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Sample records for exon-primed intron-crossing epic

  1. Developing Exon-Primed Intron-Crossing (EPIC) markers for population genetic studies in three Aedes disease vectors.

    PubMed

    White, Vanessa Linley; Endersby, Nancy Margaret; Chan, Janice; Hoffmann, Ary Anthony; Weeks, Andrew Raymond

    2015-03-01

    Aedes aegypti, Aedes notoscriptus, and Aedes albopictus are important vectors of many arboviruses implicated in human disease such as dengue fever. Genetic markers applied across vector species can provide important information on population structure, gene flow, insecticide resistance, and taxonomy, however, robust microsatellite markers have proven difficult to develop in these species and mosquitoes generally. Here we consider the utility and transferability of 15 Ribosome protein (Rp) Exon-Primed Intron-Crossing (EPIC) markers for population genetic studies in these 3 Aedes species. Rp EPIC markers designed for Ae. aegypti also successfully amplified populations of the sister species, Ae. albopictus, as well as the distantly related species, Ae. notoscriptus. High SNP and good indel diversity in sequenced alleles plus support for amplification of the same regions across populations and species were additional benefits of these markers. These findings point to the general value of EPIC markers in mosquito population studies.

  2. Teaching the Epic.

    ERIC Educational Resources Information Center

    Fleming, Margaret, Ed.

    Assembled to aid high school literature teachers in exploring the epic with their students, materials in this book approach the epic as a product of a specific culture which presents vivid pictures of earlier societies. Following the introduction and the opening essay, "The Role of the Supernatural in the Epic," chapters are grouped under the…

  3. EPIC Computer Upgrade

    NASA Video Gallery

    Expedition 30 Commander Dan Burbank and Flight Engineer Don Pettit work on installing hardware for the Enhanced Processor and Integrated Communications (EPIC) upgrade of the International Space Sta...

  4. American Epic: Then and Now.

    ERIC Educational Resources Information Center

    Glazer, Nathan

    1998-01-01

    Argues that the epic of America as frontier and vast land of freedom has been replaced by an epic that emphasizes racial and ethnic diversity in America, whether in an optimistic or pessimistic mood. The old epic was connected with an available frontier, but the new epic is city-centered in the stories of minorities. (SLD)

  5. EPIC/JANUS user's guide

    SciTech Connect

    Not Available

    1986-07-30

    EPIC/JANUS, the Energy Information Administration's (EIA) Publication and Interactive Composition System, is a software system the allows text, tables, halftones, and graphics to be combined interactively in a single document. In essence, it automates the entire process of composition and production of camera-ready copy. EPIC is a machine-independent document management and translation system developed by EIA. JANUS is an interactive document composition system which formats and typesets a document. This User's Guide provides complete information on how to use the EPIC/JANUS system. Included in the discussion are sections on getting started, the EPIC system and EIA Standard Text Codes, EPIC interactive commands, graphics in EPIC/JANUS, tables in EPIC/JANUS, EPIC Error messages, MVS and VM listings from EPIC/JANUS, using JANUS interactively, mathematical formula, and producing EPIC/JANUS publications through a displaywriter. Appendices contain a quick reference guide to text codes and text code examples. (DWL)

  6. EPICS-DDS

    SciTech Connect

    Malitsky,N.; Shah, J.; Hasabnis, N.

    2009-05-04

    This paper presents a new extension to EPICS, approaching the Data Distributed Service (DDS) interface based on the Channel Access protocol. DDS is the next generation of middleware industrial standards, bringing a data-centric publish-subscribe paradigm to distributed control systems. In comparison with existing middleware technologies, the data-centric approach is able to provide a consistent consolidated model supporting difference data dissemination scenarios and integrating many important issues, such as quality of service, user-specific data structures, and others. The paper considers different features of the EPICS-DDS layer in the context of the high-level accelerator environment.

  7. EPIC'S PRODUCTS AND SERVICES

    EPA Science Inventory

    EPIC completes approximately 150 site characterizations annually using current and historical aerial photographs. This work is done in support of EPA Regional and Program
    offices. Site characterization provides detailed information about a site and its history, often going ba...

  8. The Owens Valley Epics

    ERIC Educational Resources Information Center

    Bahr, Donald

    2007-01-01

    One of the best-studied, least-discussed texts of Native American oral literature is a long Mojave "epic" taken down from a man named Inyo-kutavere by Alfred Kroeber in 1902 and published in 1951. The text was published in twenty-nine pages along with forty-eight pages of commentary and twenty-five pages of notes. In 1999, Arthur Hatto, an…

  9. Extrasolar Planetary Imaging Coronagraph (EPIC)

    NASA Astrophysics Data System (ADS)

    Clampin, Mark

    2009-01-01

    The Extrasolar Planetary Imaging Coronagraph (EPIC) is a proposed NASA Exoplanet Probe mission to image and characterize extrasolar giant planets. EPIC will provide insights into the physical nature and architecture of a variety of planets in other solar systems. Initially, it will detect and characterize the atmospheres of planets identified by radial velocity surveys, determine orbital inclinations and masses and characterize the atmospheres around A and F type stars which cannot be found with RV techniques. It will also observe the inner spatial structure of exozodiacal disks. EPIC has a heliocentric Earth trailing drift-away orbit, with a 5 year mission lifetime. The robust mission design is simple and flexible ensuring mission success while minimizing cost and risk. The science payload consists of a heritage optical telescope assembly (OTA), and visible nulling coronagraph (VNC) instrument. The instrument achieves a contrast ratio of 10^9 over a 5 arcsecond field-of-view with an unprecedented inner working angle of 0.13 arcseconds over the spectral range of 440-880 nm. The telescope is a 1.65 meter off-axis Cassegrain with an OTA wavefront error of lambda/9, which when coupled to the VNC greatly reduces the requirements on the large scale optics.

  10. EPICS release 3.11 specific documentation -- EPICS release notes for 3.11

    SciTech Connect

    1994-01-19

    EPICS release 3.11 is now ready for user testing. A person who wants to set up a simplified application environment to boot an IOC and create databases using R3.11 should follow the directions in Appendix B, page 27, of the EPICS Source/Release Control Manual, Sept. 20, 1993. The R3.11 EPICS path at ANL/APS is /net/phebos/epics/R3.11 so the command to get the new release is /net/phebos/epics/R3.11/Unix/share/bin/getrel /net/phebos/epics/R3.11. An existing R3.8 short form report can be copied to this new directory and used to create a database. ANL/APS is currently testing an Application Developers Source/Release control system. It is not yet ready for general distribution. Attached are the EPICS R3.11 release notes.

  11. Extrasolar Planetary Imaging Coronagraph (EPIC)

    NASA Astrophysics Data System (ADS)

    Clampin, Mark; Melnick, Gary; Lyon, Richard; Kenyon, Scott; Sasselov, Dimitar; Tolls, Volker; Ford, Holland; Golimowski, David; Petro, Larry; Hartig, George; Sparks, William; Illingworth, Garth; Lin, Doug; Seager, Sara; Weinberger, Alycia; Harwit, Martin; Marley, Mark; Schneider, Jean; Shao, Michael; Levine, Marty; Ge, Jian; Woodruff, Robert

    2006-06-01

    The Extrasolar Planetary Imaging Coronagraph (EPIC) is a proposed NASA Discovery mission to image and characterize extrasolar giant planets in orbits with semi-major axes between 2 and 10 AU. EPIC will provide insights into the physical nature of a variety of planets in other solar systems complimenting radial velocity (RV) and astrometric planet searches. It will detect and characterize the atmospheres of planets identified by radial velocity surveys, determine orbital inclinations and masses, characterize the atmospheres around A and F type stars which cannot be found with RV techniques, and observe the inner spatial structure and colors of debris disks. EPIC has a proposed launch date of 2012 to heliocentric Earth trailing drift-away orbit, with a 3 year mission lifetime (5 year goal), and will revisit planets at least three times at intervals of 9 months. The robust mission design is simple and flexible ensuring mission success while minimizing cost and risk. The science payload consists of a heritage optical telescope assembly (OTA), and visible nulling coronagraph (VNC) instrument. The instrument achieves a contrast ratio of 109 over a 4.84 arcsecond field-of-view with an unprecedented inner working angle of 0.14 arcseconds over the spectral range of 440-880 nm, with spectral resolutions from 10 - 150. The telescope is a 1.5 meter offaxis Cassegrain with an OTA wavefront error of λ/9, which when coupled to the VNC greatly reduces the requirements on the large scale optics, compressing them to stability requirements within the relatively compact VNC optical chain. The VNC features two integrated modular nullers, a spatial filter array (SFA), and an E2V-L3 photon counting CCD. Direct null control is accomplished from the science focal mitigating against complex wavefront and amplitude sensing and control strategies.

  12. EPIC View of Moon Transiting the Earth

    NASA Video Gallery

    This animation features actual satellite images of the far side of the moon, illuminated by the sun, as it crosses between the DSCOVR spacecraft's Earth Polychromatic Imaging Camera (EPIC) and tele...

  13. Primers for low-copy nuclear genes in Metrosideros and cross-amplification in Myrtaceae1

    PubMed Central

    Pillon, Yohan; Johansen, Jennifer; Sakishima, Tomoko; Chamala, Srikar; Barbazuk, W. Brad; Stacy, Elizabeth A.

    2014-01-01

    • Premise of the study: Primers were developed to amplify low-copy nuclear genes in Hawaiian Metrosideros (Myrtaceae). • Methods and Results: Data from a pooled 454 Titanium run of the partial transcriptomes of four Metrosideros taxa were used to identify the loci of interest. Ten exon-primed intron-crossing (EPIC) markers were amplified and sequenced directly with success in Metrosideros, as well as in a representative selection of Myrtaceae, including Syzygium, Psidium, and Melaleuca for most of the markers. The loci amplified ranged between 500 and 1100 bp, and up to 117 polymorphic sites were observed within an individual gene alignment. Two introns contained microsatellites in some of the species. • Conclusions: These novel primer pairs should be useful for phylogenetic analysis and population genetics of a broad range of Myrtaceae, particularly the diverse fleshy-fruited tribes Syzygieae and Myrteae. PMID:25309837

  14. Bottomless barrel-sponge species in the Indo-Pacific?

    PubMed

    Setiawan, Edwin; Voogd, Nicole J De; Wörheide, Gert; Erpenbeck, Dirk

    2016-01-01

    The use of nuclear markers, in addition to traditional mitochondrial markers, helps to clarify hidden patterns of genetic structure in natural populations (Palumbi & Baker, 1994). This is particularly evident among demosponges that possess slow mitochondrial evolutionary rates compared to Bilateria, where nuclear intron markers can aid in the understanding of shallow level phylogenetic relationships (Shearer et al., 2002). Ideally, these nuclear markers (i) are evolutionary well-conserved across different lineages, (ii) produce amplicons holding a number of sites with sufficient variability to answer the relevant phylogenetic question, (iii) derive from single copy genes (see review in Zhang & Hewitt, 2003). A popular method to amplify intron markers uses EPIC (Exon-Primed, Intron-Crossing) primers that anneal to the more conserved flanking exon regions and subsequently bridge the intron during amplification (Palumbi & Baker, 1994). PMID:27395725

  15. Using micro hardware to integrate EPICS and SPEC.

    SciTech Connect

    Walko, D. A.; X-Ray Science Division

    2007-11-11

    This paper describes the steps needed to use SPEC's 'macro hardware facility' for control and reading of EPICS process variables. This resource allows many instruments that can communicate with EPICS to be integrated into the SPEC diffractometer-control program.

  16. Epic Flooding in Georgia, 2009

    USGS Publications Warehouse

    Gotvald, Anthony J.; McCallum, Brian E.

    2010-01-01

    Metropolitan Atlanta-September 2009 Floods * The epic floods experienced in the Atlanta area in September 2009 were extremely rare. Eighteen streamgages in the Metropolitan Atlanta area had flood magnitudes much greater than the estimated 0.2-percent (500-year) annual exceedance probability. * The Federal Emergency Management Agency (FEMA) reported that 23 counties in Georgia were declared disaster areas due to this flood and that 16,981 homes and 3,482 businesses were affected by floodwaters. Ten lives were lost in the flood. The total estimated damages exceed $193 million (H.E. Longenecker, Federal Emergency Management Agency, written commun., November 2009). * On Sweetwater Creek near Austell, Ga., just north of Interstate 20, the peak stage was more than 6 feet higher than the estimated peak stage of the 0.2-percent (500-year) flood. Flood magnitudes in Cobb County on Sweetwater, Butler, and Powder Springs Creeks greatly exceeded the estimated 0.2-percent (500-year) floods for these streams. * In Douglas County, the Dog River at Ga. Highway 5 near Fairplay had a peak stage nearly 20 feet higher than the estimated peak stage of the 0.2-percent (500-year) flood. * On the Chattahoochee River, the U.S. Geological Survey (USGS) gage at Vinings reached the highest level recorded in the past 81 years. Gwinnett, De Kalb, Fulton, and Rockdale Counties also had record flooding. South Georgia March and April 2009 Floods * The March and April 2009 floods in South Georgia were smaller in magnitude than the September floods but still caused significant damage. * No lives were lost in this flood. Approximately $60 million in public infrastructure damage occurred to roads, culverts, bridges and a water treatment facility (Joseph T. McKinney, Federal Emergency Management Agency, written commun., July 2009). * Flow at the Satilla River near Waycross, exceeded the 0.5-percent (200-year) flood. Flows at seven other stations in South Georgia exceeded the 1-percent (100-year) flood.

  17. 77 FR 73655 - Epic Marketplace, Inc., and Epic Media Group, LLC; Analysis of Proposed Consent Order To Aid...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2012-12-11

    ... (``EMG''). Epic acts as an intermediary between Web site owners who publish advertisements on their Web... purposes. The FTC's complaint charges that Epic and EMG violated Section 5(a) of the FTC Act by falsely... prevent Epic; EMG; their parent company FAS Labs, Inc.; and any of their subsidiaries, successors,...

  18. Education for Change: Epic Charter School

    ERIC Educational Resources Information Center

    EDUCAUSE, 2015

    2015-01-01

    The student-centered school model of Epic Charter School in Oakland, California, framed around a hero's journey empowers middle school students with sense of unity and purpose in life, where they can feel part of a culture with a shared experience and with more opportunities to experiences growth and accomplishment. Design and engineering is front…

  19. The success and the future of EPICS

    SciTech Connect

    Thuot, M.E., Dalesio, L.R.; Clausen, M.; Katoh, T.

    1996-09-01

    During the past 5 years, the control system software toolkit EPICS (Experimental Physics and Industrial Control System) has developed from a small code co-development effort between LANL and ANL into an international collaboration on real-time distributed control system (for an accelerator facility, etc.). The wide application of this set of tools is the result of a combination of high performance, scaleable distributed control, and well defined open interfaces between system layers that encourage users to add extensions. These extensions can subsequently be reused by others, adding to the utility of the tools. This paper describes the architectural features that have supported these extensions, some of the new extensions produced by the 58 projects currently using EPICS and some of the new functions and interfaces being planned to be added to this control system toolkit.

  20. The success and the future of EPICS

    SciTech Connect

    M.E. Thuot; M. Clausen; L.R. Dalesio; T. Katoh; M.R. Kraimer; R. Mueller; H. Shoaee; W.A. Watson

    1996-08-01

    During the past five years, the control system software toolkit called EPICS (Experimental Physics and Industrial Control System), has developed from a comparatively small code co-development effort between Los Alamos National Laboratory and Argonne National Laboratory into an international collaboration on real-time distributed control systems. The wide application of this set of tools is the result of a combination of high performance, scaleable distributed control and well defined open interfaces between system layers that encourage users to add extensions. These extensions can subsequently be reused by others, adding to the utility of the tools. This paper will describe the architectural features that have supported these extensions, some of the new extensions produced by the 58 projects currently using EPICS and some of the new functions and interfaces we are planning to add to this control system toolkit.

  1. EPICS: Experimental Physics and Industrial Control System

    NASA Astrophysics Data System (ADS)

    Epics Development Team

    2013-02-01

    EPICS is a set of software tools and applications developed collaboratively and used to create distributed soft real-time control systems for scientific instruments such as particle accelerators and telescopes. Such distributed control systems typically comprise tens or even hundreds of computers, networked together to allow communication between them and to provide control and feedback of the various parts of the device from a central control room, or even remotely over the internet. EPICS uses Client/Server and Publish/Subscribe techniques to communicate between the various computers. A Channel Access Gateway allows engineers and physicists elsewhere in the building to examine the current state of the IOCs, but prevents them from making unauthorized adjustments to the running system. In many cases the engineers can make a secure internet connection from home to diagnose and fix faults without having to travel to the site. EPICS is used by many facilities worldwide, including the Advanced Photon Source at Argonne National Laboratory, Fermilab, Keck Observatory, Laboratori Nazionali di Legnaro, Brazilian Synchrotron Light Source, Los Alamos National Laboratory, Australian Synchrotron, and Stanford Linear Accellerator Center.

  2. EPICS Version 4 - Implementing Complex Data Types

    SciTech Connect

    Marty Kraimer,; John dalesio

    2012-11-27

    Through phase 1 and phase 2 SBIR grants, s fully functional I/O Controller and communication protocol for version 4 of EPICS is completed. This new software architecture provides a flexible and extendible architecture. Version 4 is implemented fully in Java. The performance metrics look promising. The final portion of phase 2 is to optimize the communication mechanisms. Subsequent work on different aspects of this are required to provide a viable solutions in various areas. Version 3 of EPICS is able to provide a platform for implementing channel based control, because the channel and attributes for time stamping, alarm, display and control were narrow, well defined, and complete. To extend EPICS functionality beyond this, it is necessary to define attributes needed for archive data, array, image data, and directory services. The proper handling of several array types enables the development of middle layer servers such as orbit and bump control in accelerators. Phase 1 should produce a well defined, reviewed, and agreed upon definition of the metadata required for these services. A Phase 2 grant would provide tools that implemented archiving, general array, imaging, and directory applications.

  3. Modular Curriculum: English. Comparative Literature: The Epic Tradition.

    ERIC Educational Resources Information Center

    Watkins, Barbara; Wiley, Shirley

    This independent course of study is designed to be completed within a one-year period. The course centers on the epic tradition, analyzing several well-known epics and comparing them from a critic's point of view. It is emphasized that many aspects of the course involve questions for which there are no ready answers. The introductions following…

  4. AN OVERVIEW OF EPA ENVIRONMENTAL PHOTOGRAPHIC INTERPRETATION CENTER (EPIC)

    EPA Science Inventory



    The EPA Environmental Photographic Interpretation Center (EPIC) supports the EPA Regions and Program Offices with remote sensing based technical support and research and development products. Since 1972, EPIC has provided both imagery and imagery-derived products to the E...

  5. Evaluation Report: The EPIC Leadership Development Model and Pilot Programs

    ERIC Educational Resources Information Center

    New Leaders (NJ1), 2011

    2011-01-01

    New Leaders created the Effective Practice Incentive Community (EPIC) initiative in 2006 to learn from educators driving achievement gains in high-need urban schools. EPIC identifies school leaders and teachers whose students are making significant achievement gains and financially rewards these educators in exchange for sharing and documenting…

  6. The EPIC Leadership Development Program Evaluation Report. Research Brief

    ERIC Educational Resources Information Center

    New Leaders for New Schools (NJ1), 2011

    2011-01-01

    New Leaders for New Schools created the Effective Practice Incentive Community (EPIC) initiative in 2006 to learn from educators driving achievement gains in high-need urban schools. EPIC identifies school leaders and teachers whose students are making significant achievement gains and financially rewards these educators in exchange for sharing…

  7. EPIC: A Framework for Using Video Games in Ethics Education

    ERIC Educational Resources Information Center

    Schrier, Karen

    2015-01-01

    Ethics education can potentially be supplemented through the use of video games. This article proposes a novel framework (Ethics Practice and Implementation Categorization [EPIC] Framework), which helps educators choose games to be used for ethics education purposes. The EPIC Framework is derived from a number of classic moral development,…

  8. AN OVERVIEW OF THE EPA ENVIRONMENTAL PHOTOGRAPHIC INTERPRETATION CENTER (EPIC)

    EPA Science Inventory



    The EPA Environmental Photographic Interpretation Center (EPIC) supports the EPA Regions and Program Offices with remote sensing based technical support and research and development products. Since 1972, EPIC has provided both imagery and imagery-derived products to the E...

  9. Perfusion Electronic Record Documentation Using Epic Systems Software.

    PubMed

    Riley, Jeffrey B; Justison, George A

    2015-12-01

    The authors comment on Steffens and Gunser's article describing the University of Wisconsin adoption of the Epic anesthesia record to include perfusion information from the cardiopulmonary bypass patient experience. We highlight the current-day lessons and the valuable quality and safety principles the Wisconsin-Epic model anesthesia-perfusion record provides.

  10. Mathematical models for the EPIC code

    SciTech Connect

    Buchanan, H.L.

    1981-06-03

    EPIC is a fluid/envelope type computer code designed to study the energetics and dynamics of a high energy, high current electron beam passing through a gas. The code is essentially two dimensional (x, r, t) and assumes an axisymmetric beam whose r.m.s. radius is governed by an envelope model. Electromagnetic fields, background gas chemistry, and gas hydrodynamics (density channel evolution) are all calculated self-consistently as functions of r, x, and t. The code is a collection of five major subroutines, each of which is described in some detail in this report.

  11. A MySQL Based EPICS Archiver

    SciTech Connect

    Christopher Slominski

    2009-10-01

    Archiving a large fraction of the EPICS signals within the Jefferson Lab (JLAB) Accelerator control system is vital for postmortem and real-time analysis of the accelerator performance. This analysis is performed on a daily basis by scientists, operators, engineers, technicians, and software developers. Archiving poses unique challenges due to the magnitude of the control system. A MySQL Archiving system (Mya) was developed to scale to the needs of the control system; currently archiving 58,000 EPICS variables, updating at a rate of 11,000 events per second. In addition to the large collection rate, retrieval of the archived data must also be fast and robust. Archived data retrieval clients obtain data at a rate over 100,000 data points per second. Managing the data in a relational database provides a number of benefits. This paper describes an archiving solution that uses an open source database and standard off the shelf hardware to reach high performance archiving needs. Mya has been in production at Jefferson Lab since February of 2007.

  12. Students Speak With Gary Cox, EPIC Project Manager

    NASA Video Gallery

    From NASA’s International Space Station Mission Control Center Gary Cox EPIC Project Manager, participates in a Digital Learning Network (DLN) event with students at South Effingham Middle School...

  13. Compilation of a standardised international folate database for EPIC.

    PubMed

    Nicolas, Geneviève; Witthöft, Cornelia M; Vignat, Jérôme; Knaze, Viktoria; Huybrechts, Inge; Roe, Mark; Finglas, Paul; Slimani, Nadia

    2016-02-15

    This paper describes the methodology applied for compiling an "international end-user" folate database. This work benefits from the unique dataset offered by the European Prospective Investigation into Cancer and Nutrition (EPIC) (N=520,000 subjects in 23 centres). Compilation was done in four steps: (1) identify folate-free foods then find folate values for (2) folate-rich foods common across EPIC countries, (3) the remaining "common" foods, and (4) "country-specific" foods. Compiled folate values were concurrently standardised in terms of unit, mode of expression and chemical analysis, using information in national food composition tables (FCT). 43-70% total folate values were documented as measured by microbiological assay. Foods reported in EPIC were either matched directly to FCT foods, treated as recipes or weighted averages. This work has produced the first standardised folate dataset in Europe, which was used to calculate folate intakes in EPIC; a prerequisite to study the relation between folate intake and diseases.

  14. ORAL PRESENTATION:EPA'S ENVIRONMENTAL PHOTOGRAPHIC INTERPRETATION CENTER (EPIC)

    EPA Science Inventory

    This presentation provides an overview of the remote sensing technical support and research and development activities of the Environmental Photographic Interprettion Center (EPIC). It is the basis for a presentation given at the EPA's Office of Acquisition Management's Annual C...

  15. Operational experience from a large EPICS-based accelerator facility

    SciTech Connect

    Ciarlette, D.J.; Gerig, R.

    1995-12-31

    The Advanced Photon Source (APS) at Argonne National Laboratory is a third-generation x-ray light source which uses the Experimental Physics and Industrial Control System (EPICS) to operate its linear accelerator, positron accumulator ring, booster synchrotron, and storage ring equipment. EPICS has been used at the APS since the beginning of installation and commissioning. Currently, EPICS controls approximately 100 VME crates containing over 100,000 process variables. With this complexity, the APS has had to review some of the methods originally employed and make changes as necessary. In addition, due to commissioning and operational needs, higher-level operator software needed to be created. EPICS has been flexible enough to allow this.

  16. Experience with EPICS in a wide variety of applications

    SciTech Connect

    Kraimer, M.R.; Clausen, M.; Lupton, W.; Watson, C.

    1997-08-01

    Currently more than 70 organizations have obtained permission to use the Experimental Physics and Industrial Control System (EPICS), a set of software packages for building real-time control systems. In this paper representatives from four of these sites discuss the reasons their sites chose EPICS, provide a brief discussion of their control system development, and discuss additional control system tools obtained elsewhere or developed locally.

  17. Real-Time performance measurements of EPICS IOCcore.

    SciTech Connect

    Xu, S.; Kraimer, M. R.; Accelerator Systems Division

    2005-01-01

    As the Experimental Physics and Industrial Control System (EPICS) is used in an increasing number of accelerator control systems, EPICS IOCcore is ported to a wider variety of OS platforms and thus the performance of EPICS IOCcore on different hardware and software platforms becomes more important. This paper provides real-time performance measurements of EPICS IOCcore on a VME hardware platform and on three different OS platforms: vxWorks, RTEMS, and Linux. EPICS Input/Output Controller core (IOCcore) software has been ported to several different operating systems (OSs) and many hardware platforms. This paper compares the EPICS IOCcore runtime performance on one hardware platform (MVME2100 PowerPC) and three popular Operating Systems: vxWorks, RTEMS, and Linux. For Linux the following versions were tested: Linux 2.4.2 hard hat 2.0, standard Linux 2.4.30, and Linux 2.6.13. For Linux 2.6.13, the kernel was built both preemptive and non-preemptive. Three real-time parameters are measured: interrupt, context switch, and total response latency. On Linux, more detailed interrupt latencies are measured: interrupt top half to bottom half, and interrupt bottom half to user space interrupt service routine. To implement the tests, several software components were developed. In order to port to other operating systems or hardware platforms only, one component has to be implemented.

  18. AERIAL PHOTO INTERPRETATION FOR SITE CHARACTERIZATION, ENVIRONMENTAL PHOTOGRAPHIC INTERPRETATION CENTER (EPIC)

    EPA Science Inventory

    The Environmental Photographic Interpretation Center (EPIC) is a field station of the Landscape Ecology Branch (LEB), Environmental Sciences Division - Las Vegas, Office of Research and Development EPIC provides remote sensing technical support to help the Agency achieve its mult...

  19. EPIC'S NEW REMOTE SENSING DATA AND INFORMATION TOOLS AVAILABLE FOR EPA CUSTOMERS

    EPA Science Inventory



    EPIC's New Remote Sensing Data and Information Tools Available for EPA Customers Donald Garofalo Environmental Photographic Interpretation Center (EPIC) Landscape Ecology Branch Environmental Sciences Division National Exposure Research Laboratory

    Several new too...

  20. DOE`s Pollution Prevention Information Clearinghouse (EPIC)

    SciTech Connect

    Otis, P.T.

    1994-05-01

    The US Department of Energy`s (DOE`s) Pollution Prevention Information Clearinghouse (EPIC) is a computer system intended for the exchange of pollution prevention information DOE-wide. EPIC is being developed as a distributed system that will allow access to other databases and applications. The first prototype of EPIC (Prototype I) was put on-line in January 1994. Prototype I contains information on EM-funded pollution prevention projects; relevant laws, regulations, guidance, and policy; facility and DOE contacts; and meetings and conferences. Prototype I also gives users access to the INEL Hazardous Solvent Substitution Data System (HSSDS) and to information contained on the US Environmental Protection Agency`s (EPNS) Pollution Prevention Infbrmation Exchange System (PIES) as a test of the distributed system concept. An initial user group of about 35 is testing and providing feedback on Prototype I. Prototype II, with a Graphical User Interface (GUI), is planned for the end of CY94. This paper describes the current state of EPIC in terms of architecture, user interface, and information content. Plans for Prototype II and the final system are then discussed. The EPIC development effort is being coordinated with EPA and US Department of Defense (DoD) efforts to develop or upgrade their pollution prevention information exchange systems.

  1. EvolMarkers: a database for mining exon and intron markers for evolution, ecology and conservation studies.

    PubMed

    Li, Chenhong; Riethoven, Jean-Jack M; Naylor, Gavin J P

    2012-09-01

    Recent innovations in next-generation sequencing have lowered the cost of genome projects. Nevertheless, sequencing entire genomes for all representatives in a study remains expensive and unnecessary for most studies in ecology, evolution and conservation. It is still more cost-effective and efficient to target and sequence single-copy nuclear gene markers for such studies. Many tools have been developed for identifying nuclear markers, but most of these have focused on particular taxonomic groups. We have built a searchable database, EvolMarkers, for developing single-copy coding sequence (CDS) and exon-primed-intron-crossing (EPIC) markers that is designed to work across a broad range of phylogenetic divergences. The database is made up of single-copy CDS derived from BLAST searches of a variety of metazoan genomes. Users can search the database for different types of markers (CDS or EPIC) that are common to different sets of input species with different divergence characteristics. EvolMarkers can be applied to any taxonomic group for which genome data are available for two or more species. We included 82 genomes in the first version of EvolMarkers and have found the methods to be effective across Placozoa, Cnidaria, Arthropod, Nematoda, Annelida, Mollusca, Echinodermata, Hemichordata, Chordata and plants. We demonstrate the effectiveness of searching for CDS markers within annelids and show how to find potentially useful intronic markers within the lizard Anolis. PMID:22805179

  2. Pelagic Life and Depth: Coastal Physical Features in West Africa Shape the Genetic Structure of the Bonga Shad, Ethmalosa fimbriata

    PubMed Central

    Durand, Jean-Dominique; Guinand, Bruno; Dodson, Julian J.; Lecomte, Frédéric

    2013-01-01

    The bonga shad, Ethmalosa fimbriata, is a West African pelagic species still abundant in most habitats of its distribution range and thought to be only recently affected by anthropogenic pressure (habitat destruction or fishing pressure). Its presence in a wide range of coastal habitats characterised by different hydrodynamic processes, represents a case study useful for evaluating the importance of physical structure of the west African shoreline on the genetic structure of a small pelagic species. To investigate this question, the genetic diversity of E. fimbriata was assessed at both regional and species range scales, using mitochondrial (mt) and nuclear DNA markers. Whereas only three panmictic units were identified with mtDNA at the large spatial scale, nuclear genetic markers (EPIC: exon-primed intron-crossing) indicated a more complex genetic pattern at the regional scale. In the northern-most section of shad’s distribution range, up to 4 distinct units were identified. Bayesian inference as well as spatial autocorrelation methods provided evidence that gene flow is impeded by the presence of deep-water areas near the coastline (restricting the width of the coastal shelf), such as the Cap Timiris and the Kayar canyons in Mauritania and Senegal, respectively. The added discriminatory power provided by the use of EPIC markers proved to be essential to detect the influence of more subtle, contemporary processes (e.g. gene flow, barriers, etc.) acting within the glacial refuges identified previously by mtDNA. PMID:24130890

  3. EvolMarkers: a database for mining exon and intron markers for evolution, ecology and conservation studies.

    PubMed

    Li, Chenhong; Riethoven, Jean-Jack M; Naylor, Gavin J P

    2012-09-01

    Recent innovations in next-generation sequencing have lowered the cost of genome projects. Nevertheless, sequencing entire genomes for all representatives in a study remains expensive and unnecessary for most studies in ecology, evolution and conservation. It is still more cost-effective and efficient to target and sequence single-copy nuclear gene markers for such studies. Many tools have been developed for identifying nuclear markers, but most of these have focused on particular taxonomic groups. We have built a searchable database, EvolMarkers, for developing single-copy coding sequence (CDS) and exon-primed-intron-crossing (EPIC) markers that is designed to work across a broad range of phylogenetic divergences. The database is made up of single-copy CDS derived from BLAST searches of a variety of metazoan genomes. Users can search the database for different types of markers (CDS or EPIC) that are common to different sets of input species with different divergence characteristics. EvolMarkers can be applied to any taxonomic group for which genome data are available for two or more species. We included 82 genomes in the first version of EvolMarkers and have found the methods to be effective across Placozoa, Cnidaria, Arthropod, Nematoda, Annelida, Mollusca, Echinodermata, Hemichordata, Chordata and plants. We demonstrate the effectiveness of searching for CDS markers within annelids and show how to find potentially useful intronic markers within the lizard Anolis.

  4. Development of mpi_EPIC model for global agroecosystem modeling

    DOE PAGESBeta

    Kang, Shujiang; Wang, Dali; Jeff A. Nichols; Schuchart, Joseph; Kline, Keith L.; Wei, Yaxing; Ricciuto, Daniel M.; Wullschleger, Stan D.; Post, Wilfred M.; Izaurralde, R. Cesar

    2014-12-31

    Models that address policy-maker concerns about multi-scale effects of food and bioenergy production systems are computationally demanding. We integrated the message passing interface algorithm into the process-based EPIC model to accelerate computation of ecosystem effects. Simulation performance was further enhanced by applying the Vampir framework. When this enhanced mpi_EPIC model was tested, total execution time for a global 30-year simulation of a switchgrass cropping system was shortened to less than 0.5 hours on a supercomputer. The results illustrate that mpi_EPIC using parallel design can balance simulation workloads and facilitate large-scale, high-resolution analysis of agricultural production systems, management alternatives and environmentalmore » effects.« less

  5. Development of mpi_EPIC model for global agroecosystem modeling

    SciTech Connect

    Kang, Shujiang; Wang, Dali; Jeff A. Nichols; Schuchart, Joseph; Kline, Keith L.; Wei, Yaxing; Ricciuto, Daniel M.; Wullschleger, Stan D.; Post, Wilfred M.; Izaurralde, R. Cesar

    2014-12-31

    Models that address policy-maker concerns about multi-scale effects of food and bioenergy production systems are computationally demanding. We integrated the message passing interface algorithm into the process-based EPIC model to accelerate computation of ecosystem effects. Simulation performance was further enhanced by applying the Vampir framework. When this enhanced mpi_EPIC model was tested, total execution time for a global 30-year simulation of a switchgrass cropping system was shortened to less than 0.5 hours on a supercomputer. The results illustrate that mpi_EPIC using parallel design can balance simulation workloads and facilitate large-scale, high-resolution analysis of agricultural production systems, management alternatives and environmental effects.

  6. Science with EPICS, the E-ELT planet finder

    NASA Astrophysics Data System (ADS)

    Gratton, Raffaele; Kasper, Markus; Vérinaud, Christophe; Bonavita, Mariangela; Schmid, Hans M.

    2011-11-01

    EPICS is the proposed planet finder for the European Extremely Large Telescope. EPICS is a high contrast imager based on a high performing extreme adaptive optics system, a diffraction suppression module, and two scientific instruments: an Integral Field Spectrograph (IFS) for the near infrared (0.95-1.65 μm), and a differential polarization imager (E-POL). Both these instruments should allow imaging and characterization of planets shining in reflected light, possibly down to Earth-size. A few high interesting science cases are presented.

  7. EPICS: A control system software co-development success story

    SciTech Connect

    Knott, M.; Gurd, D.; Lewis, S.; Thuot, M.

    1993-11-01

    The Experimental Physics and Industrial Control Systems (EPICS) is the result of a software sharing and co-development effort of major importance now underway. The initial two participants, LANL and ANL, have now been joined by three other labs, and an earlier version of the software has been transferred to three commercial firms and is currently undergoing separate development. The reasons for EPICS`s success may be useful to enumerate and explain and the desire and prospects for its continued development are certainly worth examining.

  8. Becoming Teachers' Little Epics: What Digital Storytelling Might Reveal

    ERIC Educational Resources Information Center

    Radford, Linda; Aitken, Avril

    2014-01-01

    This paper discusses pre-service teachers' use of multi-modal tools to produce three-minute films in light of critical moments in their teaching practice. Two cases are considered; each centers on a film, a "little epic" that was produced by a future teacher who attempts to work within an anti-racist framework for social justice.…

  9. The Epic inside Us: Using Intuitive Play to Teach Beowulf

    ERIC Educational Resources Information Center

    Menzies, J. Beth Haase

    2004-01-01

    The element of play is underutilized in the secondary classroom in spite of the fact that play produces unique opportunities for meaningful learning. The ways in which the elements of epic poetry, Beowulf, and the Old English diction differed from the modern usage is discussed.

  10. The Epic Tradition in Science Fiction and Fantasy.

    ERIC Educational Resources Information Center

    Mahon, Robert Lee

    1987-01-01

    Claims that some of the finest works of contemporary science fiction and fantasy borrow heavily from the epic tradition. Proposes that science fiction and fantasy can avoid the disbelief problem by the simple expedient of removing the "here and now," and, thereby, the realistic diminishment of causes and heroes. (JD)

  11. "El Norte," Deracination and Circularity: An Epic Gone Awry

    ERIC Educational Resources Information Center

    Brakel, Arthur

    2007-01-01

    Early journalistic reviews (e.g., Gold, Ebert, and Kael) of "El Norte" (1983), Gregory Nava's first major film, identify it as an epic. In "El Norte" the siblings Enrique and Rosa, two Guatemalan Amerindians, leave their native village on a quest to what for them is the mythical land in the North. Although "El Norte" corresponds to the general…

  12. The Epic of Sundiata: Using African Literature in the Classroom.

    ERIC Educational Resources Information Center

    Sullivan, Margaret Lo Piccolo

    1998-01-01

    Discusses the "Epic of Sundiata" which chronicles the rise of the Empire of Mali in the grasslands of northwestern Africa in the 13th century. This work is a compelling drama that bears comparison to such other hero tales as "The Iliad" and the Arthurian legend. Includes suggested teaching activities. (MJP)

  13. areaDetector: Software for 2-D Detectors in EPICS

    SciTech Connect

    Rivers, M.

    2011-09-23

    areaDetector is a new EPICS module designed to support 2-D detectors. It is modular C++ code that greatly simplifies the task of writing support for a new detector. It also supports plugins, which receive detector data from the driver and process it in some way. Existing plugins perform Region-Of-Interest extraction and analysis, file saving (in netCDF, HDF, TIFF and JPEG formats), color conversion, and export to EPICS records for image display in clients like ImageJ and IDL. Drivers have now been written for many of the detectors commonly used at synchrotron beamlines, including CCDs, pixel array and amorphous silicon detectors, and online image plates.

  14. areaDetector: Software for 2-D Detectors in EPICS

    SciTech Connect

    Rivers, Mark L.

    2010-06-23

    areaDetector is a new EPICS module designed to support 2-D detectors. It is modular C++ code that greatly simplifies the task of writing support for a new detector. It also supports plugins, which receive detector data from the driver and process it in some way. Existing plugins perform Region-Of-Interest extraction and analysis, file saving (in netCDF, HDF, TIFF and JPEG formats), color conversion, and export to EPICS records for image display in clients like ImageJ and IDL. Drivers have now been written for many of the detectors commonly used at synchrotron beamlines, including CCDs, pixel array and amorphous silicon detectors, and online image plates.

  15. EPICS V4 Evaluation for SNS Neutron Data

    SciTech Connect

    Kasemir, Kay; Pearson, Matthew R; Guyotte, Greg S

    2015-01-01

    Version 4 of the Experimental Physics and Industrial Control System (EPICS) toolkit allows defining application-specific structured data types (pvData) and offers a network protocol for their efficient exchange (pvAccess). We evaluated V4 for the transport of neutron events from the detectors of the Spallation Neutron Source (SNS) to data acquisition and experiment monitoring systems. This includes the comparison of possible data structures, performance tests, and experience using V4 in production on a beam line.

  16. Perfusion Electronic Record Documentation Using Epic Systems Software.

    PubMed

    Steffens, Thomas G; Gunser, John M; Saviello, George M

    2015-12-01

    This paper describes the design and use of Epic Systems software for documentation of perfusion activities as part of the patient electronic medical record. The University of Wisconsin Hospital and Clinics adapted the Anesthesia software module and developed an integrated perfusion/anesthesia record for the documentation of cardiac and non-cardiac surgical procedures. This project involved multiple committees, approvals, and training to successfully implement. This article will describe our documentation options, concepts, design, challenges, training, and implementation during our initial experience.

  17. Simulating Field-Scale Soil Organic Carbon Dynamics Using EPIC

    SciTech Connect

    Causarano, Hector J.; Shaw, Joey N.; Franzluebbers, A. J.; reeves, D. W.; Raper, Randy L.; Balkcom, Kipling S.; Norfleet, M. L.; Izaurralde, R Cesar

    2007-07-01

    Simulation models integrate our knowledge of soil organic C (SOC) dynamics and are useful tools for evaluating impacts of crop management on soil C sequestration; yet, they require local calibration. Our objectives were to calibrate the Environmental Policy Integrated Climate (EPIC) model, and evaluate its performance for simulating SOC fractions as affected by soil landscape and management. An automated parameter optimization procedure was used to calibrate the model for a site-specific experiment in the Coastal Plain of central Alabama. The ability of EPIC to predict corn (Zea mays L.) and cotton (Gossypium hirsutum L.) yields and SOC dynamics on different soil landscape positions (summit, sideslope and drainageway) during the initial period of conservation tillage adoption (5 years) was evaluated using regression and mean squared deviations. Simulated yield explained 88% of measured yield variation, with greatest disagreement on the sideslope position and highest agreement in the drainageway. Simulations explained approximately 1, 34 and 40% of the total variation in microbial biomass C (MBC), particulate organic C (POC) and total organic C (TOC), respectively. Lowest errors on TOC simulations (0-20 cm) were found on the sideslope and summit. We conclude that the automated parameterization was generally successful, although further work is needed to refine the MBC and POC fractions, and to improve EPIC predictions of SOC dynamics with depth. Overall, EPIC was sensitive to spatial differences in C fractions that resulted from differing soil landscape positions. The model needs additional refinement for accurate simulations of field-scale SOC dynamics affected by short-term management decisions.

  18. An introduction to plant monitoring through the EPICS control system

    SciTech Connect

    Carwardine, J.A.

    1995-12-31

    The experimental Physics and Industrial Control System (EPICS) environment (1) provides the framework for monitoring any equipment connected to it. Various tools offer engineers and scientists the opportunity to easily create high-level monitoring applications without having to rely on expert programmers to develop custom programs. This paper is aimed at the first-time or casual user, providing essential information for using several of the tools. Examples are taken from applications in regular use the Advanced Photon Source (APS).

  19. Doing accelerator physics using SDDS, UNIX, and EPICS

    SciTech Connect

    Borland, M.; Emery, L.; Sereno, N.

    1995-12-31

    The use of the SDDS (Self-Describing Data Sets) file protocol, together with the UNIX operating system and EPICS (Experimental Physics and Industrial Controls System), has proved powerful during the commissioning of the APS (Advanced Photon Source) accelerator complex. The SDDS file protocol has permitted a tool-oriented approach to developing applications, wherein generic programs axe written that function as part of multiple applications. While EPICS-specific tools were written for data collection, automated experiment execution, closed-loop control, and so forth, data processing and display axe done with the SDDS Toolkit. Experiments and data reduction axe implemented as UNIX shell scripts that coordinate the execution of EPICS specific tools and SDDS tools. Because of the power and generic nature of the individual tools and of the UNIX shell environment, automated experiments can be prepared and executed rapidly in response to unanticipated needs or new ideas. Examples are given of application of this methodology to beam motion characterization, beam-position-monitor offset measurements, and klystron characterization.

  20. Cloud Detection with the Earth Polychromatic Imaging Camera (EPIC)

    NASA Technical Reports Server (NTRS)

    Meyer, Kerry; Marshak, Alexander; Lyapustin, Alexei; Torres, Omar; Wang, Yugie

    2011-01-01

    The Earth Polychromatic Imaging Camera (EPIC) on board the Deep Space Climate Observatory (DSCOVR) would provide a unique opportunity for Earth and atmospheric research due not only to its Lagrange point sun-synchronous orbit, but also to the potential for synergistic use of spectral channels in both the UV and visible spectrum. As a prerequisite for most applications, the ability to detect the presence of clouds in a given field of view, known as cloud masking, is of utmost importance. It serves to determine both the potential for cloud contamination in clear-sky applications (e.g., land surface products and aerosol retrievals) and clear-sky contamination in cloud applications (e.g., cloud height and property retrievals). To this end, a preliminary cloud mask algorithm has been developed for EPIC that applies thresholds to reflected UV and visible radiances, as well as to reflected radiance ratios. This algorithm has been tested with simulated EPIC radiances over both land and ocean scenes, with satisfactory results. These test results, as well as algorithm sensitivity to potential instrument uncertainties, will be presented.

  1. A brave new world for an old world pest: Helicoverpa armigera (Lepidoptera: Noctuidae) in Brazil.

    PubMed

    Tay, Wee Tek; Soria, Miguel F; Walsh, Thomas; Thomazoni, Danielle; Silvie, Pierre; Behere, Gajanan T; Anderson, Craig; Downes, Sharon

    2013-01-01

    The highly polyphagous Old World cotton bollworm Helicoverpa armigera is a quarantine agricultural pest for the American continents. Historically H. armigera is thought to have colonised the American continents around 1.5 to 2 million years ago, leading to the current H. zea populations on the American continents. The relatively recent species divergence history is evident in mating compatibility between H. zea and H. armigera under laboratory conditions. Despite periodic interceptions of H. armigera into North America, this pest species is not believed to have successfully established significant populations on either continent. In this study, we provide molecular evidence via mitochondrial DNA (mtDNA) cytochrome oxidase I (COI) and cytochrome b (Cyt b) partial gene sequences for the successful recent incursion of H. armigera into the New World, with individuals being detected at two sites (Primavera do Leste, Pedra Preta) within the State of Mato Grosso in Brazil. The mtDNA COI and Cyt b haplotypes detected in the Brazilian H. armigera individuals are common throughout the Old World, thus precluding identification of the founder populations. Combining the two partial mtDNA gene sequences showed that at least two matrilines are present in Brazil, while the inclusion of three nuclear DNA Exon-Primed Intron-Crossing (EPIC) markers identified a further two possible matrilines in our samples. The economic, biosecurity, resistance management, ecological and evolutionary implications of this incursion are discussed in relation to the current agricultural practices in the Americas.

  2. A Brave New World for an Old World Pest: Helicoverpa armigera (Lepidoptera: Noctuidae) in Brazil

    PubMed Central

    Walsh, Thomas; Thomazoni, Danielle; Silvie, Pierre; Behere, Gajanan T.; Anderson, Craig; Downes, Sharon

    2013-01-01

    The highly polyphagous Old World cotton bollworm Helicoverpa armigera is a quarantine agricultural pest for the American continents. Historically H. armigera is thought to have colonised the American continents around 1.5 to 2 million years ago, leading to the current H. zea populations on the American continents. The relatively recent species divergence history is evident in mating compatibility between H. zea and H. armigera under laboratory conditions. Despite periodic interceptions of H. armigera into North America, this pest species is not believed to have successfully established significant populations on either continent. In this study, we provide molecular evidence via mitochondrial DNA (mtDNA) cytochrome oxidase I (COI) and cytochrome b (Cyt b) partial gene sequences for the successful recent incursion of H. armigera into the New World, with individuals being detected at two sites (Primavera do Leste, Pedra Preta) within the State of Mato Grosso in Brazil. The mtDNA COI and Cyt b haplotypes detected in the Brazilian H. armigera individuals are common throughout the Old World, thus precluding identification of the founder populations. Combining the two partial mtDNA gene sequences showed that at least two matrilines are present in Brazil, while the inclusion of three nuclear DNA Exon-Primed Intron-Crossing (EPIC) markers identified a further two possible matrilines in our samples. The economic, biosecurity, resistance management, ecological and evolutionary implications of this incursion are discussed in relation to the current agricultural practices in the Americas. PMID:24260345

  3. 75 FR 65985 - Safety Zone: Epic Roasthouse Private Party Firework Display, San Francisco, CA

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-10-27

    ... SECURITY Coast Guard 33 CFR Part 165 RIN 1625-AA00 Safety Zone: Epic Roasthouse Private Party Firework... Roasthouse Private Party. This safety zone is established to ensure the safety of participants and spectators... in effect during the event. Basis and Purpose The Epic Roasthouse Private Party is scheduled to...

  4. Correspondence and Contradiction in Ancient Greek Society and Education: Homer's Epic Poetry and Plato's Early Dialogues.

    ERIC Educational Resources Information Center

    Sichel, Betty A.

    1983-01-01

    Homer's epic poetry illustrates correspondence between society's needs and the values stressed in education, while Socrates' thought uncovers contradictions between social and educational values and seeks a new form of correspondence. Examples from the Epics and Plato's early dialogues trace changing educational attitudes among the Classical…

  5. An Evaluation of OCLC's EPIC as a Resource for Subject Access to Videos.

    ERIC Educational Resources Information Center

    Palmer, Joseph W.

    1992-01-01

    An examination of OCLC's EPIC service and standard video reference tools revealed that EPIC was more comprehensive in finding video titles on the popular or specialized topics of bonsai, genealogy, karate, and holography, because of its keyword searching ability on the massive OCLC database. (11 references) (EA)

  6. Perfusion Electronic Record Documentation Using Epic Systems Software

    PubMed Central

    Steffens, Thomas G.; Gunser, John M.; Saviello, George M.

    2015-01-01

    Abstract: This paper describes the design and use of Epic Systems software for documentation of perfusion activities as part of the patient electronic medical record. The University of Wisconsin Hospital and Clinics adapted the Anesthesia software module and developed an integrated perfusion/anesthesia record for the documentation of cardiac and non-cardiac surgical procedures. This project involved multiple committees, approvals, and training to successfully implement. This article will describe our documentation options, concepts, design, challenges, training, and implementation during our initial experience. PMID:26834288

  7. EPICS Input Output Controller (IOC) Record Reference Manual

    SciTech Connect

    Anderson, J.B.; Kraimer, M.R.

    1994-12-01

    This manual describes all supported EPICS record types. The first chapter gives introduction and describes the field summary table. The second chapter describes the fields in database common, i.e. the fields that are present in every record type. The third chapter describes the input and output field that are common to many record types and have the same usage wherever they are used. Following the third chapter is a separate chapter for each record type containing a description of all the fields for that record type except those in database common.

  8. EPICS and WANs: Tradeoffs between Isolation, Security, Robustness, and Transparency

    SciTech Connect

    J. Hill; K. Furukawa; S. Hunt; A. Johnson; R. Lange; J. Sage; E. Williams

    2003-10-01

    The Experimental Physics and Industrial Control System (EPICS)[1] was originally designed for use in local area networks (LANs). Today, the system is routinely deployed into complex wide area networks (WANs) using specialized configuration options and proxy gateways. There are advantages to the current approach including robustness and control over isolation and security. However, some important features are missing including WAN transparent configuration, resource location monitoring, detection of name space collisions during installation, and wildcard queries into the resource attribute space. The paper discusses these issues in detail exploring the relative tradeoffs between different solutions and including our plans for future enhancements.

  9. Electrolysis Performance Improvement Concept Study (EPICS) Flight Experiment-Reflight

    NASA Technical Reports Server (NTRS)

    Schubert, F. H.

    1997-01-01

    The Electrolysis Performance Improvement Concept Study (EPICS) is a flight experiment to demonstrate and validate in a microgravity environment the Static Feed Electrolyzer (SFE) concept which was selected for the use aboard the International Space Station (ISS) for oxygen (O2) generation. It also is to investigate the impact of microgravity on electrochemical cell performance. Electrochemical cells are important to the space program because they provide an efficient means of generating O2 and hydrogen (H2) in space. Oxygen and H2 are essential not only for the survival of humans in space but also for the efficient and economical operation of various space systems. Electrochemical cells can reduce the mass, volume and logistical penalties associated with resupply and storage by generating and/or consuming these gases in space. An initial flight of the EPICS was conducted aboard STS-69 from September 7 to 8, 1995. A temperature sensor characteristics shift and a missing line of software code resulted in only partial success of this initial flight. Based on the review and recommendations of a National Aeronautics and Space Administration (NASA) Johnson Space Center (JSC) review team a reflight activity was initiated to obtain the remaining desired results, not achieved during the initial flight.

  10. JBluIce-EPICS control system for macromolecular crystallography.

    SciTech Connect

    Stepanov, S.; Makarov, O.; Hilgart, M.; Pothineni, S.; Urakhchin, A.; Devarapalli, S.; Yoder, D.; Becker, M.; Ogata, C.; Sanishvili, R.; Nagarajan, V.; Smith, J. L.; Fischetti, R. F.

    2011-01-01

    The trio of macromolecular crystallography beamlines constructed by the General Medicine and Cancer Institutes Collaborative Access Team (GM/CA-CAT) in Sector 23 of the Advanced Photon Source (APS) have been in growing demand owing to their outstanding beam quality and capacity to measure data from crystals of only a few micrometres in size. To take full advantage of the state-of-the-art mechanical and optical design of these beamlines, a significant effort has been devoted to designing fast, convenient, intuitive and robust beamline controls that could easily accommodate new beamline developments. The GM/CA-CAT beamline controls are based on the power of EPICS for distributed hardware control, the rich Java graphical user interface of Eclipse RCP and the task-oriented philosophy as well as the look and feel of the successful SSRL BluIce graphical user interface for crystallography. These beamline controls feature a minimum number of software layers, the wide use of plug-ins that can be written in any language and unified motion controls that allow on-the-fly scanning and optimization of any beamline component. This paper describes the ways in which BluIce was combined with EPICS and converted into the Java-based JBluIce, discusses the solutions aimed at streamlining and speeding up operations and gives an overview of the tools that are provided by this new open-source control system for facilitating crystallographic experiments, especially in the field of microcrystallography.

  11. Data acquisition system for KOMAC beam monitoring using EPICS middleware

    NASA Astrophysics Data System (ADS)

    Song, Young-Gi

    2015-10-01

    The beam diagnostics instrument used to measure the beam properties is one of the important devices for the 100-MeV proton linear accelerator of the KOrea Multi-purpose Accelerator Complex (KOMAC). A data acquisition system (DAQ) is required to collect the output beam signals conditioned in the analog front-end circuitry of a beam loss monitor (BLM) and a beam position monitor (BPM). The electrical beam signal must be digitized, and the sampling has to be synchronized to a global timing system that produces a pulse signal for the pulsed beam operation. The digitized data must be accessible by the experimental physics and industrial control system (EPICS)-based control system, which manages all accelerator control. An input output controller (IOC), which runs Linux on a central process unit (CPU) module with a peripheral component interconnect (PCI) express-based Analog-to-digital converter (ADC) card, has been adopted to satisfy the requirements. An associated Linux driver and EPICS device support module have also been developed. The IOC meets the requirements, and the development and maintenance of software for the IOC is very efficient. In this paper, the details of the DAQ system for the BLM and the BPM with the introduction of the KOMAC beam-diagnostics devices, along with the performance, are described.

  12. Physical activity in the EPIC-Italy centers.

    PubMed

    Salvini, Simonetta; Saieva, Calogero; Ciardullo, Anna Vittoria; Panico, Salvatore; Masala, Giovanna; Assedi, Melania; Berrino, Franco; Pala, Valeria; Frasca, Graziella; Tumino, Rosario; Veglia, Fabrizio; Sacerdote, Carlotta; Palli, Domenico

    2003-01-01

    The European Prospective Investigation into Cancer and nutrition offers the opportunity to explore patterns of physical activity in a large series of healthy adults enrolled in the different local cohorts of the Italian section of the European EPIC project. Physical activity is considered one of the means by which chronic disease could be prevented. Subjects in the EPIC study completed a life-style questionnaire, with a section dedicated to the assessment of physical activity at work and during leisure time. Time spent in the various activities was transformed into an index of physical activity (physical activity level, PAL) and an activity index that includes intense activity (PAL; intense activity included). Quintiles of these indexes were computed in order to observe the distribution of subject characteristics according to levels of physical activity. In general, the population was characterized by low levels of physical activity at work, with more than 50% of the sample reporting sedentary occupations. During leisure time, only a small percentage of subjects compensated for the inactivity at work by engaging in energy-consuming activities. In particular, organized fitness activities were reported by a small percentage of people, whereas walking was the most common sort of physical activity. Specific types of activity seemed to characterize subjects in the different areas of the country, reflecting local traditions or specific living situations. Detailed information about physical activity habits, together with a description of other characteristics, could help in designing physical activity promotion programs in different Italian populations and age groups.

  13. Assessment of Spacecraft Systems Integration Using the Electric Propulsion Interactions Code (EPIC)

    NASA Technical Reports Server (NTRS)

    Mikellides, Ioannis G.; Kuharski, Robert A.; Mandell, Myron J.; Gardner, Barbara M.; Kauffman, William J. (Technical Monitor)

    2002-01-01

    SAIC is currently developing the Electric Propulsion Interactions Code 'EPIC', an interactive computer tool that allows the construction of a 3-D spacecraft model, and the assessment of interactions between its subsystems and the plume from an electric thruster. EPIC unites different computer tools to address the complexity associated with the interaction processes. This paper describes the overall architecture and capability of EPIC including the physics and algorithms that comprise its various components. Results from selected modeling efforts of different spacecraft-thruster systems are also presented.

  14. Monitoring commercial conventional facilities control with the APS control system: The Metasys-to-EPICS interface

    SciTech Connect

    Nawrocki, G.J.; Seaver, C.L.; Kowalkowski, J.B.

    1995-12-31

    As controls needs at the Advanced Photon Source matured from an installation phase to an operational phase, the need to monitor the existing conventional facilities control system with the EPICS-based accelerator control system was realized. This existing conventional facilities control network is based on a proprietary system from Johnson Controls called Metasys. Initially read-only monitoring of the Metasys parameters will be provided; however, the ability for possible future expansion to full control is available. This paper describes a method of using commercially available hardware and existing EPICS software as a bridge between the Metasys and EPICS control systems.

  15. EPIC 2.0: a second youth for XMM-Newton's workhorse.

    NASA Astrophysics Data System (ADS)

    Molendi, S.

    2016-06-01

    While much has been achieved with the EPIC experiment on board XMM-Newton, in several areas, we can get even more. In this presentation I will discuss results we have recently obtained, including those from an "all archive" analysis of the EPIC background. I will show how these, along with others, can be used to improve measures of diffuse low surface brightness sources. I will also illustrate how the work we are doing on EPIC is contributing to the design of experiments on the next Large European X-ray mission: Athena.

  16. An EPIC view of absorbed HMXBs in the Scutum Arm

    NASA Astrophysics Data System (ADS)

    Bodaghee, Arash

    2009-10-01

    Observations are proposed for 5 new unclassified gamma-ray sources in the Scutum Arm. Each source will be targeted by EPIC PN and MOS cameras for 25 ks providing us with: a refined position that will facilitate optical/IR identification; spectral characteristics including the slope of the power law in X-rays and the photoelectric absorption; and timing characteristics in the case of Galactic XRBs. The targets lie within 5degs of the plane of the Milky Way, towards the tangent to the Scutum Arm, and are expected to be Galactic in origin. The main objective is to elucidate the nature of these sources. An additional benefit is that we will have a more complete sample of high-energy emitters in the Scutum Arm to compare with absorbed HMXBs in the Norma Arm.

  17. Using EPICS enabled industrial hardware for upgrading control systems

    SciTech Connect

    Bjorkland, Eric A; Veeramani, Arun; Debelle, Thierry

    2009-01-01

    Los Alamos National Laboratory has been working with National Instruments (NI) and Cosy lab to implement EPICS Input Output Controller (IOC) software that runs directly on NI CompactRIO Real Time Controller (RTC) and communicates with NI LabVIEW through a shared memory interface. In this presentation, we will discuss our current progress in upgrading the control system at the Los Alamos Neutron Science Centre (LANSCE) and what we have learned about integrating CompactRIO into large experimental physics facilities. We will also discuss the implications of using Channel Access Server for LabVIEW which will enable more commercial hardware platforms to be used in upgrading existing facilities or in commissioning new ones.

  18. JBluIce–EPICS control system for macromolecular crystallography

    PubMed Central

    Stepanov, Sergey; Makarov, Oleg; Hilgart, Mark; Pothineni, Sudhir Babu; Urakhchin, Alex; Devarapalli, Satish; Yoder, Derek; Becker, Michael; Ogata, Craig; Sanishvili, Ruslan; Venugopalan, Nagarajan; Smith, Janet L.; Fischetti, Robert F.

    2011-01-01

    The trio of macromolecular crystallography beamlines constructed by the General Medicine and Cancer Institutes Collaborative Access Team (GM/CA-CAT) in Sector 23 of the Advanced Photon Source (APS) have been in growing demand owing to their outstanding beam quality and capacity to measure data from crystals of only a few micrometres in size. To take full advantage of the state-of-the-art mechanical and optical design of these beamlines, a significant effort has been devoted to designing fast, convenient, intuitive and robust beamline controls that could easily accommodate new beamline developments. The GM/CA-CAT beamline controls are based on the power of EPICS for distributed hardware control, the rich Java graphical user interface of Eclipse RCP and the task-oriented philosophy as well as the look and feel of the successful SSRL BluIce graphical user interface for crystallography. These beamline controls feature a minimum number of software layers, the wide use of plug-ins that can be written in any language and unified motion controls that allow on-the-fly scanning and optimization of any beamline com­ponent. This paper describes the ways in which BluIce was combined with EPICS and converted into the Java-based JBluIce, discusses the solutions aimed at streamlining and speeding up operations and gives an overview of the tools that are provided by this new open-source control system for facilitating crystallo­graphic experiments, especially in the field of microcrystallo­graphy. PMID:21358048

  19. Neutron Source Facility Training Simulator Based on EPICS

    SciTech Connect

    Park, Young Soo; Wei, Thomas Y.; Vilim, Richard B.; Grelle, Austin L.; Dworzanski, Pawel L.; Gohar, Yousry

    2015-01-01

    A plant operator training simulator is developed for training the plant operators as well as for design verification of plant control system (PCS) and plant protection system (PPS) for the Kharkov Institute of Physics and Technology Neutron Source Facility. The simulator provides the operator interface for the whole plant including the sub-critical assembly coolant loop, target coolant loop, secondary coolant loop, and other facility systems. The operator interface is implemented based on Experimental Physics and Industrial Control System (EPICS), which is a comprehensive software development platform for distributed control systems. Since its development at Argonne National Laboratory, it has been widely adopted in the experimental physics community, e.g. for control of accelerator facilities. This work is the first implementation for a nuclear facility. The main parts of the operator interface are the plant control panel and plant protection panel. The development involved implementation of process variable database, sequence logic, and graphical user interface (GUI) for the PCS and PPS utilizing EPICS and related software tools, e.g. sequencer for sequence logic, and control system studio (CSS-BOY) for graphical use interface. For functional verification of the PCS and PPS, a plant model is interfaced, which is a physics-based model of the facility coolant loops implemented as a numerical computer code. The training simulator is tested and demonstrated its effectiveness in various plant operation sequences, e.g. start-up, shut-down, maintenance, and refueling. It was also tested for verification of the plant protection system under various trip conditions.

  20. Nitrous Oxide Emissions from Biofuel Crops and Parameterization in the EPIC Biogeochemical Model

    EPA Science Inventory

    This presentation describes year 1 field measurements of N2O fluxes and crop yields which are used to parameterize the EPIC biogeochemical model for the corresponding field site. Initial model simulations are also presented.

  1. An autonomous observation and control system based on EPICS and RTS2 for Antarctic telescopes

    NASA Astrophysics Data System (ADS)

    Zhang, Guang-yu; Wang, Jian; Tang, Peng-yi; Jia, Ming-hao; Chen, Jie; Dong, Shu-cheng; Jiang, Fengxin; Wu, Wen-qing; Liu, Jia-jing; Zhang, Hong-fei

    2016-01-01

    For unattended telescopes in Antarctic, the remote operation, autonomous observation and control are essential. An EPICS-(Experimental Physics and Industrial Control System) and RTS2-(Remote Telescope System, 2nd Version) based autonomous observation and control system with remoted operation is introduced in this paper. EPICS is a set of open source software tools, libraries and applications developed collaboratively and used worldwide to create distributed soft real-time control systems for scientific instruments while RTS2 is an open source environment for control of a fully autonomous observatory. Using the advantage of EPICS and RTS2, respectively, a combined integrated software framework for autonomous observation and control is established that use RTS2 to fulfil the function of astronomical observation and use EPICS to fulfil the device control of telescope. A command and status interface for EPICS and RTS2 is designed to make the EPICS IOC (Input/Output Controller) components integrate to RTS2 directly. For the specification and requirement of control system of telescope in Antarctic, core components named Executor and Auto-focus for autonomous observation is designed and implemented with remote operation user interface based on browser-server mode. The whole system including the telescope is tested in Lijiang Observatory in Yunnan Province for practical observation to complete the autonomous observation and control, including telescope control, camera control, dome control, weather information acquisition with the local and remote operation.

  2. Electric Propulsion Interactions Code (EPIC): Recent Enhancements and Goals for Future Capabilities

    NASA Technical Reports Server (NTRS)

    Gardner, Barbara M.; Kuharski, Robert A.; Davis, Victoria A.; Ferguson, Dale C.

    2007-01-01

    The Electric Propulsion Interactions Code (EPIC) is the leading interactive computer tool for assessing the effects of electric thruster plumes on spacecraft subsystems. EPIC, developed by SAIC under the sponsorship of the Space Environments and Effects (SEE) Program at the NASA Marshall Space Flight Center, has three primary modules. One is PlumeTool, which calculates plumes of electrostatic thrusters and Hall-effect thrusters by modeling the primary ion beam as well as elastic scattering and charge-exchange of beam ions with thruster-generated neutrals. ObjectToolkit is a 3-D object definition and spacecraft surface modeling tool developed for use with several SEE Program codes. The main EPIC interface integrates the thruster plume into the 3-D geometry of the spacecraft and calculates interactions and effects of the plume with the spacecraft. Effects modeled include erosion of surfaces due to sputtering, re-deposition of sputtered materials, surface heating, torque on the spacecraft, and changes in surface properties due to erosion and deposition. In support of Prometheus I (JIMO), a number of new capabilities and enhancements were made to existing EPIC models. Enhancements to EPIC include adding the ability to scale and view individual plume components, to import a neutral plume associated with a thruster (to model a grid erosion plume, for example), and to calculate the plume from new initial beam conditions. Unfortunately, changes in program direction have left a number of desired enhancements undone. Variable gridding over a surface and resputtering of deposited materials, including multiple bounces and sticking coefficients, would significantly enhance the erosion/deposition model. Other modifications such as improving the heating model and the PlumeTool neutral plume model, enabling time dependent surface interactions, and including EM1 and optical effects would enable EPIC to better serve the aerospace engineer and electric propulsion systems integrator

  3. Orbit and Atmospheric Composition of the Warm Sub-Saturn EPIC-2037b

    NASA Astrophysics Data System (ADS)

    Petigura, Erik; Deck, Katherine; Benneke, Bjoern; Knutson, Heather; Deming, Drake; Werner, Michael; Livingston, John; Crossfield, Ian

    2015-10-01

    We propose a joint Spitzer/HST proposal to observe transits of two warm, sub-Saturn sized planets orbiting EPIC-203771098 (EPIC-2037 hereafter), a bright G dwarf observed by K2. EPIC-2037b and c are 5.7±0.6 and 7.6±0.8 Earth-radii. Sine the two planets are close to the 2:1 mean-motion resonance, transit timing variations (TTVs) are expected to be large (several hours). Our proposed Spitzer transit observations will yield precise transit times for EPIC-2037b and c. We will model the TTVs to constrain the eccentricities of EPIC-2037b and c which are linked to the formation pathway for this system. EPIC-2037b and c have low densities of 0.4 g/cc and 0.2 g/cc, respectively. Their large size and low surface gravities make these planets favorable targets for transmission spectroscopy by Spitzer, HST, and JWST. In addition to their favorable observability, the planets have low equilibrium temperatures of ~710 K and ~560 K, respectively. These temperatures have not been well-explored in previous studies with transmission spectroscopy. While over a dozen HST+Spitzer transmission spectra have been published in the literature, only GJ1214b, GJ346b, HAT-P-11b, and HAT-P-12b have comparable temperatures. While Spitzer can detect wavelength-dependent variation in transit depth, the Spitzer measurements alone cannot discriminate between various atmospheric compositions. Therefore we propose to use HST/WFC3 to probe the atmosphere of EPIC-2037b. The HST transmission spectrum will probe water vapor in the atmosphere, which reflects the planet?s oxygen abundance, a proxy for the planet?s heavy element enrichment.

  4. Investigating the Impact of EPIC Professional Development on Perspectives Charter School Principals. An Evaluation of the EPIC Professional Learning Model. Evaluation Brief

    ERIC Educational Resources Information Center

    Sloan, Kay; Pereira-Leon, Maura; Honeyford, Michelle

    2010-01-01

    In 2009-10, New Leaders for New Schools partnered with the Perspectives Charter School Network in Chicago to pilot an innovative leadership development program for principals. The program is part of the Effective Practice Incentive Community (EPIC) initiative, which was created by New Leaders in 2006 to identify, reward, and share effective…

  5. The EPIC-MOS Particle-Induced Background Spectrum

    NASA Technical Reports Server (NTRS)

    Kuntz, K. D.; Snowden, S. L.

    2006-01-01

    We have developed a method for constructing a spectrum of the particle-induced instrumental background of the XMM-Newton EPIC MOS detectors that can be used for observations of the diffuse background and extended sources that fill a significant fraction of the instrument field of view. The strength and spectrum of the particle-induced background, that is, the background due to the interaction of particles with the detector and the detector surroundings, is temporally variable as well as spatially variable over individual chips. Our method uses a combination of the filter-wheel-closed data and a database of unexposed-region data to construct a spectrum of the "quiescent" background. We show that, using this method of background subtraction, the differences between independent observations of the same region of "blank sky" are consistent with the statistical uncertainties except when there is clear evidence of solar wind charge exchange emission. We use the blank sky observations to show that contamination by SWCX emission is a strong function of the solar wind proton flux, and that observations through the flanks of the magnetosheath appear to be contaminated only at much higher solar wind fluxes. We have also developed a spectral model of the residual soft proton flares, which allows their effects to be removed to a substantial degree during spectral fitting.

  6. Anthropometry and the Risk of Lung Cancer in EPIC.

    PubMed

    Dewi, Nikmah Utami; Boshuizen, Hendriek C; Johansson, Mattias; Vineis, Paolo; Kampman, Ellen; Steffen, Annika; Tjønneland, Anne; Halkjær, Jytte; Overvad, Kim; Severi, Gianluca; Fagherazzi, Guy; Boutron-Ruault, Marie-Christine; Kaaks, Rudolf; Li, Kuanrong; Boeing, Heiner; Trichopoulou, Antonia; Bamia, Christina; Klinaki, Eleni; Tumino, Rosario; Palli, Domenico; Mattiello, Amalia; Tagliabue, Giovanna; Peeters, Petra H; Vermeulen, Roel; Weiderpass, Elisabete; Torhild Gram, Inger; Huerta, José María; Agudo, Antonio; Sánchez, María-José; Ardanaz, Eva; Dorronsoro, Miren; Quirós, José Ramón; Sonestedt, Emily; Johansson, Mikael; Grankvist, Kjell; Key, Tim; Khaw, Kay-Tee; Wareham, Nick; Cross, Amanda J; Norat, Teresa; Riboli, Elio; Fanidi, Anouar; Muller, David; Bueno-de-Mesquita, H Bas

    2016-07-15

    The associations of body mass index (BMI) and other anthropometric measurements with lung cancer were examined in 348,108 participants in the European Investigation Into Cancer and Nutrition (EPIC) between 1992 and 2010. The study population included 2,400 case patients with incident lung cancer, and the average length of follow-up was 11 years. Hazard ratios were calculated using Cox proportional hazard models in which we modeled smoking variables with cubic splines. Overall, there was a significant inverse association between BMI (weight (kg)/height (m)(2)) and the risk of lung cancer after adjustment for smoking and other confounders (for BMI of 30.0-34.9 versus 18.5-25.0, hazard ratio = 0.72, 95% confidence interval: 0.62, 0.84). The strength of the association declined with increasing follow-up time. Conversely, after adjustment for BMI, waist circumference and waist-to-height ratio were significantly positively associated with lung cancer risk (for the highest category of waist circumference vs. the lowest, hazard ratio = 1.25, 95% confidence interval: 1.05, 1.50). Given the decline of the inverse association between BMI and lung cancer over time, the association is likely at least partly due to weight loss resulting from preclinical lung cancer that was present at baseline. Residual confounding by smoking could also have influenced our findings. PMID:27370791

  7. The application of epic3 guidelines: the complexity of practice.

    PubMed

    Cole, Mark

    Healthcare-associated infection (HCAI) is a major patient safety concern and is associated with morbidity, mortality and increased healthcare costs. Prevention and control requires a multi-modal approach, but the individual's accountability and rigorous application of standard infection prevention and control behaviours is at its core. The third instalment of the epic3 guidance ( Loveday et al, 2014a ) provided the evidence and advanced the importance of hand-hygiene behaviour, the use of non-sterile gloves and environmental cleanliness. This discussion considers some of the recommendations made in these areas of practice and some of the underlying complexities. Producing guidelines based on the best available evidence and transforming them into policies can be a useful adjunct to communicating the necessary standards. However, policies often erase the complexity of implementation. To strive for the best possible standard is an understandable and laudable objective, but organisations need to be mindful of the difficulties and obstacles that stand in their way, particularly in an era where the philosophy of 'zero tolerance' is gaining popularity. PMID:26419710

  8. OPTIMIZING BRAIN CONNECTIVITY NETWORKS FOR DISEASE CLASSIFICATION USING EPIC.

    PubMed

    Prasad, Gautam; Joshi, Shantanu H; Thompson, Paul M

    2014-05-01

    We propose a method to adaptively select an optimal cortical segmentation for brain connectivity analysis that maximizes feature-based disease classification performance. In standard structural connectivity analysis, the cortex is typically subdivided (parcellated) into N anatomical regions. White matter fiber pathways from tractography are used to compute an N × N matrix, which represents the pairwise connectivity between those regions. We optimize this representation by sampling over the space of possible region combinations and represent each configuration as a set partition of the N anatomical regions. Each partition is assigned a score using accuracy from a support vector machine (SVM) classifier of connectivity matrices in a group of patients and controls. We then define a high-dimensional optimization problem using simulated annealing to identify an optimal partition for maximum classification accuracy. We evaluate the results separately on test data using cross-validation. Specifically, we demonstrate results on the ADNI-2 dataset, where we optimally parcellate the cortex to yield an 85% classification accuracy using connectivity information alone. We refer to our method as evolving partitions to improve connectomics (EPIC).

  9. The Calibration of the DSCOVR EPIC Multiple Visible Channel Instrument Using MODIS and VIIRS as a Reference

    NASA Technical Reports Server (NTRS)

    Haney, Conor; Doeling, David; Minnis, Patrick; Bhatt, Rajendra; Scarino, Benjamin; Gopalan, Arun

    2016-01-01

    The Deep Space Climate Observatory (DSCOVR), launched on 11 February 2015, is a satellite positioned near the Lagrange-1 (L1) point, carrying several instruments that monitor space weather, and Earth-view sensors designed for climate studies. The Earth Polychromatic Imaging Camera (EPIC) onboard DSCOVR continuously views the sun-illuminated portion of the Earth with spectral coverage in the UV, VIS, and NIR bands. Although the EPIC instrument does not have any onboard calibration abilities, its constant view of the sunlit Earth disk provides a unique opportunity for simultaneous viewing with several other satellite instruments. This arrangement allows the EPIC sensor to be inter-calibrated using other well-characterized satellite instrument reference standards. Two such instruments with onboard calibration are MODIS, flown on Aqua and Terra, and VIIRS, onboard Suomi-NPP. The MODIS and VIIRS reference calibrations will be transferred to the EPIC instrument using both all-sky ocean and deep convective clouds (DCC) ray-matched EPIC and MODIS/VIIRS radiance pairs. An automated navigation correction routine was developed to more accurately align the EPIC and MODIS/VIIRS granules. The automated navigation correction routine dramatically reduced the uncertainty of the resulting calibration gain based on the EPIC and MODIS/VIIRS radiance pairs. The SCIAMACHY-based spectral band adjustment factors (SBAF) applied to the MODIS/ VIIRS radiances were found to successfully adjust the reference radiances to the spectral response of the specific EPIC channel for over-lapping spectral channels. The SBAF was also found to be effective for the non-overlapping EPIC channel 10. Lastly, both ray-matching techniques found no discernable trends for EPIC channel 7 over the year of publically released EPIC data.

  10. Collaborative development of the EPICS Qt framework Phase I Final Report

    SciTech Connect

    Mayssat, Robert E.

    2015-01-15

    At Lyncean, a private company spun-off from technology developed at the SLAC National Lab, we have been using EPICS for over a decade. EPICS is ubiquitous on our flagship product – the Compact Light Source. EPICS is not only used to control our laser and accelerator systems, but also to control our x-ray beamlines. The goal of this SBIR is for Lyncean Technologies to spearhead a worldwide collaborative effort for the development of control system tools for EPICS using the Qt framework, a C++-based coding environment that could serve as a competitive alternative to the Java-based Control System Studio (CSS). This grant's Phase I, not unlike a feasibility study, is designed for planning and scoping the preparatory work needed for Phase II or other funding opportunities. The three main objectives of this Phase I are (1) to become better acquainted with the existing EPICS Qt software and Qt framework in order to evaluate the best options for ongoing development, (2) to demonstrate that our engineers can lead the EPICS community and jump-start the Qt collaboration, and (3) to identify a scope for our future work with solicited feedback from the EPICS community. This Phase I report includes key technical findings. It clarifies the differences between the two apparently-competing EPICS Qt implementations, caQtDM and the QE Framework; it explains how to create python-bindings, and compares Qt graphical libraries. But this report is also a personal story that narrates the birth of a collaboration. Starting a collaboration is not the work of a single individual, but the work of many. Therefore this report is also an attempt to publicly give credit to many who supported the effort. The main take-away from this grant is the successful birth of an EPICS Qt collaboration, seeded with existing software from the PSI and the Australian Synchrotron. But a lot more needs to be done for the collaboration founders' vision to be realized, and for the collaboration to reach its full

  11. Dietary patterns among older Europeans: the EPIC-Elderly study.

    PubMed

    Bamia, Christina; Orfanos, Philippos; Ferrari, Pietro; Overvad, Kim; Hundborg, Heidi H; Tjønneland, Anne; Olsen, Anja; Kesse, Emmanuelle; Boutron-Ruault, Marie-Christine; Clavel-Chapelon, Françoise; Nagel, Gabriele; Boffetta, Paolo; Boeing, Heiner; Hoffmann, Kurt; Trichopoulos, Dimitrios; Baibas, Nikos; Psaltopoulou, Theodora; Norat, Teresa; Slimani, Nadia; Palli, Domenico; Krogh, Vittorio; Panico, Salvatore; Tumino, Rosario; Sacerdote, Carlotta; Bueno-de-Mesquita, H B; Ocké, Marga C; Peeters, Petra H; van Rossum, Caroline T; Quirós, José-Ramón; Sánchez, Maria-José; Navarro, Carmen; Barricarte, Aurelio; Dorronsoro, Miren; Berglund, Göran; Wirfält, Elisabet; Hallmans, Göran; Johansson, Ingegerd; Bingham, Sheila; Khaw, Kay-Tee; Spencer, Elizabeth A; Roddam, Andrew W; Riboli, Elio; Trichopoulou, Antonia

    2005-07-01

    Overall dietary patterns have been associated with health and longevity. We used principal component (PC) and cluster analyses to identify the prevailing dietary patterns of 99 744 participants, aged 60 years or older, living in nine European countries and participating in the European Prospective Investigation into Cancer and Nutrition (EPIC-Elderly cohort) and to examine their socio-demographic and lifestyle correlates. Two PC were identified: PC1 reflects a 'vegetable-based' diet with an emphasis on foods of plant origin, rice, pasta and other grain rather than on margarine, potatoes and non-alcoholic beverages. PC2 indicates a 'sweet- and fat-dominated' diet with a preference for sweets, added fat and dairy products but not meat, alcohol, bread and eggs. PC1 was associated with a younger age, a higher level of education, physical activity, a higher BMI, a lower waist:hip ratio and never and past smoking. PC2 was associated with older age, less education, never having smoked, a lower BMI and waist:hip ratio and lower levels of physical activity. Elderly individuals in southern Europe scored positively on PC1 and about zero on PC2, whereas the elderly in northern Europe scored negatively on PC1 and variably on PC2. The results of cluster analysis were compatible with the indicated dietary patterns. 'Vegetable-based' and a 'sweet- and fat-dominated' diets are prevalent among the elderly across Europe, and there is a north-south gradient regarding their dietary choices. Our study contributes to the identification of groups of elderly who are likely to have different prospects for long-term disease occurrence and survival.

  12. In-orbit performance of the EPIC-MOS detectors on XMM-Newton

    NASA Astrophysics Data System (ADS)

    Sembay, Steven; Abbey, Anthony; Altieri, Bruno; Ambrosi, Richard; Baskill, Darren; Ferrando, Philippe; Mukerjee, Kallol; Read, Andrew M.; Turner, Martin J. L.

    2004-10-01

    XMM-Newton was launched into space on a highly eccentric 48 hour orbit on December 10th 1999. XMM-Newton is now in its fifth year of operation and has been an outstanding success, observing the Cosmos with imaging, spectroscopy and timing capabilities in the X-ray and optical wavebands. The EPIC-MOS CCD X-ray detectors comprise two out of three of the focal plane instruments on XMM-Newton. In this paper we discuss key aspects of the current status and performance history of the charge transfer ineffiency (CTI), energy resolution and spectral redistribution function (rmf) of EPIC-MOS in its fifth year of operation.

  13. Warrior Mothers as Heroines and Other Healing Imagery in the Finnish National Epic of "Kalevala."

    ERIC Educational Resources Information Center

    Hiltunen, Sirkku M. Sky

    2001-01-01

    Examines mother imagery from the Finnish mythological epic "Kalevala," and describes how they offer healing imagery for understanding and acceptance of one's own mother and subsequently one's self. Offers background to the "Kalevala" itself, its language and to warriors, shamans, and sages in general. Examines seven mother metaphors found in the…

  14. Implementation of EPICS based vacuum control system for variable energy cyclotron centre, Kolkata

    NASA Astrophysics Data System (ADS)

    Roy, Anindya; Bhole, R. B.; Nandy, Partha P.; Yadav, R. C.; Pal, Sarbajit; Roy, Amitava

    2015-03-01

    The vacuum system of the Room Temperature (K = 130) Cyclotron of Variable Energy Cyclotron Centre is comprised of vacuum systems of main machine and Beam Transport System. The vacuum control system is upgraded to a PLC based Automated system from the initial relay based Manual system. The supervisory control of the vacuum system is implemented in Experimental Physics and Industrial Control System (EPICS). An EPICS embedded ARM based vacuum gauge controller is developed to mitigate the requirement of vendor specific gauge controller for gauges and also for seamless integration of the gauge controllers with the control system. A set of MS-Windows ActiveX components with embedded EPICS Channel Access interface are developed to build operator interfaces with less complex programming and to incorporate typical Windows feature, e.g., user authentication, file handling, better fonts, colors, mouse actions etc. into the operator interfaces. The control parameters, monitoring parameters, and system interlocks of the system are archived in MySQL based EPICS MySQL Archiver developed indigenously. In this paper, we describe the architecture, the implementation details, and the performance of the system.

  15. The Epic Poem "Raol de Cambrai" and Student Analysis of the French Feudal Aristocracy.

    ERIC Educational Resources Information Center

    Madison, Kenneth G.

    1980-01-01

    Suggests how college history teachers can help students understand the French aristocracy and its role in medieval society by using a twelfth century epic. "Raol de Cambrai" gives students a sense that the poem's action could have happened to real people. A content analysis of the poem's action and characters is included. (DB)

  16. Theological presuppositions of the evolutionary epic: From Robert Chambers to E. O. Wilson.

    PubMed

    Megill, Allan

    2016-08-01

    We can trace the "evolutionary epic" (named by E. O. Wilson, 1978) back to earlier writers, beginning with Robert Chambers (1844). Its basic elements are: fixation on seeing human history as rooted in biology; an aspiration toward telling the whole history of humankind (in its essential features); and insistence on the overall coherence of the projected narrative. The claim to coherence depends on assuming either that the universe possesses an "embedded rationality," or that it is guided by divine purpose. This article proposes the term "idealism" to refer to these two assumptions taken together, for in practice they were closely linked. Nietzsche (1881) was perhaps the first thinker to point out the evolutionary epic's dependence on such an idealism, and he also pointed out that the assumptions of embedded rationality and of divine purpose are closely connected. Darwin's theory of descent with modification (1859) was sharply inconsistent with these assumptions: he was not an "idealist" in the sense indicated here, and not a proponent of the evolutionary epic. Proclaiming his "materialism," Wilson (1978) failed to acknowledge that the epic depends on idealist assumptions; other adherents of the genre (M. Dowd, L. Rue) resurrect (knowingly or not) its theological roots. PMID:26775028

  17. Implementation of EPICS based vacuum control system for variable energy cyclotron centre, Kolkata

    SciTech Connect

    Roy, Anindya Bhole, R. B.; Nandy, Partha P.; Yadav, R. C.; Pal, Sarbajit; Roy, Amitava

    2015-03-15

    The vacuum system of the Room Temperature (K = 130) Cyclotron of Variable Energy Cyclotron Centre is comprised of vacuum systems of main machine and Beam Transport System. The vacuum control system is upgraded to a PLC based Automated system from the initial relay based Manual system. The supervisory control of the vacuum system is implemented in Experimental Physics and Industrial Control System (EPICS). An EPICS embedded ARM based vacuum gauge controller is developed to mitigate the requirement of vendor specific gauge controller for gauges and also for seamless integration of the gauge controllers with the control system. A set of MS-Windows ActiveX components with embedded EPICS Channel Access interface are developed to build operator interfaces with less complex programming and to incorporate typical Windows feature, e.g., user authentication, file handling, better fonts, colors, mouse actions etc. into the operator interfaces. The control parameters, monitoring parameters, and system interlocks of the system are archived in MySQL based EPICS MySQL Archiver developed indigenously. In this paper, we describe the architecture, the implementation details, and the performance of the system.

  18. The True Lion King of Africa: The Epic History of Sundiata, King of Old Mali.

    ERIC Educational Resources Information Center

    Paterno, Domenica R.

    David Wisniewski's 1992 picture book version of the African epic of "Sundiata, Lion King of Mali" and the actual historical account of the 13th century Lion King, Sundiata, are both badly served by Disney's "The Lion King." Disney has been praised for using African animals as story characters; for using the African landscape as a story setting;…

  19. 78 FR 69363 - Lake Tahoe Basin Management Unit, California, Heavenly Mountain Resort Epic Discovery Project

    Federal Register 2010, 2011, 2012, 2013, 2014

    2013-11-19

    ...The Epic Discovery Project is intended to enhance summer activities in response to the USDA Forest Service Ski Area Recreational Opportunity Enhancement Act of 2011. Heavenly Mountain Resort (Heavenly) proposes to improve year-round, recreation opportunities within the developed portions of the ski area on National Forest System lands using existing facilities and infrastructure to meet the......

  20. Modeling Soil Organic Carbon in a Semiarid Region of Kazakhstan Using EPIC

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Inappropriate land use and soil mismanagement produced wide-scale soil and environmental degradation to the short-grass steppe ecosystem in the semiarid region of Kazakhstan. We used the Environmental Policy Integrated Climate (EPIC) model to study long-term impacts of land use changes and soil mana...

  1. Theological presuppositions of the evolutionary epic: From Robert Chambers to E. O. Wilson.

    PubMed

    Megill, Allan

    2016-08-01

    We can trace the "evolutionary epic" (named by E. O. Wilson, 1978) back to earlier writers, beginning with Robert Chambers (1844). Its basic elements are: fixation on seeing human history as rooted in biology; an aspiration toward telling the whole history of humankind (in its essential features); and insistence on the overall coherence of the projected narrative. The claim to coherence depends on assuming either that the universe possesses an "embedded rationality," or that it is guided by divine purpose. This article proposes the term "idealism" to refer to these two assumptions taken together, for in practice they were closely linked. Nietzsche (1881) was perhaps the first thinker to point out the evolutionary epic's dependence on such an idealism, and he also pointed out that the assumptions of embedded rationality and of divine purpose are closely connected. Darwin's theory of descent with modification (1859) was sharply inconsistent with these assumptions: he was not an "idealist" in the sense indicated here, and not a proponent of the evolutionary epic. Proclaiming his "materialism," Wilson (1978) failed to acknowledge that the epic depends on idealist assumptions; other adherents of the genre (M. Dowd, L. Rue) resurrect (knowingly or not) its theological roots.

  2. DIGITAL IMAGE ANALYSIS REPORTS: THE CONVERSION OF EPIC'S TRADITIONAL SITE CHARACTERIZATION PRODUCT

    EPA Science Inventory

    Over the past several years EPIC has been exploring the practicality and cost-effectiveness of providing its traditional hard-copy report product in digital form. This conversion has a number of practical uses including- 1) compatibility for use as data layers in a GIS; 2) transp...

  3. Reliability and Validity of the Evidence-Based Practice Confidence (EPIC) Scale

    ERIC Educational Resources Information Center

    Salbach, Nancy M.; Jaglal, Susan B.; Williams, Jack I.

    2013-01-01

    Introduction: The reliability, minimal detectable change (MDC), and construct validity of the evidence-based practice confidence (EPIC) scale were evaluated among physical therapists (PTs) in clinical practice. Methods: A longitudinal mail survey was conducted. Internal consistency and test-retest reliability were estimated using Cronbach's alpha…

  4. Estimating plant available water for general crop simulations in ALMANAC/APEX/EPIC/SWAT

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Process-based simulation models ALMANAC/APEX/EPIC/SWAT contain generalized plant growth subroutines to predict biomass and crop yield. Environmental constraints typically restrict plant growth and yield. Water stress is often an important limiting factor; it is calculated as the sum of water use f...

  5. Measuring School and Teacher Effectiveness in EPIC Charter School Consortium--Year 2. Final Report

    ERIC Educational Resources Information Center

    Potamites, Liz; Booker, Kevin; Chaplin, Duncan; Isenberg, Eric

    2009-01-01

    New Leaders for New Schools, a nonprofit organization committed to training school principals, heads the Effective Practices Incentive Community (EPIC), an initiative that offers financial awards to effective educators. Through this initiative, New Leaders offers financial awards to educators in two urban school districts and a consortium of…

  6. Simulating soil C dynamics with EPIC: Model description and testing against long-term data

    SciTech Connect

    Izaurralde, R Cesar C.; Williams, Jimmy R.; Mcgill, William B.; Rosenberg, Norman J.; Quiroga Jakas, Maria C.

    2006-01-01

    Soil carbon sequestration (SCS) has emerged as a technology with significant potential to help stabilize atmospheric CO2 concentrations and thus reduce the threat of global warming. Methods and models are needed to evaluate and recommend SCS practices based on their effects on carbon dynamics and environmental quality. EPIC (Environment Policy Integrated Climate) is a widely used and tested model for simulating many agroecosystem processes including plant growth, crop yield, tillage, wind and water erosion, runoff, soil density, and leaching. Here we describe new C and N modules developed in EPIC built on concepts from the Century model to connect the simulation of soil C dynamics to crop management, tillage methods, and erosion processes. The added C and N routines interact directly with soil moisture, temperature, erosion, tillage, soil density, leaching, and translocation functions in EPIC. Equations were also added to describe the effects of soil texture on soil C stabilization. Lignin concentration is modeled as a sigmoidal function of plant age. EPIC was tested against data from a Conservation Reserve Program (CRP) 6-yr experiment at five sites in three U.S. Great Plains states and a 61-y long-term agronomic experiment in Canada. Mean Square Deviations (MSD) calculated for CRP sites were less than 0.01 kg C2 m2, except for one site where it reached 0.025 kg2 C2 m. MSD values in the 61-y experiment ranged between 0.047 and 0.077 kg C2 m2. In conclusion, the version of the EPIC model presented and tested here contains the necessary algorithms to simulate SCS and improve understanding of the interactions among soil erosion, C dynamics, and tillage. A strength of the model as tested is its ability to explain the variability in crop production, C inputs and SOC and N cycling over a wised range soil, cropping and climatic conditions over periods from 6 to 61 years. For example, at the Breton site over 61 years, EPIC accounted for 69% of the variability in grain

  7. Experimental physics and industrial control system (EPICS) input/output controller (IOC) application developer`s guide

    SciTech Connect

    Kraimer, M.R.

    1994-05-01

    This document describes the core software that resides in an Input/Output Controller (IOC), one of the major components of EPICS. The plan of the book is: EPICS overview, IOC test facilities, general purpose features, database locking - scanning - and processing, static database access, runtime database access, database scanning, record and device support, device support library, IOC database configuration, IOC initialization, and database structures. Other than the first chapter this document describes only core IOC software. Thus it does not describe other EPICS tools such as the sequencer. It also does not describe Channel Access, a major IOC component.

  8. Nutrient Patterns and Their Food Sources in an International Study Setting: Report from the EPIC Study

    PubMed Central

    Moskal, Aurelie; Pisa, Pedro T.; Ferrari, Pietro; Byrnes, Graham; Freisling, Heinz; Boutron-Ruault, Marie-Christine; Cadeau, Claire; Nailler, Laura; Wendt, Andrea; Kühn, Tilman; Boeing, Heiner; Buijsse, Brian; Tjønneland, Anne; Halkjær, Jytte; Dahm, Christina C.; Chiuve, Stephanie E.; Quirós, Jose R.; Buckland, Genevieve; Molina-Montes, Esther; Amiano, Pilar; Huerta Castaño, José M.; Gurrea, Aurelio Barricarte; Khaw, Kay-Tee; Lentjes, Marleen A.; Key, Timothy J.; Romaguera, Dora; Vergnaud, Anne-Claire; Trichopoulou, Antonia; Bamia, Christina; Orfanos, Philippos; Palli, Domenico; Pala, Valeria; Tumino, Rosario; Sacerdote, Carlotta; de Magistris, Maria Santucci; Bueno-de-Mesquita, H. Bas; Ocké, Marga C.; Beulens, Joline W. J.; Ericson, Ulrika; Drake, Isabel; Nilsson, Lena M.; Winkvist, Anna; Weiderpass, Elisabete; Hjartåker, Anette; Riboli, Elio; Slimani, Nadia

    2014-01-01

    Background Compared to food patterns, nutrient patterns have been rarely used particularly at international level. We studied, in the context of a multi-center study with heterogeneous data, the methodological challenges regarding pattern analyses. Methodology/Principal Findings We identified nutrient patterns from food frequency questionnaires (FFQ) in the European Prospective Investigation into Cancer and Nutrition (EPIC) Study and used 24-hour dietary recall (24-HDR) data to validate and describe the nutrient patterns and their related food sources. Associations between lifestyle factors and the nutrient patterns were also examined. Principal component analysis (PCA) was applied on 23 nutrients derived from country-specific FFQ combining data from all EPIC centers (N = 477,312). Harmonized 24-HDRs available for a representative sample of the EPIC populations (N = 34,436) provided accurate mean group estimates of nutrients and foods by quintiles of pattern scores, presented graphically. An overall PCA combining all data captured a good proportion of the variance explained in each EPIC center. Four nutrient patterns were identified explaining 67% of the total variance: Principle component (PC) 1 was characterized by a high contribution of nutrients from plant food sources and a low contribution of nutrients from animal food sources; PC2 by a high contribution of micro-nutrients and proteins; PC3 was characterized by polyunsaturated fatty acids and vitamin D; PC4 was characterized by calcium, proteins, riboflavin, and phosphorus. The nutrients with high loadings on a particular pattern as derived from country-specific FFQ also showed high deviations in their mean EPIC intakes by quintiles of pattern scores when estimated from 24-HDR. Center and energy intake explained most of the variability in pattern scores. Conclusion/Significance The use of 24-HDR enabled internal validation and facilitated the interpretation of the nutrient patterns derived from FFQs

  9. Efficient Detection of Novel Nuclear Markers for Brassicaceae by Transcriptome Sequencing

    PubMed Central

    Stockenhuber, Reinhold; Zoller, Stefan; Shimizu-Inatsugi, Rie; Gugerli, Felix; Shimizu, Kentaro K.; Widmer, Alex; Fischer, Martin C.

    2015-01-01

    The lack of DNA sequence information for most non-model organisms impairs the design of primers that are universally applicable for the study of molecular polymorphisms in nuclear markers. Next-generation sequencing (NGS) techniques nowadays provide a powerful approach to overcome this limitation. We present a flexible and inexpensive method to identify large numbers of nuclear primer pairs that amplify in most Brassicaceae species. We first obtained and mapped NGS transcriptome sequencing reads from two of the distantly related Brassicaceae species, Cardamine hirsuta and Arabis alpina, onto the Arabidopsis thaliana reference genome, and then identified short conserved sequence motifs among the three species bioinformatically. From these, primer pairs to amplify coding regions (nuclear protein coding loci, NPCL) and exon-primed intron-crossing sequences (EPIC) were developed. We identified 2,334 universally applicable primer pairs, targeting 1,164 genes, which provide a large pool of markers as readily usable genomic resource that will help addressing novel questions in the Brassicaceae family. Testing a subset of the newly designed nuclear primer pairs revealed that a great majority yielded a single amplicon in all of the 30 investigated Brassicaceae taxa. Sequence analysis and phylogenetic reconstruction with a subset of these markers on different levels of phylogenetic divergence in the mustard family were compared with previous studies. The results corroborate the usefulness of the newly developed primer pairs, e.g., for phylogenetic analyses or population genetic studies. Thus, our method provides a cost-effective approach for designing nuclear loci across a broad range of taxa and is compatible with current NGS technologies. PMID:26061739

  10. Statistical evaluation of the flux cross-calibration of the XMM-Newton EPIC cameras

    NASA Astrophysics Data System (ADS)

    Mateos, S.; Saxton, R. D.; Read, A. M.; Sembay, S.

    2009-03-01

    Context: The second XMM-Newton serendipitous source catalogue, 2XMM, provides the ideal data base for performing a statistical evaluation of the flux cross-calibration of the XMM-Newton European Photon Imaging Cameras (EPIC). Aims: We aim to evaluate the status of the relative flux calibration of the EPIC cameras on board the XMM-Newton observatory (MOS1, MOS2, and pn) and investigate the dependence of the calibration on energy (from 0.2 to 12.0 keV), position of the sources in the field of view of the X-ray detectors, and lifetime of the mission. Methods: We compiled the distribution of flux percentage differences for large samples of "good quality" objects detected with at least two of the EPIC cameras. The mean offset of the fluxes and dispersion of the distributions was then found by Gaussian fitting. Count rate to flux conversion was performed with a fixed spectral model. The impact on the results of varying this model was investigated. Results: Excellent agreement was found between the two EPIC MOS cameras to better than 4% over the entire energy range where the EPIC cameras are best calibrated (0.2-12.0 keV). We found that MOS cameras register 7-9% higher flux than EPIC pn below 4.5 keV and a 10-13% flux excess at the highest energies (⪆4.5 keV). No evolution of the flux ratios is seen with time, except at the lowest energies (⪉0.5 keV), where we found a strong decrease in the MOS to pn flux ratio with time. This effect is known to be due to a gradually degrading MOS redistribution function. The flux ratios show some dependence on distance from the optical axis in the sense that the MOS to pn flux excess increases with off-axis angle. Furthermore, in the 4.5-12.0 keV band there is a strong dependence of the MOS to pn excess flux on the azimuthal-angle. These results strongly suggest that the calibration of the Reflection Grating Array (RGA) blocking factors is incorrect at high energies. Finally, we recommend ways to improve the calculation of fluxes in

  11. Potential substitution of mineral P fertilizer by manure: EPIC development and implementation

    NASA Astrophysics Data System (ADS)

    Azevedo, Ligia B.; Vadas, Peter A.; Balkovič, Juraj; Skalský, Rastislav; Folberth, Christian; van der Velde, Marijn; Obersteiner, Michael

    2016-04-01

    Sources of mineral phosphorus (P) fertilizers are non-renewable. Although the longevity of P mines and the risk of future P depletion are highly debated P scarcity may be detrimental to agriculture in various ways. Some of these impacts include increasing food insecurity and nitrogen (N) and P imbalances, serious fluctuations in the global fertilizer and crop market prices, and contribution in geopolitical conflicts. P-rich waste produced from livestock production activities (i.e. manure) are an alternative to mineral P fertilizer. The substitution of mineral fertilizer with manure (1) delays the depletion of phosphate rock stocks, (2) reduces the vulnerability of P fertilizer importing countries to sudden changes in the fertilizer market, (3) reduces the chances of geopolitical conflicts arising from P exploitation pressures, (4) avoids the need for environmental protection policies in livestock systems, (5) is an opportunity for the boosting of crop yields in low nutrient input agricultural systems, and (6) contributes to the inflow of not only P but also other essential nutrients to agricultural soils. The Environmental Policy Integrated Climate model (EPIC) is a widely used process-based, crop model integrating various environmental flows relevant to crop production as well as environmental quality assessments. We simulate crop yields using a powerful computer cluster infra-structure (known as EPIC-IIASA) in combination with spatially-explicit EPIC input data on climate, management, soils, and landscape. EPIC-IIASA contains over 131,000 simulation units and it has 5 arc-min resolution. In this work, we implement two process-based models of manure biogeochemistry into EPIC-IIASA, i.e. SurPhos (for P) and Manure DNDC (for N and carbon) and a fate model model describing nutrient outflows from fertilizer via runoff. For EGU, we will use EPIC-IIASA to quantify the potential of mineral P fertilizer substitution with manure. Specifically, we will estimate the relative

  12. Estimating the nucleotide diversity in Ceratodon purpureus (Ditrichaceae) from 218 conserved exon-primed, intron-spanning nuclear loci1

    PubMed Central

    McDaniel, Stuart F.; van Baren, Marijke J.; Jones, Kelly S.; Payton, Adam C.; Quatrano, Ralph S.

    2013-01-01

    • Premise of the study: We developed and tested primers for 218 nuclear loci for studying population genetics, phylogeography, and genome evolution in bryophytes. • Methods and Results: We aligned expressed sequence tags (ESTs) from Ceratodon purpureus to the Physcomitrella patens genome sequence, and designed primers that are homologous to conserved exons but span introns in the P. patens genome. We tested these primers on four isolates from New York, USA; Otavalo, Ecuador; and two laboratory isolates from Austria (WT4 and GG1). The median genome-wide nucleotide diversity was 0.008 substitutions/site, but the range was large (0–0.14), illustrating the among-locus heterogeneity in the species. • Conclusions: These loci provide a valuable resource for finely resolved, genome-wide population genetic and species-level phylogenetic analyses of C. purpureus and its relatives. PMID:25202534

  13. HPC-EPIC for High Resolution Simulations of Environmental and Sustainability Assessment

    SciTech Connect

    Wang, Dali; Post, Wilfred M; Kang, Shujiang; Nichols, Dr Jeff A

    2011-01-01

    Multiple concerns over the impact of wide scale changes in land management have motivated comprehensive analyses of environmental sustainability of food and biofuel production. These call for high-resolution land management tools that enable comprehensive analyses of natural resources for decision-making. The agroecosystem simulation models with the most biophysical detail are point models, which often have a user interface that allows users to provide inputs and examine results for agricultural field scale analyses. These are not able to meet the needs of high-resolution regional or national simulations. We describe an efficient computational approach for deployment of the Environmental Policy Integrated Climate (EPIC) model at high-resolution spatial scales using high performance computing (HPC) techniques. We developed an integrated procedure for executing the millions of simulations required for high-resolution, regional studies, and also address building databases for model initialization, model forcing data, and model outputs. We first ported EPIC from Windows to an HPC platform and validated output from both platforms. We then developed methods of packaging simulations for efficient, unattended parallel execution on the HPC cluster. The job queuing system, Portable Batch System (PBS) is employed to control job submission. Simulation outputs are extracted to PostgreSQL database for analysis. In a case study covering four counties in central Wisconsin using HPC-EPIC, we finished over 140 K simulations in a total of 10 h on an HPC cluster using 20 nodes. This is a speedup of 40 times. More nodes could be used to achieve larger speedups. The HPC-EPIC model developed in this study is anticipated to provide information useful for high-resolution land use management and decision making. The framework for high-performance computing can be extended to other traditional, point-based biophysical simulation models.

  14. EPIC modeling of soil organic carbon sequestration in croplands of Iowa.

    PubMed

    Causarano, Hector J; Doraiswamy, Paul C; McCarty, Gregory W; Hatfield, Jerry L; Milak, Sushil; Stern, Alan J

    2008-01-01

    Depending on management, soil organic carbon (SOC) is a potential source or sink for atmospheric CO(2). We used the EPIC model to study impacts of soil and crop management on SOC in corn (Zea mays L.) and soybean (Glycine max L. Merr.) croplands of Iowa. The National Agricultural Statistics Service crops classification maps were used to identify corn-soybean areas. Soil properties were obtained from a combination of SSURGO and STATSGO databases. Daily weather variables were obtained from first order meteorological stations in Iowa and neighboring states. Data on crop management, fertilizer application and tillage were obtained from publicly available databases maintained by the NRCS, USDA-Economic Research Service (ERS), and Conservation Technology Information Center. The EPIC model accurately simulated state averages of crop yields during 1970-2005 (R(2) = 0.87). Simulated SOC explained 75% of the variation in measured SOC. With current trends in conservation tillage adoption, total stock of SOC (0-20 cm) is predicted to reach 506 Tg by 2019, representing an increase of 28 Tg with respect to 1980. In contrast, when the whole soil profile was considered, EPIC estimated a decrease of SOC stocks with time, from 1835 Tg in 1980 to 1771 Tg in 2019. Hence, soil depth considered for calculations is an important factor that needs further investigation. Soil organic C sequestration rates (0-20 cm) were estimated at 0.50 to 0.63 Mg ha(-1) yr(-1) depending on climate and soil conditions. Overall, combining land use maps with EPIC proved valid for predicting impacts of management practices on SOC. However, more data on spatial and temporal variation in SOC are needed to improve model calibration and validation.

  15. Modeling Seasons in the Outer Solar System: Enabling EPIC to Roar on 1 Watt

    NASA Astrophysics Data System (ADS)

    Dowling, Timothy E.; Sussman, M. G.; Greathouse, T. K.; Chanover, N. J.

    2012-10-01

    We describe solutions to key technical problems that arise in GCMs when modeling the circulations of Uranus and Neptune, and provide an update to the EPIC model radiative transfer (RT) package, with application to seasonal forcing of Saturn and Uranus. The primary challenges in ice-giant circulation modeling stem from the low value of the solar insolation ( 1 Wm-2), which results in slow ( 10-3 ms-1) meridional-plane circulations that are coupled to fast ( 102 ms-1) zonal winds. Computational modes that are negligible for inner solar-system atmospheric modeling because of high insolation are not negligible for Uranus and Neptune, and hence must be reduced or eliminated. We describe a new, high-order hyperviscosity algorithm that is non-dimensional, efficient, and has well-behaved boundary conditions at the poles. A 12th-order application to Uranus permits EPIC to run for multiple Uranus years without degrading the 11th-order zonal-wind model of Sromovsky et al. (2009). Additional EPIC (Ver. 5.0) improvements include a runtime RT package based on the Greathouse et al. (2010 EGU) Saturn seasonal model that employs our fast and accurate DISORT c_twostr rewrite, a pressure vertical-coordinate option, a dynamic convective adjustment scheme which incorporates improvements to the turbulent Prandtl number by Zilitinkevich et al. (2007), and an accurate analemma, or Sun-in-sky position as a function of time and location on the planet, for Earth, Mars, Jupiter, Saturn, Uranus and Neptune. These improvements make EPIC a versatile tool for dynamic 3D modeling of stratospheric temperatures and hydrocarbon distributions. This research is funded by the NASA Planetary Atmospheres Program, Grant NNX08AEG4G.

  16. Association between socioeconomic and demographic characteristics and utilization of colonoscopy in the EPIC-Heidelberg cohort.

    PubMed

    Hermann, Silke; Friedrich, Susanne; Haug, Ulrike; Rohrmann, Sabine; Becker, Nikolaus; Kaaks, Rudolf

    2015-03-01

    We aimed to describe the utilization of colonoscopy and its association with sociodemographic characteristics within the European Prospective Investigation into Cancer and Nutrition (EPIC)-Heidelberg cohort study. We included 15 014 study participants (43% men) of the EPIC-Heidelberg cohort recruited between 1994 and 1998. At baseline recruitment, as well as in the 3-yearly follow-up surveys, study participants completed questionnaires on lifestyle, socioeconomic background variables, health status, and use of medications and medical services, including colonoscopy examinations. The present analyses focused on participants who completed the question on colonoscopy examination in all follow-up rounds. Our results show that by the end of the fourth follow-up round, more than half of all participants of the EPIC-Heidelberg cohort had had a colonoscopy. Colonoscopy was associated with some socioeconomic and demographic characteristics: a positive association with vocational training level as well as overall socioeconomic status level [International Standard Classification of Education (ISCED) classification]. A negative association was found for household size and employment status. Colonoscopy usage increased steeply within the subgroup of participants older than 55 years of age and decreased again within the subgroup of participants older than 75 years of age. Organized colorectal cancer screening should include a written invitation system, to overcome the problem of sociodemographic-related differential awareness of and attendance at colonoscopy examinations. Also, the high proportion of prescreened individuals should be taken into account to avoid unnecessary re-examinations.

  17. Extended Magnetohydrodynamics with Embedded Particle-in-Cell (XMHD-EPIC) Simulations of Magnetospheric Reconnection

    NASA Astrophysics Data System (ADS)

    Toth, Gabor; Gombosi, Tamas; Jia, Xianzhe; Welling, Daniel; Chen, Yuxi; Haiducek, John; Jordanova, Vania; Peng, Ivy Bo; Markidis, Stefano; Lapenta, Giovanni

    2016-04-01

    We have recently developed a new modeling capability to embed the implicit Particle-in-Cell (PIC) model iPIC3D into the BATS-R-US extended magnetohydrodynamic model. The PIC domain can cover the regions where kinetic effects are most important, such as reconnection sites. The BATS-R-US code with its block-adaptive grid can efficiently handle the rest of the computational domain where the MHD or Hall MHD description is sufficient. The current implementation of the MHD-EPIC model allows two-way coupled simulations in two and three dimensions with multiple embedded PIC regions. The MHD and PIC grids can have different grid resolutions and grid structures. The MHD variables and the moments of the PIC distribution functions are interpolated and message passed in an efficient manner through the Space Weather Modeling Framework (SWMF). Both BATS-R-US and iPIC3D are massively parallel codes fully integrated into, run by and coupled through the SWMF. We have successfully applied the MHD-EPIC code to model Ganymede's and Mercury's magnetospheres. We compared our results with Galileo and MESSENGER magnetic observations, respectively, and found good overall agreement. We will report our progress on modeling the Earth magnetosphere with MHD-EPIC with the goal of providing direct comparison with and global context for the MMS observations.

  18. VizieR Online Data Catalog: K2 EPIC stellar properties for 138600 targets (Huber+, 2016)

    NASA Astrophysics Data System (ADS)

    Huber, D.; Bryson, S. T.; Haas, M. R.; Barclay, T.; Barentsen, G.; Howell, S. B.; Sharma, S.; Stello, D.; Thompson, S. E.

    2016-06-01

    The K2 Mission uses the Kepler spacecraft to obtain high-precision photometry over ~80 day campaigns in the ecliptic plane. The Ecliptic Plane Input Catalog (EPIC) provides coordinates, photometry, and kinematics based on a federation of all-sky catalogs to support target selection and target management for the K2 mission. We describe the construction of the EPIC, as well as modifications and shortcomings of the catalog. Kepler magnitudes (Kp) are shown to be accurate to ~0.1mag for the Kepler field, and the EPIC is typically complete to Kp~17 (Kp~19 for campaigns covered by Sloan Digital Sky Survey). We furthermore classify 138600 targets in Campaigns 1-8 (~88% of the full target sample) using colors, proper motions, spectroscopy, parallaxes, and galactic population synthesis models, with typical uncertainties for G-type stars of ~3% in Teff, ~0.3dex in logg~40% in radius, ~10% in mass, and ~40% in distance. Our results show that stars targeted by K2 are dominated by K-M dwarfs (~41% of all selected targets), F-G dwarfs (~36%), and K giants (~21%), consistent with key K2 science programs to search for transiting exoplanets and galactic archeology studies using oscillating red giants. However, we find significant variation of the fraction of cool dwarfs with galactic latitude, indicating a target selection bias due to interstellar reddening and increased contamination by giant stars near the galactic plane. We discuss possible systematic errors in the derived stellar properties, and differences with published classifications for K2 exoplanet host stars. (1 data file).

  19. Implementation of Epic Beaker Clinical Pathology at an academic medical center

    PubMed Central

    Krasowski, Matthew D.; Wilford, Joseph D.; Howard, Wanita; Dane, Susan K.; Davis, Scott R.; Karandikar, Nitin J.; Blau, John L.; Ford, Bradley A.

    2016-01-01

    Background: Epic Beaker Clinical Pathology (CP) is a relatively new laboratory information system (LIS) operating within the Epic suite of software applications. To date, there have not been any publications describing implementation of Beaker CP. In this report, we describe our experience in implementing Beaker CP version 2012 at a state academic medical center with a go-live of August 2014 and a subsequent upgrade to Beaker version 2014 in May 2015. The implementation of Beaker CP was concurrent with implementations of Epic modules for revenue cycle, patient scheduling, and patient registration. Methods: Our analysis covers approximately 3 years of time (2 years preimplementation of Beaker CP and roughly 1 year after) using data summarized from pre- and post-implementation meetings, debriefings, and the closure document for the project. Results: We summarize positive aspects of, and key factors leading to, a successful implementation of Beaker CP. The early inclusion of subject matter experts in the design and validation of Beaker workflows was very helpful. Since Beaker CP does not directly interface with laboratory instrumentation, the clinical laboratories spent extensive preimplementation effort establishing middleware interfaces. Immediate challenges postimplementation included bar code scanning and nursing adaptation to Beaker CP specimen collection. The most substantial changes in laboratory workflow occurred with microbiology orders. This posed a considerable challenge with microbiology orders from the operating rooms and required intensive interventions in the weeks following go-live. In postimplementation surveys, pathology staff, informatics staff, and end-users expressed satisfaction with the new LIS. Conclusions: Beaker CP can serve as an effective LIS for an academic medical center. Careful planning and preparation aid the transition to this LIS. PMID:26955505

  20. Étalonnage de l'instrument EPIC(XMM). I. Banc d'essai synchrotron

    NASA Astrophysics Data System (ADS)

    Philippe, Marty

    A testing system has been developed at the Institut d'astrophysique spatiale with the Orsay synchrotron facility, in order to perform a full calibration of the EPIC spectro-imaging instrument, which is due to be launched on board the XMM satellite the 21st of January 2000. Dealing with one of the most advanced devices among X-rays detectors using CCD technology, the challenge has been to find the more accurate techniques (cryogenics, high energy optics…) and real-time operating systems (multitask computer environment) to achieve our calibration purposes.

  1. Incorporation of a PbSe Array Based Spectrograph into EPICS using LabView at the JLab FEL Facility

    SciTech Connect

    D. Hardy; S.V. Benson; Michelle D. Shinn; S. Zhang

    2005-08-21

    A real-time spectrograph with a 1Hz update rate was designed and installed at the JLab FEL facility using a Cal Sensors PbSe array and a Roper Scientific SpectraPro 300 monochrometer. This paper describes the implementation of EPICS channel access on a remote PC running LabView with modification of vendor supplied LabView VI's to allow display of FEL light spectra in real-time on a remote workstation. This allows PC based diagnostics to be used in EPICS.

  2. EPIC: A C++ Service Oriented Inter-process Messaging Framework and its Usage in the PFS Reduction Pipeline

    NASA Astrophysics Data System (ADS)

    Vidal, C.; Chabaud, P.-Y.

    2015-09-01

    We present EPIC: a C++ library for managing inter process communication in the Prime Focus Spectrograph Data Reduction Pipeline (PFS/DRP). The aim of EPIC is to provide a consistent framework for building distributed softwares that can be efficiently used in various kind of astronomical data processing pipeline. The Prime Focus Spectrograph multi-fiber system will allow more than 2000 simultaneous spectral observations of astronomical targets at the same time, leading the need of a high throughput system for processing data reduction of each observations. This framework provide a load balanced, messages and services oriented system, where nodes communicate with each other using a set of C++ APIs.

  3. 75 FR 12230 - Black Oak Energy, L.L.C., EPIC Merchant Energy, LP, SESCO Enterprises, LLC v. PJM Interconnection...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-03-15

    ... Energy Regulatory Commission Black Oak Energy, L.L.C., EPIC Merchant Energy, LP, SESCO Enterprises, LLC v. PJM Interconnection, L.L.C.; Notice of Filing March 8, 2010. Take notice that on March 1, 2010, PJM Interconnection, L.L.C. filed a report of refund pursuant to the Federal Energy Regulatory...

  4. “Nitrogen Budgets for the Mississippi River Basin using the linked EPIC-CMAQ-NEWS Models”

    EPA Science Inventory

    Presentation on the results from the 3 linked models, EPIC (USDA), CMAQ and NEWS to analyze a scenario of increased corn production related to biofuels together with Clean Air Act emission reductions across the US and the resultant effect on nitrogen loading to the Gulf of Mexico...

  5. Intrarectal Amifostine During External Beam Radiation Therapy for Prostate Cancer Produces Significant Improvements in Quality of Life Measured by EPIC Score

    SciTech Connect

    Simone, Nicole L.; Menard, Cynthia; Soule, Benjamin P.; Albert, Paul S.; Guion, Peter; Smith, Sharon; Godette, Denise; Crouse, Nancy S.; Sciuto, Linda C.; Cooley-Zgela, Theresa; Camphausen, Kevin; Coleman, C. Norman; Singh, Anurag K. E-mail: singan@mail.nih.gov

    2008-01-01

    Purpose: To test whether intrarectal amifostine limits symptoms of radiation proctitis, measured by using the Radiation Therapy Oncology Group (RTOG) gastrointestinal (GI) toxicity score and the Expanded Prostate Cancer Index Composite (EPIC) score. Methods and Materials: Patients with localized prostate cancer received amifostine as a rectal suspension 30-45 minutes before daily three-dimensional conformal radiation therapy. The first 18 patients received 1 g of amifostine, and the next 12 patients received 2 g. Toxicity was assessed at baseline, during treatment, and at follow-up visits by using RTOG grading and the EPIC Quality of Life (QoL) 50-item questionnaire. The Bowel Function subset of the bowel domain (EPIC-BF), which targets symptom severity, and the Bowel Bother subset of the bowel domain (EPIC-BB), which assesses QoL, were evaluated and compared with the RTOG GI toxicity score. Results: Median follow-up was 30 months (range, 18-36 months). Overall, EPIC-BF and EPIC-BB scores both tracked closely with the RTOG GI toxicity score. Seven weeks after the start of radiation therapy, the incidence of RTOG Grade 2 toxicity was 33% in the 1-g group (6/18 patients) compared with 0% (0/12 patients) in the 2-g group and trended toward statistical significance (p = 0.06). A significant difference between amifostine groups was observed using the EPIC-BF score at 7 weeks (p = 0.04). A difference in EPIC-BB scores between dose groups was evident at 7 weeks (p = 0.07) and was significant at 12 months (p = 0.04). Conclusions: Higher doses of amifostine produced significant improvements in acute and late bowel QoL (up to 1 year after therapy), measured using the EPIC score.

  6. Development and application of the EPIC model for carbon cycle, greenhouse-gas mitigation, and biofuel studies

    SciTech Connect

    Izaurralde, Roberto C.; Mcgill, William B.; Williams, J.R.

    2012-06-01

    This chapter provides a comprehensive review of the EPIC model in relation to carbon cycle, greenhouse-gas mitigation, and biofuel applications. From its original capabilities and purpose (i.e., quantify the impacts or erosion on soil productivity), the EPIC model has evolved into a comprehensive terrestrial ecosystem model for simulating with more or less process-level detail many ecosystem processes such as weather, hydrology, plant growth and development, carbon cycle (including erosion), nutrient cycling, greenhouse-gas emissions, and the most complete set of manipulations that can be implemented on a parcel of land (e.g. tillage, harvest, fertilization, irrigation, drainage, liming, burning, pesticide application). The chapter also provides details and examples of the latest efforts in model development such as the coupled carbon-nitrogen model, a microbial denitrification model with feedback to the carbon decomposition model, updates on calculation of ecosystem carbon balances, and carbon emissions from fossil fuels. The chapter has included examples of applications of the EPIC model in soil carbon sequestration, net ecosystem carbon balance, and biofuel studies. Finally, the chapter provides the reader with an update on upcoming improvements in EPIC such as the additions of modules for simulating biochar amendments, sorption of soluble C in subsoil horizons, nitrification including the release of N2O, and the formation and consumption of methane in soils. Completion of these model development activities will render an EPIC model with one of the most complete representation of biogeochemical processes and capable of simulating the dynamic feedback of soils to climate and management in terms not only of transient processes (e.g., soil water content, heterotrophic respiration, N2O emissions) but also of fundamental soil properties (e.g. soil depth, soil organic matter, soil bulk density, water limits).

  7. Observations of transits of K2 exoplanet discoveries EPIC 203371098b&c

    NASA Astrophysics Data System (ADS)

    Werner, Michael; Gorjian, Varoujan; Beichmani, Charles; Akeson, Rachel; Ciardi, Dave; Christiansen, Jessie; Crossfield, Ian; Petigura, Erik; Krick, Jessica

    2015-08-01

    We request DDT time to observe transits of two super-Neptune planets orbiting a bright G star, EPIC 203371098. Erik Petigura has brought to our attention a particularly interesting K2 discovery that consists of two sub-Saturn-sized planets (5.9 RE and 7.8 RE) orbiting EPIC-203371098, a bright G star (K = 9.2). The orbital periods of the planets are 20.9 d and 42.4 d, respectively. The planets have sizes between that of Neptune and Saturn; sizes not represented among the Solar System planets. Due to the brightness of the host star, this system is an ideal laboratory to study this new class of planets. Over the past two months, our team has conducted radial velocity (RV) follow up of EPIC-203371098 with Keck/HIRES. Our preliminary measurements suggest these planets have low densities, ~0.6 g/cc and ~0.4 g/cc, respectively. Low planet masses translate into larger atmospheric scale heights, which sets the amplitude of the features in planet transmission spectra. The apparent commensurability of their orbits suggest that this is a resonant system where transit timing variations may be particularly large. Our Spitzer observations, compared with the previous K2 first epoch observations, can provide initial evidence for TTVs and set the stage for future campaigns from Spitzer and other telescopes which will independently determine the planetary masses; they will also pin down the ephemerides of these interesting planets - including the hard to capture orbital eccentricity - for possible JWST study.It is important to carry out these observations in the upcoming apparition of this star in the October-December time frame because multiple observations are required for accurate studies of TTVs, and to prevent secular errors in timing from building up to a point where the system is hard to recover. The size of these planets and the brightness of the star shows us that we will achieve S/N>20 per transit on each planet.We will propose to observe one transit of each planet

  8. EPICS Exploration

    ERIC Educational Resources Information Center

    Anderson, Sherry

    2005-01-01

    With a satisfying "Whoompf!" the air cannon sends a tennis ball the length of the school gym. The successful launch is met with cheers from the science club members and their partners--college engineering students from a local university. This air cannon activity was one of many learning opportunities that grew out of a partnership between the…

  9. Cultural Trauma and Christian Identity in the Late Medieval Heroic Epic, The Siege of Jerusalem.

    PubMed

    DeMarco, Patricia A

    2015-01-01

    This essay examines scenes of violence in the late medieval poem The Siege of Jerusalem in order to reveal the ways in which trauma is used as the grounds upon which Christian/Jewish difference is established. In particular, I argue that this poem serves as an example of a widespread element in Christian chivalric identity, namely the need to manage the repetitive invocation of Christ's crucifixion (ritually repeated through liturgical and poetic invocation) as a means of asserting both the bodily and psychic integrity of the Christian subject in contrast to the violently abjected figure of the Jewish body. The failure of The Siege protagonist, Wespasian, to navigate the cultural trauma of the crucifixion is contrasted to the successful management of trauma by the martial hero, Tancred, in Tasso's epic, Gerusalemme Liberata, illustrating the range of imaginative possibilities for understanding trauma in pre-modern war literature.

  10. Implementation of an EPICS IOC on an Embedded Soft Core Processor Using Field Programmable Gate Arrays

    SciTech Connect

    Douglas Curry; Alicia Hofler; Hai Dong; Trent Allison; J. Hovater; Kelly Mahoney

    2005-09-20

    At Jefferson Lab, we have been evaluating soft core processors running an EPICS IOC over {mu}Clinux on our custom hardware. A soft core processor is a flexible CPU architecture that is configured in the FPGA as opposed to a hard core processor which is fixed in silicon. Combined with an on-board Ethernet port, the technology incorporates the IOC and digital control hardware within a single FPGA. By eliminating the general purpose computer IOC, the designer is no longer tied to a specific platform, e.g. PC, VME, or VXI, to serve as the intermediary between the high level controls and the field hardware. This paper will discuss the design and development process as well as specific applications for JLab's next generation low-level RF controls and Machine Protection Systems.

  11. HPC-EPIC for High Resolution Simulations of Environmental and Sustainability Assessment

    SciTech Connect

    Nichols, Jeffrey A.; Kang, Shujiang; Post, W. M.; Wang, Dali; Bandaru, Varaprasad; Manowitz, David H.; Zhang, Xuesong; Izaurralde, Roberto C.

    2011-11-01

    Multiple concerns over the impact of wide scale changes in land management have motivated comprehensive analyses of environmental sustainability of food and biofuel production. These call for high-resolution, spatial-temporal information of lands using tools that enable comprehensive analyses of natural resources for decision-making. Most agroecosystem simulation models are point models with a user interface that allows users to provide inputs and examine results for agricultural field scale analyses, and they aren’t able to meet the needs of the regional and national simulation with high spatial resolutions. We describe an efficient computational approach over deployment of the Environmental Policy Integrated Climate (EPIC) model at high-resolution scales using a high performance computing (HPC) technique in this study. We concentrate on an integrated procedure for executing millions of simulations required, but also address building databases for model initialization and forcing the simulations, and post-processing model outputs.

  12. Massively parallel sequencing of single cells by epicPCR links functional genes with phylogenetic markers.

    PubMed

    Spencer, Sarah J; Tamminen, Manu V; Preheim, Sarah P; Guo, Mira T; Briggs, Adrian W; Brito, Ilana L; A Weitz, David; Pitkänen, Leena K; Vigneault, Francois; Juhani Virta, Marko P; Alm, Eric J

    2016-02-01

    Many microbial communities are characterized by high genetic diversity. 16S ribosomal RNA sequencing can determine community members, and metagenomics can determine the functional diversity, but resolving the functional role of individual cells in high throughput remains an unsolved challenge. Here, we describe epicPCR (Emulsion, Paired Isolation and Concatenation PCR), a new technique that links functional genes and phylogenetic markers in uncultured single cells, providing a throughput of hundreds of thousands of cells with costs comparable to one genomic library preparation. We demonstrate the utility of our technique in a natural environment by profiling a sulfate-reducing community in a freshwater lake, revealing both known sulfate reducers and discovering new putative sulfate reducers. Our method is adaptable to any conserved genetic trait and translates genetic associations from diverse microbial samples into a sequencing library that answers targeted ecological questions. Potential applications include identifying functional community members, tracing horizontal gene transfer networks and mapping ecological interactions between microbial cells. PMID:26394010

  13. 2014 consensus statement from the first Economics of Physical Inactivity Consensus (EPIC) conference (Vancouver).

    PubMed

    Davis, Jennifer C; Verhagen, Evert; Bryan, Stirling; Liu-Ambrose, Teresa; Borland, Jeff; Buchner, David; Hendriks, Marike R C; Weiler, Richard; Morrow, James R; van Mechelen, Willem; Blair, Steven N; Pratt, Mike; Windt, Johann; al-Tunaiji, Hashel; Macri, Erin; Khan, Karim M

    2014-06-01

    This article describes major topics discussed from the 'Economics of Physical Inactivity Consensus Workshop' (EPIC), held in Vancouver, Canada, in April 2011. Specifically, we (1) detail existing evidence on effective physical inactivity prevention strategies; (2) introduce economic evaluation and its role in health policy decisions; (3) discuss key challenges in establishing and building health economic evaluation evidence (including accurate and reliable costs and clinical outcome measurement) and (4) provide insight into interpretation of economic evaluations in this critically important field. We found that most methodological challenges are related to (1) accurately and objectively valuing outcomes; (2) determining meaningful clinically important differences in objective measures of physical inactivity; (3) estimating investment and disinvestment costs and (4) addressing barriers to implementation. We propose that guidelines specific for economic evaluations of physical inactivity intervention studies are developed to ensure that related costs and effects are robustly, consistently and accurately measured. This will also facilitate comparisons among future economic evidence.

  14. The peculiar dipping events in the disk-bearing young-stellar object EPIC 204278916

    NASA Astrophysics Data System (ADS)

    Scaringi, S.; Manara, C. F.; Barenfeld, S. A.; Groot, P. J.; Isella, A.; Kenworthy, M. A.; Knigge, C.; Maccarone, T. J.; Ricci, L.; Ansdell, M.

    2016-08-01

    EPIC 204278916 has been serendipitously discovered from its K2 light curve which displays irregular dimmings of up to 65% for ≈25 consecutive days out of 78.8 days of observations. For the remaining duration of the observations, the variability is highly periodic and attributed to stellar rotation. The star is a young, low-mass (M-type) pre-main-sequence star with clear evidence of a resolved tilted disk from ALMA observations. We examine the K2 light curve in detail and hypothesise that the irregular dimmings are caused by either a warped inner-disk edge or transiting cometary-like objects in either circular or eccentric orbits. The explanations discussed here are particularly relevant for other recently discovered young objects with similar absorption dips.

  15. Massively parallel sequencing of single cells by epicPCR links functional genes with phylogenetic markers

    PubMed Central

    Spencer, Sarah J; Tamminen, Manu V; Preheim, Sarah P; Guo, Mira T; Briggs, Adrian W; Brito, Ilana L; A Weitz, David; Pitkänen, Leena K; Vigneault, Francois; Virta, Marko PJuhani; Alm, Eric J

    2016-01-01

    Many microbial communities are characterized by high genetic diversity. 16S ribosomal RNA sequencing can determine community members, and metagenomics can determine the functional diversity, but resolving the functional role of individual cells in high throughput remains an unsolved challenge. Here, we describe epicPCR (Emulsion, Paired Isolation and Concatenation PCR), a new technique that links functional genes and phylogenetic markers in uncultured single cells, providing a throughput of hundreds of thousands of cells with costs comparable to one genomic library preparation. We demonstrate the utility of our technique in a natural environment by profiling a sulfate-reducing community in a freshwater lake, revealing both known sulfate reducers and discovering new putative sulfate reducers. Our method is adaptable to any conserved genetic trait and translates genetic associations from diverse microbial samples into a sequencing library that answers targeted ecological questions. Potential applications include identifying functional community members, tracing horizontal gene transfer networks and mapping ecological interactions between microbial cells. PMID:26394010

  16. Massively parallel sequencing of single cells by epicPCR links functional genes with phylogenetic markers.

    PubMed

    Spencer, Sarah J; Tamminen, Manu V; Preheim, Sarah P; Guo, Mira T; Briggs, Adrian W; Brito, Ilana L; A Weitz, David; Pitkänen, Leena K; Vigneault, Francois; Juhani Virta, Marko P; Alm, Eric J

    2016-02-01

    Many microbial communities are characterized by high genetic diversity. 16S ribosomal RNA sequencing can determine community members, and metagenomics can determine the functional diversity, but resolving the functional role of individual cells in high throughput remains an unsolved challenge. Here, we describe epicPCR (Emulsion, Paired Isolation and Concatenation PCR), a new technique that links functional genes and phylogenetic markers in uncultured single cells, providing a throughput of hundreds of thousands of cells with costs comparable to one genomic library preparation. We demonstrate the utility of our technique in a natural environment by profiling a sulfate-reducing community in a freshwater lake, revealing both known sulfate reducers and discovering new putative sulfate reducers. Our method is adaptable to any conserved genetic trait and translates genetic associations from diverse microbial samples into a sequencing library that answers targeted ecological questions. Potential applications include identifying functional community members, tracing horizontal gene transfer networks and mapping ecological interactions between microbial cells.

  17. Contrast-enhanced microCT (EPIC-µCT) ex vivo applied to the mouse and human jaw joint

    PubMed Central

    Mulder, L; Lin, A S; Langenbach, G E J; Koolstra, J H; Guldberg, R E; Everts, V

    2014-01-01

    Objectives: The temporomandibular joint (TMJ) is susceptive to the development of osteoarthritis (OA). More detailed knowledge of its development is essential to improve our insight into TMJ-OA. It is imperative to have a standardized reliable three-dimensional (3D) imaging method that allows for detailed assessment of both bone and cartilage in healthy and diseased joints. We aimed to determine the applicability of a contrast-enhanced microCT (µCT) technique for ex vivo research of mouse and human TMJs. Methods: Equilibrium partitioning of an ionic contrast agent via µCT (EPIC-µCT) was previously applied for cartilage assessment in the knee joint. The method was ex vivo, applied to the mouse TMJ and adapted for the human TMJ. Results: EPIC-µCT (30-min immersion time) was applied to mouse mandibular condyles, and 3D imaging revealed an average cartilage thickness of 110 ± 16 µm. These measurements via EPIC-µCT were similar to the histomorphometric measures (113 ± 19 µm). For human healthy OA-affected TMJ samples, the protocol was adjusted to an immersion time of 1 h. 3D imaging revealed a significant thicker cartilage layer in joints with early signs of OA compared with healthy joints (414.2 ± 122.6 and 239.7 ± 50.5 µm, respectively). A subsequent significant thinner layer was found in human joints with late signs of OA (197.4 ± 159.7 µm). Conclusions: The EPIC-µCT technique is effective for the ex vivo assessment of 3D cartilage morphology in the mouse as well as human TMJ and allows bone–cartilage interaction research in TMJ-OA. PMID:24353248

  18. The Electric Propulsion Interactions Code (EPIC): A Member of the NASA Space Environment and Effects Program (SEE) Toolset

    NASA Technical Reports Server (NTRS)

    Mikellides, Ioannis G.; Mandell, Myron J.; Kuharski, Robert A.; Davis, D. A.; Gardner, Barbara M.; Minor, Jody

    2003-01-01

    Science Applications International Corporation is currently developing the Electric Propulsion Interactions Code, EPIC, as part of a project sponsored by the Space Environments and Effects Program at NASA Marshall Space Flight Center. Now in its second year of development, EPIC is an interactive computer toolset that allows the construction of a 3-D spacecraft model, and the assessment of a variety of interactions between its subsystems and the plume from an electric thruster. This paper reports on the progress of EPZC including the recently added ability to exchange results the NASA Charging Analyzer Program, Nascap-2k. The capability greatly enhances EPIC's range of applicability. Expansion of the toolset's various physics models proceeds in parallel with the overall development of the software. Also presented are recent upgrades of the elastic scattering algorithm in the electric propulsion Plume Tool. These upgrades are motivated by the need to assess the effects of elastically scattered ions on the SIC for ion beam energies that exceed loo0 eV. Such energy levels are expected in future high-power (>10 kW) ion propulsion systems empowered by nuclear sources.

  19. Measuring and Predicting Prostate Cancer Related Quality of Life Changes using the Expanded Prostate Cancer Index Composite for Clinical Practice (EPIC-CP)

    PubMed Central

    Chipman, Jonathan J.; Sanda, Martin G.; Dunn, Rodney L.; Wei, John T.; Litwin, Mark S.; Crociani, Catrina M.; Regan, Meredith M.; Chang, Peter

    2016-01-01

    Purpose To expand the clinical usefulness of the Expanded Prostate Cancer Index Composite for Clinical Practice (EPIC-CP) by evaluating its responsiveness to health related quality of life (HRQOL) changes, defining the minimally important differences (MID) for an individual patient's change in each domain, and applying it to a sexual outcome prediction model. Methods In 1,201 subjects from a previously described multi-center, longitudinal cohort, we modeled each treatment group's EPIC-CP domain scores at pre-treatment, short-term, and long-term follow-up. We considered post-treatment domain score changes from pre-treatment ≥ 0.5 standard deviations (SD) clinically significant and with a p-value ≤ 0.01 as statistically significant. We determined domain MIDs using the 0.5 pooled SD of the 2, 6, 12, and 24 month post-treatment changes from pre-treatment. We recalibrated an EPIC-CP-based nomogram model predicting 2-year post-prostatectomy functional erections from that developed using EPIC-26. Results For every HRQOL domain, EPIC-CP was sensitive to similar post-treatment HRQOL changes over time as had been observed using EPIC-26. The EPIC-CP MIDs for changes in the urinary incontinence, urinary irritation/obstruction, bowel, sexual, and vitality/hormonal domains are 1.0, 1.3, 1.2, 1.6, and 1.0, respectively. The EPIC-CP-based sexual prediction model performs well (AUC=0.76) and shows robust agreement with its EPIC-26-based counterpart, with predicted probability differences between models of ≤10% for 95% of individuals and a mean difference of 0.0 (SD=0.05) across all individuals. Conclusions EPIC-CP is responsive to HRQOL changes during convalescence, and can be used to predict 2-year post-prostatectomy sexual outcomes. Its use can facilitate shared medical decision-making and patient-centered care. PMID:24076307

  20. Convection and Easterly Wave Structure Observed in the Eastern Pacific Warm-Pool during EPIC-2001

    NASA Technical Reports Server (NTRS)

    Peterson, Walter A.; Cifelli, R.; Boccippio, D.; Rutledge, S. A.; Fairall, C. W.; Arnold, James E. (Technical Monitor)

    2002-01-01

    During September-October 2001, the East Pacific Investigation of Climate Processes in the Coupled Ocean-Atmosphere System (EPIC-2001) ITCZ field campaign focused on studies of deep convection in the warm-pool region of the East Pacific. In addition to the TAO mooring array, observational platforms deployed during the field phase included the NOAA ship RN Ronald H. Brown, the NSF ship RN Horizon, and the NOAA P-3 and NCAR C-130 aircraft. This study combines C-band Doppler radar, rawinsonde, and surface heat flux data collected aboard the RN Brown to describe ITCZ convective structure and rainfall statistics in the eastern Pacific as a function of 3-5 day easterly wave phase. Three distinct easterly wave passages occurred during EPIC-2001. Wind and thermodynamic data reveal that the wave trough axes exhibited positively correlated U and V winds and a slight westward phase tilt with height. A relatively strong (weak) northeasterly deep tropospheric shear followed the trough (ridge) axis. Temperature and humidity perturbations exhibited mid-to upper level cooling (warming) and drying (moistening) in the northerly (trough and southerly) phase. At low levels warming (cooling) occurred in the northerly (southerly) phase with little change in the relative humidity, though mixed layer mixing ratios were larger during the northerly phase. When composited, radar, sounding, lightning and surface heat flux observations suggest the following systematic behavior as a function of wave phase: approximately zero to one quarter wavelength ahead of (behind) the wave trough in northerly (southerly) flow, larger (smaller) CAPE, lower (higher) CIN, weaker (stronger) tropospheric shear, higher (lower) conditional mean rain rates, higher (lower) lightning flash densities, and more (less) robust convective vertical structure occurred. Latent and sensible heat fluxes reached a minimum in the northerly phase and then increased through the trough, reaching a peak during the ridge phase

  1. The new SCOS-based EGSE of the EPIC flight-spare on-ground cameras

    NASA Astrophysics Data System (ADS)

    La Palombara, Nicola; Abbey, Anthony; Insinga, Fernando; Calderon-Riano, Pedro; Casale, Mauro; Kirsch, Marcus; Martin, James; Munoz, Ramon; Palazzo, Maddalena; Poletti, Mauro; Sembay, Steve; Vallejo, Juan C.; Villa, Gabriele

    2014-07-01

    The XMM-Newton observatory, launched by the European Space Agency in 1999, is still one of the scientific community's most important high-energy astrophysics missions. After almost 15 years in orbit its instruments continue to operate smoothly with a performance close to the immediate post-launch status. The competition for the observing time remains very high with ESA reporting a very healthy over-subscription factor. Due to the efficient use of spacecraft consumables XMM-Newton could potentially be operated into the next decade. However, since the mission was originally planned for 10 years, progressive ageing and/or failures of the on-board instrumentation can be expected. Dealing with them could require substantial changes of the on-board operating software, and of the command and telemetry database, which could potentially have unforeseen consequences for the on-board equipment. In order to avoid this risk, it is essential to test these changes on ground, before their upload. To this aim, two flight-spare cameras of the EPIC experiment (one MOS and one PN) are available on-ground. Originally they were operated through an Electrical Ground Support Equipment (EGSE) system which was developed over 15 years ago to support the test campaigns up to the launch. The EGSE used a specialized command language running on now obsolete workstations. ESA and the EPIC Consortium, therefore, decided to replace it with new equipment in order to fully reproduce on-ground the on-board configuration and to operate the cameras with SCOS2000, the same Mission Control System used by ESA to control the spacecraft. This was a demanding task, since it required both the recovery of the detailed knowledge of the original EGSE and the adjustment of SCOS for this special use. Recently this work has been completed by replacing the EGSE of one of the two cameras, which is now ready to be used by ESA. Here we describe the scope and purpose of this activity, the problems faced during its

  2. XMM-Newton EPIC observations of 21 low-redshift PG quasars

    NASA Astrophysics Data System (ADS)

    Porquet, D.; Reeves, J. N.; O'Brien, P.; Brinkmann, W.

    2004-07-01

    We present an X-ray spectral analysis of 21 low redshift quasars observed with XMM-Newton EPIC. All the sources are Palomar Green quasars with redshifts between 0.05 and 0.4 and have low Galactic absorption along the line-of-sight. A large majority of quasars in the sample (19/21) exhibit a significant soft excess below ˜1-1.5 keV, whilst two objects (PG 1114+445 and I Zw1) show a deficit of soft X-ray flux due to the presence of a strong warm absorber. Indeed, contrary to previous studies with ASCA and ROSAT, we find that the presence of absorption features near 0.6-1.0 keV is common in our sample. At least half of the objects appear to harbor a warm absorber, as found previously in Seyfert 1 galaxies. We find significant detections of Fe Kα emission lines in at least twelve objects, whilst there is evidence for some broadening of the line profile, compared to the EPIC-pn resolution, in five of these quasars. The determination of the nature of this broadening (e.g., Keplerian motion, a blend of lines, relativistic effects) is not possible with the present data and requires either higher S/N or higher resolution spectra. In seven objects the line is located between 6.7-7 keV, corresponding to highly ionized iron, whereas in the other five objects the line energy is consistent with 6.4 keV, i.e. corresponding to near neutral iron. The ionized lines tend to be found in the quasars with the steepest X-ray spectra. We also find a correlation between the continuum power law index Γ and the optical Hβ width, in both the soft and hard X-ray bands, whereby the steepest X-ray spectra are found in objects with narrow Hβ widths, which confirms previous ROSAT and ASCA results. The soft and hard band X-ray photon indices are also strongly correlated, i.e. the steepest soft X-ray spectra correspond the steepest hard X-ray spectra. We propose that a high accretion rate and a smaller black hole mass is likely to be the physical driver responsible for these trends, with the

  3. Marking Time:The Epic Quest to Invent the Perfect Calendar

    NASA Astrophysics Data System (ADS)

    Staid, Matthew

    The arrival of the new millennium has renewed interest in the evolution of our modern calendar. Unraveling the story of this evolution requires extensive knowledge of science, history, and religion. Most of us have little understanding of how the date of Easter is determined, or why we celebrate the New Year on January 1st. In Marking Time: The Epic Quest to Invent the Perfect Calendar, Duncan Steel takes readers on a revealing, meandering trip from several millennia B.C. to the present. As the author states, “By the time you finish reading this tome…it will be clear that the calendar has had much greater effect upon human destiny than you may have fondly imagined. It's not just about numbering the days: it's about the rises and falls of empires and religions…about controlling the masses and subverting your rivals. The calendar story is one of human strife and aspirations.” And so Steel reveals how our calendar is based as much on religion and politics as it is on physical science.

  4. A good Darwinian? Winwood Reade and the making of a late Victorian evolutionary epic.

    PubMed

    Hesketh, Ian

    2015-06-01

    In 1871 the travel writer and anthropologist W. Winwood Reade (1838-1875) was inspired by his correspondence with Darwin to turn his narrow ethnological research on West African tribes into the broadest history imaginable, one that would show Darwin's great principle of natural selection at work throughout the evolutionary history of humanity, stretching back to the origins of the universe itself. But when Martyrdom of Man was published in 1872, Reade confessed that Darwin would not likely find him a very good Darwinian, as he was unable to show that natural selection was anything more than a secondary law that arranges all details. When it came to historicising humans within the sweeping history of all creation, Reade argued that the primary law was that of development, a less contentious theory of human evolution that was better suited to Reade's progressive and teleological history of life. By focussing on the extensive correspondence between Reade and Darwin, this paper reconstructs the attempt to make an explicitly Darwinian evolutionary epic in order to shed light on the moral and aesthetic demands that worked to give shape to Victorian efforts to historicise humans within a vastly expanding timeframe.

  5. Programming PLCS under EPICS at the SNS Project : Further Experiences in Collaboration

    SciTech Connect

    P. A. Gurd; W. H. Strong; J. D. Creel

    2003-10-01

    The Spallation Neutron Source (SNS) is an accelerator-based neutron source being built in Tennessee by a partnership of six national laboratories. The control system components for the SNS were produced by personnel at the collaborating laboratories, by vendors of the equipment, and by commercial contractors. A number of different approaches were used to provide the programming for both the programmable logic controllers (PLCs) and the input-output controllers (IOCs) which were all based on the Experimental Physics and Industrial Control System (EPICS). For conventional facilities, both the PLCs and the IOCs were programmed under a commercial contract. The PLCs for the high power radio frequency system (HPRF) were programmed by the vendors of the equipment, while the IOCs were programmed by the collaborating laboratory. Finally, while the IOCs for the cryogenic systems were programmed at Oak Ridge, three different approaches were used to produce the PLC programming: some were programmed at Oak Ridge, some at TJNAF, and some at vendor sites. This paper discusses the status of the PLCs in the control system and the integration challenges encountered in the various approaches.

  6. Dietary lipids and geriatric depression scale score among elders: the EPIC-Greece cohort.

    PubMed

    Kyrozis, A; Psaltopoulou, T; Stathopoulos, P; Trichopoulos, D; Vassilopoulos, D; Trichopoulou, A

    2009-05-01

    In a prospective epidemiological investigation aiming to identify dietary lipids potentially associated with affective state and depression, 610 healthy men and women aged 60 years or older, participating in the EPIC-Greece cohort and residing in the Attika region had dietary, sociodemographic, anthropometric, medical and lifestyle variables ascertained at enrollment. Six to 13 years later, affective state was evaluated through the 15-point geriatric depression scale (GDS) score along with cognitive function and medical variables. In multivariate linear regression analysis, while adjusting for potential confounders, GDS score was negatively associated with dietary intake of monounsaturated lipids (MUFA) and their main source, olive oil, and positively associated with intake of polyunsaturated lipids (PUFA) and one of their principal sources, seed oils. Intake of calories, total lipids, fish and seafood or saturated lipids did not exhibit significant association with GDS. Potential non-linearities were assessed by quantile multivariate regression analysis: The median GDS score was positively associated with PUFA and seed oils intake, while other lipid groups showed no appreciable associations. The 90th percentile of the GDS score (towards the high end) exhibited significant negative associations with MUFA and olive oil, weaker positive associations with PUFA and seed oils and no appreciable association with other lipid group dietary intakes. We conclude that among Attika elders, lower intake of seed oils and higher intake of olive oil prospectively predict a healthier affective state. Olive oil intake, in particular, predicts a lower chance of scoring in the highest part of the GDS. PMID:18952225

  7. Dietary lipids and geriatric depression scale score among elders: the EPIC-Greece cohort.

    PubMed

    Kyrozis, A; Psaltopoulou, T; Stathopoulos, P; Trichopoulos, D; Vassilopoulos, D; Trichopoulou, A

    2009-05-01

    In a prospective epidemiological investigation aiming to identify dietary lipids potentially associated with affective state and depression, 610 healthy men and women aged 60 years or older, participating in the EPIC-Greece cohort and residing in the Attika region had dietary, sociodemographic, anthropometric, medical and lifestyle variables ascertained at enrollment. Six to 13 years later, affective state was evaluated through the 15-point geriatric depression scale (GDS) score along with cognitive function and medical variables. In multivariate linear regression analysis, while adjusting for potential confounders, GDS score was negatively associated with dietary intake of monounsaturated lipids (MUFA) and their main source, olive oil, and positively associated with intake of polyunsaturated lipids (PUFA) and one of their principal sources, seed oils. Intake of calories, total lipids, fish and seafood or saturated lipids did not exhibit significant association with GDS. Potential non-linearities were assessed by quantile multivariate regression analysis: The median GDS score was positively associated with PUFA and seed oils intake, while other lipid groups showed no appreciable associations. The 90th percentile of the GDS score (towards the high end) exhibited significant negative associations with MUFA and olive oil, weaker positive associations with PUFA and seed oils and no appreciable association with other lipid group dietary intakes. We conclude that among Attika elders, lower intake of seed oils and higher intake of olive oil prospectively predict a healthier affective state. Olive oil intake, in particular, predicts a lower chance of scoring in the highest part of the GDS.

  8. Chemical enrichment in the hot intra-cluster medium seen with XMM-Newton/EPIC

    NASA Astrophysics Data System (ADS)

    Mernier, F.; de Plaa, J.; Pinto, C.; Kaastra, J.; Kosec, P.; Zhang, Y.; Mao, J.; Werner, N.

    2016-06-01

    The intra-cluster medium (ICM), permeating the large gravitational potential well of galaxy clusters and groups, is rich in metals, which can be detected via their emission lines in the soft X-ray band. These heavy elements (typically from O to Ni) have been synthesized by Type Ia (SNIa) and core-collapse (SNcc) supernovae within the galaxy members, and continuously enrich the ICM since the cosmic star formation peak (z ≃ 2-3). Because the predicted chemical yields of supernovae depend on either their explosion mechanisms (SNIa) or the initial mass and metallicity of their progenitors (SNcc), measuring the abundances in the ICM can help to constrain supernovae models. In this study, we use XMM-Newton/EPIC to measure the abundances of 9 elements (Mg, Si, S, Ar, Ca, Cr, Mn, Fe and Ni) in a sample of 44 cool-core galaxy clusters, groups and ellipticals (the CHEERS catalog). Combining these results with the O and Ne abundances measured using RGS, we establish an average X/Fe abundance pattern in the ICM, and we determine the best-fit SNIa and SNcc models, as well as the relative fraction of SNIa/SNcc responsible for the enrichment.

  9. Droughts, epic droughts and droughty centuries - lessons from a California paleoclimatic record: a PACLIM 2001 meeting report

    USGS Publications Warehouse

    Dettinger, M.D.

    2001-01-01

    During the early 1990s (but echoing studies by S.T. Harding at the University of California, from as early as the 1930s), several lines of paleoclimate evidence in and around the Sierra Nevada Range have provided the water community in California with some real horror stories. By studying ancient tree stumps submerged in Lake Tahoe and Tenaya Lake, stumps that were emerging from Mono Lake during its recent decline, and stumps that were exhumed in the Walker River bed during the floods of 1997, paleoclimatologists like Scott Stine of California State University, Hayward, assembled a picture of epic droughts in the central Sierra Nevada during the medieval period. These droughts had to be severe to drop water levels in the lakes and rivers low enough for the trees to grow in the first place, and then had to last for hundreds of years to explain tree-ring counts in these sizeable stumps. Worse yet, the evidence suggested at least two such epic droughts, one ending close to 1100 and the other close to 1350. These epic droughts challenged paleoclimatologists, as well as modern climatologists and hydrologists, to understand and, ultimately, to determine the likelihood that such droughts might recur in the foreseeable future. The first challenge, however, was to verify that such droughts were more than local events and as extreme as suggested. At this year’s Pacific Climate (PACLIM) Workshop, held March 18–21, 2001, at Asilomar (Pacific Grove, Calif.), special sessions brought together scientists to compare paleoclimatic reconstructions of ancient droughts and pluvial (wet) epidodes to try to determine the nature of decadal and centennial climate fluctuations in western North America, with emphasis on California. A companion session brought together modern climatologists to report on the latest explanations (and evidence) for decadal climate variations during the instrumental era of the 20th century.

  10. Dietary intake of acrylamide and epithelial ovarian cancer risk in the european prospective investigation into cancer and nutrition (EPIC) cohort.

    PubMed

    Obón-Santacana, Mireia; Peeters, Petra H M; Freisling, Heinz; Dossus, Laure; Clavel-Chapelon, Françoise; Baglietto, Laura; Schock, Helena; Fortner, Renée T; Boeing, Heiner; Tjønneland, Anne; Olsen, Anja; Overvad, Kim; Menéndez, Virginia; Sanchez, Maria-José; Larrañaga, Nerea; Huerta Castaño, José María; Barricarte, Aurelio; Khaw, Kay-Tee; Wareham, Nick; Travis, Ruth C; Merritt, Melissa A; Trichopoulou, Antonia; Trichopoulos, Dimitrios; Orfanos, Philippos; Masala, Giovanna; Sieri, Sabina; Tumino, Rosario; Vineis, Paolo; Mattiello, Amalia; Bueno-de-Mesquita, H B; Onland-Moret, N Charlotte; Wirfält, Elisabeth; Stocks, Tanja; Idahl, Annika; Lundin, Eva; Skeie, Guri; Gram, Inger T; Weiderpass, Elisabete; Riboli, Elio; Duell, Eric J

    2015-01-01

    Acrylamide, classified in 1994 by the International Agency for Research on Cancer (IARC) as "probably carcinogenic" to humans, was discovered in 2002 in some heat-treated, carbohydrate-rich foods. The association between dietary acrylamide intake and epithelial ovarian cancer risk (EOC) has been previously studied in one case-control and three prospective cohort studies which obtained inconsistent results and could not further examine histologic subtypes other than serous EOC. The present study was carried out in the European Prospective Investigation into Cancer and Nutrition (EPIC) subcohort of women (n = 325,006). Multivariate Cox proportional hazards models were used to assess the association between questionnaire-based acrylamide intake and EOC risk. Acrylamide was energy-adjusted using the residual method and was evaluated both as a continuous variable (per 10 μg/d) and in quintiles; when subgroups by histologic EOC subtypes were analyzed, acrylamide intake was evaluated in quartiles. During a mean follow-up of 11 years, 1,191 incident EOC cases were diagnosed. At baseline, the median acrylamide intake in EPIC was 21.3 μg/d. No associations and no evidence for a dose-response were observed between energy-adjusted acrylamide intake and EOC risk (HR10μg/d,1.02; 95% CI, 0.96-1.09; HRQ5vsQ1, 0.97; 95% CI, 0.76-1.23). No differences were seen when invasive EOC subtypes (582 serous, 118 endometrioid, and 79 mucinous tumors) were analyzed separately. This study did not provide evidence that acrylamide intake, based on food intake questionnaires, was associated with risk for EOC in EPIC. Additional studies with more reliable estimates of exposure based on biomarkers may be needed.

  11. ANALOG I/O MODULE TEST SYSTEM BASED ON EPICS CA PROTOCOL AND ACTIVEX CA INTERFACE

    SciTech Connect

    YENG,YHOFF,L.

    2003-10-13

    Analog input (ADC) and output (DAC) modules play a substantial role in device level control of accelerator and large experiment physics control system. In order to get the best performance some features of analog modules including linearity, accuracy, crosstalk, thermal drift and so on have to be evaluated during the preliminary design phase. Gain and offset error calibration and thermal drift compensation (if needed) may have to be done in the implementation phase as well. A natural technique for performing these tasks is to interface the analog VO modules and GPIB interface programmable test instruments with a computer, which can complete measurements or calibration automatically. A difficulty is that drivers of analog modules and test instruments usually work on totally different platforms (vxworks VS Windows). Developing new test routines and drivers for testing instruments under VxWorks (or any other RTOS) platform is not a good solution because such systems have relatively poor user interface and developing such software requires substantial effort. EPICS CA protocol and ActiveX CA interface provide another choice, a PC and LabVIEW based test system. Analog 110 module can be interfaced from LabVIEW test routines via ActiveX CA interface. Test instruments can be controlled via LabVIEW drivers, most of which are provided by instrument vendors or by National Instruments. Labview also provides extensive data analysis and process functions. Using these functions, users can generate powerful test routines very easily. Several applications built for Spallation Neutron Source (SNS) Beam Loss Monitor (BLM) system are described in this paper.

  12. Smoking, Smoking Cessation, and Risk of Tooth Loss: The EPIC-Potsdam Study.

    PubMed

    Dietrich, T; Walter, C; Oluwagbemigun, K; Bergmann, M; Pischon, T; Pischon, N; Boeing, H

    2015-10-01

    The aim of this study was to investigate the association between cigarette smoking and smoking cessation and the prevalence and incidence of tooth loss in a large cohort study in Germany. We analyzed data of 23,376 participants of the European Prospective Investigation into Cancer and Nutrition (EPIC)-Potsdam study recruited between 1994 and 1998 from the general population in Potsdam and other parts of Brandenburg, Germany, who had complete data on cigarette smoking, tooth loss, and covariates. Negative binomial regression and tooth-specific logistic regression models were fit to evaluate the association between smoking and the baseline prevalence and incidence of tooth loss during follow-up, respectively. Cigarette smoking was associated with higher prevalence of tooth loss at baseline as well as higher incidence of tooth loss during follow-up. The association between smoking and the incidence of tooth loss was stronger in men than women and stronger in younger versus older individuals. Heavy smoking (≥15 cigarettes/d) was associated with >3 times higher risk of tooth loss in men (odds ratio, 3.6; 95% confidence interval, 3.0, 4.4) and more than twice the risk of tooth loss in women (odds ratio, 2.5; 95% confidence interval, 2.1, 2.9) younger than 50 y when compared with never smokers. Smoking cessation was consistently associated with a reduction in tooth loss risk, with the risk of tooth loss approaching that of never smokers after approximately 10 to 20 y of cessation.

  13. Inflammatory markers and risk of epithelial ovarian cancer by tumor subtypes: the EPIC cohort

    PubMed Central

    Ose, Jennifer; Schock, Helena; Tjonneland, Anne; Hansen, Louise; Overvad, Kim; Dossus, Laure; Clavel-Chapelon, Francoise; Baglietto, Laura; Boeing, Heiner; Trichopolou, Antonia; Benetou, Vassiliki; Lagiou, Pagona; Masala, Giovanna; Tagliabue, Giovanna; Tumino, Rosario; Sacerdote, Carlotta; Mattiello, Amalia; de Mesquita, H.Bas Bueno; Peeters, Petra H M; Onland-Moret, N Charlotte; Weiderpass, Elisabete; Gram, Inger T; Sánchez, Soledad; Obon-Santacana, Mireia; Sànchez-Pérez, Maria-José; Larrañaga, Nerea; Castaño, José María Huerta; Ardanaz, Eva; Brändstedt, Jenny; Lundin, Eva; Idahl, Annika; Travis, Ruth C; Khaw, Kay-Tee; Rinaldi, Sabina; Romieu, Isabelle; Merrit, Melissa A; Gunter, Marc J; Riboli, Elio; Kaaks, Rudolf; Fortner, Renée T

    2015-01-01

    Background Evidence suggests an etiologic role for inflammation in ovarian carcinogenesis and heterogeneity between tumor subtypes and anthropometric indices. Prospective studies on circulating inflammatory markers and epithelial invasive ovarian cancer (EOC) have predominantly investigated overall risk; data characterizing risk by tumor characteristics (histology, grade, stage, dualistic model of ovarian carcinogenesis) and anthropometric indices are sparse. Methods We conducted a nested case-control study in the European Prospective Investigation into Cancer and Nutrition (EPIC) cohort to evaluate C-reactive protein (CRP), interleukin-6 (IL-6), and EOC risk by tumor characteristics. A total of 754 eligible EOC cases were identified; two controls (n=1,497) were matched per case. We used multivariable conditional logistic regression to assess associations. Results CRP and IL-6 were not associated with overall EOC risk. However, consistent with prior research, CRP >10 vs. CRP ≤1 mg/L was associated with higher overall EOC risk (OR=1.67 [1.03 - 2.70]). We did not observe significant associations or heterogeneity in analyses by tumor characteristics. In analyses stratified by waist circumference, inflammatory markers were associated with higher risk among women with higher waist circumference; no association was observed for women with normal waist circumference: (e.g., IL-6: waist ≤80: ORlog2=0.97 [0.81 - 1.16]; waist >88: ORlog2=1.78 [1.28 - 2.48], pheterogeneity ≤0.01). Conclusions Our data suggest that high CRP is associated with increased risk of overall EOC, and that IL-6 and CRP may be associated with EOC risk among women with higher adiposity. Impact Our data add to global evidence that ovarian carcinogenesis may be promoted by an inflammatory milieu. PMID:25855626

  14. Laser Scanning Tomography in the EPIC-Norfolk Eye Study: Principal Components and Associations

    PubMed Central

    Khawaja, Anthony P.; Chan, Michelle P. Y.; Broadway, David C.; Garway-Heath, David F.; Luben, Robert; Yip, Jennifer L. Y.; Hayat, Shabina; Khaw, Kay-Tee; Foster, Paul J.

    2013-01-01

    Purpose. To describe Heidelberg Retina Tomograph (HRT) measures, their principal components, and their associations in a British population. Methods. The European Prospective Investigation of Cancer (EPIC)-Norfolk Eye Study is nested within a multicenter cohort study. Measurements were taken with the HRT-2 and the software subsequently updated to yield HRT-3 parameters. Principal components analysis (PCA) was used to identify distinct components of the HRT variables. Generalized estimating equation models were used to examine associations of these components with age, sex, height, body mass index (BMI), blood pressure, social class, education, alcohol intake, smoking status, axial length, IOP, and lens status. Results. Complete data were available from 10,859 eyes of 6430 participants with a mean age of 68 years. Principal components analysis identified three components with an eigenvalue greater than 1, explaining 79.9% of the variance of all the HRT measures. These were named cup, retinal nerve fiber layer (RNFL), and rim based on the factor loadings they were most correlated with. Older age was significantly associated with a greater cup (P = 0.003), smaller RNFL (P < 0.001), and smaller rim (P < 0.001). Female sex (P = 0.001), higher education (P < 0.001), and shorter axial length (P < 0.001) were associated with a greater RNFL. Lower BMI and higher IOP were associated with a greater cup (both, P < 0.001) and a smaller rim (BMI, P = 0.001; IOP, P < 0.001). Conclusions. Heidelberg Retina Tomograph measures in this cohort were largely explained by three principal components related to optic disc cup, RNFL, and rim. Associations with cup and rim were distinct to associations with RNFL, suggesting different underlying determinants. PMID:24030456

  15. Dietary Total Antioxidant Capacity and Colorectal Cancer in the Italian EPIC Cohort

    PubMed Central

    Vece, Marilena Monica; Agnoli, Claudia; Grioni, Sara; Sieri, Sabina; Pala, Valeria; Pellegrini, Nicoletta; Frasca, Graziella; Tumino, Rosario; Mattiello, Amalia; Panico, Salvatore; Bendinelli, Benedetta; Masala, Giovanna; Ricceri, Fulvio; Sacerdote, Carlotta; Krogh, Vittorio

    2015-01-01

    Background Colorectal cancer is the third most common cancer worldwide. Diet has been hypothesized as involved in colorectal cancer etiology, but few studies on the influence of total dietary antioxidant intake on colorectal cancer risk have been performed. Methods We investigated the association between colorectal cancer risk and the total antioxidant capacity (TAC) of the diet, and also of intake of selected antioxidants, in 45,194 persons enrolled in 5 centers (Florence, Naples, Ragusa, Turin and Varese) of the European Prospective Investigation into Cancer and Nutrition (EPIC) Italy study. TAC was estimated by the Trolox equivalent antioxidant capacity (TEAC) assay. Hazard ratios (HRs) for developing colorectal cancer, and colon and rectal cancers separately, adjusted for confounders, were estimated for tertiles of TAC by Cox modeling, stratifying by center. Results Four hundred thirty-six colorectal cancers were diagnosed over a mean follow-up of 11.28 years. No significant association between dietary TAC and colorectal cancer incidence was found. However for the highest category of TAC compared to the lowest, risk of developing colon cancer was lower (HR: 0.63; 95% CI: 0.44–0.89, P trend: 0.008). By contrast, increasing TAC intake was associated with significantly increasing risks of rectal cancer (2nd tertile HR: 2.09; 95%CI: 1.19–3.66; 3rd tertile 2.48 95%CI: 1.32–4.66; P trend 0.007). Intakes of vitamin C, vitamin E, and ß-carotene were not significantly associated with colorectal cancer risk. Conclusions Further prospective studies are needed to confirm the contrasting effects of high total antioxidant intake on risk of colon and rectal cancers. PMID:26565695

  16. Glycemic index, glycemic load and mammographic breast density: the EPIC Florence longitudinal study.

    PubMed

    Masala, Giovanna; Assedi, Melania; Bendinelli, Benedetta; Ermini, Ilaria; Occhini, Daniela; Sieri, Sabina; Brighenti, Furio; Del Turco, Marco Rosselli; Ambrogetti, Daniela; Palli, Domenico

    2013-01-01

    A few studies have evaluated the association between diet and mammographic breast density (MBD) and results are inconsistent. MBD, a well-recognized risk factor for breast cancer, has been proposed as a marker of cumulative exposure to hormones and growth factors. Diets with a high glycemic index (GI) or glycemic load (GL) may increase breast cancer risk, via an effect on the insulin-like growth factor axis. We have investigated the association between carbohydrate intake, GI, GL and MBD in a prospective study. We identified a large series of women, in the frame of the EPIC-Florence cohort, with a mammogram taken five years after enrolment, when detailed information on dietary and lifestyle habits and anthropometric measurements had been collected. Mammograms have been retrieved (1,668, 83%) and MBD assessed according to Wolfe's classification. We compared women with high MBD (P2+DY Wolfe's categories) with those with low MBD (N1+P1) through logistic models adjusted for age, education, body mass index, menopause, number of children, breast feeding, physical activity, non-alcohol energy, fibers, saturated fat and alcohol. A direct association between GL and high MBD emerged in the highest quintile of intake in comparison with the lowest quintile (OR = 1.73, 95%CI 1.13-2.67, p for trend = 0.048) while no association with glycemic index was evident. These results were confirmed after exclusion of women reporting to be on a diet or affected with diabetes, and when Hormone Replacement Therapy at the date of mammographic examination used to assess MBD was considered. The effect was particularly evident among leaner women, although no interaction was found. A positive association was suggested for increasing simple sugar and total carbohydrates intakes limited to the highest quintiles. In this Italian population we observed an association between glycemic load, total and rapidly absorbed carbohydrates and high MBD. These novel results warrant further investigations. PMID

  17. Diet, metabolic polymorphisms and dna adducts: the EPIC-Italy cross-sectional study.

    PubMed

    Palli, D; Vineis, P; Russo, A; Berrino, F; Krogh, V; Masala, G; Munnia, A; Panico, S; Taioli, E; Tumino, R; Garte, S; Peluso, M

    2000-08-01

    DNA adducts in peripheral leukocytes are considered a reliable indicator of internal dose exposure to genotoxic agents and, possibly, of cancer risk. We investigated their association with diet and other individual characteristics in healthy adults. The prospective study EPIC-Italy, a section of a larger European project, enrolled 47,749 men and women, aged 35-64 years, in 5 centres: all provided individual information about dietary and life-style habits and a blood sample. In a cross-sectional study, approximately 100 volunteers were randomly selected from each of the three main geographical study areas (Northern, Central and Southern Italy). DNA adducts and four polymorphic metabolic genotypes were determined in peripheral leukocytes by using (32)P-postlabelling technique and PCR methods. Among 309 subjects (153 men), 72.8% had detectable levels of DNA adducts (mean: 8.1 +/- 0.6 per 10(9) nucleotides). Strong negative associations emerged with the reported frequency of consumption of fresh fruit and vegetables, olive oil, and the intake of antioxidants. DNA adducts were higher in subjects with GSTT1 null genotype (p = 0.05). Significant differences between study centres emerged in multivariate analyses (mean levels: 11.0, 10.0, 7.2, 6.5 and 5.2 for Florence, Naples, Turin, Varese and Ragusa, respectively). A possible opposite seasonal variation was found according to latitude: adduct levels tended to be lower in winter in Florence and the southern centres, and during summer in the two northern centres. Frequent consumption of fresh fruit and vegetables is associated with reduced levels of DNA adducts, possibly contributing to the role of diet in modulating cancer risk. PMID:10897053

  18. Diet, metabolic polymorphisms and dna adducts: the EPIC-Italy cross-sectional study.

    PubMed

    Palli, D; Vineis, P; Russo, A; Berrino, F; Krogh, V; Masala, G; Munnia, A; Panico, S; Taioli, E; Tumino, R; Garte, S; Peluso, M

    2000-08-01

    DNA adducts in peripheral leukocytes are considered a reliable indicator of internal dose exposure to genotoxic agents and, possibly, of cancer risk. We investigated their association with diet and other individual characteristics in healthy adults. The prospective study EPIC-Italy, a section of a larger European project, enrolled 47,749 men and women, aged 35-64 years, in 5 centres: all provided individual information about dietary and life-style habits and a blood sample. In a cross-sectional study, approximately 100 volunteers were randomly selected from each of the three main geographical study areas (Northern, Central and Southern Italy). DNA adducts and four polymorphic metabolic genotypes were determined in peripheral leukocytes by using (32)P-postlabelling technique and PCR methods. Among 309 subjects (153 men), 72.8% had detectable levels of DNA adducts (mean: 8.1 +/- 0.6 per 10(9) nucleotides). Strong negative associations emerged with the reported frequency of consumption of fresh fruit and vegetables, olive oil, and the intake of antioxidants. DNA adducts were higher in subjects with GSTT1 null genotype (p = 0.05). Significant differences between study centres emerged in multivariate analyses (mean levels: 11.0, 10.0, 7.2, 6.5 and 5.2 for Florence, Naples, Turin, Varese and Ragusa, respectively). A possible opposite seasonal variation was found according to latitude: adduct levels tended to be lower in winter in Florence and the southern centres, and during summer in the two northern centres. Frequent consumption of fresh fruit and vegetables is associated with reduced levels of DNA adducts, possibly contributing to the role of diet in modulating cancer risk.

  19. EPICE-HIV: An Epidemiologic Cost-Effectiveness Model for HIV Treatment

    PubMed Central

    Vandewalle, Björn; Llibre, Josep M.; Parienti, Jean-Jacques; Ustianowski, Andrew; Camacho, Ricardo; Smith, Colette; Miners, Alec; Ferreira, Diana; Félix, Jorge

    2016-01-01

    The goal of this research was to establish a new and innovative framework for cost-effectiveness modeling of HIV-1 treatment, simultaneously considering both clinical and epidemiological outcomes. EPICE-HIV is a multi-paradigm model based on a within-host micro-simulation model for the disease progression of HIV-1 infected individuals and an agent-based sexual contact network (SCN) model for the transmission of HIV-1 infection. It includes HIV-1 viral dynamics, CD4+ T cell infection rates, and pharmacokinetics/pharmacodynamics modeling. Disease progression of HIV-1 infected individuals is driven by the interdependent changes in CD4+ T cell count, changes in plasma HIV-1 RNA, accumulation of resistance mutations and adherence to treatment. The two parts of the model are joined through a per-sexual-act and viral load dependent probability of disease transmission in HIV-discordant couples. Internal validity of the disease progression part of the model is assessed and external validity is demonstrated in comparison to the outcomes observed in the STaR randomized controlled clinical trial. We found that overall adherence to treatment and the resulting pattern of treatment interruptions are key drivers of HIV-1 treatment outcomes. Our model, though largely independent of efficacy data from RCT, was accurate in producing 96-week outcomes, qualitatively and quantitatively comparable to the ones observed in the STaR trial. We demonstrate that multi-paradigm micro-simulation modeling is a promising tool to generate evidence about optimal policy strategies in HIV-1 treatment, including treatment efficacy, HIV-1 transmission, and cost-effectiveness analysis. PMID:26870960

  20. EPICE-HIV: An Epidemiologic Cost-Effectiveness Model for HIV Treatment.

    PubMed

    Vandewalle, Björn; Llibre, Josep M; Parienti, Jean-Jacques; Ustianowski, Andrew; Camacho, Ricardo; Smith, Colette; Miners, Alec; Ferreira, Diana; Félix, Jorge

    2016-01-01

    The goal of this research was to establish a new and innovative framework for cost-effectiveness modeling of HIV-1 treatment, simultaneously considering both clinical and epidemiological outcomes. EPICE-HIV is a multi-paradigm model based on a within-host micro-simulation model for the disease progression of HIV-1 infected individuals and an agent-based sexual contact network (SCN) model for the transmission of HIV-1 infection. It includes HIV-1 viral dynamics, CD4+ T cell infection rates, and pharmacokinetics/pharmacodynamics modeling. Disease progression of HIV-1 infected individuals is driven by the interdependent changes in CD4+ T cell count, changes in plasma HIV-1 RNA, accumulation of resistance mutations and adherence to treatment. The two parts of the model are joined through a per-sexual-act and viral load dependent probability of disease transmission in HIV-discordant couples. Internal validity of the disease progression part of the model is assessed and external validity is demonstrated in comparison to the outcomes observed in the STaR randomized controlled clinical trial. We found that overall adherence to treatment and the resulting pattern of treatment interruptions are key drivers of HIV-1 treatment outcomes. Our model, though largely independent of efficacy data from RCT, was accurate in producing 96-week outcomes, qualitatively and quantitatively comparable to the ones observed in the STaR trial. We demonstrate that multi-paradigm micro-simulation modeling is a promising tool to generate evidence about optimal policy strategies in HIV-1 treatment, including treatment efficacy, HIV-1 transmission, and cost-effectiveness analysis. PMID:26870960

  1. Long-term mortality of hospitalized pneumonia in the EPIC-Norfolk cohort.

    PubMed

    Myint, P K; Hawkins, K R; Clark, A B; Luben, R N; Wareham, N J; Khaw, K-T; Wilson, A M

    2016-03-01

    Little is known about cause-specific long-term mortality beyond 30 days in pneumonia. We aimed to compare the mortality of patients with hospitalized pneumonia compared to age- and sex-matched controls beyond 30 days. Participants were drawn from the European Prospective Investigation into Cancer (EPIC)-Norfolk prospective population study. Hospitalized pneumonia cases were identified from record linkage (ICD-10: J12-J18). For this study we excluded people with hospitalized pneumonia who died within 30 days. Each case identified was matched to four controls and followed up until the end June 2012 (total 15 074 person-years, mean 6·1 years, range 0·08-15·2 years). Cox regression models were constructed to examine the all-cause, respiratory and cardiovascular mortality using date of pneumonia onset as baseline with binary pneumonia status as exposure. A total of 2465 men and women (503 cases, 1962 controls) [mean age (s.d.) 64·5 (8·3) years] were included in the study. Between a 30-day to 1-year period, hazard ratios (HRs) of all-cause and cardiovascular mortality were 7·3 [95% confidence interval (CI) 5·4-9·9] and 5·9 (95% CI 3·5-9·7), respectively (with very few respiratory deaths within the same period) in cases compared to controls after adjusting for age, sex, asthma, smoking status, pack years, systolic and diastolic blood pressure, diabetes, physical activity, waist-to-hip ratio, prevalent cardiovascular and respiratory diseases. All outcomes assessed also showed increased risk of death in cases compared to controls after 1 year; respiratory cause of death being the most significant during that period (HR 16·4, 95% CI 8·9-30·1). Hospitalized pneumonia was associated with increased all-cause and specific-cause mortality beyond 30 days.

  2. A calibration procedure to improve global rice yield simulations with EPIC

    SciTech Connect

    Xiong, Wei; Balkovic, Juraj; van der Velde, M.; Zhang, Xuesong; Izaurralde, Roberto C.; Skalsky, Rastislav; Lin, Erda; Mueller, Nathan; Obersteiner, Michael

    2014-02-01

    Crop models are increasingly used to assess impacts of climate change/variability and management practices on productivity and environmental performance of alternative cropping systems. Calibration is an important procedure to improve reliability of model simulations, especially for large area applications. However, global-scale crop model calibration has rarely been exercised due to limited data availability and expensive computing cost. Here we present a simple approach to calibrate Environmental Policy Integrated Climate (EPIC) model for a global implementation of rice. We identify four parameters (potential heat unit – PHU, planting density – PD, harvest index – HI, and biomass energy ratio – BER) and calibrate them regionally to capture the spatial pattern of reported rice yield in 2000. Model performance is assessed by comparing simulated outputs with independent FAO national data. The comparison demonstrates that the global calibration scheme performs satisfactorily in reproducing the spatial pattern of rice yield, particularly in main rice production areas. Spatial agreement increases substantially when more parameters are selected and calibrated, but with varying efficiencies. Among the parameters, PHU and HI exhibit the highest efficiencies in increasing the spatial agreement. Simulations with different calibration strategies generate a pronounced discrepancy of 5–35% in mean yields across latitude bands, and a small to moderate difference in estimated yield variability and yield changing trend for the period of 1981–2000. Present calibration has little effects in improving simulated yield variability and trends at both regional and global levels, suggesting further works are needed to reproduce temporal variability of reported yields. This study highlights the importance of crop models’ calibration, and presents the possibility of a transparent and consistent up scaling approach for global crop simulations given current availability of

  3. Thermal Design and Analysis of a Multi-Stage 30K Radiative Cooling System for EPIC

    NASA Technical Reports Server (NTRS)

    Chui, Talso; Bock, Jamie; Holmes, Warren; Raab, Jeff

    2009-01-01

    The Experimental Probe of Inflationary Cosmology (EPIC) is an implementation of the NASA Einstein Inflation Probe mission, to answer questions about the physics of Inflation in the early Universe by measuring the polarization of the Cosmic Microwave Background (CMB). The mission relies on a passive cooling system to cool the enclosure of a telescope to 30 K; a cryocooler then cools this enclosure to 18 K and the telescope to 4 K. Subsequently, an adiabatic demagnetization refrigerator further cools a large focal plane to approx.100 mK. For this mission, the telescope has an aperture of 1.4 m, and the spacecraft's symmetry axis is oriented approx. 45 degrees relative to the direction of the sun. The spacecraft will be spun at approx. 0.5 rpm around this axis, which then precesses on the sky at 1 rph. The passive system must both supply the necessary cooling power for the cryocooler and meet demanding temperature stability requirements. We describe the thermal design of a passive cooling system consisting of four V-groove radiators for shielding of solar radiation and cooling the telescope to 30 K. The design realizes loads of 20 and 68 mW at the 4 K and 18 K stages on the cooler, respectively. A lower cost option for reaching 40 K with three V-groove radiators is also described. The analysis includes radiation coupling between stages of the radiators and sunshields, and parasitic conduction in the bipod support, harnesses, and ADR leads. Dynamic effects are also estimated, including the very small variations in temperature due to the scan motion of the spacecraft.

  4. Insect Resistance to Bacillus thuringiensis Toxin Cry2Ab Is Conferred by Mutations in an ABC Transporter Subfamily A Protein

    PubMed Central

    Tay, Wee Tek; Mahon, Rod J.; Heckel, David G.; Walsh, Thomas K.; Downes, Sharon; James, William J.; Lee, Sui-Fai; Reineke, Annette; Williams, Adam K.; Gordon, Karl H. J.

    2015-01-01

    The use of conventional chemical insecticides and bacterial toxins to control lepidopteran pests of global agriculture has imposed significant selection pressure leading to the rapid evolution of insecticide resistance. Transgenic crops (e.g., cotton) expressing the Bt Cry toxins are now used world wide to control these pests, including the highly polyphagous and invasive cotton bollworm Helicoverpa armigera. Since 2004, the Cry2Ab toxin has become widely used for controlling H. armigera, often used in combination with Cry1Ac to delay resistance evolution. Isolation of H. armigera and H. punctigera individuals heterozygous for Cry2Ab resistance in 2002 and 2004, respectively, allowed aspects of Cry2Ab resistance (level, fitness costs, genetic dominance, complementation tests) to be characterised in both species. However, the gene identity and genetic changes conferring this resistance were unknown, as was the detailed Cry2Ab mode of action. No cross-resistance to Cry1Ac was observed in mutant lines. Biphasic linkage analysis of a Cry2Ab-resistant H. armigera family followed by exon-primed intron-crossing (EPIC) marker mapping and candidate gene sequencing identified three independent resistance-associated INDEL mutations in an ATP-Binding Cassette (ABC) transporter gene we named HaABCA2. A deletion mutation was also identified in the H. punctigera homolog from the resistant line. All mutations truncate the ABCA2 protein. Isolation of further Cry2Ab resistance alleles in the same gene from field H. armigera populations indicates unequal resistance allele frequencies and the potential for Bt resistance evolution. Identification of the gene involved in resistance as an ABC transporter of the A subfamily adds to the body of evidence on the crucial role this gene family plays in the mode of action of the Bt Cry toxins. The structural differences between the ABCA2, and that of the C subfamily required for Cry1Ac toxicity, indicate differences in the detailed mode

  5. Insect Resistance to Bacillus thuringiensis Toxin Cry2Ab Is Conferred by Mutations in an ABC Transporter Subfamily A Protein.

    PubMed

    Tay, Wee Tek; Mahon, Rod J; Heckel, David G; Walsh, Thomas K; Downes, Sharon; James, William J; Lee, Sui-Fai; Reineke, Annette; Williams, Adam K; Gordon, Karl H J

    2015-11-01

    The use of conventional chemical insecticides and bacterial toxins to control lepidopteran pests of global agriculture has imposed significant selection pressure leading to the rapid evolution of insecticide resistance. Transgenic crops (e.g., cotton) expressing the Bt Cry toxins are now used world wide to control these pests, including the highly polyphagous and invasive cotton bollworm Helicoverpa armigera. Since 2004, the Cry2Ab toxin has become widely used for controlling H. armigera, often used in combination with Cry1Ac to delay resistance evolution. Isolation of H. armigera and H. punctigera individuals heterozygous for Cry2Ab resistance in 2002 and 2004, respectively, allowed aspects of Cry2Ab resistance (level, fitness costs, genetic dominance, complementation tests) to be characterised in both species. However, the gene identity and genetic changes conferring this resistance were unknown, as was the detailed Cry2Ab mode of action. No cross-resistance to Cry1Ac was observed in mutant lines. Biphasic linkage analysis of a Cry2Ab-resistant H. armigera family followed by exon-primed intron-crossing (EPIC) marker mapping and candidate gene sequencing identified three independent resistance-associated INDEL mutations in an ATP-Binding Cassette (ABC) transporter gene we named HaABCA2. A deletion mutation was also identified in the H. punctigera homolog from the resistant line. All mutations truncate the ABCA2 protein. Isolation of further Cry2Ab resistance alleles in the same gene from field H. armigera populations indicates unequal resistance allele frequencies and the potential for Bt resistance evolution. Identification of the gene involved in resistance as an ABC transporter of the A subfamily adds to the body of evidence on the crucial role this gene family plays in the mode of action of the Bt Cry toxins. The structural differences between the ABCA2, and that of the C subfamily required for Cry1Ac toxicity, indicate differences in the detailed mode

  6. Identification of polymorphic and off-target probe binding sites on the Illumina Infinium MethylationEPIC BeadChip.

    PubMed

    McCartney, Daniel L; Walker, Rosie M; Morris, Stewart W; McIntosh, Andrew M; Porteous, David J; Evans, Kathryn L

    2016-09-01

    Genome-wide analysis of DNA methylation has now become a relatively inexpensive technique thanks to array-based methylation profiling technologies. The recently developed Illumina Infinium MethylationEPIC BeadChip interrogates methylation at over 850,000 sites across the human genome, covering 99% of RefSeq genes. This array supersedes the widely used Infinium HumanMethylation450 BeadChip, which has permitted insights into the relationship between DNA methylation and a wide range of conditions and traits. Previous research has identified issues with certain probes on both the HumanMethylation450 BeadChip and its predecessor, the Infinium HumanMethylation27 BeadChip, which were predicted to affect array performance. These issues concerned probe-binding specificity and the presence of polymorphisms at target sites. Using in silico methods, we have identified probes on the Infinium MethylationEPIC BeadChip that are predicted to (i) measure methylation at polymorphic sites and (ii) hybridise to multiple genomic regions. We intend these resources to be used for quality control procedures when analysing data derived from this platform. PMID:27330998

  7. Potential scientific output from the visible channels of EPIC spectroradiometer as part of the DSCOVR L1 mission

    NASA Astrophysics Data System (ADS)

    Marshak, A.; Herman, J. R.

    2011-12-01

    In addition to 4 UV channels, the EPIC spectroradiometer will provide measurements at 6 visible (and near IR) channels (443, 551, 680, 687.75, 764 and 779.9 nm) at roughly 10 km spatial resolution. The scattering angles are near backscattering and vary between 165 and 176 degree. Two pairs {680 and 687.75 nm} and {764 and 779.9 nm} represent O2 B- and A-bands (and their reference) channels; they will be used for cloud height measurements over land and ocean. The B-band channel will contribute to the more absorbing A-band measurements over bright vegetation. A pair {680 and 779.9 nm} will be used for retrieving vegetation properties. Due to the special EPIC geometry, the illuminated part of the leaves will be always observed. As a result, in additional to the traditional Leaf Area Index (LAI), these observations for the first time will provide the sunlit fraction of LAI. Since the sunlit and shaded leaves exhibit different photosynthetic response to incident photosynthetically active radiation (PAR), these measurements will help to improve global ecological and biogeochemistry models. Finally, a pair {443 and 551 nm} will be used for atmospheric correction. As a by-product of the atmospheric correction algorithm, we also expect to get aerosol optical thickness (AOT) and surface bidirectional reflection function (BRF). The presentation will briefly overview the proposed science algorithms.

  8. Potential Scientific Output from the Visible Channels of EPIC Spectroradiometer as Part of the DSCOVR L1 Mission

    NASA Technical Reports Server (NTRS)

    Marshak, Alexander; Herman, Jay

    2011-01-01

    In addition to 4 UV channels, the EPIC spectroradiometer will provide measurements at 6 visible (and near IR) channels (443,551,680,687.75, 764 and 779.9 nm) at roughly 10 km spatial resolution. The scattering angles are near backscattering and vary between 165 and 176 degree. Two pairs {680 and 687.75 nm} and {764 and 779.9 nm} represent 02 B- and A-bands (and their references) channels; they will be used for cloud height measurements over land and ocean. The B-band channel will contribute to the more absorbing A-band measurements over bright vegetation. A pair {680 and 779.9 nm} will be used for retrieving vegetation properties. Due to the special EPIC geometry, the illuminated part of the leaves will be always observed. As a result, in additional to the traditional Leaf Area Index (LAI), these observations for the first time will provide the sunlit fraction of LAI. Since the sunlit and shaded leaves exhibit different photosynthetic response to incident radiation, these measurements will help to improve global ecological and biogeochemistry models. Finally, a pair {443 and 551 nm} will be used for atmospheric correction. As a by-product of the atmospheric correction algorithm, we also expect to get aerosol optical thickness (AOT) and surface bidirectional reflection function (BRF). The presentation will briefly overview the proposed science algorithms.

  9. The socio-cultural perception of death in Turkish society recorded in lament epics (1955-1975).

    PubMed

    Izgi, M Cumhur; Abdulla, Tarana; Çoban, Mustafa; Onay, Ebru; Lutz, E Elif Vatanaoglu

    This study explores the socio-cultural perception of death among Turkish people. For this reason, 210 published lament epics written by Turkish folk singers across all of Turkey concerning deaths between 1955 and 1975 were selected for analysis. These epics were published on single pages and were sold. The statistical analysis based on detailed content analysis was done at the univariate, bivariate, and multivariate levels. The results of the study provide a full picture of perception of cases of death in Turkish society. These results show Turkish society is especially sensitive to cases of death at young age and to the murdered. Further, a clear perception of the working of fate is encountered in deaths resulting from disaster and accidents; but the desire for vengeance is recorded in those laments concerning martyrs and the murdered. The statistical data show that most commonly cited reasons for death after road accidents, were a consequence of relationships with the opposite sex and from a sense of honor.

  10. Cod liver oil supplement consumption and health: cross-sectional results from the EPIC-Norfolk cohort study.

    PubMed

    Lentjes, Marleen A H; Welch, Ailsa A; Mulligan, Angela A; Luben, Robert N; Wareham, Nicholas J; Khaw, Kay-Tee

    2014-10-01

    Supplement users (SU) make healthy lifestyle choices; on the other hand, SU report more medical conditions. We hypothesised that cod liver oil (CLO) consumers are similar to non-supplement users, since CLO use might originate from historical motives, i.e., rickets prevention, and not health consciousness. CLO consumers were studied in order to identify possible confounders, such as confounding by indication. The European Prospective Investigation into Cancer (EPIC) investigates causes of chronic disease. The participants were 25,639 men and women, aged 40-79 years, recruited from general practices in Norfolk, East-Anglia (UK). Participants completed questionnaires and a health examination between 1993 and 1998. Supplement use was measured using 7-day diet diaries. CLO was the most common supplement used, more prevalent among women and associated with not smoking, higher physical activity level and more favourable eating habits. SU had a higher occurrence of benign growths and bone-related diseases, but CLO was negatively associated with cardiovascular-related conditions. Although the results of SU characteristics in EPIC-Norfolk are comparable with studies worldwide, the CLO group is different from SU in general. Confounding by indication takes place and will need to be taken into account when analysing prospective associations of CLO use with fracture risk and cardiovascular diseases.

  11. Epic Moon: a history of lunar exploration in the age of the telescope

    NASA Astrophysics Data System (ADS)

    Sheehan, William P.; Dobbins, Thomas A.

    timeless. The story of mankind's endless fascination with the world of the Moon and the gallery of interesting characters who pursued the details of the lunar surface with often strange intensity is a modern-day epic. Many of the stories recounted for the first time here will still be recounted generations hence, when the Apollo explorations may seem a mere interlude in what has actually been a more sustained and more significant era of endeavour. It is possible that the names of Schroeter, Beer and Mädler, Webb and Schmidt may prove to be as memorable as those of Armstrong, Aldrin, Cernan and Schmitt.

  12. EPIC Study of Two Enigmatic Sources: The Mouse and SNR 359.1-0.5

    NASA Technical Reports Server (NTRS)

    Pavlov, George

    2004-01-01

    The objective of the original proposal was to observe the Mouse pulsar wind nebula (associated with PSR J1744-2958) and the nearby supernova remnant G359.1-0.5, where the pulsar was probably born, with the XMM-Newton observatory to study the properties of these objects. SNR G359.1-0.5 was accepted as a Category C target and has not been observed. The Mouse was observed on April 27,2003 for 52 ks. The image analysis has shown that the Mouse is extended in the East-West direction, possibly along the direction of the pulsar's proper motion. The spectrum of this pulsar wind nebula can be described as an absorbed power law with the photon index GAMMA = 1.9 plus or minus 0.1, effective hydrogen column density n(sub H) = (2.6 plus or minus 0.1) x 10(exp 22) per square centimeter, and flux F = 1.8 x 10(exp -11) erg per square centimeter per second in the 1-10 keV energy range. Based on the n(sub H) value, the distance to the source is about 5 kpc, which results in the luminosity 3.7 x 10(exp 34) erg per second. We conclude that PSR J1744-2958 and the Mouse are not physically associated with G359.1-0.5, which lies at a larger distance. In addition to the Mouse, we also detected two Low-Mass X-ray Binaries, SLX 1744-299 and 1744-300, in the EPIC MOS and PN fields of view. The latter of these objects showed a Type I X-ray burst during our observation, with a rise time of 5 s and decay time of 60 s. A very strong pileup during the burst made the analysis of the burst properties unreliable. The spectral analysis of the persistent radiation from SLX 1744-299 and 1744-300 yields the hydrogen column densities of 3.2 plus or minus 0.1 and (3.6 plus or minus 0.2) x 10(exp 22) per square centimeter, respectively, which suggests that the sources are close to the Galactic center (d = 8-9 kpc). The spectra can be reasonably well fitted with a blackbody plus thin disk model, with the blackbody temperatures of 1.7 plus or minus 0.2 and 1.8 plus or minus 0.2 keV, respectively.

  13. Effect of introduction of a new electronic anesthesia record (Epic) system on the safety and efficiency of patient care in a gastrointestinal endoscopy suite-comparison with historical cohort

    PubMed Central

    Goudra, B; Singh, PM; Borle, A; Gouda, G

    2016-01-01

    Background: Use of electronic medical record systems has increased in the recent years. Epic is one such system gaining popularity in the USA. Epic is a private company, which invented the electronic documentation system adopted in our hospital. In spite of many presumed advantages, its use is not critically analyzed. Some of the perceived advantages are increased efficiency and protection against litigation as a result of accurate documentation. Materials and Methods: In this study, retrospective data of 305 patients who underwent endoscopic retrograde cholangiopancreatography (wherein electronic charting was used - “Epic group”) were compared with 288 patients who underwent the same procedure with documentation saved on a paper chart (“paper group”). Time of various events involved in the procedure such as anesthesia start, endoscope insertion, endoscope removal, and transfer to the postanesthesia care unit were routinely documented. From this data, the various time durations were calculated. Results: Both “anesthesia start to scope insertion” times and “scope removal to transfer” times were significantly less in the Epic group compared to the paper group. Use of Epic system led to a saving of 4 min of procedure time per patient. However, the mean oxygen saturation was significantly less in the Epic group. Conclusion: In spite of perceived advantages of Epic documentation system, significant hurdles remain with its use. Although the system allows seamless flow of patients, failure to remove all artifacts can lead to errors and become a source of potential litigation hazard. PMID:27051360

  14. The thin and medium filters of the EPIC camera on-board XMM-Newton: measured performance after more than 15 years of operation

    NASA Astrophysics Data System (ADS)

    Barbera, Marco; Gastaldello, Fabio; Sciortino, Luisa; Agnello, Simonpietro; Buscarino, Gianpiero; Collura, Alfonso; La Palombara, Nicola; Cicero, Ugo Lo; Sartore, Nicola; Tiengo, Andrea; Varisco, Salvatore; Venezia, Anna Maria

    2016-10-01

    After more than 15 years of operation of the EPIC camera on board the XMM-Newton X-ray observatory, we have reviewed the status of its Thin and Medium filters. We have selected a set of Thin and Medium back-up filters among those still available in the EPIC consortium and have started a program to investigate their status by different laboratory measurements including: UV/VIS transmission, Raman scattering, X-Ray Photoelectron Spectroscopy, and Atomic Force Microscopy. Furthermore, we have investigated the status of the EPIC flight filters by performing an analysis of the optical loading in the PN offset maps to gauge variations in the optical and UV transmission. We both investigated repeated observations of single optically bright targets and performed a statistical analysis of the extent of loading versus visual magnitude at different epochs. We report the results of the measurements conducted up to now. Most notably, we find no evidence for change in the UV/VIS transmission of the back-up filters in ground tests spanning a 2 year period and we find no evidence for change in the optical transmission of the thin filter of the EPIC-pn camera from 2002 to 2012. We point out some lessons learned for the development and calibration programs of filters for X-ray detectors in future Astronomy missions.

  15. The thin and medium filters of the EPIC camera on-board XMM-Newton: measured performance after more than 15 years of operation

    NASA Astrophysics Data System (ADS)

    Barbera, Marco; Gastaldello, Fabio; Sciortino, Luisa; Agnello, Simonpietro; Buscarino, Gianpiero; Collura, Alfonso; La Palombara, Nicola; Cicero, Ugo Lo; Sartore, Nicola; Tiengo, Andrea; Varisco, Salvatore; Venezia, Anna Maria

    2016-08-01

    After more than 15 years of operation of the EPIC camera on board the XMM-Newton X-ray observatory, we have reviewed the status of its Thin and Medium filters. We have selected a set of Thin and Medium back-up filters among those still available in the EPIC consortium and have started a program to investigate their status by different laboratory measurements including: UV/VIS transmission, Raman scattering, X-Ray Photoelectron Spectroscopy, and Atomic Force Microscopy. Furthermore, we have investigated the status of the EPIC flight filters by performing an analysis of the optical loading in the PN offset maps to gauge variations in the optical and UV transmission. We both investigated repeated observations of single optically bright targets and performed a statistical analysis of the extent of loading versus visual magnitude at different epochs. We report the results of the measurements conducted up to now. Most notably, we find no evidence for change in the UV/VIS transmission of the back-up filters in ground tests spanning a 2 year period and we find no evidence for change in the optical transmission of the thin filter of the EPIC-pn camera from 2002 to 2012. We point out some lessons learned for the development and calibration programs of filters for X-ray detectors in future Astronomy missions.

  16. Excerpts from "The Lewis and Clark Journals: An Epic of Discovery, the Abridgment of the Definitive Nebraska Edition": The Journey across the Plains

    ERIC Educational Resources Information Center

    Moulton, Gary E.

    2003-01-01

    This article contains excerpts from "The Lewis and Clark Journals: An Epic of Discovery, The Abridgment of the Definitive Nebraska Edition," published by the University of Nebraska Press in 2003. Editor Gary E. Moulton chose a few daily entries from the journals to highlight the expedition from May 14-October 12, 1804.

  17. PLTW and Epics-High: Curriculum Comparisons to Support Problem Solving in the Context of Engineering Design. Research in Engineering and Technology Education

    ERIC Educational Resources Information Center

    Kelley, Todd; Brenner, Daniel C.; Pieper, Jon T.

    2010-01-01

    A comparative study was conducted to compare two approaches to engineering design curriculum between different schools (inter-school) and between two curricular approaches, "Project Lead the Way" (PLTW) and "Engineering Projects in Community Service" (EPIC High) (inter-curricular). The researchers collected curriculum materials, including…

  18. I am Joaquin. Yo Soy Joaquin. An Epic Poem with a Chronology of People and Events in Mexican and Mexican American History.

    ERIC Educational Resources Information Center

    Gonzales, Rodolfo

    Both Spanish and English versions of the epic poem "I Am Joaquin" are given in this book. "I Am Joaquin" is the first work of poetry to be published by Chicanos for Chicanos. It is a historical essay of the greatness and weakness of the Chicano people. Their psychological wounds, cultural genocide, social castration, nobility, courage,…

  19. The K2 Ecliptic Plane Input Catalog (EPIC) and Stellar Classifications of 138,600 Targets in Campaigns 1-8

    NASA Astrophysics Data System (ADS)

    Huber, Daniel; Bryson, Stephen T.; Haas, Michael R.; Barclay, Thomas; Barentsen, Geert; Howell, Steve B.; Sharma, Sanjib; Stello, Dennis; Thompson, Susan E.

    2016-05-01

    The K2 Mission uses the Kepler spacecraft to obtain high-precision photometry over ≈80 day campaigns in the ecliptic plane. The Ecliptic Plane Input Catalog (EPIC) provides coordinates, photometry, and kinematics based on a federation of all-sky catalogs to support target selection and target management for the K2 mission. We describe the construction of the EPIC, as well as modifications and shortcomings of the catalog. Kepler magnitudes (Kp) are shown to be accurate to ≈0.1 mag for the Kepler field, and the EPIC is typically complete to Kp ≈ 17 (Kp ≈ 19 for campaigns covered by Sloan Digital Sky Survey). We furthermore classify 138,600 targets in Campaigns 1-8 (≈88% of the full target sample) using colors, proper motions, spectroscopy, parallaxes, and galactic population synthesis models, with typical uncertainties for G-type stars of ≈3% in {T}{{eff}}, ≈0.3 dex in {log} g, ≈40% in radius, ≈10% in mass, and ≈40% in distance. Our results show that stars targeted by K2 are dominated by K-M dwarfs (≈41% of all selected targets), F-G dwarfs (≈36%), and K giants (≈21%), consistent with key K2 science programs to search for transiting exoplanets and galactic archeology studies using oscillating red giants. However, we find significant variation of the fraction of cool dwarfs with galactic latitude, indicating a target selection bias due to interstellar reddening and increased contamination by giant stars near the galactic plane. We discuss possible systematic errors in the derived stellar properties, and differences with published classifications for K2 exoplanet host stars. The EPIC is hosted at the Mikulski Archive for Space Telescopes (MAST): http://archive.stsci.edu/k2/epic/search.php.

  20. Droughts, epic droughts and droughty centuries - lessons from a California paleoclimatic record: a PACLIM 2001 meeting report

    USGS Publications Warehouse

    Dettinger, M.D.

    2001-01-01

    During the early 1990s (but echoing studies by S.T. Harding at the University of California, from as early as the 1930s), several lines of paleoclimate evidence in and around the Sierra Nevada Range have provided the water community in California with some real horror stories. By studying ancient tree stumps submerged in Lake Tahoe and Tenaya Lake, stumps that were emerging from Mono Lake during its recent decline, and stumps that were exhumed in the Walker River bed during the floods of 1997, paleoclimatologists like Scott Stine of California State University, Hayward, assembled a picture of epic droughts in the central Sierra Nevada during the medieval period. These droughts had to be severe to drop water levels in the lakes and rivers low enough for the trees to grow in the first place, and then had to last for hundreds of years to explain tree-ring counts in these sizeable stumps. Worse yet, the evidence suggested at least two such epic droughts, one ending close to 1100 and the other close to 1350. These epic droughts challenged paleoclimatologists, as well as modern climatologists and hydrologists, to understand and, ultimately, to determine the likelihood that such droughts might recur in the foreseeable future. The first challenge, however, was to verify that such droughts were more than local events and as extreme as suggested. At this year’s Pacific Climate (PACLIM) Workshop, held March 18–21, 2001, at Asilomar (Pacific Grove, Calif.), special sessions brought together scientists to compare paleoclimatic reconstructions of ancient droughts and pluvial (wet) epidodes to try to determine the nature of decadal and centennial climate fluctuations in western North America, with emphasis on California. A companion session brought together modern climatologists to report on the latest explanations (and evidence) for decadal climate variations during the instrumental era of the 20th century. PACLIM is an annual workshop that, since 1983, has brought together

  1. A molecular epidemiology project on diet and cancer: the EPIC-Italy Prospective Study. Design and baseline characteristics of participants.

    PubMed

    Palli, Domenico; Berrino, Franco; Vineis, Paolo; Tumino, Rosario; Panico, Salvatore; Masala, Giovanna; Saieva, Calogero; Salvini, Simonetta; Ceroti, Marco; Pala, Valeria; Sieri, Sabina; Frasca, Graziella; Giurdanella, Maria Concetta; Sacerdote, Carlotta; Fiorini, Laura; Celentano, Egidio; Galasso, Rocco; Decarli, Adriano; Krogh, Vittorio

    2003-01-01

    EPIC-Italy is the Italian section of a larger project known as EPIC (European Prospective Investigation into Cancer and Nutrition), a prospective study on diet and cancer carried out in 10 European countries. In the period 1993-1998, EPIC-Italy completed the recruitment of 47,749 volunteers (15,171 men, 32,578 women, aged 35-65 years) in 4 different areas covered by cancer registries: Varese (12,083 volunteers) and Turin (10,604) in the Northern part of the country; Florence (13,597) and Ragusa (6,403) in Central and Southern Italy, respectively. An associate center in Naples enrolled 5,062 women. Detailed information for each individual volunteer about diet and life-style habits, anthropometric measurements and a blood sample was collected, after signing an informed consent form. A food frequency questionnaire specifically developed for the Italian dietary pattern was tested in a pilot phase. A computerized data base with the dietary and life-style information of each participant was completed. Blood samples were processed in the same day of collection, aliquoted (RBC, WBC, serum and plasma) and stored in liquid nitrogen containers. Follow-up procedures were validated and implemented for the identification of newly diagnosed cancer cases. Cancer incidence was related to dietary habits and biochemical markers of food consumption and individual susceptibility in order to test the role of diet-related exposure in the etiology of cancer and its interaction with other environmental or genetic determinants. The comparability of information in a prospective study design is much higher than in other studies. The availability of such a large biological bank linked to individual data on dietary and life-style exposures also provides the unique opportunity of evaluating the role of selected genotypes involved in the metabolism of chemical compounds and DNA repair, potentially related to the risk of cancer, in residents of geographic areas of Italy characterized by specific

  2. Diurnal Cycle of Convection in the East Pacific ITCZ during EPIC-2001

    NASA Technical Reports Server (NTRS)

    Boccippio, Dennis J.; Petersen, Walter A.; Cifelli, Robert; Rutledge, Steven A.; Arnold, James O. (Technical Monitor)

    2002-01-01

    During the last three weeks of September 2001, the EPIC-2001 intensive field campaign focused on studies of deep convection in the ITCZ over the Mexican warm pool region (10N, 95W) of the East Pacific. This study focuses on the pronounced observed diurnal cycle of environmental and convective parameters within the experiment domain. Data from three primary sources are examined: the R/V Ronald H. Brown C-band weather radar, 4-hourly soundings from the Brown and the Global Atmospherics, Inc. National Lightning Detection Network (long range product). Satellite data from TRMM, GOES and OV-1 are also used. The domain boundary layer shows a robust daily evolution of moist enthalpy (as reflect by equivalent potential temperature, theta-e, or wet bulb potential temperature, theta-w), with contributions from changes in both dry and moist entropy. Peak theta-w is found after local nightfall; the average diurnal range of theta-w is approximately 1 deg C. A composite diurnal cycle of convective properties was derived from the C-band volume scans, sampled continuously through the experiment at 10 minute updates. Products derived from the volumetric data include a surface PPI, 15 and 30 dBZ echo top height, vertically integrated liquid, and 6 km (mixed phase region) reflectivity CAPPIs. For almost all products, the parameter means showed virtually no diurnal cycle. However, for the upper-level products, the parameter spectra showed a clear peak in the occurrence of deep/vigorous convection (the "tail end of the distribution") between 7-9 UTC (1-3 AM local), while overall frequency of occurrence peaked later, from 12-15 UTC (6-9 AM local). This represents a daily "outbreak" of isolated deep cells a couple of hours after sunset and subsequent growth, organization and decay through the nighttime hours. The coherence of the diurnal cycle of the convective spectrum is impressive given the wide variety of convective organization observed during the experiment, and given the modulation

  3. Creating an EPICS Based Test Stand Development System for a BPM Digitizer of the Linac Coherent Light Source

    SciTech Connect

    Not Available

    2011-06-22

    The Linac Coherent Light Source (LCLS) is required to deliver a high quality electron beam for producing coherent X-rays. As a result, high resolution beam position monitoring is required. The Beam Position Monitor (BPM) digitizer acquires analog signals from the beam line and digitizes them to obtain beam position data. Although Matlab is currently being used to test the BPM digitizer?s functions and capability, the Controls Department at SLAC prefers to use Experimental Physics and Industrial Control Systems (EPICS). This paper discusses the transition of providing similar as well as enhanced functionalities, than those offered by Matlab, to test the digitizer. Altogether, the improved test stand development system can perform mathematical and statistical calculations with the waveform signals acquired from the digitizer and compute the fast Fourier transform (FFT) of the signals. Finally, logging of meaningful data into files has been added.

  4. Program Epicshow: A computer code to allow interactive viewing of the EPIC data libraries (version 94-1)

    SciTech Connect

    Cullen, D.E.

    1994-02-01

    This report discusses the following on the program EPICSHOW: The EPIC System Overview; The Epicshow code; Contents of the Data Bases; Implementing Epicshow; What is Epicshow?; Brief Instruction to the Menu Options; A Guided tour of Epicshow; Z+10, Z-10, etc.: Selecting a Target; Freeze!!!; Major, Minor, etc.: Selecting a Type of Data; Photon, Electron, etc.: Selecting a Projectile; Example Target and Projectile Output; Grids; 2 X 2; Zoom X and Show All; Points; Ratio; Lin/Log X and Y: Linear or Log Scaling; barn-1/cm:Microscopic or Macroscopic; Listing: Tabulated Output Listings; Pstscript: Postscript Output; Legend; Bigger and Smaller: Character Size; Bottoms Up and No Bottom; Interpolation of Data; Availability; Using your mouse; Size of Data Bases; Epicshow`s Standard Graphic Interface; and Postscript Output to Local Printer.

  5. A Comparative Study of Fuzzy Logic and Classical Control with EPICS[Experimental Physics and Industrial Control System

    SciTech Connect

    Johnny Tang; Hamid Shoaee

    1995-11-01

    The classical control theory which relies on the mathematical model of the underlying system has been successfully applied to the control of a large variety of simple, non-linear processes. However, it has not been as widely used with complicated, non-linear, time varying systems or with processes suffering from noisy measurements. The main idea of fuzzy control is to build a model of an expert operator who is capable of controlling the plant without thinking in terms of a mathematical model. This paper describes the application of fuzzy control to a feedback system within an EPICS environment. Comparison of the application of a modern controller and a fuzzy controller to an inverted pendulum problem is presented.

  6. Fruit and vegetable consumption and lung cancer risk: updated information from the European Prospective Investigation into Cancer and Nutrition (EPIC).

    PubMed

    Linseisen, Jakob; Rohrmann, Sabine; Miller, Anthony B; Bueno-de-Mesquita, H Bas; Büchner, Frederike L; Vineis, Paolo; Agudo, Antonio; Gram, Inger T; Janson, Lars; Krogh, Vittorio; Overvad, Kim; Rasmuson, Torgny; Schulz, Mandy; Pischon, Tobias; Kaaks, Rudolf; Nieters, Alexandra; Allen, Naomi E; Key, Timothy J; Bingham, Sheila; Khaw, Kay-Tee; Amiano, Pilar; Barricarte, Aurelio; Martinez, Carmen; Navarro, Carmen; Quirós, Ramón; Clavel-Chapelon, Françoise; Boutron-Ruault, Marie-Christine; Touvier, Mathilde; Peeters, Petra H M; Berglund, Göran; Hallmans, Göran; Lund, Eiliv; Palli, Domenico; Panico, Salvatore; Tumino, Rosario; Tjønneland, Anne; Olsen, Anja; Trichopoulou, Antonia; Trichopoulos, Dimitrios; Autier, Philippe; Boffetta, Paolo; Slimani, Nadia; Riboli, Elio

    2007-09-01

    The association of fruit and vegetable consumption and lung cancer incidence was evaluated using the most recent data from the European Prospective Investigation into Cancer and Nutrition (EPIC), applying a refined statistical approach (calibration) to account for measurement error potentially introduced by using food frequency questionnaire data. Between 1992 and 2000, detailed information on diet and life-style of 478,590 individuals participating in EPIC was collected. During a median follow-up of 6.4 years, 1,126 lung cancer cases were observed. Multivariate Cox proportional hazard models were applied for statistical evaluation. In the whole study population, fruit consumption was significantly inversely associated with lung cancer risk while no association was found for vegetable consumption. In current smokers, however, lung cancer risk significantly decreased with higher vegetable consumption; this association became more pronounced after calibration, the hazard ratio (HR) being 0.78 (95% CI 0.62-0.98) per 100 g increase in daily vegetable consumption. In comparison, the HR per 100 g fruit was 0.92 (0.85-0.99) in the entire cohort and 0.90 (0.81-0.99) in smokers. Exclusion of cases diagnosed during the first 2 years of follow-up strengthened these associations, the HR being 0.71 (0.55-0.94) for vegetables (smokers) and 0.86 (0.78-0.95) for fruit (entire cohort). Cancer incidence decreased with higher consumption of apples and pears (entire cohort) as well as root vegetables (smokers). In addition to an overall inverse association with fruit intake, the results of this evaluation add evidence for a significant inverse association of vegetable consumption and lung cancer incidence in smokers.

  7. Fluid intake and the risk of urothelial cell carcinomas in the European Prospective Investigation into Cancer and Nutrition (EPIC).

    PubMed

    Ros, Martine M; Bas Bueno-de-Mesquita, H B; Büchner, Frederike L; Aben, Katja K H; Kampman, Ellen; Egevad, Lars; Overvad, Kim; Tjønneland, Anne; Roswall, Nina; Clavel-Chapelon, Francoise; Kaaks, Rudolf; Chang-Claude, Jenny; Boeing, Heiner; Weikert, Steffen; Trichopoulou, Antonia; Orfanos, Philippos; Stasinopulou, Georgia; Saieva, Calogero; Krogh, Vittorio; Vineis, Paolo; Tumino, Rosario; Mattiello, Amalia; Peeters, Petra H M; van Duijnhoven, Fränzel J B; Lund, Eiliv; Gram, Inger T; Chirlaque, Maria D; Barricarte, Aurelio; Rodríguez, Laudina; Molina, Esther; Gonzalez, Carlos; Dorronsoro, Miren; Manjer, Jonas; Ehrnström, Roy; Ljungberg, Börje; Allen, Naomi E; Roddam, Andrew W; Khaw, Kay-Tee; Wareham, Nick; Boffetta, Paolo; Slimani, Nadia; Michaud, Dominique S; Kiemeney, Lambertus A L M; Riboli, Elio

    2011-06-01

    Results from previous studies investigating the association between fluid intake and urothelial cell carcinomas (UCC) are inconsistent. We evaluated this association among 233,236 subjects in the European Prospective Investigation into Cancer and Nutrition (EPIC), who had adequate baseline information on water and total fluid intake. During a mean follow-up of 9.3 years, 513 first primary UCC occurred. At recruitment, habitual fluid intake was assessed by a food frequency questionnaire. Multivariable hazard ratios were estimated using Cox regression stratified by age, sex and center and adjusted for energy intake, smoking status, duration of smoking and lifetime intensity of smoking. When using the lowest tertile of intake as reference, total fluid intake was not associated with risk of all UCC (HR 1.12; 95%CI 0.86-1.45, p-trend = 0.42) or with risk of prognostically high-risk UCC (HR 1.28; 95%CI 0.85-1.93, p-trend = 0.27) or prognostically low-risk UCC (HR 0.93; 95%CI 0.65-1.33, p-trend = 0.74). No associations were observed between risk of UCC and intake of water, coffee, tea and herbal tea and milk and other dairy beverages. For prognostically low-risk UCC suggestions of an inverse association with alcoholic beverages and of a positive association with soft drinks were seen. Increased risks were found for all UCC and prognostically low-risk UCC with higher intake of fruit and vegetable juices. In conclusion, total usual fluid intake is not associated with UCC risk in EPIC. The relationships observed for some fluids may be due to chance, but further investigation of the role of all types of fluid is warranted.

  8. epic3: national evidence-based guidelines for preventing healthcare-associated infections in NHS hospitals in England.

    PubMed

    Loveday, H P; Wilson, J A; Pratt, R J; Golsorkhi, M; Tingle, A; Bak, A; Browne, J; Prieto, J; Wilcox, M; UK Department of Health

    2014-01-01

    National evidence-based guidelines for preventing healthcare-associated infections (HCAI) in National Health Service (NHS) hospitals in England were originally commissioned by the Department of Health and developed during 1998-2000 by a nurse-led multi-professional team of researchers and specialist clinicians. Following extensive consultation, they were first published in January 2001(1) and updated in 2007.(2) A cardinal feature of evidence-based guidelines is that they are subject to timely review in order that new research evidence and technological advances can be identified, appraised and, if shown to be effective for the prevention of HCAI, incorporated into amended guidelines. Periodically updating the evidence base and guideline recommendations is essential in order to maintain their validity and authority. The Department of Health commissioned a review of new evidence and we have updated the evidence base for making infection prevention and control recommendations. A critical assessment of the updated evidence indicated that the epic2 guidelines published in 2007 remain robust, relevant and appropriate, but some guideline recommendations required adjustments to enhance clarity and a number of new recommendations were required. These have been clearly identified in the text. In addition, the synopses of evidence underpinning the guideline recommendations have been updated. These guidelines (epic3) provide comprehensive recommendations for preventing HCAI in hospital and other acute care settings based on the best currently available evidence. National evidence-based guidelines are broad principles of best practice that need to be integrated into local practice guidelines and audited to reduce variation in practice and maintain patient safety. Clinically effective infection prevention and control practice is an essential feature of patient protection. By incorporating these guidelines into routine daily clinical practice, patient safety can be enhanced and

  9. Psychosocial aetiology of chronic disease: a pragmatic approach to the assessment of lifetime affective morbidity in an EPIC component study

    PubMed Central

    Surtees, P; Wainwright, N; Brayne, C

    2000-01-01

    OBJECTIVES—The Health and Life Experiences Questionnaire (HLEQ) was developed for use in a prospective cohort study of 25 000 men and women living in Norfolk and forms a component study of the European Prospective Investigation into Cancer and Nutrition (EPIC). The HLEQ includes an assessment of mood status over the life course allowing a limited capacity for the imposition of diagnostic criteria to enable eventual evaluation of mental health status for chronic disease outcomes. This paper reports estimates of HLEQ Major Depressive Disorder (MDD) prevalence and compares them with those obtained through interviewer-based methods. In addition evidence for the impact of recall, clustering or cohort effects on these estimates are examined.
PARTICIPANTS—3491 eligible respondents to EPIC in Norfolk, aged 45-74 years, recruited from the first five general practices who completed the HLEQ.
MAIN RESULTS—MDD prevalence estimates were found to be closely comparable to those obtained recently (by interview) in the UK and to those lifetime MDD rates determined through international studies. Risk of MDD onset was found to vary with age as expected from earlier studies using interviewer-based assessments. Limited evidence was found to show that the distribution of first onset MDD episodes were compressed during the immediate pre-assessment period. Results were also consistent with previous evidence demonstrating the raised risk of MDD among women and of the decline in gender differences with advancing age.
CONCLUSIONS—These results suggest that estimates of putative MDD diagnostic status, derived through the HLEQ, and of associated demographic risk are similar to those derived by more intensive and costly assessment methods. Implications for the future study of MDD both as an outcome and as a risk factor for chronic disease are discussed.


Keywords: depression; epidemiology; prevalence PMID:10715744

  10. Spatial Analysis of Weather-induced Annual and Decadal Average Yield Variability as Modeled by EPIC for Rain-fed Wheat in Europe

    NASA Astrophysics Data System (ADS)

    Khabarov, Nikolay; Balkovic, Juraj; Schmid, Erwin; Schwartz, Alexander; Obersteiner, Michael; Azevedo, Ligia B.

    2016-04-01

    In our analysis we evaluate the accuracy of near-term (decadal) average crop yield assessments as supported by the biophysical crop growth model EPIC. A spatial assessment of averages and variability has clear practical implications for agricultural producers and investors concerned with an estimation of the basic stochastic characteristics of a crop yield distribution. As a reliable weather projection for a time period of several years will apparently remain a challenge in the near future, we have employed the existing gridded datasets on historical weather as a best proxy for the current climate. Based on different weather inputs to EPIC, we analyzed the model runs for the rain-fed wheat for 1968-2007 employing AgGRID/GGCMI simulations using harmonized inputs and assumptions (weather datasets: GRASP and Princeton). We have explored the variability of historical ten-year yield averages in the past forty years as modeled by the EPIC model, and found that generally the ten-year average yield variability is less than 20% ((max-min)/average), whereas there are mid/low yielding areas with a higher ten-years average variability of 20-50%. The location of these spots of high variability differs between distinctive model-weather setups. Assuming that historical weather can be used as a proxy of the weather in the next ten years, a best possible EPIC-based assessment of a ten-year average yield is a range of 20% width ((max-min)/average). For some mid/low productive areas the range is up to 50% wide.

  11. Associations of anthropometric markers with serum metabolites using a targeted metabolomics approach: results of the EPIC-potsdam study

    PubMed Central

    Bachlechner, U; Floegel, A; Steffen, A; Prehn, C; Adamski, J; Pischon, T; Boeing, H

    2016-01-01

    Background/Objectives: The metabolic consequences of type of body shape need further exploration. Whereas accumulation of body mass in the abdominal area is a well-established metabolic risk factor, accumulation in the gluteofemoral area is controversially debated. We evaluated the associations of anthropometric markers of overall body mass and body shape with 127 serum metabolites within a sub-sample of the European Prospective Investigation into Cancer and Nutrition (EPIC)-Potsdam cohort. Subjects/Methods: The cross-sectional analysis was conducted in 2270 participants, randomly drawn from the EPIC-Potsdam cohort. Metabolites were measured by targeted metabolomics. To select metabolites related with both waist circumference (WC) (abdominal subcutaneous and visceral fat) and hip circumference (HC) (gluteofemoral fat, muscles and bone structure) correlations (r) with body mass index (BMI) as aggregating marker of body mass (lean and fat mass) were calculated. Relations with body shape were assessed by median metabolite concentrations across tertiles of WC and HC, mutually adjusted to each other. Results: Correlations revealed 23 metabolites related to BMI (r⩾I0.20 I). Metabolites showing relations with BMI were showing similar relations with HC adjusted WC (WCHC). In contrast, relations with WC adjusted HC (HCWC) were less concordant with relations of BMI and WCHC. In both sexes, metabolites with concordant relations regarding WCHC and HCWC included tyrosine, diacyl-phosphatidylcholine C38:3, C38:4, lyso-phosphatidylcholine C18:1, C18:2 and sphingomyelin C18:1; metabolites with opposite relations included isoleucine, diacyl-phosphatidylcholine C42:0, acyl–alkyl-phosphatidylcholine C34:3, C42:4, C42:5, C44:4 and C44:6. Metabolites specifically related to HCWC included acyl–alkyl-phosphatidylcholine C34:2, C36:2, C38:2 and C40:4, and were solely observed in men. Other metabolites were related to WCHC only. Conclusions: The study revealed specific metabolic

  12. Urinary excretions of 34 dietary polyphenols and their associations with lifestyle factors in the EPIC cohort study

    PubMed Central

    Zamora-Ros, Raul; Achaintre, David; Rothwell, Joseph A.; Rinaldi, Sabina; Assi, Nada; Ferrari, Pietro; Leitzmann, Michael; Boutron-Ruault, Marie-Christine; Fagherazzi, Guy; Auffret, Aurélie; Kühn, Tilman; Katzke, Verena; Boeing, Heiner; Trichopoulou, Antonia; Naska, Androniki; Vasilopoulou, Effie; Palli, Domenico; Grioni, Sara; Mattiello, Amalia; Tumino, Rosario; Ricceri, Fulvio; Slimani, Nadia; Romieu, Isabelle; Scalbert, Augustin

    2016-01-01

    Urinary excretion of 34 dietary polyphenols and their variations according to diet and other lifestyle factors were measured by tandem mass spectrometry in 475 adult participants from the European Prospective Investigation into Cancer and Nutrition (EPIC) cross-sectional study. A single 24-hour urine sample was analysed for each subject from 4 European countries. The highest median levels were observed for phenolic acids such as 4-hydroxyphenylacetic acid (157 μmol/24 h), followed by 3-hydroxyphenylacetic, ferulic, vanillic and homovanillic acids (20–50 μmol/24 h). The lowest concentrations were observed for equol, apigenin and resveratrol (<0.1 μmol/24 h). Urinary polyphenols significantly varied by centre, followed by alcohol intake, sex, educational level, and energy intake. This variability is largely explained by geographical variations in the diet, as suggested by the high correlations (r > 0.5) observed between urinary polyphenols and the intake of their main food sources (e.g., resveratrol and gallic acid ethyl ester with red wine intake; caffeic, protocatechuic and ferulic acids with coffee consumption; and hesperetin and naringenin with citrus fruit intake). The large variations in urinary polyphenols observed are largely determined by food preferences. These polyphenol biomarkers should allow more accurate evaluation of the relationships between polyphenol exposure and the risk of chronic diseases in large epidemiological studies. PMID:27273479

  13. Water, from Gilgamesh Epic to Nobel Laureate Richard Feynman: a look into polywater and the memory of water.

    PubMed

    De Santo, Luca Salvatore; Bisaccia, Carmela; De Santo, Rosa Maria

    2009-01-01

    Water is a complex source of imagination, dreams and rituals, where cultural differences ebb and flow, where a plethora of meanings and interpretations interlink and wash over one another. Water has an ambivalent character as stated in most of the ancient cosmogonies and in the Epic of Gilgamesh. Water's composition was discovered by the London scientist Henry Cavendish in about 1781. Although it is an apparently simple molecule (H2O), it has a highly complex and anomalous character. The anomalous properties of water are those where the behavior of liquid water is quite different from what is found with other liquids. As often stated, life depends indeed on these anomalous properties of water. Notably there are 12 phase, 22 density, 12 material, 11 thermodynamic and 9 physical anomalies. A powerful look into the water molecule was given by Nobel Prize recipient Richard P. Feynman as published in Six easy pieces. A look into the most recent quest for more knowledge about water leads us to the concept of pathological science. The cases of "polywater" and "the memory of water" are indeed paradigmatic episodes of fraudulent research published in journals with high impact factors. In conclusion, men came out of water engineered to handle water, and water greatly affects mythology and philosophy and is a strong presence in the arts and science. PMID:20013738

  14. Urinary excretions of 34 dietary polyphenols and their associations with lifestyle factors in the EPIC cohort study.

    PubMed

    Zamora-Ros, Raul; Achaintre, David; Rothwell, Joseph A; Rinaldi, Sabina; Assi, Nada; Ferrari, Pietro; Leitzmann, Michael; Boutron-Ruault, Marie-Christine; Fagherazzi, Guy; Auffret, Aurélie; Kühn, Tilman; Katzke, Verena; Boeing, Heiner; Trichopoulou, Antonia; Naska, Androniki; Vasilopoulou, Effie; Palli, Domenico; Grioni, Sara; Mattiello, Amalia; Tumino, Rosario; Ricceri, Fulvio; Slimani, Nadia; Romieu, Isabelle; Scalbert, Augustin

    2016-01-01

    Urinary excretion of 34 dietary polyphenols and their variations according to diet and other lifestyle factors were measured by tandem mass spectrometry in 475 adult participants from the European Prospective Investigation into Cancer and Nutrition (EPIC) cross-sectional study. A single 24-hour urine sample was analysed for each subject from 4 European countries. The highest median levels were observed for phenolic acids such as 4-hydroxyphenylacetic acid (157 μmol/24 h), followed by 3-hydroxyphenylacetic, ferulic, vanillic and homovanillic acids (20-50 μmol/24 h). The lowest concentrations were observed for equol, apigenin and resveratrol (<0.1 μmol/24 h). Urinary polyphenols significantly varied by centre, followed by alcohol intake, sex, educational level, and energy intake. This variability is largely explained by geographical variations in the diet, as suggested by the high correlations (r > 0.5) observed between urinary polyphenols and the intake of their main food sources (e.g., resveratrol and gallic acid ethyl ester with red wine intake; caffeic, protocatechuic and ferulic acids with coffee consumption; and hesperetin and naringenin with citrus fruit intake). The large variations in urinary polyphenols observed are largely determined by food preferences. These polyphenol biomarkers should allow more accurate evaluation of the relationships between polyphenol exposure and the risk of chronic diseases in large epidemiological studies. PMID:27273479

  15. Water, from Gilgamesh Epic to Nobel Laureate Richard Feynman: a look into polywater and the memory of water.

    PubMed

    De Santo, Luca Salvatore; Bisaccia, Carmela; De Santo, Rosa Maria

    2009-01-01

    Water is a complex source of imagination, dreams and rituals, where cultural differences ebb and flow, where a plethora of meanings and interpretations interlink and wash over one another. Water has an ambivalent character as stated in most of the ancient cosmogonies and in the Epic of Gilgamesh. Water's composition was discovered by the London scientist Henry Cavendish in about 1781. Although it is an apparently simple molecule (H2O), it has a highly complex and anomalous character. The anomalous properties of water are those where the behavior of liquid water is quite different from what is found with other liquids. As often stated, life depends indeed on these anomalous properties of water. Notably there are 12 phase, 22 density, 12 material, 11 thermodynamic and 9 physical anomalies. A powerful look into the water molecule was given by Nobel Prize recipient Richard P. Feynman as published in Six easy pieces. A look into the most recent quest for more knowledge about water leads us to the concept of pathological science. The cases of "polywater" and "the memory of water" are indeed paradigmatic episodes of fraudulent research published in journals with high impact factors. In conclusion, men came out of water engineered to handle water, and water greatly affects mythology and philosophy and is a strong presence in the arts and science.

  16. Explosion-induced stress changes estimated from vibrating-wire stressmeter measurements near the Mighty Epic event, Nevada Test Site

    USGS Publications Warehouse

    Ellis, William L.; Kibler, J.D.

    1983-01-01

    Explosion-induced compressive stress increases near an underground nuclear explosion are believed to contribute significantly to the containment of high-pressure gases within the explosion-produced cavity. These induced compressive stresses are predicted by computer calculations, but have never been adequately confirmed by field measurements, owing primarily to the unique difficulties of obtaining such field data. Vibrating-wire stressmeter measurements made near the Mighty Epic nuclear detonation, however, qualitatively indicate that within 150 meters of the working point, permanent compressive stress increases of several megapascals were present 15 weeks after the event. Additionally, stress-change magnitudes interpreted from the stressmeter data between the 75- and 260-meter range from the working point compare favorably with calculational predictions of the stress changes believed to be present shortly after detonation of the event. The measurements and calculations differ, however, with regard to the pattern of stress change radial and transverse to the explosion source. For the range of the field measurements from the working point, computer models predict the largest compressive-stress increase to be radial to the explosion source, while the field data indicate the transverse component of. stress change to be the most compressive. The significance of time-dependent modification of the initial explosion-induced stress distribution is, however, uncertain with regard to the comparison of the field measurements and theoretical predictions.

  17. JBluIce-EPICS: a fast and flexible open-source beamline control system for macromolecular crystallography

    NASA Astrophysics Data System (ADS)

    Stepanov, S.; Hilgart, M.; Makarov, O.; Pothineni, S. B.; Yoder, D.; Ogata, C.; Sanishvili, R.; Venugopalan, N.; Becker, M.; Clift, M.; Smith, J. L.; Fischetti, R. F.

    2013-03-01

    This paper overviews recent advances in the JBluIce-EPICS open-source control system designed at the macromolecular crystallography beamlines of the National Institute of General Medical Sciences and National Cancer Institute at the Advanced Photon Source (GM/CA@APS). We discuss some technical highlights of this system distinguishing it from the competition, such as reduction of software layers to only two, possibility to operate JBluIce in parallel with other beamline controls, plugin-enabled architecture where the plugins can be written in any programming language, and utilization of the whole power of the Java integrated development environment in the Graphical User Interface. Then, we demonstrate how these highlights help to make JBluIce fast, easily adaptable to new beamline developments, and intuitive for users. In particular, we discuss several recent additions to the system including a bridge between crystal rastering and data collection, automatic detection of raster polygons from optical crystal centering, background data processing, and a pathway to a fully automated pipeline from crystal screening to solving crystal structure.

  18. Extrasolar Planet Inferometric Survey (EPIcS)

    NASA Technical Reports Server (NTRS)

    Shao, Michael; Baliunas, Sallie; Boden, Andrew; Kulkarni, Shrinivas; Lin, Douglas N. C.; Loredo, Tom; Queloz, Didier; Shaklan, Stuart; Tremaine, Scott; Wolszczan, Alexander

    2004-01-01

    The discovery of the nature of the solar system was a crowning achievement of Renaissance science. The quest to evaluate the properties of extrasolar planetary systems is central to both the intellectual understanding of our origins and the cultural understanding of humanity's place in the Universe; thus it is appropriate that the goals and objectives of NASA's breakthrough Origins program emphasize the study of planetary systems, with a focus on the search for habitable planets. We propose an ambitious research program that will use SIM - the first major mission of the Origins program - to explore planetary systems in our Galactic neighborhood. Our program is a novel two-tiered SIM survey of nearby stars that exploits the capabilities of SIM to achieve two scientific objectives: (i) to identify Earth-like planets in habitable regions around nearby Sunlike stars: and (ii) to explore the nature and evolution of planetary systems in their full variety. The first of these objectives was recently recommended by the Astronomy and Astrophysics Survey Committee (the McKee-Taylor Committee) as a prerequisite for the development of the Terrestrial Planet Finder mission later in the decade. Our program combines this two-part survey with preparatory and contemporaneous research designed to maximize the scientific return from the limited and thus precious observing resources of SIM.

  19. Primers for low-copy nuclear genes in the Melastomataceae1

    PubMed Central

    Reginato, Marcelo; Michelangeli, Fabián A.

    2016-01-01

    Premise of the study: Low-copy nuclear gene primers were developed for phylogenetic studies across the Melastomataceae. Methods and Results: Total genomic libraries from eight species in the Melastomataceae along with one transcriptome were used for marker identification and primer design. Eight exon-primed intron-crossing markers were amplified with success in taxa of nine tribes in the Melastomataceae. The new markers were directly sequenced for eight samples of closely related species of Miconia (Chaenanthera clade) in the tribe Miconieae. The DNA sequences for the eight loci ranged from 660 to 818 aligned base pairs. Compared with four commonly used markers in other studies, the loci developed here had a higher number of variable sites than plastid spacers (7–16 vs. 26–45) and comparable variation to the ribosomal spacers (28–39). Conclusions: The novel primer pairs should be useful for a broad range of studies of systematics and evolution in the diverse Melastomataceae. PMID:26819862

  20. Efficient Photometry In-Frame Calibration (EPIC) Gaussian Corrections for Automated Background Normalization of Rate-Tracked Satellite Imagery

    NASA Astrophysics Data System (ADS)

    Griesbach, J.; Wetterer, C.; Sydney, P.; Gerber, J.

    Photometric processing of non-resolved Electro-Optical (EO) images has commonly required the use of dark and flat calibration frames that are obtained to correct for charge coupled device (CCD) dark (thermal) noise and CCD quantum efficiency/optical path vignetting effects respectively. It is necessary to account/calibrate for these effects so that the brightness of objects of interest (e.g. stars or resident space objects (RSOs)) may be measured in a consistent manner across the CCD field of view. Detected objects typically require further calibration using aperture photometry to compensate for sky background (shot noise). For this, annuluses are measured around each detected object whose contained pixels are used to estimate an average background level that is subtracted from the detected pixel measurements. In a new photometric calibration software tool developed for AFRL/RD, called Efficient Photometry In-Frame Calibration (EPIC), an automated background normalization technique is proposed that eliminates the requirement to capture dark and flat calibration images. The proposed technique simultaneously corrects for dark noise, shot noise, and CCD quantum efficiency/optical path vignetting effects. With this, a constant detection threshold may be applied for constant false alarm rate (CFAR) object detection without the need for aperture photometry corrections. The detected pixels may be simply summed (without further correction) for an accurate instrumental magnitude estimate. The noise distribution associated with each pixel is assumed to be sampled from a Poisson distribution. Since Poisson distributed data closely resembles Gaussian data for parameterized means greater than 10, the data may be corrected by applying bias subtraction and standard-deviation division. EPIC performs automated background normalization on rate-tracked satellite images using the following technique. A deck of approximately 50-100 images is combined by performing an independent median

  1. Investigation of dietary factors and endometrial cancer risk using a nutrient-wide association study approach in the EPIC and Nurses’ Health Study (NHS) and NHSII

    PubMed Central

    Merritt, Melissa A.; Tzoulaki, Ioanna; Tworoger, Shelley S.; De Vivo, Immaculata; Hankinson, Susan E.; Fernandes, Judy; Tsilidis, Konstantinos K.; Weiderpass, Elisabete; Tjønneland, Anne; Petersen, Kristina E.N.; Dahm, Christina C.; Overvad, Kim; Dossus, Laure; Boutron-Ruault, Marie-Christine; Fagherazzi, Guy; Fortner, Renée T.; Kaaks, Rudolf; Aleksandrova, Krasimira; Boeing, Heiner; Trichopoulou, Antonia; Bamia, Christina; Trichopoulos, Dimitrios; Palli, Domenico; Grioni, Sara; Tumino, Rosario; Sacerdote, Carlotta; Mattiello, Amalia; Bueno-de-Mesquita, H.B(as).; Onland-Moret, N.C. (Charlotte); Peeters, Petra H.; Gram, Inger T.; Skeie, Guri; Quirós, J. Ramón; Duell, Eric J.; Sánchez, María-José; Salmerón, D.; Barricarte, Aurelio; Chamosa, Saioa; Ericson, Ulrica; Sonestedt, Emily; Nilsson, Lena Maria; Idahl, Annika; Khaw, Kay-Tee; Wareham, Nicholas; Travis, Ruth C.; Rinaldi, Sabina; Romieu, Isabelle; Patel, Chirag J.; Riboli, Elio; Gunter, Marc J.

    2014-01-01

    Data on the role of dietary factors in endometrial cancer development are limited and inconsistent. We applied a ‘nutrient-wide association study’ approach to systematically evaluate dietary risk associations for endometrial cancer while controlling for multiple hypothesis tests using the false discovery rate (FDR) and validating the results in an independent cohort. We evaluated endometrial cancer risk associations for dietary intake of 84 foods and nutrients based on dietary questionnaires in three prospective studies, the European Prospective Investigation into Cancer and Nutrition (EPIC; N=1,303 cases) followed by validation of nine foods/nutrients (FDR≤0.10) in the Nurses’ Health Studies (NHS/NHSII; N=1,531 cases). Cox regression models were used to estimate hazard ratios (HRs) and 95% confidence intervals (CIs). In multivariate adjusted comparisons of the extreme categories of intake at baseline, coffee was inversely associated with endometrial cancer risk (EPIC, median intake 750 g/day vs 8.6, HR, 0.81; 95% CI, 0.68-0.97, Ptrend=0.09; NHS/NHSII, median intake 1067 g/day vs none, HR, 0.82; 95% CI, 0.70-0.96, Ptrend=0.04). Eight other dietary factors that were associated with endometrial cancer risk in the EPIC study (total fat, monounsaturated fat, carbohydrates, phosphorus, butter, yogurt, cheese and potatoes) were not confirmed in the NHS/NHSII. Our findings suggest that coffee intake may be inversely associated with endometrial cancer risk. Further data are needed to confirm these findings and to examine the mechanisms linking coffee intake to endometrial cancer risk in order to develop improved prevention strategies. PMID:25662427

  2. Investigation of dietary factors and endometrial cancer risk using a nutrient-wide association study approach in the EPIC and Nurses' Health Study (NHS) and NHSII.

    PubMed

    Merritt, Melissa A; Tzoulaki, Ioanna; Tworoger, Shelley S; De Vivo, Immaculata; Hankinson, Susan E; Fernandes, Judy; Tsilidis, Konstantinos K; Weiderpass, Elisabete; Tjønneland, Anne; Petersen, Kristina E N; Dahm, Christina C; Overvad, Kim; Dossus, Laure; Boutron-Ruault, Marie-Christine; Fagherazzi, Guy; Fortner, Renée T; Kaaks, Rudolf; Aleksandrova, Krasimira; Boeing, Heiner; Trichopoulou, Antonia; Bamia, Christina; Trichopoulos, Dimitrios; Palli, Domenico; Grioni, Sara; Tumino, Rosario; Sacerdote, Carlotta; Mattiello, Amalia; Bueno-de-Mesquita, H Bas; Onland-Moret, N Charlotte; Peeters, Petra H; Gram, Inger T; Skeie, Guri; Quirós, J Ramón; Duell, Eric J; Sánchez, María-José; Salmerón, D; Barricarte, Aurelio; Chamosa, Saioa; Ericson, Ulrica; Sonestedt, Emily; Nilsson, Lena Maria; Idahl, Annika; Khaw, Kay-Tee; Wareham, Nicholas; Travis, Ruth C; Rinaldi, Sabina; Romieu, Isabelle; Patel, Chirag J; Riboli, Elio; Gunter, Marc J

    2015-02-01

    Data on the role of dietary factors in endometrial cancer development are limited and inconsistent. We applied a "nutrient-wide association study" approach to systematically evaluate dietary risk associations for endometrial cancer while controlling for multiple hypothesis tests using the false discovery rate (FDR) and validating the results in an independent cohort. We evaluated endometrial cancer risk associations for dietary intake of 84 foods and nutrients based on dietary questionnaires in three prospective studies, the European Prospective Investigation into Cancer and Nutrition (EPIC; N = 1,303 cases) followed by validation of nine foods/nutrients (FDR ≤ 0.10) in the Nurses' Health Studies (NHS/NHSII; N = 1,531 cases). Cox regression models were used to estimate HRs and 95% confidence intervals (CI). In multivariate adjusted comparisons of the extreme categories of intake at baseline, coffee was inversely associated with endometrial cancer risk (EPIC, median intake 750 g/day vs. 8.6; HR, 0.81; 95% CI, 0.68-0.97, Ptrend = 0.09; NHS/NHSII, median intake 1067 g/day vs. none; HR, 0.82; 95% CI, 0.70-0.96, Ptrend = 0.04). Eight other dietary factors that were associated with endometrial cancer risk in the EPIC study (total fat, monounsaturated fat, carbohydrates, phosphorus, butter, yogurt, cheese, and potatoes) were not confirmed in the NHS/NHSII. Our findings suggest that coffee intake may be inversely associated with endometrial cancer risk. Further data are needed to confirm these findings and to examine the mechanisms linking coffee intake to endometrial cancer risk to develop improved prevention strategies. PMID:25662427

  3. Determinants of non- response to a second assessment of lifestyle factors and body weight in the EPIC-PANACEA study

    PubMed Central

    2012-01-01

    Background This paper discusses whether baseline demographic, socio-economic, health variables, length of follow-up and method of contacting the participants predict non-response to the invitation for a second assessment of lifestyle factors and body weight in the European multi-center EPIC-PANACEA study. Methods Over 500.000 participants from several centers in ten European countries recruited between 1992 and 2000 were contacted 2–11 years later to update data on lifestyle and body weight. Length of follow-up as well as the method of approaching differed between the collaborating study centers. Non-responders were compared with responders using multivariate logistic regression analyses. Results Overall response for the second assessment was high (81.6%). Compared to postal surveys, centers where the participants completed the questionnaire by phone attained a higher response. Response was also high in centers with a short follow-up period. Non-response was higher in participants who were male (odds ratio 1.09 (confidence interval 1.07; 1.11), aged under 40 years (1.96 (1.90; 2.02), living alone (1.40 (1.37; 1.43), less educated (1.35 (1.12; 1.19), of poorer health (1.33 (1.27; 1.39), reporting an unhealthy lifestyle and who had either a low (<18.5 kg/m2, 1.16 (1.09; 1.23)) or a high BMI (>25, 1.08 (1.06; 1.10); especially ≥30 kg/m2, 1.26 (1.23; 1.29)). Conclusions Cohort studies may enhance cohort maintenance by paying particular attention to the subgroups that are most unlikely to respond and by an active recruitment strategy using telephone interviews. PMID:23006680

  4. Macronutrient Composition of the Diet and Prospective Weight Change in Participants of the EPIC-PANACEA Study

    PubMed Central

    Vergnaud, Anne-Claire; Norat, Teresa; Mouw, Traci; Romaguera, Dora; May, Anne M.; Bueno-de-Mesquita, H. Bas; van der A, Daphne; Agudo, Antonio; Wareham, Nicholas; Khaw, Kay-Tee; Romieu, Isabelle; Freisling, Heinz; Slimani, Nadia; Perquier, Florence; Boutron-Ruault, Marie-Christine; Clavel-Chapelon, Françoise; Palli, Domenico; Berrino, Franco; Mattiello, Amalia; Tumino, Rosario; Ricceri, Fulvio; Rodríguez, Laudina; Molina-Montes, Esther; Amiano, Pilar; Barricarte, Aurelio; Chirlaque, Maria-Dolores; Crowe, Francesca L.; Orfanos, Philippos; Naska, Androniki; Trichopoulou, Antonia; Teucher, Birgit; Kaaks, Rudolf; Boeing, Heiner; Buijsse, Brian; Johansson, Ingeged; Hallmans, Göran; Drake, Isabel; Sonestedt, Emily; Jakobsen, Marianne Uhre; Overvad, Kim; Tjønneland, Anne; Halkjær, Jytte; Skeie, Guri; Braaten, Tonje; Lund, Eiliv; Riboli, Elio; Peeters, Petra H. M.

    2013-01-01

    Background The effect of the macronutrient composition of the usual diet on long term weight maintenance remains controversial. Methods 373,803 subjects aged 25–70 years were recruited in 10 European countries (1992–2000) in the PANACEA project of the EPIC cohort. Diet was assessed at baseline using country-specific validated questionnaires and weight and height were measured at baseline and self-reported at follow-up in most centers. The association between weight change after 5 years of follow-up and the iso-energetic replacement of 5% of energy from one macronutrient by 5% of energy from another macronutrient was assessed using multivariate linear mixed-models. The risk of becoming overweight or obese after 5 years was investigated using multivariate Poisson regressions stratified according to initial Body Mass Index. Results A higher proportion of energy from fat at the expense of carbohydrates was not significantly associated with weight change after 5 years. However, a higher proportion of energy from protein at the expense of fat was positively associated with weight gain. A higher proportion of energy from protein at the expense of carbohydrates was also positively associated with weight gain, especially when carbohydrates were rich in fibre. The association between percentage of energy from protein and weight change was slightly stronger in overweight participants, former smokers, participants ≥60 years old, participants underreporting their energy intake and participants with a prudent dietary pattern. Compared to diets with no more than 14% of energy from protein, diets with more than 22% of energy from protein were associated with a 23–24% higher risk of becoming overweight or obese in normal weight and overweight subjects at baseline. Conclusion Our results show that participants consuming an amount of protein above the protein intake recommended by the American Diabetes Association may experience a higher risk of becoming overweight or obese

  5. Dietary glycemic load and risk of cognitive impairment in women: findings from the EPIC-Naples cohort.

    PubMed

    Simeon, Vittorio; Chiodini, Paolo; Mattiello, Amalia; Sieri, Sabina; Panico, Camilla; Brighenti, Furio; Krogh, Vittorio; Panico, Salvatore

    2015-05-01

    Cognitive impairment is a common cause of morbidity in the elderly. The relationship between dietary habits and cognitive impairment in a female population living in the metropolitan area of Naples, in the Mediterranean part of Italy, has been evaluated in the Naples EPIC prospective cohort study. The study cohort, enrolled between 1993 and 1997, is composed of 5062 women aged 30-69 years. At time of enrolment anthropometric measures were performed and information about socio-demographic details, clinical data, lifestyle and dietary habits were collected. During 2008 and 2009, women 65 years of age or older received a telephone interview to evaluate cognitive status (TICS); the derived score was used as proxy of cognitive impairment. Analyses were carried out on 1514 participants. Linear regression model showed negative association between TICS score and, respectively, age at baseline (β = -.31, 95% CI -.34, -.24), body mass index (BMI) (β = -.08, 95% CI -.16, -.01), and glycemic load (GL) (β = -.02, 95% CI -.03, -.01), whereas education level (β = 0.62, 95% CI .56, .69) showed positive association. A logistic regression model, used to evaluate determinants of the low cognitive score (TICS score ≤ 15, 1st tertile), confirmed association for previous variables [age (OR 1.1, 95% CI 1.08, 1.15); BMI (OR 1.03, 95% CI 1.001, 1.07); GL (OR 1.005, 95% CI 1.001, 1.011); education level (OR .82, 95% CI .79, .84)] with, in addition, type II diabetes (OR 1.85, 95% CI 1.014, 3.4). This study indicates that GL may play a role in determining risk of cognitive impairment, besides age, BMI, education and diabetes.

  6. Potential Predictors of Plasma Fibroblast Growth Factor 23 Concentrations: Cross-Sectional Analysis in the EPIC-Germany Study

    PubMed Central

    di Giuseppe, Romina; Kühn, Tilman; Hirche, Frank; Buijsse, Brian; Dierkes, Jutta; Fritsche, Andreas; Kaaks, Rudolf; Boeing, Heiner; Stangl, Gabriele I.; Weikert, Cornelia

    2015-01-01

    Background Increased fibroblast growth factor 23 (FGF23), a bone-derived hormone involved in the regulation of phosphate and vitamin D metabolism, has been related to the development of cardiovascular disease (CVD) in chronic kidney disease patients and in the general population. However, what determines higher FGF23 levels is still unclear. Also, little is known about the influence of diet on FGF23. The aim of this study was therefore to identify demographic, clinical and dietary correlates of high FGF23 concentrations in the general population. Methods We performed a cross-sectional analysis within a randomly selected subcohort of the European Prospective Investigation into Cancer and Nutrition (EPIC)-Germany comprising 2134 middle-aged men and women. The Human FGF23 (C-Terminal) ELISA kit was used to measure FGF23 in citrate plasma. Dietary data were obtained at baseline via validated food frequency questionnaires including up to 148 food items. Results Multivariable adjusted logistic regression showed that men had a 66% lower and smokers a 64% higher probability of having higher FGF23 (≥ 90 RU/mL) levels compared, respectively, with women and nonsmokers. Each doubling in parathyroid hormone, creatinine, and C-reactive protein was related to higher FGF23. Among the dietary factors, each doubling in calcium and total energy intake was related, respectively, to a 1.75 and to a 4.41 fold increased probability of having higher FGF23. Finally, each doubling in the intake of iron was related to an 82% lower probability of having higher FGF23 levels. Results did not substantially change after exclusion of participants with lower kidney function. Conclusions In middle-aged men and women traditional and non-traditional CVD risk factors were related to higher FGF23 concentrations. These findings may contribute to the understanding of the potential mechanisms linking increased FGF23 to increased CVD risk. PMID:26193703

  7. Degree of urbanization and mammographic density in Dutch breast cancer screening participants: results from the EPIC-NL cohort.

    PubMed

    Emaus, Marleen J; Bakker, Marije F; Beelen, Rob M J; Veldhuis, Wouter B; Peeters, Petra H M; van Gils, Carla H

    2014-12-01

    It has been observed that women living in urban areas have a higher mammographic density (MD) compared to women living in rural areas. This association might be explained by regional differences in reproductive and lifestyle factors or perhaps by variation in exposure to ambient air pollution as air pollution particles have been described to show estrogenic activity. We investigated the association between degree of urbanization and MD, and aimed to unravel the underlying etiology. 2,543 EPIC-NL participants were studied, and general linear models were used. Urbanization was categorized into five categories according to the number of addresses/km(2). Information on reproductive and lifestyle factors was obtained from the recruitment questionnaire. Air pollution exposure was estimated using land-use regression models. MD was expressed as percent density (PD) and dense area (DA), and was quantified using Cumulus. Women living in extremely urbanized areas had a higher PD (21.4%, 95% confidence interval (CI) 20.5-22.3%) compared to women living in not urbanized areas (16.1, 95% CI 14.5-17.8%, P trend < 0.01).The association persisted after adjustment for reproductive and lifestyle factors as well as for individual exposure to air pollution (adjusted PDextremely_urbanized = 22.1%, 95% CI 18.0-26.5% versus adjusted PDnot_urbanized = 16.9%, 95% CI 13.0-21.2, P trend < 0.01).The results for DA showed close similarity to the results for PD. We found evidence that degree of urbanization is associated with MD. The association could not be explained by differences in reproductive and lifestyle factors or by variation in air pollution exposure.

  8. Interleukin-6 g.-174G>C promoter polymorphism is associated with obesity in the EPIC-Potsdam Study.

    PubMed

    Klipstein-Grobusch, Kerstin; Möhlig, Matthias; Spranger, Joachim; Hoffmann, Kurt; Rodrigues, Fabio U S; Sharma, Arya M; Klaus, Susanne; Pfeiffer, Andreas F H; Boeing, Heiner

    2006-01-01

    Homozygosity for the interleukin-6 (IL-6) g.-174G>C promoter polymorphism has recently been associated with indices of overweight. Homozygous subjects were observed to have reduced energy expenditure, suggesting that lower IL-6 gene transcription, caused by the IL-6 g.-174G>C promoter polymorphism, may be associated with obesity. The aim of this study was to investigate the association of this polymorphism with long-term weight gain. For 334 normal weight (20 < BMI < or = 25 kg/m2) and 334 obese (BMI > 30 kg/m2) subjects matched by age and sex originating from the population-based EPIC-Potsdam Study, recalled weight change from age 25 to study enrollment was determined, the IL-6 g.-174G>C promoter polymorphism was defined, and plasma concentrations of IL-6 and C-reactive protein were measured. The IL-6 g.-174G>C promoter polymorphism was significantly associated with obesity (chi2 = 7,34, p = 0.026). Odds ratios for subjects with GC and CC genotypes for obesity were 1.19 (95% CI: 0.84 to 1.68; p = 0.323) and 1.91 (95% CI: 1.19 to 3.08; p = 0.007), respectively. Recalled weight change from age 25 years to study enrollment differed significantly according to genotype (p = 0.044) and was most pronounced in subjects with the CC genotype, suggesting that the IL-6 g.-174G>C promoter polymorphism is a susceptibility or modifying locus for common obesity and weight gain.

  9. Physical Activity, Bone Health, and Obesity in Peri-/Pre- and Postmenopausal Women: Results from the EPIC-Potsdam Study.

    PubMed

    Menzel, Juliane; di Giuseppe, Romina; Wientzek, Angelika; Kroke, Anja; Boeing, Heiner; Weikert, Cornelia

    2015-10-01

    Physical activity (PA) is suggested to increase the peak bone mass and to minimize age-related bone loss, and thereby to reduce the risk of osteoporosis. However, the relation between PA and bone health considering the obesity status is unclear so far. The present study examines the association between PA levels and calcaneal broadband ultrasound attenuation (BUA), particularly under consideration of obesity. Data from a population-based sample of 6776 German women from the EPIC-Potsdam cohort were analyzed. Calibrated PA data were used. Statistical analyses were stratified by menopausal and obesity status. Multiple linear regression was used to model the relationship between PA and BUA levels after adjustment for age, body mass index (BMI), smoking status, education, alcohol and calcium intake, and hormone use. Peri-/premenopausal had higher BUA levels (112.39 ± 10.05 dB/MHz) compared to postmenopausal women (106.44 ± 9.95 dB/MHz). In both groups, BUA levels were higher in the fourth compared to the lowest quartile of PA (p for trend < 0.05). In women with BMI < 30, but not BMI ≥ 30 kg/m(2), PA remained positively associated with BUA levels (p for interaction = 0.03). However, when waist circumference higher than 88 cm or body fat percentage (BF%) measures above the median were used to define obesity, a significant positive relationship was also observed in women with BMI < 30 kg/m(2) but with higher waist circumference or BF%. In conclusion, our results strengthen the hypothesis that PA has a positive influence on BUA levels, though dependent on weight. PMID:26108649

  10. Mediterranean Diet and Type 2 Diabetes Risk in the European Prospective Investigation Into Cancer and Nutrition (EPIC) Study

    PubMed Central

    2011-01-01

    OBJECTIVE To study the association between adherence to the Mediterranean dietary pattern (MDP) and risk of developing type 2 diabetes, across European countries. RESEARCH DESIGN AND METHODS We established a case-cohort study including 11,994 incident type 2 diabetic case subjects and a stratified subcohort of 15,798 participants selected from a total cohort of 340,234 participants with 3.99 million person-years of follow-up, from eight European cohorts participating in the European Prospective Investigation into Cancer and Nutrition (EPIC) study. The relative Mediterranean diet score (rMED) (score range 0–18) was used to assess adherence to MDP on the basis of reported consumption of nine dietary components characteristic of the Mediterranean diet. Cox proportional hazards regression, modified for the case-cohort design, was used to estimate the association between rMED and risk of type 2 diabetes, adjusting for confounders. RESULTS The multiple adjusted hazard ratios of type 2 diabetes among individuals with medium (rMED 7–10 points) and high adherence to MDP (rMED 11–18 points) were 0.93 (95% CI 0.86–1.01) and 0.88 (0.79–0.97), respectively, compared with individuals with low adherence to MDP (0–6 points) (P for trend 0.013). The association between rMED and type 2 diabetes was attenuated in people <50 years of age, in obese participants, and when the alcohol, meat, and olive oil components were excluded from the score. CONCLUSIONS In this large prospective study, adherence to the MDP, as defined by rMED, was associated with a small reduction in the risk of developing type 2 diabetes in this European population. PMID:21788627

  11. Association of Plasma Phospholipid n-3 and n-6 Polyunsaturated Fatty Acids with Type 2 Diabetes: The EPIC-InterAct Case-Cohort Study

    PubMed Central

    Forouhi, Nita G.; Schulze, Matthias B.; Zheng, Jusheng; Ye, Zheng; Kröger, Janine; Wang, Laura Yun; Summerhill, Keith; Griffin, Julian L.; Feskens, Edith J. M.; Affret, Aurélie; Amiano, Pilar; Boeing, Heiner; Dow, Courtney; Fagherazzi, Guy; Franks, Paul W.; Gonzalez, Carlos; Kaaks, Rudolf; Key, Timothy J.; Khaw, Kay Tee; Kühn, Tilman; Mortensen, Lotte Maxild; Nilsson, Peter M.; Overvad, Kim; Pala, Valeria; Palli, Domenico; Panico, Salvatore; Quirós, J. Ramón; Rolandsson, Olov; Sacerdote, Carlotta; Scalbert, Augustin; Slimani, Nadia; Spijkerman, Annemieke M. W.; Tjonneland, Anne; Tumino, Rosario; van der A, Daphne L.; Riboli, Elio

    2016-01-01

    Background Whether and how n-3 and n-6 polyunsaturated fatty acids (PUFAs) are related to type 2 diabetes (T2D) is debated. Objectively measured plasma PUFAs can help to clarify these associations. Methods and Findings Plasma phospholipid PUFAs were measured by gas chromatography among 12,132 incident T2D cases and 15,919 subcohort participants in the European Prospective Investigation into Cancer and Nutrition (EPIC)-InterAct study across eight European countries. Country-specific hazard ratios (HRs) were estimated using Prentice-weighted Cox regression and pooled by random-effects meta-analysis. We also systematically reviewed published prospective studies on circulating PUFAs and T2D risk and pooled the quantitative evidence for comparison with results from EPIC-InterAct. In EPIC-InterAct, among long-chain n-3 PUFAs, α-linolenic acid (ALA) was inversely associated with T2D (HR per standard deviation [SD] 0.93; 95% CI 0.88–0.98), but eicosapentaenoic acid (EPA) and docosahexaenoic acid (DHA) were not significantly associated. Among n-6 PUFAs, linoleic acid (LA) (0.80; 95% CI 0.77–0.83) and eicosadienoic acid (EDA) (0.89; 95% CI 0.85–0.94) were inversely related, and arachidonic acid (AA) was not significantly associated, while significant positive associations were observed with γ-linolenic acid (GLA), dihomo-GLA, docosatetraenoic acid (DTA), and docosapentaenoic acid (n6-DPA), with HRs between 1.13 to 1.46 per SD. These findings from EPIC-InterAct were broadly similar to comparative findings from summary estimates from up to nine studies including between 71 to 2,499 T2D cases. Limitations included potential residual confounding and the inability to distinguish between dietary and metabolic influences on plasma phospholipid PUFAs. Conclusions These large-scale findings suggest an important inverse association of circulating plant-origin n-3 PUFA (ALA) but no convincing association of marine-derived n3 PUFAs (EPA and DHA) with T2D. Moreover, they

  12. Application of a XMM-Newton EPIC Monte Carlo to Analysis And Interpretation of Data for Abell 1689, RXJ0658-55 And the Centaurus Clusters of Galaxies

    SciTech Connect

    Andersson, Karl E.; Peterson, J.R.; Madejski, G.M.; /SLAC /KIPAC, Menlo Park

    2007-04-17

    We propose a new Monte Carlo method to study extended X-ray sources with the European Photon Imaging Camera (EPIC) aboard XMM Newton. The Smoothed Particle Inference (SPI) technique, described in a companion paper, is applied here to the EPIC data for the clusters of galaxies Abell 1689, Centaurus and RXJ 0658-55 (the ''bullet cluster''). We aim to show the advantages of this method of simultaneous spectral-spatial modeling over traditional X-ray spectral analysis. In Abell 1689 we confirm our earlier findings about structure in temperature distribution and produce a high resolution temperature map. We also confirm our findings about velocity structure within the gas. In the bullet cluster, RXJ 0658-55, we produce the highest resolution temperature map ever to be published of this cluster allowing us to trace what looks like the motion of the bullet in the cluster. We even detect a south to north temperature gradient within the bullet itself. In the Centaurus cluster we detect, by dividing up the luminosity of the cluster in bands of gas temperatures, a striking feature to the north-east of the cluster core. We hypothesize that this feature is caused by a subcluster left over from a substantial merger that slightly displaced the core. We conclude that our method is very powerful in determining the spatial distributions of plasma temperatures and very useful for systematic studies in cluster structure.

  13. Fruit, vegetable, and fiber intake in relation to cancer risk: findings from the European Prospective Investigation into Cancer and Nutrition (EPIC).

    PubMed

    Bradbury, Kathryn E; Appleby, Paul N; Key, Timothy J

    2014-07-01

    Fruit, vegetables, and certain components of plant foods, such as fiber, have long been thought to protect against cancer. The European Prospective Investigation into Cancer and Nutrition (EPIC) is a prospective cohort that includes >500,000 participants from 10 European countries and has made a substantial contribution to knowledge in this research area. The purpose of this article is to summarize the findings published thus far from the EPIC study on the associations between fruit, vegetable, or fiber consumption and the risk of cancer at 14 different sites. The risk of cancers of the upper gastrointestinal tract was inversely associated with fruit intake but was not associated with vegetable intake. The risk of colorectal cancer was inversely associated with intakes of total fruit and vegetables and total fiber, and the risk of liver cancer was also inversely associated with the intake of total fiber. The risk of cancer of the lung was inversely associated with fruit intake but was not associated with vegetable intake; this association with fruit intake was restricted to smokers and might be influenced by residual confounding due to smoking. There was a borderline inverse association of fiber intake with breast cancer risk. For the other 9 cancer sites studied (stomach, biliary tract, pancreas, cervix, endometrium, prostate, kidney, bladder, and lymphoma) there were no reported significant associations of risk with intakes of total fruit, vegetables, or fiber.

  14. Evaluation of the Impact of Implementing the Emergency Medical Services Traumatic Brain Injury Guidelines in Arizona: The Excellence in Prehospital Injury Care (EPIC) Study Methodology

    PubMed Central

    Spaite, Daniel W.; Bobrow, Bentley J.; Stolz, Uwe; Sherrill, Duane; Chikani, Vatsal; Barnhart, Bruce; Sotelo, Michael; Gaither, Joshua B.; Viscusi, Chad; Adelson, P. David; Denninghoff, Kurt R.

    2014-01-01

    Traumatic brain injury (TBI) exacts a great toll on society. Fortunately, there is growing evidence that the management of TBI in the early minutes after injury may significantly reduce morbidity and mortality. In response, evidence-based prehospital and in-hospital TBI treatment guidelines have been established by authoritative bodies. However, no large studies have yet evaluated the effectiveness of implementing these guidelines in the prehospital setting. This article describes the background, design, implementation, emergency medical services (EMS) treatment protocols, and statistical analysis of a prospective, controlled (before/after), statewide study designed to evaluate the effect of implementing the EMS TBI guidelines—the Excellence in Prehospital Injury Care (EPIC) study (NIH/NINDS R01NS071049, “EPIC”; and 3R01NS071049-S1, “EPIC4Kids”). The specific aim of the study is to test the hypothesis that statewide implementation of the international adult and pediatric EMS TBI guidelines will significantly reduce mortality and improve nonmortality outcomes in patients with moderate or severe TBI. Furthermore, it will specifically evaluate the effect of guideline implementation on outcomes in the subgroup of patients who are intubated in the field. Over the course of the entire study (~9 years), it is estimated that approximately 25,000 patients will be enrolled. PMID:25112451

  15. The Association of Multiple Biomarkers of Iron Metabolism and Type 2 Diabetes - the EPIC-InterAct Study

    PubMed Central

    Podmore, Clara; Meidtner, Karina; Schulze, Matthias B; Scott, Robert A; Ramond, Anna; Butterworth, Adam S; Di Angelantonio, Emanuele; Danesh, John; Arriola, Larraitz; Barricarte, Aurelio; Boeing, Heiner; Clavel-Chapelon, Françoise; Cross, Amanda J; Dahm, Christina C; Fagherazzi, Guy; Franks, Paul W; Gavrila, Diana; Grioni, Sara; Gunter, Marc J; Gusto, Gaelle; Jakszyn, Paula; Katzke, Verena; Key, Timothy J; Kühn, Tilman; Mattiello, Amalia; Nilsson, Peter M; Olsen, Anja; Overvad, Kim; Palli, Domenico; Quirós, J. Ramón; Rolandsson, Olov; Sacerdote, Carlotta; Sánchez-Cantalejo, Emilio; Slimani, Nadia; Sluijs, Ivonne; Spijkerman, Annemieke MW; Tjonneland, Anne; Tumino, Rosario; van der A, Daphne L; van der Schouw, Yvonne T; Feskens, Edith JM; Forouhi, Nita G; Sharp, Stephen J; Riboli, Elio; Langenberg, Claudia; Wareham, Nicholas J

    2016-01-01

    Objective Observational studies show an association between ferritin and type 2 diabetes (T2D), suggesting a role of high iron stores for T2D development. However, ferritin is influenced by factors other than iron stores, which is less the case for other biomarkers of iron metabolism. We investigate associations of ferritin, transferrin saturation (TSAT), serum iron and transferrin with T2D incidence, to clarify the role of iron in the pathogenesis of T2D. Research and Design Methods The EPIC-InterAct study includes 12,403 incident T2D cases and a representative sub-cohort of 16,154 individuals from a European cohort with 3.99 million person-years of follow-up. We studied the prospective association of ferritin, TSAT, serum iron and transferrin with incident T2D in 11,052 cases and a random sub-cohort of 15,182 individuals and assessed whether these associations differed by subgroups of the population. Results Higher levels of ferritin and transferrin were associated with a higher risk of T2D [HR in men and women, respectively: 1.07 (95% CI: 1.01; 1.12) and 1.12 (1.05; 1.19) per 100 μg/L higher ferritin level; 1.11 (1.00; 1.24) and 1.22 (1.12; 1.33) per 0.5 g/L higher transferrin level] after adjustment for age, centre, BMI, physical activity, smoking status, education, hsCRP, ALT and GGT. Elevated TSAT (≥45% versus <45%) was associated with a lower risk of T2D in women [0.68 (0.54; 0.86)] but was not statistically significantly associated in men [0.90 (0.75; 1.08)]. Serum iron was not associated with T2D. The association of ferritin with T2D was stronger among leaner individuals (pinteraction<0.01). Conclusions The pattern of association of TSAT and transferrin with T2D suggests that the underlying relationship between iron stores and T2D is more complex than the simple link suggested by the association of ferritin with T2D. PMID:26861925

  16. Fracture Risk in Relation to Serum 25-Hydroxyvitamin D and Physical Activity: Results from the EPIC-Norfolk Cohort Study

    PubMed Central

    Julian, Cristina; Lentjes, Marleen A. H.; Huybrechts, Inge; Wareham, Nick; Khaw, Kay-Tee

    2016-01-01

    Vitamin D deficiency and physical inactivity have been associated with bone loss and fractures, but their combined effect has scarcely been studied either in younger or older adults. Therefore, we aimed to assess the associations between physical activity, age and 25-hydroxyvitamin D (25(OH)D) status separately and in combination with the incidence of fracture risk in the EPIC-Norfolk cohort study. Baseline (1993–1998) self-reported physical activity and serum 25(OH)D concentrations at follow-up (1998–2000) were collected in 14,624 men and women (aged 42–82 y between 1998 and 2000). Fracture incidence was ascertained up to March 2015. Cox proportional hazard model was used to determine HRs of fractures by plasma 25(OH)D (<30, 30 to <50, 50 to <70, 70 to <90, >90 nmol/L), age (<65 y and >65 y) and physical activity (inactive and active) categories, by follow-up time per 20 nmol/L increase in serum 25(OH)D and to explore age-25(OH)D and physical activity-25(OH)D interactions. The age-, sex-, and month-adjusted HRs (95% CIs) for all fractures (1183 fractures) by increasing vitamin D category were not significantly different. With additional adjustment for body mass index, smoking status, alcohol intake, supplement use and history of fractures, the fracture risk was 29% lower in those participants with 50 to 70 nmol/L compared with those in the lowest quintile (<30 nmol/L). Physical inactivity based on a single baseline assessment was not associated with fracture risk. Vitamin D status appeared inversely related to fractures in middle aged adults. In older adults, the relationship between vitamin D status and fracture risk was observed to be J-shaped. Clinical and public health practice in vitamin D supplementation could partially explain these findings, although definitive conclusions are difficult due to potential changes in exposure status over the long follow up period. PMID:27749911

  17. An Epic Mission

    ERIC Educational Resources Information Center

    Dubroy, Tashni-Ann

    2015-01-01

    For some students, intellectual curiosity and leadership are innate. For many, it must be nurtured. The Shaw University Honors College is an academic center of encouragement, interaction, and care for a diverse population of students. Many of them would otherwise never conceive of the marvelous opportunities and experiences they share during their…

  18. Insulin-like growth factor I and risk of epithelial invasive ovarian cancer by tumour characteristics: results from the EPIC cohort

    PubMed Central

    Ose, J; Fortner, R T; Schock, H; Peeters, P H; Onland-Moret, N C; Bueno-de-Mesquita, H B; Weiderpass, E; Gram, I T; Overvad, K; Tjonneland, A; Dossus, L; Fournier, A; Baglietto, L; Trichopoulou, A; Benetou, V; Trichopoulos, D; Boeing, H; Masala, G; Krogh, V; Matiello, A; Tumino, R; Popovic, M; Obón-Santacana, M; Larrañaga, N; Ardanaz, E; Sánchez, M-J; Menéndez, V; Chirlaque, M-D; Travis, R C; Khaw, K-T; Brändstedt, J; Idahl, A; Lundin, E; Rinaldi, S; Kuhn, E; Romieu, I; Gunter, M J; Merritt, M A; Riboli, E; Kaaks, R

    2015-01-01

    Background: Prospective studies on insulin-like growth factor I (IGF-I) and epithelial ovarian cancer (EOC) risk are inconclusive. Data suggest risk associations vary by tumour characteristics. Methods: We conducted a nested case–control study in the European Prospective Investigation into Cancer and Nutrition (EPIC) to evaluate IGF-I concentrations and EOC risk by tumour characteristics (n=565 cases). Multivariable conditional logistic regression models were used to estimate associations. Results: We observed no association between IGF-I and EOC overall or by tumour characteristics. Conclusions: In the largest prospective study to date was no association between IGF-I and EOC risk. Pre-diagnostic serum IGF-I concentrations may not influence EOC risk. PMID:25349976

  19. Estimated dietary intakes of flavonols, flavanones and flavones in the European Prospective Investigation into Cancer and Nutrition (EPIC) 24 hour dietary recall cohort.

    PubMed

    Zamora-Ros, Raul; Knaze, Viktoria; Luján-Barroso, Leila; Slimani, Nadia; Romieu, Isabelle; Fedirko, Veronika; de Magistris, Maria Santucci; Ericson, Ulrica; Amiano, Pilar; Trichopoulou, Antonia; Dilis, Vardis; Naska, Androniki; Engeset, Dagrun; Skeie, Guri; Cassidy, Aedin; Overvad, Kim; Peeters, Petra H M; Huerta, José María; Sánchez, María-José; Quirós, J Ramón; Sacerdote, Carlotta; Grioni, Sara; Tumino, Rosario; Johansson, Gerd; Johansson, Ingegerd; Drake, Isabel; Crowe, Francesca L; Barricarte, Aurelio; Kaaks, Rudolf; Teucher, Birgit; Bueno-de-Mesquita, H Bas; van Rossum, Caroline T M; Norat, Teresa; Romaguera, Dora; Vergnaud, Anne-Claire; Tjønneland, Anne; Halkjær, Jytte; Clavel-Chapelon, Françoise; Boutron-Ruault, Marie-Christine; Touillaud, Marina; Salvini, Simonetta; Khaw, Kay-Thee; Wareham, Nicholas; Boeing, Heiner; Förster, Jana; Riboli, Elio; González, Carlos A

    2011-12-01

    Flavonols, flavanones and flavones (FLAV) are sub-classes of flavonoids that exert cardioprotective and anti-carcinogenic properties in vitro and in vivo. We aimed to estimate the FLAV dietary intake, their food sources and associated lifestyle factors in ten European countries participating in the European Prospective Investigation into Cancer and Nutrition (EPIC) study. FLAV intake and their food sources for 36 037 subjects, aged between 35 and 74 years, in twenty-seven study centres were obtained using standardised 24 h dietary recall software (EPIC-SOFT). An ad hoc food composition database on FLAV was compiled using data from US Department of Agriculture and Phenol-Explorer databases and was expanded using recipes, estimations and flavonoid retention factors in order to increase its correspondence with the 24 h dietary recall. Our results showed that the highest FLAV-consuming centre was the UK health-conscious group, with 130·9 and 97·0 mg/d for men and women, respectively. The lowest FLAV intakes were 36·8 mg/d in men from Umeå and 37·2 mg/d in women from Malmö (Sweden). The flavanone sub-class was the main contributor to the total FLAV intake ranging from 46·6 to 52·9 % depending on the region. Flavonols ranged from 38·5 to 47·3 % and flavones from 5·8 to 8·6 %. FLAV intake was higher in women, non-smokers, increased with level of education and physical activity. The major food sources were citrus fruits and citrus-based juices (especially for flavanones), tea, wine, other fruits and some vegetables. We concluded that the present study shows heterogeneity in intake of these three sub-classes of flavonoids across European regions and highlights differences by sex and other sociodemographic and lifestyle factors.

  20. Acrylamide and glycidamide hemoglobin adducts and epithelial ovarian cancer: a nested case-control study in non-smoking postmenopausal women from the EPIC cohort

    PubMed Central

    Obón-Santacana, Mireia; Lujan-Barroso, Leila; Travis, Ruth C.; Freisling, Heinz; Ferrari, Pietro; Severi, Gianluca; Baglietto, Laura; Boutron-Ruault, Marie-Christine; Fortner, Renée T.; Ose, Jennifer; Boeing, Heiner; Menéndez, Virginia; Sánchez-Cantalejo, Emilio; Chamosa, Saioa; Huerta Castaño, José María; Ardanaz, Eva; Khaw, Kay-Tee; Wareham, Nick; Merritt, Melissa A.; Gunter, Marc J.; Trichopoulou, Antonia; Papatesta, Eleni-Maria; Klinaki, Eleni; Saieva, Calogero; Tagliabue, Giovanna; Tumino, Rosario; Sacerdote, Carlotta; Mattiello, Amalia; Bueno-de-Mesquita, H.B.; Peeters, Petra H.; Onland-Moret, N. Charlotte; Idahl, Annika; Lundin, Eva; Weiderpass, Elisabete; Vesper, Hubert W.; Riboli, Elio; Duell, Eric J

    2015-01-01

    Background Acrylamide was classified as ‘probably carcinogenic to humans (group 2A)’ by the International Agency for Research on Cancer. Epithelial ovarian cancer (EOC) is the fourth cause of cancer mortality in women. Five epidemiological studies have evaluated the association between EOC risk and dietary acrylamide intake assessed using food frequency questionnaires, and one nested case-control study evaluated hemoglobin adducts of acrylamide (HbAA) and its metabolite glycidamide (HbGA) and EOC risk; the results of these studies were inconsistent. Methods A nested case-control study in non-smoking postmenopausal women (334 cases, 417 controls) was conducted within the European Prospective Investigation into Cancer and Nutrition (EPIC) cohort. Unconditional logistic regression models were used to estimate odds ratios (OR) and 95% confidence intervals (CI) for the association between HbAA, HbGA, HbAA+HbGA, and HbGA/HbAA and EOC and invasive serous EOC risk. Results No overall associations were observed between biomarkers of acrylamide exposure analyzed in quintiles and EOC risk; however, positive associations were observed between some middle quintiles of HbGA and HbAA+HbGA. Elevated but non-statistically significant ORs for serous EOC were observed for HbGA and HbAA+HbGA (ORQ5vsQ1:1.91, 95%CI:0.96-3.81 and ORQ5vsQ1:1.90, 95%CI:0.94-3.83, respectively); however, no linear dose-response trends were observed. Conclusion This EPIC nested case-control study failed to observe a clear association between biomarkers of acrylamide exposure and the risk of EOC or invasive serous EOC. Impact It is unlikely that dietary acrylamide exposure increases ovarian cancer risk; however, additional studies with larger sample size should be performed to exclude any possible association with EOC risk. PMID:26376083

  1. Acrylamide and glycidamide hemoglobin adduct levels and endometrial cancer risk: A nested case-control study in nonsmoking postmenopausal women from the EPIC cohort.

    PubMed

    Obón-Santacana, Mireia; Freisling, Heinz; Peeters, Petra H; Lujan-Barroso, Leila; Ferrari, Pietro; Boutron-Ruault, Marie-Christine; Mesrine, Sylvie; Baglietto, Laura; Turzanski-Fortner, Renee; Katzke, Verena A; Boeing, Heiner; Quirós, J Ramón; Molina-Portillo, Elena; Larrañaga, Nerea; Chirlaque, María-Dolores; Barricarte, Aurelio; Khaw, Kay-Tee; Wareham, Nick; Travis, Ruth C; Merritt, Melissa A; Gunter, Marc J; Trichopoulou, Antonia; Lagiou, Pagona; Naska, Androniki; Palli, Domenico; Sieri, Sabina; Tumino, Rosario; Fiano, Valentina; Galassom, Rocco; Bueno-de-Mesquita, H B As; Onland-Moret, N Charlotte; Idahl, Annika; Lundin, Eva; Weiderpass, Elisabete; Vesper, Hubert; Riboli, Elio; Duell, Eric J

    2016-03-01

    Acrylamide, classified in 1994 by IARC as "probably carcinogenic to humans," was discovered in 2002 in some heat-treated, carbohydrate-rich foods. Four prospective studies have evaluated the association between dietary acrylamide intake and endometrial cancer (EC) risk with inconsistent results. The purpose of this nested case-control study, based on the European Prospective Investigation into Cancer and Nutrition (EPIC) cohort, was to evaluate, for the first time, the association between hemoglobin adducts of acrylamide (HbAA) and glycidamide (HbGA) and the risk of developing EC in non-smoking postmenopausal women. Hemoglobin adducts were measured in red blood cells by HPLC/MS/MS. Four exposure variables were evaluated: HbAA, HbGA, their sum (HbAA+HbGA), and their ratio (HbGA/HbAA). The association between hemoglobin adducts and EC was evaluated using unconditional multivariable logistic regression models, and included 383 EC cases (171 were type-I EC), and 385 controls. Exposure variables were analyzed in quintiles based on control distributions. None of the biomarker variables had an effect on overall EC (HRHbAA;Q5vsQ1 : 0.84, 95%CI: 0.49-1.48; HRHbGA;Q5vsQ1 : 0.94, 95%CI: 0.54-1.63) or type-I EC risk. Additionally, none of the subgroups investigated (BMI < 25 vs. ≥25 kg m(-2) , alcohol drinkers vs. never drinkers, oral contraceptive users vs. non-users) demonstrated effect measure modification. Hemoglobin adducts of acrylamide or glycidamide were not associated with EC or type-I EC risk in 768 nonsmoking postmenopausal women from the EPIC cohort.

  2. Validation of self diagnosis of high blood pressure in a sample of the Spanish EPIC cohort: overall agreement and predictive values

    PubMed Central

    Tormo, M; Navarro, C; Chirlaque, M; Barber, X; the, E

    2000-01-01

    STUDY OBJECTIVE—High blood pressure is a variable related to several chronic conditions whose repeated measurement in large cohort studies is often not feasible having to rely on the self reporting of the subjects. The aim of the study is to validate such self diagnosis in a sample of members from the Spanish EPIC cohort study.
DESIGN—Comparison of high blood pressure self diagnosis with the information provided by the personal medical record drawn from the primary health centre of reference for such population.
SETTING—A small town near the EPIC-Murcia centre, one of five Spanish EPIC centres located in the south east, where inclusion in the cohort was offered to the general population.
PARTICIPANTS—The agreement between self reported high blood pressure status and data from medical records was measured in a representative sample of men and women (n= 248) aged 30-69 years. Medical records were studied for a diagnosis of high blood pressure, an anti-hypertensive pharmacological treatment or subject's inclusion in a hypertension control programme run in the medical centre only for hypertensive people (definite high blood pressure cases). As well, in the absence of such a diagnosis, medical annotations of systolic or diastolic high blood pressure⩾ 140/90 mm Hg (possible high blood pressure cases) were considered. Sensitivity, specificity, positive and negative predictive values and κ scores were calculated for all, definite and possible high blood pressure cases. Variables associated with the probability of having a true positive or negative self report of high blood pressure were also tested.
MAIN RESULTS—As expected, sensitivity was higher among definite cases (72.7%) than among possible cases (31.6%). Accordingly, the agreement between self report and medical record was higher for definite cases (κ = 0.65) than for possible (κ = 0.29) cases leading to a moderate overall agreement for all cases (κ = 0.58; 95% CI: 0.47, 0.69). Having

  3. Differences in the prospective association between individual plasma phospholipid saturated fatty acids and incident type 2 diabetes: the EPIC-InterAct case-cohort study

    PubMed Central

    Forouhi, Nita G; Koulman, Albert; Sharp, Stephen J; Imamura, Fumiaki; Kröger, Janine; Schulze, Matthias B; Crowe, Francesca L; Huerta, José María; Guevara, Marcela; Beulens, Joline WJ; van Woudenbergh, Geertruida J; Wang, Laura; Summerhill, Keith; Griffin, Julian L; Feskens, Edith JM; Amiano, Pilar; Boeing, Heiner; Clavel-Chapelon, Françoise; Dartois, Laureen; Fagherazzi, Guy; Franks, Paul W; Gonzalez, Carlos; Jakobsen, Marianne Uhre; Kaaks, Rudolf; Key, Timothy J; Khaw, Kay-Tee; Kühn, Tilman; Mattiello, Amalia; Nilsson, Peter M; Overvad, Kim; Pala, Valeria; Palli, Domenico; Quirós, J Ramón; Rolandsson, Olov; Roswall, Nina; Sacerdote, Carlotta; Sánchez, María-José; Slimani, Nadia; Spijkerman, Annemieke MW; Tjonneland, Anne; Tormo, Maria-José; Tumino, Rosario; van der A, Daphne L; van der Schouw, Yvonne T; Langenberg, Claudia; Riboli, Elio; Wareham, Nicholas J

    2014-01-01

    Summary Background Conflicting evidence exists regarding the association between saturated fatty acids (SFAs) and type 2 diabetes. In this longitudinal case-cohort study, we aimed to investigate the prospective associations between objectively measured individual plasma phospholipid SFAs and incident type 2 diabetes in EPIC-InterAct participants. Methods The EPIC-InterAct case-cohort study includes 12 403 people with incident type 2 diabetes and a representative subcohort of 16 154 individuals who were selected from a cohort of 340 234 European participants with 3·99 million person-years of follow-up (the EPIC study). Incident type 2 diabetes was ascertained until Dec 31, 2007, by a review of several sources of evidence. Gas chromatography was used to measure the distribution of fatty acids in plasma phospholipids (mol%); samples from people with type 2 diabetes and subcohort participants were processed in a random order by centre, and laboratory staff were masked to participant characteristics. We estimated country-specific hazard ratios (HRs) for associations per SD of each SFA with incident type 2 diabetes using Prentice-weighted Cox regression, which is weighted for case-cohort sampling, and pooled our findings using random-effects meta-analysis. Findings SFAs accounted for 46% of total plasma phospholipid fatty acids. In adjusted analyses, different individual SFAs were associated with incident type 2 diabetes in opposing directions. Even-chain SFAs that were measured (14:0 [myristic acid], 16:0 [palmitic acid], and 18:0 [stearic acid]) were positively associated with incident type 2 diabetes (HR [95% CI] per SD difference: myristic acid 1·15 [95% CI 1·09–1·22], palmitic acid 1·26 [1·15–1·37], and stearic acid 1·06 [1·00–1·13]). By contrast, measured odd-chain SFAs (15:0 [pentadecanoic acid] and 17:0 [heptadecanoic acid]) were inversely associated with incident type 2 diabetes (HR [95% CI] per 1 SD difference: 0·79 [0·73–0·85] for

  4. The Broad Iron K-alpha line of Cygnus X-1 as Seen by XMM-Newton in the EPIC-pn Modified Timing Mode

    NASA Technical Reports Server (NTRS)

    Duro, Refiz; Dauser, Thomas; Wilms, Jorn; Pottschmidt, Katja; Nowak, Michael A.; Fritz, Sonja; Kendziorra, Eckhard; Kirsch, Marcus G. F.; Reynolds, Christopher S.; Staubert, Rudiger

    2011-01-01

    We present the analysis of the broadened, flourescent iron K(alpha) line in simultaneous XMM-Newton and RXTE data from the black hole Cygnus X-I. The XMM-Newton data were taken in a modified version of the Timing Mode of the EPIC-pn camera. In this mode the lower energy threshold of the instrument is increased to 2.8 keV to avoid telemetry drop outs due to the brightness of the source, while at the same time preserving the signal to noise ratio in the Fe K(alpha) band. We find that the best-fit spectrum consists of the sum of an exponentially cut-off power-law and relativistically smeared, ionized reflection. The shape of the broadened Fe K(alpha) feature is due to strong Compton broadening combined with relativistic broadening. Assuming a standard, thin accretion disk, the black hole is close to maximally rotating. Key words. X-rays: binaries - black hole physics - gravitation

  5. Evidence of Spin and Energy Extraction in a Galactic Black Hole Candidate: The XMM-NEWTON/EPIC SPECTRUM of XTE 11650-500

    NASA Technical Reports Server (NTRS)

    Miller, J. M.; Fabian, A. C.; Wunands, R.; Reynolds, C. S.; Ehle, M.; Freyberg, M. J.; VanDerKlis, M.; Lewin, W. H. G.; Sanchez-Fernandez, C.; Castro-Tirado, A. J.

    2002-01-01

    We observed the Galactic black hole candidate XTE J1650-500 early in its fall of 2001 outburst with the XMM-Newton European Photon Imaging pn Camera (EPIC-pn). The observed spectrum is consistent with the source having been in the very high state. We h d a broad, skewed Fe Kar emission line that suggests the primary in this system may be a Kerr black hole and that indicates a steep disk emissivity profile that is hard to explain in terms of a standard accretion disk model. These results are quantitatively and qualitatively similar to those from an XMM-Newton observation of the Seyfert galaxy MCG -6-30-15. The steep emissivity in MCG -6-30-15 may be explained by the extraction and dissipation of rotational energy from a black hole with nearly maximal angular momentum or from material in the plunging region via magnetic connections to the inner accretion disk. If this process is at work in both sources, an exotic but fundamental general relativistic prediction may be confirmed across a factor of l0(exp 6) in black hole mass. We discuss these results in terms of the accretion flow geometry in stellar-mass black holes and the variety of enigmatic phenomena often observed in the very high state.

  6. Population and assay thresholds for the predictive value of lipoprotein (a) for coronary artery disease: the EPIC-Norfolk Prospective Population Study.

    PubMed

    Verbeek, Rutger; Boekholdt, S Matthijs; Stoekenbroek, Robert M; Hovingh, G Kees; Witztum, Joseph L; Wareham, Nicholas J; Sandhu, Manjinder S; Khaw, Kay-Tee; Tsimikas, Sotirios

    2016-04-01

    Variable agreement exists between different lipoprotein (a) [Lp(a)] measurement methods, but their clinical relevance remains unclear. The predictive value of Lp(a) measured by two different assays [Randox and University of California, San Diego (UCSD)] was determined in 623 coronary artery disease (CAD) cases and 948 controls in a case-control study within the EPIC-Norfolk Prospective Population Study. Participants were divided into sex-specific quintiles, and by Lp(a) <50 versus ∼50 mg/dl, which represents the 80th percentile in northern European subjects. Randox and UCSD Lp(a) levels were strongly correlated; Spearman's correlation coefficients for men, women, and sexes combined were 0.905, 0.915, and 0.909, respectively (P< 0.001 for each). The >80th percentile cutoff values, however, were 36 mg/dl and 24 mg/dl for the Randox and UCSD assays, respectively. Despite this, Lp(a) levels were significantly associated with CAD risk, with odds ratios of 2.18 (1.58-3.01) and 2.35 (1.70-3.26) for people in the top versus bottom Lp(a) quintile for the Randox and UCSD assays, respectively. This study demonstrates that CAD risk is present at lower Lp(a) levels than the currently suggested optimal Lp(a) level of <50 mg/dl. Appropriate thresholds may need to be population and assay specific until Lp(a) assays are standardized and Lp(a) thresholds are evaluated broadly across all populations at risk for CVD and aortic stenosis.

  7. Differentially methylated microRNAs in prediagnostic samples of subjects who developed breast cancer in the European Prospective Investigation into Nutrition and Cancer (EPIC-Italy) cohort.

    PubMed

    Cordero, Francesca; Ferrero, Giulio; Polidoro, Silvia; Fiorito, Giovanni; Campanella, Gianluca; Sacerdote, Carlotta; Mattiello, Amalia; Masala, Giovanna; Agnoli, Claudia; Frasca, Graziella; Panico, Salvatore; Palli, Domenico; Krogh, Vittorio; Tumino, Rosario; Vineis, Paolo; Naccarati, Alessio

    2015-10-01

    The crosstalk between microRNAs (miRNAs) and other epigenetic factors may lead to novel hypotheses about carcinogenesis identifying new targets for research. Because a single miRNA can regulate multiple downstream target genes, its altered expression may potentially be a sensitive biomarker to detect early malignant transformation and improve diagnosis and prognosis. In the current study, we tested the hypothesis that altered methylation of miRNA encoding genes, associated with deregulated mature miRNA expression, may be related to dietary and lifestyle factors and may contribute to cancer development. In a case-control study nested in a prospective cohort (EPIC-Italy), we analysed DNA methylation levels of miRNA encoding genes (2191 CpG probes related to 517 genes) that are present in the Infinium Human Methylation450 BeadChip array in prediagnostic peripheral white blood cells of subjects who developed colorectal cancer (CRC, n = 159) or breast cancer (BC, n = 166) and matched subjects who remained clinically healthy. In the whole cohort, several differentially methylated miRNA genes were observed in association with age, sex, smoking habits and physical activity. Interestingly, in the case-control study, eight differentially methylated miRNAs were identified in subjects who went on to develop BC (miR-328, miR-675, miR-1307, miR-1286, miR-1275, miR-1910, miR-24-1 and miR-548a-1; all Bonferroni-adjusted P < 0.05). No significant associations were found with CRC. Assuming that altered methylation of miRNAs detectable in blood may be present before diagnosis, it may represent a biomarker for early detection or risk of cancer and may help to understand the cascade of events preceding tumour onset.

  8. Meat and heme iron intake and risk of squamous cell carcinoma of the upper aero-digestive tract in the European Prospective Investigation into Cancer and Nutrition (EPIC)

    PubMed Central

    Steffen, Annika; Bergmann, Manuela M.; Sánchez, María-José; Chirlaque, Maria-Dolores; Jakszyn, Paula; Amiano, Pilar; Quirós, J. Ramón; Gurrea, Aurelio Barricarte; Ferrari, Pietro; Romieu, Isabelle; Fedirko, Veronika; Bueno-de-Mesquita, H. B(as).; Siersema, Peter D.; Peeters, Petra HM; Khaw, Kay-Tee; Wareham, Nick; Allen, Naomi E.; Crowe, Francesca L.; Skeie, Guri; Hallmanns, Göran; Johansson, Ingegerd; Borgquist, Signe; Ericson, Ulrika; Egeberg, Rikke; Tjønneland, Anne; Overvad, Kim; Grote, Verena; Li, Kuanrong; Trichopoulou, Antonia; Oikonomidou, Despoina; Pantzalis, Menelaos; Tumino, Rosario; Panico, Salvatore; Palli, Domenico; Krogh, Vittorio; Naccarati, Alessio; Mouw, Traci; Vergnaud, Anne-Claire; Norat, Teresa; Boeing, Heiner

    2012-01-01

    Background Evidence from prospective studies on intake of meat and fish and risk of squamous cell carcinoma (SCC) of the upper aero-digestive tract (UADT) is scarce. We prospectively investigated the association of meat and fish intake with risk of SCC of the UADT and the possible mechanism via heme iron in the large multi-center European Prospective Investigation into Cancer and Nutrition (EPIC) study. Methods Multivariable proportional hazards models were used to estimate relative risks of SCC of the UADT in relation to intake of total meat, as well as subtypes of meat, fish and heme iron among 348,738 individuals from 7 European countries. Results During an average follow-up of 11.8 years, a total of 682 incident cases of UADT SCC were accrued. Intake of processed meat was positively associated with risk of SCC of the UADT in the total cohort (highest versus lowest quintile: RR=1.41; 95% CI=1.03-1.94), however, in stratified analyses, this association was confined to the group of current smokers (highest versus lowest quintile: RR=1.89; 95% CI=1.22-2.93). Red meat, poultry, fish and heme iron were not consistently related to UADT SCC. Conclusion Higher intake of processed meat was positively associated with SCC of the UADT among smokers. Although this finding was stable in various sensitivity analyses, we cannot rule out residual confounding by smoking. Confirmation in future studies and identification of biological mechanisms is warranted. Impact Smokers may further increase their risk for SCC of the UADT if they additionally consume large amounts of processed meat. PMID:23033453

  9. Bulky DNA adducts, 4-aminobiphenyl-haemoglobin adducts and diet in the European Prospective Investigation into Cancer and Nutrition (EPIC) prospective study.

    PubMed

    Peluso, Marco; Airoldi, Luisa; Munnia, Armelle; Colombi, Alessandro; Veglia, Fabrizio; Autrup, Herman; Dunning, Alison; Garte, Seymour; Gormally, Emmanuelle; Malaveille, Christian; Matullo, Giuseppe; Overvad, Kim; Raaschou-Nielsen, Ole; Clavel-Chapelon, Francoise; Linseisen, Jacob; Boeing, Heiner; Trichopoulou, Antonia; Palli, Domenico; Krogh, Vittorio; Tumino, Rosario; Panico, Salvatore; Bueno-De-Mesquita, Bas H; Peeters, Petra H; Kumle, Merethe; Agudo, Antonio; Martinez, Carmen; Dorronsoro, Miren; Barricarte, Aurelio; Tormo, Marìa Jose; Quiros, José Ramón; Berglund, Goran; Jarvholm, Bengt; Day, Nicholas E; Key, Timothy J; Saracci, Rodolfo; Kaaks, Rudolf; Riboli, Elio; Bingham, Shelia; Vineis, Paolo

    2008-09-01

    In contrast to some extensively examined food mutagens, for example, aflatoxins, N-nitrosamines and heterocyclic amines, some other food contaminants, in particular polycyclic aromatic hydrocarbons (PAH) and other aromatic compounds, have received less attention. Therefore, exploring the relationships between dietary habits and the levels of biomarkers related to exposure to aromatic compounds is highly relevant. We have investigated in the European Prospective Investigation into Cancer and Nutrition (EPIC) cohort the association between dietary items (food groups and nutrients) and aromatic DNA adducts and 4-aminobiphenyl-Hb adducts. Both types of adducts are biomarkers of carcinogen exposure and possibly of cancer risk, and were measured, respectively, in leucocytes and erythrocytes of 1086 (DNA adducts) and 190 (Hb adducts) non-smokers. An inverse, statistically significant, association has been found between DNA adduct levels and dietary fibre intake (P = 0.02), vitamin E (P = 0.04) and alcohol (P = 0.03) but not with other nutrients or food groups. Also, an inverse association between fibre and fruit intake, and BMI and 4-aminobiphenyl-Hb adducts (P = 0.03, 0.04, and 0.03 respectively) was observed. After multivariate regression analysis these inverse correlations remained statistically significant, except for the correlation adducts v. fruit intake. The present study suggests that fibre intake in the usual range can modify the level of DNA or Hb aromatic adducts, but such role seems to be quantitatively modest. Fibres could reduce the formation of DNA adducts in different manners, by diluting potential food mutagens and carcinogens in the gastrointestinal tract, by speeding their transit through the colon and by binding carcinogenic substances.

  10. Origin of central abundances in the hot intra-cluster medium. I. Individual and average abundance ratios from XMM-Newton EPIC

    NASA Astrophysics Data System (ADS)

    Mernier, F.; de Plaa, J.; Pinto, C.; Kaastra, J. S.; Kosec, P.; Zhang, Y.-Y.; Mao, J.; Werner, N.

    2016-08-01

    The hot intra-cluster medium (ICM) is rich in metals, which are synthesised by supernovae (SNe) explosions and accumulate over time into the deep gravitational potential well of clusters of galaxies. Since most of the elements visible in X-rays are formed by type Ia (SNIa) and/or core-collapse (SNcc) supernovae, measuring their abundances gives us direct information on the nucleosynthesis products of billions of SNe since the epoch of the star formation peak (z ~ 2-3). In this study, we use the EPIC and RGS instruments on board XMM-Newton to measure the abundances of nine elements (O, Ne, Mg, Si, S, Ar, Ca, Fe, and Ni) from a sample of 44 nearby cool-core galaxy clusters, groups, and elliptical galaxies. We find that the Fe abundance shows a large scatter (~20-40%) over the sample, within 0.2r500 and especially 0.05r500. Unlike the absolute Fe abundance, the abundance ratios (X/Fe) are uniform over the considered temperature range (~0.6-8 keV) and with a limited scatter. In addition to an unprecedented treatment of systematic uncertainties, we provide the most accurate abundance ratios measured so far in the ICM, including Cr/Fe and Mn/Fe which we firmly detected (>4σ with MOS and pn independently). We find that Cr/Fe, Mn/Fe, and Ni/Fe differ significantly from the proto-solar values. However, the large uncertainties in the proto-solar abundances prevent us from making a robust comparison between the local and the intra-cluster chemical enrichments. We also note that, interestingly, and despite the large net exposure time (~4.5 Ms) of our dataset, no line emission feature is seen around ~3.5 keV.

  11. Models of the merger between the two long-lived giant anticyclones BE and FA in the Jovian atmosphere using the EPIC code.

    NASA Astrophysics Data System (ADS)

    Morales-Juberías, R.; Sanchez-Lavega, A.; Hueso, R.; Dowling, T. E.

    2001-11-01

    We use the EPIC code (Dowling et al. Icarus, 132, 221. 1998) to simulate the merger that took place in March - April 2000 between the white ovals BE and FA (A. Sanchez-Lavega et al., Icarus, 142, 116. 1999, and Icarus, 149, 491. 2001). This merger was the final stage of a more complex interaction that started the 1st of October 1999 involving also the GRS and a small cyclone cell located between the two white ovals. One of the most important issues we try to reproduce here is the observation that the merger at the NH3 cloud level (pressures ~ 0.4 - 1 bars) and in upper levels (hazes at 0.15 - 0.20 bar) was different. While at high altitude the vortices orbited around each other before merging, at the ammonia cloud level they formed a `peanut-shaped' structure without any appreciable rotation before they joined. The other important issue that we try to adjust in our simulations is the critical distance to merge ( ~ 9700 km) as well as the `merging time' ( ~ 21 days) once this critical distance is reached. We present a series of simulations on the stability, motions and interactions of the vortices for different sets of the vertical temperature profile, the zonal wind velocity structure (meridional and vertical profiles), and the intensity and vertical extension of the vortices themselves. The vertical analysis covers a pressure range from 1 mbar to 10 bar, allowing to perform a characterization of the upper Jovian troposphere. This work has been supported by an Spanish - US Fulbright cooperation project (2000-2001). The Spanish team was also supported by MCYT research project PNAYA2000-0932. R. Morales acknowledges a fellowship from Universidad del País Vasco and R. Hueso a postdoctoral fellowship from Gobierno Vasco.

  12. Early Anti-Pseudomonal Acquisition in Young Patients with Cystic Fibrosis: Rationale and Design of the EPIC Clinical Trial and Observational Study

    PubMed Central

    Treggiari, Miriam M; Rosenfeld, Margaret; Mayer-Hamblett, Nicole; Retsch-Bogart, George; Gibson, Ronald L.; Williams, Judy; Emerson, Julia; Kronmal, Richard A; Ramsey, Bonnie W

    2009-01-01

    Background The primary cause of morbidity and mortality in patients with cystic fibrosis (CF) is progressive obstructive pulmonary disease due to chronic endobronchial infection, particularly with Pseudomonas aeruginosa (Pa). Risk factors for and clinical impact of early Pa infection in young CF patients are less well understood. Purpose The present studies are designed to evaluate risk factors and outcomes associated with early Pa acquisition, and the benefits and harms of four anti-pseudomonal treatment regimens in young CF patients initiated after the first Pa positive respiratory culture. Methods The Early Pseudomonas Infection Control (EPIC) program consists of two studies, a randomized multicenter trial in CF patients ages 1–12 years at first isolation of Pa from a respiratory culture, and a longitudinal cohort study enrolling Pa-negative patients. Using a factorial design, trial participants are assigned for 18 months to either anti-pseudomonal treatment on a scheduled quarterly basis (cycled therapy) or based on recovery of Pa from quarterly respiratory cultures (culture-based therapy). The study drugs include inhaled tobramycin (300 mg BID) for 28 days, combined with either oral ciprofloxacin (15–20 mg/kg BID) or oral placebo for 14 days. The primary endpoints of the trial are the time to pulmonary exacerbation requiring IV antibiotics or hospitalization for respiratory symptoms, and the proportion of patients with new Pa-positive respiratory cultures during the study. The broad goals of the observational study are to describe the risk factors and outcomes associated with early acquisition of Pa. 306 patients were randomized in the clinical trial and 1,787 were enrolled in the cohort study. Conclusions These companion studies will provide valuable epidemiological and microbiological information on early CF lung disease and Pa acquisition, and safety and clinical efficacy data on anti-pseudomonal treatment strategies for early Pa infections in the

  13. Flavonoid and lignan intake in relation to bladder cancer risk in the European Prospective Investigation into Cancer and Nutrition (EPIC) study

    PubMed Central

    Zamora-Ros, R; Sacerdote, C; Ricceri, F; Weiderpass, E; Roswall, N; Buckland, G; St-Jules, D E; Overvad, K; Kyrø, C; Fagherazzi, G; Kvaskoff, M; Severi, G; Chang-Claude, J; Kaaks, R; Nöthlings, U; Trichopoulou, A; Naska, A; Trichopoulos, D; Palli, D; Grioni, S; Mattiello, A; Tumino, R; Gram, I T; Engeset, D; Huerta, J M; Molina-Montes, E; Argüelles, M; Amiano, P; Ardanaz, E; Ericson, U; Lindkvist, B; Nilsson, L M; Kiemeney, L A; Ros, M; Bueno-de-Mesquita, H B; Peeters, P H M; Khaw, K-T; Wareham, N J; Knaze, V; Romieu, I; Scalbert, A; Brennan, P; Wark, P; Vineis, P; Riboli, E; González, C A

    2014-01-01

    Background: There is growing evidence of the protective role of dietary intake of flavonoids and lignans on cancer, but the association with bladder cancer has not been thoroughly investigated in epidemiological studies. We evaluated the association between dietary intakes of total and subclasses of flavonoids and lignans and risk of bladder cancer and its main morphological type, urothelial cell carcinoma (UCC), within the European Prospective Investigation into Cancer and Nutrition (EPIC) study. Methods: A cohort of 477 312 men and women mostly aged 35–70 years, were recruited in 10 European countries. At baseline, dietary flavonoid and lignan intakes were estimated using centre-specific validated questionnaires and a food composition database based on the Phenol-Explorer, the UK Food Standards Agency and the US Department of Agriculture databases. Results: During an average of 11 years of follow-up, 1575 new cases of primary bladder cancer were identified, of which 1425 were UCC (classified into aggressive (n=430) and non-aggressive (n=413) UCC). No association was found between total flavonoid intake and bladder cancer risk. Among flavonoid subclasses, significant inverse associations with bladder cancer risk were found for intakes of flavonol (hazard ratio comparing fifth with first quintile (HRQ5–Q1) 0.74, 95% confidence interval (CI): 0.61–0.91; P-trend=0.009) and lignans (HRQ5–Q1 0.78, 95% CI: 0.62–0.96; P-trend=0.046). Similar results were observed for overall UCC and aggressive UCC, but not for non-aggressive UCC. Conclusions: Our study suggests an inverse association between the dietary intakes of flavonols and lignans and risk of bladder cancer, particularly aggressive UCC. PMID:25121955

  14. Tailoring iron chelation by iron intake and serum ferritin: the prospective EPIC study of deferasirox in 1744 patients with transfusion-dependent anemias

    PubMed Central

    Cappellini, Maria Domenica; Porter, John; El-Beshlawy, Amal; Li, Chi-Kong; Seymour, John F.; Elalfy, Mohsen; Gattermann, Norbert; Giraudier, Stéphane; Lee, Jong-Wook; Chan, Lee Lee; Lin, Kai-Hsin; Rose, Christian; Taher, Ali; Thein, Swee Lay; Viprakasit, Vip; Habr, Dany; Domokos, Gabor; Roubert, Bernard; Kattamis, Antonis

    2010-01-01

    Background Following a clinical evaluation of deferasirox (Exjade®) it was concluded that, in addition to baseline body iron burden, ongoing transfusional iron intake should be considered when selecting doses. The 1-year EPIC study, the largest ever investigation conducted for an iron chelator, is the first to evaluate whether fixed starting doses of deferasirox, based on transfusional iron intake, with dose titration guided by serum ferritin trends and safety markers, provides clinically acceptable chelation in patients (aged ≥2 years) with transfusional hemosiderosis from various types of anemia. Design and Methods The recommended initial dose was 20 mg/kg/day for patients receiving 2–4 packed red blood cell units/month and 10 or 30 mg/kg/day was recommended for patients receiving less or more frequent transfusions, respectively. Dose adjustments were based on 3-month serum ferritin trends and continuous assessment of safety markers. The primary efficacy end-point was change in serum ferritin after 52 weeks compared with baseline. Results The 1744 patients enrolled had the following conditions; thalassemia (n=1115), myelodysplastic syndromes (n=341), aplastic anemia (n=116), sickle cell disease (n=80), rare anemias (n=43) and other transfused anemias (n=49). Overall, there was a significant reduction in serum ferritin from baseline (−264 ng/mL; P<0.0001), reflecting dosage adjustments and ongoing iron intake. The most common (>5%) adverse events were gastrointestinal disturbances (28%) and skin rash (10%). Conclusions Analysis of this large, prospectively collected data set confirms the response to chelation therapy across various anemias, supporting initial deferasirox doses based on transfusional iron intake, with subsequent dose titration guided by trends in serum ferritin and safety markers (clinicaltrials.gov identifier: NCT00171821). PMID:19951979

  15. Coffee and tea consumption, genotype-based CYP1A2 and NAT2 activity and colorectal cancer risk-results from the EPIC cohort study.

    PubMed

    Dik, Vincent K; Bueno-de-Mesquita, H B As; Van Oijen, Martijn G H; Siersema, Peter D; Uiterwaal, Cuno S P M; Van Gils, Carla H; Van Duijnhoven, Fränzel J B; Cauchi, Stéphane; Yengo, Loic; Froguel, Philippe; Overvad, Kim; Bech, Bodil H; Tjønneland, Anne; Olsen, Anja; Boutron-Ruault, Marie-Christine; Racine, Antoine; Fagherazzi, Guy; Kühn, Tilman; Campa, Daniele; Boeing, Heiner; Aleksandrova, Krasimira; Trichopoulou, Antonia; Peppa, Eleni; Oikonomou, Eleni; Palli, Domenico; Grioni, Sara; Vineis, Paolo; Tumino, Rosaria; Panico, Salvatore; Peeters, Petra H M; Weiderpass, Elisabete; Engeset, Dagrun; Braaten, Tonje; Dorronsoro, Miren; Chirlaque, María-Dolores; Sánchez, María-José; Barricarte, Aurelio; Zamora-Ros, Raul; Argüelles, Marcial; Jirström, Karin; Wallström, Peter; Nilsson, Lena M; Ljuslinder, Ingrid; Travis, Ruth C; Khaw, Kay-Tee; Wareham, Nick; Freisling, Heinz; Licaj, Idlir; Jenab, Mazda; Gunter, Marc J; Murphy, Neil; Romaguera-Bosch, Dora; Riboli, Elio

    2014-07-15

    Coffee and tea contain numerous antimutagenic and antioxidant components and high levels of caffeine that may protect against colorectal cancer (CRC). We investigated the association between coffee and tea consumption and CRC risk and studied potential effect modification by CYP1A2 and NAT2 genotypes, enzymes involved in the metabolization of caffeine. Data from 477,071 participants (70.2% female) of the European Investigation into Cancer and Nutrition (EPIC) cohort study were analyzed. At baseline (1992-2000) habitual (total, caffeinated and decaffeinated) coffee and tea consumption was assessed with dietary questionnaires. Cox proportional hazards models were used to estimate adjusted hazard ratio's (HR) and 95% confidence intervals (95% CI). Potential effect modification by genotype-based CYP1A2 and NAT2 activity was studied in a nested case-control set of 1,252 cases and 2,175 controls. After a median follow-up of 11.6 years, 4,234 participants developed CRC (mean age 64.7 ± 8.3 years). Total coffee consumption (high vs. non/low) was not associated with CRC risk (HR 1.06, 95% CI 0.95-1.18) or subsite cancers, and no significant associations were found for caffeinated (HR 1.10, 95% CI 0.97-1.26) and decaffeinated coffee (HR 0.96, 95% CI 0.84-1.11) and tea (HR 0.97, 95% CI 0.86-1.09). High coffee and tea consuming subjects with slow CYP1A2 or NAT2 activity had a similar CRC risk compared to non/low coffee and tea consuming subjects with a fast CYP1A2 or NAT2 activity, which suggests that caffeine metabolism does not affect the link between coffee and tea consumption and CRC risk. This study shows that coffee and tea consumption is not likely to be associated with overall CRC. PMID:24318358

  16. Topical Beta-Blockers and Cardiovascular Mortality: Systematic Review and Meta-Analysis with Data from the EPIC-Norfolk Cohort Study

    PubMed Central

    Pinnock, Claude; Yip, Jennifer L. Y.; Khawaja, Anthony P.; Luben, Robert; Hayat, Shabina; Broadway, David C.; Foster, Paul J.; Khaw, Kay-Tee; Wareham, Nick

    2016-01-01

    ABSTRACT Purpose: To determine if topical beta-blocker use is associated with increased cardiovascular mortality, particularly among people with self-reported glaucoma. Methods: All participants who participated in the first health check (N = 25,639) of the European Prospective Investigation into Cancer (EPIC) Norfolk cohort (1993–2013) were included in this prospective cohort study, with a median follow-up of 17.0 years. We determined use of topical beta-blockers at baseline through a self-reported questionnaire and prescription check at the first clinical visit. Cardiovascular mortality was ascertained through data linkage with the Office for National Statistics mortality database. Hazard ratios (HRs) were estimated using multivariable Cox regression models. Meta-analysis of the present study’s results together with other identified literature was performed using a random effects model. Results: We did not find an association between the use of topical beta-blockers and cardiovascular mortality (HR 0.93, 95% confidence interval, CI, 0.67–1.30). In the 514 participants with self-reported glaucoma, no association was found between the use of topical beta-blockers and cardiovascular mortality (HR 0.89, 95% CI 0.56–1.40). In the primary meta-analysis of four publications, there was no evidence of an association between the use of topical beta-blockers and cardiovascular mortality (pooled HR estimate 1.10, 95% CI 0.84–1.36). Conclusion: Topical beta-blockers do not appear to be associated with excess cardiovascular mortality. This evidence does not indicate that a change in current practice is warranted, although clinicians should continue to assess individual patients and their cardiovascular risk prior to commencing topical beta-blockers. PMID:27551956

  17. Consumption and portion sizes of tree nuts, peanuts and seeds in the European Prospective Investigation into Cancer and Nutrition (EPIC) cohorts from 10 European countries.

    PubMed

    Jenab, Mazda; Sabaté, Joan; Slimani, Nadia; Ferrari, Pietro; Mazuir, Mathieu; Casagrande, Corinne; Deharveng, Genevieve; Tjønneland, Anne; Olsen, Anja; Overvad, Kim; Boutron-Ruault, Marie-Christine; Clavel-Chapelon, Françoise; Boeing, Heiner; Weikert, Cornelia; Linseisen, Jakob; Rohrmann, Sabine; Trichopoulou, Antonia; Naska, Androniki; Palli, Domenico; Sacerdote, Carlotta; Tumino, Rosario; Mattiello, Amalia; Pala, Valeria; Bueno-de-Mesquita, H Bas; Ocké, Marga C; Peeters, Petra H; Engeset, Dagrun; Skeie, Gurie; Jakszyn, Paula; Ardanaz, Eva; Quirós, J Ramón; Chirlaque, Maria Dolores; Martinez, Carmen; Amiano, Pilar; Berglund, Goran; Palmqvist, Richard; van Guelpen, Bethany; Bingham, Sheila; Key, Timothy; Riboli, Elio

    2006-11-01

    Tree nuts, peanuts and seeds are nutrient dense foods whose intake has been shown to be associated with reduced risk of some chronic diseases. They are regularly consumed in European diets either as whole, in spreads or from hidden sources (e.g. commercial products). However, little is known about their intake profiles or differences in consumption between European countries or geographic regions. The objective of this study was to analyse the population mean intake and average portion sizes in subjects reporting intake of nuts and seeds consumed as whole, derived from hidden sources or from spreads. Data was obtained from standardised 24-hour dietary recalls collected from 36 994 subjects in 10 different countries that are part of the European Prospective Investigation into Cancer and Nutrition (EPIC). Overall, for nuts and seeds consumed as whole, the percentage of subjects reporting intake on the day of the recall was: tree nuts = 4. 4%, peanuts = 2.3 % and seeds = 1.3 %. The data show a clear northern (Sweden: mean intake = 0.15 g/d, average portion size = 15.1 g/d) to southern (Spain: mean intake = 2.99 g/d, average portion size = 34.7 g/d) European gradient of whole tree nut intake. The three most popular tree nuts were walnuts, almonds and hazelnuts, respectively. In general, tree nuts were more widely consumed than peanuts or seeds. In subjects reporting intake, men consumed a significantly higher average portion size of tree nuts (28.5 v. 23.1 g/d, P<0.01) and peanuts (46.1 v. 35.1 g/d, P<0.01) per day than women. These data may be useful in devising research initiatives and health policy strategies based on the intake of this food group. PMID:17125528

  18. Reducing our environmental footprint and improving our health: greenhouse gas emission and land use of usual diet and mortality in EPIC-NL: a prospective cohort study

    PubMed Central

    2014-01-01

    Background Food choices influence health status, but also have a great impact on the environment. The production of animal-derived foods has a high environmental burden, whereas the burden of refined carbohydrates, vegetables and fruit is low. The aim of this study was to investigate the associations of greenhouse gas emission (GHGE) and land use of usual diet with mortality risk, and to estimate the effect of a modelled meat substitution scenario on health and the environment. Methods The usual diet of 40011 subjects in the EPIC-NL cohort was assessed using a food frequency questionnaire. GHGE and land use of food products were based on life cycle analysis. Cox proportional hazard ratios (HR) were calculated to determine relative mortality risk. In the modelled meat-substitution scenario, one-third (35 gram) of the usual daily meat intake (105 gram) was substituted by other foods. Results During a follow-up of 15.9 years, 2563 deaths were registered. GHGE and land use of the usual diet were not associated with all-cause or with cause-specific mortality. Highest vs. lowest quartile of GHGE and land use adjusted hazard ratios for all-cause mortality were respectively 1.00 (95% CI: 0.86-1.17) and 1.05 (95% CI: 0.89-1.23). Modelled substitution of 35 g/d of meat with vegetables, fruit-nuts-seeds, pasta-rice-couscous, or fish significantly increased survival rates (6-19%), reduced GHGE (4-11%), and land use (10-12%). Conclusions There were no significant associations observed between dietary-derived GHGE and land use and mortality in this Dutch cohort. However, the scenario-study showed that substitution of meat with other major food groups was associated with a lower mortality risk and a reduced environmental burden. Especially when vegetables, fruit-nuts-seeds, fish, or pasta-rice-couscous replaced meat. PMID:24708803

  19. Dietary vitamin D intake and risk of type 2 diabetes in the European Prospective Investigation into Cancer and Nutrition – the EPIC-InterAct study

    PubMed Central

    Abbas, Sascha; Linseisen, Jakob; Rohrmann, Sabine; Beulens, Joline WJ; Buijsse, Brian; Amiano, Pilar; Ardanaz, Eva; Balkau, Beverley; Boeing, Heiner; Clavel-Chapelon, Françoise; Fagherazzi, Guy; Franks, Paul W; Gavrila, Diana; Grioni, Sara; Kaaks, Rudolf; Key, Timothy J; Khaw, Kay Tee; Masters, Tilman Kühn; Mattiello, Amalia; Molina-Montes, Esther; Nilsson, Peter M; Overvad, Kim; Quirós, J. Ramón; Rolandsson, Olov; Sacerdote, Carlotta; Saieva, Calogero; Slimani, Nadia; Sluijs, Ivonne; Spijkerman, Annemieke MW; Tjonneland, Anne; Tumino, Rosario; van der A, Daphne L; Zamora-Ros, Raul; Sharp, Stephen J; Langenberg, Claudia; Forouhi, Nita G; Riboli, Elio; Wareham, Nicholas J

    2014-01-01

    Background Prospective cohort studies have indicated that serum vitamin D levels are inversely related to risk of type 2 diabetes. However, such studies cannot determine the source of vitamin D. Therefore, we examined the association of dietary vitamin D intake with incident type 2 diabetes within the European Prospective Investigation into Cancer and Nutrition (EPIC)-InterAct study in a heterogeneous European population including 8 countries with large geographical variation. Methods Using a case-cohort design, 11,245 incident cases of type 2 diabetes and a representative subcohort (N=15,798) were included in the analyses. Hazard ratios (HR) and 95% confidence intervals (CIs) for type 2 diabetes were calculated using a Prentice-weighted Cox regression adjusted for potential confounders. 24-h diet recall data from a subsample (N=2347) were used to calibrate habitual intake data derived from dietary questionnaires. Results Median follow-up time was 10.8 years. Dietary vitamin D intake was not significantly associated with the risk of type 2 diabetes. HR and 95 % CIs for the highest compared to the lowest quintile of uncalibrated vitamin D intake was 1.09 (0.97-1.22), (ptrend=0.17). No associations were observed in a sex-specific analysis. The overall pooled effect [HR (95% CI)] using the continuous calibrated variable was 1.00 (0.97-1.03) per increase of 1 μg/day dietary vitamin D. Conclusion This observational study does not support an association between higher dietary vitamin D intake and type-2 diabetes incidence. This result has to be interpreted in light of the limited contribution of dietary vitamin D on the overall vitamin D status of a person. PMID:24253760

  20. Endogenous versus exogenous exposure to N-nitroso compounds and gastric cancer risk in the European Prospective Investigation into Cancer and Nutrition (EPIC-EURGAST) study.

    PubMed

    Jakszyn, Paula; Bingham, Sheila; Pera, Guillem; Agudo, Antonio; Luben, Robert; Welch, Ailsa; Boeing, Heiner; Del Giudice, Giuseppe; Palli, Domenico; Saieva, Calogero; Krogh, Vittorio; Sacerdote, Carlotta; Tumino, Rosario; Panico, Salvatore; Berglund, Göran; Simán, Henrik; Hallmans, Göran; Sanchez, María José; Larrañaga, Nerea; Barricarte, Aurelio; Chirlaque, María Dolores; Quirós, José R; Key, Timothy J; Allen, Naomi; Lund, Eiliv; Carneiro, Fátima; Linseisen, Jakob; Nagel, Gabriele; Overvad, Kim; Tjonneland, Anne; Olsen, Anja; Bueno-de-Mesquita, H Bas; Ocké, Marga O; Peeters, Petra Hm; Numans, Mattijs E; Clavel-Chapelon, Françoise; Trichopoulou, Antonia; Fenger, Claus; Stenling, Roger; Ferrari, Pietro; Jenab, Mazda; Norat, Teresa; Riboli, Elio; Gonzalez, Carlos A

    2006-07-01

    The risk of gastric cancer (GC) associated with dietary intake of nitrosodimethylamine (NDMA) and endogenous formation of nitroso compounds (NOCs) was investigated in the European Prospective Investigation into Cancer and Nutrition (EPIC). The study included 521,457 individuals and 314 incident cases of GC that had occurred after 6.6 average years of follow-up. An index of endogenous NOC (ENOC) formation was estimated using data of the iron content from meat intake and faecal apparent total NOC formation according to previous published studies. Antibodies to Helicobacter pylori and vitamin C levels were measured in a sub-sample of cases and matched controls included in a nested case-control within the cohort. Exposure to NDMA was < 1 microg on average compared with 93 mug on average from ENOC. There was no association between NDMA intake and GC risk (HR, 1.00; 95% CI, 0.7-1.43). ENOC was significantly associated with non-cardia cancer risk (HR, 1.42; 95% CI, 1.14-1.78 for an increase of 40 microg/day) but not with cardia cancer (HR, 0.96; 95% CI, 0.69-1.33). Although the number of not infected cases is low, our data suggest a possible interaction between ENOC and H.pylori infection (P for interaction = 0.09). Moreover, we observed an interaction between plasma vitamin C and ENOC (P < 0.02). ENOC formation may account for our previously reported association between red and processed meat consumption and gastric cancer risk. PMID:16571648

  1. Marital transitions and associated changes in fruit and vegetable intake: Findings from the population-based prospective EPIC-Norfolk cohort, UK

    PubMed Central

    Vinther, Johan L.; Conklin, Annalijn I.; Wareham, Nicholas J.; Monsivais, Pablo

    2016-01-01

    Background Diet is critical to health and social relationships are an important determinant of diet. We report the association between transitions in marital status and healthy eating behaviours in a UK population. Methods Longitudinal study of middle-age and older adults 39−78y (n = 11 577) in EPIC-Norfolk, a population-based cohort, who completed food frequency questionnaires in 1993–97 and 1998–2002. Multivariable linear regression analyses assessed gender-specific associations between five categories of marital transitions and changes in quantity (g/d), and variety (no/month) of fruits or vegetables. Results In 3.6 years of follow-up and relative to men who stayed married, widowed men showed significant declines (mean difference, 95% CI) in all four indicators of healthy eating including fruit quantity (−47.7, −80.6 to −14.9 g/d), fruit variety (−0.6, −1.1 to −0.2 no/month), vegetable quantity (−27.7, −50.5 to −4.9 g/d), and vegetable variety (−1.6, −2.2 to −0.9 no/month). Men who were separated or divorced or who remained single also showed significant declines in three of the indicators. Among women, only those who became separated/divorced or stayed single showed declines in one indicator, vegetable variety. Conclusion Unhealthy changes to diet accompanying divorce, separation and becoming widowed may be more common among men than women. Moreover, deterioration in fruit and vegetable intakes was more apparent for variety rather than quantity consumed. Programmes to promote healthy eating among older adults need to recognise these social determinants of diet and consider prioritising people who live alone and in particular men who have recently left relationships or who have been widowed. PMID:27082023

  2. The Influence of Hormonal Factors on the Risk of Developing Cervical Cancer and Pre-Cancer: Results from the EPIC Cohort

    PubMed Central

    Roura, Esther; Travier, Noémie; Waterboer, Tim; de Sanjosé, Silvia; Bosch, F. Xavier; Pawlita, Michael; Pala, Valeria; Weiderpass, Elisabete; Margall, Núria; Dillner, Joakim; Gram, Inger T.; Tjønneland, Anne; Munk, Christian; Palli, Domenico; Khaw, Kay-Tee; Overvad, Kim; Clavel-Chapelon, Françoise; Mesrine, Sylvie; Fournier, Agnès; Fortner, Renée T.; Ose, Jennifer; Steffen, Annika; Trichopoulou, Antonia; Lagiou, Pagona; Orfanos, Philippos; Masala, Giovanna; Tumino, Rosario; Sacerdote, Carlotta; Polidoro, Silvia; Mattiello, Amalia; Lund, Eiliv; Peeters, Petra H.; Bueno-de-Mesquita, H. B(as).; Quirós, J. Ramón; Sánchez, María-José; Navarro, Carmen; Barricarte, Aurelio; Larrañaga, Nerea; Ekström, Johanna; Lindquist, David; Idahl, Annika; Travis, Ruth C.; Merritt, Melissa A.; Gunter, Marc J.; Rinaldi, Sabina; Tommasino, Massimo; Franceschi, Silvia; Riboli, Elio; Castellsagué, Xavier

    2016-01-01

    Background In addition to HPV, high parity and hormonal contraceptives have been associated with cervical cancer (CC). However, most of the evidence comes from retrospective case-control studies. The aim of this study is to prospectively evaluate associations between hormonal factors and risk of developing cervical intraepithelial neoplasia grade 3 (CIN3)/carcinoma in situ (CIS) and invasive cervical cancer (ICC). Methods and Findings We followed a cohort of 308,036 women recruited in the European Prospective Investigation into Cancer and Nutrition (EPIC) Study. At enrollment, participants completed a questionnaire and provided serum. After a 9-year median follow-up, 261 ICC and 804 CIN3/CIS cases were reported. In a nested case-control study, the sera from 609 cases and 1,218 matched controls were tested for L1 antibodies against HPV types 11,16,18,31,33,35,45,52,58, and antibodies against Chlamydia trachomatis and Human herpesvirus 2. Multivariate analyses were performed to estimate hazard ratios (HR), odds ratios (OR) and corresponding 95% confidence intervals (CI). The cohort analysis showed that number of full-term pregnancies was positively associated with CIN3/CIS risk (p-trend = 0.03). Duration of oral contraceptives use was associated with a significantly increased risk of both CIN3/CIS and ICC (HR = 1.6 and HR = 1.8 respectively for ≥15 years versus never use). Ever use of menopausal hormone therapy was associated with a reduced risk of ICC (HR = 0.5, 95%CI: 0.4–0.8). A non-significant reduced risk of ICC with ever use of intrauterine devices (IUD) was found in the nested case-control analysis (OR = 0.6). Analyses restricted to all cases and HPV seropositive controls yielded similar results, revealing a significant inverse association with IUD for combined CIN3/CIS and ICC (OR = 0.7). Conclusions Even though HPV is the necessary cause of CC, our results suggest that several hormonal factors are risk factors for cervical carcinogenesis. Adherence to

  3. Use of evidence based practices to improve survival without severe morbidity for very preterm infants: results from the EPICE population based cohort

    PubMed Central

    Manktelow, Bradley N; Piedvache, Aurelie; Cuttini, Marina; Boyle, Elaine; van Heijst, Arno; Gadzinowski, Janusz; Van Reempts, Patrick; Huusom, Lene; Weber, Tom; Schmidt, Stephan; Barros, Henrique; Dillalo, Dominico; Toome, Liis; Norman, Mikael; Blondel, Beatrice; Bonet, Mercedes; Draper, Elisabeth S; Maier, Rolf F

    2016-01-01

    Objectives To evaluate the implementation of four high evidence practices for the care of very preterm infants to assess their use and impact in routine clinical practice and whether they constitute a driver for reducing mortality and neonatal morbidity. Design Prospective multinational population based observational study. Setting 19 regions from 11 European countries covering 850 000 annual births participating in the EPICE (Effective Perinatal Intensive Care in Europe for very preterm births) project. Participants 7336 infants born between 24+0 and 31+6 weeks’ gestation in 2011/12 without serious congenital anomalies and surviving to neonatal admission. Main outcome measures Combined use of four evidence based practices for infants born before 28 weeks’ gestation using an “all or none” approach: delivery in a maternity unit with appropriate level of neonatal care; administration of antenatal corticosteroids; prevention of hypothermia (temperature on admission to neonatal unit ≥36°C); surfactant used within two hours of birth or early nasal continuous positive airway pressure. Infant outcomes were in-hospital mortality, severe neonatal morbidity at discharge, and a composite measure of death or severe morbidity, or both. We modelled associations using risk ratios, with propensity score weighting to account for potential confounding bias. Analyses were adjusted for clustering within delivery hospital. Results Only 58.3% (n=4275) of infants received all evidence based practices for which they were eligible. Infants with low gestational age, growth restriction, low Apgar scores, and who were born on the day of maternal admission to hospital were less likely to receive evidence based care. After adjustment, evidence based care was associated with lower in-hospital mortality (risk ratio 0.72, 95% confidence interval 0.60 to 0.87) and in-hospital mortality or severe morbidity, or both (0.82, 0.73 to 0.92), corresponding to an estimated 18% decrease

  4. A statistical framework to model the meeting-in-the-middle principle using metabolomic data: application to hepatocellular carcinoma in the EPIC study.

    PubMed

    Assi, Nada; Fages, Anne; Vineis, Paolo; Chadeau-Hyam, Marc; Stepien, Magdalena; Duarte-Salles, Talita; Byrnes, Graham; Boumaza, Houda; Knüppel, Sven; Kühn, Tilman; Palli, Domenico; Bamia, Christina; Boshuizen, Hendriek; Bonet, Catalina; Overvad, Kim; Johansson, Mattias; Travis, Ruth; Gunter, Marc J; Lund, Eiliv; Dossus, Laure; Elena-Herrmann, Bénédicte; Riboli, Elio; Jenab, Mazda; Viallon, Vivian; Ferrari, Pietro

    2015-11-01

    Metabolomics is a potentially powerful tool for identification of biomarkers associated with lifestyle exposures and risk of various diseases. This is the rationale of the 'meeting-in-the-middle' concept, for which an analytical framework was developed in this study. In a nested case-control study on hepatocellular carcinoma (HCC) within the European Prospective Investigation into Cancer and nutrition (EPIC), serum (1)H nuclear magnetic resonance (NMR) spectra (800 MHz) were acquired for 114 cases and 222 matched controls. Through partial least square (PLS) analysis, 21 lifestyle variables (the 'predictors', including information on diet, anthropometry and clinical characteristics) were linked to a set of 285 metabolic variables (the 'responses'). The three resulting scores were related to HCC risk by means of conditional logistic regressions. The first PLS factor was not associated with HCC risk. The second PLS metabolomic factor was positively associated with tyrosine and glucose, and was related to a significantly increased HCC risk with OR = 1.11 (95% CI: 1.02, 1.22, P = 0.02) for a 1SD change in the responses score, and a similar association was found for the corresponding lifestyle component of the factor. The third PLS lifestyle factor was associated with lifetime alcohol consumption, hepatitis and smoking, and had negative loadings on vegetables intake. Its metabolomic counterpart displayed positive loadings on ethanol, glutamate and phenylalanine. These factors were positively and statistically significantly associated with HCC risk, with 1.37 (1.05, 1.79, P = 0.02) and 1.22 (1.04, 1.44, P = 0.01), respectively. Evidence of mediation was found in both the second and third PLS factors, where the metabolomic signals mediated the relation between the lifestyle component and HCC outcome. This study devised a way to bridge lifestyle variables to HCC risk through NMR metabolomics data. This implementation of the 'meeting-in-the-middle' approach finds natural

  5. Serum carbon and nitrogen stable isotopes as potential biomarkers of dietary intake and their relation with incident type 2 diabetes: the EPIC-Norfolk study123

    PubMed Central

    Patel, Pinal S; Cooper, Andrew JM; O'Connell, Tamsin C; Kuhnle, Gunter GC; Kneale, Catherine K; Mulligan, Angela M; Luben, Robert N; Brage, Soren; Khaw, Kay-Tee; Wareham, Nicholas J; Forouhi, Nita G

    2014-01-01

    Background: Stable-isotope ratios of carbon (13C/12C, expressed as δ13C) and nitrogen (15N/14N, or δ15N) have been proposed as potential nutritional biomarkers to distinguish between meat, fish, and plant-based foods. Objective: The objective was to investigate dietary correlates of δ13C and δ15N and examine the association of these biomarkers with incident type 2 diabetes in a prospective study. Design: Serum δ13C and δ15N (‰) were measured by using isotope ratio mass spectrometry in a case-cohort study (n = 476 diabetes cases; n = 718 subcohort) nested within the European Prospective Investigation into Cancer and Nutrition (EPIC)–Norfolk population-based cohort. We examined dietary (food-frequency questionnaire) correlates of δ13C and δ15N in the subcohort. HRs and 95% CIs were estimated by using Prentice-weighted Cox regression. Results: Mean (±SD) δ13C and δ15N were −22.8 ± 0.4‰ and 10.2 ± 0.4‰, respectively, and δ13C (r = 0.22) and δ15N (r = 0.20) were positively correlated (P < 0.001) with fish protein intake. Animal protein was not correlated with δ13C but was significantly correlated with δ15N (dairy protein: r = 0.11; meat protein: r = 0.09; terrestrial animal protein: r = 0.12, P ≤ 0.013). δ13C was inversely associated with diabetes in adjusted analyses (HR per tertile: 0.74; 95% CI: 0.65, 0.83; P-trend < 0.001], whereas δ15N was positively associated (HR: 1.23; 95% CI: 1.09, 1.38; P-trend = 0.001). Conclusions: The isotope ratios δ13C and δ15N may both serve as potential biomarkers of fish protein intake, whereas only δ15N may reflect broader animal-source protein intake in a European population. The inverse association of δ13C but a positive association of δ15N with incident diabetes should be interpreted in the light of knowledge of dietary intake and may assist in identifying dietary components that are associated with health risks and benefits. PMID:24990425

  6. Biomarker patterns of inflammatory and metabolic pathways are associated with risk of colorectal cancer: results from the European Prospective Investigation into Cancer and Nutrition (EPIC).

    PubMed

    Aleksandrova, Krasimira; Jenab, Mazda; Bueno-de-Mesquita, H Bas; Fedirko, Veronika; Kaaks, Rudolf; Lukanova, Annekatrin; van Duijnhoven, Fränzel J B; Jansen, Eugene; Rinaldi, Sabina; Romieu, Isabelle; Ferrari, Pietro; Murphy, Neil; Gunter, Marc J; Riboli, Elio; Westhpal, Sabine; Overvad, Kim; Tjønneland, Anne; Halkjær, Jytte; Boutron-Ruault, Marie-Christine; Dossus, Laure; Racine, Antoine; Trichopoulou, Antonia; Bamia, Christina; Orfanos, Philippos; Agnoli, Claudia; Palli, Domenico; Panico, Salvatore; Tumino, Rosario; Vineis, Paolo; Peeters, Petra H; Duell, Eric J; Molina-Montes, Esther; Quirós, J Ramón; Dorronsoro, Miren; Chirlaque, Maria-Dolores; Barricarte, Aurelio; Ljuslinder, Ingrid; Palmqvist, Richard; Travis, Ruth C; Khaw, Kay-Tee; Wareham, Nicholas; Pischon, Tobias; Boeing, Heiner

    2014-04-01

    A number of biomarkers of inflammatory and metabolic pathways are individually related to higher risk of colorectal cancer (CRC); however, the association between biomarker patterns and CRC incidence has not been previously evaluated. Our study investigates the association of biomarker patterns with CRC in a prospective nested case-control study within the European Prospective Investigation into Cancer and Nutrition (EPIC). During median follow-up time of 7.0 (3.7-9.4) years, 1,260 incident CRC cases occurred and were matched to 1,260 controls using risk-set sampling. Pre-diagnostic measurements of C-peptide, glycated hemoglobin, triglycerides (TG), high-density lipoprotein cholesterol (HDL-C), C-reactive protein (CRP), reactive oxygen metabolites (ROM), insulin-like growth factor 1, adiponectin, leptin and soluble leptin receptor (sOB-R) were used to derive biomarker patterns from principal component analysis (PCA). The relation with CRC incidence was assessed using conditional logistic regression models. We identified four biomarker patterns 'HDL-C/Adiponectin fractions', 'ROM/CRP', 'TG/C-peptide' and 'leptin/sOB-R' to explain 60 % of the overall biomarker variance. In multivariable-adjusted logistic regression, the 'HDL-C/Adiponectin fractions', 'ROM/CRP' and 'leptin/sOB-R' patterns were associated with CRC risk [for the highest quartile vs the lowest, incidence rate ratio (IRR) = 0.69, 95 % CI 0.51-0.93, P-trend = 0.01; IRR = 1.70, 95 % CI 1.30-2.23, P-trend = 0.002; and IRR = 0.79, 95 % CI 0.58-1.07; P-trend = 0.05, respectively]. In contrast, the 'TG/C-peptide' pattern was not associated with CRC risk (IRR = 0.75, 95 % CI 0.56-1.00, P-trend = 0.24). After cases within the first 2 follow-up years were excluded, the 'ROM/CRP' pattern was no longer associated with CRC risk, suggesting potential influence of preclinical disease on these associations. By application of PCA, the study identified 'HDL-C/Adiponectin fractions', 'ROM/CRP' and 'leptin/sOB-R' as

  7. Reading the Epic of Gilgamesh

    ERIC Educational Resources Information Center

    Empson, William

    1976-01-01

    Author commented on the textbook editions of this extremely ancient narrative about a hero who wanted to conquer death. He remarked on the difficulties in the text, differences between the 1964 and 1972 Sandars versions, similarities to Shelley, various literary strategies, and the persistent problem of translation itself. (Editor/RK)

  8. [Amazing epic of blood transfusion...].

    PubMed

    Desiron, Q

    2000-01-01

    On the occasion of the 100th anniversary of the discovery of blood groups by Karl Landsteiner, the author makes a historical note on the amazing history of the blood transfusion from the origin to the beginning of the XXth century.

  9. ENVIRONMENTAL PHOTOGRAPHIC INTERPRETATION CENTER (EPIC)

    EPA Science Inventory

    The Environmental Sciences Division (ESD) in the National Exposure Research Laboratory (NERL) of the Office of Research and Development provides remote sensing technical support including aerial photograph acquisition and interpretation to the EPA Program Offices, ORD Laboratorie...

  10. A Nested Case–Control Study of Metabolically Defined Body Size Phenotypes and Risk of Colorectal Cancer in the European Prospective Investigation into Cancer and Nutrition (EPIC)

    PubMed Central

    Murphy, Neil; Cross, Amanda J.; Abubakar, Mustapha; Jenab, Mazda; Aleksandrova, Krasimira; Boutron-Ruault, Marie-Christine; Dossus, Laure; Racine, Antoine; Kühn, Tilman; Katzke, Verena A.; Tjønneland, Anne; Petersen, Kristina E. N.; Overvad, Kim; Quirós, J. Ramón; Jakszyn, Paula; Molina-Montes, Esther; Dorronsoro, Miren; Huerta, José-María; Barricarte, Aurelio; Khaw, Kay-Tee; Wareham, Nick; Travis, Ruth C.; Trichopoulou, Antonia; Lagiou, Pagona; Trichopoulos, Dimitrios; Masala, Giovanna; Krogh, Vittorio; Tumino, Rosario; Vineis, Paolo; Panico, Salvatore; Bueno-de-Mesquita, H. Bas; Siersema, Peter D.; Peeters, Petra H.; Ohlsson, Bodil; Ericson, Ulrika; Palmqvist, Richard; Nyström, Hanna; Weiderpass, Elisabete; Skeie, Guri; Freisling, Heinz; Kong, So Yeon; Tsilidis, Kostas; Muller, David C.; Riboli, Elio; Gunter, Marc J

    2016-01-01

    Background Obesity is positively associated with colorectal cancer. Recently, body size subtypes categorised by the prevalence of hyperinsulinaemia have been defined, and metabolically healthy overweight/obese individuals (without hyperinsulinaemia) have been suggested to be at lower risk of cardiovascular disease than their metabolically unhealthy (hyperinsulinaemic) overweight/obese counterparts. Whether similarly variable relationships exist for metabolically defined body size phenotypes and colorectal cancer risk is unknown. Methods and Findings The association of metabolically defined body size phenotypes with colorectal cancer was investigated in a case–control study nested within the European Prospective Investigation into Cancer and Nutrition (EPIC) study. Metabolic health/body size phenotypes were defined according to hyperinsulinaemia status using serum concentrations of C-peptide, a marker of insulin secretion. A total of 737 incident colorectal cancer cases and 737 matched controls were divided into tertiles based on the distribution of C-peptide concentration amongst the control population, and participants were classified as metabolically healthy if below the first tertile of C-peptide and metabolically unhealthy if above the first tertile. These metabolic health definitions were then combined with body mass index (BMI) measurements to create four metabolic health/body size phenotype categories: (1) metabolically healthy/normal weight (BMI < 25 kg/m2), (2) metabolically healthy/overweight (BMI ≥ 25 kg/m2), (3) metabolically unhealthy/normal weight (BMI < 25 kg/m2), and (4) metabolically unhealthy/overweight (BMI ≥ 25 kg/m2). Additionally, in separate models, waist circumference measurements (using the International Diabetes Federation cut-points [≥80 cm for women and ≥94 cm for men]) were used (instead of BMI) to create the four metabolic health/body size phenotype categories. Statistical tests used in the analysis were all two-sided, and a

  11. Fruit and vegetable intake and the risk of gastric adenocarcinoma: a reanalysis of the European Prospective Investigation into Cancer and Nutrition (EPIC-EURGAST) study after a longer follow-up.

    PubMed

    Gonzalez, Carlos A; Lujan-Barroso, Leila; Bueno-de-Mesquita, H B; Jenab, Mazda; Duell, Eric J; Agudo, Antonio; Tjønneland, Anne; Boutron-Ruault, Marie Christine; Clavel-Chapelon, Françoise; Touillaud, Marina; Teucher, Birgit; Kaaks, Rudolf; Boeing, Heiner; Steffen, Annika; Trichopoulou, Antonia; Roukos, Dimitrios; Karapetyan, Tina; Palli, Domenico; Tagliabue, Giovanna; Mattiello, Amalia; Tumino, Rosario; Ricceri, Fulvio; Siersema, Peter D; Numans, Mattijs E; Peeters, Petra P H; Parr, Christine L; Skeie, Guri; Lund, Eiliv; Quirós, J Ramón; Sánchez-Cantalejo, Emilio; Navarro, Carmen; Barricarte, Aurelio; Dorronsoro, Miren; Ehrnström, Roy; Regner, Sara; Khaw, Kay-Tee; Wareham, Nick; Key, Timothy J; Crowe, Francesca L; Blaker, Hendrik; Romieu, Isabelle; Riboli, Elio

    2012-12-15

    In a previous European prospective investigation into cancer and nutrition (EPIC) analysis, we found an inverse association between total intake of vegetables, onion and garlic, and risk of intestinal gastric cancer (GC) and between citrus fruit and risk of cardia GC. The aim of this study is to reanalyze the effect of fruit and vegetables (F&V), based on a longer follow-up and twice the number of GC cases. Subjects are 477,312 men and women mostly aged 35 to 70 years participating in the EPIC cohort, including 683 gastric adenocarcinomas with 11 years of follow-up. Information on diet and lifestyle was collected at baseline. A calibration study in a subsample was used to correct for dietary measurement errors. When comparing the highest vs. lowest quintile of intake, we found an inverse association between total intake of V&F and GC risk [hazard ratio (HR) 0.77; 95% confidence interval (CI) 0.57-1.04; p for trend 0.02], between fresh fruit and risk of the diffuse type (HR 0.59; 95% CI 0.36-0.97; p for trend 0.03) and an inverse association between citrus fruit and risk of cardia cancer (HR 0.61; 95% CI 0.38-1.00, p for trend 0.01). Although calibration revealed somewhat stronger inverse associations, none of the risks reached statistical significance. There was no association between total or specific vegetables intake and GC risk. The inverse association between fresh fruit and citrus fruits and risk of GC seems to be restricted to smokers and the Northern European countries. Fresh fruit and citrus fruit consumption may protect against diffuse and cardia GC, respectively.

  12. The association between Mediterranean Diet Score and glucokinase regulatory protein gene variation on the markers of cardiometabolic risk: an analysis in the European Prospective Investigation into Cancer (EPIC)-Norfolk study.

    PubMed

    Sotos-Prieto, Mercedes; Luben, Robert; Khaw, Kay-Tee; Wareham, Nicholas J; Forouhi, Nita G

    2014-07-14

    Consumption of a Mediterranean diet (MD) and genetic variation in the glucokinase regulatory protein (GCKR) gene have been reported to be associated with TAG and glucose metabolism. It is uncertain whether there is any interaction between these factors. Therefore, the aims of the present study were to test the association of adherence to a MD and rs780094 (G>A) SNP in the GCKR gene with the markers of cardiometabolic risk, and to investigate the interaction between genetic variation and MD adherence. We studied 20 986 individuals from the European Prospective Investigation into Cancer (EPIC)-Norfolk study. The relative Mediterranean Diet Score (rMED: range 0-18) was used to assess MD adherence. Linear regression was used to estimate the association between the rMED, genotype and cardiometabolic continuous traits, adjusting for potential confounders. In adjusted analyses, we observed independent associations of MD adherence and genotype with cardiometabolic risk, with the highest risk group (AA genotype; lowest rMED) having higher concentrations of TAG, total cholesterol and apoB (12·5, 2·3 and 3·1%, respectively) v. those at the lowest risk (GG genotype; highest rMED). However, the associations of MD adherence with metabolic markers did not differ by genotype, with no significant gene-diet interactions for lipids or for glycated Hb. In conclusion, we found independent associations of the rMED and of the GCKR genotype with cardiometabolic profile, but found no evidence of interaction between them.

  13. Health-Related Quality of Life, Treatment Satisfaction, Adherence and Persistence in β-Thalassemia and Myelodysplastic Syndrome Patients with Iron Overload Receiving Deferasirox: Results from the EPIC Clinical Trial

    PubMed Central

    Porter, John; Bowden, Donald K.; Economou, Marina; Troncy, Jacques; Ganser, Arnold; Habr, Dany; Martin, Nicolas; Gater, Adam; Rofail, Diana; Abetz-Webb, Linda; Lau, Helen; Cappellini, Maria Domenica

    2012-01-01

    Treatment of iron overload using deferoxamine (DFO) is associated with significant deficits in patients' health-related quality of life (HRQOL) and low treatment satisfaction. The current article presents patient-reported HRQOL, satisfaction, adherence, and persistence data from β-thalassemia (n = 274) and myelodysplastic syndrome (MDS) patients (n = 168) patients participating in the Evaluation of Patients' Iron Chelation with Exjade (EPIC) study (NCT00171821); a large-scale 1-year, phase IIIb study investigating the efficacy and safety of the once-daily oral iron chelator, deferasirox. HRQOL and satisfaction, adherence, and persistence to iron chelation therapy (ICT) data were collected at baseline and end of study using the Medical Outcomes Short-Form 36-item Health Survey (SF-36v2) and the Satisfaction with ICT Questionnaire (SICT). Compared to age-matched norms, β-thalassemia and MDS patients reported lower SF-36 domain scores at baseline. Low levels of treatment satisfaction, adherence, and persistence were also observed. HRQOL improved following treatment with deferasirox, particularly among β-thalassemia patients. Furthermore, patients reported high levels of satisfaction with deferasirox at end of study and greater ICT adherence, and persistence. Findings suggest deferasirox improves HRQOL, treatment satisfaction, adherence, and persistence with ICT in β-thalassemia and MDS patients. Improving such outcomes is an important long-term goal for patients with iron overload. PMID:22924125

  14. North-south gradients in plasma concentrations of B-vitamins and other components of one-carbon metabolism in Western Europe: results from the European Prospective Investigation into Cancer and Nutrition (EPIC) Study.

    PubMed

    Eussen, Simone J P M; Nilsen, Roy M; Midttun, Øivind; Hustad, Steinar; IJssennagger, Noortje; Meyer, Klaus; Fredriksen, Åse; Ulvik, Arve; Ueland, Per M; Brennan, Paul; Johansson, Mattias; Bueno-de-Mesquita, Bas; Vineis, Paolo; Chuang, Shu-Chun; Boutron-Ruault, Marie Christine; Dossus, Laure; Perquier, Florence; Overvad, Kim; Teucher, Birgit; Grote, Verena A; Trichopoulou, Antonia; Adarakis, George; Plada, Maria; Sieri, Sabina; Tumino, Rosario; de Magistris, Maria Santucci; Ros, Martine M; Peeters, Petra H M; Redondo, Maria Luisa; Zamora-Ros, Raul; Chirlaque, Maria-Dolores; Ardanaz, Eva; Sonestedt, Emily; Ericson, Ulrika; Schneede, Jörn; van Guelpen, Bethany; Wark, Petra A; Gallo, Valentina; Norat, Teresa; Riboli, Elio; Vollset, Stein Emil

    2013-07-28

    Different lifestyle patterns across Europe may influence plasma concentrations of B-vitamins and one-carbon metabolites and their relation to chronic disease. Comparison of published data on one-carbon metabolites in Western European regions is difficult due to differences in sampling procedures and analytical methods between studies. The present study aimed, to compare plasma concentrations of one-carbon metabolites in Western European regions with one laboratory performing all biochemical analyses. We performed the present study in the European Prospective Investigation into Cancer and Nutrition (EPIC) cohort among 5446 presumptively healthy individuals. Quantile regression was used to compare sex-specific median concentrations between Northern (Denmark and Sweden), Central (France, Germany, The Netherlands and United Kingdom) and Southern (Greece, Spain and Italy) European regions. The lowest folate concentrations were observed in Northern Europe (men, 10·4 nmol/l; women, 10·7 nmol/l) and highest concentrations in Central Europe. Cobalamin concentrations were slightly higher in Northern Europe (men, 330 pmol/l; women, 352 pmol/l) compared with Central and Southern Europe, but did not show a clear north-south gradient. Vitamin B₂ concentrations were highest in Northern Europe (men, 22·2 nmol/l; women, 26·0 nmol/l) and decreased towards Southern Europe (P trend< 0·001). Vitamin B(6) concentrations were highest in Central Europe in men (77·3 nmol/l) and highest in the North among women (70·4 nmol/l), with decreasing concentrations towards Southern Europe in women (P trend< 0·001). In men, concentrations of serine, glycine and sarcosine increased from the north to south. In women, sarcosine increased from Northern to Southern Europe. These findings may provide relevant information for the study of regional differences of chronic disease incidence in association with lifestyle.

  15. EPIC Muon Cooling Simulations using COSY INFINITY

    SciTech Connect

    J.A. Maloney, B. Erdelyi, A. Afanasev, R.P. Johnson, S.A. Bogacz, Y.S. Derbenev, V.S. Morozov

    2011-03-01

    Next gen­er­a­tion mag­net sys­tems need­ed for cool­ing chan­nels in both neu­tri­no fac­to­ries and muon col­lid­ers will be in­no­va­tive and com­pli­cat­ed. De­sign­ing, sim­u­lat­ing and op­ti­miz­ing these sys­tems is a chal­lenge. Using COSY IN­FIN­I­TY, a dif­fer­en­tial al­ge­bra-based code, to sim­u­late com­pli­cat­ed el­e­ments can allow the com­pu­ta­tion and cor­rec­tion of a va­ri­ety of high­er order ef­fects, such as spher­i­cal and chro­mat­ic aber­ra­tions, that are dif­fi­cult to ad­dress with other sim­u­la­tion tools. As an ex­am­ple, a he­li­cal dipole mag­net has been im­ple­ment­ed and sim­u­lat­ed, and the per­for­mance of an epicyclic para­met­ric ion­iza­tion cool­ing sys­tem for muons is stud­ied and com­pared to sim­u­la­tions made using G4Beam­line, a GEAN­T4 toolk­it.

  16. Controlling EPICS from a web browser.

    SciTech Connect

    Evans, K., Jr.

    1999-04-13

    An alternative to using a large graphical display manager like MEDM [1,2] to interface to a control system, is to use individual control objects, such as text boxes, meters, etc., running in a browser. This paper presents three implementations of this concept, one using ActiveX controls, one with Java applets, and another with Microsoft Agent. The ActiveX controls have performance nearing that of MEDM, but they only work on Windows platforms. The Java applets require a server to get around Web security restrictions and are not as fast, but they have the advantage of working on most platforms and with both of the leading Web browsers. The agent works on Windows platforms with and without a browser and allows voice recognition and speech synthesis, making it somewhat more innovative than MEDM.

  17. Satellite Observations of the Epic California Drought

    NASA Astrophysics Data System (ADS)

    Famiglietti, J. S.; Thomas, B. F.; Reager, J. T., II; Castle, S. L.; David, C. H.; Thomas, A. C.; Andreadis, K.; Argus, D. F.; Behrangi, A.; Farr, T.; Fisher, J. B.; Landerer, F. W.; Lo, M. H.; Molotch, N. P.; Painter, T. H.; Rodell, M.; Schimel, D.; Swenson, S. C.; Watkins, M. M.

    2014-12-01

    As California enters its third year of drought, questions of future water sustainability are inevitable. Snowpack, soil moisture, streamflow, reservoir and groundwater levels are at record lows. Mandatory water restrictions are being implemented, statewide fines for wasting water have been authorized, and billions of dollars and tens of thousands of jobs have been lost. Enhanced monitoring and modeling of the state's dwindling water supplies can help manage what remains while looking forward to a post-drought, sustainable water future. Here we demonstrate the role of satellite observations in comprehensive drought characterization and monitoring. In particular we highlight changing water supply, declining groundwater and reservoir levels, agricultural and urban stress. Potential contributions to water management will be discussed.

  18. Bullying Children with Disabilities: A Global Epic

    ERIC Educational Resources Information Center

    Ervin, Dana

    2011-01-01

    Bullying is an issue in all schools, colleges and work places throughout the world. It is in the national news constantly. The media typically reports on bullying and harassment when it involves non-disabled children, mostly high school and college aged students. Very little attention is given to bullying and harassment of children with…

  19. EPICS: Allen-Bradley hardware reference manual

    SciTech Connect

    Nawrocki, G.

    1993-04-05

    This manual covers the following hardware: Allen-Bradley 6008 -- SV VMEbus I/O scanner; Allen-Bradley universal I/O chassis 1771-A1B, -A2B, -A3B, and -A4B; Allen-Bradley power supply module 1771-P4S; Allen-Bradley 1771-ASB remote I/O adapter module; Allen-Bradley 1771-IFE analog input module; Allen-Bradley 1771-OFE analog output module; Allen-Bradley 1771-IG(D) TTL input module; Allen-Bradley 1771-OG(d) TTL output; Allen-Bradley 1771-IQ DC selectable input module; Allen-Bradley 1771-OW contact output module; Allen-Bradley 1771-IBD DC (10--30V) input module; Allen-Bradley 1771-OBD DC (10--60V) output module; Allen-Bradley 1771-IXE thermocouple/millivolt input module; and the Allen-Bradley 2705 RediPANEL push button module.

  20. EPICS release 3.11.6 specific documentation -- Release notes for EPICS 3.11.6

    SciTech Connect

    1994-06-07

    These notes cover the following: (1) directions for switching to production APS release R3.11.6; (2) unbundling of channel access clients; (3) access security; (4) channel access additions; synchronous time support; and (5) description of major differences between R3.11.3 and R3.11.6 Also included is a list of new and/or updated documentation for the program.

  1. Prognostic Indicators as Provided by the EPIC ClearView

    ClinicalTrials.gov

    2011-11-18

    Coronary Artery Disease; Congestive Heart Failure; Valvular Heart Disease; Atrial Fibrillation; Hypertension; Pyelonephritis; Acute Renal Failure; Renal Failure; Viral Hepatitis; Alcoholic Hepatitis; Steatohepatitis; Cirrhosis; Asthma; COPD; Bronchitis; Emphysema; Pneumonia; Inflammatory Bowel Disease; Crohn's Disease; Ulcerative Colitis; Diverticulitis; Peptic Ulcer Disease; Irritable Bowel Syndrome; Cholecystitis; Pancreatitis; Malabsorption Disorders; Celiac Sprue; Diabetes

  2. USEPA EPIC IMPERVIOUS SURFACE RESEARCH IN THE MID-ATLANTIC

    EPA Science Inventory

    Anthropogenic impervious surfaces have an important relationship with non-point source pollution (NPS) in urban watersheds. These human-created surfaces include such features as roads, parking lots, rooftops, sidewalks, and driveways. The amount of impervious surface area in a ...

  3. The Secret of No Face (an Ireokwa Epic).

    ERIC Educational Resources Information Center

    Parker, Everett; Ryan, Kenida (Oledoska)

    An attempt to preserve stories from the oral tradition of the Seneca Indians of the Iroquois tribes is made in this volume. These stories draw on the philosophy and moral teachings of Handsome Lake, a Seneca prophet who was a spiritual leader to his people. The purpose of this English translation of Iroquois legends is to go directly to the…

  4. Marking Time: The Epic Quest to Invent the Perfect Calendar

    NASA Astrophysics Data System (ADS)

    Steel, Duncan

    2000-12-01

    "If you lie awake worrying about the overnight transition from December 31, 1 b.c., to January 1, a.d. 1 (there is no year zero), then you will enjoy Duncan Steel's Marking Time."--American Scientist "No book could serve as a better guide to the cumulative invention that defines the imaginary threshold to the new millennium."--Booklist A Fascinating March through History and the Evolution of the Modern-Day Calendar . . . In this vivid, fast-moving narrative, you'll discover the surprising story of how our modern calendar came about and how it has changed dramatically through the years. Acclaimed author Duncan Steel explores each major step in creating the current calendar along with the many different systems for defining the number of days in a week, the length of a month, and the number of days in a year. From the definition of the lunar month by Meton of Athens in 432 b.c. to the roles played by Julius Caesar, William the Conqueror, and Isaac Newton to present-day proposals to reform our calendar, this entertaining read also presents "timely" tidbits that will take you across the full span of recorded history. Find out how and why comets have been used as clocks, why there is no year zero between 1 b.c. and a.d. 1, and why for centuries Britain and its colonies rang in the New Year on March 25th. Marking Time will leave you with a sense of awe at the haphazard nature of our calendar's development. Once you've read this eye-opening book, you'll never look at the calendar the same way again.

  5. Chandra Reviews Black Hole Musical: Epic But Off-Key

    NASA Astrophysics Data System (ADS)

    2006-10-01

    A gigantic sonic boom generated by a supermassive black hole has been found with NASA's Chandra X-ray Observatory, along with evidence for a cacophony of deep sound. This discovery was made by using data from the longest X-ray observation ever of M87, a nearby giant elliptical galaxy. M87 is centrally located in the Virgo cluster of galaxies and is known to harbor one of the Universe's most massive black holes. Scientists detected loops and rings in the hot, X-ray emitting gas that permeates the cluster and surrounds the galaxy. These loops provide evidence for periodic eruptions that occurred near the supermassive black hole, and that generate changes in pressure, or pressure waves, in the cluster gas that manifested themselves as sound. Chandra Low Energy X-ray Images of M87 Chandra Low Energy X-ray Images of M87 "We can tell that many deep and different sounds have been rumbling through this cluster for most of the lifetime of the Universe," said William Forman of the Harvard-Smithsonian Center for Astrophysics (CfA). The outbursts in M87, which happen every few million years, prevent the huge reservoir of gas in the cluster from cooling and forming many new stars. Without these outbursts and resultant heating, M87 would not be the elliptical galaxy it is today. "If this black hole wasn't making all of this noise, M87 could have been a completely different type of galaxy," said team member Paul Nulsen, also of the CfA, "possibly a huge spiral galaxy about 30 times brighter than the Milky Way." Chandra High Energy X-ray Image of M87 Chandra High Energy X-ray Image of M87 The outbursts result when material falls toward the black hole. While most of the matter is swallowed, some of it was violently ejected in jets. These jets are launched from regions close to the black hole (neither light nor sound can escape from the black hole itself) and push into the cluster's gas, generating cavities and sound which then propagate outwards. Chandra's M87 observations also give the strongest evidence to date of a shock wave produced by the supermassive black hole, a clear sign of a powerful explosion. This shock wave appears as a nearly circular ring of high-energy X-rays that is 85,000 light years in diameter and centered on the black hole. Other remarkable features are seen in M87 for the first time including narrow filaments of X-ray emission -- some over 100,000 light years long -- that may be due hot gas trapped by magnetic fields. Also, a large, previously unknown cavity in the hot gas, created by an outburst from the black hole about 70 million years ago, is seen in the X-ray image. Animation Showing a Supermassive Black Hole Outburst in M87 Animation Showing a Supermassive Black Hole Outburst in M87 "We can explain some of what we see, like the shock wave, with textbook physics," said team member Christine Jones, also of the CfA. "However, other details, like the filaments we find, leave us scratching our heads." Sound has been detected from another black hole in the Perseus cluster, which was calculated to have a note some 57 octaves below middle C. However, the sound in M87 appears to be more discordant and complex. A series of unevenly spaced loops in the hot gas gives evidence for small outbursts from the black hole about every 6 million years. These loops imply the presence of sound waves, not visible in the Chandra image, which are about 56 octaves below middle C. The presence of the large cavity and the sonic boom gives evidence for even deeper notes -- 58 or 59 octaves below middle C -- powered by large outbursts. These new results on M87 were presented at the High-Energy Astrophysics Division meeting being held in San Francisco. NASA's Marshall Space Flight Center, Huntsville, Ala., manages the Chandra program for the agency's Science Mission Directorate. The Smithsonian Astrophysical Observatory controls science and flight operations from the Chandra X-ray Center, Cambridge, Mass. Additional information and images are available at: http://chandra.harvard.edu and http://chandra.nasa.gov

  6. A novel approach to model EPIC variable background

    NASA Astrophysics Data System (ADS)

    Marelli, M.; De Luca, A.; Salvetti, D.; Belfiore, A.; Pizzocaro, D.

    2016-06-01

    In the past years XMM-Newton revolutionized our way to look at the X-ray sky. With more than 200 Ms of exposure, it allowed for numerous discoveries in every field of astronomy. Unfortunately, about 35% of the observing time is badly affected by soft proton flares, with background increasing by orders of magnitudes hampering any classical analysis of field sources. One of the main aim of the EXTraS ("Exploring the X-ray Transient and variable Sky") project is to characterise the variability of XMM-Newton sources within each single observation, including periods of high background. This posed severe challenges. I will describe a novel approach that we implemented within the EXTraS project to produce background-subtracted light curves, that allows to treat the case of very faint sources and very large proton flares. EXTraS light curves will be soon released to the community, together with new tools that will allow the user to reproduce EXTraS results, as well as to extend a similar analysis to future data. Results of this work (including an unprecedented characterisation of the soft proton phenomenon and instrument response) will also serve as a reference for future missions and will be particularly relevant for the Athena observatory.

  7. Manimekalai: The ancient Buddhist Tamil epic, its relevance to psychiatry.

    PubMed

    Somasundaram, Ottilingam; Tejus Murthy, A G

    2016-01-01

    This article refers to materials of psychiatric interest found in the Manimekalai written by the 2(nd) Century CE Buddhist poet Sathanar. From the early description of a wandering psychotic in the streets of Pukar, the ancient maritime capital of the Cholas it is opined that this description fits that of present-day schizophrenia. A drunkard making fun of a Jain monk and a cross-dressed individual are also found in the same streets. Manimekalai's request to the Chola king to convert the prison to a place of piety with Buddhist monks is mentioned. Lord Buddha's teachings on the compassionate way of life are presented. PMID:27385862

  8. Manimekalai: The ancient Buddhist Tamil epic, its relevance to psychiatry

    PubMed Central

    Somasundaram, Ottilingam; Tejus Murthy, A. G.

    2016-01-01

    This article refers to materials of psychiatric interest found in the Manimekalai written by the 2nd Century CE Buddhist poet Sathanar. From the early description of a wandering psychotic in the streets of Pukar, the ancient maritime capital of the Cholas it is opined that this description fits that of present-day schizophrenia. A drunkard making fun of a Jain monk and a cross-dressed individual are also found in the same streets. Manimekalai's request to the Chola king to convert the prison to a place of piety with Buddhist monks is mentioned. Lord Buddha's teachings on the compassionate way of life are presented. PMID:27385862

  9. The Teamwork Sourcebook. EPIC Workplace Learning Project, 1997.

    ERIC Educational Resources Information Center

    Gershwin, Mary Crabbe, Ed.; Cyr, Anne Reis; Smith, Elizabeth Amidon; Travis, Lisa; Wiseman, Tim

    Designed as a reference for teaching teamwork skills in the workplace, this manual presents teaching strategies and activities for beginning, intermediate, and advanced learners. Following an overview of the manual's purpose, definitions are provided of the three skill levels integrated into the activities, indicating that beginning activities…

  10. The Valley Forge Encampment: Epic on the Schuylkill.

    ERIC Educational Resources Information Center

    Trussell, John B. B., Jr.

    Valley Forge, outside Philadelphia (Pennsylvania), has long been recognized as the site of a great victory of the human spirit. Eleven thousand men including Blacks and Indians resided there during the winter of 1777-78 and triumphed over cold, starvation, nakedness, disease, and uncertainty. The encampment site was unprepared for the tattered,…

  11. Epic landslide erosion from mountain roads in Yunnan, China – challenges for sustainable development

    EPA Science Inventory

    Expanding systems of mountain roads in developing countries significantly increase the risk of landslides and sedimentation in streams and rivers, as well as create vulnerabilities for residents and aquatic resources. However, neither government agencies nor external assistance o...

  12. EPIC Studies: Governments Finance, On Average, More Than 50 Percent Of Immunization Expenses, 2010-11.

    PubMed

    Brenzel, Logan; Schütte, Carl; Goguadze, Keti; Valdez, Werner; Le Gargasson, Jean-Bernard; Guthrie, Teresa

    2016-02-01

    Governments in resource-poor settings have traditionally relied on external donor support for immunization. Under the Global Vaccine Action Plan, adopted in 2014, countries have committed to mobilizing additional domestic resources for immunization. Data gaps make it difficult to map how well countries have done in spending government resources on immunization to demonstrate greater ownership of programs. This article presents findings of an innovative approach for financial mapping of routine immunization applied in Benin, Ghana, Honduras, Moldova, Uganda, and Zambia. This approach uses modified System of Health Accounts coding to evaluate data collected from national and subnational levels and from donor agencies. We found that government sources accounted for 27-95 percent of routine immunization financing in 2011, with countries that have higher gross national product per capita better able to finance requirements. Most financing is channeled through government agencies and used at the primary care level. Sustainable immunization programs will depend upon whether governments have the fiscal space to allocate additional resources. Ongoing robust analysis of routine immunization should be instituted within the context of total health expenditure tracking. PMID:26858378

  13. Baseline and lifetime alcohol consumption and risk of differentiated thyroid carcinoma in the EPIC study

    PubMed Central

    Sen, Abhijit; Tsilidis, Konstantinos K; Allen, Naomi E; Rinaldi, Sabina; Appleby, Paul N; Almquist, Martin; Schmidt, Julie A; Dahm, Christina C; Overvad, Kim; Tjønneland, Anne; Rostgaard-Hansen, Agnetha L; Clavel-Chapelon, Françoise; Baglietto, Laura; Boutron-Ruault, Marie-Christine; Kühn, Tilman; Katze, Verena A; Boeing, Heiner; Trichopoulou, Antonia; Tsironis, Christos; Lagiou, Pagona; Palli, Domenico; Pala, Valeria; Panico, Salvatore; Tumino, Rosario; Vineis, Paolo; Bueno-de-Mesquita, HB(as); Peeters, Petra H; Hjartåker, Anette; Lund, Eiliv; Weiderpass, Elisabete; Quirós, J Ramón; Agudo, Antonio; Sánchez, María- José; Arriola, Larraitz; Gavrila, Diana; Gurrea, Aurelio Barricarte; Tosovic, Ada; Hennings, Joakim; Sandström, Maria; Romieu, Isabelle; Ferrari, Pietro; Zamora-Ros, Raul; Khaw, Kay-Tee; Wareham, Nicholas J; Riboli, Elio; Gunter, Marc; Franceschi, Silvia

    2015-01-01

    Background: Results from several cohort and case–control studies suggest a protective association between current alcohol intake and risk of thyroid carcinoma, but the epidemiological evidence is not completely consistent and several questions remain unanswered. Methods: The association between alcohol consumption at recruitment and over the lifetime and risk of differentiated thyroid carcinoma was examined in the European Prospective Investigation into Cancer and Nutrition. Among 477 263 eligible participants (70% women), 556 (90% women) were diagnosed with differentiated thyroid carcinoma over a mean follow-up of 11 years. Hazard ratios (HRs) and 95% confidence intervals (CIs) were estimated using multivariable Cox proportional hazards models. Results: Compared with participants consuming 0.1–4.9 g of alcohol per day at recruitment, participants consuming 15 or more grams (approximately 1–1.5 drinks) had a 23% lower risk of differentiated thyroid carcinoma (HR=0.77; 95% CI=0.60–0.98). These findings did not differ greatly when analyses were conducted for lifetime alcohol consumption, although the risk estimates were attenuated and not statistically significant anymore. Similar results were observed by type of alcoholic beverage, by differentiated thyroid carcinoma histology or according to age, sex, smoking status, body mass index and diabetes. Conclusions: Our study provides some support to the hypothesis that moderate alcohol consumption may be associated with a lower risk of papillary and follicular thyroid carcinomas. PMID:26313664

  14. Modeling Two-Channel Speech Processing With the EPIC Cognitive Architecture.

    PubMed

    Kieras, David E; Wakefield, Gregory H; Thompson, Eric R; Iyer, Nandini; Simpson, Brian D

    2016-01-01

    An important application of cognitive architectures is to provide human performance models that capture psychological mechanisms in a form that can be "programmed" to predict task performance of human-machine system designs. Although many aspects of human performance have been successfully modeled in this approach, accounting for multitalker speech task performance is a novel problem. This article presents a model for performance in a two-talker task that incorporates concepts from psychoacoustics, in particular, masking effects and stream formation. PMID:26748483

  15. Social relationships and healthful dietary behaviour: evidence from over-50s in the EPIC cohort, UK.

    PubMed

    Conklin, Annalijn I; Forouhi, Nita G; Surtees, Paul; Khaw, Kay-Tee; Wareham, Nicholas J; Monsivais, Pablo

    2014-01-01

    Social relationships are an important aspect of a person's social environment that can protect against a wide range of chronic conditions and facilitate recovery from disease. Social relationships have also been linked to dietary behaviour which may be an important pathway through which social circumstances exert their influence on health. Yet, questions remain about which structural aspects of social relationships most affect healthful dietary behaviours and whether different structural components interact to produce a combined effect. Using data from adults (≥50 years) in the European Prospective Investigation of Cancer-Norfolk study (1996-2002), we examined marital status, living arrangement and social isolation in relation to scores for variety of fruit and vegetable intake as a marker of diet quality associated with adverse health outcomes. Data were analysed with multivariable linear regression models for gender-specific and interaction associations. We found that being single or widowed was associated with a lower variety score, particularly vegetable variety, and associations were enhanced when combined with male gender, living alone or infrequent friend contact. Lower variety scores for lone-living were also observed, especially for men. Infrequent friend contact interacted with living arrangement to amplify negative associations of lone-living with variety, with statistically significant differences in contact frequency for vegetable variety. Lower levels of friend contact were associated with reduced variety of fruits and vegetables in a graded trend for both genders; the trend was more pronounced among men. Family contact appeared to have limited association with vegetable variety in men; among women, weekly contact was significantly and positively associated with vegetable variety compared to daily family contact. Results highlight the importance of considering living arrangement and/or frequency of social contact when assessing whether widowed, single or lone-living older adults are at risk of lower fruit and vegetable variety.

  16. Active and passive cigarette smoking and breast cancer risk: results from the EPIC cohort.

    PubMed

    Dossus, Laure; Boutron-Ruault, Marie-Christine; Kaaks, Rudolf; Gram, Inger T; Vilier, Alice; Fervers, Béatrice; Manjer, Jonas; Tjonneland, Anne; Olsen, Anja; Overvad, Kim; Chang-Claude, Jenny; Boeing, Heiner; Steffen, Annika; Trichopoulou, Antonia; Lagiou, Pagona; Sarantopoulou, Maria; Palli, Domenico; Berrino, Franco; Tumino, Rosario; Vineis, Paolo; Mattiello, Amalia; Bueno-de-Mesquita, H Bas; van Duijnhoven, Franzel J B; Bakker, Marieke F; Peeters, Petra Hm; Weiderpass, Elisabete; Bjerkaas, Eivind; Braaten, Tonje; Menéndez, Virginia; Agudo, Antonio; Sanchez, Maria-Jose; Amiano, Pilar; Tormo, Maria-Jose; Barricarte, Aurelio; Butt, Salma; Khaw, Kay-Tee; Wareham, Nicholas; Key, Tim J; Travis, Ruth C; Rinaldi, Sabina; McCormack, Valerie; Romieu, Isabelle; Cox, David G; Norat, Teresa; Riboli, Elio; Clavel-Chapelon, Françoise

    2014-04-15

    Recent cohort studies suggest that increased breast cancer risks were associated with longer smoking duration, higher pack-years and a dose-response relationship with increasing pack-years of smoking between menarche and first full-term pregnancy (FFTP). Studies with comprehensive quantitative life-time measures of passive smoking suggest an association between passive smoking dose and breast cancer risk. We conducted a study within the European Prospective Investigation into Cancer and Nutrition to examine the association between passive and active smoking and risk of invasive breast cancer and possible effect modification by known breast cancer risk factors. Among the 322,988 women eligible for the study, 9,822 developed breast cancer (183,608 women with passive smoking information including 6,264 cases). When compared to women who never smoked and were not being exposed to passive smoking at home or work at the time of study registration, current, former and currently exposed passive smokers were at increased risk of breast cancer (hazard ratios (HR) [95% confidence interval (CI)] 1.16 [1.05-1.28], 1.14 [1.04-1.25] and 1.10 [1.01-1.20], respectively). Analyses exploring associations in different periods of life showed the most important increase in risk with pack-years from menarche to FFTP (1.73 [1.29-2.32] for every increase of 20 pack-years) while pack-years smoked after menopause were associated with a significant decrease in breast cancer risk (HR = 0.53, 95% CI: 0.34-0.82 for every increase of 20 pack-years). Our results provide an important replication, in the largest cohort to date, that smoking (passively or actively) increases breast cancer risk and that smoking between menarche and FFTP is particularly deleterious.

  17. EPICS controlled sample mounting robots at the GM/CA CAT.

    SciTech Connect

    Makarov, O. A.; Benn, R.; Corcoran, S.; Devarapalli, S.; Fischetti, R.; Hilgart, M.; Smith, W. W.; Stepanov, S.; Xu, S.; Biosciences Division

    2007-11-11

    GM/CA CAT at Sector 23 of the advanced photon source (APS) is an NIH funded facility for crystallographic structure determination of biological macromolecules by X-ray diffraction [R.F. Fischetti, et al., GM/CA canted undulator beamlines for protein crystallography, Acta Crystallogr. A 61 (2005) C139]. The facility consists of three beamlines; two based on canted undulators and one on a bending magnet. The scientific and technical goals of the CAT emphasize streamlined, efficient throughput for a variety of sample types, sizes and qualities, representing the cutting edge of structural biology research. For this purpose all three beamlines are equipped with the ALS-style robots [C.W.Cork, et al. Status of the BCSB automated sample mounting and alignment system for macromolecular crystallography at the Advanced Light Source, SRI-2003, San-Francisco, CA, USA, August 25-29, 2003] for an automated mounting of cryo-protected macromolecular crystals. This report summarizes software and technical solutions implemented with the first of the three operational robots at beamline 23-ID-B. The automounter's Dewar can hold up to 72 or 96 samples residing in six Rigaku ACTOR magazines or ALS-style pucks, respectively. Mounting of a crystal takes approximately 2 s, during which time the temperature of the crystal is maintained near that of liquid nitrogen.

  18. EPIC Studies: Governments Finance, On Average, More Than 50 Percent Of Immunization Expenses, 2010-11.

    PubMed

    Brenzel, Logan; Schütte, Carl; Goguadze, Keti; Valdez, Werner; Le Gargasson, Jean-Bernard; Guthrie, Teresa

    2016-02-01

    Governments in resource-poor settings have traditionally relied on external donor support for immunization. Under the Global Vaccine Action Plan, adopted in 2014, countries have committed to mobilizing additional domestic resources for immunization. Data gaps make it difficult to map how well countries have done in spending government resources on immunization to demonstrate greater ownership of programs. This article presents findings of an innovative approach for financial mapping of routine immunization applied in Benin, Ghana, Honduras, Moldova, Uganda, and Zambia. This approach uses modified System of Health Accounts coding to evaluate data collected from national and subnational levels and from donor agencies. We found that government sources accounted for 27-95 percent of routine immunization financing in 2011, with countries that have higher gross national product per capita better able to finance requirements. Most financing is channeled through government agencies and used at the primary care level. Sustainable immunization programs will depend upon whether governments have the fiscal space to allocate additional resources. Ongoing robust analysis of routine immunization should be instituted within the context of total health expenditure tracking.

  19. From the Epic to the Allegorical Sublime: A Multilingual Reading of Spanish Civil War Poetry

    ERIC Educational Resources Information Center

    Cueto Asín, Elena

    2016-01-01

    This article examines poetry written during the Spanish Civil War that reflects on the modern character of the conflict: the novel tactic of aerial bombing civilian populations as it was disseminated through the mass media. A comparative reading of this body of poetry written by Spanish, British, and American authors allows for the examination of…

  20. Epic Fail: What a Perfectly Putrid Poster Can Do for You

    NASA Astrophysics Data System (ADS)

    Cooper, Paul; Galkiewicz, Julia

    2013-11-01

    After months, perhaps years, of fieldwork, lab work, and analysis, you have results that you simply have to share with the world. You've shelled out for your Fall Meeting registration. You're stoked that your poster session doesn't coincide with any of the talks you've marked as essential. And because your BFF has agreed to share accommodation costs, you have a suite at the Hotel Nikko. No one can deny that you're as confident as a Kardashian and as primed for launch as a fully fuelled Titan rocket. Ain't no stoppin' you now!

  1. A Reflection on Bakhtin's "Epic and Novel" in the Context of Early Childhood Student Teachers' Practicum

    ERIC Educational Resources Information Center

    Naughton, Christopher

    2016-01-01

    It is common in early childhood education (ECE), for student teachers to be asked to reflect on incidents or scenarios that occur while on practicum and relate their reflections to "theory." This process of identification and corroboration, demonstrates the student's familiarity with the dominant developmental narratives within which ECE…

  2. Recurring views on the structure and function of the cytoskeleton: a 300-year epic.

    PubMed

    Frixione, E

    2000-06-01

    Some unnoticed or seldom remembered precedents of current views on biological motion and its structural bases are briefly outlined, followed by a concise recapitulation of how the present theory has been constructed in the last few decades. It is shown that the evolution of the concept of fibers as main constituents of living matter led to hypothesizing microscopic structures closely resembling microtubules in the 18th century. At the beginning of this period, fibers sliding over each other and driven by interposed moving elements were envisioned as the cause of muscle contraction. In the following century, an account of the mechanism of myofibril contraction visualized longitudinal displacements of myosin-containing submicroscopic rodlets. The existence of fibrils in the protoplasm of non-muscle cells, a subject of long debate in the second half of the 19th century, was virtually discarded as irrelevant or fallacious 100 years ago. The issue resurfaced in the early 1930s as a theoretical notion--the cytosquelette--nearly two decades before intracellular filamentous structures were first observed with electron microscopy. The role originally assumed for such fibrils as signal conductors is nowadays being reappraised, although under new interpretations with a much wider significance including modulation of gene expression, morphogenesis, and even consciousness. Since all of the above ancestral conceptions were eventually abandoned, the corresponding current views are, to a certain extent, recurrent.

  3. Fruit and vegetable intake and cause-specific mortality in the EPIC study.

    PubMed

    Leenders, Max; Boshuizen, Hendriek C; Ferrari, Pietro; Siersema, Peter D; Overvad, Kim; Tjønneland, Anne; Olsen, Anja; Boutron-Ruault, Marie-Christine; Dossus, Laure; Dartois, Laureen; Kaaks, Rudolf; Li, Kuanrong; Boeing, Heiner; Bergmann, Manuela M; Trichopoulou, Antonia; Lagiou, Pagona; Trichopoulos, Dimitrios; Palli, Domenico; Krogh, Vittorio; Panico, Salvatore; Tumino, Rosario; Vineis, Paolo; Peeters, Petra H M; Weiderpass, Elisabete; Engeset, Dagrun; Braaten, Tonje; Redondo, Maria Luisa; Agudo, Antonio; Sánchez, María-José; Amiano, Pilar; Huerta, José-María; Ardanaz, Eva; Drake, Isabel; Sonestedt, Emily; Johansson, Ingegerd; Winkvist, Anna; Khaw, Kay-Tee; Wareham, Nick J; Key, Timothy J; Bradbury, Kathryn E; Johansson, Mattias; Licaj, Idlir; Gunter, Marc J; Murphy, Neil; Riboli, Elio; Bueno-de-Mesquita, H Bas

    2014-09-01

    Consumption of fruits and vegetables is associated with a lower overall mortality. The aim of this study was to identify causes of death through which this association is established. More than 450,000 participants from the European Prospective Investigation into Cancer and Nutrition study were included, of which 25,682 were reported deceased after 13 years of follow-up. Information on lifestyle, diet and vital status was collected through questionnaires and population registries. Hazard ratios (HR) with 95% confidence intervals (95% CI) for death from specific causes were calculated from Cox regression models, adjusted for potential confounders. Participants reporting consumption of more than 569 g/day of fruits and vegetables had lower risks of death from diseases of the circulatory (HR for upper fourth 0.85, 95% CI 0.77-0.93), respiratory (HR for upper fourth 0.73, 95% CI 0.59-0.91) and digestive system (HR for upper fourth 0.60, 95% CI 0.46-0.79) when compared with participants consuming less than 249 g/day. In contrast, a positive association with death from diseases of the nervous system was observed. Inverse associations were generally observed for vegetable, but not for fruit consumption. Associations were more pronounced for raw vegetable consumption, when compared with cooked vegetable consumption. Raw vegetable consumption was additionally inversely associated with death from neoplasms and mental and behavioral disorders. The lower risk of death associated with a higher consumption of fruits and vegetables may be derived from inverse associations with diseases of the circulatory, respiratory and digestive system, and may depend on the preparation of vegetables and lifestyle factors.

  4. Electrolysis Performance Improvement Concept Study (EPICS) flight experiment phase C/D

    NASA Technical Reports Server (NTRS)

    Schubert, F. H.; Lee, M. G.

    1995-01-01

    The overall purpose of the Electrolysis Performance Improvement Concept Study flight experiment is to demonstrate and validate in a microgravity environment the Static Feed Electrolyzer concept as well as investigate the effect of microgravity on water electrolysis performance. The scope of the experiment includes variations in microstructural characteristics of electrodes and current densities in a static feed electrolysis cell configuration. The results of the flight experiment will be used to improve efficiency of the static feed electrolysis process and other electrochemical regenerative life support processes by reducing power and expanding the operational range. Specific technologies that will benefit include water electrolysis for propulsion, energy storage, life support, extravehicular activity, in-space manufacturing and in-space science in addition to other electrochemical regenerative life support technologies such as electrochemical carbon dioxide and oxygen separation, electrochemical oxygen compression and water vapor electrolysis. The Electrolysis Performance Improvement Concept Study flight experiment design incorporates two primary hardware assemblies: the Mechanical/Electrochemical Assembly and the Control/Monitor Instrumentation. The Mechanical/Electrochemical Assembly contains three separate integrated electrolysis cells along with supporting pressure and temperature control components. The Control/Monitor Instrumentation controls the operation of the experiment via the Mechanical/Electrochemical Assembly components and provides for monitoring and control of critical parameters and storage of experimental data.

  5. THE XMM-NEWTON/EPIC X-RAY LIGHT CURVE ANALYSIS OF WR 6

    SciTech Connect

    Ignace, R.; Gayley, K. G.; Hamann, W.-R.; Oskinova, L. M.; Huenemoerder, D. P.; Pollock, A. M. T.; McFall, M.

    2013-09-20

    We obtained four pointings of over 100 ks each of the well-studied Wolf-Rayet star WR 6 with the XMM-Newton satellite. With a first paper emphasizing the results of spectral analysis, this follow-up highlights the X-ray variability clearly detected in all four pointings. However, phased light curves fail to confirm obvious cyclic behavior on the well-established 3.766 day period widely found at longer wavelengths. The data are of such quality that we were able to conduct a search for event clustering in the arrival times of X-ray photons. However, we fail to detect any such clustering. One possibility is that X-rays are generated in a stationary shock structure. In this context we favor a corotating interaction region (CIR) and present a phenomenological model for X-rays from a CIR structure. We show that a CIR has the potential to account simultaneously for the X-ray variability and constraints provided by the spectral analysis. Ultimately, the viability of the CIR model will require both intermittent long-term X-ray monitoring of WR 6 and better physical models of CIR X-ray production at large radii in stellar winds.

  6. EPICS controlled sample mounting robots at the GM/CA CAT

    NASA Astrophysics Data System (ADS)

    Makarov, O. A.; Benn, R.; Corcoran, S.; Devarapalli, S.; Fischetti, R.; Hilgart, M.; Smith, W. W.; Stepanov, S.; Xu, S.

    2007-11-01

    GM/CA CAT at Sector 23 of the advanced photon source (APS) is an NIH funded facility for crystallographic structure determination of biological macromolecules by X-ray diffraction [R.F. Fischetti, et al., GM/CA canted undulator beamlines for protein crystallography, Acta Crystallogr. A 61 (2005) C139]. The facility consists of three beamlines; two based on canted undulators and one on a bending magnet. The scientific and technical goals of the CAT emphasize streamlined, efficient throughput for a variety of sample types, sizes and qualities, representing the cutting edge of structural biology research. For this purpose all three beamlines are equipped with the ALS-style robots [C.W.Cork, et al. Status of the BCSB automated sample mounting and alignment system for macromolecular crystallography at the Advanced Light Source, SRI-2003, San-Francisco, CA, USA, August 25-29, 2003] for an automated mounting of cryo-protected macromolecular crystals. This report summarizes software and technical solutions implemented with the first of the three operational robots at beamline 23-ID-B. The automounter's Dewar can hold up to 72 or 96 samples residing in six Rigaku ACTOR magazines or ALS-style pucks, respectively. Mounting of a crystal takes approximately 2 s, during which time the temperature of the crystal is maintained near that of liquid nitrogen.

  7. Active and passive cigarette smoking and breast cancer risk: results from the EPIC cohort.

    PubMed

    Dossus, Laure; Boutron-Ruault, Marie-Christine; Kaaks, Rudolf; Gram, Inger T; Vilier, Alice; Fervers, Béatrice; Manjer, Jonas; Tjonneland, Anne; Olsen, Anja; Overvad, Kim; Chang-Claude, Jenny; Boeing, Heiner; Steffen, Annika; Trichopoulou, Antonia; Lagiou, Pagona; Sarantopoulou, Maria; Palli, Domenico; Berrino, Franco; Tumino, Rosario; Vineis, Paolo; Mattiello, Amalia; Bueno-de-Mesquita, H Bas; van Duijnhoven, Franzel J B; Bakker, Marieke F; Peeters, Petra Hm; Weiderpass, Elisabete; Bjerkaas, Eivind; Braaten, Tonje; Menéndez, Virginia; Agudo, Antonio; Sanchez, Maria-Jose; Amiano, Pilar; Tormo, Maria-Jose; Barricarte, Aurelio; Butt, Salma; Khaw, Kay-Tee; Wareham, Nicholas; Key, Tim J; Travis, Ruth C; Rinaldi, Sabina; McCormack, Valerie; Romieu, Isabelle; Cox, David G; Norat, Teresa; Riboli, Elio; Clavel-Chapelon, Françoise

    2014-04-15

    Recent cohort studies suggest that increased breast cancer risks were associated with longer smoking duration, higher pack-years and a dose-response relationship with increasing pack-years of smoking between menarche and first full-term pregnancy (FFTP). Studies with comprehensive quantitative life-time measures of passive smoking suggest an association between passive smoking dose and breast cancer risk. We conducted a study within the European Prospective Investigation into Cancer and Nutrition to examine the association between passive and active smoking and risk of invasive breast cancer and possible effect modification by known breast cancer risk factors. Among the 322,988 women eligible for the study, 9,822 developed breast cancer (183,608 women with passive smoking information including 6,264 cases). When compared to women who never smoked and were not being exposed to passive smoking at home or work at the time of study registration, current, former and currently exposed passive smokers were at increased risk of breast cancer (hazard ratios (HR) [95% confidence interval (CI)] 1.16 [1.05-1.28], 1.14 [1.04-1.25] and 1.10 [1.01-1.20], respectively). Analyses exploring associations in different periods of life showed the most important increase in risk with pack-years from menarche to FFTP (1.73 [1.29-2.32] for every increase of 20 pack-years) while pack-years smoked after menopause were associated with a significant decrease in breast cancer risk (HR = 0.53, 95% CI: 0.34-0.82 for every increase of 20 pack-years). Our results provide an important replication, in the largest cohort to date, that smoking (passively or actively) increases breast cancer risk and that smoking between menarche and FFTP is particularly deleterious. PMID:24590452

  8. EPIC modeling of soil organic carbon sequestration in croplands of Iowa

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Agricultural lands can mitigate detrimental effects of greenhouse gases because soils can be managed to reduce carbon dioxide emissions and sequester carbon in soil organic matter. Simulation models are useful tools for studying the long-term impacts of crop and soil management practices on soil org...

  9. Cultural Diversity in Science Education through "Novelization": Against the "Epicization" of Science and Cultural Centralization

    ERIC Educational Resources Information Center

    van Eijck, Michiel; Roth, Wolff-Michael

    2011-01-01

    Science educators are confronted with the challenge to accommodate in their classes an increasing cultural and linguistic diversity that results from globalization. Challenged by the call to work towards valuing and keeping this diversity in the face of the canonical nature of school science discourse, we propose a new way of thinking about and…

  10. Modeling soil carbon sequestration with EPIC and the soil conditioning index

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Increasing CO2 in the atmosphere is a concern, because of its potential to warm the planet. CO2 and other greenhouse gases act as a barrier to prevent heat escaping from the atmosphere. Prior to the industrial revolution, atmospheric CO2 concentration was about 280 parts per million (ppm). A deli...

  11. 75 FR 22519 - Airworthiness Directives; Honeywell International Inc., Primus EPIC and Primus APEX Flight...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-04-29

    ... Policies and Procedures (44 FR 11034, February 26, 1979), and (3) Will not have a significant economic...- 3343; e-mail AeroTechSupport@Honeywell.com ; Internet http://portal.honeywell.com/wps/portal/aero....honeywell.com/wps/portal/aero . (3) You may review copies of the service information at the FAA,...

  12. Implementing practice management strategies to improve patient care: the EPIC project.

    PubMed

    Attwell, David; Rogers-Warnock, Leslie; Nemis-White, Joanna

    2012-01-01

    Healthcare gaps, the difference between usual care and best care, are evident in Canada, particularly with respect to our aging, ailing population. Primary care practitioners are challenged to identify, prevent and close care gaps in their practice environment given the competing demands of informed, litigious patients with complex medical needs, ever-evolving scientific evidence with new treatment recommendations across many disciplines and an enhanced emphasis on quality and accountability in healthcare. Patient-centred health and disease management partnerships using measurement, feedback and communication of practice patterns and outcomes have been shown to narrow care gaps. Practice management strategies such as the use of patient registries and recall systems have also been used to help practitioners better understand, follow and proactively manage populations of patients in their practice. The Enhancing Practice to Improve Care project was initiated to determine the impact of a patient-centred health and disease management partnership using practice management strategies to improve patient care and outcomes for patients with chronic kidney disease (CKD). Forty-four general practices from four regions of British Columbia participated and, indeed, demonstrated that care and outcomes for patients with CKD could be improved via the implementation of practice management strategies in a patient-centred partnership measurement model of health and disease management.

  13. Television Viewing and Incident Cardiovascular Disease: Prospective Associations and Mediation Analysis in the EPIC Norfolk Study

    PubMed Central

    Wijndaele, Katrien; Brage, Søren; Besson, Hervé; Khaw, Kay-Tee; Sharp, Stephen J.; Luben, Robert; Bhaniani, Amit; Wareham, Nicholas J.; Ekelund, Ulf

    2011-01-01

    Background Although television viewing time is detrimentally associated with intermediate cardiovascular risk factors, the relationship with incident total (i.e. combined fatal and non-fatal) cardiovascular disease (CVD), non-fatal CVD and coronary heart disease is largely unknown. This study examined whether television viewing time is associated with these three outcomes, independently of physical activity energy expenditure and other confounding variables. Methodology/Principal Findings A population-based cohort of 12,608 men and women (aged 61.4±9.0), free from stroke, myocardial infarction and cancer at baseline in 1998–2000 were followed up until 2007 (6.9±1.9 years). Participants self-reported education, smoking, alcohol use, antihypertensive, lipid lowering and antidepressant medication, disease history, total energy intake, sleep duration, physical activity and television viewing. BMI, waist circumference, blood pressure, triglycerides, HDL cholesterol and glycated haemoglobin (HbA1c) were measured by standardized procedures; a clustered metabolic risk score was constructed. Every one hour/day increase in television viewing was associated with an increased hazard for total (HR = 1.06, 95%CI = 1.03–1.08; 2,620 cases), non-fatal CVD (HR = 1.06, 95%CI = 1.03–1.09; 2,134 cases), and coronary heart disease (HR = 1.08, 95%CI = 1.03–1.13; 940 cases), independent of gender, age, education, smoking, alcohol, medication, diabetes status, CVD family history, sleep duration and physical activity energy expenditure. Energy intake, BMI, waist circumference, blood pressure, triglycerides, HDL cholesterol, HbA1c and the clustered metabolic risk score only partially mediated these associations. Conclusions These results indicate that the most prevalent leisure time (sedentary) behaviour, television viewing, independently contributes to increased CVD risk. Recommendations on reducing television viewing time should be considered. PMID:21647437

  14. CagA+ Helicobacter pylori infection and gastric cancer risk in the EPIC-EURGAST study.

    PubMed

    Palli, Domenico; Masala, Giovanna; Del Giudice, Giuseppe; Plebani, Mario; Basso, Daniela; Berti, Duccio; Numans, Mattijs E; E Numans, Mattijs; Ceroti, Marco; Peeters, Petra H M; Bueno de Mesquita, H Bas; Buchner, Frederike L; Clavel-Chapelon, Francoise; Boutron-Ruault, Marie-Christine; Krogh, Vittorio; Saieva, Calogero; Vineis, Paolo; Panico, Salvatore; Tumino, Rosario; Nyrén, Olof; Simán, Henrik; Berglund, Goran; Hallmans, Goran; Sanchez, Maria-Jose; Larrãnaga, Nerea; Barricarte, Aurelio; Navarro, Carmen; Quiros, Jose R; Key, Tim; Allen, Naomi; Bingham, Sheila; Khaw, Kay Tee; Boeing, Heiner; Weikert, Cornelia; Linseisen, Jakob; Nagel, Gabriele; Overvad, Kim; Thomsen, Reimar W; Tjonneland, Anne; Olsen, Anja; Trichoupoulou, Antonia; Trichopoulos, Dimitrios; Arvaniti, Athina; Pera, Guillem; Kaaks, Rudolf; Jenab, Mazda; Ferrari, Pietro; Nesi, Gabriella; Carneiro, Fatima; Riboli, Elio; Gonzalez, Carlos A

    2007-02-15

    Helicobacter pylori (H. pylori), atrophic gastritis, dietary and life-style factors have been associated with gastric cancer (GC). These factors have been evaluated in a large case-control study nested in the European Prospective Investigation into Cancer and Nutrition carried out in 9 countries, including the Mediterranean area. Participants, enrolled in 1992-1998, provided life-style and dietary information and a blood sample (360,000; mean follow-up: 6.1 years). For 233 GC cases diagnosed after enrolment and their 910 controls individually-matched by center, gender, age and blood donation date H. pylori antibodies (antilysate and antiCagA) and plasma Pepsinogen A (PGA) were measured by ELISA methods. Severe chronic atrophic gastritis (SCAG) was defined as PGA circulating levels <22 microg/l. Overall, in a conditional logistic regression analysis adjusted for education, smoke, weight and consumption of total vegetables, fruit, red and preserved meat, H. pylori seropositivity was associated with GC risk. Subjects showing only antibodies anti-H. pylori lysate, however, were not at increased risk, while those with antiCagA antibodies had a 3.4-fold increased risk. Overall, the odds ratio associated with SCAG was 3.3 (95% CI 2.2-5.2). According to site, the risk of noncardia GC associated with CagA seropositivity showed a further increase (OR 6.5; 95% CI 3.3-12.6); on the other hand, a ten-fold increased risk of cardia GC was associated with SCAG (OR 11.0; 95% CI 3.0-40.9). These results support the causal relationship between H. pylori CagA+ strains infection, and GC in these European populations even after taking into account dietary habits. This association was limited to distal GC, while serologically defined SCAG was strongly associated with cardia GC, thus suggesting a divergent risk pattern for these 2 sites. PMID:17131317

  15. Epic Fails: Reconceptualizing Failure as a Catalyst for Developing Creative Persistence within Teaching and Learning Experiences

    ERIC Educational Resources Information Center

    Smith, Shaunna

    2015-01-01

    This article presents findings from a case study that explored creative persistence through a reconceptualization of what it means to "fail" within an educational setting. Participants included in-service teachers enrolled in a semester-long graduate level educational technology course who reflected that they were able to view their…

  16. Pre-diagnostic polyphenol intake and breast cancer survival: the European Prospective Investigation into Cancer and Nutrition (EPIC) cohort.

    PubMed

    Kyrø, Cecilie; Zamora-Ros, Raul; Scalbert, Augustin; Tjønneland, Anne; Dossus, Laure; Johansen, Christoffer; Bidstrup, Pernille Envold; Weiderpass, Elisabete; Christensen, Jane; Ward, Heather; Aune, Dagfinn; Riboli, Elio; His, Mathilde; Clavel-Chapelon, Françoise; Baglietto, Laura; Katzke, Verena; Kühn, Tilman; Boeing, Heiner; Floegel, Anna; Overvad, Kim; Lasheras, Cristina; Travier, Noémie; Sánchez, Maria-José; Amiano, Pilar; Chirlaque, Maria-Dolores; Ardanaz, Eva; Khaw, Kay-Tee; Wareham, Nick; Perez-Cornago, Aurora; Trichopoulou, Antonia; Lagiou, Pagona; Vasilopoulou, Effie; Masala, Giovanna; Grioni, Sara; Berrino, Franco; Tumino, Rosario; Sacerdote, Carlotta; Mattiello, Amalia; Bueno-de-Mesquita, H Bas; Peeters, Petra H; van Gils, Carla; Borgquist, Signe; Butt, Salma; Zeleniuch-Jacquotte, Anne; Sund, Malin; Hjartåker, Anette; Skeie, Guri; Olsen, Anja; Romieu, Isabelle

    2015-11-01

    The aim was to investigate the association between pre-diagnostic intakes of polyphenol classes (flavonoids, lignans, phenolic acids, stilbenes, and other polyphenols) in relation to breast cancer survival (all-cause and breast cancer-specific mortality). We used data from the European Prospective Investigation into Cancer and Nutrition cohort. Pre-diagnostic usual diet was assessed using dietary questionnaires, and polyphenol intakes were estimated using the Phenol-Explorer database. We followed 11,782 breast cancer cases from time of diagnosis until death, end of follow-up or last day of contact. During a median of 6 years, 1482 women died (753 of breast cancer). We related polyphenol intake to all-cause and breast cancer-specific mortality using Cox proportional hazard models with time since diagnosis as underlying time and strata for age and country. Among postmenopausal women, an intake of lignans in the highest versus lowest quartile was related to a 28 % lower risk of dying from breast (adjusted model: HR, quartile 4 vs. quartile 1, 0.72, 95 % CI 0.53; 0.98). In contrast, in premenopausal women, a positive association between lignan intake and all-cause mortality was found (adjusted model: HR, quartile 4 vs. quartile 1, 1.63, 95 % CI 1.03; 2.57). We found no association for other polyphenol classes. Intake of lignans before breast cancer diagnosis may be related to improved survival among postmenopausal women, but may on the contrary worsen the survival for premenopausal women. This suggests that the role of phytoestrogens in breast cancer survival is complex and may be dependent of menopausal status.

  17. Dietary intakes and risk of lymphoid and myeloid leukemia in the European Prospective Investigation into Cancer and Nutrition (EPIC).

    PubMed

    Saberi Hosnijeh, Fatemeh; Peeters, Petra; Romieu, Isabelle; Kelly, Rachel; Riboli, Elio; Olsen, Anja; Tjønneland, Anne; Fagherazzi, Guy; Clavel-Chapelon, Françoise; Dossus, Laure; Nieters, Alexandra; Teucher, Birgit; Trichopoulou, Antonia; Naska, Androniki; Valanou, Elisavet; Mattiello, Amalia; Sieri, Sabina; Parr, Christine L; Engeset, Dagrun; Skeie, Guri; Dorronsoro, Miren; Barricarte, Aurelio; Sánchez, Maria-José; Ericson, Ulrika; Sonestedt, Emily; Bueno-de-Mesquita, H Bas; Ros, Martine M; Travis, Ruth C; Key, Timothy J; Vineis, Paolo; Vermeulen, Roel

    2014-01-01

    The etiology of leukemias cannot entirely be explained by known risk factors, including ionizing radiation, benzene exposure, and infection with human T cell leukemia virus. A number of studies suggested that diet influences the risk of adult leukemias. However, results have been largely inconsistent. We examined the potential association between dietary factors and risk of leukemias among participants of the European Prospective Investigation into Cancer and Nutrition study. Among the 477,325 participants with mean follow-up of 11.34 yr (SD = 2.47), 773 leukemias (373 and 342 cases of lymphoid and myeloid leukemia, respectively) were identified. Diet over the previous 12 mo was assessed at baseline using a validated country-specific dietary questionnaire. Cox proportional hazards regression was used to explore the association between dietary factors that have previously been associated with leukemia risk, including red and processed meat, poultry, offal, fish, dairy products, vegetables, fruits, and seeds/nuts, and risk of both lymphoid and myeloid leukemias. No significant associations were observed between dietary measures and total, lymphoid, and myeloid leukemias. Additional subtype analyses showed no dietary association with risk of major subtypes of leukemias. In summary, this study did not support a possible link between selected dietary factors and risk of leukemias.

  18. Efficacy and safety of deferasirox at low and high iron burdens: results from the EPIC magnetic resonance imaging substudy.

    PubMed

    Porter, J B; Elalfy, M S; Taher, A T; Aydinok, Y; Chan, L L; Lee, S-H; Sutcharitchan, P; Habr, D; Martin, N; El-Beshlawy, A

    2013-01-01

    The effect of deferasirox dosing tailored for iron burden and iron loading based on liver iron concentration (LIC) was assessed over 1 year in less versus more heavily iron-overloaded patients in a substudy of the Evaluation of Patients' Iron Chelation with Exjade®. Deferasirox starting dose was 10-30 mg/kg/day, depending on blood transfusion frequency, with recommended dose adjustments every 3 months. Therapeutic goals were LIC maintenance or reduction in patients with baseline LIC <7 or ≥7 mg Fe/g dry weight (dw), respectively. Changes in LIC (R2-magnetic resonance imaging) and serum ferritin after 1 year were assessed. Adverse events (AEs) and laboratory parameters were monitored throughout. Of 374 patients, 71 and 303 had baseline LIC <7 and ≥7 mg Fe/g dw, respectively; mean deferasirox doses were 20.7 and 27.1 mg/kg/day (overall average time to dose increase, 24 weeks). At 1 year, mean LIC and median serum ferritin levels were maintained in the low-iron cohort (-0.02 ± 2.4 mg Fe/g dw, -57 ng/mL; P = not significant) and significantly decreased in the high-iron cohort (-6.1 ± 9.1 mg Fe/g dw, -830 ng/mL; P < 0.0001). Drug-related gastrointestinal AEs, mostly mild to moderate, were more frequently reported in the <7 versus ≥7 mg Fe/g dw cohort (39.4 versus 20.8 %; P = 0.001) and were not confounded by diagnosis, dosing, ethnicity, or hepatitis B and/or C history. Reported serum creatinine increases did not increase in low- versus high-iron cohort patients. Deferasirox doses of 20 mg/kg/day maintained LIC <7 mg Fe/g dw and doses of 30 mg/kg/day were required for net iron reduction in the high-iron cohort, with clinically manageable safety profiles. The higher incidence of gastrointestinal AEs at lower iron burdens requires further investigation.

  19. Total, caffeinated and decaffeinated coffee and tea intake and gastric cancer risk: results from the EPIC cohort study.

    PubMed

    Sanikini, Harinakshi; Dik, Vincent K; Siersema, Peter D; Bhoo-Pathy, Nirmala; Uiterwaal, Cuno S P M; Peeters, Petra H M; González, Carlos A; Zamora-Ros, Raul; Overvad, Kim; Tjønneland, Anne; Roswall, Nina; Boutron-Ruault, Marie-Christine; Fagherazzi, Guy; Racine, Antoine; Kühn, Tilman; Katzke, Verena; Boeing, Heiner; Trichopoulou, Antonia; Trichopoulos, Dimitrios; Lagiou, Pagona; Palli, Domenico; Grioni, Sara; Vineis, Paolo; Tumino, Rosario; Panico, Salvatore; Weiderpass, Elisabete; Skeie, Guri; Braaten, Tonje; Huerta, José María; Sánchez-Cantalejo, Emilio; Barricarte, Aurelio; Sonestedt, Emily; Wallstrom, Peter; Nilsson, Lena Maria; Johansson, Ingegerd; Bradbury, Kathryn E; Khaw, Kay-Tee; Wareham, Nick; Huybrechts, Inge; Freisling, Heinz; Cross, Amanda J; Riboli, Elio; Bueno-de-Mesquita, H B

    2015-03-15

    Prospective studies examining the association between coffee and tea consumption and gastric cancer risk have shown inconsistent results. We investigated the association between coffee (total, caffeinated and decaffeinated) and tea consumption and the risk of gastric cancer by anatomical site and histological type in the European Prospective Investigation into Cancer and Nutrition study. Coffee and tea consumption were assessed by dietary questionnaires at baseline. Adjusted hazard ratios (HRs) were calculated using Cox regression models. During 11.6 years of follow up, 683 gastric adenocarcinoma cases were identified among 477,312 participants. We found no significant association between overall gastric cancer risk and consumption of total coffee (HR 1.09, 95%-confidence intervals [CI]: 0.84-1.43; quartile 4 vs. non/quartile 1), caffeinated coffee (HR 1.14, 95%-CI: 0.82-1.59; quartile 4 vs. non/quartile 1), decaffeinated coffee (HR 1.07, 95%-CI: 0.75-1.53; tertile 3 vs. non/tertile 1) and tea (HR 0.81, 95%-CI: 0.59-1.09; quartile 4 vs. non/quartile 1). When stratified by anatomical site, we observed a significant positive association between gastric cardia cancer risk and total coffee consumption per increment of 100 mL/day (HR 1.06, 95%-CI: 1.03-1.11). Similarly, a significant positive association was observed between gastric cardia cancer risk and caffeinated coffee consumption (HR 1.98, 95%-CI: 1.16-3.36, p-trend=0.06; quartile 3 vs. non/quartile 1) and per increment of 100 mL/day (HR 1.09, 95%-CI: 1.04-1.14). In conclusion, consumption of total, caffeinated and decaffeinated coffee and tea is not associated with overall gastric cancer risk. However, total and caffeinated coffee consumption may be associated with an increased risk of gastric cardia cancer. Further prospective studies are needed to rule out chance or confounding.

  20. Going with the Floe? An Analysis of the Epic Expeditions of Fridtjof Nansen and Sir Ernest Shackleton

    NASA Astrophysics Data System (ADS)

    Pfirman, S.; Tremblay, B.; Fowler, C.

    2007-12-01

    One hundred years ago, the heroic age of polar exploration was underway. At first glance the Arctic-based Fridtjof Nansen and Antarctic-based Sir Ernest Shackleton, and their most famous expeditions, are literally poles apart. But the expeditions wound up having much in common, including the fact that their fates were largely dependent on their drift trajectory in the sea ice pack and, in Shackleton's case, the wind and ocean currents. These are natural forces, outside the control of the expedition leaders. Were Nansen and Shackleton lucky that the ice and ocean delivered them and their crew to locations from which they could return? Or were their fates more or less inevitable, within the normal range of natural conditions? While we cannot reconstruct the wind and ocean patterns that actually existed 100 years ago to answer this question, we looked at variability over the past three decades to explore potential alternate fates of these expeditions. Our analysis indicates that Nansen and Shackleton were both lucky and unlucky in the natural conditions that they encountered during their expeditions. Most years since 1979, Nansen would have gotten much closer to the North Pole - his goal -- than his ship did in 1895, so he was unlucky in that respect. On the other hand, he was lucky with the relatively short drift duration of his ship in the Arctic pack ice. Shackleton was also lucky in the rapid pace of drift within the pack. The fact that his trajectory was so far to the west might have been a factor in the crushing and sinking of his ship, but it did allow him to land most of his men on Elephant Island while he went for help. Shackleton's heroic, and harrowing, boat journey to South Georgia turned out to be helped by prevailing conditions: it was within the likely ocean drift trajectory from Elephant Island. Analyses such as these, including "Nansen's Luck" by Roger Colony, and "The Coldest March" by Susan Solomon, help set history and profiles of leadership within a scientific framework, engaging an interdisciplinary suite of scholars, students and the general public in understanding the role of the environment, environmental variability, and environmental change.

  1. Gene-Lifestyle Interaction and Type 2 Diabetes: The EPIC InterAct Case-Cohort Study

    PubMed Central

    Scott, Robert A.; Deloukas, Panos; Forouhi, Nita G.; Froguel, Philippe; Groop, Leif C.; Hansen, Torben; Palla, Luigi; Pedersen, Oluf; Schulze, Matthias B.; Tormo, Maria-Jose; Wheeler, Eleanor; Agnoli, Claudia; Arriola, Larraitz; Barricarte, Aurelio; Boeing, Heiner; Clarke, Geraldine M.; Clavel-Chapelon, Françoise; Duell, Eric J.; Fagherazzi, Guy; Kaaks, Rudolf; Kerrison, Nicola D.; Key, Timothy J.; Khaw, Kay Tee; Kröger, Janine; Lajous, Martin; Morris, Andrew P.; Navarro, Carmen; Nilsson, Peter M.; Overvad, Kim; Palli, Domenico; Panico, Salvatore; Quirós, J. Ramón; Rolandsson, Olov; Sacerdote, Carlotta; Sánchez, María-José; Slimani, Nadia; Spijkerman, Annemieke M. W.; Tumino, Rosario; van der A, Daphne L.; van der Schouw, Yvonne T.; Barroso, Inês; McCarthy, Mark I.; Riboli, Elio; Wareham, Nicholas J.

    2014-01-01

    Background Understanding of the genetic basis of type 2 diabetes (T2D) has progressed rapidly, but the interactions between common genetic variants and lifestyle risk factors have not been systematically investigated in studies with adequate statistical power. Therefore, we aimed to quantify the combined effects of genetic and lifestyle factors on risk of T2D in order to inform strategies for prevention. Methods and Findings The InterAct study includes 12,403 incident T2D cases and a representative sub-cohort of 16,154 individuals from a cohort of 340,234 European participants with 3.99 million person-years of follow-up. We studied the combined effects of an additive genetic T2D risk score and modifiable and non-modifiable risk factors using Prentice-weighted Cox regression and random effects meta-analysis methods. The effect of the genetic score was significantly greater in younger individuals (p for interaction  = 1.20×10−4). Relative genetic risk (per standard deviation [4.4 risk alleles]) was also larger in participants who were leaner, both in terms of body mass index (p for interaction  = 1.50×10−3) and waist circumference (p for interaction  = 7.49×10−9). Examination of absolute risks by strata showed the importance of obesity for T2D risk. The 10-y cumulative incidence of T2D rose from 0.25% to 0.89% across extreme quartiles of the genetic score in normal weight individuals, compared to 4.22% to 7.99% in obese individuals. We detected no significant interactions between the genetic score and sex, diabetes family history, physical activity, or dietary habits assessed by a Mediterranean diet score. Conclusions The relative effect of a T2D genetic risk score is greater in younger and leaner participants. However, this sub-group is at low absolute risk and would not be a logical target for preventive interventions. The high absolute risk associated with obesity at any level of genetic risk highlights the importance of universal rather than targeted approaches to lifestyle intervention. Please see later in the article for the Editors' Summary PMID:24845081

  2. A direct assessment of genetic contribution to the incidence of coronary infarct in the general population Greek EPIC cohort

    Technology Transfer Automated Retrieval System (TEKTRAN)

    To estimate the fraction of the incidence of coronary infarct attributable to the combined action of common genetic polymorphisms likely to be related to this condition, we conducted a case-control study nested within the Greek component of the European Prospective Investigation into Cancer and Nutr...

  3. Dietary intakes and risk of lymphoid and myeloid leukemia in the European Prospective Investigation into Cancer and Nutrition (EPIC).

    PubMed

    Saberi Hosnijeh, Fatemeh; Peeters, Petra; Romieu, Isabelle; Kelly, Rachel; Riboli, Elio; Olsen, Anja; Tjønneland, Anne; Fagherazzi, Guy; Clavel-Chapelon, Françoise; Dossus, Laure; Nieters, Alexandra; Teucher, Birgit; Trichopoulou, Antonia; Naska, Androniki; Valanou, Elisavet; Mattiello, Amalia; Sieri, Sabina; Parr, Christine L; Engeset, Dagrun; Skeie, Guri; Dorronsoro, Miren; Barricarte, Aurelio; Sánchez, Maria-José; Ericson, Ulrika; Sonestedt, Emily; Bueno-de-Mesquita, H Bas; Ros, Martine M; Travis, Ruth C; Key, Timothy J; Vineis, Paolo; Vermeulen, Roel

    2014-01-01

    The etiology of leukemias cannot entirely be explained by known risk factors, including ionizing radiation, benzene exposure, and infection with human T cell leukemia virus. A number of studies suggested that diet influences the risk of adult leukemias. However, results have been largely inconsistent. We examined the potential association between dietary factors and risk of leukemias among participants of the European Prospective Investigation into Cancer and Nutrition study. Among the 477,325 participants with mean follow-up of 11.34 yr (SD = 2.47), 773 leukemias (373 and 342 cases of lymphoid and myeloid leukemia, respectively) were identified. Diet over the previous 12 mo was assessed at baseline using a validated country-specific dietary questionnaire. Cox proportional hazards regression was used to explore the association between dietary factors that have previously been associated with leukemia risk, including red and processed meat, poultry, offal, fish, dairy products, vegetables, fruits, and seeds/nuts, and risk of both lymphoid and myeloid leukemias. No significant associations were observed between dietary measures and total, lymphoid, and myeloid leukemias. Additional subtype analyses showed no dietary association with risk of major subtypes of leukemias. In summary, this study did not support a possible link between selected dietary factors and risk of leukemias. PMID:24279598

  4. X-ray emission from the Wolf-Rayet bubble NGC 6888 - II. XMM-Newton EPIC observations

    NASA Astrophysics Data System (ADS)

    Toalá, J. A.; Guerrero, M. A.; Chu, Y.-H.; Arthur, S. J.; Tafoya, D.; Gruendl, R. A.

    2016-03-01

    We present deep XMM-Newton European Photon Imaging Camera observations of the Wolf-Rayet (WR) bubble NGC 6888 around the star WR 136. The complete X-ray mapping of the nebula confirms the distribution of the hot gas in three maxima spatially associated with the caps and north-west blowout hinted at by previous Chandra observations. The global X-ray emission is well described by a two-temperature optically thin plasma model (T1 = 1.4 × 106 K, T2 = 8.2 × 106 K) with a luminosity of LX = 7.8 × 1033 erg s-1 in the 0.3-1.5 keV energy range. The rms electron density of the X-ray-emitting gas is estimated to be ne = 0.4 cm-3. The high-quality observations presented here reveal spectral variations within different regions in NGC 6888, which allowed us for the first time to detect temperature and/or nitrogen abundance inhomogeneities in the hot gas inside a WR nebula. One possible explanation for such spectral variations is that the mixing of material from the outer nebula into the hot bubble is less efficient around the caps than in other nebular regions.

  5. Anatomy of the AGN in NGC 5548. VIII. XMM-Newton's EPIC detailed view of an unexpected variable multilayer absorber

    NASA Astrophysics Data System (ADS)

    Cappi, M.; De Marco, B.; Ponti, G.; Ursini, F.; Petrucci, P.-O.; Bianchi, S.; Kaastra, J. S.; Kriss, G. A.; Mehdipour, M.; Whewell, M.; Arav, N.; Behar, E.; Boissay, R.; Branduardi-Raymont, G.; Costantini, E.; Ebrero, J.; Di Gesu, L.; Harrison, F. A.; Kaspi, S.; Matt, G.; Paltani, S.; Peterson, B. M.; Steenbrugge, K. C.; Walton, D. J.

    2016-07-01

    In 2013, we conducted a large multi-wavelength campaign on the archetypical Seyfert 1 galaxy NGC 5548. Unexpectedly, this usually unobscured source appeared strongly absorbed in the soft X-rays during the entire campaign, and signatures of new and strong outflows were present in the almost simultaneous UV HST/COS data. Here we carry out a comprehensive spectral analysis of all available XMM-Newton observations of NGC 5548 (precisely 14 observations from our campaign plus three from the archive, for a total of ~763 ks) in combination with three simultaneous NuSTAR observations. We obtain a best-fit underlying continuum model composed by i) a weakly varying flat (Γ ~ 1.5-1.7) power-law component; ii) a constant, cold reflection (FeK + continuum) component; iii) a soft excess, possibly owing to thermal Comptonization; and iv) a constant, ionized scattered emission-line dominated component. Our main findings are that, during the 2013 campaign, the first three of these components appear to be partially covered by a heavy and variable obscurer that is located along the line of sight (LOS), which is consistent with a multilayer of cold and mildly ionized gas. We characterize in detail the short timescale (mostly ~ks-to-days) spectral variability of this new obscurer, and find it is mostly due to a combination of column density and covering factor variations, on top of intrinsic power-law (flux and slope) variations. In addition, our best-fit spectrum is left with several (but marginal) absorption features at rest-frame energies ~6.7-6.9 keV and ~8 keV, aswell as a weak broad emission line feature redwards of the 6.4 keV emission line. These could indicate a more complex underlying model, e.g. a P-Cygni-type emission profile if we allow for a large velocity and wide-angle outflow. These findings are consistent with a picture where the obscurer represents the manifestation along the LOS of a multilayer of gas, which is also in multiphase, and which is likely outflowing at high speed, and simultaneously producing heavy obscuration and scattering in the X-rays, as well as broad absorption features in the UV.

  6. Life stress, emotional health, and mean telomere length in the European Prospective Investigation into Cancer (EPIC)-Norfolk population study.

    PubMed

    Surtees, Paul G; Wainwright, Nicholas W J; Pooley, Karen A; Luben, Robert N; Khaw, Kay-Tee; Easton, Douglas F; Dunning, Alison M

    2011-11-01

    We investigated the association between psychological stress, emotional health, and relative mean telomere length in an ethnically homogeneous population of 4,441 women, aged 41-80 years. Mean telomere length was measured using high-throughput quantitative real-time polymerase chain reaction. Social adversity exposure and emotional health were assessed through questionnaire and covariates through direct measurement and questionnaire. This study found evidence that adverse experiences during childhood may be associated with shorter telomere length. This finding remained after covariate adjustment and showed evidence of a dose-response relationship with increasing number of reported childhood difficulties associated with decreasing relative mean telomere length. No associations were observed for any of the other summary measures of social adversity and emotional health considered. These results extend and provide support for some previous findings concerning the association of adverse experience and emotional health histories with shorter telomere length in adulthood. Replication of these findings in longitudinal studies is now essential.

  7. FE K EMISSION AND ABSORPTION FEATURES IN THE XMM-EPIC SPECTRUM OF THE SEYFERT GALAXY IC 4329A

    NASA Technical Reports Server (NTRS)

    Markowitz, A.; Reeves, J. N.; Braito, V.

    2001-01-01

    We present a re-analysis of the XMM-Newton long-look of the X-ray bright Seyfert galaxy IC 4329a. The Fe K bandpass is dominated by two peaks, consistent with emission from neutral or near-neutral Fe Ka and KP. A relativistic diskline model whereby both peaks are the result of one doubly-peaked diskline profile is found to be a poor description of the data. Models using two relativistic disklines are found to describe the emission profile well. A low-inclination, moderately-relativistic dual-diskline model is possible if the contribution from narrow components, due to distant material, is small or absent. A high-inclination, moderately relativistic profile for each peak is possible if there are roughly equal contributions from both the broad and narrow components. Upper limits on Fe XXV and Fe XXVI emission and absorption at the systemic velocity of IC 4329a are obtained. We also present the results of RXTE monitoring of this source obtained so far; the combined XMM-Newton and RXTE data sets allow us to explore the time-resolved spectral behavior of this source on time scales ranging from hours to 2 years. We find no strong evidence for variability of the Fe Ka emission line on any time scale probed, likely due to the minimal level of continuum variability. We detect a narrow absorption line, at a energy of 7.68 keV in the rest frame of the source; its significance has been confirmed using Monte Carlo simulations. This feature is most likely due to absorption from Fe XXVI blueshifted to approximately 0.1c relative to the systemic velocity, making IC 4329a the lowest-redshift AGN known with a high-velocity, highly-ionized outflow component. As is often the case with similar outflows seen in high-luminosity quasars, the estimated mass outflow rate is larger than the inflow accretion rate, signaling that the outflow represents a substantial portion of the total energy budget of the AGN. The outflow could arise from a radiatively-driven disk wind, or it may be in the form of a discrete, transient blob of ejected material.

  8. 2008 Principal/Vice Principal Survey Results for Evaluation of the Effective Practice Incentive Community (EPIC). Final Report

    ERIC Educational Resources Information Center

    Chaplin, Duncan; Verghese, Shinu; Chiang, Hanley; Sonnenfeld, Kathy; Sullivan, Margaret; Kennen, Barbara; Knechtel, Virginia; Hall, John; Harris, Dominic

    2009-01-01

    In 2006 and 2007, the U.S. Department of Education (USDOE) awarded Teacher Incentive Fund (TIF) grants for the development of systems to compensate teachers and principals in part based on increases in student achievement. New Leaders for New Schools (NLNS) received five of these grants and is using them to implement its Effective Practice…

  9. Total, caffeinated and decaffeinated coffee and tea intake and gastric cancer risk: results from the EPIC cohort study.

    PubMed

    Sanikini, Harinakshi; Dik, Vincent K; Siersema, Peter D; Bhoo-Pathy, Nirmala; Uiterwaal, Cuno S P M; Peeters, Petra H M; González, Carlos A; Zamora-Ros, Raul; Overvad, Kim; Tjønneland, Anne; Roswall, Nina; Boutron-Ruault, Marie-Christine; Fagherazzi, Guy; Racine, Antoine; Kühn, Tilman; Katzke, Verena; Boeing, Heiner; Trichopoulou, Antonia; Trichopoulos, Dimitrios; Lagiou, Pagona; Palli, Domenico; Grioni, Sara; Vineis, Paolo; Tumino, Rosario; Panico, Salvatore; Weiderpass, Elisabete; Skeie, Guri; Braaten, Tonje; Huerta, José María; Sánchez-Cantalejo, Emilio; Barricarte, Aurelio; Sonestedt, Emily; Wallstrom, Peter; Nilsson, Lena Maria; Johansson, Ingegerd; Bradbury, Kathryn E; Khaw, Kay-Tee; Wareham, Nick; Huybrechts, Inge; Freisling, Heinz; Cross, Amanda J; Riboli, Elio; Bueno-de-Mesquita, H B

    2015-03-15

    Prospective studies examining the association between coffee and tea consumption and gastric cancer risk have shown inconsistent results. We investigated the association between coffee (total, caffeinated and decaffeinated) and tea consumption and the risk of gastric cancer by anatomical site and histological type in the European Prospective Investigation into Cancer and Nutrition study. Coffee and tea consumption were assessed by dietary questionnaires at baseline. Adjusted hazard ratios (HRs) were calculated using Cox regression models. During 11.6 years of follow up, 683 gastric adenocarcinoma cases were identified among 477,312 participants. We found no significant association between overall gastric cancer risk and consumption of total coffee (HR 1.09, 95%-confidence intervals [CI]: 0.84-1.43; quartile 4 vs. non/quartile 1), caffeinated coffee (HR 1.14, 95%-CI: 0.82-1.59; quartile 4 vs. non/quartile 1), decaffeinated coffee (HR 1.07, 95%-CI: 0.75-1.53; tertile 3 vs. non/tertile 1) and tea (HR 0.81, 95%-CI: 0.59-1.09; quartile 4 vs. non/quartile 1). When stratified by anatomical site, we observed a significant positive association between gastric cardia cancer risk and total coffee consumption per increment of 100 mL/day (HR 1.06, 95%-CI: 1.03-1.11). Similarly, a significant positive association was observed between gastric cardia cancer risk and caffeinated coffee consumption (HR 1.98, 95%-CI: 1.16-3.36, p-trend=0.06; quartile 3 vs. non/quartile 1) and per increment of 100 mL/day (HR 1.09, 95%-CI: 1.04-1.14). In conclusion, consumption of total, caffeinated and decaffeinated coffee and tea is not associated with overall gastric cancer risk. However, total and caffeinated coffee consumption may be associated with an increased risk of gastric cardia cancer. Further prospective studies are needed to rule out chance or confounding. PMID:25236393

  10. Comparison of soil erodibility factors in USLE, RUSLE2, EPIC and Dg models based on a Chinese soil erodibiity database.

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Soil erodibility (K-value) is a key parameter in erosion prediction and is important for conservation planning in the face of a rising need for protecting the limited land resources. This study investigated the predictive capability of the K-value estimated by Universal Soil Loss Equation (USLE), Re...

  11. 75 FR 40815 - Black Oak Energy, LLC, EPIC Merchant Energy, LP, SESCO Enterprises, LLC v. PJM Interconnection...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-07-14

    .... PJM Interconnection, LLC; Notice of Filing July 8, 2010. Take notice that on June 1, 2010, PJM Interconnection, LLC filed a report of refund pursuant to the Federal Energy Regulatory Commission's (Commission... Oak Energy, LLC, et al. v. PJM Interconnection, LLC, 131 FERC ] 61,024 (2010) (April 15 Order)....

  12. 75 FR 8322 - EPIC Merchant Energy NJ/PA, LP, SESCO Enterprises, LLC, Coaltrain Energy, LP, Complainants, v...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-02-24

    ..., Complainants, v. PJM Interconnection, LLC, Respondent; Notice of Complaint February 17, 2010. Take notice that... Enterprises, LLC, and Coaltrain Energy LP (Complainants) filed a formal complaint against PJM...

  13. Cross-sectional study of the prehospital management of adult patients with a suspected seizure (EPIC1)

    PubMed Central

    Taylor, Louise H; Shewan, Jane; Baldwin, Trevor; Grünewald, Richard A; Reuber, Markus

    2016-01-01

    Objectives Suspected seizures are a common reason for emergency calls to ambulance services. Prehospital management of these patients is an important element of good quality care. The aim of this study, conducted in a regional ambulance service in the UK, was to quantify the number of emergency telephone calls for suspected seizures in adults, the associated costs, and to describe the patients’ characteristics, their prehospital management and their immediate outcomes. Design Quantitative cross-sectional study using routinely collected data and a detailed review of the clinical records of a consecutive series of adult patients (≥16 years). Setting A regional ambulance service within the National Health Service in England. Participants Cross-sectional data from all 605 481 adult emergency incidents managed by the ambulance service from 1 April 2012 to 31 March 2013. We selected a consecutive series of 178 individual incidents from May 2012 for more detailed analysis (132 after exclusions and removal of non-seizure cases). Results Suspected seizures made up 3.3% of all emergency incidents. True medical emergencies were uncommon but 3.3% had partially occluded airways, 6.8% had ongoing seizure activity and 59.1% had clinical problems in addition to the seizure (29.1% involving injury). Emergency vehicles were dispatched for 97.2% of suspected seizures, the seizure had terminated on arrival in 93.2% of incidents, 75% of these patients were transported to hospital. The estimated emergency management cost per annum of suspected seizures in the English ambulance services is £45.2 million (€64.0 million, $68.6 million). Conclusions Many patients with suspected seizures could potentially be treated more effectively and at lower cost by modifying ambulance call handling protocols. The development of innovative care pathways could give call handlers and paramedics alternatives to hospital transportation. Increased adoption of care plans could reduce 999 calls and could increase the rates of successful home or community treatment. PMID:26908532

  14. Soil Organic Carbon Sequestration Simulated by EPIC in Cotton Rotations from Three Major Land Resource Areas in the Southeastern USA

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Sequestration of soil organic carbon (SOC) in the southeastern USA is perceived as occurring at a relatively low rate, because of the inherent low SOC content of most agricultural soils. However, recent field estimates of SOC sequestration in conservation management systems suggest that the sequest...

  15. Linking a modified EPIC-based growth model (UPGM) with a component-based watershed model (AGES-W)

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Agricultural models and decision support systems (DSS) for assessing water use and management are increasingly being applied to diverse geographic regions at different scales. This requires models that can simulate different crops, however, very few plant growth models are available that “easily” ...

  16. Alcohol consumption and the risk of renal cancers in the European prospective investigation into cancer and nutrition (EPIC).

    PubMed

    Wozniak, Magdalena B; Brennan, Paul; Brenner, Darren R; Overvad, Kim; Olsen, Anja; Tjønneland, Anne; Boutron-Ruault, Marie-Christine; Clavel-Chapelon, Françoise; Fagherazzi, Guy; Katzke, Verena; Kühn, Tilman; Boeing, Heiner; Bergmann, Manuela M; Steffen, Annika; Naska, Androniki; Trichopoulou, Antonia; Trichopoulos, Dimitrios; Saieva, Calogero; Grioni, Sara; Panico, Salvatore; Tumino, Rosario; Vineis, Paolo; Bueno-de-Mesquita, H B As; Peeters, Petra H; Hjartåker, Anette; Weiderpass, Elisabete; Arriola, Larraitz; Molina-Montes, Esther; Duell, Eric J; Santiuste, Carmen; Alonso de la Torre, Ramón; Barricarte Gurrea, Aurelio; Stocks, Tanja; Johansson, Mattias; Ljungberg, Börje; Wareham, Nick; Khaw, Kay-Tee; Travis, Ruth C; Cross, Amanda J; Murphy, Neil; Riboli, Elio; Scelo, Ghislaine

    2015-10-15

    Epidemiologic studies have reported that moderate alcohol consumption is inversely associated with the risk of renal cancer. However, there is no information available on the associations in renal cancer subsites. From 1992 through to 2010, 477,325 men and women in the European Prospective Investigation into Cancer and Nutrition cohort were followed for incident renal cancers (n = 931). Baseline and lifetime alcohol consumption was assessed by country-specific, validated dietary questionnaires. Information on past alcohol consumption was collected by lifestyle questionnaires. Hazard ratios (HRs) and 95% confidence intervals (CIs) were estimated from Cox proportional hazard models. In multivariate analysis, total alcohol consumption at baseline was inversely associated with renal cancer; the HR and 95% CI for the increasing categories of total alcohol consumption at recruitment versus the light drinkers category were 0.78 (0.62-0.99), 0.82 (0.64-1.04), 0.70 (0.55-0.90), 0.91 (0.63-1.30), respectively, (ptrend  = 0.001). A similar relationship was observed for average lifetime alcohol consumption and for all renal cancer subsites combined or for renal parenchyma subsite. The trend was not observed in hypertensive individuals and not significant in smokers. In conclusion, moderate alcohol consumption was associated with a decreased risk of renal cancer.

  17. Circulating Omentin as a Novel Biomarker for Colorectal Cancer Risk: Data from the EPIC-Potsdam Cohort Study.

    PubMed

    Aleksandrova, Krasimira; di Giuseppe, Romina; Isermann, Berend; Biemann, Ronald; Schulze, Matthias; Wittenbecher, Clemens; Fritsche, Andreas; Lehmann, Rainer; Menzel, Juliane; Weikert, Cornelia; Pischon, Tobias; Boeing, Heiner

    2016-07-01

    Omentin is a novel biomarker shown to exert metabolic, inflammatory, and immune-related properties and thereby could be implicated in the risk of colorectal cancer. So far, the association between omentin and colorectal cancer risk has not been evaluated in prospective cohort studies. We investigated the association between prediagnostic plasma omentin concentrations and risk of colorectal cancer in a case-cohort comprising 251 incident colorectal cancer cases diagnosed over a mean follow-up time of 10.4 years and 2,295 persons who remained free of cancer in the European Prospective Investigation into Cancer and Nutrition-Potsdam study. Hazard ratios as a measure of relative risk (RR) and 95% confidence intervals (CI) were computed using a Prentice-modified Cox regression. In a multivariable model adjusted for age, sex, education, dietary and lifestyle factors, body mass index (BMI), and waist circumference, higher omentin concentrations were associated with a higher colorectal cancer risk (RRcontinuously per doubling of omentin concentrations = 1.98; 95% CI, 1.45-2.73). Additional adjustment for metabolic biomarkers, including glycated hemoglobin, high-density lipoprotein cholesterol, and C-reactive protein, did not alter the results. In stratified analyses, the positive association between omentin and colorectal cancer risk was retained in participants with BMI < 30 (RRcontinuously per doubling of omentin concentrations = 2.26; 95% CI, 1.57-3.27), whereas among participants with BMI ≥ 30 no association was revealed (RRcontinuously per doubling of omentin concentrations = 1.07; 95% CI, 0.63-1.83; Pinteraction = 0.005). These novel findings provide the first lines of evidence for an independent association between prediagnostic omentin concentrations and colorectal cancer risk and suggest a potential interaction with the adiposity state of the individual. Cancer Res; 76(13); 3862-71. ©2016 AACR. PMID:27216184

  18. Pre-diagnostic polyphenol intake and breast cancer survival: the European Prospective Investigation into Cancer and Nutrition (EPIC) cohort.

    PubMed

    Kyrø, Cecilie; Zamora-Ros, Raul; Scalbert, Augustin; Tjønneland, Anne; Dossus, Laure; Johansen, Christoffer; Bidstrup, Pernille Envold; Weiderpass, Elisabete; Christensen, Jane; Ward, Heather; Aune, Dagfinn; Riboli, Elio; His, Mathilde; Clavel-Chapelon, Françoise; Baglietto, Laura; Katzke, Verena; Kühn, Tilman; Boeing, Heiner; Floegel, Anna; Overvad, Kim; Lasheras, Cristina; Travier, Noémie; Sánchez, Maria-José; Amiano, Pilar; Chirlaque, Maria-Dolores; Ardanaz, Eva; Khaw, Kay-Tee; Wareham, Nick; Perez-Cornago, Aurora; Trichopoulou, Antonia; Lagiou, Pagona; Vasilopoulou, Effie; Masala, Giovanna; Grioni, Sara; Berrino, Franco; Tumino, Rosario; Sacerdote, Carlotta; Mattiello, Amalia; Bueno-de-Mesquita, H Bas; Peeters, Petra H; van Gils, Carla; Borgquist, Signe; Butt, Salma; Zeleniuch-Jacquotte, Anne; Sund, Malin; Hjartåker, Anette; Skeie, Guri; Olsen, Anja; Romieu, Isabelle

    2015-11-01

    The aim was to investigate the association between pre-diagnostic intakes of polyphenol classes (flavonoids, lignans, phenolic acids, stilbenes, and other polyphenols) in relation to breast cancer survival (all-cause and breast cancer-specific mortality). We used data from the European Prospective Investigation into Cancer and Nutrition cohort. Pre-diagnostic usual diet was assessed using dietary questionnaires, and polyphenol intakes were estimated using the Phenol-Explorer database. We followed 11,782 breast cancer cases from time of diagnosis until death, end of follow-up or last day of contact. During a median of 6 years, 1482 women died (753 of breast cancer). We related polyphenol intake to all-cause and breast cancer-specific mortality using Cox proportional hazard models with time since diagnosis as underlying time and strata for age and country. Among postmenopausal women, an intake of lignans in the highest versus lowest quartile was related to a 28 % lower risk of dying from breast (adjusted model: HR, quartile 4 vs. quartile 1, 0.72, 95 % CI 0.53; 0.98). In contrast, in premenopausal women, a positive association between lignan intake and all-cause mortality was found (adjusted model: HR, quartile 4 vs. quartile 1, 1.63, 95 % CI 1.03; 2.57). We found no association for other polyphenol classes. Intake of lignans before breast cancer diagnosis may be related to improved survival among postmenopausal women, but may on the contrary worsen the survival for premenopausal women. This suggests that the role of phytoestrogens in breast cancer survival is complex and may be dependent of menopausal status. PMID:26531755

  19. ISS Update: Computer Upgrade on Station

    NASA Video Gallery

    NASA Public Affairs Officer Brandi Dean interviews Gary Cox, EPIC Project Manager, about EPIC (Enhanced Processor and Integrated Communications), the computer upgrade program for the International ...

  20. 77 FR 49005 - Notice of Proposed Information Collection for Public Comment; Indian Housing Block Grant (IHBG...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2012-08-15

    ...: an Excel version and a version on HUD's Energy and Performance Information Center (EPIC) Web site... the automated capabilities of the Excel and EPIC versions. These automated enhancements make the Excel... complete and submit to HUD either the Word, Excel, or EPIC versions; however, the Excel and EPIC...

  1. DEVELOPMENT OF EPIC GENETIC MARKERS AND THE UTILITY OF A MULTI-LOCUS, MULTI-TAXA PHYLOGEOGRAPHICAL APPROACH TO EXAMINING PATTERNS OF GENETIC DIVERSITY

    EPA Science Inventory

    Use of population genetic measures for assessing the structure of natural populations and the condition of biological resources has increased steadily since the 1970's. Traditionally, genetic diversity within and among geographic areas is assessed based on a one-time sampling of...

  2. Risk of second primary malignancies in women with breast cancer: Results from the European prospective investigation into cancer and nutrition (EPIC).

    PubMed

    Ricceri, Fulvio; Fasanelli, Francesca; Giraudo, Maria Teresa; Sieri, Sabina; Tumino, Rosario; Mattiello, Amalia; Vagliano, Liliana; Masala, Giovanna; Quirós, J Ramón; Travier, Noemie; Sánchez, María-José; Larranaga, Nerea; Chirlaque, María-Dolores; Ardanaz, Eva; Tjonneland, Anne; Olsen, Anja; Overvad, Kim; Chang-Claude, Jenny; Kaaks, Rudolf; Boeing, Heiner; Clavel-Chapelon, Françoise; Kvaskoff, Marina; Dossus, Laure; Trichopoulou, Antonia; Benetou, Vassiliki; Adarakis, George; Bueno-de-Mesquita, H B As; Peeters, Petra H; Sund, Malin; Andersson, Anne; Borgquist, Signe; Butt, Salma; Weiderpass, Elisabete; Skeie, Guri; Khaw, Kay-Tee; Travis, Ruth C; Rinaldi, Sabina; Romieu, Isabelle; Gunter, Marc; Kadi, Mai; Riboli, Elio; Vineis, Paolo; Sacerdote, Carlotta

    2015-08-15

    Women with a diagnosis of breast cancer are at increased risk of second primary cancers, and the identification of risk factors for the latter may have clinical implications. We have followed-up for 11 years 10,045 women with invasive breast cancer from a European cohort, and identified 492 second primary cancers, including 140 contralateral breast cancers. Expected and observed cases and Standardized Incidence Ratios (SIR) were estimated using Aalen-Johansen Markovian methods. Information on various risk factors was obtained from detailed questionnaires and anthropometric measurements. Cox proportional hazards regression models were used to estimate the role of risk factors. Women with breast cancer had a 30% excess risk for second malignancies (95% confidence interval-CI 18-42) after excluding contralateral breast cancers. Risk was particularly elevated for colorectal cancer (SIR, 1.71, 95% CI 1.43-2.00), lymphoma (SIR 1.80, 95% CI 1.31-2.40), melanoma (2.12; 1.63-2.70), endometrium (2.18; 1.75-2.70) and kidney cancers (2.40; 1.57-3.52). Risk of second malignancies was positively associated with age at first cancer, body mass index and smoking status, while it was inversely associated with education, post-menopausal status and a history of full-term pregnancy. We describe in a large cohort of women with breast cancer a 30% excess of second primaries. Among risk factors for breast cancer, a history of full-term pregnancy was inversely associated with the risk of second primary cancer.

  3. Proportion of premenopausal and postmenopausal breast cancers attributable to known risk factors: Estimates from the E3N-EPIC cohort.

    PubMed

    Dartois, Laureen; Fagherazzi, Guy; Baglietto, Laura; Boutron-Ruault, Marie-Christine; Delaloge, Suzette; Mesrine, Sylvie; Clavel-Chapelon, Françoise

    2016-05-15

    Breast cancer is the most frequently diagnosed cancer among women worldwide. Breast cancer risk factors have been widely explored individually; however, little is known about their combined impact. We included 67,634 women from the French E3N prospective cohort, aged 42-72 at baseline. During a 15-year follow-up period, 497 premenopausal and 3,138 postmenopausal invasive breast cancer cases were diagnosed. Population-attributable fractions (PAFs) were used to estimate cases proportions attributable to risk factors under hypothetical scenarios of lowest exposure. We examined overall premenopausal and postmenopausal invasive breast cancers and tumour subtypes (ER status and HER2 expression). Premenopausal breast cancer was not significantly attributable to non-behavioral (61.2%, -15.5 to 91.88%) nor to behavioral (39.9%, -71.0 to 93.9%) factors, contrary to postmenopausal breast cancer (41.9%, 4.5 to 68.7% and 53.5%, 12.8 to 78.7%, respectively). Individually, the highest statistically significant PAFs were obtained in premenopause for birth weight (33.6%, 5.7 to 56.6%) and age at menarche (19.8%, 5.2 to 33.6%) for non-behavioral factors and in postmenopause for history of benign breast diseases (14.9%, 11.6 to 18.0%) and age at menarche (9.7%, 3.9 to 15.5%) for non-behavioral factors and for body shape at menarche (17.1%, 9.7 to 24.3%), use of hormone replacement therapy (14.5%, 9.2 to 19.6%), dietary pattern (10.1%, 2.6 to 17.4%) and alcohol consumption (5.6%, 1.9 to 9.3%) for behavioral factors. These proportions were higher for ER+, HER2- and ER+/HER2- postmenopausal breast cancers. Our data support the hypothesis that in postmenopause, never starting unhealthy behaviors can reduce the number of diagnosed breast cancers. PMID:26756677

  4. Crowdsourcing as a Novel Technique for Retinal Fundus Photography Classification: Analysis of Images in the EPIC Norfolk Cohort on Behalf of the UKBiobank Eye and Vision Consortium

    PubMed Central

    Mitry, Danny; Peto, Tunde; Hayat, Shabina; Morgan, James E.; Khaw, Kay-Tee; Foster, Paul J.

    2013-01-01

    Aim Crowdsourcing is the process of outsourcing numerous tasks to many untrained individuals. Our aim was to assess the performance and repeatability of crowdsourcing for the classification of retinal fundus photography. Methods One hundred retinal fundus photograph images with pre-determined disease criteria were selected by experts from a large cohort study. After reading brief instructions and an example classification, we requested that knowledge workers (KWs) from a crowdsourcing platform classified each image as normal or abnormal with grades of severity. Each image was classified 20 times by different KWs. Four study designs were examined to assess the effect of varying incentive and KW experience in classification accuracy. All study designs were conducted twice to examine repeatability. Performance was assessed by comparing the sensitivity, specificity and area under the receiver operating characteristic curve (AUC). Results Without restriction on eligible participants, two thousand classifications of 100 images were received in under 24 hours at minimal cost. In trial 1 all study designs had an AUC (95%CI) of 0.701(0.680–0.721) or greater for classification of normal/abnormal. In trial 1, the highest AUC (95%CI) for normal/abnormal classification was 0.757 (0.738–0.776) for KWs with moderate experience. Comparable results were observed in trial 2. In trial 1, between 64–86% of any abnormal image was correctly classified by over half of all KWs. In trial 2, this ranged between 74–97%. Sensitivity was ≥96% for normal versus severely abnormal detections across all trials. Sensitivity for normal versus mildly abnormal varied between 61–79% across trials. Conclusions With minimal training, crowdsourcing represents an accurate, rapid and cost-effective method of retinal image analysis which demonstrates good repeatability. Larger studies with more comprehensive participant training are needed to explore the utility of this compelling technique in large scale medical image analysis. PMID:23990935

  5. Risk of second primary malignancies in women with breast cancer: Results from the European prospective investigation into cancer and nutrition (EPIC).

    PubMed

    Ricceri, Fulvio; Fasanelli, Francesca; Giraudo, Maria Teresa; Sieri, Sabina; Tumino, Rosario; Mattiello, Amalia; Vagliano, Liliana; Masala, Giovanna; Quirós, J Ramón; Travier, Noemie; Sánchez, María-José; Larranaga, Nerea; Chirlaque, María-Dolores; Ardanaz, Eva; Tjonneland, Anne; Olsen, Anja; Overvad, Kim; Chang-Claude, Jenny; Kaaks, Rudolf; Boeing, Heiner; Clavel-Chapelon, Françoise; Kvaskoff, Marina; Dossus, Laure; Trichopoulou, Antonia; Benetou, Vassiliki; Adarakis, George; Bueno-de-Mesquita, H B As; Peeters, Petra H; Sund, Malin; Andersson, Anne; Borgquist, Signe; Butt, Salma; Weiderpass, Elisabete; Skeie, Guri; Khaw, Kay-Tee; Travis, Ruth C; Rinaldi, Sabina; Romieu, Isabelle; Gunter, Marc; Kadi, Mai; Riboli, Elio; Vineis, Paolo; Sacerdote, Carlotta

    2015-08-15

    Women with a diagnosis of breast cancer are at increased risk of second primary cancers, and the identification of risk factors for the latter may have clinical implications. We have followed-up for 11 years 10,045 women with invasive breast cancer from a European cohort, and identified 492 second primary cancers, including 140 contralateral breast cancers. Expected and observed cases and Standardized Incidence Ratios (SIR) were estimated using Aalen-Johansen Markovian methods. Information on various risk factors was obtained from detailed questionnaires and anthropometric measurements. Cox proportional hazards regression models were used to estimate the role of risk factors. Women with breast cancer had a 30% excess risk for second malignancies (95% confidence interval-CI 18-42) after excluding contralateral breast cancers. Risk was particularly elevated for colorectal cancer (SIR, 1.71, 95% CI 1.43-2.00), lymphoma (SIR 1.80, 95% CI 1.31-2.40), melanoma (2.12; 1.63-2.70), endometrium (2.18; 1.75-2.70) and kidney cancers (2.40; 1.57-3.52). Risk of second malignancies was positively associated with age at first cancer, body mass index and smoking status, while it was inversely associated with education, post-menopausal status and a history of full-term pregnancy. We describe in a large cohort of women with breast cancer a 30% excess of second primaries. Among risk factors for breast cancer, a history of full-term pregnancy was inversely associated with the risk of second primary cancer. PMID:25650288

  6. DSCOVR/EPIC Images and Science: A New Way to View the Entire Sunlit Earth From A Sun-Earth Lagrange-1 Orbit

    NASA Astrophysics Data System (ADS)

    Herman, J. R.; Marshak, A.; Szabo, A.

    2015-12-01

    The DSCOVR mission was launched into a Sun-Earth Lagrange-1 orbit 1.5 million kilometers from earth in February 2015 onboard a SpaceX Falcon-9 rocket. The solar wind and earth science instruments were tested during the 4.5 month journey to L-1. The first data were obtained during the June-July commissioning phase, which included the first moderate resolution (10 km) color images of the entire sunlit earth, color images of the Moon, and scientific data from 10 narrow band filters (317.5, 325, 340, 388, 443, 551, 680, 687.75, 764, and 779.5 nm). Three of these filters were used to construct the color images (443, 551, 680 nm) based on the average eye response histogram of the sunlit earth. This talk will discuss some of the issues involved in deriving science quality data for global ozone, the aerosol index (dust, smoke, and volcanic ash), cloud amounts and reflectivity, and cloud height (measured from the O2 A- and B-bands). As with most new satellites, the science data are preliminary.

  7. Systematic evaluation of patient-reported outcome (PRO) protocol content and reporting in UK cancer clinical trials: the EPiC study protocol

    PubMed Central

    Ahmed, Khaled; Kyte, Derek; Keeley, Thomas; Efficace, Fabio; Armes, Jo; Brown, Julia M; Calman, Lynn; Copland, Chris; Gavin, Anna; Glaser, Adam; Greenfield, Diana M; Lanceley, Anne; Taylor, Rachel; Velikova, Galina; Brundage, Michael; Mercieca-Bebber, Rebecca; King, Madeleine T

    2016-01-01

    Introduction Emerging evidence suggests that patient-reported outcome (PRO)-specific information may be omitted in trial protocols and that PRO results are poorly reported, limiting the use of PRO data to inform cancer care. This study aims to evaluate the standards of PRO-specific content in UK cancer trial protocols and their arising publications and to highlight examples of best-practice PRO protocol content and reporting where they occur. The objective of this study is to determine if these early findings are generalisable to UK cancer trials, and if so, how best we can bring about future improvements in clinical trials methodology to enhance the way PROs are assessed, managed and reported. Hypothesis: Trials in which the primary end point is based on a PRO will have more complete PRO protocol and publication components than trials in which PROs are secondary end points. Methods and analysis Completed National Institute for Health Research (NIHR) Portfolio Cancer clinical trials (all cancer specialities/age-groups) will be included if they contain a primary/secondary PRO end point. The NIHR portfolio includes cancer trials, supported by a range of funders, adjudged as high-quality clinical research studies. The sample will be drawn from studies completed between 31 December 2000 and 1 March 2014 (n=1141) to allow sufficient time for completion of the final trial report and publication. Two reviewers will then review the protocols and arising publications of included trials to: (1) determine the completeness of their PRO-specific protocol content; (2) determine the proportion and completeness of PRO reporting in UK Cancer trials and (3) model factors associated with PRO protocol and reporting completeness and with PRO reporting proportion. Ethics and dissemination The study was approved by the ethics committee at University of Birmingham (ERN_15-0311). Trial findings will be disseminated via presentations at local, national and international conferences, peer-reviewed journals and social media including the CPROR twitter account and UOB departmental website (http://www.birmingham.ac.uk/cpro0r). Trial registration number PROSPERO CRD42016036533. PMID:27655263

  8. Plasma alkylresorcinol concentrations, biomarkers of whole-grain wheat and rye intake, in the European Prospective Investigation into Cancer and Nutrition (EPIC) cohort.

    PubMed

    Kyrø, Cecilie; Olsen, Anja; Bueno-de-Mesquita, H B As; Skeie, Guri; Loft, Steffen; Åman, Per; Leenders, Max; Dik, Vincent K; Siersema, Peter D; Pischon, Tobias; Christensen, Jane; Overvad, Kim; Boutron-Ruault, Marie-Christine; Fagherazzi, Guy; Cottet, Vanessa; Kühn, Tilman; Chang-Claude, Jenny; Boeing, Heiner; Trichopoulou, Antonia; Naska, Androniki; Oikonomidou, Despoina; Masala, Giovanna; Pala, Valeria; Tumino, Rosario; Vineis, Paolo; Mattiello, Amalia; Peeters, Petra H; Bakken, Toril; Weiderpass, Elisabete; Asli, Lene Angell; Sánchez, Soledad; Jakszyn, Paula; Sánchez, María-José; Amiano, Pilar; Huerta, José María; Barricarte, Aurelio; Ljuslinder, Ingrid; Palmqvist, Richard; Khaw, Kay-Tee; Wareham, Nick; Key, Timothy J; Travis, Ruth C; Slimani, Nadia; Freisling, Heinz; Ferrari, Pietro; Gunter, Marc J; Murphy, Neil; Riboli, Elio; Tjønneland, Anne; Landberg, Rikard

    2014-05-28

    Whole-grain intake has been reported to be associated with a lower risk of several lifestyle-related diseases such as type 2 diabetes, CVD and some types of cancers. As measurement errors in self-reported whole-grain intake assessments can be substantial, dietary biomarkers are relevant to be used as complementary tools for dietary intake assessment. Alkylresorcinols (AR) are phenolic lipids found almost exclusively in whole-grain wheat and rye products among the commonly consumed foods and are considered as valid biomarkers of the intake of these products. In the present study, we analysed the plasma concentrations of five AR homologues in 2845 participants from ten European countries from a nested case-control study in the European Prospective Investigation into Cancer and Nutrition. High concentrations of plasma total AR were found in participants from Scandinavia and Central Europe and lower concentrations in those from the Mediterranean countries. The geometric mean plasma total AR concentrations were between 35 and 41 nmol/l in samples drawn from fasting participants in the Central European and Scandinavian countries and below 23 nmol/l in those of participants from the Mediterranean countries. The whole-grain source (wheat or rye) could be determined using the ratio of two of the homologues. The main source was wheat in Greece, Italy, the Netherlands and the UK, whereas rye was also consumed in considerable amounts in Germany, Denmark and Sweden. The present study demonstrates a considerable variation in the plasma concentrations of total AR and concentrations of AR homologues across ten European countries, reflecting both quantitative and qualitative differences in the intake of whole-grain wheat and rye.

  9. Experiment definition and integration study for the accommodation of giant, passive detector of Exotic Particles In the Cosmic Rays (EPIC) payload on shuttle/spacelab missions

    NASA Technical Reports Server (NTRS)

    Price, P. B.

    1978-01-01

    The feasibility of the design, construction, launch and retrieval of a hinged 15 ft by 110 ft the platform containing an array of interleaved CR-39 and Lexan track-recording detectors to be placed into circular orbit by space shuttle is assessed. The total weight of the detector assembly plus supporting structure and accessories is 32,000 pounds. The modular construction permits as little as one fourth of the payload to be exposed at one time. The CR-39 detector has sensitivity adequate to detect and study cosmic rays ranging from minimum ionizing iron-group nuclei to the heaviest elements. The detectors will survive a one year exposure to trapped protons without losing their high resolution. Advantages include low cost, huge collecting power (approximately 150 sq m) as well as the high resolution previously attainable only with electronic detectors.

  10. Designing Spacecraft and Mission Operations Plans to Meet Flight Crew Radiation Dose Requirements: Why is this an "Epic Challenge" for Long-Term Manned Interplanetary Flight

    NASA Technical Reports Server (NTRS)

    Koontz, Steven

    2012-01-01

    Outline of presentation: (1) Radiation Shielding Concepts and Performance - Galactic Cosmic Rays (GCRs) (1a) Some general considerations (1b) Galactic Cosmic Rays (2)GCR Shielding I: What material should I use and how much do I need? (2a) GCR shielding materials design and verification (2b) Spacecraft materials point dose cosmic ray shielding performance - hydrogen content and atomic number (2c) Accelerator point dose materials testing (2d) Material ranking and selection guidelines (2e) Development directions and return on investment (point dose metric) (2f) Secondary particle showers in the human body (2f-1) limited return of investment for low-Z, high-hydrogen content materials (3) GCR shielding II: How much will it cost? (3a) Spacecraft design and verification for mission radiation dose to the crew (3b) Habitat volume, shielding areal density, total weight, and launch cost for two habitat volumes (3c) It's All about the Money - Historical NASA budgets and budget limits (4) So, what can I do about all this? (4a) Program Design Architecture Trade Space (4b) The Vehicle Design Trade Space (4c) Some Near Term Recommendations

  11. Epic Allies: Development of a Gaming App to Improve Antiretroviral Therapy Adherence Among Young HIV-Positive Men Who Have Sex With Men

    PubMed Central

    Muessig, Kathryn Elizabeth; McNulty, Tobias; Soni, Karina; Knudtson, Kelly; Lemann, Alex; Nwoko, Nkechinyere; Hightow-Weidman, Lisa B

    2016-01-01

    Background In the United States, the human immunodeficiency virus (HIV) disproportionately affects young men who have sex with men (YMSM). For HIV-positive individuals, adherence to antiretroviral therapy (ART) is critical for achieving optimal health outcomes and reducing secondary transmission of HIV. However, YMSM often struggle with ART adherence. Novel mobile phone apps that incorporate game-based mechanics and social networking elements represent a promising intervention approach for improving ART adherence among YMSM. Objective This study used a multiphase, iterative development process to create an ART adherence app for YMSM. Methods The three-phase development process included: (1) theory-based concept development jointly by public health researchers and the technology team, (2) assessment of the target population’s ART adherence needs and app preferences and development and testing of a clickable app prototype, and (3) development and usability testing of the final app prototype. Results The initial theory-based app concept developed in Phase One included medication reminders, daily ART adherence tracking and visualization, ART educational modules, limited virtual interactions with other app users, and gamification elements. In Phase Two, adherence needs, including those related to information, motivation, and behavioral skills, were identified. Participants expressed preferences for an ART adherence app that was informational, interactive, social, and customizable. Based on the findings from Phase Two, additional gaming features were added in Phase Three, including an interactive battle, superhero app theme, and app storyline. Other features were modified to increase interactivity and customization options and integrate the game theme. During usability testing of the final prototype, participants were able to understand and navigate the app successfully and rated the app favorably. Conclusions An iterative development process was critical for the development of an ART adherence game app that was viewed as highly acceptable, relevant, and useful by YMSM. PMID:27178752

  12. EPIC-Simulated and MODIS-Derived Leaf Area Index (LAI) Comparisons Across mMltiple Spatial Scales RSAD Oral Poster based session

    EPA Science Inventory

    Leaf Area Index (LAI) is an important parameter in assessing vegetation structure for characterizing forest canopies over large areas at broad spatial scales using satellite remote sensing data. However, satellite-derived LAI products can be limited by obstructed atmospheric cond...

  13. Mana Wahine, Education and Nation-Building: Lessons from the Epic of Pele and Hi'iaka for Kanaka Maoli Today

    ERIC Educational Resources Information Center

    Ho'omanawanui, Ku'ualoha

    2010-01-01

    Hawai'i is a small place on a large planet; Kanaka Maoli, the Indigenous people of the islands, today comprise just 20% of the total population within the state, and less than 1% of the total U.S. population across the nation (U.S. Census Bureau, n.d.). Yet Hawai'i, promoted for centuries as an exotic tourist destination, and Hawaiian culture as…

  14. Learning Communities via the Internet a la Epic Learning: You Can Lead the Horses to Water, but You Cannot Get Them To Drink.

    ERIC Educational Resources Information Center

    Orey, Michael; Koenecke, Lynne; Crozier, Jane

    2003-01-01

    Describes learning experiences of three students enrolled in a training company's Web-based course on network administration that included a variety of online technologies, including a live virtual classroom, coaches, chat, and bulletin boards, to try and develop an online learning community. Concludes that learners must be taught how to form…

  15. The EPICS Trial: Enabling Parents to Increase Child Survival through the introduction of community-based health interventions in rural Guinea Bissau

    PubMed Central

    Mann, Vera; Fazzio, Ila; King, Rebecca; Walker, Polly; dos Santos, Albino; Carlos de Sa, Jose; Jayanti, Chitra; Frost, Chris; Elbourne, Diana; Boone, Peter

    2009-01-01

    Background Guinea-Bissau is a small country in West Africa with a population of 1.7 million. The WHO and UNICEF reported an under-five child mortality of 203 per 1000, the 10th highest amongst 192 countries. The aim of the trial is to assess whether an intervention package that includes community health promotion campaign and education through health clubs, intensive training and mentoring of village health workers to diagnose and provide first-line treatment for children's diseases within the community, and improved outreach services can generate a rapid and cost-effective reduction in under-five child mortality in rural regions of Guinea-Bissau. Effective Intervention plans to expand the project to a much larger region if there is good evidence after two and a half years that the project is generating a cost-effective, sustainable reduction in child mortality. Methods/design This trial is a cluster-randomised controlled trial involving 146 clusters. The trial will run for 2.5 years. The interventions will be introduced in two stages: seventy-three clusters will receive the interventions at the start of the project, and seventy-three control clusters will receive the interventions 2.5 years after the first clusters have received all interventions if the research shows that the interventions are effective. The impact of the interventions and cost-effectiveness will be measured during the first stage. The package of interventions includes a community health promotion campaign and education through health clubs, and intensive training and mentoring of village health workers to diagnose and provide first-line treatment for common children's diseases within the community. It also includes improved outreach services to encourage provision of antenatal and post natal care and provide ongoing monitoring for village health workers. The primary outcome of the trial will be the proportion of children that die under 5 years of age during the trial. Secondary outcomes will include age at and cause of child deaths, neonatal mortality, infant mortality, maternal mortality, health knowledge, health seeking behaviour, morbidity and costs. Discussion The trial will be run by research and service delivery teams that act independently, overseen by a trial steering committee. A data monitoring committee will be appointed to monitor the outcome and any adverse effects. Trial Registration Current Controlled Trials ISRCTN52433336 PMID:19650919

  16. Migration of 1970s Minicomputer Controls to Modern Toolkit Software

    SciTech Connect

    Juras, R.C.; Meigs, M.J.; Sinclair, J.A.; Tatum, B.A.

    1999-11-13

    Controls for accelerators and associated systems at the Holifield Radioactive Ion Beam Facility (HRIBF) at Oak Ridge National Laboratory have been migrated from 197Os-vintage minicomputers to a modern system based on Vista and EPICS toolkit software. Stability and capabilities of EPICS software have motivated increasing use of EPICS for accelerator controls. In addition, very inexpensive subsystems based on EPICS and the EPICS portable CA server running on Linux PCs have been implemented to control an ion source test facility and to control a building-access badge reader system. A new object-oriented, extensible display manager has been developed for EPICS to facilitate the transition to EPICS and will be used in place of MEDM. EPICS device support has been developed for CAMAC serial highway controls.

  17. The Blue Marble 43 Years Later

    Atmospheric Science Data Center

    2016-02-18

    ... provided by the Earth Polychromatic Imaging Camera (EPIC) sensor affixed to the Deep Space Climate Observatory (DSCOVR). For more ... provided by the Earth Polychromatic Imaging Camera (EPIC) sensor affixed to the Deep Space Climate Observatory (DSCOVR). READ MORE ...

  18. Exploring the Role of Elementary Parent Involvement Coordinators in a North Georgia Title I Charter School District

    ERIC Educational Resources Information Center

    Elrod, Philip

    2015-01-01

    This study explored the role of elementary parent involvement coordinators (EPIC) in a Northeast Georgia Title I Charter School District. EPICs were charged with facilitating programs designed to build social capital and network closure for families. This nested case study explored the experiences of five EPICs, each located in one of the five…

  19. Reflections on the Gathering: Participatory Worlds.

    ERIC Educational Resources Information Center

    Briccetti, Lee; Zeitlin, Steve

    2003-01-01

    Offers a mediation on the 2003 People's Poetry Gathering. Includes two writers' thoughts on epics and ballads. Contends that the themes of epics remain relevant, yet there must always be a gap between the modern reader and the ancient epic singer. Proposes that studying folklore and finding ways to preserve and present older forms in innovative…

  20. Experimental Physics and Industrial Control System BASE

    2002-08-01

    EPICS is a set of software tools and applications developed initially by the Los Alamos National Laboratories for the control of large accelerators, enhanced by contributions from users worldwide and continuing development for application to other large scientific experimental equipment, such as telescopes and detectors. EPICS consists of EPICS BASE, Extensions, and other unbundled modules. EPICS BASE marks a change in the handling of the distribution of the software starting with the EPICS BASE 3.13.7more » AND 3.140beta2 software.« less

  1. Calcaneum broadband ultrasound attenuation relates to vegetarian and omnivorous diets differently in men and women: an observation from the European Prospective Investigation into Cancer in Norfolk (EPIC-Norfolk) population study.

    PubMed

    Welch, Ailsa; Bingham, Sheila; Camus, Joanna; Dalzell, Nichola; Reeve, Jonathan; Day, Nick; Khaw, K T

    2005-06-01

    Vegetarian diets have been suggested to be beneficial for bone health due to increased consumption of plant foods, including soya, or reduced consumption of meat. However, meat may also be beneficial for bone health. The evidence relating diet to bone health is based largely on studies of women, often in those at high risk of osteoporosis. Few studies have investigated dietary inter-relationships in men as well as women from general populations. We examined broadband ultrasound attenuation (BUA) of the calcaneum, using a CUBA clinical instrument, in 6,369 men and 5,379 postmenopausal women. The population was divided into four groups according to vegetarian status and frequency of soya consumption, which was defined by response to a food frequency questionnaire that estimates frequency of consumption of food types over the year prior to completion. Regular soya consumers were defined as those who ate soya products with a frequency of between once a day and once a week. Calcaneum BUA in vegetarian men was significantly lower than omnivores by approximately 6% (5 dB/MHz) and was 15% (13.6 dB/MHz) lower in those who were also regular soya consumers. This difference remained after adjustment for age, height, weight, smoking habit, physical activity, selected foods and nutrients and exclusion of those with a prior history of osteoporosis, fractures or cancer. Calcaneum BUA in omnivorous men with regular soya consumption was not lower than the remaining population. In women, there were no significant differences by usual dietary pattern. This surprising finding indicates that regular soya intake is not associated with better bone indices in vegetarian men. The difference in BUA was not explained by the known common covariates; however, it is possible that other aspects of lifestyle associated with these eating behaviors might explain this observation. Plausible mechanisms exist for our findings; soya contains phytoestrogens, likened to naturally occurring estrogens, and meat has been shown to influence levels of IGF-1 and sex hormone binding globulin, which may be related to bone health. Our findings emphasize the need for further research and investigation into dietary inter-relationships and bone health and the effects of vegetarian status, including consumption of soya-based foods, in men as well as women.

  2. Plasma concentrations and intakes of amino acids in male meat-eaters, fish-eaters, vegetarians and vegans: a cross-sectional analysis in the EPIC-Oxford cohort

    PubMed Central

    Schmidt, J A; Rinaldi, S; Scalbert, A; Ferrari, P; Achaintre, D; Gunter, M J; Appleby, P N; Key, T J; Travis, R C

    2016-01-01

    Background/Objectives: We aimed to investigate the differences in plasma concentrations and in intakes of amino acids between male meat-eaters, fish-eaters, vegetarians and vegans in the Oxford arm of the European Prospective Investigation into Cancer and Nutrition. Subjects/Methods: This cross-sectional analysis included 392 men, aged 30–49 years. Plasma amino acid concentrations were measured with a targeted metabolomic approach using mass spectrometry, and dietary intake was assessed using a food frequency questionnaire. Differences between diet groups in mean plasma concentrations and intakes of amino acids were examined using analysis of variance, controlling for potential confounding factors and multiple testing. Results: In plasma, concentrations of 6 out of 21 amino acids varied significantly by diet group, with differences of −13% to +16% between meat-eaters and vegans. Concentrations of methionine, tryptophan and tyrosine were highest in fish-eaters and vegetarians, followed by meat-eaters, and lowest in vegans. A broadly similar pattern was seen for lysine, whereas alanine concentration was highest in fish-eaters and lowest in meat-eaters. For glycine, vegans had the highest concentration and meat-eaters the lowest. Intakes of all 18 dietary amino acids differed by diet group; for the majority of these, intake was highest in meat-eaters followed by fish-eaters, then vegetarians and lowest in vegans (up to 47% lower than in meat-eaters). Conclusions: Men belonging to different habitual diet groups have significantly different plasma concentrations of lysine, methionine, tryptophan, alanine, glycine and tyrosine. However, the differences in plasma concentrations were less marked than and did not necessarily mirror those seen for amino acid intakes. PMID:26395436

  3. Combined experimental and numerical approach to evaluate impact scaling relations and reproducibility of craters produced at the Experimental Projectile Impact Chamber (E.P.I.C., Centro de Astrobiología, Spain.)

    NASA Astrophysics Data System (ADS)

    Ormö, J.; Wünnemann, K.; Collins, G.; Melero Asensio, I.

    2012-04-01

    The Experimental Projectile Impact Chamber at Centro de Astrobiología, Spain, consists of a 7m wide, funnel-shaped test bed, and a 20.5mm caliber compressed N2 gas gun. The test bed can be filled with any type of target material, but is especially designed for wet target experiments. The shape and size aim to decrease disturbance from reflected surface waves in wet target experiments. Experiments are done under 1Atm pressure. The gas gun can launch projectiles of any material and dimensions <20mm (smaller diameters using sabots), and at any angle from vertical to near horizontal. The projectile velocities are of the order of a few hundreds of meters per second depending mainly on the gas pressure, as well as projectile diameter and density. When using a dry sand target a transient crater about 30cm wide is produced. Wet target experiments have not yet been performed in this newly installed test chamber, but transient cavities in water are expected to be in the order of 50-70cm wide. The large scale allows for detailed study of the dynamics of cratering motions during the stages of crater growth and subsequent collapse, especially in wet targets. These observations provide valuable benchmark data for numerical simulations and for comparison with field studies. Here we describe the results of ten impact experiments using three different gas pressures (100bar, 180bar, 200bar), two projectile compositions (20mm, 5.7g delrin; 20mm, 16.3g Al2O3), and two different impact angles (90˚ and 53˚ over the horizontal plane). Nine of the experiments were done in a quarter-space geometry using a specially designed camera tank with a 45mm thick glass window. One experiment was done in half-space geometry as reference. The experiments were recorded with a high-speed digital video camera, and the resulting craters were documented with a digital still frame camera. Projectile velocities are estimated with a combination of tracking software and a Shooting Chrony Alpha M-1 chronograph to be about 330m/s for delrin (100bar), 220m/s for Al2O3 (100bar), 400m/s for delrin (200bar), and 275m/s for Al2O3 (200bar). The velocities for the lighter delrin projectile and at the higher pressure are above the speed of sound in dry silica sand (243 m/s; Sandia report SAND2007-3524). The experimental set up (i.e. target material, projectile density and velocity, impact angle), as well as the dimensions of the resulting craters, are used as inputs in numerical simulation using the iSALE computational code. Results from these simulations will be presented and compared with the experiments.

  4. Ecological-level associations between highly processed food intakes and plasma phospholipid elaidic acid concentrations: results from a cross-sectional study within the European prospective investigation into cancer and nutrition (EPIC).

    PubMed

    Chajès, Véronique; Biessy, Carine; Byrnes, Graham; Deharveng, Geneviève; Saadatian-Elahi, Mitra; Jenab, Mazda; Peeters, Petra H M; Ocké, Marga; Bueno-de-Mesquita, H Bas; Johansson, Ingegerd; Hallmans, Göran; Manjer, Jonas; Wirfält, Elisabet; Jakszyn, Paula; González, Carlos A; Huerta, Jose-Maria; Martinez, Carmen; Amiano, Pilar; Suárez, Laudina Rodriguez; Ardanaz, Eva; Tjønneland, Anne; Halkjaer, Jytte; Overvad, Kim; Jakobsen, Marianne Uhre; Berrino, Franco; Pala, Valeria; Palli, Domenico; Tumino, Rosario; Vineis, Paolo; de Magistris, Maria Santucci; Spencer, Elisabeth A; Crowe, Francesca L; Bingham, Sheila; Khaw, Kay-Tee; Linseisen, Jakob; Rohrmann, Sabine; Boeing, Heiner; Nöethlings, Ute; Olsen, Karina Standahl; Skeie, Guri; Lund, Eiliv; Trichopoulou, Antonia; Zilis, Dimosthenis; Oustoglou, Erifili; Clavel-Chapelon, Françoise; Riboli, Elio; Slimani, Nadia

    2011-11-01

    Elaidic acid is the main unnatural trans fatty acid isomer occurring during partial hydrogenation of vegetable oils used as ingredients for the formulation of processed foods. The main objective is to assess associations between processed food intakes and plasma phospholipid elaidic acid concentrations within the European Prospective Investigation into Cancer and Nutrition study. A cross-sectional study was used to determine fatty acid profiles in 3,003 subjects from 16 centers. Single 24-h dietary recalls (24-HDR) were collected using a standardized computerized interview program. Food intakes were computed according to their degree of processing (moderately/nonprocessed foods, processed staple foods, highly processed foods). Adjusted ecological and individual correlations were calculated between processed food intakes and plasma elaidic acid levels. At the population level, mean intakes of highly processed foods were strongly correlated with mean levels of plasma elaidic acid in men (P = 0.0016) and in women (P = 0.0012). At the individual level, these associations remained but at a much lower level in men (r = 0.08, P = 0.006) and in women (r = 0.09, P = 0.0001). The use of an averaged 24-HDR measure of highly processed food intakes is adequate for predicting mean levels of plasma elaidic acid among European populations.

  5. Physical activity and all-cause mortality across levels of overall and abdominal adiposity in European men and women: the European Prospective Investigation into Cancer and Nutrition Study (EPIC)123456

    PubMed Central

    Ward, Heather A; Norat, Teresa; Luan, Jian’an; May, Anne M; Weiderpass, Elisabete; Sharp, Stephen J; Overvad, Kim; Østergaard, Jane Nautrup; Tjønneland, Anne; Johnsen, Nina Føns; Mesrine, Sylvie; Fournier, Agnès; Fagherazzi, Guy; Trichopoulou, Antonia; Lagiou, Pagona; Trichopoulos, Dimitrios; Li, Kuanrong; Kaaks, Rudolf; Ferrari, Pietro; Licaj, Idlir; Jenab, Mazda; Bergmann, Manuela; Boeing, Heiner; Palli, Domenico; Sieri, Sabina; Panico, Salvatore; Tumino, Rosario; Vineis, Paolo; Peeters, Petra H; Monnikhof, Evelyn; Bueno-de-Mesquita, H Bas; Quirós, J Ramón; Agudo, Antonio; Sánchez, María-José; Huerta, José María; Ardanaz, Eva; Arriola, Larraitz; Hedblad, Bo; Wirfält, Elisabet; Sund, Malin; Johansson, Mattias; Key, Timothy J; Travis, Ruth C; Khaw, Kay-Tee; Brage, Søren; Wareham, Nicholas J; Riboli, Elio

    2015-01-01

    Background: The higher risk of death resulting from excess adiposity may be attenuated by physical activity (PA). However, the theoretical number of deaths reduced by eliminating physical inactivity compared with overall and abdominal obesity remains unclear. Objective: We examined whether overall and abdominal adiposity modified the association between PA and all-cause mortality and estimated the population attributable fraction (PAF) and the years of life gained for these exposures. Design: This was a cohort study in 334,161 European men and women. The mean follow-up time was 12.4 y, corresponding to 4,154,915 person-years. Height, weight, and waist circumference (WC) were measured in the clinic. PA was assessed with a validated self-report instrument. The combined associations between PA, BMI, and WC with mortality were examined with Cox proportional hazards models, stratified by center and age group, and adjusted for sex, education, smoking, and alcohol intake. Center-specific PAF associated with inactivity, body mass index (BMI; in kg/m2) (>30), and WC (≥102 cm for men, ≥88 cm for women) were calculated and combined in random-effects meta-analysis. Life-tables analyses were used to estimate gains in life expectancy for the exposures. Results: Significant interactions (PA × BMI and PA × WC) were observed, so HRs were estimated within BMI and WC strata. The hazards of all-cause mortality were reduced by 16–30% in moderately inactive individuals compared with those categorized as inactive in different strata of BMI and WC. Avoiding all inactivity would theoretically reduce all-cause mortality by 7.35% (95% CI: 5.88%, 8.83%). Corresponding estimates for avoiding obesity (BMI >30) were 3.66% (95% CI: 2.30%, 5.01%). The estimates for avoiding high WC were similar to those for physical inactivity. Conclusion: The greatest reductions in mortality risk were observed between the 2 lowest activity groups across levels of general and abdominal adiposity, which suggests that efforts to encourage even small increases in activity in inactive individuals may be beneficial to public health. PMID:25733647

  6. Reflections upon an "Atheist Epic": Madalyn Murray O'Hair and "Baltimore Sun" Reporters Comment about Coverage of the First Incidents Leading to the Supreme Court's Banning of Compulsory Prayer in Public Schools.

    ERIC Educational Resources Information Center

    Bowman, Jim; Kahan, Bob

    In 1960 a teenage boy, Bill Murray, refused to participate in Bible reading, and the result was a series of court cases that culminated in the 1963 United States Supreme Court decision banning compulsory prayer in public schools. To gain insight into the dynamics of journalism practiced during controversy, a case study attempts to examine the…

  7. Status of the Experimental Physics and Industrial Control System at NSTX

    SciTech Connect

    P. Sichta; J. Dong

    2002-01-28

    The NSTX achieved first plasma in 1999. The Experimental Physics and Industrial Control System (EPICS) is used to provide data-integration services for monitoring and control of all NSTX engineering subsystems. EPICS is a set of software initially developed at U.S. DOE laboratories. It is currently used and maintained through a global collaboration of hundreds of scientists and engineers. This paper will relate some of our experiences using and supporting the EPICS software. Topics include reliability and maintainability, lessons learned, recently added engineering subsystems, new EPICS software tools, and a review of our first EPICS software upgrade. Steps to modernize the technical infrastructure of EPICS to ensure effective support for NSTX will also be described.

  8. PC-based input/output controllers from a VME perspective

    SciTech Connect

    Hill, J.O.

    1999-04-01

    The Experimental Physics and Industrial Control System (EPICS) has been widely adopted in the accelerator community. Although EPICS is available on many platforms, the majority of sites have deployed VME- or VXI-based input output controllers running the vxWorks real time operating system. Recently, a hybrid approach using vxWorks on both PC and traditional platforms is being implemented at LANL. To illustrate these developments the author compares his recent experience deploying PC-based EPICS input output controllers with experience deploying similar systems based on traditional EPICS platforms.

  9. Synchronized time stamp support

    SciTech Connect

    Kowalkowski, J.

    1994-02-16

    New software has been added to IOC core to maintain time stamps. The new software has the ability to maintain time stamps over all IOCs on a network. The purpose of this paper is to explain how EPICS will synchronize the time stamps. In addition, this paper will explain how to configure and use the new EPICS time stamp support software.

  10. The Unified Plant Growth Model (UPGM): software framework overview and model application

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Since the Environmental Policy Integrated Climate (EPIC) model was developed in 1989, the EPIC plant growth component has been incorporated into other erosion and crop management models (e.g., WEPS, WEPP, SWAT, ALMANAC, and APEX) and modified to meet model developer research objectives. This has re...

  11. Beowulf. Lessons from ORIAS Institute on History through Literature in the 6th Grade/7th Grade Core Classrooms, 1998-2000.

    ERIC Educational Resources Information Center

    Rinetti, Carolyn

    This lesson plan, featuring the epic, "Beowulf," employs the introduction-quotation exchange to monitor student comprehension while reading the epic. A second exercise, also dealing with reading comprehension, requires students to keep an historical evidence journal and fill out an historical evidence chart. The lesson plan features a hero's…

  12. What Do Young People Need When They Leave Care? Views of Care-Leavers and Aftercare Workers in North Dublin

    ERIC Educational Resources Information Center

    Daly, Fiona

    2012-01-01

    EPIC is an independent voluntary organisation in the Republic of Ireland that advocates for the rights of children in care and young people who have care experience. One aspect of EPIC's work is the Aftercare Advocacy and Support Service, which provides confidential advice and support to young people who are preparing to leave care, those in…

  13. REMOTE SENSING DEVELOPMENTS, RESEARCH AND ACTIVITIES AT THE ENVIRONMENTAL PHOTOGRAPHIC INTERPRETATION CENTER

    EPA Science Inventory

    The Environmental Photographic Interpretation Center (EPIC) has a 30+ year history of providing remote sensing support to EPA Regional and Program Offices. In addition to the its standard Technical Support mission, EPIC has developed a research program related to emerging technol...

  14. 1900 America: Historical Voices, Poetic Visions. Learning Page Lesson Plan.

    ERIC Educational Resources Information Center

    Beckmann, Chris; Gehler, David

    To better understand the turn-of-the-century United States, this interdisciplinary lesson (covering 6-8 weeks) integrates use of primary resources with historical and literary analysis. Students work in groups and express themselves creatively through a multi-media epic poem. The artistic models for the students' multi-media epic poem are Walt…

  15. 2011 Annual Report: Maine Course Pathways Project

    ERIC Educational Resources Information Center

    Educational Policy Improvement Center (NJ1), 2011

    2011-01-01

    The Educational Policy Improvement Center (EPIC), a 501(c)3 nonprofit organization, seeks to help policy makers and policy implementers alike do a better job of using educational policy as a tool to improve schooling and student learning. EPIC works with federal agencies, state education departments, non-governmental organizations, private…

  16. Program EPICP: Electron photon interaction code, photon test module. Version 94.2

    SciTech Connect

    Cullen, D.E.

    1994-09-01

    The computer code EPICP performs Monte Carlo photon transport calculations in a simple one zone cylindrical detector. Results include deposition within the detector, transmission, reflection and lateral leakage from the detector, as well as events and energy deposition as a function of the depth into the detector. EPICP is part of the EPIC (Electron Photon Interaction Code) system. EPICP is designed to perform both normal transport calculations and diagnostic calculations involving only photons, with the objective of developing optimum algorithms for later use in EPIC. The EPIC system includes other modules that are designed to develop optimum algorithms for later use in EPIC; this includes electron and positron transport (EPICE), neutron transport (EPICN), charged particle transport (EPICC), geometry (EPICG), source sampling (EPICS). This is a modular system that once optimized can be linked together to consider a wide variety of particles, geometries, sources, etc. By design EPICP only considers photon transport. In particular it does not consider electron transport so that later EPICP and EPICE can be used to quantitatively evaluate the importance of electron transport when starting from photon sources. In this report I will merely mention where we expect the results to significantly differ from those obtained considering only photon transport from that obtained using coupled electron-photon transport.

  17. One-way data transfer for PLC to VME status reporting at the Advanced Photon Source

    NASA Astrophysics Data System (ADS)

    Stein, S. J.

    1994-12-01

    The Personnel Safety System for the experimental beamlines at the Advanced Photon Source will use a large number of Allen Bradley Programmable Logic Controllers (PLC) to replace conventional relay logic. PLCs allow for the design of a very advanced safety system that can handle a large number of I/O points. Certain situations require monitoring of the safety system from various locations around the storage ring via the EPICS OPI (operator interface) consoles. This presentation covers the chosen method for transferring data from the Personnel Safety System into an EPICS database. Specifications on PLC ladder design, EPICS database design and hardware selection are also discussed.

  18. NASA Camera Catches Moon 'Photobombing' Earth

    NASA Video Gallery

    On July 5, 2016, the moon passed between NOAA's DSCOVR satellite and Earth. NASA's EPIC camera aboard DSCOVR snapped these images over a period of about four hours. In this set, the far side of the...

  19. A development environment for the SSC control system

    NASA Astrophysics Data System (ADS)

    Murray, Doug; Martinsen, Garth; Wang, Judy

    1994-12-01

    The SSC is developing a design environment for control system development within the context of EPICS. The environment is aimed at developers of applications using the EPICS Input/Output Controller (IOC). The unique aspect of this effort is our emphasis on providing a simple and intuitive development environment compared with tools currently available. Our most important goal in this effort has been to hide the complexity of EPICS IOC development from the developers. This paper describes two tools which are under development; The Function Block Editor (FBE) and the State Machine Editor (SME). The FBE provides a visual editing environment for graphically describing control processes as a set of related functional blocks. The configuration of functional blocks is then translated into IOC records and executed. SME allows the user to visually construct a sequence using a notation we are modeling after Grafcet [1]. State machines are translated into EPICS State Notation Language programs and executed. Future extensions will be described.

  20. Restrained and External-Emotional Eating Patterns in Young Overweight Children–Results of the Ulm Birth Cohort Study

    PubMed Central

    Brandt, Stephanie; Moss, Anja; Weck, Melanie; Florath, Ines; Wabitsch, Martin; Hebebrand, Johannes; Schimmelmann, Benno G.; Christiansen, Hanna

    2014-01-01

    Childhood obesity is one of the greatest public health challenges in Western countries. Abnormal eating behavior is thought to be a developmental trajectory to obesity. The Eating Pattern Inventory for Children (EPI-C) has not been used for children as young as eight years, and possible associations with body weight have not yet been established. Five hundred and twenty-one children of the Ulm Birth Cohort Study (UBCS; age eight) filled out the EPI-C and BMI was assessed. Adequacy of the scales was tested with confirmatory factor analysis and a MANOVA and cluster analysis established associations between eating patterns and BMI. The factor structure of the EPI-C was confirmed (GFI = .968) and abnormal eating behavior was associated with overweight (χ2(8) = 79.29, p<.001). The EPI-C is a valid assessment tool in this young age group. Overweight children consciously restrain their eating. PMID:25141134

  1. CONTEMPORARY ENVIRONMENTAL APPLICATIONS OF PHOTOGRAPHIC INTERPRETATION

    EPA Science Inventory

    Aerial Photographic Interpretation is a timed-tested technique for extracting landscape- level information from aerial photographs and other types of remotely sensed images. The U.S. Environmental Protection Agency's Environmental Photographic Interpretation Center (EPIC) has a 2...

  2. Control system renewal for efficient operation in RIKEN 18 GHz electron cyclotron resonance ion source

    NASA Astrophysics Data System (ADS)

    Uchiyama, A.; Ozeki, K.; Higurashi, Y.; Kidera, M.; Komiyama, M.; Nakagawa, T.

    2016-02-01

    A RIKEN 18 GHz electron cyclotron resonance ion source (18 GHz ECRIS) is used as an external ion source at the Radioactive Ion Beam Factory (RIBF) accelerator complex to produce an intense beam of medium-mass heavy ions (e.g., Ca and Ar). In most components that comprise the RIBF, the control systems (CSs) are integrated by the Experimental Physics and Industrial Control System (EPICS). On the other hand, a non-EPICS-based system has hardwired controllers, and it is used in the 18 GHz ECRIS CS as an independent system. In terms of efficient and effective operation, the 18 GHz ECRIS CS as well as the RIBF CS should be renewed using EPICS. Therefore, we constructed an 18 GHz ECRIS CS by using programmable logic controllers with embedded EPICS technology. In the renewed system, an operational log system was developed as a new feature, for supporting of the 18 GHz ECRIS operation.

  3. 33 CFR 165.118 - Safety Zones; recurring annual events held in Coast Guard Sector Boston Captain of the Port Zone.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... permit application each year in accordance with 33 CFR 100.15. (a) The Coast Guard may patrol each event...). 7.6Beverly Farms 4th of July Celebration Fireworks • Event Type: Fireworks Display.• Sponsor: Farms....5′ N, 070°40.7′ W. 8.4Urban Epic Triathlon • Event Type: Swim.• Sponsor: Tri-Maine/Urban Epic...

  4. [Comparison of the individual deprivation index of the French Health Examination Centres and the administrative definition of deprivation].

    PubMed

    Sass, C; Guéguen, R; Moulin, J J; Abric, L; Dauphinot, V; Dupré, C; Giordanella, J P; Girard, F; Guenot, C; Labbe, E; La Rosa, E; Magnier, P; Martin, E; Royer, B; Rubirola, M; Gerbaud, L

    2006-12-01

    In French Health Examination Centres, populations in deprived situation were usually defined by administrative criteria The aim of the study was to investigate whether EPICES, a new individual index of deprivation, was more strongly related to health status than an administrative classification. The EPICES score was calculated on the basis of 11 weighted questions related to material and social deprivation. Participants were 197, 389 men and women, aged over 18, encountered in 2002 in French Health Examination Centres. Relationships between health status, health-related behaviours, access to health care, EPICES and the administrative classification of deprivation were analyzed by logistic regression. The associations between EPICES and the study variables were stronger than those observed for the administrative definition. The comparison also showed socially disadvantaged people with poor health identified by the EPICES score who were not by the administrative classification. These results showed that the EPICES score can be a useful tool to improve the identification of deprived people having health problems associated to deprivation.

  5. Extended magnetohydrodynamics with embedded particle-in-cell simulation of Ganymede's magnetosphere

    NASA Astrophysics Data System (ADS)

    Tóth, Gábor; Jia, Xianzhe; Markidis, Stefano; Peng, Ivy Bo; Chen, Yuxi; Daldorff, Lars K. S.; Tenishev, Valeriy M.; Borovikov, Dmitry; Haiducek, John D.; Gombosi, Tamas I.; Glocer, Alex; Dorelli, John C.

    2016-02-01

    We have recently developed a new modeling capability to embed the implicit particle-in-cell (PIC) model iPIC3D into the Block-Adaptive-Tree-Solarwind-Roe-Upwind-Scheme magnetohydrodynamic (MHD) model. The MHD with embedded PIC domains (MHD-EPIC) algorithm is a two-way coupled kinetic-fluid model. As one of the very first applications of the MHD-EPIC algorithm, we simulate the interaction between Jupiter's magnetospheric plasma and Ganymede's magnetosphere. We compare the MHD-EPIC simulations with pure Hall MHD simulations and compare both model results with Galileo observations to assess the importance of kinetic effects in controlling the configuration and dynamics of Ganymede's magnetosphere. We find that the Hall MHD and MHD-EPIC solutions are qualitatively similar, but there are significant quantitative differences. In particular, the density and pressure inside the magnetosphere show different distributions. For our baseline grid resolution the PIC solution is more dynamic than the Hall MHD simulation and it compares significantly better with the Galileo magnetic measurements than the Hall MHD solution. The power spectra of the observed and simulated magnetic field fluctuations agree extremely well for the MHD-EPIC model. The MHD-EPIC simulation also produced a few flux transfer events (FTEs) that have magnetic signatures very similar to an observed event. The simulation shows that the FTEs often exhibit complex 3-D structures with their orientations changing substantially between the equatorial plane and the Galileo trajectory, which explains the magnetic signatures observed during the magnetopause crossings. The computational cost of the MHD-EPIC simulation was only about 4 times more than that of the Hall MHD simulation.

  6. Association between consumption of dairy products and incident type 2 diabetes--insights from the European Prospective Investigation into Cancer study.

    PubMed

    Forouhi, Nita G

    2015-08-01

    The public health burden of type 2 diabetes has risen unabated over the past decades, fueled by obesity and lifestyle influences, including diet quality. Epidemiological evidence is accumulating for an inverse association between dairy product intake and type 2 diabetes risk; this is somewhat counterintuitive to the saturated fat and cardiometabolic disease paradigm. The present report reviews the contribution that the findings of the European Prospective Investigation into Cancer (EPIC) study have made to this debate, noting that types of dairy products, particularly fermented dairy products including yogurt, may be more relevant than overall dairy intake for the prevention of type 2 diabetes. The EPIC study has contributed evidence through complementary approaches of a large prospective study across 8 European countries with heterogeneous dietary intakes assessed using food-frequency questionnaires (EPIC-InterAct study) and through a more detailed examination of diet assessed using a 7-day food diary (EPIC-Norfolk study). The implications of these findings are placed in the wider context, including the use of individual fatty acid blood biomarkers in the EPIC-InterAct study and an appraisal of current research gaps and suggestions for future research directions.

  7. Evaluation of Forecasted Southeast Pacific Stratocumulus in the NCAR, GFDL and ECMWF Models

    SciTech Connect

    Hannay, C; Williamson, D L; Hack, J J; Kiehl, J T; Olson, J G; Klein, S A; Bretherton, C S; K?hler, M

    2008-01-24

    We examine forecasts of Southeast Pacific stratocumulus at 20S and 85W during the East Pacific Investigation of Climate (EPIC) cruise of October 2001 with the ECMWF model, the Atmospheric Model (AM) from GFDL, the Community Atmosphere Model (CAM) from NCAR, and the CAM with a revised atmospheric boundary layer formulation from the University of Washington (CAM-UW). The forecasts are initialized from ECMWF analyses and each model is run for 3 days to determine the differences with the EPIC field data. Observations during the EPIC cruise show a stable and well-mixed boundary layer under a sharp inversion. The inversion height and the cloud layer have a strong and regular diurnal cycle. A key problem common to the four models is that the forecasted planetary boundary layer (PBL) height is too low when compared to EPIC observations. All the models produce a strong diurnal cycle in the Liquid Water Path (LWP) but there are large differences in the amplitude and the phase compared to the EPIC observations. This, in turn, affects the radiative fluxes at the surface. There is a large spread in the surface energy budget terms amongst the models and large discrepancies with observational estimates. Single Column Model (SCM) experiments with the CAM show that the vertical pressure velocity has a large impact on the PBL height and LWP. Both the amplitude of the vertical pressure velocity field and its vertical structure play a significant role in the collapse or the maintenance of the PBL.

  8. [Inspired by Apollo and Asclepio's sons in Homer and Virgil].

    PubMed

    Merlino, R L

    1989-01-01

    Important passages of the Homeric and Virgilian epic are regarding the art of divination and the medical science, and underline contextually the figures of the fortune teller and that of the physician. Two roles are associated to one matrix: heroic-aristocratic or royal-sacerdotal. In Homer's epic it is possible to single out surgical and phytotherapeutic knowledge together with remedies for diseases aroused by a solar god, like Apollo is, gods' physician. Pitiful divinities comfort those who have been struck by demoniac and mysterious forms. On the contrary, in Virgil's epic a symbiosis is carried out between the physician's figure and the priest's one, with the very vague outlines of the two arts and however, overloaded by factors which are typically Virgilian. Unusual form of incubation of the Greek rituals has been transplanted in the Latin matrix; and moreover there is a constant recall of words used in their most antique meaning.

  9. The cryogenic control system of BEPCII

    NASA Astrophysics Data System (ADS)

    Li, Gang; Wang, Ke-Xiang; Zhao, Ji-Jiu; Yue, Ke-Juan; Dai, Ming-Hui; Huang, Yi-Ling; Jiang, Bo

    2008-04-01

    A superconducting cryogenic system has been designed and deployed in the Beijing Electron- Positron Collider Upgrade Project (BEPCII). The system consists of a Siemens PLC (S7-PLC, Programmable Logic Controller) for the compressor control, an Allen Bradley (AB) PLC for the cryogenic equipments, and the Experimental Physics and Industrial Control System (EPICS) that integrates the PLCs. The system fully automates the superconducting cryogenic control with process control, PID (Proportional-Integral-Differential) control loops, real-time data access and data storage, alarm handler and human machine interface. It is capable of automatic recovery as well. This paper describes the BEPCII cryogenic control system, data communication between S7-PLC and EPICS Input/Output Controllers (IOCs), and the integration of the flow control, the low level interlock, the AB-PLC, and EPICS.

  10. Simultaneous X-Ray and Optical Timing Observations of GX 339-4

    NASA Technical Reports Server (NTRS)

    Kaaret, Philip; Mushotzky, Richard F. (Technical Monitor)

    2003-01-01

    The goal of this proposal is to perform the first comprehensive study of the correlated x-ray and optical variability of the Galactic accreting black hole candidate GX 339-4 using the x-ray and optical instruments on XMM-Newton. With these observations, we hope to make significant progress in understanding the coupled inflow - outflow system around a persistently accreting stellar mass black hole. We are currently analyzing the data. The data analysis is rather complex as it involves all of the instruments on XMM-Newton, the EPIC-PN, the EPIC-MOS, the RGS, and the OM, and our analysis requires study of correlated fast variability in the EPIC-PN and OM. We expect to have results ready to submit for publication within 3 to 4 months.

  11. Modelling methane fluxes from managed and restored peatlands

    NASA Astrophysics Data System (ADS)

    Cresto Aleina, F.; Rasche, L.; Hermans, R.; Subke, J. A.; Schneider, U. A.; Brovkin, V.

    2015-12-01

    European peatlands have been extensively managed over past centuries. Typical management activities consisted of drainage and afforestation, which lead to considerable damage to the peat and potentially significant carbon loss. Recent efforts to restore previously managed peatlands have been carried out throughout Europe. These restoration efforts have direct implications for water table depth and greenhouse gas emissions, thus impacting on the ecosystem services provided by peatland areas. In order to quantify the impact of peatland restoration on water table depth and greenhouse gas budget, We coupled the Environmental Policy Integrated Climate (EPIC) model to a process-based model for methane emissions (Walter and Heimann, 2000). The new model (EPIC-M) can potentially be applied at the European and even at the global scale, but it is yet to be tested and evaluated. We present results of this new tool from different peatlands in the Flow Country, Scotland. Large parts of the peatlands of the region have been drained and afforested during the 1980s, but since the late 1990s, programs to restore peatlands in the Flow Country have been enforced. This region offers therefore a range of peatlands, from near pristine, to afforested and drained, with different resoration ages in between, where we can apply the EPIC-M model and validate it against experimental data from all land stages of restoration. Goals of this study are to evaluate the EPIC-M model and its performances against in situ measurements of methane emissions and water table changes in drained peatlands and in restored ones. Secondly, our purpose is to study the environmental impact of peatland restoration, including methane emissions, due to the rewetting of drained surfaces. To do so, we forced the EPIC-M model with local meteorological and soil data, and simulated soil temperatures, water table dynamics, and greenhouse gas emissions. This is the first step towards a European-wide application of the EPIC

  12. Modeling water table dynamics in managed and restored peatlands

    NASA Astrophysics Data System (ADS)

    Cresto Aleina, Fabio; Rasche, Livia; Hermans, Renée; Subke, Jens-Arne; Schneider, Uwe; Brovkin, Victor

    2016-04-01

    European peatlands have been extensively managed over past centuries. Typical management activities consisted of drainage and afforestation, which lead to considerable damage to the peat and potentially significant carbon loss. Recent efforts to restore previously managed peatlands have been carried out throughout Europe. These restoration efforts have direct implications for water table depth and greenhouse gas emissions, thus impacting on the ecosystem services provided by peatland areas. In order to quantify the impact of peatland restoration on water table depth and greenhouse gas budget, We coupled the Environmental Policy Integrated Climate (EPIC) model to a process-based model for methane emissions (Walter and Heimann, 2000). The new model (EPIC-M) can potentially be applied at the European and even at the global scale, but it is yet to be tested and evaluated. We present results of this new tool from different peatlands in the Flow Country, Scotland. Large parts of the peatlands of the region have been drained and afforested during the 1980s, but since the late 1990s, programs to restore peatlands in the Flow Country have been enforced. This region offers therefore a range of peatlands, from near pristine, to afforested and drained, with different resoration ages in between, where we can apply the EPIC-M model and validate it against experimental data from all land stages of restoration Goals of this study are to evaluate the EPIC-M model and its performances against in situ measurements of methane emissions and water table changes in drained peatlands and in restored ones. Secondly, our purpose is to study the environmental impact of peatland restoration, including methane emissions, due to the rewetting of drained surfaces. To do so, we forced the EPIC-M model with local meteorological and soil data, and simulated soil temperatures, water table dynamics, and greenhouse gas emissions. This is the first step towards a European-wide application of the EPIC

  13. Channel Access in Erlang

    SciTech Connect

    Nicklaus, Dennis J.

    2013-10-13

    We have developed an Erlang language implementation of the Channel Access protocol. Included are low-level functions for encoding and decoding Channel Access protocol network packets as well as higher level functions for monitoring or setting EPICS process variables. This provides access to EPICS process variables for the Fermilab Acnet control system via our Erlang-based front-end architecture without having to interface to C/C++ programs and libraries. Erlang is a functional programming language originally developed for real-time telecommunications applications. Its network programming features and list management functions make it particularly well-suited for the task of managing multiple Channel Access circuits and PV monitors.

  14. The Experimental Physics and Industrial Control System architecture: Past, present, and future

    SciTech Connect

    Dalesio, L.R.; Hill, J.O.; Kraimer, M.; Lewis, S.; Murray, D.; Hunt, S.; Claussen, M.; Watson, W.; Dalesio, J.

    1993-11-01

    The Experimental Physics and Industrial Control System (EPICS), has been used at a number of sites for performing data acquisition, supervisory control, closed-loop control, sequential control, and operational optimization. The EPICS architecture was originally developed by a group with diverse backgrounds in physics and industrial control. The current architecture represents one instance of the ``standard model.`` It provides distributed processing and communication from any LAN device to the front end controllers. This paper will present the genealogy, current architecture, performance envelope, current installations, and planned extensions for requirements not met by the current architecture.

  15. Impact of hospital care on incidence of bloodstream infection: the evaluation of processes and indicators in infection control study.

    PubMed Central

    Kritchevsky, S. B.; Braun, B. I.; Wong, E. S.; Solomon, S. L.; Steele, L.; Richards, C.; Simmons, B. P.

    2001-01-01

    The Evaluation of Processes and Indicators in Infection Control (EPIC) study assesses the relationship between hospital care and rates of central venous catheter-associated primary bacteremia in 54 intensive-care units (ICUs) in the United States and 14 other countries. Using ICU rather than the patient as the primary unit of statistical analysis permits evaluation of factors that vary at the ICU level. The design of EPIC can serve as a template for studies investigating the relationship between process and event rates across health-care institutions. PMID:11294704

  16. Search for X-Ray Emission in the Nearest Known Brown Dwarf

    NASA Technical Reports Server (NTRS)

    Martin, Eduardo

    2002-01-01

    The XMM observations were obtained on 2001 January 07-08 for 51767 s. The Optical Monitor (OM) was used with the V filter for four exposures of 5000 s each in imaging mode. We used the data given by the OM to confirm the presence of the source in the field of view. The European Photon Imaging Camera (EPIC) MOS1 (Metal Oxide Semiconductor) and MOS2 were used 48724 s each in prime full window mode with 2.5 s time resolution. The EPIC PN was used 46618 s in prime full window mode with 73.4 ms time resolution.

  17. Simultaneous X-Ray and Optical Timing Observations of GX 339-4

    NASA Technical Reports Server (NTRS)

    Kaaret, Philip; Mushotzky, Richard F. (Technical Monitor)

    2004-01-01

    The goal of this proposal is to perform the first comprehensive study of the correlated X-ray and optical variability of the Galactic accreting black hole candidate GX 339-4 using the X-ray and optical instruments on XMM-Newton. With these observations, we hope to make significant progress in understanding the coupled inflow - outflow system around a persistently accreting stellar mass black hole. The data is now all reduced. This includes the data analysis for all of the instruments on XMM-Newton, the EPIC - PN, the EPIC - MOS, the RGS, and the OM. We are currently preparing the results for publication.

  18. APS runControl library

    SciTech Connect

    Saunders, C.; Borland, M.

    1995-10-25

    This document serves as a User`s Manual and Reference for the runControl library. This library is designed to be used by closed- loop EPICS control applications which are generally run in the background on the controls workstations. It permits an application to `register` itself with an EPICS record, thereby preventing additional instances of the same application from being run. In addition, the executing application may in turn be suspended or aborted via an MEDM control screen or other standard channel access client.

  19. 76 FR 44452 - Privacy Act of 1974: Implementation of Exemptions; Department of Homeland Security National...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-07-26

    ... Register, 75 FR 69603, on November 15, 2010, proposing to exempt portions of the system of records from one... concurrently in the Federal Register, 75 FR 69693, November 15, 2010, and comments were invited on both the... fundamental and necessary part of the Privacy Act protections and staves off mission creep. EPIC cited...

  20. 78 FR 4859 - Notice of Proposed Information for Public Comment for: Energy and Performance Information Center

    Federal Register 2010, 2011, 2012, 2013, 2014

    2013-01-23

    ... conjunction with Low Income Housing Tax Credits; other planning collections and performance reports presently... Performance Goals (APGs), specifically APG 4, Measure 13 which sets numeric targets for completing green... completed with PIH funding. The EPIC data system will also improve PHA planning by making the five year...

  1. Rapid development of a measurement and control system for the Advanced Free-Electron Laser

    SciTech Connect

    Wilson, W.L. Jr.; May, M.W.; Kozubal, A.J.

    1991-01-01

    The Experimental Physics and Industrial Control System (EPICS) is being used to develop a measurement and control system for the Advanced Free-Electron laser (AFEL) at the Los Alamos National Laboratory. EPICS is an integrated system of applications development tools and a distributed run time environment that supports an input-output database, a graphical operator interface, sequential control through state'' definition, data archiving, data analysis, and fault management. It is very advantageous in terms of both time and system integrity to be able to perform much of the control system development before the actual hardware for the AFEL is in place. Using the EPICS applications tools, we are developing prototype measurements and controls that can be directly transferred to the AFEL during installation and commissioning. This is possible due primarily to three aspects of EPICS. First we can easily model physical systems with the state notation language. Second, we can simulate input and output channels with soft'' database channels, which are created using the database configuration tool. Third, we can easily build and modify operator interface screens with the display editor. 8 refs., 3 figs.

  2. Environmental Aesthetics, Social Engagement and Aesthetic Experiences in Central Asia

    ERIC Educational Resources Information Center

    Breed, Amanda

    2015-01-01

    In this essay, I explore the Youth Theatre for Peace (YTP) project in relation to environmental aesthetics and engaged participatory practices towards tolerance building in Central Asia. My main argument is that cultural histories of storytelling, "manas" (an oral and now literary Kyrgyz epic) and trickster tales incorporate ideas and…

  3. Empowering Elementary Students' Ecological Thinking through Discussing the Animé Nausicaa and Constructing Super Bugs

    ERIC Educational Resources Information Center

    Stokrocki, Mary L.; Delahunt, Michael

    2008-01-01

    Ecological teaching models and evidence of success in public schools may be lacking. We created a constructivist ecological model using the animé Nausicaa with fourth graders in a Scottsdale, Arizona school. The animé involves the epic adventure, good and evil battle to affect the future of the human race. We documented results using…

  4. Approaching "Gilgamesh": King-Boasts and Hero-Talk.

    ERIC Educational Resources Information Center

    Ferry, David

    2003-01-01

    Contends that the ancient Babylonian epic poem "Gilgamesh" makes room for elements that call into question the very nature of heroic. Notes that the opening passage of the poem informs readers that it is going to foster elements contrary to expectations. Provides examples of such surprises. (PM)

  5. The "Gilgamesh" Cycle.

    ERIC Educational Resources Information Center

    Zalewski, James W.

    1993-01-01

    Offers a narrative based on a real event, in the form of a "docustory," describing that moment when teaching worked--when, in an instructional setting, communication was "perfect,""best," or "excellent." Offers a teacher's stream of consciousness observations as he teaches the Gilgamesh epic in a high school mythology class. (SR)

  6. Magnetometry at Uruk (Iraq): The city of King Gilgamesh

    NASA Astrophysics Data System (ADS)

    Fassbinder, J.; Becker, H.; van Ess, M.

    2003-04-01

    Uruk (Tell Warka) is one of the most famous sites for the early cultural development at Mesopotamia. The Sumerian city state was also important for the origin of writing and Uruk was the scene of action of mans oldest epic, the famous Epic of Gilgamesh (2600 B.C). During the time of the Sassanides, 400 A.D. the city was given up completely. Today the ruin is dominated by shallow hills and wadis, covered by pottery, mudbricks and slags. The area is totally free of modern buildings and far away from the modern village of Warka. Therefore it is an ideal place for uncompensated cesium magnetometry. The most sensational find was the discovery of a canal system inside the city. Furthermore the magnetogram shows the remains of buildings of the Babylonian type as well as garden structures, a middle Babylonian graveyard and the so called "New Years Temple" of the God Anu or Godess Ischtar. The city wall, which we prospected in a length of more than one kilometer, includes a water gate and is nearly 40 meters broad. From magnetometry it is evident that it was build by burned mudbricks as it was described by the Epic. In the west of the "New Years Temple" in the middle of the former Euphrates river we detected the remains of a building which may be interpreted as a burial. But if this building is the grave of the famous King Gilgamesh as it was described by the Epic of Gilgamesh it must remain speculative.

  7. Seton Hall University's Solution for Teacher Retention and Recruitment.

    ERIC Educational Resources Information Center

    Hanbury, Father Kevin M.

    2001-01-01

    Presents the strategies used by Seton Hall University (New Jersey) for teacher retention and recruitment, including: (1) creating a master's degree program in Catholic School leadership; (2) starting EPICS (Educational Partners in Catholic Schools), which develops motivated and committed educators; and (3) designing a program for a master's degree…

  8. Creating College Readiness: Profiles of 38 Schools That Know How

    ERIC Educational Resources Information Center

    Conley, D. T.

    2009-01-01

    In June 2007, the Educational Policy Improvement Center (EPIC) was awarded a grant from the Bill and Melinda Gates Foundation to develop the College Ready School Diagnostic, a web-based diagnostic instrument. The purpose of this tool is to provide individual school profiles and customized recommendations, enabling each institution to make…

  9. COLLABORATIVE, MULTI-TIME PERIOD LIDAR COLLECTION AND ANALYSIS FOR RESIDENTIAL DEVELOPMENT IMPACT ASSESSMENT AND MONITORING

    EPA Science Inventory

    The U.S. EPA Environmental Photographic Interpretation Center (EPIC) in

    Reston, Virginia is currently conducting collaborative landscape/stream ecology research

    in the Clarksburg Special Protection Area (CSPA) in Montgomery County, Maryland.

    The CSPA is an ar...

  10. OCLC: Changing the Tasks of Librarianship.

    ERIC Educational Resources Information Center

    Smith, K. Wayne

    1993-01-01

    Reviews the history of OCLC and describes current and future objectives. Highlights include membership; network affiliations; cataloging services; interlibrary loan; EPIC, a new reference system; a new telecommunications network; PRISM, a new online system for cataloging and resource sharing; pricing strategies; international operations; and…

  11. Drinking habits in ancient India

    PubMed Central

    Somasundaram, Ottilingam; Raghavan, D. Vijaya; Murthy, A. G. Tejus

    2016-01-01

    Consumption of one or other form of intoxicating substances has been present throughout the history of the world. This article traces such use in the Indian subcontinent, both in North and South India. References to the use of intoxicants are to be found in the Vedas, the Great Epics, and the ancient Tamil literature. PMID:26985113

  12. Comparative Study between the "Lista de Encabezamientos de Materia" by Gloria Escamilla and the "Library of Congress Subject Heading" List.

    ERIC Educational Resources Information Center

    Alvarez, Fernando

    This study shows to what extent Gloria Escamilla's "Lista de Encabezamientos de Materia," the only published Mexican subject heading list, is equivalent to the Library of Congress subject headings (LCSH). A LCSH heading sample is obtained from OCLC's Online Union Catalog. Using the EPIC search from OCLC, 1947 bibliographic records were obtained,…

  13. Drug Dependency: A Legacy from the Past.

    ERIC Educational Resources Information Center

    Labianca, Dominick A.; Reeves, William J.

    1984-01-01

    In the nineteenth century people consumed opium in the form of laudanum to relieve their anxieties. Today drug abuse has become a problem of epic proportions. For a segment of our society, chemicals represent relief from physical and mental pain. (CS)

  14. Teaching War Literature, Teaching Peace

    ERIC Educational Resources Information Center

    Powers, Janet M.

    2007-01-01

    This article explores literature taught in three different courses and the peace education approaches used for each, including epics in literature courses, Vietnam War literature, and literature of anger and hope. The author recommends the teaching of war literature as an essential part of a peace education curriculum. Devastating events such as…

  15. Ideology and Poetics in Public Issue Construction: Thatcherism, Civil Liberties, and "Terrorism" in Northern Ireland.

    ERIC Educational Resources Information Center

    Parry-Giles, Trevor

    1995-01-01

    Examines the rhetoric of Margaret Thatcher, indicating how Thatcherism intensified existing ideological tensions within the British context; how Thatcherism constructed the public issue of "terrorism" in Northern Ireland as an "epic tragedy"; and how such a construction materially shifted and ensnared commitments to "freedom" and civil liberties.…

  16. Oregon Pre-Engineering Learning Outcomes Study: Final Report

    ERIC Educational Resources Information Center

    Conley, David T.; Langan, Holly; Veach, Darya; Farkas, Virginia

    2007-01-01

    The Oregon Pre-engineering Learning Outcomes Project was conducted by the Educational Policy Improvement Center (EPIC) with grant funding from the Engineering and Technology Industry Council (ETIC). The study sought to improve student preparation and success in pre-engineering programs through the development of the Oregon Pre-engineering Learning…

  17. The 1849 gold rush was in California, not the Klondike

    NASA Astrophysics Data System (ADS)

    Stern, David P.

    In the book review of The Barren Lands: An Epic Search for Diamonds in the North American Arctic (Eos, May 13, 2003), one sentence caught my eye: ``the man who triggered a mining stampede not seen since the Klondike Gold Rush of 1849.''

  18. Resource Units and an Individualized Free-Reading Program for English, Grades 8-12.

    ERIC Educational Resources Information Center

    Virginia State Dept. of Education, Richmond. Div. of Secondary Education.

    To improve the basic curriculum in English instruction for low-achieving pupils, this bulletin brings together resource units; a description of an individualized, free-reading program, and bibliographies of materials. The bulk of the publication consists of 26 resource units (e.g., "Animals in Literature,""Faces of War,""Beowulf, an Epic Hero")…

  19. A Graceful Leap Backwards: From "Shane" to "Beowulf."

    ERIC Educational Resources Information Center

    Shuman, R. Baird

    1977-01-01

    Suggests that students who have found "Shane" to be an exciting literary experience can be motivated to read other heroic literature such as "Beowulf" if the teacher presents it with an eye toward motivation. "The Odyssey" might follow os another epic poem. (TJ)

  20. Beowulf 3D: a case study

    NASA Astrophysics Data System (ADS)

    Engle, Rob

    2008-02-01

    This paper discusses the creative and technical challenges encountered during the production of "Beowulf 3D," director Robert Zemeckis' adaptation of the Old English epic poem and the first film to be simultaneously released in IMAX 3D and digital 3D formats.

  1. Our Heroic Adventure: Creating a Personal Mythology

    ERIC Educational Resources Information Center

    Rubin, Lawrence C.

    2009-01-01

    Utilizing Joseph Campbell's concept of the hero's adventure, this article provides a technique through which clients can story their lives and challenges as an unfolding personal myth or epic adventure. The use of personal narrative and storytelling has found efficacy in the counseling field and, as such, forms a useful foundation for clinical…

  2. Mediating Knowledge through Peer-to-Peer Interaction in a Multicultural Online Learning Environment: A Case Study of International Students in the US

    ERIC Educational Resources Information Center

    Sadykova, Gulnara

    2014-01-01

    The continuous growth of online learning and its movement towards cross-border and cross-culture education has recently taken a new turn with the epic hype that currently surrounds the development of massive open online courses (MOOCs) (Beattie-Moss, 2013). This development brings to focus the experiences of international students who take online…

  3. The Fable and the Fabulous: The Use of Traditional Forms in Children's Literature.

    ERIC Educational Resources Information Center

    Hedges, Ned Samuel

    Although literature written especially for children has been a development of the past two centuries, most lasting works of children's literature derive their narrative patterns and structures of meaning from ancient and traditional literary forms and conventions, such as fable, myth, epic, and romance. This study provides an interpretive analysis…

  4. The Ramayana.

    ERIC Educational Resources Information Center

    American Forum for Global Education, New York, NY.

    For the past 2000 years the Ramayana has been among the most important literary and oral texts of South Asia. This epic poem provides insights into many aspects of Indian culture and continues to influence the politics, religion, and art of modern India. This booklet contains material designed to provide an entry into the study of this tradition.…

  5. India - Mahabharata. Fulbright-Hays Summer Seminar Abroad 1994 (India).

    ERIC Educational Resources Information Center

    DeVito, Carole; DeVito, Pasquale

    This lecture is accompanied by slides of India. The lecture is used an introduction to the first of the three videotapes of Peter Brook's "Mahabharata," providing students with preliminary background on Hinduism and on the Hindu epic. The objective is also to have students think about the basic values of ancient and modern Hindus. (EH)

  6. Hinduism: A Unit for Junior High and Middle School Social Studies Classes.

    ERIC Educational Resources Information Center

    Galloway, Louis J.

    As an introduction and explanation of the historical development, major concepts, beliefs, practices, and traditions of Hinduism, this teaching unit provides a course outline for class discussion and activities for reading the classic epic, "The Ramayana." The unit requires 10 class sessions and utilizes slides, historical readings, class…

  7. Multivalent Narratives and Indian Rhetoric: Insights from the "Bhagavad Gita."

    ERIC Educational Resources Information Center

    Stroud, Scott R.

    The "Bhagavad Gita" is a didactic dialogue inserted approximately in the middle of an immensely long Indian epic entitled the "Mahabharata." This paper examines the use of narrative in this ancient Hindu religious work, the "Bhagavad Gita"--specific attention is given to how the story in this didactic text uses dialogic events between the two main…

  8. California Diploma Project Technical Report II: Alignment Study--Alignment Study of the Health Sciences and Medical Technology Draft Standards and California's Exit Level Common Core State Standards

    ERIC Educational Resources Information Center

    McGaughy, Charis; de Gonzalez, Alicia

    2012-01-01

    The California Department of Education is in the process of revising the Career and Technical Education (CTE) Model Curriculum Standards. The Educational Policy Improvement Center (EPIC) conducted an investigation of the draft version of the Health Sciences and Medical Technology Standards (Health Science). The purpose of the study is to…

  9. Eventos de Octubre (October Events).

    ERIC Educational Resources Information Center

    Pla, Myrna; Toro, Leonor

    Written in Spanish, this booklet contains information on three events occurring in the month of October: the discovery of America (October 12), the organization of the United Nations (October 24), and Halloween (October 31). Christopher Columbus' journey to America is discussed through a short story; an epic poem ("Velas Epicas"); and five poems…

  10. All the World's a Writing Stage: Living Contexts for Literature.

    ERIC Educational Resources Information Center

    Cecala, Frank P.

    1989-01-01

    Describes a writing exercise in which the fictional world of a literary piece is transformed into a real world containing people, events, and places. Suggests that students choose their own writing topics and act out the results. Notes that sources of worlds include epic poems, Shakespeare, and Greek mythology. (RS)

  11. THE VALUE OF THE CLASSICS AS AN ELECTIVE IN COLLEGE COURSES FOR THE ENGLISH MAJOR WHO INTENDS TO TEACH IN HIGH SCHOOL. INTERIM REPORT.

    ERIC Educational Resources Information Center

    WOLFF, JOSEPH

    TO ESTABLISH WHETHER OR NOT COURSES IN THE CLASSICS AID SIGNIFICANTLY IN THE PREPARATION OF HIGH SCHOOL ENGLISH TEACHERS, THE GRADUATE RECORD EXAMINATION ADVANCED TEST ON LITERATURE (GRE) SCORES OF 11 SENIORS WHO HAD TAKEN AT LEAST ONE OF TWO CLASSICS COURSES, AT LOYOLA UNIVERSITY, ON THE THEATRE AND THE EPIC WERE COMPARED WITH THE SCORES OF…

  12. Anime Goes Mainstream: There's Something for Everyone, so Get in on the Act

    ERIC Educational Resources Information Center

    Halsall, Jane

    2010-01-01

    "Princess Mononoke," "Akira," and "Cowboy Bebop" may not be household names. But in the world of anime, or Japanese animation, they are among the top 10 films ever made. With its complex plots and moral messages, anime is as intelligent as some of the best feature films. From the epic fantasy "Ninja Scroll" and the cyberpunk "Ghost in the Shell"…

  13. Matchmaker, Matchmaker, Find Me a Roommate

    ERIC Educational Resources Information Center

    Lipka, Sara

    2008-01-01

    Blind dates can go awry, but a roommate mismatch can spoil a semester. Nasty habits. Bitter grudges. Epic stand-offs over square inches. Luckily, most pairings don't get that ugly, whether campuses make them randomly or by running survey responses through a computer. These days many students even control their own fates: More and more colleges let…

  14. 76 FR 7627 - Petition for Waiver of Compliance

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-02-10

    ... electronic controls. Electronic airbrake systems began to be introduced in the early 1990s. Due to the clean... electronic air brake equipment. They have also submitted information from WRE supporting combining EPIC.... Waiver Docket Number FRA-2000-7367 (formerly H-95-3), applies to electronic brake systems manufactured...

  15. History and the Relationship between Scientific and Pedagogical Knowledge: Anatomy Lectures Then and Now

    ERIC Educational Resources Information Center

    Roth, Wolff-Michael; Friesen, Norm

    2014-01-01

    In recent years, school science has been the target of increasing critique for two reasons. On the one hand, it is said to enforce "epic" images of science that celebrate the heroes and heroic deeds that established the scientific canon and its methods and thereby falsifies the history and nature of science. On the other hand, the…

  16. ADSORPTION OF ISOXAFLUTOLE DEGRADATES TO ALUMINUM AND IRON HYDOUS OXIDES

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Isoxaflutole (IXF) is sold under the trade names Balance(TM), Balance Pro(TM), and Epic(TM). IXF rapidly hydrolyzes to the degradate diketonitrile (DKN), the active herbicide principle, after field application. Subsequently, DKN may be biologically degraded to a benzoic acid (BA) derivative and othe...

  17. The Black Scholar Interviews: Alex Haley

    ERIC Educational Resources Information Center

    Allen, Robert L.

    1976-01-01

    A native of Henning, Tennessee, Alex Haley taught himself to write during a twenty year career in the U.S. Coast Guard. After retiring from that service, in 1959, he became a magazine writer and interviewer, and has spent 12 years researching and writing "Roots" (Doubleday, 1976), the epic drama of his family from the abduction of his ancestor…

  18. K'etetaalkkaanee: The One Who Paddled among the People and Animals. The Story of an Ancient Traveler Told by

    ERIC Educational Resources Information Center

    Attla, Catherine; Jones, Eliza; Thompson, Chad

    The classic Koyukon tale "K'etetaalkkaanee" recounts the epic journey of a traveler, strong in spirit power, who traverses the North. As he follows the destined path, he effects the transformation of animals, establishes customs, defines features of the physical world, and illustrates practical wisdom. The tale is recounted in Koyukon, an…

  19. THE APPLICATION OF PHOTOGRAPHIC INTERPRETATION AND RELATED TECHNOLOGIES IN MODERN ENVIRONMENTAL PROTECTION

    EPA Science Inventory

    Imagery Interpretation is a timed-tested technique for extracting landscape-level information from aerial photographs and other types of remotely sensed data. The U.S. Environmental Protection Agency's Environmental Photographic Interpretation Center (EPIC) has a 25+ year history...

  20. "It's Now We've Crossed Pease River": Themes of Voyage and Return in Texas Folk Songs

    ERIC Educational Resources Information Center

    Baake, Ken

    2010-01-01

    Stories of development from childhood to adulthood or of journeying through a life-changing experience to gain new knowledge are replete in oral and written tradition, as exemplified by the Greek epic of Odysseus and countless other tales. Often the hero journeys naively to an alien land and then, with great difficulty, returns home wiser but…

  1. PLANTS OF RAMAYANA*

    PubMed Central

    Balapure, K. M.; Maheshwari, J. K.; Tandon, R. K.

    1987-01-01

    The article presents a list of plants mentioned in Ramayana one of the two great epics of this country which has been compiled and the probable equivalent botanical names have been fixed. This study will be useful to the botanists, palaeo – botanists, ethonobotanists, foresters, naturalists and environmentalists as well. PMID:22557592

  2. The Thanksgiving Address: An Expression of Haudenosaunee Worldview.

    ERIC Educational Resources Information Center

    Cornelius, Carol

    1992-01-01

    Provides overview of Thanksgiving Address of Haudenosaunee, which defines and expresses Native American worldview. Summarizes three epic narratives: Creation Story, which explains forces of good and evil on earth; Great Law of Peace, which provides system of government; and Code of Handsome Lake, which outlines way to continue old ways and adapt…

  3. Enter the Villain: Against Oral Reading in Secondary Schools

    ERIC Educational Resources Information Center

    Frager, Alan

    2010-01-01

    Both content area teachers and reading teachers often see oral reading in epic proportions, as a hero in the struggle for the best way to motivate students to read. This article briefly reviews the reasons that are commonly given for supporting the use of oral reading in the classroom. The author then provides a rationale for opposing traditional…

  4. Impact design methods for ceramic components in gas turbine engines

    NASA Technical Reports Server (NTRS)

    Song, J.; Cuccio, J.; Kington, H.

    1991-01-01

    Methods currently under development to design ceramic turbine components with improved impact resistance are presented. Two different modes of impact damage are identified and characterized, i.e., structural damage and local damage. The entire computation is incorporated into the EPIC computer code. Model capability is demonstrated by simulating instrumented plate impact and particle impact tests.

  5. Systematic Uncertainties in the Spectroscopic Measurements of Neutron-star Masses and Radii from Thermonuclear X-Ray Bursts. III. Absolute Flux Calibration

    NASA Astrophysics Data System (ADS)

    Güver, Tolga; Özel, Feryal; Marshall, Herman; Psaltis, Dimitrios; Guainazzi, Matteo; Díaz-Trigo, Maria

    2016-09-01

    Many techniques for measuring neutron star radii rely on absolute flux measurements in the X-rays. As a result, one of the fundamental uncertainties in these spectroscopic measurements arises from the absolute flux calibrations of the detectors being used. Using the stable X-ray burster, GS 1826-238, and its simultaneous observations by Chandra HETG/ACIS-S and RXTE/PCA as well as by XMM-Newton EPIC-pn and RXTE/PCA, we quantify the degree of uncertainty in the flux calibration by assessing the differences between the measured fluxes during bursts. We find that the RXTE/PCA and the Chandra gratings measurements agree with each other within their formal uncertainties, increasing our confidence in these flux measurements. In contrast, XMM-Newton EPIC-pn measures 14.0 ± 0.3% less flux than the RXTE/PCA. This is consistent with the previously reported discrepancy with the flux measurements of EPIC-pn, compared with EPIC MOS1, MOS2, and ACIS-S detectors. We also show that any intrinsic time-dependent systematic uncertainty that may exist in the calibration of the satellites has already been implicity taken into account in the neutron star radius measurements.

  6. Creating Positive Attitudes toward Reading in Public Schools and Homeschools.

    ERIC Educational Resources Information Center

    Gilmore, Deanna Peterschick

    Learning environments have an impact on acquiring skills in reading as well as developing positive attitudes toward reading. Another variable that affects attitudes and aptitude toward reading is the "climate" or "environment" in which children learn their skills. This paper concentrates on the phenomenon that is reaching epic proportions in the…

  7. Oral Storytelling and Teaching Mathematics: Pedagogical and Multicultural Perspectives

    ERIC Educational Resources Information Center

    Schiro, Michael Stephen

    2004-01-01

    This book contains two case studies of teachers telling epic oral stories to teach math to elementary and middle school students. The book also includes theoretical discussions of essential elements of oral storytelling, multicultural education, how oral storytelling can help children who have difficulty learning mathematics, and mathematical…

  8. Teaching Cultural History from Primary Events

    ERIC Educational Resources Information Center

    Carson, Robert N.

    2004-01-01

    This article explores the relationship between specific cultural events such as Galileo's work with the pendulum and a curriculum design that seeks to establish in skeletal form a comprehensive epic narrative about the co-evolution of cultural systems and human consciousness. The article explores some of the challenges and some of the strategies…

  9. Analytical chemistry: Virulence caught green-handed

    NASA Astrophysics Data System (ADS)

    Sanchez, Laura M.; Dorrestein, Pieter C.

    2013-03-01

    Many of us eat mushrooms, but few of us have probably ever thought about -- let alone witnessed -- the epic battle of kingdoms that can occur between this delicacy and its bacterial pathogens. Now, imaging mass spectrometry has enabled the identification of a bacterium's potent antifungal weapon of choice.

  10. The integration of two control systems

    SciTech Connect

    Bickley, M.; White, K.

    1995-12-31

    During the past year the Continuous Electron Beam Accelerator Facility (CEBAF) has installed a new machine control system, based on the Experimental Physics and Industrial Control System (EPICS). The migration from CEBAF`s old control system, Thaumaturgic Automated Control Logic (TACL), had to be done concurrently with commissioning of the CEBAF accelerator. The smooth transition to EPICS was made possible by the similarity of the control systems` topological design and network communication protocol. Both systems have operator display computer nodes which are decoupled from the data acquisition and control nodes. The communication between display and control nodes of both control systems is based on making named requests for data, with data being passed on change of value. Due to TACL`s use of a central communications process, it was possible to integrate both control systems` network communications in that process. This in turn meant that CEBAF did not require changes to any other software in order to support network communication between TACL and EPICS. CEBAF implemented the machine`s control under EPICS in an evolutionary, controlled manner. 4 refs., 3 figs.

  11. The integration of two control systems

    SciTech Connect

    Bickley, M; White, K

    1995-01-01

    During the past year the Continuous Electron Beam Accelerator Facility (CEBAF) has installed a new machine control system, based on the Experimental Physics and Industrial Control System (EPICS). The migration from CEBAF`s old control system, Thaumaturgic Automated Control Logic (TACL), had to be done concurrently with commissioning of the CEBAF accelerator. The smooth transition to EPICS was made possible by the similarity of the control systems` topological design and network communication protocol. Both systems have operator display computer nodes which are decoupled from the data acquisition and control nodes. The communication between display and control nodes of both control systems is based on making named requests for data, with data being passed on change of value. Due to TACL`s use of a central communications process, it was possible to integrate both control systems` network communications in that process. This in turn meant that CEBAF did not require changes to any other software in order to support network communication between TACL and EPICS. CEBAF implemented the machine`s control under EPICS in an evolutionary, controlled manner. 4 refs., 3 figs.

  12. John Dewey, Gothic and Modern

    ERIC Educational Resources Information Center

    Kaminsky, James S.

    2010-01-01

    It is argued here that understanding John Dewey's thought as that of a prodigal liberal or a fellow traveller does not capture the complexity of his work. It is also important to recognise the portion of his work that is "historie morale." In the very best sense it is epic, encapsulating the hopes and dreams of a history of the American people in…

  13. Additive influence of genetic predisposition and conventional risk factors in the incidence of coronary heart disease: a population-based study in Greece

    Technology Transfer Automated Retrieval System (TEKTRAN)

    An additive genetic risk score (GRS) for coronary heart disease (CHD) has previously been associated with incident CHD in the population-based Greek European Prospective Investigation into Cancer and nutrition (EPIC) cohort. In this study, we explore GRS-‘environment’ joint actions on CHD for severa...

  14. The Big Shift: How the University of Houston Libraries Moved Everything

    ERIC Educational Resources Information Center

    Sharpe, Paul A.

    2012-01-01

    More than a project, The Big Shift is an epic library tale for the ages. What starts as a simple collection shift grows into a major space-planning project, a lesson in catalog maintenance, and thanks to Hurricane Ike, a disaster recovery effort. The Big Shift tells the story of how the University of Houston Libraries handled the numerous…

  15. Syllabus for Use in Russian Literature.

    ERIC Educational Resources Information Center

    Cernonok, Jevgenij

    This syllabus outlines a two semester course to accompany the basic textbook: THE EPIC OF RUSSIAN LITERATURE by Marc Slonim. An introduction to the guide gives a brief summary of the history of Russian literature and objectives of the course are stated, defining concepts and understandings to be developed. In addition, teaching techniques are…

  16. AGU Presidential Forum: Science and Society

    NASA Astrophysics Data System (ADS)

    Winchester, S.

    2011-12-01

    British author and journalist Simon Winchester has a knack for finding fascinating people and events to write about. Fueled by curiosity, passion, and a journalist's instinct for what makes "good copy," Winchester has explored the obscure, arcane, and idiosyncratic, resulting in bestselling books that have been called "extraordinary," "mesmerizing" and "both epic and intimate."

  17. Building Collections: Folklore

    ERIC Educational Resources Information Center

    Krapp, JoAnn Vergona

    2005-01-01

    Folklore, the oldest form of storytelling, reflects the culture of a country, hence its nonfiction classification. Through these tales, one senses the values, the humor, and the lifestyles of its peoples. A powerful genre, folklore is the foundation on which high fantasy is created, epic films are produced, and a single story is passed from one…

  18. From precipitation to groundwater baseflow in a native prairie ecosystem: a regional study of the Konza LTER in the Flint Hills of Kansas, USA

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Methods are developed to study hydrologic interactions across the surficial/groundwater interface in a native prairie ecosystem. Surficial ecohydrologic processes are simulated with the USDA’s EPIC model using daily climate data from the Kansas Weather Data Library, vegetation and soil data from the...

  19. What Educators Need to Know about Bullying

    ERIC Educational Resources Information Center

    Graham, Sandra

    2011-01-01

    Peer victimization--or what's known as harassment or bullying--is not a new problem in American schools, though it appears to have taken on more epic proportions in recent years. The research about peer victimization has increased dramatically in the past 10 years, but there are still many myths about bullying. This article discusses six myths…

  20. Crosswalk Analysis of Deeper Learning Skills to Common Core State Standards

    ERIC Educational Resources Information Center

    Conley, David T.

    2011-01-01

    The Educational Policy Improvement Center (EPIC) conducted a crosswalk between the Deeper Learning Skills (DLS) and the Common Core State Standards (CCSS). The purpose of the crosswalk was to understand the ways in which strategies for deeper learning relate to the CCSS. This comparison was not solely or simply an alignment study, although some…

  1. Hunting Reynard: How "Reynard the Fox" Tricked His Way into English and Dutch Children's Literature

    ERIC Educational Resources Information Center

    Parlevliet, Sanne

    2008-01-01

    This article examines adaptations in their capacity of preserving literary heritage. It describes how the Middle Dutch beast epic "Reynard the Fox" lost its position in literature for adults and became part of a literary heritage that was no longer read but only studied for its historical value. Versions for children kept the story alive. A…

  2. 77 FR 42338 - Investigations Regarding Eligibility To Apply for Worker Adjustment Assistance

    Federal Register 2010, 2011, 2012, 2013, 2014

    2012-07-18

    ... (Company). 81760 EPIC Technologies, LLC Norwalk, OH 06/27/12 06/26/12 (Company). 81761 Exopack LLC (Workers... Electric (Union).. Peru, IN 06/29/12 06/28/12 81765 Newell Rubbermaid (Company). Wooster, OH 06/29/12 06/14/12 ] BILLING CODE 4510-FN-P...

  3. A Simulated Learning Environment of History Games for Enhancing Players' Cultural Awareness

    ERIC Educational Resources Information Center

    Shih, Ju-Ling; Jheng, Shun-Cian; Tseng, Jia-Jiun

    2015-01-01

    This research attempted to create the historical context of Southern Taiwan in the late nineteenth century based on the martial art novel "Xiao-Mao" (Pussy) by designing a role-play digital game "Taiwan Epic Game" about the war time; in which, Taiwanese history, geography, and culture are presented in an innovative way with…

  4. Graphic Novels in the Classroom

    ERIC Educational Resources Information Center

    Martin, Adam

    2009-01-01

    Today many authors and artists adapt works of classic literature into a medium more "user friendly" to the increasingly visual student population. Stefan Petrucha and Kody Chamberlain's version of "Beowulf" is one example. The graphic novel captures the entire epic in arresting images and contrasts the darkness of the setting and characters with…

  5. Using Ken Burns's "The Civil War" in the Classroom

    ERIC Educational Resources Information Center

    Levin, Kevin M.

    2010-01-01

    When it aired in 1989, Ken Burns's epic documentary about America's Civil War garnered the largest audience in PBS history. Viewers who had little interest or knowledge of the Civil War were attracted to the powerful images and sounds as well as the narration by David McCullough and commentary by Shelby Foote--the combination of which served to…

  6. California Diploma Project Technical Report I: Crosswalk Study--Crosswalk of the Intersegmental Committee for the Academic Senate Statements of Competencies to the Common Core State Standards

    ERIC Educational Resources Information Center

    McGaughy, Charis; de Gonzalez, Alicia

    2012-01-01

    The Educational Policy Improvement Center (EPIC) conducted an investigation of the Intersegmental Committee for the Academic Senates (ICAS) Statements of Competencies for Mathematics and Academic Literacy. The purpose of this work is to understand how the ICAS competencies relate to college and career readiness, as represented by the augmented…

  7. An educational video game for nutrition of young people: Theory and design

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Playing Escape from Diab (DIAB) and Nanoswarm (NANO), epic video game adventures, increased fruit and vegetable consumption among a multi-ethnic sample of 10-12 year old children during pilot testing. Key elements of both games were educational mini-games embedded in the overall game that promoted k...

  8. HIGH-LEVEL CONTROL SYSTEM IN C#

    SciTech Connect

    Nishimura, Hiroshi; Timossi, Chris; Portmann, Greg; Urashka, Michael.; Ikami, Craig; Beaudrow, M.

    2008-10-14

    We have started upgrading the control room programs for the injector at the Advanced Light Source (ALS). We chose to program in C* exclusively on the .NET Framework to create EPICS client programs on Windows Vista PCs. This paper reports the status of this upgrade project.

  9. Teaching Students to Show, Not Tell

    ERIC Educational Resources Information Center

    Spitzer, Mark

    2012-01-01

    In his epic poem "A Season in Hell," the surly French poet Arthur Rimbaud proposes that the Devil likes writing that lacks "descriptive" qualities. Rimbaud then makes a stand in favor of descriptive writing by offering "these hideous pages from [his] notes of the damned." The author would not go so far as to say that nondescriptive writing is evil…

  10. Things to Do in Duskwood When You're Dead: English Lessons from "World of Warcraft"

    ERIC Educational Resources Information Center

    Moon, Brian

    2008-01-01

    "World of Warcraft" is an online computer game with over nine million players, many of them technically-minded young males. A proportion of these young males engage in spontaneous creative writing about their game adventures. They enjoy highly formulaic genres, such as the epic poem, with its complex technical requirements. This has implications…

  11. Code modernization and modularization of APEX and SWAT watershed simulation models

    Technology Transfer Automated Retrieval System (TEKTRAN)

    SWAT (Soil and Water Assessment Tool) and APEX (Agricultural Policy / Environmental eXtender) are respectively large and small watershed simulation models derived from EPIC Environmental Policy Integrated Climate), a field-scale agroecology simulation model. All three models are coded in FORTRAN an...

  12. 77 FR 60704 - Medical Devices; Availability of Safety and Effectiveness Summaries for Premarket Approval...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2012-10-04

    ... (with the adjunctive Zenith Alignment Stent). P110029, FDA-2012-M-0372 Abbot Laboratories... ARCHITECT... Stent on RX System. P110035, FDA-2012-M-0373 Boston Scientific Epic\\TM\\ Vascular Self- April 13, 2012. Corp. Expanding Stent System. P090015, FDA-2012-M-0390 Leica Biosystems..... BOND\\TM\\ ORACLE\\TM\\...

  13. Measuring School Effectiveness in Memphis--Year 2. Final Report

    ERIC Educational Resources Information Center

    Potamites, Liz; Chaplin, Duncan; Isenberg, Eric; Booker, Kevin

    2009-01-01

    New Leaders for New Schools, a nonprofit organization committed to training school principals, heads the Effective Practices Incentive Community (EPIC), an initiative that offers financial awards to effective educators. New Leaders and its partner organizations have received from the U.S. Department of Education tens of millions of dollars in…

  14. The evolution of Jefferson Lab's control system

    SciTech Connect

    K. S. White; M. Bickley; W. Watson

    1999-10-01

    Thomas Jefferson National Accelerator Facility's (Jefferson Lab) accelerator controls were initially implemented as a proprietary in-house system. During machine commissioning, problems were encountered leading to a decision to migrate to the Experimental Physics and Industrial Controls System (EPICS). Since then, the accelerator and all other laboratory controls have been successfully converted. In addition to implementing Jefferson Lab's controls using EPICS, new data visualization tools have been developed and existing programs have been enhanced with new capabilities. In order to provide a more generic interface for high level applications development, a device abstraction layer, called Common DEVice (CDEV), was implemented. These additions have been made available to other laboratories and are in use at many sites, including some that do not use EPICS. Control System development is not limited to computer scientists; operators, engineers and physicists frequently add capabilities using EPICS, CDEV, Tel/tk, and other tools. These contributions have tailored the control system for many different types of customers. For the future, the authors envision more intelligent processing and more capable tools for data storage, retrieval and visualization.

  15. Are We Having Fun Yet? Humor in the English Class.

    ERIC Educational Resources Information Center

    McMahon, Maureen

    1999-01-01

    Argues that humor is an invaluable teaching tool in English classes. Describes how the author and her students: found humor an important means of discovering profound truths in Shakespeare's dramas; enjoyed the epic "Paradise Lost"; worked with satire in Chaucer; and used humor in students' own creative activities. (SR)

  16. Modelling precursor decay in AD-99.5 Alumina

    SciTech Connect

    Simha, C. Hari Manoj; Bless, S. J.; Bedford, A.

    1998-07-10

    In this paper we present a simple model to explain the absence of precursor decay in the Coor's AD-99 5 Alumina ceramic, as shown by Grady in his plate impact experiments. The model is incorporated into the Research EPIC 95 finite element code. The simulations compare well with Grady's results.

  17. Modelling precursor decay in AD-99.5 Alumina

    NASA Astrophysics Data System (ADS)

    Simha, C. Hari Manoj; Bless, S. J.; Bedford, A.

    1998-07-01

    In this paper we present a simple model to explain the absence of precursor decay in the Coor's AD-99 5 Alumina ceramic, as shown by Grady in his plate impact experiments. The model is incorporated into the Research EPIC 95 finite element code. The simulations compare well with Grady's results.

  18. The Health Improvement Network (THIN)

    Cancer.gov

    The Health Improvement Network is a collaboration between Cegedim Strategic Data EPIC, an expert in the provision of UK primary care patient data that is used for medical research, and In Practice Systems (InPS), who continue to develop and supply the widely-used Vision general practice computer system.

  19. Validation Study III: Alignment of the Texas College and Career Readiness Standards with Courses in Two Career Pathways

    ERIC Educational Resources Information Center

    Conley, David T.; McGaughy, Charis; Brown, Derek; van der Valk, Adrienne; Young, Brittney

    2009-01-01

    This is the fourth report in a series of five reports resulting from the Texas College and Career Readiness Initiative (TCCRI) established by the Texas Higher Education Coordinating Board (THECB) under contract with the Educational Policy Improvement Center (EPIC). The purpose of the TCCRI is the Facilitation of the Development and Implementation…

  20. Validation Study III: Alignment of the Texas College and Career Readiness Standards with Courses in Two Career Pathways. [Executive Summary

    ERIC Educational Resources Information Center

    Conley, David T.; McGaughy, Charis; Brown, Derek; van der Valk, Adrienne; Young, Brittney

    2009-01-01

    This is the fourth report in a series of five reports resulting from the Texas College and Career Readiness Initiative (TCCRI) established by the Texas Higher Education Coordinating Board (THECB) under contract with the Educational Policy Improvement Center (EPIC). The purpose of the TCCRI is the Facilitation of the Development and Implementation…

  1. "It Gets Narrower": Creative Strategies for Re-Broadening Queer Peer Education

    ERIC Educational Resources Information Center

    Harris, Anne; Farrington, David

    2014-01-01

    Using collaborative performance ethnography in community- and school-based settings, sex education has the potential to challenge at-risk narratives for lesbian, gay, bisexual, transgender, intersex and queer (LGBTIQ) youth. This paper problematises the youth-led drama project "Epic Queer" to test the "queer" potential of…

  2. Literacy through Literature: A Cross-Cultural and Broad-Spectrum Approach to Reading and Writing Facility through Literature.

    ERIC Educational Resources Information Center

    Grant, Barbara M.

    This paper presents the concept of a cross-cultural and broad-spectrum approach to reading and writing that enables children to become involved with literature, encourages them to respond and produce, and motivates them to read and write. It includes sections on epic literature, books that explain natural phenomena and modern/future world…

  3. Nightly sildenafil use after radical prostatectomy has adverse effects on urinary convalescence: Results from a randomized trial of nightly vs on-demand dosing regimens

    PubMed Central

    Hyndman, Matthew Eric; Bivalacqua, Trinity J.; Feng, Zhaoyong; Mettee, Lynda Z.; Su, Li-Ming; Trock, Bruce J.; Pavlovich, Christian P.

    2015-01-01

    Introduction: This is a report on urinary function results from a randomized trial of nightly versus on-demand sildenafil after nerve-sparing radical prostatectomy (RP), a secondary objective. We analyzed the effects of these sildenafil administration schemes on urinary health-related quality of life after RP. Methods: In total, 100 potent men were equally randomized to nightly and on-demand sildenafil 50 mg after minimally-invasive RP for 1 year. Health-related quality of life questionnaires were administered at various postoperative intervals. Urinary function was assessed using appropriate expanded prostate cancer index composite (EPIC) subscales. Analyses of covariance and linear mixed-effects modeling were used to compare the effects of treatment over time on urinary recovery, controlling for age, nerve-sparing score, and time from surgery. Results: The nightly (n = 50) and on-demand (n = 50) sildenafil groups were well-matched at baseline. Nightly sildenafil patients had worse EPIC urinary bother and urinary irritative/obstructive subscale scores at 3 and 6 months after RP, even after controlling for multiple variables. On mixed-model analyses, the differences between groups for these EPIC subscales (4.9 and 2.5, respectively) were greater than documented thresholds for clinical significance. Increasing nerve-sparing score was associated with improvements in EPIC urinary summary, bother, incontinence, and function scores; time from surgery was associated with improvements in all EPIC urinary health-related quality of life subscales. Conclusions: In this specific population and drug dose, we found that on-demand short-acting phosphodiesterase-5 inhibitor (PDE5i) dosing may be more effective after RP to maximize early urinary health-related quality of life. In preoperatively potent men, nightly sildenafil 50 mg impaired urinary health-related quality of life more than on-demand use in the early months after nerve-sparing RP, independent of effects on urinary

  4. Stereotactic Body Radiation Therapy for Prostate Cancer: What is the Appropriate Patient-Reported Outcome for Clinical Trial Design?

    PubMed Central

    Woo, Jennifer Ai-Lian; Chen, Leonard N.; Wang, Hongkun; Cyr, Robyn A.; Bhattasali, Onita; Kim, Joy S.; Moures, Rudy; Yung, Thomas M.; Lei, Siyuan; Collins, Brian Timothy; Suy, Simeng; Dritschilo, Anatoly; Lynch, John H.; Collins, Sean P.

    2015-01-01

    Purpose: Stereotactic body radiation therapy (SBRT) is increasingly utilized as primary treatment for clinically localized prostate cancer. Consensus regarding the appropriate patient-reported outcome (PRO) endpoints for clinical trials evaluating radiation modalities for early stage prostate cancer is lacking. To aid in clinical trial design, this study presents PROs over a 36-month period following SBRT for clinically localized prostate cancer. Methods: Between February 2008 and September 2010, 174 hormone-naïve patients with clinically localized prostate cancer were treated with 35–36.25 Gy SBRT (CyberKnife, Accuray) delivered in 5 fractions. Patients completed the validated Expanded Prostate Cancer Index Composite (EPIC)-26 questionnaire at baseline and all follow-ups. The proportion of patients developing a clinically significant decline in each EPIC domain score was determined. The minimally important difference (MID) was defined as a change of one-half the standard deviation from the baseline. Per Radiation Therapy Oncology Group (RTOG) 0938, we also examined the patients who experienced a decline in EPIC urinary domain summary score of >2 points (unacceptable toxicity defined as ≥60% of all patients reporting this degree of decline) and EPIC bowel domain summary score of >5 points (unacceptable toxicity defined as >55% of all patients reporting this degree of decline) from baseline to 1 year. Results: A total of 174 patients at a median age of 69 years received SBRT with a minimum follow-up of 36 months. The proportion of patients reporting a clinically significant decline (MID for urinary/bowel are 5.5/4.4) in EPIC urinary/bowel domain scores was 34%/30% at 6 months, 40%/32.2% at 12 months, and 32.8%/21.5% at 36 months. The patients reporting a decrease in the EPIC urinary domain summary score of >2 points was 43.2% (CI: 33.7%, 54.6%) at 6 months, 51.6% (CI: 43.4%, 59.7%) at 12 months, and 41.8% (CI: 33.3%, 50.6%) at 36 months. The

  5. The K2-ESPRINT Project. II. Spectroscopic Follow-up of Three Exoplanet Systems from Campaign 1 of K2

    NASA Astrophysics Data System (ADS)

    Van Eylen, Vincent; Nowak, Grzegorz; Albrecht, Simon; Palle, Enric; Ribas, Ignasi; Bruntt, Hans; Perger, Manuel; Gandolfi, Davide; Hirano, Teriyuki; Sanchis-Ojeda, Roberto; Kiilerich, Amanda; Prieto-Arranz, Jorge; Badenas, Mariona; Dai, Fei; Deeg, Hans J.; Guenther, Eike W.; Montañés-Rodríguez, Pilar; Narita, Norio; Béjar, Leslie A. Rogers ´ctor J. S., Vi; Shrotriya, Tushar S.; Winn, Joshua N.; Sebastian, Daniel

    2016-03-01

    We report on Doppler observations of three transiting planet candidates that were detected during Campaign 1 of the K2 mission. The Doppler observations were conducted with FIES, HARPS-N, and HARPS. We measure the mass of EPIC 201546283b, and provide constraints and upper limits for EPIC 201295312b and EPIC 201577035b. EPIC 201546283b is a warm Neptune orbiting its host star in 6.77 days and has a radius of {4.45}-0.33+0.33 {R}\\oplus and a mass of {29.1}-7.4+7.5 {M}\\oplus , which leads to a mean density of {1.80}-0.55+0.70 {{g}} {{cm}}-3. EPIC 201295312b is smaller than Neptune with an orbital period of 5.66 days, a radius of {2.75}-0.22+0.24 {R}\\oplus , and we constrain the mass to be below 12 {M}\\oplus at 95% confidence. We also find a long-term trend indicative of another body in the system. EPIC 201577035b, which was previously confirmed as the planet K2-10b, is smaller than Neptune, orbiting its host star in 19.3 days, with a radius of {3.84}-0.34+0.35 {R}\\oplus . We determine its mass to be {27}-16+17 {M}\\oplus , with a 95% confidence upper limit at 57 {M}\\oplus , and a mean density of {2.6}-1.6+2.1 {\\text{g cm}}-3. These measurements join the relatively small collection of planets smaller than Neptune with measurements or constraints of the mean density. Our code for performing K2 photometry and detecting planetary transits is now publicly available. Based on observations made with the NOT telescope under programme ID. 50-022/51-503 and 50-213(CAT), the TNG telescope under programme ID. AOT30.13, OPT15A_33, and CAT14B_121 and ESOs 3.6 m telescope at the La Silla Paranal Observatory under programme ID 095.C-0718(A).

  6. Health-Related Quality of Life After Single-Fraction High-Dose-Rate Brachytherapy and Hypofractionated External Beam Radiotherapy for Prostate Cancer

    SciTech Connect

    Morton, Gerard C.; Loblaw, D. Andrew; Chung, Hans; Tsang, Gail; Sankreacha, Raxa; Deabreu, Andrea; Zhang Liying; Mamedov, Alexandre; Cheung, Patrick; Batchelar, Deidre; Danjoux, Cyril; Szumacher, Ewa

    2011-08-01

    Purpose: To investigate the change in health-related quality of life for men after high-dose-rate brachytherapy and external beam radiotherapy for prostate cancer and the factors associated with this change. Methods and Materials: Eligible patients had clinically localized intermediate-risk prostate cancer. The patients received high-dose-rate brachytherapy as a single 15-Gy implant, followed by external beam radiotherapy to 37.5 Gy in 15 fractions. The patients were monitored prospectively for toxicity (Common Terminology Criteria for Adverse Events, version 3.0) and health-related quality of life (Expanded Prostate Cancer Index Composite [EPIC]). The proportion of patients developing a clinically significant difference in the EPIC domain score (minimally important difference of >0.5 standard deviation) was determined and correlated with the baseline clinical and dosimetric factors. The study accrued 125 patients, with a median follow-up of 24 months. Results: By 24 months, 23% had Grade 2 urinary toxicity and only 5% had Grade 2 bowel toxicity, with no Grade 3 toxicity. The proportion of patients reporting a significant decrease in EPIC urinary, bowel, sexual, and hormonal domain scores was 53%, 51%, 45%, and 40% at 12 months and 57%, 65%, 51%, and 30% at 24 months, respectively. The proportion with a >1 standard deviation decrease in the EPIC urinary, bowel, sexual, and hormonal domain scores was 38%, 36%, 24%, and 20% at 12 months and 46%, 48%, 19%, and 8% at 24 months, respectively. On multivariate analysis, the dose to 10% of the urethra was associated with a decreasing EPIC urinary domain score (p = .0089) and, less strongly (p = .0312) with a decreasing hormonal domain score. No association was found between the prostate volume, bladder dose, or high-dose volume and urinary health-related quality of life. A high baseline International Index of Erectile Function score was associated (p = .0019) with a decreasing sexual domain score. The optimal maximal dose

  7. Magnetospheric Simulations With the Three-Dimensional Magnetohydrodynamics With Embedded Particle-in-Cell Model

    NASA Astrophysics Data System (ADS)

    Toth, G.; Jia, X.; Chen, Y.; Markidis, S.; Peng, B.; Daldorff, L. K. S.; Tenishev, V.; Borovikov, D.; Haiducek, J. D.; Gombosi, T. I.; Glocer, A.; Dorelli, J.; Lapenta, G.

    2015-12-01

    We have recently developed a new modeling capability to embed the implicit Particle-in-Cell (PIC) model iPIC3D into the BATS-R-US magnetohydrodynamic model. The PIC domain can cover the regions where kinetic effects are most important, such as reconnection sites. The BATS-R-US code, on the other hand, can efficiently handle the rest of the computational domain where the MHD or Hall MHD description is sufficient with its block-adaptive grid. The current implementation of the MHD-EPIC model allows two-way coupled simulations in two and three dimensions with multiple embedded PIC regions. The MHD and PIC grids can have different grid resolutions. The MHD variables and the moments of the PIC distribution functions are interpolated and message passed in an efficient manner through the Space Weather Modeling Framework (SWMF). Both BATS-R-US and iPIC3D are massively parallel codes fully integrated into, run by and coupled through the SWMF. We have successfully applied the MHD-EPIC code to model Ganymede's magnetosphere. Using four PIC regions we have in effect performed a fully kinetic simulation of the moon's mini-magnetosphere with a grid resolution that is about 5 times finer than the ion inertial length. The Hall MHD model provides proper boundary conditions for the four PIC regions and connects them with each other and with the inner and outer outer boundary conditions of the much larger MHD domain. We compare our results with Galileo magnetic observations and find good overall agreement with both Hall MHD and MHD-EPIC simulations. The power spectrum for the small scale fluctuations, however, agrees with the data much better for the MHD-EPIC simulation than for Hall MHD. In the MHD-EPIC simulation, unlike in the pure Hall MHD results, we also find signatures of flux transfer events (FTEs) that agree very well with the observed FTE signatures both in terms of shape and amplitudes. We will also highlight our ongoing efforts to model the magnetospheres of Mercury and

  8. Multi-Device Knob Utility for LCLS

    SciTech Connect

    Zelazny, Michael; Chevtsov, Sergei; Chu, Chungming Paul; Fairley, Diane; Krejcik, Patrick; Rogind, Deborah; Smith, Howard; White, Greg; Yocky, Gerald; /SLAC

    2009-12-09

    At the SLAC National Accelerator Laboratory (SLAC) the Controls Department (CD) has developed a new Multi-Device Knob Utility (MKB) based on the Experimental Physics and Industrial Control System (EPICS) toolkit for controlling one or more Process Variables (PVs) in unison, or simultaneously, from a physical knob located in the control room, or from various software tools such as the EPICS Extensible Display Manager (EDM) or a Swing slider in Java. A group of devices are hooked up to a knob, and then the value written to the devices is a simple function of the value of the knob. This is used, most commonly, to create a bump in the electron beam for the Linac Coherent Light Source (LCLS). Control system variables typically controlled are magnetic fields, phases, and timing offsets. This paper describes the technologies used to implement this utility.

  9. VizieR Online Data Catalog: K2-30 b and K2-34 b K2 light curves (Lillo-Box+, 2016)

    NASA Astrophysics Data System (ADS)

    Lillo-Box, J.; Demangeon, O.; Santerne, A.; Barros, S. C. C.; Barrado, D.; Hebrard, G.; Osborn, H. P.; Armstrong, D. J.; Almenara, J.-M.; Boisse, I.; Bouchy, F.; Brown, D. J. A.; Courcol, B.; Deleuil, M.; Delgado Mena, E.; Diaz, R. F.; Kirk, J.; Lam, K. W. F.; McCormac, J.; Pollacco, D.; Rajpurohit, A.; Rey, J.; Santos, N. C.; Sousa, S. G.; Tsantaki, M.; Wilson, P. A.

    2016-10-01

    The star K2-30 (EPIC210957318, 03:29:22.07 +22:17:57.9) was observed by K2 during its campaign 4, between February 7th and April 23rd, 2015. K2-34 (EPIC212110888, 08:30:18.91 +22:14:09.3) belongs to field-of-view 5, photometrically monitored by K2 between April 27th and July 10th, 2015. The data was reduced using both the Warwick (Armstrong et al. 2015A&A...579A..19A, Cat. J/A+A/579/A19) and the LAM- K2 (Barros et al., 2015MNRAS.454.4267B) pipelines. The detrended data (see Tables 1 and 2) show 1.9% and 0.8% dimmings every 4.099 and 2.996 days for K2-30 and K2-34, respectively (see Figs. 1 and 2). (2 data files).

  10. Spitzer Observations of Exoplanets Discovered with the Kepler K2 Mission

    NASA Astrophysics Data System (ADS)

    Beichman, Charles; Livingston, John; Werner, Michael; Gorjian, Varoujan; Krick, Jessica; Deck, Katherine; Knutson, Heather; Wong, Ian; Petigura, Erik; Christiansen, Jessie; Ciardi, David; Greene, Thomas P.; Schlieder, Joshua E.; Line, Mike; Crossfield, Ian; Howard, Andrew; Sinukoff, Evan

    2016-05-01

    We have used the Spitzer Space Telescope to observe two transiting planetary systems orbiting low-mass stars discovered in the Kepler K2 mission. The system K2-3 (EPIC 201367065) hosts three planets, while K2-26 (EPIC 202083828) hosts a single planet. Observations of all four objects in these two systems confirm and refine the orbital and physical parameters of the planets. The refined orbital information and more precise planet radii possible with Spitzer will be critical for future observations of these and other K2 targets. For K2-3b we find marginally significant evidence for a transit timing variation between the K2 and Spitzer epochs.

  11. The Knowledge Program: an innovative, comprehensive electronic data capture system and warehouse.

    PubMed

    Katzan, Irene; Speck, Micheal; Dopler, Chris; Urchek, John; Bielawski, Kay; Dunphy, Cheryl; Jehi, Lara; Bae, Charles; Parchman, Alandra

    2011-01-01

    Data contained in the electronic health record (EHR) present a tremendous opportunity to improve quality-of-care and enhance research capabilities. However, the EHR is not structured to provide data for such purposes: most clinical information is entered as free text and content varies substantially between providers. Discrete information on patients' functional status is typically not collected. Data extraction tools are often unavailable. We have developed the Knowledge Program (KP), a comprehensive initiative to improve the collection of discrete clinical information into the EHR and the retrievability of data for use in research, quality, and patient care. A distinct feature of the KP is the systematic collection of patient-reported outcomes, which is captured discretely, allowing more refined analyses of care outcomes. The KP capitalizes on features of the Epic EHR and utilizes an external IT infrastructure distinct from Epic for enhanced functionality. Here, we describe the development and implementation of the KP.

  12. Evaluation and prediction of Henry's law constants and aqueous solubilities for solvents and hydrocarbon fuel components. Volume 1. Technical discussion. Final report, February 1985-September 1986

    SciTech Connect

    Howe, G.B.; Mullins, M.E.; Rogers, T.N.

    1987-09-01

    Laboratory measurements of Henry's law constants are reported for 51 chemicals, spanning a wide range of chemical structures and volatilities. A static headspace method (Equilibrium Partitioning in Closed Systems, referred to as EPICS) was used to measure Henry's Law Constant, with the standard-batch air-stripping method used as a check. An average precision of 5% was obtained for the EPICS runs, and the Henry's law constants agreed reasonably well(within 10%) with the batch air-stripping results and other reported experimental values. Measurements were conducted over a temperature range of 10-30 C, and the data were correlated with a temperature regression equation coupled with a temperature-dependent error term based on 95% confidence limits. The aqueous solubilities of the study compounds were also determined via the shake-flask method at temperatures of 10, 20, and 30/sup 0/C.pacts

  13. Transient Tolerant Automated Control System for the LEDA 75kV Injector

    SciTech Connect

    Thuot, M.E.; Dalesio, L.R.; Harrington, M.; Hodgkins, D.; Kerstiens, D.M.; Stettler, M.W.; Warren, D.S.; Zaugg, T.; Arvin, A.; Bolt, S.; Richards, M.

    1999-03-29

    The Low-Energy Demonstration Accelerator (LEDA) injector is designed to inject 75-keV, 110-mA, proton beams into the LEDA RFQ. The injector operation has been automated to provide long term, high availability operation using the Experimental Physics and Industrial Control System (EPICS). Automated recovery from spark-downs demands reliable spark detection and sequence execution by the injector controller. Reliable computer control in the high-energy transient environment required transient suppression and isolation of hundreds of analog and binary data lines connecting the EPICS computer controller to the injector and it's power supplies and diagnostics. A transient suppression design based on measured and modeled spark transient parameters provides robust injector operation. This paper describes the control system hardware and software design, implementation and operational performance.

  14. Electron Bunch Length Measurement for LCLS at SLAC

    SciTech Connect

    Zelazny, M.; Allison, S.; Chevtsov, Sergei; Emma, P.; Kotturi, K.d.; Loos, H.; Peng, S.; Rogind, D.; Straumann, T.; /SLAC

    2007-10-04

    At Stanford Linear Accelerator Center (SLAC) a Bunch Length Measurement system has been developed to measure the length of the electron bunch for its new Linac Coherent Light Source (LCLS). This destructive measurement uses a transverse-mounted RF deflector (TCAV) to vertically streak the electron beam and an image taken with an insertable screen and a camera. The device control software was implemented with the Experimental Physics and Industrial Control System (EPICS) toolkit. The analysis software was implemented in Matlab{trademark} using the EPICS/Channel Access Interface for Scilab{trademark} and Matlab{trademark} (labCA). This architecture allowed engineers and physicists to develop and integrate their control and analysis without duplication of effort.

  15. Channel Access Client Toolbox for Matlab

    SciTech Connect

    Terebilo, Andrei

    2002-08-07

    This paper reports on MATLAB Channel Access (MCA) Toolbox--MATLAB [1] interface to EPICS Channel Access (CA) client library. We are developing the toolbox for SPEAR3 accelerator controls, but it is of general use for accelerator and experimental physics applications programming. It is packaged as a MATLAB toolbox to allow easy development of complex CA client applications entirely in MATLAB. The benefits include: the ability to calculate and display parameters that use EPICS process variables as inputs, availability of MATLAB graphics tools for user interface design, and integration with the MATLAB-based accelerator modeling software--Accelerator Toolbox [2-4]. Another purpose of this paper is to propose a feasible path to a synergy between accelerator control systems and accelerator simulation codes, the idea known as on-line accelerator model.

  16. A Hard Look at Neutron Star Radii and Disks with XMM-Newton and NuSTAR

    NASA Astrophysics Data System (ADS)

    Miller, Jon

    2013-10-01

    We request 40 ks observations of Cygnus X-2, 4U 1636-53, GX 17+2 and 4U 1705-44, jointly with XMM-Newton and NuSTAR. The primary goals are to test the ubiquity of relativistic lines in "Z" and "atoll" sources, and to obtain constraints on stellar radii and/or inner disk radii in cases where relativistic lines are found. With NuSTAR as a guide, we will determine when pile-up has been removed from the EPIC-pn ``timing'' mode observations via the exclusion of central pixels. We can then fully leverage the superior resolution of the EPIC-pn in the Fe K band in order to check for ionized disk winds that could distort disk reflection. The low energy coverage of XMM-Newton will give the best possible contraints on the direct continuum and the neutral line-of-sight absorption.

  17. Proceedings of the PILAC optics workshop

    SciTech Connect

    Not Available

    1991-11-01

    This report contains viewgraphs on the following topics: PILAC Overview; PILAC Injection Line; PILAC General-Purpose Line Design; Program RAYTRACE; Design Performance of MRS; Program MOTER; Recent Upgrades of MOTER; Use of MOTER at Michigan State; Spectrometer Design at Michigan State; Use of MOTER at CEBAF Related Topics; TOSCA Calculations at CEBAF; TOSCA Calculations for PILAC; Measurements of EPICS Quadrupoles; Quadrupole Measurements and Analysis at Bates Laboratory; Analysis of 3D Quadrupole Data; Quadrupole 3D Fringe Fields (Theoretical Lecture); Analysis of 3D Field Data; Analysis of Dipole Fringe Fields; Quadrupoles with Perfect N=2 Symmetry; CEBAF Superconducting Cos (20) Quadrupole; Upgrades to TRANSPORT and TURTLE; Optics using Differential Algebra; and A Possible Test of Quad Optics Using EPICS.

  18. Implementation of improved interactive image analysis at the Advanced Photon Source (APC) linac.

    SciTech Connect

    Arnold, N.

    1998-09-11

    An image-analysis system, based on commercially available data visualization software (IDL [1]), allows convenient interaction with image data while still providing calculated beam parameters at a rate of up to 2 Hz. Image data are transferred from the IOC to the workstation via EPICS [2] channel access. A custom EPICS record was created in order to overcome the channel access limit of 16k bytes per array. The user can conveniently calibrate optical transition radiation (OTR) and fluorescent screens, capture background images, acquire and average a series of images, and specify several other filtering and viewing options. The images can be saved in either IDL format or APS-standard format (SDDS [3]), allowing for rapid postprocessing of image data by numerous other software tools.

  19. Cranial trauma in ancient Greece: from Homer to classical authors.

    PubMed

    Konsolaki, Eleni; Astyrakaki, Elisabeth; Stefanakis, George; Agouridakis, Panos; Askitopoulou, Helen

    2010-12-01

    This article presents literary evidence on traumatic cranio-cerebral injuries in ancient Greece from about 900 B.C. to 100 B.C. The main sources of information are epic and classic Greek texts of that period. Homer provides the first literary source of head trauma, which he portrayed in his epic poems The Iliad and The Odyssey. He describes 41 injuries of the head, face and cervical spine, of which all but two were fatal. Subsequently, other classical authors like Plato, Plutarch and others illustrate cases of cranial trauma that occurred mainly in the battlefields, during athletic games or in unusual accidents. They describe some interesting cases of head trauma in prominent men, such as the poet Aeschylos, the kings Pyrrhos and Kyros and Alexander the Great. Most of these descriptions show that the ancient Greeks possessed very good knowledge of the anatomy of the head and neck region and also of the pathophysiological consequences of trauma in the region.

  20. AUTOMATED CONTROL AND REAL-TIME DATA PROCESSING OF WIRE SCANNER/HALO SCRAPER MEASUREMENTS

    SciTech Connect

    L.A. DAY; J.D. GILPATRICK; ET AL

    2001-06-01

    The Low-Energy Demonstration Accelerator (LEDA), assembled and operating at Los Alamos National Laboratory, provides the platform for obtaining measurements of high-power proton beam-halo formation. Control system software and hardware have been integrated and customized to enable the production of real-time beam-halo profiles. The Experimental Physics and Industrial Control System (EPICS) hosted on a VXI platform, Interactive Data Language (IDL) programs hosted on UNIX platforms, and LabVIEW (LV) Virtual Instruments hosted on a PC platform have been integrated and customized to provide real-time, synchronous motor control, data acquisition, and data analysis of data acquired through specialized DSP instrumentation. These modules communicate through EPICS Channel Access (CA) communication protocol extensions to control and manage execution flow ensuring synchronous data acquisition and real-time processing of measurement data. This paper describes the software integration and management scheme implemented to produce these real-time beam profiles.

  1. The Nature of the Flaring EUVE Companion to HD 43162

    NASA Technical Reports Server (NTRS)

    Kulkarni, Shrinivas R.

    2005-01-01

    The purpose of our program was to observe and characterize the companion to HD 43162, EUVE J0614-2354, which (serendipitously) experienced an enormous flare event during our EUVE observation of HD 43162, one of the nearby solar analogs that we observed during our survey of this population. Our observation was carried out and the data have been received and reduced. We are able to identify EUVE J0614-2354 in both the X-ray (EPIC MOS + PN) and the UV (OM) data, which provides a sub-arcsecond position for this source. Our findings are consistent with the analysis of Christian et al. (2003a,b), who identify EUVE J0614-2354 with a coronally-active M-dwarf star at distance d = 15 plus or minus 5pc. The X-ray spectrum from the EPIC data are also consistent with this identification.

  2. XMM-Newton observations of CYGNUS X-1

    NASA Technical Reports Server (NTRS)

    Mushotzky, Richard F. (Technical Monitor); Miller, Jon

    2005-01-01

    Observations of Cygnus X-1 were first attempted under this program in the spring of 2004, but were complicated by instrumental flaring problems. Successful observations were completed in the fall of 2004, and processed data were delivered to the PI in the winter and spring of 2005. Thus, focused work on this data was only possible starting in 2005. A preliminary reduction and analysis of data from the EPIC CCD cameras and the Reflection Grating Spectrometer has been made. The EPIC spectra reveal the best example of a broadened, relativistic iron emission line yet found in Cygnus X-1. The Oxygen K-shell region has been shown to be a very complex wavelength range in numerous spectra of accreting sources, but the RGS spectra reveal this region in great detail and will be important in understanding the wind from the 0-type donor star that is focused onto the black hole in Cygnus X-1.

  3. Investigating the Galactic supernova remnant Kes 78 with XMM-Newton

    NASA Astrophysics Data System (ADS)

    Miceli, Marco; Bamba, Aya; Orlando, Salvatore; Bocchino, Fabrizio

    2016-06-01

    The galactic supernova remnant Kes 78 is associated with a HESS gamma-ray source and its X-ray emission has been recently revealed by Suzaku observations which have found indications for a hard X-ray component in the spectra. We analyzed an XMM-Newton EPIC observation of Kes 78 and studied the spatial distribution of the physical and chemical properties of the X-ray emitting plasma. The EPIC data unveiled a very complex morphology for the soft X-ray emission. We performed image analysis and spatially resolved spectral analysis finding indications for the interaction of the remnant with a local molecular cloud. Finally, we investigated the origin of the hard X-ray emitting component.

  4. Investigating the galactic Supernova Remnant Kes 78 with XMM-Newton

    NASA Astrophysics Data System (ADS)

    Miceli, M.; Bamba, A.; Orlando, S.; Bocchino, F.

    2016-06-01

    The galactic supernova remnant Kes 78 is associated with a HESS gamma-ray source and its X-ray emission has been recently revealed by Suzaku observations which have found indications for a hard X-ray component in the spectra. We analyzed an XMM-Newton EPIC observation of Kes 78 and studied the spatial distribution of the physical and chemical properties of the X-ray emitting plasma. The EPIC data unveiled a very complex morphology for the soft X-ray emission. We performed image analysis and spatially resolved spectral analysis finding indications for the interaction of the remnant with a local molecular cloud. Finally, we investigated the origin of the hard X-ray emitting component.

  5. From victim to heroine: children's stories revisited.

    PubMed

    Turkel, Ann Ruth

    2002-01-01

    The need to escape reality and the taste for adventure with the unknown fills a universal need for both adults and children. Fairy tales have a powerful grip on the imagination because they are homespun versions of myths and have passionate intensity without epic grandeur. The happy ending of fairy tales reflects gender stereotyping because the heroine usually does very little except sit, wish, and wait for marriage. She has no control over her destiny and no active involvement in selecting or planning her future. These heroines are really passive victims. Sexism was once rampant in children's books. The Oz books, with their independent, courageous, and active heroine were way ahead of their time. The advent of women's liberation has led to a reappraisal of the female in folk literature. Anthropologists have now discovered stories of admirable women who were strong characters in their own epic dramas.

  6. From victim to heroine: children's stories revisited.

    PubMed

    Turkel, Ann Ruth

    2002-01-01

    The need to escape reality and the taste for adventure with the unknown fills a universal need for both adults and children. Fairy tales have a powerful grip on the imagination because they are homespun versions of myths and have passionate intensity without epic grandeur. The happy ending of fairy tales reflects gender stereotyping because the heroine usually does very little except sit, wish, and wait for marriage. She has no control over her destiny and no active involvement in selecting or planning her future. These heroines are really passive victims. Sexism was once rampant in children's books. The Oz books, with their independent, courageous, and active heroine were way ahead of their time. The advent of women's liberation has led to a reappraisal of the female in folk literature. Anthropologists have now discovered stories of admirable women who were strong characters in their own epic dramas. PMID:12064035

  7. Proceedings of the PILAC optics workshop

    SciTech Connect

    Not Available

    1991-11-01

    This report contains viewgraphs on the following topics: PILAC Overview; PILAC Injection Line; PILAC General-Purpose Line Design; Program RAYTRACE; Design & Performance of MRS; Program MOTER; Recent Upgrades of MOTER; Use of MOTER at Michigan State; Spectrometer Design at Michigan State; Use of MOTER at CEBAF & Related Topics; TOSCA Calculations at CEBAF; TOSCA Calculations for PILAC; Measurements of EPICS Quadrupoles; Quadrupole Measurements and Analysis at Bates Laboratory; Analysis of 3D Quadrupole Data; Quadrupole 3D Fringe Fields (Theoretical Lecture); Analysis of 3D Field Data; Analysis of Dipole Fringe Fields; Quadrupoles with Perfect N=2 Symmetry; CEBAF Superconducting Cos (20) Quadrupole; Upgrades to TRANSPORT and TURTLE; Optics using Differential Algebra; and A Possible Test of Quad Optics Using EPICS.

  8. Simultaneous X-Ray and Optical Timing Observations of GX 339-4

    NASA Technical Reports Server (NTRS)

    Kaaret, Philip; Mushotzky, Richard F. (Technical Monitor)

    2004-01-01

    The goal of this proposal was to perform the first comprehensive study of the correlated x-ray and optical variability of the Galactic accreting black hole candidate GX 339-4 using the x-ray and optical instruments on XMM-Newton. With these observations, we hoped to make significant progress in understanding the coupled inflow - outflow system around a persistently accreting stellar mass black hole. The work on this project is being led by the European Science PI. The data is fully reduced. This includes the data analysis for all of the instruments on XMM-Newton, the EPIC-PN, the EPIC-MOS, the RGS, and the OM. The results are now being prepared for results for publication and will be submitted for publication after the completion of this grant.

  9. Outbursts in Two New Cool Pulsating DA White Dwarfs

    NASA Astrophysics Data System (ADS)

    Bell, Keaton J.; Hermes, J. J.; Montgomery, M. H.; Gentile Fusillo, N. P.; Raddi, R.; Gänsicke, B. T.; Winget, D. E.; Dennihy, E.; Gianninas, A.; Tremblay, P.-E.; Chote, P.; Winget, K. I.

    2016-10-01

    The unprecedented extent of coverage provided by Kepler observations recently revealed outbursts in two hydrogen-atmosphere pulsating white dwarfs (DAVs) that cause hours-long increases in the overall mean flux of up to 14%. We have identified two new outbursting pulsating white dwarfs in K2, bringing the total number of known outbursting white dwarfs to four. EPIC 211629697, with {T}{eff} = 10,780 ± 140 K and {log} g = 7.94 ± 0.08, shows outbursts recurring on average every 5.0 days, increasing the overall flux by up to 15%. EPIC 229227292, with {T}{eff} = 11,190 ± 170 K and {log} g = 8.02 ± 0.05, has outbursts that recur roughly every 2.4 days with amplitudes up to 9%. We establish that only the coolest pulsating white dwarfs within a small temperature range near the cool, red edge of the DAV instability strip exhibit these outbursts.

  10. Overview Of Control System For Jefferson Lab`s High Power Free Electron Laser

    SciTech Connect

    Hofler, A. S.; Grippo, A. C.; Keesee, M. S.; Song, J.

    1997-12-31

    In this paper the current plans for the control system for Thomas Jefferson National Accelerator Facility`s (Jefferson Lab`s) Infrared Free Electron Laser (FEL) are presented. The goals for the FEL control system are fourfold: (1) to use EPICS and EPICS compatible tools, (2) to use VME and Industry Pack (IPs) interfaces for FEL specific devices such as controls and diagnostics for the drive laser, high power optics, photocathode gun and electron-beam diagnostics, (3) to migrate Continuous Electron Beam Accelerator Facility (CEBAF) technologies to VME when possible, and (4) to use CAMAC solutions for systems that duplicate CEBAF technologies such as RF linacs and DC magnets. This paper will describe the software developed for FEL specific devices and provide an overview of the FEL control system.

  11. A System for Exchanging Control and Status Messages in the NOvA Data Acquisition

    SciTech Connect

    Biery, K.A.; Cooper, R.G.; Foulkes, S.C.; Guglielmo, G.M.; Piccoli, L.P.; Votava, M.E.V.; /Fermilab

    2007-04-01

    In preparation for NOvA, a future neutrino experiment at Fermilab, we are developing a system for passing control and status messages in the data acquisition system. The DAQ system will consist of applications running on approximately 450 nodes. The message passing system will use a publish-subscribe model and will provide support for sending messages and receiving the associated replies. Additional features of the system include a layered architecture with custom APIs tailored to the needs of a DAQ system, the use of an open source messaging system for handling the reliable delivery of messages, the ability to send broadcasts to groups of applications, and APIs in Java, C++, and Python. Our choice for the open source system to deliver messages is EPICS. We will discuss the architecture of the system, our experience with EPICS, and preliminary test results.

  12. Application of a Systems Pharmacology-Based Placebo Population Model to Analyze Long-Term Data of Postmenopausal Osteoporosis.

    PubMed

    Berkhout, J; Stone, J A; Verhamme, K M; Stricker, B H; Sturkenboom, M C; Danhof, M; Post, T M

    2015-09-01

    Osteoporosis is a progressive bone disease characterized by decreased bone mass resulting in increased fracture risk. The objective of this investigation was to test whether a recently developed disease systems analysis model for osteoporosis could describe disease progression in a placebo-treated population from the Early Postmenopausal Intervention Cohort (EPIC) study. First, we qualified the model using a subset from the placebo arm of the EPIC study of 222 women who had similar demographic characteristics as the 149 women from the placebo arm of the original population. Second, we applied the model to all 470 women. Bone mineral density (BMD) dynamics were changed to an indirect response model to describe lumbar spine and total hip BMD in this second population. This updated disease systems analysis placebo model describes the dynamics of all biomarkers in the corresponding datasets to a very good approximation; a good description of an individual placebo response will be valuable for evaluating treatments for osteoporosis.

  13. CMB lensing constraints on dark energy and modified gravity scenarios

    SciTech Connect

    Calabrese, Erminia; Cooray, Asantha; Martinelli, Matteo; Melchiorri, Alessandro; Pagano, Luca; Slosar, Anze; Smoot, George F.

    2009-11-15

    Weak gravitational lensing leaves a characteristic imprint on the cosmic microwave background temperature and polarization angular power spectra. Here, we investigate the possible constraints on the integrated lensing potential from future cosmic microwave background angular spectra measurements expected from Planck and EPIC. We find that Planck and EPIC will constrain the amplitude of the integrated projected potential responsible for lensing at 6% and 1% level, respectively, with very little sensitivity to the shape of the lensing potential. We discuss the implications of such a measurement in constraining dark energy and modified gravity scalar-tensor theories. We then discuss the impact of a wrong assumption on the weak lensing potential amplitude on cosmological parameter inference.

  14. Pelvic and lower extremity injuries in Homer's Iliad: a review of the literature.

    PubMed

    Galanakos, Spyridon P; Bot, Arjan G J; Macheras, George A

    2015-01-01

    The Iliad, composed approximately in the middle of the eighth century bc, constitutes the leading and oldest known example of heroic epic. The Homeric epic presents the conflicts that took place during the last year of the 10-year lasting Trojan War, offering a realistic description of battle wounds. We studied the text of The Iliad in ancient Greek and in the translations in modern Greek and English and searched for all recorded injuries to the pelvis and lower extremities. A total of 16 traumatic injuries of pelvis and lower extremities were described, including 7 fatal wounds, while in 9 cases, the outcome was unknown.The Iliad remains the oldest record of Greek medicine and a unique source of surgical history. To study the vividly reported events is a great experience, particularly for a surgeon.

  15. Beam-commissioning study of high-intensity accelerators using virtual accelerator model

    NASA Astrophysics Data System (ADS)

    Harada, H.; Shigaki, K.; Irie, Y.; Noda, F.; Hotchi, H.; Saha, P. K.; Shobuda, Y.; Sako, H.; Furukawa, K.; Machida, S.

    2009-04-01

    In order to control large-scale accelerators efficiently, a control system with a virtual accelerator model was constructed. The virtual accelerator (VA) is an on-line beam simulator provided with a beam monitor scheme. The VA is based upon the Experimental Physics and Industrial Control System (EPICS) and is configured under the EPICS input/output controller (IOC) in parallel with a real accelerator (RA). Thus, the machine operator can access the parameters of the RA through the channel access client and then feed them to the VA, and vice versa. Such a control scheme facilitates developments of the commissioning tools, feasibility study of the proposed accelerator parameters and examination of the measured accelerator data. This paper describes the beam commissioning results and activities by using the VA at the J-PARC 3-GeV rapid-cycling synchrotron (RCS).

  16. Preparation by coaxial electrospinning and characterization of membranes releasing (-) epicatechin as scaffold for tissue engineering.

    PubMed

    Castillo-Ortega, M M; Montaño-Figueroa, A G; Rodríguez-Félix, D E; Prado-Villegas, G; Pino-Ocaño, K P; Valencia-Córdova, M J; Quiroz-Castillo, J M; Herrera-Franco, P J

    2015-01-01

    Optimal conditions for the preparation of a composite material of fibers of cellulose acetate (CA) and poly(vinyl pyrrolidone) (PVP), containing epicatechin (Epic) within the fiber CA/PVP-Epic/CA, were found. The morphology and physical/chemical properties of the fibrous membranes containing CA, PVP, and epicatechin were characterized using FTIR spectroscopy, thermal analysis, SEM, TEM, and natural weathering. Also, mechanical characterization of the fibers showed that tensile strength of the membrane was not affected by the presence of epicatechin within the fiber as compared with fibers without epicatechin. The effect of the medium on the release rate of epicatechin was also studied. The amount of epicatechin release was higher in water, 79.6%, and 31% in MesenCult medium. These results showed that these composite materials are recommended for cardiac tissue engineering; furthermore, using these materials allows precise release of the epicatechin in the damaged tissue. PMID:25491975

  17. Challenges in creating an opt-in biobank with a registrar-based consent process and a commercial EHR

    PubMed Central

    Corsmo, Jeremy; Barnes, Michael G; Pollick, Carrie; Chalfin, Jamie; Nix, Jeremy; Smith, Christopher; Ganta, Rajesh

    2012-01-01

    Residual clinical samples represent a very appealing source of biomaterial for translational and clinical research. We describe the implementation of an opt-in biobank, with consent being obtained at the time of registration and the decision stored in our electronic health record, Epic. Information on that decision, along with laboratory data, is transferred to an application that signals to biobank staff whether a given sample can be kept for research. Investigators can search for samples using our i2b2 data warehouse. Patient participation has been overwhelmingly positive and much higher than anticipated. Over 86% of patients provided consent and almost 83% requested to be notified of any incidental research findings. In 6 months, we obtained decisions from over 18 000 patients and processed 8000 blood samples for storage in our research biobank. However, commercial electronic health records like Epic lack key functionality required by a registrar-based consent process, although workarounds exist. PMID:22878682

  18. Development of the integrated control system for the microwave ion source of the PEFP 100-MeV proton accelerator

    NASA Astrophysics Data System (ADS)

    Song, Young-Gi; Seol, Kyung-Tae; Jang, Ji-Ho; Kwon, Hyeok-Jung; Cho, Yong-Sub

    2012-07-01

    The Proton Engineering Frontier Project (PEFP) 20-MeV proton linear accelerator is currently operating at the Korea Atomic Energy Research Institute (KAERI). The ion source of the 100-MeV proton linac needs at least a 100-hour operation time. To meet the goal, we have developed a microwave ion source that uses no filament. For the ion source, a remote control system has been developed by using experimental physics and the industrial control system (EPICS) software framework. The control system consists of a versa module europa (VME) and EPICS-based embedded applications running on a VxWorks real-time operating system. The main purpose of the control system is to control and monitor the operational variables of the components remotely and to protect operators from radiation exposure and the components from critical problems during beam extraction. We successfully performed the operation test of the control system to confirm the degree of safety during the hardware performance.

  19. Transport of lipopolysaccharide across the cell envelope: the long road of discovery.

    PubMed

    Ruiz, Natividad; Kahne, Daniel; Silhavy, Thomas J

    2009-09-01

    Intracellular lipid transport is poorly understood. Genetic studies to identify lipid-transport factors are complicated by the essentiality of many lipids, whereas biochemical and cell biology approaches aiming to determine localization and mechanisms of lipid transport are often challenged by the lack of adequate technology. Here, we review the epic history of how different approaches, technological advances and ingenuity contributed to the recent discovery of a multi-protein pathway that transports lipopolysaccharide across the envelope of Gram-negative bacteria.

  20. Beta Decay: A Physics Garden of Earthly Delights

    NASA Astrophysics Data System (ADS)

    Robertson, R. G. Hamish

    2014-03-01

    From the beginning, beta decay has tormented and delighted us with puzzles and enlightenment. A significant part of our present understanding of subatomic physics has emerged from the experimental and theoretical struggle with its mysteries. We reflect on several of the epic victories in this struggle, and look ahead to where ongoing research might lead us in the understanding of fundamental symmetries and neutrinos. Research supported under DOE grant DE-FG02-97ER41020.