, present in the United States and capable of further dissemination in the United States; (3) Non-indigenous plant pest that is present in...

  13. 7 CFR 319.40-11 - Plant pest risk assessment standards.

    Code of Federal Regulations, 2014 CFR

    2014-01-01

    ... will be further evaluated in accordance with paragraph (c) of this section: (1) Non-indigenous plant pest not present in the United States; (2) Non-indigenous plant pest, present in the United States and capable of further dissemination in the United States; (3) Non-indigenous plant pest that is present in...

  14. 7 CFR 319.40-11 - Plant pest risk assessment standards.

    Code of Federal Regulations, 2012 CFR

    2012-01-01

    ... will be further evaluated in accordance with paragraph (c) of this section: (1) Non-indigenous plant pest not present in the United States; (2) Non-indigenous plant pest, present in the United States and capable of further dissemination in the United States; (3) Non-indigenous plant pest that is present in...

  15. Pest risk maps for invasive alien species: a roadmap for improvement

    Treesearch

    Robert C. Venette; Darren J. Kriticos; Roger D. Magarey; Frank H. Koch; Richard H.A. Baker; Susan P. Worner; Nadilia N. Gomez Raboteaux; Daniel W. McKenney; Erhard J. Dobesberger; Denys Yemshanov; Paul J. De Barro; William D. Hutchison; Glenn Fowler; Tom M. Kalaris; John Pedlar

    2010-01-01

    Pest risk maps are powerful visual communication tools to describe where invasive alien species might arrive, establish, spread, or cause harmful impacts. These maps inform strategic and tactical pest management decisions, such as potential restrictions on international trade or the design of pest surveys and domestic quarantines. Diverse methods are available to...

  16. Beverton-Holt discrete pest management models with pulsed chemical control and evolution of pesticide resistance

    NASA Astrophysics Data System (ADS)

    Liang, Juhua; Tang, Sanyi; Cheke, Robert A.

    2016-07-01

    Pest resistance to pesticides is usually managed by switching between different types of pesticides. The optimal switching time, which depends on the dynamics of the pest population and on the evolution of the pesticide resistance, is critical. Here we address how the dynamic complexity of the pest population, the development of resistance and the spraying frequency of pulsed chemical control affect optimal switching strategies given different control aims. To do this, we developed novel discrete pest population growth models with both impulsive chemical control and the evolution of pesticide resistance. Strong and weak threshold conditions which guarantee the extinction of the pest population, based on the threshold values of the analytical formula for the optimal switching time, were derived. Further, we addressed switching strategies in the light of chosen economic injury levels. Moreover, the effects of the complex dynamical behaviour of the pest population on the pesticide switching times were also studied. The pesticide application period, the evolution of pesticide resistance and the dynamic complexity of the pest population may result in complex outbreak patterns, with consequent effects on the pesticide switching strategies.

  17. Biologically Based Methods for Pest Management in Agriculture under Changing Climates: Challenges and Future Directions.

    PubMed

    Chidawanyika, Frank; Mudavanhu, Pride; Nyamukondiwa, Casper

    2012-11-09

    The current changes in global climatic regimes present a significant societal challenge, affecting in all likelihood insect physiology, biochemistry, biogeography and population dynamics. With the increasing resistance of many insect pest species to chemical insecticides and an increasing organic food market, pest control strategies are slowly shifting towards more sustainable, ecologically sound and economically viable options. Biologically based pest management strategies present such opportunities through predation or parasitism of pests and plant direct or indirect defense mechanisms that can all be important components of sustainable integrated pest management programs. Inevitably, the efficacy of biological control systems is highly dependent on natural enemy-prey interactions, which will likely be modified by changing climates. Therefore, knowledge of how insect pests and their natural enemies respond to climate variation is of fundamental importance in understanding biological insect pest management under global climate change. Here, we discuss biological control, its challenges under climate change scenarios and how increased global temperatures will require adaptive management strategies to cope with changing status of insects and their natural enemies.

  18. A CU-Level Rate and Distortion Estimation Scheme for RDO of Hardware-Friendly HEVC Encoders Using Low-Complexity Integer DCTs.

    PubMed

    Lee, Bumshik; Kim, Munchurl

    2016-08-01

    In this paper, a low complexity coding unit (CU)-level rate and distortion estimation scheme is proposed for High Efficiency Video Coding (HEVC) hardware-friendly implementation where a Walsh-Hadamard transform (WHT)-based low-complexity integer discrete cosine transform (DCT) is employed for distortion estimation. Since HEVC adopts quadtree structures of coding blocks with hierarchical coding depths, it becomes more difficult to estimate accurate rate and distortion values without actually performing transform, quantization, inverse transform, de-quantization, and entropy coding. Furthermore, DCT for rate-distortion optimization (RDO) is computationally high, because it requires a number of multiplication and addition operations for various transform block sizes of 4-, 8-, 16-, and 32-orders and requires recursive computations to decide the optimal depths of CU or transform unit. Therefore, full RDO-based encoding is highly complex, especially for low-power implementation of HEVC encoders. In this paper, a rate and distortion estimation scheme is proposed in CU levels based on a low-complexity integer DCT that can be computed in terms of WHT whose coefficients are produced in prediction stages. For rate and distortion estimation in CU levels, two orthogonal matrices of 4×4 and 8×8 , which are applied to WHT that are newly designed in a butterfly structure only with addition and shift operations. By applying the integer DCT based on the WHT and newly designed transforms in each CU block, the texture rate can precisely be estimated after quantization using the number of non-zero quantized coefficients and the distortion can also be precisely estimated in transform domain without de-quantization and inverse transform required. In addition, a non-texture rate estimation is proposed by using a pseudoentropy code to obtain accurate total rate estimates. The proposed rate and the distortion estimation scheme can effectively be used for HW-friendly implementation of HEVC encoders with 9.8% loss over HEVC full RDO, which much less than 20.3% and 30.2% loss of a conventional approach and Hadamard-only scheme, respectively.

  19. Efficiency of International Classification of Diseases, Ninth Revision, Billing Code Searches to Identify Emergency Department Visits for Blood or Body Fluid Exposures through a Statewide Multicenter Database

    PubMed Central

    Rosen, Lisa M.; Liu, Tao; Merchant, Roland C.

    2016-01-01

    BACKGROUND Blood and body fluid exposures are frequently evaluated in emergency departments (EDs). However, efficient and effective methods for estimating their incidence are not yet established. OBJECTIVE Evaluate the efficiency and accuracy of estimating statewide ED visits for blood or body fluid exposures using International Classification of Diseases, Ninth Revision (ICD-9), code searches. DESIGN Secondary analysis of a database of ED visits for blood or body fluid exposure. SETTING EDs of 11 civilian hospitals throughout Rhode Island from January 1, 1995, through June 30, 2001. PATIENTS Patients presenting to the ED for possible blood or body fluid exposure were included, as determined by prespecified ICD-9 codes. METHODS Positive predictive values (PPVs) were estimated to determine the ability of 10 ICD-9 codes to distinguish ED visits for blood or body fluid exposure from ED visits that were not for blood or body fluid exposure. Recursive partitioning was used to identify an optimal subset of ICD-9 codes for this purpose. Random-effects logistic regression modeling was used to examine variations in ICD-9 coding practices and styles across hospitals. Cluster analysis was used to assess whether the choice of ICD-9 codes was similar across hospitals. RESULTS The PPV for the original 10 ICD-9 codes was 74.4% (95% confidence interval [CI], 73.2%–75.7%), whereas the recursive partitioning analysis identified a subset of 5 ICD-9 codes with a PPV of 89.9% (95% CI, 88.9%–90.8%) and a misclassification rate of 10.1%. The ability, efficiency, and use of the ICD-9 codes to distinguish types of ED visits varied across hospitals. CONCLUSIONS Although an accurate subset of ICD-9 codes could be identified, variations across hospitals related to hospital coding style, efficiency, and accuracy greatly affected estimates of the number of ED visits for blood or body fluid exposure. PMID:22561713

  20. Evolutionary tools for phytosanitary risk analysis: phylogenetic signal as a predictor of host range of plant pests and pathogens

    PubMed Central

    Gilbert, Gregory S; Magarey, Roger; Suiter, Karl; Webb, Campbell O

    2012-01-01

    Assessing risk from a novel pest or pathogen requires knowing which local plant species are susceptible. Empirical data on the local host range of novel pests are usually lacking, but we know that some pests are more likely to attack closely related plant species than species separated by greater evolutionary distance. We use the Global Pest and Disease Database, an internal database maintained by the United States Department of Agriculture Animal and Plant Health Inspection Service – Plant Protection and Quarantine Division (USDA APHIS-PPQ), to evaluate the strength of the phylogenetic signal in host range for nine major groups of plant pests and pathogens. Eight of nine groups showed significant phylogenetic signal in host range. Additionally, pests and pathogens with more known hosts attacked a phylogenetically broader range of hosts. This suggests that easily obtained data – the number of known hosts and the phylogenetic distance between known hosts and other species of interest – can be used to predict which plant species are likely to be susceptible to a particular pest. This can facilitate rapid assessment of risk from novel pests and pathogens when empirical host range data are not yet available and guide efficient collection of empirical data for risk evaluation. PMID:23346231

  1. Chirosurveillance: The use of native bats to detect invasive agricultural pests.

    PubMed

    Maslo, Brooke; Valentin, Rafael; Leu, Karen; Kerwin, Kathleen; Hamilton, George C; Bevan, Amanda; Fefferman, Nina H; Fonseca, Dina M

    2017-01-01

    Invasive insect pests cost the agricultural industry billions of dollars annually in crop losses. Timely detection of pests is critical for management efficiency. Innovative pest detection strategies, such as environmental DNA (eDNA) techniques, combined with efficient predators, maximize sampling resolution across space and time and may improve surveillance. We tested the hypothesis that temperate insectivorous bats can be important sentinels of agricultural insect pest surveillance. Specifically, we used a new high-sensitivity molecular assay for invasive brown marmorated stink bugs (Halyomorpha halys) to examine the extent to which big brown bats (Eptesicus fuscus) detect agricultural pests in the landscape. We documented consistent seasonal predation of stink bugs by big brown bats. Importantly, bats detected brown marmorated stink bugs 3-4 weeks earlier than the current standard monitoring tool, blacklight traps, across all sites. We highlight here the previously unrecognized potential ecosystem service of bats as agents of pest surveillance (or chirosurveillance). Additional studies examining interactions between other bat and insect pest species, coupled with comparisons of detectability among various conventional monitoring methods, are needed to verify the patterns extracted from this study. Ultimately, robust economic analyses will be needed to assess the cost-effectiveness of chirosurveillance as a standard strategy for integrated pest management.

  2. Evolutionary tools for phytosanitary risk analysis: phylogenetic signal as a predictor of host range of plant pests and pathogens.

    PubMed

    Gilbert, Gregory S; Magarey, Roger; Suiter, Karl; Webb, Campbell O

    2012-12-01

    Assessing risk from a novel pest or pathogen requires knowing which local plant species are susceptible. Empirical data on the local host range of novel pests are usually lacking, but we know that some pests are more likely to attack closely related plant species than species separated by greater evolutionary distance. We use the Global Pest and Disease Database, an internal database maintained by the United States Department of Agriculture Animal and Plant Health Inspection Service - Plant Protection and Quarantine Division (USDA APHIS-PPQ), to evaluate the strength of the phylogenetic signal in host range for nine major groups of plant pests and pathogens. Eight of nine groups showed significant phylogenetic signal in host range. Additionally, pests and pathogens with more known hosts attacked a phylogenetically broader range of hosts. This suggests that easily obtained data - the number of known hosts and the phylogenetic distance between known hosts and other species of interest - can be used to predict which plant species are likely to be susceptible to a particular pest. This can facilitate rapid assessment of risk from novel pests and pathogens when empirical host range data are not yet available and guide efficient collection of empirical data for risk evaluation.

  3. Apple orchard pest control strategies affect bird communities in southeastern France.

    PubMed

    Bouvier, Jean-Charles; Ricci, Benoît; Agerberg, Julia; Lavigne, Claire

    2011-01-01

    Birds are regarded as appropriate biological indicators of how changes in agricultural practices affect the environment. They are also involved in the biocontrol of pests. In the present study, we provide an assessment of the impact of pest control strategies on bird communities in apple orchards in southeastern France. We compared the structure (abundance, species richness, and diversity) of breeding bird communities in 15 orchards under conventional or organic pest control over a three-year period (2003-2005). Pest control strategies and their evolution over time were characterized by analyzing farmers' treatment schedules. The landscape surrounding the orchards was characterized using a Geographic Information System. We observed 30 bird species overall. Bird abundance, species richness, and diversity were all affected by pest control strategies, and were highest in organic orchards and lowest in conventional orchards during the three study years. The pest control strategy affected insectivores more than granivores. We further observed a tendency for bird communities in integrated pest management orchards to change over time and become increasingly different from communities in organic orchards, which also corresponded to changes in treatment schedules. These findings indicate that within-orchard bird communities may respond quickly to changes in pesticide use and may, in turn, influence biocontrol of pests by birds. © 2010 SETAC.

  4. Nematode Damage Functions: The Problems of Experimental and Sampling Error

    PubMed Central

    Ferris, H.

    1984-01-01

    The development and use of pest damage functions involves measurement and experimental errors associated with cultural, environmental, and distributional factors. Damage predictions are more valuable if considered with associated probability. Collapsing population densities into a geometric series of population classes allows a pseudo-replication removal of experimental and sampling error in damage function development. Recognition of the nature of sampling error for aggregated populations allows assessment of probability associated with the population estimate. The product of the probabilities incorporated in the damage function and in the population estimate provides a basis for risk analysis of the yield loss prediction and the ensuing management decision. PMID:19295865

  5. Balancing competition for resources with multiple pest regulation in diversified agroecosystems: a process-based approach to reconcile diversification and productivity.

    PubMed

    Poeydebat, Charlotte; Carval, Dominique; de Lapeyre de Bellaire, Luc; Tixier, Philippe

    2016-12-01

    Agroecosystem plant diversification can enhance pest biological regulation and is a promising alternative to pesticide application. However, the costs of competition for resources between plants may exceed the benefits gained by pest regulation. To disentangle the interactions between pest regulation and competition, we developed a generic process-based approach that accounts for the effects of an associated plant and leaf and root pests on biomass production. We considered three crop-plant associations that differ in competition profiles, and we simulated biomass production under wide ranges of both pest regulation rates and resources' availability. We analyzed outputs to quantify the pest regulation service level that would be required to attain monoculture yield and other production goals. Results showed that pest regulation requirements were highly dependent on the profile of resource interception of the associated plant and on resources' availability. Pest regulation and the magnitude of competition between plants interacted in determining the balance between nitrogen and radiation uptake by the crop. Our findings suggest that productivity of diversified agroecosystems relative to monoculture should be optimized by assembling plants whose characteristics balance crops' resource acquisition. The theoretical insights from our study draw generic rules for vegetation assemblage to optimize trade-offs between pest regulation and production. Our findings and approach may have implications in understanding, theorizing and implementing agroecosystem diversification. By its generic and adaptable structure, our approach should be useful for studying the effects of diversification in many agroecosystems.

  6. Biocontrol in an impulsive predator-prey model.

    PubMed

    Terry, Alan J

    2014-10-01

    We study a model for biological pest control (or "biocontrol") in which a pest population is controlled by a program of periodic releases of a fixed yield of predators that prey on the pest. Releases are represented as impulsive increases in the predator population. Between releases, predator-pest dynamics evolve according to a predator-prey model with some fairly general properties: the pest population grows logistically in the absence of predation; the predator functional response is either of Beddington-DeAngelis type or Holling type II; the predator per capita birth rate is bounded above by a constant multiple of the predator functional response; and the predator per capita death rate is allowed to be decreasing in the predator functional response and increasing in the predator population, though the special case in which it is constant is permitted too. We prove that, when the predator functional response is of Beddington-DeAngelis type and the predators are not sufficiently voracious, then the biocontrol program will fail to reduce the pest population below a particular economic threshold, regardless of the frequency or yield of the releases. We prove also that our model possesses a pest-eradication solution, which is both locally and globally stable provided that predators are sufficiently voracious and that releases occur sufficiently often. We establish, curiously, that the pest-eradication solution can be locally stable whilst not being globally stable, the upshot of which is that, if we delay a biocontrol response to a new pest invasion, then this can change the outcome of the response from pest eradication to pest persistence. Finally, we state a number of specific examples for our model, and, for one of these examples, we corroborate parts of our analysis by numerical simulations. Copyright © 2014 Elsevier Inc. All rights reserved.

  7. Nonrandom extinction patterns can modulate pest control service decline.

    PubMed

    Karp, Daniel S; Moeller, Holly V; Frishkoff, Luke O

    2013-06-01

    Changes in biodiversity will mediate the consequences of agricultural intensification and expansion for ecosystem services. Regulating services, like pollination and pest control, generally decline with species loss. In nature, however, relationships between service provision and species richness are not always strong, partially because anthropogenic disturbances purge species from communities in nonrandom orders. The same traits that make for effective service providers may also confer resistance or sensitivity to anthropogenic disturbances, which may either temper or accelerate declines in service provision with species loss. We modeled a community of predators interacting with insect pest prey, and identified the contexts in which pest control provision was most sensitive to species loss. We found pest populations increased rapidly when functionally unique and dietary-generalist predators were lost first, with up to 20% lower pest control provision than random loss. In general, pest abundance increased most in the scenarios that freed more pest species from predation. Species loss also decreased the likelihood that the most effective service providers were present. In communities composed of species with identical traits, predators were equally effective service providers and, when competing predators went extinct, remaining community members assumed their functional roles. In more realistic trait-diverse communities, predators differed in pest control efficacy, and remaining predators could not fully compensate for the loss of their competitors, causing steeper declines in pest control provision with predator species loss. These results highlight diet breadth in particular as a key predictor of service provision, as it affects both the way species respond to and alter their environments. More generally, our model provides testable hypotheses for predicting how nonrandom species loss alters relationships between biodiversity and pest control provision.

  8. Selecting native perennial plants for ecological intensification in Mediterranean greenhouse horticulture.

    PubMed

    Rodríguez, E; González, M; Paredes, D; Campos, M; Benítez, E

    2017-12-04

    Natural control by predators and parasitoids provides an important and often unnoticed ecosystem service to agricultural landscapes by reducing pest populations in crops. The current model of horticultural intensification in south-eastern Spain produces high yields but has also resulted in a landscape almost completely covered by plastic. Promoting natural areas among greenhouses could enhance biodiversity, by being beneficial insects, and reduce pest pressure outdoors. The first step is to ascertain how pests and their natural enemies (NEs) use Mediterranean vegetation for selecting the best plants for pest suppression outdoors. The abundance of the two major horticultural pests, the tobacco whitefly, Bemisia tabaci, and the western flower thrips, Frankliniella occidentalis, together with their NEs, were assayed in 22 flowering perennial plants, which were newly planted in an experimental field surrounded by greenhouses. Eight plant species were identified as the most critical species for sustaining pest populations outdoors. A set of five plant species supported a medium level of pests, and another set of ten plant species supported the lowest level of both pests. Tobacco whitefly occurred in a few plants species, whereas western flower thrips occurred on almost all the plant species studied, and was favoured by the presence of flowers in perennial plants. The results suggest that plant diversity may provide relatively few acceptable host plants for tobacco whitefly than for western flower thrips. NEs were generally collected in plants that also supported abundance of pests, indicating that host/prey availability, more than food resources from flowers, was a stronger predictor of NE abundance in perennial plants. Field trials using the plants with the lowest host acceptance by pests are needed in order to ascertain whether pest abundance outdoors is reduced.

  9. Diversity and population dynamics of pests and predators in irrigated rice fields with treated and untreated pesticide.

    PubMed

    Rattanapun, W

    2012-01-01

    The monitoring of rice pests and their predators in pesticide untreated and treated rice fields was conducted at the southern of Thailand. Twenty-two species in 15 families and 6 orders of rice pests were sampled from untreated rice field. For treated rice field, 22 species in 14 families and 5 orders of rice pest were collected. Regardless of treatment type, dominant species and individual number of rice pest varied to physiological stage of rice. Lepidopteran pests had highest infestation during the vegetative stage of rice growth, while hemipteran pests composed of hopper species (Hemipetra: Auchenorrhyncha) and heteropteran species (Hemiptera: Heteroptera) were dominant groups during the reproductive stage and grain formation and ripening stage of rice growth. In contrast, dominant species of predator did not change throughout rice growing season. There were 35 species in 25 families and seven orders and 40 species in 29 families and seven orders of predators collected from untreated and treated rice field, respectively. Major predators of both rice fields were Micraspis discolor (Fabricius) (Coleoptera: Coccinellidae), Tetragnatha sp. (Araneae: Tetragnathidae) and Agriocnemis pygmaea Rambur (Odonata: Agrionidae). The population dynamic of predators were not related with rice pest population in both treatments. However, the fluctuation of population pattern of rice pests in the untreated treatment were more distinctly synchronized with their predators than that of the treated treatment. There were no significant differences in the total number of rice pest and predator between two treatments at vegetative and reproductive stages of rice growth. Untreated rice field had a higher population number of predator and a lower population number of rice pest than that of treated rice field during grain formation and ripening stages. These results indicated the ago-ecosystem balance in rice fields could be produced through minimal pesticide application, in order to allow the natural balance between pests and their predators to be restored and maintained.

  10. Iterative Code-Aided ML Phase Estimation and Phase Ambiguity Resolution

    NASA Astrophysics Data System (ADS)

    Wymeersch, Henk; Moeneclaey, Marc

    2005-12-01

    As many coded systems operate at very low signal-to-noise ratios, synchronization becomes a very difficult task. In many cases, conventional algorithms will either require long training sequences or result in large BER degradations. By exploiting code properties, these problems can be avoided. In this contribution, we present several iterative maximum-likelihood (ML) algorithms for joint carrier phase estimation and ambiguity resolution. These algorithms operate on coded signals by accepting soft information from the MAP decoder. Issues of convergence and initialization are addressed in detail. Simulation results are presented for turbo codes, and are compared to performance results of conventional algorithms. Performance comparisons are carried out in terms of BER performance and mean square estimation error (MSEE). We show that the proposed algorithm reduces the MSEE and, more importantly, the BER degradation. Additionally, phase ambiguity resolution can be performed without resorting to a pilot sequence, thus improving the spectral efficiency.

  11. Fast and Flexible Successive-Cancellation List Decoders for Polar Codes

    NASA Astrophysics Data System (ADS)

    Hashemi, Seyyed Ali; Condo, Carlo; Gross, Warren J.

    2017-11-01

    Polar codes have gained significant amount of attention during the past few years and have been selected as a coding scheme for the next generation of mobile broadband standard. Among decoding schemes, successive-cancellation list (SCL) decoding provides a reasonable trade-off between the error-correction performance and hardware implementation complexity when used to decode polar codes, at the cost of limited throughput. The simplified SCL (SSCL) and its extension SSCL-SPC increase the speed of decoding by removing redundant calculations when encountering particular information and frozen bit patterns (rate one and single parity check codes), while keeping the error-correction performance unaltered. In this paper, we improve SSCL and SSCL-SPC by proving that the list size imposes a specific number of bit estimations required to decode rate one and single parity check codes. Thus, the number of estimations can be limited while guaranteeing exactly the same error-correction performance as if all bits of the code were estimated. We call the new decoding algorithms Fast-SSCL and Fast-SSCL-SPC. Moreover, we show that the number of bit estimations in a practical application can be tuned to achieve desirable speed, while keeping the error-correction performance almost unchanged. Hardware architectures implementing both algorithms are then described and implemented: it is shown that our design can achieve 1.86 Gb/s throughput, higher than the best state-of-the-art decoders.

  12. Economic impact of stable flies (Diptera: Muscidae) on dairy and beef cattle production.

    PubMed

    Taylor, David B; Moon, Roger D; Mark, Darrell R

    2012-01-01

    Stable flies, Stomoxys calcitrans (L.), are among the most damaging arthropod pests of cattle worldwide. The last estimate of their economic impact on United States cattle production was published 20 yr ago and placed losses at $608 million. Subsequently, several studies of effects of stable flies on beef cattle weight gain and feed efficiency have been published, and stable flies have become increasingly recognized as pests of cattle on pasture and range. We analyzed published studies and developed yield-loss functions to relate stable fly infestation levels to cattle productivity, and then estimated the economic impact of stable flies on cattle production in the United States. Four industry sectors were considered: dairy, cow-calf, pastured stockers, and feeder cattle. In studies reporting stable fly infestation levels of individual herds, median annual per animal production losses were estimated to be 139 kg of milk for dairy cows, and 6, 26, and 9 kg body weight for preweanling calves, pastured stockers, and feeder cattle, respectively. The 200,000 stable flies emerging from an average sized winter hay feeding site reduce annual milk production of 50 dairy cows by an estimated 890 kg and weight gain of 50 preweanling calves, stockers, or feeder cattle by 58, 680, or 84 kg. In 2009 dollars, the value of these losses would be $254, $132, $1,279, or $154, respectively. Using cattle inventories and average prices for 2005-2009, and median monthly infestation levels, national losses are estimated to be $360 million for dairy cattle, $358 million for cow-calf herds, $1,268 million for pastured cattle, and $226 million for cattle on feed, for a total impact to U.S. cattle industries of $2,211 million per year. Excluded from these estimates are effects of stable flies on feed conversion efficiency, animal breeding success, and effects of infested cattle on pasture and water quality. Additional research on the effects of stable flies on high-production dairy cows and nursing beef calves is needed to increase the reliability of the estimates.

  13. A method to estimate the population level of Aceria litchii (Prostigmata: Eriophyidae) and a study of the population dynamics of this species and its predators on litchi trees in southern Brazil.

    PubMed

    De Azevedo, Letícia Henrique; Maeda, Enzo Yuji; Inomoto, Mário Massayuki; De Moraes, Gilberto José

    2014-02-01

    Litchi (Litchi chinensis Sonnerat) is native to Southeast Asia, where most of the world cultivation of this crop is done. Its commercial cultivation in Brazil is recent and concentrated in the state of São Paulo. This crop has been severely damaged in Asia and Brazil by the litchi erineum mite, Aceria litchii (Keifer) (Eriophyidae). The objectives of this study were the adaptation of a method to estimate the density of A. litchii, an evaluation of the population dynamics of this pest and of its associated predators in the state of São Paulo, and an estimation of its injury levels to litchi trees. To estimate the density of A. litchii, an adaptation of a method commonly used to evaluate nematode densities in plant roots was performed. This method was shown to be adequate for the estimation of the number of A. litchii, and it might also be useful for similar evaluations of other erineum forming mites. Field samples to determine the pest population dynamics were collected monthly from August 2011 to July 2012. Sampled leaves were examined under a stereomicroscope for removal of predators and subsequent extraction ofA. litchii by the adapted method. A. litchii reached maximum densities in November 2011 and June 2012, being found at low densities between January and March 2012. The pattern of variation of A. litchii injury levels was similar to that of the density of A. litchii. The main predatory mite co-occurring with A. litchii was the phytoseiid Phytoseius intermedius Evans and McFarlane. However, high injury levels due toA. litchii suggest that the predator was unable to prevent visible damages to the trees, indicating that control activities should be adopted by growers.

  14. 7 CFR 330.210 - Packing materials and containers for plant pest movement; host materials.

    Code of Federal Regulations, 2011 CFR

    2011-01-01

    ... REGULATIONS; GENERAL; PLANT PESTS; SOIL, STONE, AND QUARRY PRODUCTS; GARBAGE Movement of Plant Pests § 330.210... through the United States, or interstate, must be free of soil, except when the Deputy Administrator approves in the permit the movement of soil with the plant pest. Subject to this exception, only approved...

  15. 7 CFR 330.210 - Packing materials and containers for plant pest movement; host materials.

    Code of Federal Regulations, 2010 CFR

    2010-01-01

    ... REGULATIONS; GENERAL; PLANT PESTS; SOIL, STONE, AND QUARRY PRODUCTS; GARBAGE Movement of Plant Pests § 330.210... through the United States, or interstate, must be free of soil, except when the Deputy Administrator approves in the permit the movement of soil with the plant pest. Subject to this exception, only approved...

  16. 7 CFR 330.210 - Packing materials and containers for plant pest movement; host materials.

    Code of Federal Regulations, 2014 CFR

    2014-01-01

    ... REGULATIONS; GENERAL; PLANT PESTS; SOIL, STONE, AND QUARRY PRODUCTS; GARBAGE Movement of Plant Pests § 330.210... through the United States, or interstate, must be free of soil, except when the Deputy Administrator approves in the permit the movement of soil with the plant pest. Subject to this exception, only approved...

  17. 7 CFR 330.210 - Packing materials and containers for plant pest movement; host materials.

    Code of Federal Regulations, 2012 CFR

    2012-01-01

    ... REGULATIONS; GENERAL; PLANT PESTS; SOIL, STONE, AND QUARRY PRODUCTS; GARBAGE Movement of Plant Pests § 330.210... through the United States, or interstate, must be free of soil, except when the Deputy Administrator approves in the permit the movement of soil with the plant pest. Subject to this exception, only approved...

  18. 7 CFR 330.210 - Packing materials and containers for plant pest movement; host materials.

    Code of Federal Regulations, 2013 CFR

    2013-01-01

    ... REGULATIONS; GENERAL; PLANT PESTS; SOIL, STONE, AND QUARRY PRODUCTS; GARBAGE Movement of Plant Pests § 330.210... through the United States, or interstate, must be free of soil, except when the Deputy Administrator approves in the permit the movement of soil with the plant pest. Subject to this exception, only approved...

  19. Safe, Effective Use of Pesticides, A Manual for Commercial Applicators: Vegetable Pests.

    ERIC Educational Resources Information Center

    Cress, D.; And Others

    This manual is intended to assist pesticide applicators in vegetable crops prepare for certification under the Michigan Pesticide Control Act of 1976. The primary focus of this publication is on vegetable pest control. The three sections presented describe: (1) Insect pests of vegetable crops; (2) Weed pests of vegetable crops; and (3) Causes of…

  20. 75 FR 12171 - Notice of Availability of a Draft Pest Risk Assessment on Honey Bees Imported from Australia

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-03-15

    ...] Notice of Availability of a Draft Pest Risk Assessment on Honey Bees Imported from Australia AGENCY... evaluation of the pest risks associated with the importation of honey bees from Australia. The draft pest... States from Australia after concerns that exotic honey bee pathogens or parasites may have been...

  1. 75 FR 5034 - Determination of Pest-Free Areas in the Republic of Chile; Request for Comments

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-02-01

    ...] Determination of Pest-Free Areas in the Republic of Chile; Request for Comments AGENCY: Animal and Plant Health... from the government of the Republic of Chile to recognize additional areas as pest-free areas for... has determined that these areas meet the criteria in our regulations for recognition as pest-free...

  2. 78 FR 41908 - Plants for Planting Whose Importation Is Not Authorized Pending Pest Risk Analysis; Notice of...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2013-07-12

    ... Pending Pest Risk Analysis; Notice of Availability of Data Sheets for Taxa of Plants for Planting That Are... planting whose importation is not authorized pending pest risk analysis. This action will allow interested... our lists of plants for planting whose importation is not authorized pending pest risk analysis...

  3. 75 FR 36347 - Determination of Pest-Free Areas in Mendoza Province, Argentina; Request for Comments

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-06-25

    ...] Determination of Pest-Free Areas in Mendoza Province, Argentina; Request for Comments AGENCY: Animal and Plant... received a request from the Government of Argentina to recognize additional areas as pest- free areas for... determined that these areas meet the criteria in our regulations for recognition as pest-free areas. We are...

  4. Safe, Effective Use of Pesticides, A Manual for Commercial Applicators: Aquatic Pest Control.

    ERIC Educational Resources Information Center

    Extension Service (USDA), Washington, DC.

    This manual is intended to assist pesticide applicators in the area of aquatic pest control meet the requirements of the Michigan Department of Agriculture for certification. The Environmental Protection Agency (EPA) Aquatic Pest Control Guide served as a basis for this manual. The six sections presented describe: (1) Aquatic pest control; (2)…

  5. Integrated Pest Management, Preliminary. Curriculum Guide and Instructional Materials for a Secondary School Vo-Ag Program.

    ERIC Educational Resources Information Center

    Grady County Board of Education, Cairo, GA.

    This curriculum guide presents methods to disseminate information to students interested in dealing with pests, or who have concerns about the environmental impacts of modern pest control methods. Options are encouraged for pest control methods using a combination of natural, biological, cultural, and chemical means of control. Specifically…

  6. Are Schools Making the Grade? School Districts Nationwide Adopt Safer Pest Management Policies.

    ERIC Educational Resources Information Center

    Piper, Cortney; Owens, Kagan

    2002-01-01

    This report documents school districts that have adopted safer pest management policies, such as integrated pest management (IPM), in response to state requirements or as a voluntary measure that exceeds state law. It also documents the state of local school pest management policies and illustrates the opportunities that exist for better…

  7. Bug Off: A Guide for Integrated Pest Management in Granville Schools.

    ERIC Educational Resources Information Center

    2001

    This guide describes options for the Granville schools when dealing with pests. It is based on Integrated Pest Management (IPM), a philosophy that employs safe and practical pest control methods. The guide can be used to incorporate IPM philosophy into the school systems. The first section provides the environmental context for an interest in…

  8. Forest pest management in a changing world

    Treesearch

    Andrew M. Liebhold

    2012-01-01

    The scope, context and science guiding forest pest management have evolved and are likely to continue changing into the future. Here, I present six areas of advice to guide practitioners in the implementation of forest pest management. First, human dimensions will continue to play a key role in most pest problems and should always be a primary consideration in...

  9. Pest risk maps for invasive alien species: a roadmap for improvement

    Treesearch

    Robert C. Venette; Darren J. Kriticos; Roger D. Magarey; Frank H. Koch; Richard H. A. Baker; Susan P. Worner; Nadila N. Gomez Raboteaux; Daniel W. McKenney; Erhard J. Dobesberger; Denys Yemshanov; Paul J. De Barro; William D. Hutchinson; Glenn Fowler; Tom M. Kalaris; John Pedlar

    2010-01-01

    Pest risk maps are powerful visual communication tools to describe where invasive alien species might arrive, establish, spread, or cause harmful impacts. These maps inform strategic and tactical pest management decisions, such as potential restrictions on international trade or the design of pest surveys and domestic quarantines. Diverse methods are available to...

  10. Chemical environment manipulation for pest insects control

    NASA Astrophysics Data System (ADS)

    Greenblatt, J. A.; Lewis, W. J.

    1983-01-01

    The chemical environment of pest species may be considered a habitat susceptible to management Management may be by means of manipulation of the environment of the pest for population suppression or for enhancement of natural enemies Examples of each are reviewed here Chemical stimuli influencing the behavior of phytophagous insects include host plant originated stimuli and pheromones The latter, especially sex pheromones, have proved most successful as tools for manipulation of pest population dynamics Factors influencing search behavior of natural enemies include habitat characteristics such as crop, associated plants and plant assemblages, host plant characteristics, influence of associated organisms, and characteristics of the searching entomophage Recent studies have shown potential for simultaneous management of a pest species and enhancement of natural enemies using pest pheromones

  11. Tissue-specific Proteogenomic Analysis of Plutella xylostella Larval Midgut Using a Multialgorithm Pipeline.

    PubMed

    Zhu, Xun; Xie, Shangbo; Armengaud, Jean; Xie, Wen; Guo, Zhaojiang; Kang, Shi; Wu, Qingjun; Wang, Shaoli; Xia, Jixing; He, Rongjun; Zhang, Youjun

    2016-06-01

    The diamondback moth, Plutella xylostella (L.), is the major cosmopolitan pest of brassica and other cruciferous crops. Its larval midgut is a dynamic tissue that interfaces with a wide variety of toxicological and physiological processes. The draft sequence of the P. xylostella genome was recently released, but its annotation remains challenging because of the low sequence coverage of this branch of life and the poor description of exon/intron splicing rules for these insects. Peptide sequencing by computational assignment of tandem mass spectra to genome sequence information provides an experimental independent approach for confirming or refuting protein predictions, a concept that has been termed proteogenomics. In this study, we carried out an in-depth proteogenomic analysis to complement genome annotation of P. xylostella larval midgut based on shotgun HPLC-ESI-MS/MS data by means of a multialgorithm pipeline. A total of 876,341 tandem mass spectra were searched against the predicted P. xylostella protein sequences and a whole-genome six-frame translation database. Based on a data set comprising 2694 novel genome search specific peptides, we discovered 439 novel protein-coding genes and corrected 128 existing gene models. To get the most accurate data to seed further insect genome annotation, more than half of the novel protein-coding genes, i.e. 235 over 439, were further validated after RT-PCR amplification and sequencing of the corresponding transcripts. Furthermore, we validated 53 novel alternative splicings. Finally, a total of 6764 proteins were identified, resulting in one of the most comprehensive proteogenomic study of a nonmodel animal. As the first tissue-specific proteogenomics analysis of P. xylostella, this study provides the fundamental basis for high-throughput proteomics and functional genomics approaches aimed at deciphering the molecular mechanisms of resistance and controlling this pest. © 2016 by The American Society for Biochemistry and Molecular Biology, Inc.

  12. Detection and evolution of resistance to the pyrethroid cypermethrin in Helicoverpa zea (Lepidoptera: Noctuidae) populations in Texas.

    PubMed

    Pietrantonio, P V; Junek, T A; Parker, R; Mott, D; Siders, K; Troxclair, N; Vargas-Camplis, J; Westbrook, J K; Vassiliou, V A

    2007-10-01

    The bollworm, Helicoverpa zea (Boddie), is a key pest of cotton in Texas. Bollworm populations are widely controlled with pyrethroid insecticides in cotton and exposed to pyrethroids in other major crops such as grain sorghum, corn, and soybeans. A statewide program that evaluated cypermethrin resistance in male bollworm populations using an adult vial test was conducted from 2003 to 2006 in the major cotton production regions of Texas. Estimated parameters from the most susceptible field population currently available (Burleson County, September 2005) were used to calculate resistance ratios and their statistical significance. Populations from several counties had statistically significant (P < or = 0.05) resistance ratios for the LC(50), indicating that bollworm-resistant populations are widespread in Texas. The highest resistance ratios for the LC(50) were observed for populations in Burleson County in 2000 and 2003, Nueces County in 2004, and Williamson and Uvalde Counties in 2005. These findings explain the observed pyrethroid control failures in various counties in Texas. Based on the assumption that resistance is caused by a single gene, the Hardy-Weinberg equilibrium formula was used for estimation of frequencies for the putative resistant allele (q) using 3 and 10 microg/vial as discriminatory dosages for susceptible and heterozygote resistant insects, respectively. The influence of migration on local levels of resistance was estimated by analysis of wind trajectories, which partially clarifies the rapid evolution of resistance to cypermethrin in bollworm populations. This approach could be used in evaluating resistance evolution in other migratory pests.

  13. Peste des Petits Ruminants (PPR) in Ethiopia: Analysis of a national serological survey

    PubMed Central

    Waret-Szkuta, Agnès; Roger, François; Chavernac, David; Yigezu, Laikemariam; Libeau, Geneviève; Pfeiffer, Dirk U; Guitián, Javier

    2008-01-01

    Background Peste des petits ruminants (PPR) is a contagious viral disease of small ruminants in Africa and Asia. In 1999, probably the largest survey on PPR ever conducted in Africa was initiated in Ethiopia where 13 651 serum samples from 7 out of the 11 regions were collected and analyzed by competitive enzyme-linked immunosorbent assay (cELISA). The objective of this paper is to present the results of this survey and discuss their practical implications for PPR-endemic regions. Methods We explored the spatial distribution of PPR in Ethiopia and we investigated risk factors for positive serological status. Intracluster correlation coefficients (ρ), were calculated for 43 wereda (administrative units). Results Seroprevalence was very heterogeneous across regions and even more across wereda, with prevalence estimates ranging from 0% to 52.5%. Two groups of weredas could be distinguished on the basis of the estimated ρ: a group with very low ρ (ρ < 0.12) and a group with very high ρ (ρ > 0.37). Conclusion The results indicate that PPRV circulation has been very heterogeneous, the values for the ρ may reflect the endemic or epidemic presence of the virus or the various degrees of mixing of animals in the different areas and production systems. Age appears as a risk factor for seropositive status, the linear effect seeming to confirm in the field that PPRV is highly immunogenic. Our estimates of intracluster correlation may prove useful in the design of serosurveys in other countries where PPR is of importance. PMID:18786275

  14. The effect of cost construction based on either DRG or ICD-9 codes or risk group stratification on the resulting cost-effectiveness ratios.

    PubMed

    Chumney, Elinor C G; Biddle, Andrea K; Simpson, Kit N; Weinberger, Morris; Magruder, Kathryn M; Zelman, William N

    2004-01-01

    As cost-effectiveness analyses (CEAs) are increasingly used to inform policy decisions, there is a need for more information on how different cost determination methods affect cost estimates and the degree to which the resulting cost-effectiveness ratios (CERs) may be affected. The lack of specificity of diagnosis-related groups (DRGs) could mean that they are ill-suited for costing applications in CEAs. Yet, the implications of using International Classification of Diseases-9th edition (ICD-9) codes or a form of disease-specific risk group stratification instead of DRGs has yet to be clearly documented. To demonstrate the implications of different disease coding mechanisms on costs and the magnitude of error that could be introduced in head-to-head comparisons of resulting CERs. We based our analyses on a previously published Markov model for HIV/AIDS therapies. We used the Healthcare Cost and Utilisation Project Nationwide Inpatient Sample (HCUP-NIS) data release 6, which contains all-payer data on hospital inpatient stays from selected states. We added costs for the mean number of hospitalisations, derived from analyses based on either DRG or ICD-9 codes or risk group stratification cost weights, to the standard outpatient and prescription drug costs to yield an estimate of total charges for each AIDS-defining illness (ADI). Finally, we estimated the Markov model three times with the appropriate ADI cost weights to obtain CERs specific to the use of either DRG or ICD-9 codes or risk group. Contrary to expectations, we found that the choice of coding/grouping assumptions that are disease-specific by either DRG codes, ICD-9 codes or risk group resulted in very similar CER estimates for highly active antiretroviral therapy. The large variations in the specific ADI cost weights across the three different coding approaches was especially interesting. However, because no one approach produced consistently higher estimates than the others, the Markov model's weighted cost per event and resulting CERs were remarkably close in value to one another. Although DRG codes are based on broader categories and contain less information than ICD-9 codes, in practice the choice of whether to use DRGs or ICD-9 codes may have little effect on the CEA results in heterogeneous conditions such as HIV/AIDS.

  15. Approaches in highly parameterized inversion - GENIE, a general model-independent TCP/IP run manager

    USGS Publications Warehouse

    Muffels, Christopher T.; Schreuder, Willem A.; Doherty, John E.; Karanovic, Marinko; Tonkin, Matthew J.; Hunt, Randall J.; Welter, David E.

    2012-01-01

    GENIE is a model-independent suite of programs that can be used to generally distribute, manage, and execute multiple model runs via the TCP/IP infrastructure. The suite consists of a file distribution interface, a run manage, a run executer, and a routine that can be compiled as part of a program and used to exchange model runs with the run manager. Because communication is via a standard protocol (TCP/IP), any computer connected to the Internet can serve in any of the capacities offered by this suite. Model independence is consistent with the existing template and instruction file protocols of the widely used PEST parameter estimation program. This report describes (1) the problem addressed; (2) the approach used by GENIE to queue, distribute, and retrieve model runs; and (3) user instructions, classes, and functions developed. It also includes (4) an example to illustrate the linking of GENIE with Parallel PEST using the interface routine.

  16. Atmospheric Chemistry of Neonicotinoids Used in Urban Areas

    NASA Astrophysics Data System (ADS)

    Finlayson-Pitts, B. J.; Aregahegn, K.; Shemesh, D.; Gerber, R. B.

    2016-12-01

    Neonicotinoid (NN) pesticides are used extensively in both urban and agricultural settings to control sucking pests such as aphids, as well as for flea control for domestic pets. As a result, they are commonly found on surfaces that are exposed to the atmosphere. Imidacloprid (IMD) is one of the major NNs in pest control formulations. While there have been a number of studies of IMD reactions in solution, there are relatively few surface reactions that are relevant to atmospheric exposures. We report here laboratory studies of the photochemistry of IMD on surfaces in which quantum yields are measured and combined with absorption cross sections to estimate tropospheric lifetimes with respect to photolysis. Products identified using a combination of ATR-FTIR, DART-MS and ESI-MS include the desnitro and urea derivatives in the solid, and N2O in the gas phase. Quantum chemical calculations suggest a mechanism for the photolysis and production of these products. The implications for altering toxicity through atmospheric reactions will be discussed.

  17. Causes of Death Data in the Global Burden of Disease Estimates for Ischemic and Hemorrhagic Stroke

    PubMed Central

    Truelsen, Thomas; Krarup, Lars-Henrik; Iversen, Helle; Mensah, George A.; Feigin, Valery; Sposato, Luciano; Naghavi, Mohsen

    2015-01-01

    Background Stroke mortality estimates in the Global Burden of Disease (GBD) study are based on routine mortality statistics and redistribution of ill-defined codes that cannot be a cause of death, the so-called “garbage codes”. This study describes the contribution of these codes to stroke mortality estimates. Methods All available mortality data were compiled and non-specific cause codes were redistributed based on literature review and statistical methods. Ill-defined codes were redistributed to their specific cause of disease by age, sex, country, and year. The reassignment was done based on the international classification of diseases and the pathology behind each code by checking multiple causes of death and literature review. Results Unspecified stroke, and primary and secondary hypertension are leading contributing “garbage codes” to stroke mortality estimates for intracranial hemorrhagic stroke and ischemic stroke. There were marked differences in the fraction of death assigned to ischemic stroke and hemorrhagic stroke for unspecified stroke and hypertension between GBD regions and between age groups. Conclusions A large proportion of stroke fatalities is derived from the redistribution of “unspecified stroke” and “hypertension” with marked regional differences. Future advancements in stroke certification, data collections, and statistical analyses may improve the estimation of the global stroke burden. PMID:26505189

  18. Neoseiulus californicus (Acari: Phytoseiidae) as a potential control agent of Tetranychus urticae (Acari: Tetranychidae): effect of pest/predator ratio on pest abundance on strawberry.

    PubMed

    Greco, Nancy M; Sánchez, Norma E; Liljesthröm, Gerardo G

    2005-01-01

    Neoseiulus californicus (McGregor) is a promising agent for successful Tetranychus urticae Koch control through conservation techniques, in strawberry crops in La Plata (Buenos Aires, Argentina). In prey-predator interaction, initial relative densities have an important effect on system dynamics. The economic threshold level (ETL) used for this pest in the present study was 50 active mites per leaflet. In our laboratory experiments, initial T. urticae to N. californicus ratio had a significant effect on the population abundance of T. urticae at a 7-day period. When pest/predator ratio was 5/1 (at initial pest densities from 5 to 15 females/leaflet) the final number of active T. urticae/leaflet was significantly lower than the ETL, while at 20 females/leaflet this number did not differ from the ETL. At 7.5/1 ratio, the final number of active T. urticae/leaflet, at initial pest densities from 5 to 15 females/leaflet, reached the ETL without surpassing it. At 10/1 and 15/1 ratios, pest densities exceeded the ETL only at 15 initial T. urticae/leaflet. Most greenhouse and field observations were consistent with the predictions of a graphical model based on experimental results. This predator was very effective in limiting pest densities at a 7-day period and within the range of pest-predator ratios and absolute densities used in this study. Conservation of N. californicus promoting favorable pest/predator ratios may result in early control of T. urticae.

  19. Pest Prevalence and Evaluation of Community-Wide Integrated Pest Management for Reducing Cockroach Infestations and Indoor Insecticide Residues.

    PubMed

    Zha, Chen; Wang, Changlu; Buckley, Brian; Yang, Ill; Wang, Desen; Eiden, Amanda L; Cooper, Richard

    2018-04-02

    Pest infestations in residential buildings are common, but community-wide pest survey data are lacking. Frequent insecticide applications for controlling indoor pests leave insecticide residues and pose potential health risks to residents. In this study, a community-wide pest survey was carried out in a housing complex consisting of 258 units in 40 buildings in New Brunswick, New Jersey. It was immediately followed by implementation of an integrated pest management (IPM) program in all the cockroach-infested apartments and two bed bug apartments with the goal of eliminating pest infestations, reducing pyrethroid residues, and increasing resident satisfaction with pest control services. The IPM-treated apartments were revisited and treated biweekly or monthly for 7 mo. Initial inspection found the top three pests and their infestation rates to be as follows: German cockroaches (Blattella germanica L. [Blattodea: Blattellidae]), 28%; rodents, 11%; and bed bugs (Cimex lectularius L. [Hemiptera: Cimicidae]), 8%. Floor wipe samples were collected in the kitchens and bedrooms of 20 apartments for pyrethroid residue analysis before the IPM implementation; 17 of the 20 apartments were resampled again at 7 mo. The IPM program reduced cockroach counts per apartment by 88% at 7 wk after initial treatment. At 7 mo, 85% of the cockroach infestations found in the initial survey were eliminated. The average number of pyrethroids detected decreased significantly from 6 ± 1 (mean ± SEM) and 5 ± 1 to 2 ± 1 and 3 ± 1 in the kitchens and bedrooms, respectively. The average concentrations of targeted pyrethroids residue also decreased significantly in the kitchens and bedrooms.

  20. Quantifying secondary pest outbreaks in cotton and their monetary cost with causal-inference statistics.

    PubMed

    Gross, Kevin; Rosenheim, Jay A

    2011-10-01

    Secondary pest outbreaks occur when the use of a pesticide to reduce densities of an unwanted target pest species triggers subsequent outbreaks of other pest species. Although secondary pest outbreaks are thought to be familiar in agriculture, their rigorous documentation is made difficult by the challenges of performing randomized experiments at suitable scales. Here, we quantify the frequency and monetary cost of secondary pest outbreaks elicited by early-season applications of broad-spectrum insecticides to control the plant bug Lygus spp. (primarily L. hesperus) in cotton grown in the San Joaquin Valley, California, USA. We do so by analyzing pest-control management practices for 969 cotton fields spanning nine years and 11 private ranches. Our analysis uses statistical methods to draw formal causal inferences from nonexperimental data that have become popular in public health and economics, but that are not yet widely known in ecology or agriculture. We find that, in fields that received an early-season broad-spectrum insecticide treatment for Lygus, 20.2% +/- 4.4% (mean +/- SE) of late-season pesticide costs were attributable to secondary pest outbreaks elicited by the early-season insecticide application for Lygus. In 2010 U.S. dollars, this equates to an additional $6.00 +/- $1.30 (mean +/- SE) per acre in management costs. To the extent that secondary pest outbreaks may be driven by eliminating pests' natural enemies, these figures place a lower bound on the monetary value of ecosystem services provided by native communities of arthropod predators and parasitoids in this agricultural system.

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