The Inter-Valley Soil Comparative Survey: the ecology of Dry Valley edaphic microbial communities

PubMed Central

Lee, Charles K; Barbier, Béatrice A; Bottos, Eric M; McDonald, Ian R; Cary, Stephen Craig

2012-01-01

Recent applications of molecular genetics to edaphic microbial communities of the McMurdo Dry Valleys and elsewhere have rejected a long-held belief that Antarctic soils contain extremely limited microbial diversity. The Inter-Valley Soil Comparative Survey aims to elucidate the factors shaping these unique microbial communities and their biogeography by integrating molecular genetic approaches with biogeochemical analyses. Although the microbial communities of Dry Valley soils may be complex, there is little doubt that the ecosystem's food web is relatively simple, and evidence suggests that physicochemical conditions may have the dominant role in shaping microbial communities. To examine this hypothesis, bacterial communities from representative soil samples collected in four geographically disparate Dry Valleys were analyzed using molecular genetic tools, including pyrosequencing of 16S rRNA gene PCR amplicons. Results show that the four communities are structurally and phylogenetically distinct, and possess significantly different levels of diversity. Strikingly, only 2 of 214 phylotypes were found in all four valleys, challenging a widespread assumption that the microbiota of the Dry Valleys is composed of a few cosmopolitan species. Analysis of soil geochemical properties indicated that salt content, alongside altitude and Cu2+, was significantly correlated with differences in microbial communities. Our results indicate that the microbial ecology of Dry Valley soils is highly localized and that physicochemical factors potentially have major roles in shaping the microbiology of ice-free areas of Antarctica. These findings hint at links between Dry Valley glacial geomorphology and microbial ecology, and raise previously unrecognized issues related to environmental management of this unique ecosystem. PMID:22170424

Coordinating Chemical and Mineralogical Analyses of Antarctic Dry Valley Sediments as Potential Analogs for Mars

NASA Technical Reports Server (NTRS)

Patel, S. N.; Bishop, J. L.; Englert, P.; Gibson, E. K.

2015-01-01

The Antarctic Dry Valleys (ADV) provide a unique terrestrial analog for Martian surface processes as they are extremely cold and dry sedimentary environments. The surface geology and the chemical composition of the Dry Valleys that are similar to Mars suggest the possible presence of these soil-formation processes on Mars. The soils and sediments from Wright Valley, Antarctica were investigated in this study to examine mineralogical and chemical changes along the surface layer in this region and as a function of depth. Surface samples collected near Prospect Mesa and Don Juan Pond of the ADV were analyzed using visible/near-infrared (VNIR) and mid-IR reflectance spectroscopy and major and trace element abundances.

Taxonomic and Functional Diversity of Soil and Hypolithic Microbial Communities in Miers Valley, McMurdo Dry Valleys, Antarctica.

PubMed

Wei, Sean T S; Lacap-Bugler, Donnabella C; Lau, Maggie C Y; Caruso, Tancredi; Rao, Subramanya; de Los Rios, Asunción; Archer, Stephen K; Chiu, Jill M Y; Higgins, Colleen; Van Nostrand, Joy D; Zhou, Jizhong; Hopkins, David W; Pointing, Stephen B

2016-01-01

The McMurdo Dry Valleys of Antarctica are an extreme polar desert. Mineral soils support subsurface microbial communities and translucent rocks support development of hypolithic communities on ventral surfaces in soil contact. Despite significant research attention, relatively little is known about taxonomic and functional diversity or their inter-relationships. Here we report a combined diversity and functional interrogation for soil and hypoliths of the Miers Valley in the McMurdo Dry Valleys of Antarctica. The study employed 16S rRNA fingerprinting and high throughput sequencing combined with the GeoChip functional microarray. The soil community was revealed as a highly diverse reservoir of bacterial diversity dominated by actinobacteria. Hypolithic communities were less diverse and dominated by cyanobacteria. Major differences in putative functionality were that soil communities displayed greater diversity in stress tolerance and recalcitrant substrate utilization pathways, whilst hypolithic communities supported greater diversity of nutrient limitation adaptation pathways. A relatively high level of functional redundancy in both soil and hypoliths may indicate adaptation of these communities to fluctuating environmental conditions.

Occurrence of soil water repellency in arid and humid climates

NASA Astrophysics Data System (ADS)

Jaramillo, D. F.; Dekker, L. W.; Ritsema, C. J.; Hendrickx, J. M. H.

2000-05-01

Soil water repellency generally tends to increase during dry weather while it decreases or completely vanishes after heavy precipitation or during extended periods with high soil water contents. These observations lead to the hypothesis that soil water repellency is common in dry climates and rare in humid climates. The study objective is to test this hypothesis by examining the occurrence of soil water repellency in an arid and humid climate. The main conclusion of this study is that the effect of climate on soil water repellency is very limited. Field observations in the arid Middle Rio Grande Basin in New Mexico (USA) and the humid Piedras Blancas Watershed in Colombia show that the main impact of climate seems to be in which manner it affects the production of organic matter. An extremely dry climate will result in low organic matter production rates and, therefore, less potential for the development of soil water repellency. On the other hand, a very humid climate is favorable for organic matter production and, therefore, for the development of water repellency.

Soil moisture and biogeochemical factors influence the distribution of annual Bromus species

Treesearch

Jayne Belnap; John M. Stark; Benjamin M. Rau; Edith B. Allen; Susan Phillips

2016-01-01

Abiotic factors have a strong influence on where annual Bromus species are found. At the large regional scale, temperature and precipitation extremes determine the boundaries of Bromus occurrence. At the more local scale, soil characteristics and climate influence distribution, cover, and performance. In hot, dry, summer-rainfall-dominated deserts (Sonoran, Chihuahuan...

Year-round record of Dry Valley soil CO2 flux provides insights into Antarctic soil dynamics

NASA Astrophysics Data System (ADS)

Risk, D. A.; Lee, C.; Macintyre, C. M.; Cary, C.

2012-12-01

The McMurdo Dry Valleys of Antarctica host extreme soil microbial communities that have been extensively studied within the past decade. Activity of microbial communities is routinely measured via soil CO2 flux, and some useful Antarctic measurements have been made during short Austral summers. These studies are mostly spatial in nature, but temporal patterns are also valuable and may provide insights into critical thresholds and the interplay between various mechanisms that drive CO2 flux and its variation. New membrane-based Forced Diffusion (FD) soil efflux techniques offer promise for this application. The purpose of this study was to use a specially designed FD instrument in Hidden Valley of the Antarctic Dry Valleys to evaluate hardware performance in year-round deployments, and to identify features of interest with respect to soil CO2 flux variation. Overall, the deployment was successful. Small but sustained positive fluxes were present only twice during the year. The first such event was small but consistent and of long duration, occurring in the Austral winter. The second was more volatile and likely of microbial origin, and appeared for roughly a month at the end of the calendar year within the Austral summer. The observed patterns suggest that Hidden Valley soil CO2 fluxes are not solely biological in nature, but likely modulated by a combination of biological, geological, and physical processes, which will be discussed in this presentation. In future studies, additional measurement locations, and simultaneous subsurface and lower atmospheric gradient concentration measurements (power-permitting) would be extremely valuable for interpreting measured fluxes, to help identify advective depletion events, the depth source of fluxes, and changes in soil and atmospheric diffusivities.

[Needles stable carbon isotope composition and traits of Pinus sylvestris var. mongolica in sparse wood grassland in south edge of Keerqin Sandy Land under the conditions of different precipitation].

PubMed

Song, Li-Ning; Zhu, Jiao-Jun; Li, Ming-Cai; Yan, Tao; Zhang, Jin-Xin

2012-06-01

A comparative study was conducted on the needles stable carbon isotope composition (delta13 C), specific leaf area (SLA), and dry matter content (DMC) of 19-year-old Pinus sylvestris var. mongolica trees in a sparse wood grassland in the south edge of Keerqin Sandy Land under the conditions of extreme drought and extreme wetness, aimed to understand the water use of Pinus sylvestris under the conditions of extreme precipitation. The soil water content and groundwater level were also measured. In the dry year (2009), the soil water content in the grassland was significantly lower than that in the wet year (2010), but the delta13C values of the current year-old needles had no significant difference between the two years and between the same months of the two years. The SLA of the current year-old needles was significantly lower in the dry year than in the wet year, but the DMC had no significant difference between the two years. Under the conditions of the two extreme precipitations, the water use efficiency of the trees did not vary remarkably, and the trees could change their needles SLA to adapt the variations of precipitation. For the test ecosystem with a groundwater level more than 3.0 m, extreme drought could have no serious impact on the growth and survival of the trees.

Comparative activity and functional ecology of permafrost soils and lithic niches in a hyper-arid polar desert.

PubMed

Goordial, Jacqueline; Davila, Alfonso; Greer, Charles W; Cannam, Rebecca; DiRuggiero, Jocelyne; McKay, Christopher P; Whyte, Lyle G

2017-02-01

Permafrost in the high elevation McMurdo Dry Valleys of Antarctica ranks among the driest and coldest on Earth. Permafrost soils appear to be largely inhospitable to active microbial life, but sandstone lithic microhabitats contain a trophically simple but functional cryptoendolithic community. We used metagenomic sequencing and activity assays to examine the functional capacity of permafrost soils and cryptoendolithic communities in University Valley, one of the most extreme regions in the Dry Valleys. We found metagenomic evidence that cryptoendolithic microorganisms are adapted to the harsh environment and capable of metabolic activity at in situ temperatures, possessing a suite of stress response and nutrient cycling genes to fix carbon under the fluctuating conditions that the sandstone rock would experience during the summer months. We additionally identified genes involved in microbial competition and cooperation within the cryptoendolithic habitat. In contrast, permafrost soils have a lower richness of stress response genes, and instead the metagenome is enriched in genes involved with dormancy and sporulation. The permafrost soils also have a large presence of phage genes and genes involved in the recycling of cellular material. Our results underlie two different habitability conditions under extreme cold and dryness: the permafrost soil which is enriched in traits which emphasize survival and dormancy, rather than growth and activity; and the cryptoendolithic environment that selects for organisms capable of growth under extremely oligotrophic, arid and cold conditions. This study represents the first metagenomic interrogation of Antarctic permafrost and polar cryptoendolithic microbial communities. © 2016 Society for Applied Microbiology and John Wiley & Sons Ltd.

Towards prediction of heatwaves based on the complementary relationship between actual and potential evaporation - energy partitioning and hydrologic attributes

NASA Astrophysics Data System (ADS)

Or, D.; Aminzadeh, M.; Roderick, M. L.

2017-12-01

Prediction of extreme climate events such as heatwaves that are characterized by prolonged periods of high air temperatures (accompanied by low precipitation and high radiation) provides an opportunity to potentially mitigate the associated environmental, social and economic impacts. Vegetation may respond to these extreme conditions by reducing evaporative flux either due to soil water depletion or inability to meet the atmospheric evaporative demand (high canopy resistance). We implement a newly generalized Complementary Relationship (CR) for spatially heterogeneous land surfaces to predict the actual evaporation from drying landscapes covered by different vegetation types (i.e., grassland and forest). A strong correlation between air temperature and sensible heat flux anomalies identified from FLUXNET network data suggests that abrupt changes in sensible heat flux above climatological means can serve as indicators for predicting the onset of a heatwave. We thus capitalize on the inherent coupling between evaporative and sensible heat fluxes linked to moisture availability within the CR framework to predict rapid increase in regional sensible heat flux associated with soil drying (low precipitation) or with extreme evaporative demand (high radiation) while soil moisture is not limiting. The proposed approach evaluated using FLUXNET datasets provides an energy constraint framework based on the CR concept to obtain new insights into the onset of heatwaves and climate extremes such as regional droughts.

Nearing the cold-arid limits of microbial life in permafrost of an upper dry valley, Antarctica.

PubMed

Goordial, Jacqueline; Davila, Alfonso; Lacelle, Denis; Pollard, Wayne; Marinova, Margarita M; Greer, Charles W; DiRuggiero, Jocelyn; McKay, Christopher P; Whyte, Lyle G

2016-07-01

Some of the coldest and driest permafrost soils on Earth are located in the high-elevation McMurdo Dry Valleys (MDVs) of Antarctica, but little is known about the permafrost microbial communities other than that microorganisms are present in these valleys. Here, we describe the microbiology and habitable conditions of highly unique dry and ice-cemented permafrost in University Valley, one of the coldest and driest regions in the MDVs (1700 m above sea level; mean temperature -23 °C; no degree days above freezing), where the ice in permafrost originates from vapour deposition rather than liquid water. We found that culturable and total microbial biomass in University Valley was extremely low, and microbial activity under ambient conditions was undetectable. Our results contrast with reports from the lower-elevation Dry Valleys and Arctic permafrost soils where active microbial populations are found, suggesting that the combination of severe cold, aridity, oligotrophy of University Valley permafrost soils severely limit microbial activity and survival.

Nearing the cold-arid limits of microbial life in permafrost of an upper dry valley, Antarctica

PubMed Central

Goordial, Jacqueline; Davila, Alfonso; Lacelle, Denis; Pollard, Wayne; Marinova, Margarita M; Greer, Charles W; DiRuggiero, Jocelyn; McKay, Christopher P; Whyte, Lyle G

2016-01-01

Some of the coldest and driest permafrost soils on Earth are located in the high-elevation McMurdo Dry Valleys (MDVs) of Antarctica, but little is known about the permafrost microbial communities other than that microorganisms are present in these valleys. Here, we describe the microbiology and habitable conditions of highly unique dry and ice-cemented permafrost in University Valley, one of the coldest and driest regions in the MDVs (1700 m above sea level; mean temperature −23 °C; no degree days above freezing), where the ice in permafrost originates from vapour deposition rather than liquid water. We found that culturable and total microbial biomass in University Valley was extremely low, and microbial activity under ambient conditions was undetectable. Our results contrast with reports from the lower-elevation Dry Valleys and Arctic permafrost soils where active microbial populations are found, suggesting that the combination of severe cold, aridity, oligotrophy of University Valley permafrost soils severely limit microbial activity and survival. PMID:27323892

Soil Moisture Anomaly as Predictor of Crop Yield Deviation in Germany

NASA Astrophysics Data System (ADS)

Peichl, Michael; Thober, Stephan; Schwarze, Reimund; Meyer, Volker; Samaniego, Luis

2016-04-01

Natural hazards, such as droughts, have the potential to drastically diminish crop yield in rain-fed agriculture. For example, the drought in 2003 caused direct losses of 1.5 billion EUR only in Germany (COPA-COGECA 2003). Predicting crop yields allows to economize the mitigation of risks of weather extremes. Economic approaches for quantifying agricultural impacts of natural hazards mainly rely on temperature and related concepts. For instance extreme heat over the growing season is considered as best predictor of corn yield (Auffhammer and Schlenker 2014). However, those measures are only able to provide a proxy for the available water content in the root zone that ultimately determines plant growth and eventually crop yield. The aim of this paper is to analyse whether soil moisture has a causal effect on crop yield that can be exploited in improving adaptation measures. For this purpose, reduced form fixed effect panel models are developed with yield as dependent variable for both winter wheat and silo maize crops. The explanatory variables used are soil moisture anomalies, precipitation and temperature. The latter two are included to estimate the current state of the water balance. On the contrary, soil moisture provides an integrated signal over several months. It is also the primary source of water supply for plant growth. For each crop a single model is estimated for every month within the growing period to study the variation of the effects over time. Yield data is available for Germany as a whole on the level of administrative districts from 1990 to 2010. Station data by the German Weather Service are obtained for precipitation and temperature and are aggregated to the same spatial units. Simulated soil moisture computed by the mesoscale Hydrologic Model (mHM, www.ufz.de/mhm) is transformed into Soil Moisture Index (SMI), which represents the monthly soil water quantile and hence accounts directly for the water content available to plants. The results indicate that wet and dry soil moisture anomalies have a causal effect on crop yields. However, the effects vary in magnitude and direction for each crop depending on the month. For instance dry soil moisture anomalies in July, August and September reduce silo maize yield more than ten percent with respect to average conditions. Extreme wetness, however, increases silo maize yield in the same time period. A negative effect is observed for winter wheat during this period for both wet and dry anomalies. The reduction due to dry anomalies is smaller for winter wheat than for silo maize. This study shows that the impact of soil moisture anomalies varies dependent on months and crops. These evolving patterns provide new insights to improve adaptation measures for extreme soil moisture conditions. References Auffhammer, M., and W. Schlenker. 2014. "Empirical studies on agricultural impacts and adaptation." Energy Economics 46:555-561. COPA-COGECA. 2003. "Assessment of the impact of the heat wave and drought of the summer 2003 on agriculture and forestry." In Committee of Agricultural Organisations in the European Union General Committee for Agricultural Cooperation in the European Union, Brussels. p. 15.

Long-term evaluation of the fate of sulfur mustard on dry and humid soils, asphalt, and concrete.

PubMed

Mizrahi, Dana M; Goldvaser, Michael; Columbus, Ishay

2011-04-15

The long-term fate of the blister agent sulfur mustard (HD, bis(2-chloroethyl)sulfide) was determined in a variety of commercial and natural matrices. HD was found to be extremely stable in dry matrices for over a year. The addition of 5% water to the matrices induced slow degradation of HD, which lasted several months. The major degradation product in sands and asphalt was found to be a sulfonium salt, S[CH(2)CH(2)S(+)(CH(2)CH(2)OH)(2)](2) (H-2TG). Red loam soil, which has not been examined before, exhibited strong interaction with HD, both in dry form and in the presence of water. Humid red loam soil gave rise to unique oxidative degradation products. On humid concrete HD degraded to a complex mixture of products, including vinyls. This may be attributed to the basic sites incorporated in concrete.

A 323-year long reconstruction of drought for SW Romania based on black pine (Pinus Nigra) tree-ring widths.

PubMed

Levanič, Tom; Popa, Ionel; Poljanšek, Simon; Nechita, Constantin

2013-09-01

Increase in temperature and decrease in precipitation pose a major future challenge for sustainable ecosystem management in Romania. To understand ecosystem response and the wider social consequences of environmental change, we constructed a 396-year long (1615-2010) drought sensitive tree-ring width chronology (TRW) of Pinus nigra var. banatica (Georg. et Ion.) growing on steep slopes and shallow organic soil. We established a statistical relationship between TRW and two meteorological parameters-monthly sum of precipitation (PP) and standardised precipitation index (SPI). PP and SPI correlate significantly with TRW (r = 0.54 and 0.58) and are stable in time. Rigorous statistical tests, which measure the accuracy and prediction ability of the model, were all significant. SPI was eventually reconstructed back to 1688, with extreme dry and wet years identified using the percentile method. By means of reconstruction, we identified two so far unknown extremely dry years in Romania--1725 and 1782. Those 2 years are almost as dry as 1946, which was known as the "year of great famine." Since no historical documents for these 2 years were available in local archives, we compared the results with those from neighbouring countries and discovered that both years were extremely dry in the wider region (Slovakia, Hungary, Anatolia, Syria, and Turkey). While the 1800-1900 period was relatively mild, with only two moderately extreme years as far as weather is concerned, the 1900-2009 period was highly salient owing to the very high number of wet and dry extremes--five extremely wet and three extremely dry events (one of them in 1946) were identified.

The Arctic CH4 sink and its implications for the permafrost carbon feedbacks to the global climate system

NASA Astrophysics Data System (ADS)

Juncher Jørgensen, Christian; Christiansen, Jesper; Mariager, Tue; Hugelius, Gustaf

2016-04-01

Using atmospheric methane (CH4), certain soil microbes are able to sustain their metabolism, and in turn remove this powerful greenhouse gas from the atmosphere. While the process of CH4 oxidation is a common feature in most natural and unmanaged ecosystems in temperate and boreal ecosystems, the interactions between soil physical properties and abiotic process drivers, net landscape exchange and spatial patterns across Arctic drylands remains highly uncertain. Recent works show consistent CH4 comsumption in upland dry tundra soils in Arctic and High Arctic environments (Christiansen et al., 2014, Biogeochemistry 122; Jørgensen et al., 2015, Nature Geoscience 8; Lau et al., 2015, The ISME Journal 9). In these dominantly dry or barren soil ecosystems, CH4 consumption has been observed to significantly exceed the amounts of CH4 emitted from adjacent wetlands. These observations point to a potentially important but largely overlooked component of the global soil-climate system interaction and a counterperspective to the conceptual understanding of the Arctic being a only a source of CH4. However, due to our limited knowledge of spatiotemporal occurrence of CH4 consumption across a wider range of the Arctic landscape we are left with substantial uncertainites and an overall unconstrained range estimate of this terrestrial CH4 sink and its potential effects on permafrost carbon feedback to the atmospheric CH4 concentration. To address this important knowledge gap and identify the most relevant spatial scaling parameters, we studied in situ CH4 net exchange across a large landscape transect on West Greenland. The transect representated soils formed from the dominant geological parent materials of dry upland tundra soils found in the ice-free land areas of Western Greenland, i.e. 1) granitic/gneissic parent material, 2) basaltic parent material and 3) sedimentary deposits. Results show that the dynamic variations in soil physical properties and soil hydrology exerts an overriding control on the net CH4 consumption both within and across these well-aerated soil systems. Quite surprisingly, we found high CH4 sink rates in conditions when soils were both extremely thin (< 10 cm to bedrock), very dry (< 5-10 % soil moisture), weakly developed and exposed to harsh environmental conditions such as mountain tops, alpine tundra and abrasion plateaus, which are historically overlooked "extreme soils" regarding CH4 exchange. The results show that the physical areas and landforms where CH4 oxidation and net CH4 deposition occurs has not been delimited for the Arctic. This calls for a revised understanding of the role of CH4 consumption in natural drylands and extreme environments for the net CH4 budget at the circumpolar scale. In these sensitive regions, changes towards warmer and drier soil conditions in some areas as a consequence of a warming Arctic could favor the activity of the CH4 oxidizing bacteria, leading to future increase in net atmospheric CH4 consumption in dry and barren land areas. This could have far-reaching implications for the permafrost carbon feedback to the global climate system and how we integrate the soil CH4 consumption feedback in Earth Systems Model simulating the Artic CH4 budget.

A case study for evaluating potential soil sensitivity in aridland systems.

PubMed

Peterman, Wendy L; Ferschweiler, Ken

2016-04-01

Globally, ecosystems are subjected to prolonged droughts and extreme heat events, leading to forest die-offs and dominance shifts in vegetation. Some scientists and managers view soil as the main resource to be considered in monitoring ecosystem responses to aridification. As the medium through which precipitation is received, stored, and redistributed for plant use, soil is an important factor in the sensitivity of ecosystems to a drying climate. This study presents a novel approach to evaluating where on a landscape soils may be most sensitive to drying, making them less resilient to disturbance, and where potential future vegetation changes could lead to such disturbance. The drying and devegetation of arid lands can increase wind erosion, contributing to aerosol and dust emissions. This has implications for air quality, human health, and water resources. This approach combines soil data with vegetation simulations, projecting future vegetation change, to create maps of potential areas of concern for soil sensitivity and dust production in a drying climate. Consistent with recent observations, the projections show shifts from grasslands and woodlands to shrublands in much of the southwestern region. An increase in forested area occurs, but shifts in the dominant types and spatial distribution of the forests also are seen. A net increase in desert ecosystems in the region and some changes in alpine and tundra ecosystems are seen. Approximately 124,000 km(2) of soils flagged as "sensitive" are projected to have vegetation change between 2041 and 2050, and 82,927 km(2) of soils may become sensitive because of future vegetation changes. These maps give managers a way to visualize and identify where soils and vegetation should be investigated and monitored for degradation in a drying climate, so restoration and mitigation strategies can be focused in these areas. © 2015 SETAC.

Patterns of nocturnal rehydration in root tissues of Vaccinium corymbosum L. under severe drought conditions

PubMed Central

Valenzuela-Estrada, Luis R.; Richards, James H.; Diaz, Andres; Eissensat, David M.

2009-01-01

Although roots in dry soil layers are commonly rehydrated by internal hydraulic redistribution during the nocturnal period, patterns of tissue rehydration are poorly understood. Rates of nocturnal rehydration were examined in roots of different orders in Vaccinium corymbosum L. ‘Bluecrop’ (Northern highbush blueberry) grown in a split-pot system with one set of roots in relatively moist soil and the other set of roots in dry soil. Vaccinium is noted for a highly branched and extremely fine root system. It is hypothesized that nocturnal root tissue rehydration would be slow, especially in the distal root orders because of their greater hydraulic constraints (smaller vessel diameters and fewer number of vessels). Vaccinium root hydraulic properties delayed internal water movement. Even when water was readily available to roots in the wet soil and transpiration was minimal, it took a whole night-time period of 12 h for the distal finest roots (1st to 4th order) under dry soil conditions to reach the same water potentials as fine roots in moist soil (1st to 4th order). Even though roots under dry soil equilibrated with roots in moist soil, the equilibrium point reached before sunrise was about –1.2 MPa, indicating that tissues were not fully rehydrated. Using a single-branch root model, it was estimated that individual roots exhibiting the lowest water potentials in dry soil were 1st order roots (distal finest roots of the root system). However, considered at the branch level, root orders with the highest hydraulic resistances corresponded to the lowest orders of the permanent root system (3rd-, 4th-, and 5th-order roots), thus indicating possible locations of hydraulic safety control in the root system of this species. PMID:19188275

Patterns of nocturnal rehydration in root tissues of Vaccinium corymbosum L. under severe drought conditions.

PubMed

Valenzuela-Estrada, Luis R; Richards, James H; Diaz, Andres; Eissensat, David M

2009-01-01

Although roots in dry soil layers are commonly rehydrated by internal hydraulic redistribution during the nocturnal period, patterns of tissue rehydration are poorly understood. Rates of nocturnal rehydration were examined in roots of different orders in Vaccinium corymbosum L. 'Bluecrop' (Northern highbush blueberry) grown in a split-pot system with one set of roots in relatively moist soil and the other set of roots in dry soil. Vaccinium is noted for a highly branched and extremely fine root system. It is hypothesized that nocturnal root tissue rehydration would be slow, especially in the distal root orders because of their greater hydraulic constraints (smaller vessel diameters and fewer number of vessels). Vaccinium root hydraulic properties delayed internal water movement. Even when water was readily available to roots in the wet soil and transpiration was minimal, it took a whole night-time period of 12 h for the distal finest roots (1st to 4th order) under dry soil conditions to reach the same water potentials as fine roots in moist soil (1st to 4th order). Even though roots under dry soil equilibrated with roots in moist soil, the equilibrium point reached before sunrise was about -1.2 MPa, indicating that tissues were not fully rehydrated. Using a single-branch root model, it was estimated that individual roots exhibiting the lowest water potentials in dry soil were 1st order roots (distal finest roots of the root system). However, considered at the branch level, root orders with the highest hydraulic resistances corresponded to the lowest orders of the permanent root system (3rd-, 4th-, and 5th-order roots), thus indicating possible locations of hydraulic safety control in the root system of this species.

Hydraulic redistribution affects modeled carbon cycling via soil microbial activity and suppressed fire.

PubMed

Fu, Congsheng; Wang, Guiling; Bible, Kenneth; Goulden, Michael L; Saleska, Scott R; Scott, Russell L; Cardon, Zoe G

2018-04-13

Hydraulic redistribution (HR) of water from moist to drier soils, through plant roots, occurs world-wide in seasonally dry ecosystems. Although the influence of HR on landscape hydrology and plant water use has been amply demonstrated, HR's effects on microbe-controlled processes sensitive to soil moisture, including carbon and nutrient cycling at ecosystem scales, remain difficult to observe in the field and have not been integrated into a predictive framework. We incorporated a representation of HR into the Community Land Model (CLM4.5) and found the new model improved predictions of water, energy, and system-scale carbon fluxes observed by eddy covariance at four seasonally dry yet ecologically diverse temperate and tropical AmeriFlux sites. Modeled plant productivity and microbial activities were differentially stimulated by upward HR, resulting at times in increased plant demand outstripping increased nutrient supply. Modeled plant productivity and microbial activities were diminished by downward HR. Overall, inclusion of HR tended to increase modeled annual ecosystem uptake of CO 2 (or reduce annual CO 2 release to the atmosphere). Moreover, engagement of CLM4.5's ground-truthed fire module indicated that though HR increased modeled fuel load at all four sites, upward HR also moistened surface soil and hydrated vegetation sufficiently to limit the modeled spread of dry season fire and concomitant very large CO 2 emissions to the atmosphere. Historically, fire has been a dominant ecological force in many seasonally dry ecosystems, and intensification of soil drought and altered precipitation regimes are expected for seasonally dry ecosystems in the future. HR may play an increasingly important role mitigating development of extreme soil water potential gradients and associated limitations on plant and soil microbial activities, and may inhibit the spread of fire in seasonally dry ecosystems. © 2018 John Wiley & Sons Ltd.

Is soil moisture initialization important for seasonal to decadal predictions?

NASA Astrophysics Data System (ADS)

Stacke, Tobias; Hagemann, Stefan

2014-05-01

The state of soil moisture can can have a significant impact on regional climate conditions for short time scales up to several months. However, focusing on seasonal to decadal time scales, it is not clear whether the predictive skill of global a Earth System Model might be enhanced by assimilating soil moisture data or improving the initial soil moisture conditions with respect to observations. As a first attempt to provide answers to this question, we set up an experiment to investigate the life time (memory) of extreme soil moisture states in the coupled land-atmosphere model ECHAM6-JSBACH, which is part of the Max Planck Institute for Meteorology's Earth System Model (MPI-ESM). This experiment consists of an ensemble of 3 years simulations which are initialized with extreme wet and dry soil moisture states for different seasons and years. Instead of using common thresholds like wilting point or critical soil moisture, the extreme states were extracted from a reference simulation to ensure that they are within the range of simulated climate variability. As a prerequisite for this experiment, the soil hydrology in JSBACH was improved by replacing the bucket-type soil hydrology scheme with a multi-layer scheme. This new scheme is a more realistic representation of the soil, including percolation and diffusion fluxes between up to five separate layers, the limitation of bare soil evaporation to the uppermost soil layer and the addition of a long term water storage below the root zone in regions with deep soil. While the hydrological cycle is not strongly affected by this new scheme, it has some impact on the simulated soil moisture memory which is mostly strengthened due to the additional deep layer water storage. Ensemble statistics of the initialization experiment indicate perturbation lengths between just a few days up to several seasons for some regions. In general, the strongest effects are seen for wet initialization during northern winter over cold and humid regions, while the shortest memory is found during northern spring. For most regions, the soil moisture memory is either sensitive to wet or to dry perturbations, indicating that soil moisture anomalies interact with the respective weather pattern for a given year and might be able to enhance or dampen extreme conditions. To further investigate this effect, the simulations will be repeated using JSBACH with prescribed meteorological forcing to better disentangle the direct effects of soil moisture initialization and the atmospheric response.

Anomalous bioaccumulation of lead in the earthworm Eisenoides lonnbergi (Michaelsen)

USGS Publications Warehouse

Beyer, W. Nelson; Codling, Eton E.; Rutzke, Michael A.

2018-01-01

Lead concentrations in soil organisms are usually well below those in the associated soil and tend to decrease with each higher trophic level in a food chain. Earthworms of the species Eisenoides lonnbergi provide an exception to this observation, accumulating very high concentrations of lead from acidic soils. Earthworms belonging to this species were collected from strongly to extremely acidic soils at 16 sites on a wildlife refuge in Maryland, USA. A lead concentration as high as 766 mg/kg, dry weight, was detected in depurated E. lonnbergi collected from soil containing only 17 mg/kg of lead. Concentration factors (ratio of lead concentration in earthworms to lead concentration in soil, dry wt) were highly variable at the sites, from 1.0 to 83. As suggested previously, lead absorption by earthworms is enhanced in low-calcium soils. The anomalously high concentrations of lead found in E. lonnbergi are more closely correlated with the uptake of calcium from acidic soils than with bioaccessibility of soil lead. 

Assessment of seasonal soil moisture forecasts over Southern South America with emphasis on dry and wet events

NASA Astrophysics Data System (ADS)

Spennemann, Pablo; Rivera, Juan Antonio; Osman, Marisol; Saulo, Celeste; Penalba, Olga

2017-04-01

The importance of forecasting extreme wet and dry conditions from weeks to months in advance relies on the need to prevent considerable socio-economic losses, mainly in regions of large populations and where agriculture is a key value for the economies, like Southern South America (SSA). Therefore, to improve the understanding of the performance and uncertainties of seasonal soil moisture and precipitation forecasts over SSA, this study aims to: 1) perform a general assessment of the Climate Forecast System version-2 (CFSv2) soil moisture and precipitation forecasts; and 2) evaluate the CFSv2 ability to represent an extreme drought event merging observations with forecasted Standardized Precipitation Index (SPI) and the Standardized Soil Moisture Anomalies (SSMA) based on GLDAS-2.0 simulations. Results show that both SPI and SSMA forecast skill are regionally and seasonally dependent. In general a fast degradation of the forecasts skill is observed as the lead time increases with no significant metrics for forecast lead times longer than 2 months. Based on the assessment of the 2008-2009 extreme drought event it is evident that the CFSv2 forecasts have limitations regarding the identification of drought onset, duration, severity and demise, considering both meteorological (SPI) and agricultural (SSMA) drought conditions. These results have some implications upon the use of seasonal forecasts to assist agricultural practices in SSA, given that forecast skill is still too low to be useful for lead times longer than 2 months.

Response of selected microoganisms to experimental planetary environments

NASA Technical Reports Server (NTRS)

Foster, T. L.

1975-01-01

A microbial population profile of mixed Cape Canaveral soil samples is presented. During this investigation a few organisms were isolated which exhibit the ability to grow at 3 C, 32 C, and 55 C. Growth curves are shown for three of these isolates, one of which grows extremely well at all three temperatures. Also included are studies dealing with growth of soil populations at zero and subzero temperatures. Results indicate growth at 0 C and -5 C, but not at 15 C or -65 C. The effect of storage temperature on dry soil is presented, and results show that psychrophilic populations decrease when soil is stored at room temperature, but do not decrease when soil is stored at -65 C. Results of an experiment with the simulated Martian environment are presented and indicate that nonsporeforming rods, sporeforming rods, and cocci can reproduce in the simulated environment when nutrients and moisture are supplied. The sporeforming rods are the predominant suvivors when dry soil is subjected to this environment.

Sensitivity of soil moisture initialization for decadal predictions under different regional climatic conditions in Europe

NASA Astrophysics Data System (ADS)

Khodayar, S.; Sehlinger, A.; Feldmann, H.; Kottmeier, C.

2015-12-01

The impact of soil initialization is investigated through perturbation simulations with the regional climate model COSMO-CLM. The focus of the investigation is to assess the sensitivity of simulated extreme periods, dry and wet, to soil moisture initialization in different climatic regions over Europe and to establish the necessary spin up time within the framework of decadal predictions for these regions. Sensitivity experiments consisted of a reference simulation from 1968 to 1999 and 5 simulations from 1972 to 1983. The Effective Drought Index (EDI) is used to select and quantify drought status in the reference run to establish the simulation time period for the sensitivity experiments. Different soil initialization procedures are investigated. The sensitivity of the decadal predictions to soil moisture initial conditions is investigated through the analysis of water cycle components' (WCC) variability. In an episodic time scale the local effects of soil moisture on the boundary-layer and the propagated effects on the large-scale dynamics are analysed. The results show: (a) COSMO-CLM reproduces the observed features of the drought index. (b) Soil moisture initialization exerts a relevant impact on WCC, e.g., precipitation distribution and intensity. (c) Regional characteristics strongly impact the response of the WCC. Precipitation and evapotranspiration deviations are larger for humid regions. (d) The initial soil conditions (wet/dry), the regional characteristics (humid/dry) and the annual period (wet/dry) play a key role in the time that soil needs to restore quasi-equilibrium and the impact on the atmospheric conditions. Humid areas, and for all regions, a humid initialization, exhibit shorter spin up times, also soil reacts more sensitive when initialised during dry periods. (e) The initial soil perturbation may markedly modify atmospheric pressure field, wind circulation systems and atmospheric water vapour distribution affecting atmospheric stability conditions, thus modifying precipitation intensity and distribution even several years after the initialization.

Seasonal patterns of nitrogen cycling in subtropical short-hydroperiod wetlands: Effects of precipitation and restoration.

PubMed

Liao, Xiaolin; Inglett, Patrick W; Inglett, Kanika S

2016-06-15

In the event of increased frequency of extreme wet or dry events resulting from climate change, it becomes more important to understand the temporal dynamics of soil nitrogen (N) processes in ecosystems. Here, seasonal patterns of N cycling were characterized in subtropical wetlands in Everglades National Park, Florida, USA. Two restored sites and one reference site with different nutrient status, soil depth, and vegetation communities, were selected. Soil available N, microbial biomass, potential N mineralization and denitrification rates, enzyme activities of leucine aminopeptidase (LAP) and N-acetyl-β-d-glucosaminidase (NAG) were measured across the wet and dry seasons from 2010 to 2011. In general, most N processes were significantly correlated with soil water contents (P<0.05) which reflected the precipitation regime. The lower elevation and shallower soil (2-3cm depth) at the restored site may contribute to their higher soil water contents compared to the reference site with ~10cm soil depth, which further led to the earlier peaks of microbial biomass at the two restored sites. Potential N mineralization was positively correlated with LAP at the restored sites whereas with NAG at the reference site (P<0.05), implying that different vegetation composition may provide varying substrates for soil microbes. The build-up of nitrate in the dry spring of 2011 induced a pulse of denitrification after rewetting by a sudden rainfall, implying the presence of a hot moment of denitrification during the dry-rewetting transition period. The decrease of MBC:MBN ratio from dry to wet season indicates a possible microbial composition shift from fungi to bacteria, shedding lights on the potential contribution of fugal groups to denitrification in the dry season. Our study highlight that even under the same climate regime, the small-scale variations could affect the seasonal patterns of N cycling. Copyright © 2016 Elsevier B.V. All rights reserved.

Comparative Activity and Functional Ecology of Permafrost Soils and Lithic Niches in a Hyper-Arid Polar Desert

NASA Technical Reports Server (NTRS)

Goordial, J.; Davila, A.; Greer, C. W.; Cannam, R.; DiRuggiero, J.; McKay, C. P.; Whyte, L. G.

2016-01-01

This study represents the first metagenomic interrogation of Antarctic permafrost and polar cryptoendolithic microbial communities. The results underlie two different habitability conditions in the same location under extreme cold and dryness: the permafrost habitat where viable microbial life and activity is questionable, and the cryptoendolithic habitat which contains organisms capable of growth under the extreme conditions of the Antarctic Dry Valleys.

Relative Influence of Initial Surface and Atmospheric Conditions on Seasonal Water and Energy Balances

NASA Technical Reports Server (NTRS)

Oglesby, Robert J.; Marshall, Susan; Roads, John O.; Robertson, Franklin R.; Goodman, H. Michael (Technical Monitor)

2001-01-01

We constructed and analyzed wet and dry soil moisture composites for the mid-latitude GCIP region of the central US using long climate model simulations made with the NCAR CCM3 and reanalysis products from NCEP. Using the diagnostic composites as a guide, we have completed a series of predictability experiments in which we imposed soil water initial conditions in CCM3 for the GCIP region for June 1 from anomalously wet and dry years, with atmospheric initial conditions taken from June 1 of a year with 'near-normal' soil water, and initial soil water from the near-normal year and atmospheric initial conditions from the wet and dry years. Preliminary results indicate that the initial state of the atmosphere is more important than the initial state of soil water determining the subsequent late spring and summer evolution of sod water over the GCIP region. Surprisingly, neither the composites or the predictability experiments yielded a strong influence of soil moisture on the atmosphere. To explore this further, we have made runs with extreme dry soil moisture initial anomalies imposed over the GCIP region (the soil close to being completely dry). These runs did yield a very strong effect on the atmosphere that persisted for at least three months. We conclude that the magnitude of the initial soil moisture anomaly is crucial, at least in CCM3, and are currently investigating whether a threshold exists, below which little impact is seen. In a complementary study, we compared the impact of the initial condition of snow cover versus the initial atmospheric state over the western US (corresponding to the westward extension of the GAPP program follow-on to GCIP). In this case, the initial prescription of snow cover is far more important than the initial atmospheric state in determining the subsequent evolution of snow cover. We are currently working to understand the very different soil water and snow cover results.

The combined effects of a long-term experimental drought and an extreme drought on the use of plant-water sources in a Mediterranean forest.

PubMed

Barbeta, Adrià; Mejía-Chang, Monica; Ogaya, Romà; Voltas, Jordi; Dawson, Todd E; Peñuelas, Josep

2015-03-01

Vegetation in water-limited ecosystems relies strongly on access to deep water reserves to withstand dry periods. Most of these ecosystems have shallow soils over deep groundwater reserves. Understanding the functioning and functional plasticity of species-specific root systems and the patterns of or differences in the use of water sources under more frequent or intense droughts is therefore necessary to properly predict the responses of seasonally dry ecosystems to future climate. We used stable isotopes to investigate the seasonal patterns of water uptake by a sclerophyll forest on sloped terrain with shallow soils. We assessed the effect of a long-term experimental drought (12 years) and the added impact of an extreme natural drought that produced widespread tree mortality and crown defoliation. The dominant species, Quercus ilex, Arbutus unedo and Phillyrea latifolia, all have dimorphic root systems enabling them to access different water sources in space and time. The plants extracted water mainly from the soil in the cold and wet seasons but increased their use of groundwater during the summer drought. Interestingly, the plants subjected to the long-term experimental drought shifted water uptake toward deeper (10-35 cm) soil layers during the wet season and reduced groundwater uptake in summer, indicating plasticity in the functional distribution of fine roots that dampened the effect of our experimental drought over the long term. An extreme drought in 2011, however, further reduced the contribution of deep soil layers and groundwater to transpiration, which resulted in greater crown defoliation in the drought-affected plants. This study suggests that extreme droughts aggravate moderate but persistent drier conditions (simulated by our manipulation) and may lead to the depletion of water from groundwater reservoirs and weathered bedrock, threatening the preservation of these Mediterranean ecosystems in their current structures and compositions. © 2014 John Wiley & Sons Ltd.

Observed response of vulnerable forest ecosystems to ongoing site condition changes

NASA Astrophysics Data System (ADS)

Bidló, András; Gulyás, Krisztina; Gálos, Borbála; Horváth, Adrienn

2017-04-01

In the last decades, several symptoms of drought damages have been observed in the Hungarian forests (e.g. sparse canopy, leaf drop, top drying, fungal diseases). Forest responses are also influenced by other factors beyond climate (e.g. available water content, soil conditions, biotic damages, adaptive capacity, etc.). Our aim was to prepare a complex analysis of the change of all site conditions, that could lead to the observed health status decline of the forest tree species. For a case study region in Hungary (Keszthely Mountains, near to Lake Balaton) precipitation and temperature tendencies as well as the frequency of extreme dry summers have been determined for the period 1961-2100. Soil conditions have been investigated in 9 profiles and soil mapping analysis has been carried out including 100 sites with hand soil auger. For the investigation of the water-balance we used the modified Thornthwaite-type monthly model and determined water stress when the relative extractable water (REW) decreased below 40% (Granier et al., 1999). In the last 30 years three severe droughts have been detected when duration of extremely dry and hot periods exceeded 3-4 years. Not only orographic and microclimate conditions but also soil types show a large diversity within a relatively small distance in the case study area. On rendzina with shallow topsoil layer thickness, low water holding capacity, black pine was planted. Brown earth with medium and brown forest soils with deep topsoil layer thickness is favourable for oak (sessile or Turkey) and beech. These microscale differences between the three site condition types resulted different available water contents quantified by the modified Thornthwaite-type monthly water-balance model. Our results show the different sensitivity of the studied sites to water stress. It means that the local scale orographic and soil conditions can enhance the projected drought risk of the region. However, the favourable microclimatic effects of the existing forest stands are still a knowledge gap and the topic of the ongoing research. The research is supported by the "Agroclimate-2" (VKSZ_12-1-2013-0034) joint EU-national research project and by the ÚNKP-16-4-3 New National Excellence Program of the Ministry of Human Capacities. Keywords: climate extremes, changing site conditions, water stress

The Impact of Extreme Weather Events on Dissolved Organic Matter and Microbial Biomass of chernozem soils

NASA Astrophysics Data System (ADS)

Müller, Ann-Christin; Blagodatskaya, Evgenia

2017-04-01

The aim of this experiment was to study the impact of the extreme weather events freezing-thawing and drying-rewetting on C-, N- and P-dynamics in dissolved organic matter and microbial biomass. The three variants of a chernozem soil (Voronezh region, Russia) are (1) fertilized maize cropping, (2) unfertilized maize cropping and (3) a bare fallow. After both abiotic perturbations the respiration rates were generally lower in the freezing-thawing than in the drying-rewetting treatment, due to the lower temperature. The elevated respiration came along with the decay of organic matter, which was also manifested in increased mineralization of C, N and P immediately after rewetting. However, freezing-thawing had significantly less impact on C-, N- and P-mobilization. We conclude that drying-rewetting leads to an initially increased mobilization of C, N and P, which becomes obvious as increased amounts of DOM immediately after rewetting. Freezing-thawing does not affect mobilization in the same way. There, only an increased mobilization of C can be observed. Especially concerning N and P, the reaction is dependent on the form of use/cropping in both treatments.

Characteristics of pristine volcanic materials: Beneficial and harmful effects and their management for restoration of agroecosystem.

PubMed

Anda, Markus; Suparto; Sukarman

2016-02-01

Eruption of Sinabung volcano in Indonesia began again in 2010 after resting for 1200 years. The volcano is daily emitting ash and pyroclastic materials since September 2013 to the present, damaging agroecosystems and costing for management restoration. The objective of the study was to assess properties and impacts of pristine volcanic material depositions on soil properties and to provide management options for restoring the affected agroecosytem. Land satellite imagery was used for field studies to observe the distribution, thickness and properties of ashfall deposition. The pristine ashfall deposits and the underlying soils were sampled for mineralogical, soluble salt, chemical, physical and toxic compound analyses. Results showed that uneven distribution of rainfall at the time of violent eruption caused the areas receiving mud ashfall developed surface encrustation, which was not occur in areas receiving dry ashfall. Ashfall damaged the agroecosytem by burning vegetation, forming surface crusts, and creating soil acidity and toxicity. X-ray diffraction (XRD) and scanning electron microscope (SEM) analyses of encrustated layer indicated the presence of gypsum and jarosite minerals. Gypsum likely acted as a cementing agent in the formation of the encrustation layer with extremely low pH (2.9) and extremely high concentrations of Al, Ca and S. Encrustation is responsible for limited water infiltration and root penetration, while the extremely high concentration of Al is responsible for crop toxicity. Mud ashfall and dry ashfall deposits also greatly changed the underlying soil properties by decreasing soil pH and cation exchange capacity and by increasing exchangeable Ca, Al, and S availability. Despite damaging vegetation in the short-term, the volcanic ashfall enriched the soil in the longer term by adding nutrients like Ca, Mg, K, Na, P, Si and S. Suggested management practices to help restore the agroecosystem after volcanic eruptions include: (i) the application of lime to increase soil pH, increase cation exchange capacity and decrease Al and S toxicities, (ii) the selection of crops which are tolerant to low pH and high concentrations of soluble Al and S, (iii) physically disrupting the hard surface crusts that form on some soils (if <2 cm thick) to allow water infiltration and root penetration, (iv) application of N and K fertilizers, and (v) incorporation of dry ashfall into the soil (if <5 cm thick) to exploit the newly deposited nutrients. Copyright © 2015 Elsevier B.V. All rights reserved.

Diagnosing the Nature of Land-Atmosphere Coupling During the 2006-7 Dry/Wet Extremes in the U. S. Southern Great Plains

NASA Technical Reports Server (NTRS)

Santanello, Joseph A., Jr.; Peters-Lidard, Christa D.; Kumar, Sujay V.; Dong, Xiquan; Kennedy, Aaron D.

2011-01-01

The degree of coupling between the land surface and PBL in NWP models remains largely undiagnosed due to the complex interactions and feedbacks present across a range of scales. In this study, a framework for diagnosing local land-atmosphere coupling (LoCo) is presented using a coupled mesoscale model with observations during the summers of 2006/7 in the U.S. Southern Great Plains. Specifically, the Weather Research and Forecasting (WRF) model has been coupled to NASA's Land Information System (LIS), which enables a suite of PBL and land surface model (LSM) options along provides a flexible and high-resolution representation and initialization of land surface physics and states. This coupling is one component of a larger project to develop a NASA-Unified WRF (NU-WRF) system. A range of diagnostics exploring the feedbacks between soil moisture and precipitation are examined for the dry/wet extremes, along with the sensitivity of PBL-LSM coupling to perturbations in soil moisture.

Phylogeography of microbial phototrophs in the dry valleys of the high Himalayas and Antarctica.

PubMed

Schmidt, S K; Lynch, R C; King, A J; Karki, D; Robeson, M S; Nagy, L; Williams, M W; Mitter, M S; Freeman, K R

2011-03-07

High-elevation valleys in dry areas of the Himalayas are among the most extreme, yet least explored environments on Earth. These barren, rocky valleys are subjected to year-round temperature fluctuations across the freezing point and very low availability of water and nutrients, causing previous workers to hypothesize that no photoautotrophic life (primary producers) exists in these locations. However, there has been no work using modern biogeochemical or culture-independent molecular methods to test the hypothesis that photoautotrophs are absent from high Himalayan soil systems. Here, we show that although microbial biomass levels are as low as those of the Dry Valleys of Antarctica, there are abundant microbial photoautotrophs, displaying unexpected phylogenetic diversity, in barren soils from just below the permanent ice line of the central Himalayas. Furthermore, we discovered that one of the dominant algal clades from the high Himalayas also contains the dominant algae in culture-independent surveys of both soil and ice samples from the Dry Valleys of Antarctica, revealing an unexpected link between these environmentally similar but geographically very distant systems. Phylogenetic and biogeographic analyses demonstrated that although this algal clade is globally distributed to other high-altitude and high-latitude soils, it shows significant genetic isolation by geographical distance patterns, indicating local adaptation and perhaps speciation in each region. Our results are the first to demonstrate the remarkable similarities of microbial life of arid soils of Antarctica and the high Himalayas. Our findings are a starting point for future comparative studies of the dry valleys of the Himalayas and Antarctica that will yield new insights into the cold and dry limits to life on Earth.

Straw Mulching Reduces the Harmful Effects of Extreme Hydrological and Temperature Conditions in Citrus Orchards

PubMed Central

Liu, Yi; Wang, Jing; Liu, Dongbi; Li, Zhiguo; Zhang, Guoshi; Tao, Yong; Xie, Juan; Pan, Junfeng; Chen, Fang

2014-01-01

Extreme weather conditions with negative impacts can strongly affect agricultural production. In the Danjiangkou reservoir area, citrus yields were greatly influenced by cold weather conditions and drought stress in 2011. Soil straw mulching (SM) practices have a major effect on soil water and thermal regimes. A two-year field experiment was conducted to evaluate whether the SM practices can help achieve favorable citrus fruit yields. Results showed that the annual total runoff was significantly (P<0.05) reduced with SM as compared to the control (CK). Correspondingly, mean soil water storage in the top 100 cm of the soil profile was increased in the SM as compared to the CK treatment. However, this result was significant only in the dry season (Jan to Mar), and not in the wet season (Jul to Sep) for both years. Interestingly, the SM treatment did not significantly increase citrus fruit yield in 2010 but did so in 2011, when the citrus crop was completely destroyed (zero fruit yield) in the CK treatment plot due to extremely low temperatures during the citrus overwintering stage. The mulch probably acted as an insulator, resulting in smaller fluctuations in soil temperature in the SM than in the CK treatment. The results suggested that the small effects on soil water and temperature changes created by surface mulch had limited impact on citrus fruit yield in a normal year (e.g., in 2010). However, SM practices can positively impact citrus fruit yield in extreme weather conditions. PMID:24489844

The role of local heating in the 2015 Indian heat wave

USDA-ARS?s Scientific Manuscript database

India faced a major heat wave during the summer of 2015. Temperature anomalies peaked in the dry period before the onset of the summer monsoon, suggesting that local land-atmosphere feedbacks involving desiccated soils and vegetation might have played a role in driving the heat extreme. Upon examina...

Dryland ecosystem responses to precipitation extremes and wildfire at a long-term rainfall manipulation experiment

NASA Astrophysics Data System (ADS)

Brown, R. F.; Collins, S. L.

2017-12-01

Climate is becoming increasingly more variable due to global environmental change, which is evidenced by fewer, but more extreme precipitation events, changes in precipitation seasonality, and longer, higher severity droughts. These changes, combined with a rising incidence of wildfire, have the potential to strongly impact net primary production (NPP) and key biogeochemical cycles, particularly in dryland ecosystems where NPP is sequentially limited by water and nutrient availability. Here we utilize a ten-year dataset from an ongoing long-term field experiment established in 2007 in which we experimentally altered monsoon rainfall variability to examine how our manipulations, along with naturally occurring events, affect NPP and associated biogeochemical cycles in a semi-arid grassland in central New Mexico, USA. Using long-term regional averages, we identified extremely wet monsoon years (242.8 mm, 2013), and extremely dry monsoon years (86.0 mm, 2011; 80.0 mm, 2015) and water years (117.0 mm, 2011). We examined how changes in precipitation variability and extreme events affected ecosystem processes and function particularly in the context of ecosystem recovery following a 2009 wildfire. Response variables included above- and below-ground plant biomass (ANPP & BNPP) and abundance, soil nitrogen availability, and soil CO2 efflux. Mean ANPP ranged from 3.6 g m-2 in 2011 to 254.5 g m-2 in 2013, while BNPP ranged from 23.5 g m-2 in 2015 to 194.2 g m-2 in 2013, demonstrating NPP in our semi-arid grassland is directly linked to extremes in both seasonal and annual precipitation. We also show increased nitrogen deposition positively affects NPP in unburned grassland, but has no significant impact on NPP post-fire except during extremely wet monsoon years. While soil respiration rates reflect lower ANPP post-fire, patterns in CO2 efflux have not been shown to change significantly in that efflux is greatest following large precipitation events preceded by longer drying periods. Current land surface models poorly represent dryland ecosystems, which frequently undergo extreme weather events. Our long-term experiment provides key insights into ecosystem processes and function, thereby providing capacity for model improvement particularly in the context of future environmental change.

Protein Oxidation: Key to Bacterial Desiccation Resistance?

DOE Office of Scientific and Technical Information (OSTI.GOV)

Fredrickson, Jim K.; Li, Shu-Mei W.; Gaidamakova, E.

For extremely ionizing radiation resistant bacteria, survival has been attributed to protection of proteins from oxidative damage during irradiation, with the result that repair systems survive and function with far greater efficiency during recovery than in sensitive bacteria. Here we examined the relationship between survival of dry-climate soil bacteria and the level of cellular protein oxidation induced by desiccation. Bacteria were isolated from surface soils of the shrub-steppe of the U.S. Department of Energy’s Hanford Site in Washington state. A total of 63 isolates were used for phylogenetic analysis. The majority of isolates were closely related to members of themore » genus Deinococcus, with Chelatococcus, Methylobacterium and Bosea also among the genera identified. Desiccation-resistant isolates accumulated high intracellular manganese and low iron concentrations compared to sensitive bacteria. In vivo, proteins of desiccation-resistant bacteria were protected from oxidative modifications that introduce carbonyl groups in sensitive bacteria during drying. We present the case that survival of bacteria that inhabit dry-climate soils are highly dependent on mechanisms which limit protein oxidation during dehydration.« less

Contrasting environmental memories by ancient soils on different parent rocks in the South-western Italian Alps

NASA Astrophysics Data System (ADS)

D'Amico, Michele; Catoni, Marcella; Bonifacio, Eleonora; Zanini, Ermanno

2014-05-01

Ancient soils (pre-Holocenic paleosols and vetusols) are uncommon on the Alps, because of the extensive Pleistocenic glaciations which erased most of the previously existing soils, the slope steepness and climatic conditions favoring soil erosion. However, in few sites, particularly in the outermost sections of the Alpine range, Pleistocene glaciers covered only small and scattered surfaces because of the low altitude reached in the basins, and ancient soils could be preserved for long periods of time on particularly stable surfaces. We described and sampled soils on 11 stable surfaces in the Upper Tanaro valley, Ligurian Alps (Southwestern Piemonte, Italy). The sampling sites were characterized by low steepness and elevation between 600 to 1600 m, under present day lower montane Castanea sativa/Ostrya carpinifolia forests, montane Fagus sylvatica and Pinus uncinata forests or montane heath/grazed grassland, on different substrata. In particular, we sampled soils developed on dolomite, limestone, quartzite, gneiss and shales. The soils were always well representative of the pedogenic trends active on the respective parent materials, i.e. the skeletal fraction in each soil was always composed of just one rock type, despite the proximity of lithological boundaries and the small dimensions of the different outcrops, often coexisting on the same stable surface. All the considered profiles showed signs of extremely long pedogenesis and/or different phases of intense pedogenesis interrupted by the deposition of periglacial cover beds in the steepest sites. Up to four phases of intense pedogenesis were recognized where cover beds were developed, presumably during cold Pleistocene phases, as present-day climate is not cold enough to create such periglacial morphologies. In such cases, each cover bed underwent similar pedogenesis, strongly dependent on the parent material: on quartzite, podzols with thick E horizons and well developed placic ones were formed in all phases except the most superficial one (i.e., Holocene phase), where non cemented spodic horizons or weakly cemented ortstein were formed; placic horizons were never found in Holocene soils. On limestone, each cover bed separated soils with extremely hard petrocalcic horizons overlaid by argillic ones. Where no cover beds were observed, podzols with extremely thick E horizons (up to more than 2 m thick) and a very hard, very thick ortstein were formed on quartzite. Red Nitisols-like or reddish brown Luvisols were formed on limestone and dolomite, while red, extremely acidic Alisols, with or without fragipan horizons were formed on shales. Very large stone circles and other large patterned ground features, which can be interpreted as evidence of past permafrost conditions, were preserved on coarse quartzitic conglomerate. These soils represent excellent pedo-signatures of different specific past climatic or environmental conditions, as a response of different lithologies to specific soil-forming environments, which range from warm and humid climates typical of red Luvisols and Nitisols, to cool and wet climates leading to the formation of Podzols with placic or ortstein horizons, to extremely cold and dry ones characterizing permafrost sites and often associated with fragipan formation, to warm and dry leading to the cementation of petrocalcic horizons. The precise dating and interpretation of these soils are intriguing.

Modulation of SSM/I microwave soil radiances by rainfall

NASA Technical Reports Server (NTRS)

Heymsfield, Gerald M.; Fulton, Richard

1992-01-01

The feasibility of using SSM/I satellite data for estimating the soil moisture content was investigated by correlating the rainfall and soil moisture data with values of the SSM/I microwave brightness temperature obtained for the lower Great Plains in the United States during 1987. It was found that the areas of lowest brightness temperatures coincided with regions of bare soil which had received significant rainfall. The time-history plots of the brightness temperature and the antecedent precipitation index during an extremely large rain event indicated a slow recovery period (about 15 days) back to the dry soil state. However, regions covered with vegetation showed smaller temperature drops and much weaker correlation with rain events, questioning the feasibility of using SSM/I measurements for estimations of soil moisture in regions containing vegetation-covered soil.

Oak Forest Responses to Episodic-Seasonal-Drought, Chronic Multi-year Precipitation Change and Acute Drought Manipulations in a Region With Deep Soils and High Precipitation

NASA Astrophysics Data System (ADS)

Hanson, Paul J.; Wullschleger, Stan D.; Todd, Donald E.; Auge, Robert M.; Froberg, Mats; Johnson, Dale W.

2010-05-01

Implications of episodic-seasonal drought (extremely dry late summers), chronic multi-year precipitation manipulations (±33 percent over 12 years) and acute drought (-100 percent over 3 years) were evaluated for the response of vegetation and biogeochemical cycles for an upland-oak forest. The Quercus-Acer forest is located in eastern Tennessee on deep acidic soils with mean annual temperatures of 14.2 °C and abundant precipitation (1352 mm y-1). The multi-year observations and chronic manipulations were conducted from 1993 through 2005 using understory throughfall collection troughs and redistribution gutters and pipes. Acute manipulations of dominant canopy trees (Quercus prinus; Liriodendron tulipifera) were conducted from 2003 through 2005 using full understory tents. Regional and severe late-summer droughts were produced reduced stand water use and photosynthetic carbon gain as expected. Likewise, seedlings and saplings exhibited reduced survival and cumulative growth reductions. Conversely, multi-year chronic increases or decreases in precipitation and associated soil water deficits did not reduce large tree basal area growth for the tree species present. The resilience of canopy trees to chronic-change was the result of a disconnect between carbon allocation to tree growth (an early-season phenomenon) and late-season drought occurrence. Acute precipitation exclusion from the largest canopy trees also produced limited physiological responses and minimal cumulative growth reductions. Lateral root water sources were removed through trenching and could not explain the lack of response to extreme soil drying. Therefore, deep rooting the primary mechanism for large-tree resilience to severe drought. Extensive trench-based assessments of rooting depth suggested that ‘deep' water supplies were being obtained from limited numbers of deep fine roots. Observations of carbon stocks in organic horizons demonstrated accumulation with precipitation reductions and drying, but no change in mineral soil carbon pools attributable to changing precipitation. Measured changes in nitrogen and other element pools suggested that long term immobilization of elements with chronic drying would lead to reduced growth, but that deep rooting access to the key base cations would moderate such effects by providing a source of minerals to be cycled in near surface soils. Cumulative changes in canopy foliar production were evident over time showing sustained or even increased production with chronic drying. This unexpected response is hypothesized to result from the retention of nutrients in highly-rooted surface horizons made available for plant uptake during spring mineralization.

Zeolite Formation and Weathering Processes in Dry Valleys of Antartica: Martian Analogs

NASA Technical Reports Server (NTRS)

Gibson, E. K., Jr.; Wentworth, S. J.; McKay, D. S.; Socki, R. A.

2004-01-01

Terrestrial weathering processes in cold-desert climates such as the Dry Valleys of Antarctica may provide an excellent analog to chemical weathering and diagenesis of soils on Mars. Detailed studies of soil development and the chemical and mineralogical alterations occurring within soil columns in Wright Valley, Antarctica show incredible complexity in the upper meter of soil. Previous workers noted the ice-free Dry Valleys are the best terrestrial approximations to contemporary Mars. Images returned from the Pathfinder and Spirit landers show similarities to surfaces observed within the Dry Valleys. Similarities to Mars that exist in these valleys are: mean temperatures always below freezing (-20 C), no rainfall, sparse snowfall-rapidly removed by sublimation, desiccating winds, diurnal freeze-thaw cycles (even during daylight hours), low humidity, oxidative environment, relatively high solar radiation and low magnetic fields . The Dry Valley soils contain irregular distributions and low abundances of soil microorganisms that are somewhat unusual on Earth. Physical processes-such as sand abrasion-are dominant mechanisms of rock weathering in Antarctica. However, chemical weathering is also an important process even in such extreme climates. For example, ionic migration occurs even in frozen soils along liquid films on individual soil particles. It has also been shown that water with liquid-like properties is present in soils at temperatures on the order of approx.-80 C and it has been observed that the percentage of oxidized iron increases with increasing soil age and enrichments in oxidized iron occurs toward the surface. The presence of evaporates is evident and appear similar to "evaporite sites" within the Pathfinder and Spirit sites. Evaporites indicate ionic migration and chemical activity even in the permanently frozen zone. The presence of evaporates indicates that chemical weathering of rocks and possibly soils has been active. Authogenic zeolites have been identified within the soil columns because they are fragile; i.e. they are euhedral, unabraded, and unfractured, strongly suggesting in situ formation. Their presence in Antarctic samples is another indication that diagenic processes are active in cold-desert environments. The presence of zeolites, and other clays along with halites, sulfates, carbonates, and hydrates are to be expected within the soil columns on Mars at the Gusev and Isidis Planitia regions. The presence of such water-bearing minerals beneath the surface supplies one of the requirements to support biological activity on Mars.

Investigating the Impacts of Particle Size and Wind Speed on Brownout

DTIC Science & Technology

2015-03-26

mixture of sand, silt, clay , and organic material, classified based on its size and texture. Sand is the largest of the particle materials, with...smallest soil component is clay , with particle sizes less than 0.002 mm. Ultra-fine in texture, clay feels sticky when wet, is extremely cohesive, and does...not allow air to move through it easily. Clay makes a soil dense and is hard as concrete when dry. Loam is a nearly even mixture of sand and silt

Extreme Maximum Land Surface Temperatures.

NASA Astrophysics Data System (ADS)

Garratt, J. R.

1992-09-01

There are numerous reports in the literature of observations of land surface temperatures. Some of these, almost all made in situ, reveal maximum values in the 50°-70°C range, with a few, made in desert regions, near 80°C. Consideration of a simplified form of the surface energy balance equation, utilizing likely upper values of absorbed shortwave flux (1000 W m2) and screen air temperature (55°C), that surface temperatures in the vicinity of 90°-100°C may occur for dry, darkish soils of low thermal conductivity (0.1-0.2 W m1 K1). Numerical simulations confirm this and suggest that temperature gradients in the first few centimeters of soil may reach 0.5°-1°C mm1 under these extreme conditions. The study bears upon the intrinsic interest of identifying extreme maximum temperatures and yields interesting information regarding the comfort zone of animals (including man).

The impact of extreme environmental factors on the mineralization potential of the soil

NASA Astrophysics Data System (ADS)

Zinyakova, Natalia; Semenov, Vyacheslav

2016-04-01

Warming, drying, wetting are the prevalent disturbing natural impacts that affect the upper layers of uncultivated and arable soils. The effect of drying-wetting cycles act as a physiological stress for the soil microbial community and cause changes in its structure, the partial death or lysis of the microbial biomass. The mobilization of the SOM and the stabilization of the potentially mineralizable components lead to change of mineralization potential in the soil. To test the effects of different moisture regime on plant growth and soil biological properties, plot experiment with the gray forest soil including trials with plants (corn) and bare fallow was performed. Different regimes of soil moisture (conditionally optimal, relatively deficient soil moisture and repeated cycles of drying-wetting) were created. Control of soil moisture was taken every two or three days. Gas sampling was carried out using closed chambers. Soil samples were collected at the end of the pot experiment. The potentially mineralizable content of soil organic carbon (SOC) was measured by biokinetic method based on (1) aerobic incubation of soil samples under constant temperature and moisture conditions during 158 days, (2) quantitation of C-CO2, and (3) fitting of C-CO2 cumulative curve by a model of first-order kinetic. Total soil organic carbon was measured by Tyrin's wet chemical oxidation method. Permanent deficient moisture in the soil favored the preservation of potentially mineralizable SOC. Two repeated cycles of drying-wetting did not reduce the potentially mineralizable carbon content in comparison with control under optimal soil moisture during 90 days of experiment. The emission loss of C-CO2 from the soil with plants was 1.4-1.7 times higher than the decrease of potentially mineralizable SOC due to the contribution of root respiration. On the contrary, the decrease of potentially mineralized SOC in the soil without plants was 1.1-1.2 times larger than C-CO2 emissions from the soil as a result of stabilization processes. Thus, the alternation of drying-wetting cycles results in 1) the death of microbial biomass and recolonization of the soil microorganisms; 2) favors the splitting and degradation of soil aggregates, as well as the reaggregation and stabilization of aggregates; 3) contributes to the mobilization of the SOM and also 4) initiates the stabilization of the potentially mineralizable components. The effect of drying-wetting cycles is expressed not so much in the loss of the total soil organic carbon as in the degradation of the SOM quality with decreasing its mineralization potential. We can conclude that different soil moisture regimes lead to essential changes of mineralization potential in the gray forest soil. The amount of mineralization loss soil carbon via C-CO2 emission is directly associated with the decrease of potentially mineralizable carbon. Deficient moisture is a reason for temporarily sequestration of SOC potentially mineralizable under optimal moisture. This work was supported by RSF. Project number 14-14-00625

Cocoa agroforestry is less resilient to sub-optimal and extreme climate than cocoa in full sun.

PubMed

Abdulai, Issaka; Vaast, Philippe; Hoffmann, Munir P; Asare, Richard; Jassogne, Laurence; Van Asten, Piet; Rötter, Reimund P; Graefe, Sophie

2018-01-01

Cocoa agroforestry is perceived as potential adaptation strategy to sub-optimal or adverse environmental conditions such as drought. We tested this strategy over wet, dry and extremely dry periods comparing cocoa in full sun with agroforestry systems: shaded by (i) a leguminous tree species, Albizia ferruginea and (ii) Antiaris toxicaria, the most common shade tree species in the region. We monitored micro-climate, sap flux density, throughfall, and soil water content from November 2014 to March 2016 at the forest-savannah transition zone of Ghana with climate and drought events during the study period serving as proxy for projected future climatic conditions in marginal cocoa cultivation areas of West Africa. Combined transpiration of cocoa and shade trees was significantly higher than cocoa in full sun during wet and dry periods. During wet period, transpiration rate of cocoa plants shaded by A. ferruginea was significantly lower than cocoa under A. toxicaria and full sun. During the extreme drought of 2015/16, all cocoa plants under A. ferruginea died. Cocoa plants under A. toxicaria suffered 77% mortality and massive stress with significantly reduced sap flux density of 115 g cm -2  day -1 , whereas cocoa in full sun maintained higher sap flux density of 170 g cm -2  day -1 . Moreover, cocoa sap flux recovery after the extreme drought was significantly higher in full sun (163 g cm -2  day -1 ) than under A. toxicaria (37 g cm -2  day -1 ). Soil water content in full sun was higher than in shaded systems suggesting that cocoa mortality in the shaded systems was linked to strong competition for soil water. The present results have major implications for cocoa cultivation under climate change. Promoting shade cocoa agroforestry as drought resilient system especially under climate change needs to be carefully reconsidered as shade tree species such as the recommended leguminous A. ferruginea constitute major risk to cocoa functioning under extended severe drought. © 2017 John Wiley & Sons Ltd.

Analysing the mechanisms of soil water and vapour transport in the desert vadose zone of the extremely arid region of northern China

NASA Astrophysics Data System (ADS)

Du, Chaoyang; Yu, Jingjie; Wang, Ping; Zhang, Yichi

2018-03-01

The transport of water and vapour in the desert vadose zone plays a critical role in the overall water and energy balances of near-surface environments in arid regions. However, field measurements in extremely dry environments face many difficulties and challenges, so few studies have examined water and vapour transport processes in the desert vadose zone. The main objective of this study is to analyse the mechanisms of soil water and vapour transport in the desert vadose zone (depth of ∼350 cm) by using measured and modelled data in an extremely arid environment. The field experiments are implemented in an area of the Gobi desert in northwestern China to measure the soil properties, daily soil moisture and temperature, daily water-table depth and temperature, and daily meteorological records from DOYs (Days of Year) 114-212 in 2014 (growing season). The Hydrus-1D model, which simulates the coupled transport of water, vapour and heat in the vadose zone, is employed to simulate the layered soil moisture and temperature regimes and analyse the transport processes of soil water and vapour. The measured results show that the soil water and temperatures near the land surface have visible daily fluctuations across the entire soil profile. Thermal vapour movement is the most important component of the total water flux and the soil temperature gradient is the major driving factor that affects vapour transport in the desert vadose zone. The most active water and heat exchange occurs in the upper soil layer (depths of 0-25 cm). The matric potential change from the precipitation mainly re-draws the spatio-temporal distribution of the isothermal liquid water in the soil near the land surface. The matric potential has little effect on the isothermal vapour and thermal liquid water flux. These findings offer new insights into the liquid water and vapour movement processes in the extremely arid environment.

Pore-Scale Effects of Soil Structure And Microbial EPS Production On Soil Water Retention

NASA Astrophysics Data System (ADS)

Orner, E.; Anderson, E.; Rubinstein, R. L.; Chau, J. F.; Shor, L. M.; Gage, D. J.

2013-12-01

Climate-induced changes to the hydrological cycle will increase the frequency of extreme weather events including powerful storms and prolonged droughts. Moving forward, one of the major factors limiting primary productivity in terrestrial ecosystems will be sub-optimal soil moisture. We focus here on the ability of soils to retain moisture under drying conditions. A soil's ability to retain moisture is influenced by many factors including its texture, its structure, and the activities of soil microbes. In soil microcosms, the addition of small amounts of microbially-produced extracellular polymeric substances (EPS) can dramatically shift moisture retention curves. The objective of this research is to better understand how soil structure and EPS may act together to retain moisture in unsaturated soils. Replicate micromodels with exactly-conserved 2-D physical geometry were initially filled with aqueous suspensions of one of two types of bacteria: one mutant was ultra- muccoid and the other was non-muccoid. Replicate micromodels were held at a fixed, external, relative humidity, and the position of the air-water interface was imaged over time as water evaporates. There was no forced convection of air or water inside the micromodels: drying was achieved by water evaporation and diffusion alone. We used a fully automated, inverted microscope to image replicate drying lanes each with dimensions of 1 mm x 10 mm. A complete set of images was collected every 30 minutes for 30 hours. The results show devices loaded with the highly muccoid strain remained >40% hydrated for 13 h, while devices loaded with the non-muccoid remained >40% hydrated for only 6 h, and were completely dry by 13 h. Current work is comparing interfacial water fluxes in structured and unstructured settings, and is attempting to model the synergistic effects of soil structure and EPS content on moisture retention in real soils. This research may allow more accurate description of naturally-occurring feedbacks between the soil carbon and water cycles, and may enable agriculture biotechnology that enhances natural soil processes for improved resiliency of terrestrial ecosystems.

[Characteristics of floor litter and soil arthropod community in different types ot subtropical forest in Ailao Mountain of Yunnan, Southwest China].

PubMed

Yang, Zhao; Yang, Xiao-Dong

2011-11-01

By using line transect method, an investigation was conducted on the floor litter and soil arthropod community in a mid mountain wet evergreen broad-leaved forest, a mossy dwarf forest, and a Populus bonatii forest in Ailao Mountain of Yunnan in April (dry and hot season), June (rainy season), and December (dry and cold season), 2005. In both dry and rainy seasons, the existing floor litter mass, C storage, and C/N ratio in the three forests all increased in the order of mossy dwarf forest > P. bonatii forest > evergreen broad-leaved forest, but the N storage had less difference. In the floor litter layer of the forests, Acari and Collembola were the dominant groups of soil arthropod community, while Diptera larvae, Coleoptera, ants, and Homoptera were the common groups. The Sorenson coefficients of soil arthropod community in the three forests were extremely great. No significant differences were observed in the soil arthropod density (ind x m(-2)) in the floor litter layer among the three forests, but the relative density (ind x g(-1)) of soil arthropods was higher in the evergreen broad-leaved forest and P. bonatii forest than in the mossy dwarf forest. In the three forests, the density of soil arthropods was significantly higher in dry season than in rainy season, but the Shannon diversity index had less difference. There were significant positive correlations between the existing floor litter mass and the individual density (ind x m(-2)) and dominant groups of soil arthropod communities in dry and hot season (April), but negative correlations between the existing floor litter mass and the relative density (ind x g(-1)) of soil arthropod communities and Acari in dry and cold season (December). The individual densities of Collembola and Coleoptera also had positive correlations with the N storage of the existing floor litter mass in the three forests. It was considered that the floor litter and the development of soil arthropod community in the litter layer of the subtropical forests in Ailao Mountain had a close relation with the vegetation structure of the forests, and the individual density and the diversity of the soil arthropod community were controlled by the floor litter, whereas the environmental factors such as temperature and moisture in the forests also had obvious effects on the seasonal dynamics of the individual density of the soil arthropods.

Sporulation and Germination patterns - hedging a bet on long term microbial survivability in dry soil

NASA Astrophysics Data System (ADS)

Claes, N.; Or, D.

2012-04-01

Soil hosts unparalleled diversity of microbial life that is constantly challenged by the vagaries of fluctuating ambient conditions. Desiccation stresses play a key role not only by directly affecting individual bacterial cells, but also by shaping diffusion pathways and cell dispersion. The gradual thinning and fragmentation of the aqueous environment during drying have led to different survival mechanisms including dormancy and sporulation, resulting in a highly resistive state capable of surviving extreme and prolonged environmental stresses until conditions improve in the future. Our aim is to investigate how temporal changes in hydration status shape microbial communities over time, based on simple survival strategy rules for each individual bacterium. The two survival strategies considered are dormancy and sporulation. Dormancy is the state in which bacterial cells significantly reduce their metabolism with minor morphological adaptations. The required energy and time for attaining this state are low relative to sporulation costs. Sporulation involves several morphological and biochemical changes that result in a resistive capsule that endures extreme stresses over long periods of time. The working hypothesis is that different micro-ecological conditions and community compositions would result from temporal patterns and magnitude of desiccation stresses. An Individual Based Model (IBM) considering habitats on rough soil surfaces and local effects of micro-hydrological conditions on dispersion and nutrient diffusion would enable systematic study of emerging communities over extended periods. Different population compositions are expected to emerge based on low and high frequency, duration and amplitudes of wetting-drying cycles reflecting relative success or failure of survival strategy.

Diagnosing Warm Season Precipitation Over the GCIP Region from a GCM and Reanalysis

NASA Technical Reports Server (NTRS)

Oglesby, Robert; Marshall, Susan; Roads, John; Robertson, Franklin R.

2000-01-01

A 45 year simulation using a global general circulation model (GCM), the National Center for Atmospheric Research (NCAR) Community Climate Model v.3 (CCM3), forced with observed sea surface temperatures (SST), and 39 years of global National Centers for Environmental Prediction (NCEP) reanalyses were analyzed to determine Mississippi River basin warm season (May, June, July or MJJ) wet and dry year composites in the water and energy budgets. Years that have increased MJJ soil moisture over the GEWEX (Global Water and Energy Experiment) Continental Interior Project (GCIP) region also have high precipitation, lower surface temperature, decreased Bowen ratio, and reduced 500 hPa geopotential height (essentially reduced MJJ ridging). The reverse is true for years that have reduced MJJ soil moisture. Wet years are also accompanied by a general increase in moisture transport from the Gulf of Mexico into the central U.S. There is some indication (though weaker) that soil moisture may then affect precipitation and other quantities and be affected in turn by 500 hPa geopotential heights. The correlations are somewhat low, however, demonstrating the difficulty in providing definitive physical links between the remote and local effects. Analysis of two individual years with an extreme wet event (1993) and an extreme dry event (1988) yields the same general relationships as with the wet and dry composites. The composites from this study are currently serving as the basis for a series of experiments aimed at determining the predictability of the land surface and remote SST on the Mississippi River basin and other large-scale river basins.

Using dry spell dynamics of land surface temperature to evaluate large-scale model representation of soil moisture control on evapotranspiration

NASA Astrophysics Data System (ADS)

Taylor, Christopher M.; Harris, Philip P.; Gallego-Elvira, Belen; Folwell, Sonja S.

2017-04-01

The soil moisture control on the partition of land surface fluxes between sensible and latent heat is a key aspect of land surface models used within numerical weather prediction and climate models. As soils dry out, evapotranspiration (ET) decreases, and the excess energy is used to warm the atmosphere. Poor simulations of this dynamic process can affect predictions of mean, and in particular, extreme air temperatures, and can introduce substantial biases into projections of climate change at regional scales. The lack of reliable observations of fluxes and root zone soil moisture at spatial scales that atmospheric models use (typically from 1 to several hundred kilometres), coupled with spatial variability in vegetation and soil properties, makes it difficult to evaluate the flux partitioning at the model grid box scale. To overcome this problem, we have developed techniques to use Land Surface Temperature (LST) to evaluate models. As soils dry out, LST rises, so it can be used under certain circumstances as a proxy for the partition between sensible and latent heat. Moreover, long time series of reliable LST observations under clear skies are available globally at resolutions of the order of 1km. Models can exhibit large biases in seasonal mean LST for various reasons, including poor description of aerodynamic coupling, uncertainties in vegetation mapping, and errors in down-welling radiation. Rather than compare long-term average LST values with models, we focus on the dynamics of LST during dry spells, when negligible rain falls, and the soil moisture store is drying out. The rate of warming of the land surface, or, more precisely, its warming rate relative to the atmosphere, emphasises the impact of changes in soil moisture control on the surface energy balance. Here we show the application of this approach to model evaluation, with examples at continental and global scales. We can compare the behaviour of both fully-coupled land-atmosphere models, and land surface models forced by observed meteorology. This approach provides insight into a fundamental process that affects predictions on multiple time scales, and which has an important impact for society.

InSAR constraints on soil moisture evolution after the March 2015 extreme precipitation event in Chile.

PubMed

Scott, C P; Lohman, R B; Jordan, T E

2017-07-07

Constraints on soil moisture can guide agricultural practices, act as input into weather, flooding and climate models and inform water resource policies. Space-based interferometric synthetic aperture radar (InSAR) observations provide near-global coverage, even in the presence of clouds, of proxies for soil moisture derived from the amplitude and phase content of radar imagery. We describe results from a 1.5 year-long InSAR time series spanning the March, 2015 extreme precipitation event in the hyperarid Atacama desert of Chile, constraining the immediate increase in soil moisture and drying out over the following months, as well as the response to a later, smaller precipitation event. The inferred temporal evolution of soil moisture is remarkably consistent between independent, overlapping SAR tracks covering a region ~100 km in extent. The unusually large rain event, combined with the extensive spatial and temporal coverage of the SAR dataset, present an unprecedented opportunity to image the time-evolution of soil characteristics over different surface types. Constraints on the timescale of shallow water storage after precipitation events are increasingly valuable as global water resources continue to be stretched to their limits and communities continue to develop in flood-prone areas.

Climate variability and extremes, interacting with nitrogen storage, amplify eutrophication risk

USGS Publications Warehouse

Lee, Minjin; Shevliakova, Elena; Malyshev, Sergey; Milly, P.C.D.; Jaffe, Peter R.

2016-01-01

Despite 30 years of basin-wide nutrient-reduction efforts, severe hypoxia continues to be observed in the Chesapeake Bay. Here we demonstrate the critical influence of climate variability, interacting with accumulated nitrogen (N) over multidecades, on Susquehanna River dissolved nitrogen (DN) loads, known precursors of the hypoxia in the Bay. We used the process model LM3-TAN (Terrestrial and Aquatic Nitrogen), which is capable of capturing both seasonal and decadal-to-century changes in vegetation-soil-river N storage, and produced nine scenarios of DN-load distributions under different short-term scenarios of climate variability and extremes. We illustrate that after 1 to 3 yearlong dry spells, the likelihood of exceeding a threshold DN load (56 kt yr−1) increases by 40 to 65% due to flushing of N accumulated throughout the dry spells and altered microbial processes. Our analyses suggest that possible future increases in climate variability/extremes—specifically, high precipitation occurring after multiyear dry spells—could likely lead to high DN-load anomalies and hypoxia.

Utility of remote sensing-based surface energy balance models to track water stress in rain-fed switchgrass under dry and wet conditions

NASA Astrophysics Data System (ADS)

Bhattarai, Nishan; Wagle, Pradeep; Gowda, Prasanna H.; Kakani, Vijaya G.

2017-11-01

The ability of remote sensing-based surface energy balance (SEB) models to track water stress in rain-fed switchgrass (Panicum virgatum L.) has not been explored yet. In this paper, the theoretical framework of crop water stress index (CWSI; 0 = extremely wet or no water stress condition and 1 = extremely dry or no transpiration) was utilized to estimate CWSI in rain-fed switchgrass using Landsat-derived evapotranspiration (ET) from five remote sensing based single-source SEB models, namely Surface Energy Balance Algorithm for Land (SEBAL), Mapping ET with Internalized Calibration (METRIC), Surface Energy Balance System (SEBS), Simplified Surface Energy Balance Index (S-SEBI), and Operational Simplified Surface Energy Balance (SSEBop). CWSI estimates from the five SEB models and a simple regression model that used normalized difference vegetation index (NDVI), near-surface temperature difference, and measured soil moisture (SM) as covariates were compared with those derived from eddy covariance measured ET (CWSIEC) for the 32 Landsat image acquisition dates during the 2011 (dry) and 2013 (wet) growing seasons. Results indicate that most SEB models can predict CWSI reasonably well. For example, the root mean square error (RMSE) ranged from 0.14 (SEBAL) to 0.29 (SSEBop) and the coefficient of determination (R2) ranged from 0.25 (SSEBop) to 0.72 (SEBAL), justifying the added complexity in CWSI modeling as compared to results from the simple regression model (R2 = 0.55, RMSE = 0.16). All SEB models underestimated CWSI in the dry year but the estimates from SEBAL and S-SEBI were within 7% of the mean CWSIEC and explained over 60% of variations in CWSIEC. In the wet year, S-SEBI mostly overestimated CWSI (around 28%), while estimates from METRIC, SEBAL, SEBS, and SSEBop were within 8% of the mean CWSIEC. Overall, SEBAL was the most robust model under all conditions followed by METRIC, whose performance was slightly worse and better than SEBAL in dry and wet years, respectively. Underestimation of CWSI under extremely dry soil conditions and the substantial role of SM in the regression model suggest that integration of SM in SEB models could improve their performances under dry conditions. These insights will provide useful guidance on the broader applicability of SEB models for mapping water stresses in switchgrass under varying geographical and meteorological conditions.

Impacts of climate variability and extreme events on soil hydrological processes

NASA Astrophysics Data System (ADS)

Ramos, M. C.; Mulligan, M.

2003-04-01

The Mediterranean climate (dry subhumid), characterised by a high variability, produces in many situations an insufficient water supply to support stable agriculture. Not only is there insufficient rainfall, but its occurrence is also highly variable between years, during the year, and spatially, during a single rainfall event. One of the main climatic characteristics affecting the vulnerability of the Mediterranean region is the high intensity rainfalls which fall after a very dry summer and the high degree of climatic fluctuation in the short and long term, especially in rainfall quantity. In addition, the rainwater penetration and storage of water in the soil are conditioned by the soil characteristics, in some cases modified by changes in land use and with new management practices. The aim of this study was to evaluate the impact of this high variability, from year to year and through the year, on soil hydrological processes, in fields resulted of the mechanisation works in vineyards in a Mediterranean environment. The PATTERNlight model, a simplified two-dimensional version of the hydrological and growth PATTERN model (Mulligan, 1996) is used here to simulate the water balance for three situations: normal, wet and dry years. Ssignificant differences in soil moisture and recharge were observed under vine culture from year to year, giving rise very often, to critical situations for the development of the crops. The distribution of the rainfall through the year together with the intensity of the recorded rainfalls is much very significant for soil hydrology than the total annual rainfall. Very low soil moisture conditions are raised when spring rainfall is scarce, which contribute to exhaustion of profile soil water over the summer, especially if the antecedent soil moisture is low. This low soil moisture has a significant effect on the development of the vine crop. The simulations of leaf and root biomass carried out with the PATTERNLIGHT model indicate the differences in the development of the leaf biomass between wet and dry conditions, especially with dry springs. Wet conditions favour the development of root and leaf biomass in a significant way. Mulligan, M., 1996. Modelling the hydrology of vegetation competition in a degrade semiarid environment. PhD Theses. Department of Geography, King's College London, University of London.

About climate variabilitiy leading the hydric condition of the soil in the rainfed region of Argentina

NASA Astrophysics Data System (ADS)

Pántano, V. C.; Penalba, O. C.

2013-05-01

Extreme events of temperature and rainfall have a socio-economic impact in the rainfed agriculture production region in Argentina. The magnitude of the impact can be analyzed through the water balance which integrates the characteristics of the soil and climate conditions. Changes observed in climate variables during the last decades affected the components of the water balance. As a result, a displacement of the agriculture border towards the west was produced, improving the agricultural production of the region. The objective of this work is to analyze how the variability of rainfall and temperature leads the hydric condition of the soil, with special focus on extreme events. The hydric conditions of the soil (HC= Excess- Deficit) were estimated from the monthly water balance (Thornthwaite and Mather method, 1957), using monthly potential evapotranspiration (PET) and monthly accumulated rainfall (R) for 33 stations (period 1970-2006). Information of temperature and rainfall was provided by National Weather Service and the effective capacity of soil water was considered from Forte Lay and Spescha (2001). An agricultural extreme condition occurs when soil moisture and rainfall are inadequate or excessive for the development of the crops. In this study, we define an extreme event when the variable is less (greater) than its 20% and 10% (80% and 90%) percentile. In order to evaluate how sensitive is the HC to water and heat stress in the region, different conditional probabilities were evaluated. There is a weaker response of HC to extreme low PET while extreme low R leads high values of HC. However, this behavior is not always observed, especially in the western region where extreme high and low PET show a stronger influence over the HC. Finally, to analyze the temporal variability of extreme PET and R, leading hydric condition of the soil, the number of stations presenting extreme conditions was computed for each month. As an example, interesting results were observed for April. During this month, the water recharge of the soil is crucial to let the winter crops manage with the scarce rainfalls occurring in the following months. In 1970, 1974, 1977, 1978 and 1997 more than 50% of the stations were under extreme high PET; while 1970, 1974, 1978 and 1988 presented more than 40% under extreme low R. Thus, the 70s was the more threatened decade of the period. Since the 80s (except for 1997), extreme dry events due to one variable or the other are mostly presented separately, over smaller areas. The response of the spatial distribution of HC is stronger when both variables present extreme conditions. In particular, during 1997 the region presents extreme low values of HC as a consequence of extreme low R and high PET. Communities dependent on agriculture are highly sensitive to climate variability and its extremes. In the studied region, it was shown that scarce water and heat stress contribute to the resulting hydric condition, producing strong impact over different productive activities. Extreme temperature seems to have a stronger influence over extreme unfavorable hydric conditions.

Impact of the extreme 2009 wildfire Victoria the wettability of naturally highly water repellent soils

NASA Astrophysics Data System (ADS)

Doerr, Stefan H.; Shakesby, Richard A.; Sheridan, Gary J.; Lane, Patrick Nj; Smith, Hugh G.; Bell, Tina; Blake, William H.

2010-05-01

The recent catastrophic wildfires near Melbourne, which peaked on Feb. 7 2009, burned ca 400,000 ha and caused the tragic loss of 173 people. They occurred during unprecedented extreme fire weather where dry northerly winds gusting up to 100 km/h coincided with the highest temperatures ever recorded in this region. These conditions, combined with the very high biomass of mature eucalypt forests, very low fuel moisture conditions and steep slopes, generated extreme burning conditions. A rapid response project was launched under the NERC Urgency Scheme aimed at determining the effects of this extreme event on soil properties. Three replicate sites each were sampled for extremely high burn severity, high burn severity and unburnt control terrain, within mature mixed-species eucalypt forests near Marysville in April 2009. Ash and surface soil (0-2.5 cm and 2.5-5 cm) were collected at 20 sample grid points at each site. Here we report on outcomes from Water Drop Penetration Time (WDPT) tests carried out on soil samples to determine the impact of this extreme event on the wettability of a naturally highly water repellent soil. Field assessment suggested that the impact of this extreme wildfire on the soil was less than might be supposed given the extreme burn severity (indicated by the complete elimination of the ground vegetation). This was confirmed by the laboratory results. No major difference in WDPT was detected between (i) burned and control samples, and (ii) between surface and subsurface WDPT patterns, indicating that soil temperatures in the top 0-2.5 cm did not exceed ~200° C. Seedling germination in burned soil was reduced by at least 2/3 compared to the control samples, however, this reduction is indicative an only modest heat input into the soil. The limited heat input into the soil stands in stark contrast to the extreme burn severity (based on vegetation destruction parameters). We speculate that limited soil heating resulted perhaps from the unusually fast-moving fire front and the resultant short fire residence time during this event. Thick ash layers were present at the time of sampling despite some significant earlier pre-sampling rainfall events. This suggests that the wettable ash (up to 15 cm thick) was able to store substantial amounts of water, which would otherwise have formed overland flow moving over the highly water repellent underlying mineral soil. Once this hydrological ‘sponge' is removed, the lack of ground cover is expected to lead to the underlying soil being susceptible to erosion until the ground cover becomes re-established. This ‘erosion window‘ is likely to be relatively brief over much of the burnt area as the vegetation is already showing a comparatively rapid regrowth response. This is supported by initial results from laboratory germination experiments, which showed seedling emergence from even the most severely burnt sites. The factors contributing to the fire impacts determined here are explored in conjunction with predictions for future burn severity under a changing climate. The soil samples collected represent a reference soil sample collection, which are available to the scientific community for further investigation.

Effects of soil pH on the Vicia-micronucleus genotoxicity assay.

PubMed

Dhyèvre, Adrien; Foltête, Anne Sophie; Aran, Delphine; Muller, Serge; Cotelle, Sylvie

2014-11-01

In the field of contaminated sites and soil management, chemical analyses only bring typological data about pollution. As far as bioavailability and effects on organisms are concerned, we need ecotoxicology tools. In this domain, among many existing tests, we chose to study genotoxicity because it is a short-term endpoint with long-term consequences. The aim of this study is to assess the effects of soil pH on the results of the Vicia faba root tip micronucleus test for the two following reasons: (i) to define the pH range within which the test can be performed without modifying the soil to be tested, within the framework of the ISO standard of the test and (ii) to provides information about the effects of the pH on the genotoxic potential of soils. In this context, we modified the pH of a standard soil with HCl or NaOH and we spiked the matrix with copper (2, 4 and 8 mmol kg(-1) dry soil) or with maleic hydrazide, an antigerminative chemical (5, 10 and 20 μmol kg(-1) dry soil). We concluded that the pH had no effect on the mitotic index or micronucleus frequency in the root cells of the negative controls: extreme pH values did not induce micronucleus formation in root cells. Moreover, according to our results, the Vicia-micronucleus test can be performed with pH values ranging between 3.2 and 9.0, but in the ISO 29200 "Soil quality--assessment of genotoxic effects on higher plants--V. faba micronucleus test" we recommended to use a control soil with a pH value ranging between 5 and 8 for a more accurate assessment of chemical genotoxicity. We also found that acid pH could increase the genotoxic potential of pollutants, especially heavy metals. With hydrazide maleic spiked soil, plants were placed in a situation of double stress, i.e. toxicity caused by extreme pH values and toxicity induced by the pollutant. Copyright © 2014 Elsevier B.V. All rights reserved.

Soil response to long-term projections of extreme temperature and precipitation in the southern La Plata Basin

NASA Astrophysics Data System (ADS)

Pántano, Vanesa C.; Penalba, Olga C.

2017-12-01

Projected changes were estimated considering the main variables which take part in soil-atmosphere interaction. The analysis was focused on the potential impact of these changes on soil hydric condition under extreme precipitation and evapotranspiration, using the combination of Global Climate Models (GCMs) and observational data. The region of study is the southern La Plata Basin that covers part of Argentine territory, where rainfed agriculture production is one of the most important economic activities. Monthly precipitation and maximum and minimum temperatures were used from high quality-controlled observed data from 46 meteorological stations and the ensemble of seven CMIP5 GCMs in two periods: 1970-2005 and 2065-2100. Projected changes in monthly effective temperature and precipitation were analysed. These changes were combined with observed series for each probabilistic interval. The result was used as input variables for the water balance model in order to obtain consequent soil hydric condition (deficit or excess). Effective temperature and precipitation are expected to increase according to the projections of GCMs, with few exceptions. The analysis revealed increase (decrease) in the prevalence of evapotranspiration over precipitation, during spring (winter). Projections for autumn months show precipitation higher than potential evapotranspiration more frequently. Under dry extremes, the analysis revealed higher projected deficit conditions, impacting on crop development. On the other hand, under wet extremes, excess would reach higher values only in particular months. During December, projected increase in temperatures reduces the impact of extreme high precipitation but favours deficit conditions, affecting flower-fructification stage of summer crops.

Analysis of the Impact of Climate Change on Extreme Hydrological Events in California

NASA Astrophysics Data System (ADS)

Ashraf Vaghefi, Saeid; Abbaspour, Karim C.

2016-04-01

Estimating magnitude and occurrence frequency of extreme hydrological events is required for taking preventive remedial actions against the impact of climate change on the management of water resources. Examples include: characterization of extreme rainfall events to predict urban runoff, determination of river flows, and the likely severity of drought events during the design life of a water project. In recent years California has experienced its most severe drought in recorded history, causing water stress, economic loss, and an increase in wildfires. In this paper we describe development of a Climate Change Toolkit (CCT) and demonstrate its use in the analysis of dry and wet periods in California for the years 2020-2050 and compare the results with the historic period 1975-2005. CCT provides four modules to: i) manage big databases such as those of Global Climate Models (GCMs), ii) make bias correction using observed local climate data , iii) interpolate gridded climate data to finer resolution, and iv) calculate continuous dry- and wet-day periods based on rainfall, temperature, and soil moisture for analysis of drought and flooding risks. We used bias-corrected meteorological data of five GCMs for extreme CO2 emission scenario rcp8.5 for California to analyze the trend of extreme hydrological events. The findings indicate that frequency of dry period will increase in center and southern parts of California. The assessment of the number of wet days and the frequency of wet periods suggests an increased risk of flooding in north and north-western part of California, especially in the coastal strip. Keywords: Climate Change Toolkit (CCT), Extreme Hydrological Events, California

Effects of Mycorrhizae on Carbon Cycling in Response to Extreme Drought

NASA Astrophysics Data System (ADS)

Ficken, C. D.; Warren, J.

2016-12-01

Plant-mycorrhizal symbioses are being increasingly accepted as drivers of ecosystem-level biogeochemical patterns and play an important role plant resource acquisition. Although some evidence suggests that mycorrhizal association increases plant drought-tolerance, direct comparisons of drought-resilience between mycorrhizal groups (i.e. arbuscular and ectomycorrhizal) are lacking. Indeed, soil CO2 pulses following dry-wet cycles are detectable at the ecosystem scale, but it remains unclear whether these pulses are driven by the activity of mycorrhizae or free-living microbes. These knowledge gaps hinder our ability to predict CO2 fluxes in the face of increased precipitation variability and have broad implications for understanding plant performance during, and recovery following, drought. We predicted that arbuscular mycorrhizae (AM) would be more resilient to drought than ectomycorrhizae (ECM) because narrower AM hyphae may access water from smaller soil pores and because AM produce a glycoprotein that increases soil aggregation. To compare the functioning of AM and ECM throughout drought, we examined soil respiration dynamics between AM- and ECM-dominated mesocosms throughout moderate and extreme drought. Mesocosms were partitioned with mesh dividers into chambers (roots+hyphae+microbes; hyphae+microbes; microbes only) to compare the relative functioning of biotic pools throughout drought. We found that respiration responses to drought differed substantially between AM and ECM-dominated systems. Under dry conditions, respiration from both root- and hyphal-exclusion chambers did not differ between AM and ECM mesocosms. In contrast, under wet conditions, respiration was significantly greater from AM than ECM mesocosms. Following rewetting, the respiration pulse in AM systems was largely due to to free-living microbes (+330% C flux above dry conditions), whereas in ECM systems there was a proportionally greater increase from mycorrhizal chambers (+130%). This suggests, in contrast to our predictions, that ECM fungi are more resilient to drought and are an important driver of C flux following rewetting.

Food Vulnerability and Alluvial Farming for Food Security in Central Dry Zone Area of Myanmar

NASA Astrophysics Data System (ADS)

Boori, M. S.; Choudhary, K.; Evers, M.; Kupriyanov, A.

2017-10-01

The central dry zone area of Myanmar is the most water stressed and also one of the most food insecure regions in the country. In the Dry Zone area, the total population is 10.1 million people in 54 townships, in which approximately 43 % live in below poverty line and 40-50 % of the rural population is landless. Agriculture is the most important economic sector in Myanmar as it is essential for national food security and a major source of livelihood for its people. In this region the adverse effects of climate change such as late or early onset of monsoon season, longer dry spells, erratic rainfall, increasing temperature, heavy rains, stronger typhoons, extreme spatial-temporal variability of rainfall, high intensities, limited rainfall events in the growing season, heat stress, drought, flooding, sea water intrusion, land degradation, desertification, deforestation and other natural disasters are believed to be a major constraint to food insecurity. For food vulnerability, we use following indicators: slope, precipitation, vegetation, soil, erosion, land degradation and harvest failure in ArcGIS software. The erosion is influenced by rainfall and slope, while land degradation is directly related to vegetation, drainage and soil. While harvest failure can be generate by rainfall and flood potential zones. Results show that around 45 % study area comes under very high erosion danger level, 70 % under average harvest failure, 59 % intermediate land degradation area and the overall around 45 % study area comes under insecure food vulnerability zone. Our analysis shows an increase in alluvial farming by 1745.33 km2 since 1988 to reduce the insecure food vulnerability. Food vulnerability map is also relevant to increased population and low income areas. The extreme climatic events are likely increase in frequency and magnitude of serious drought periods and extreme floods. Food insecurity is an important thing that must be reviewed because it relates to the lives of many people. This paper is helpful for identifying the areas of food needs in central dry zone area of Myanmar.

The role of local heating in the 2015 Indian Heat Wave.

PubMed

Ghatak, Debjani; Zaitchik, Benjamin; Hain, Christopher; Anderson, Martha

2017-08-09

India faced a major heat wave during the summer of 2015. Temperature anomalies peaked in the dry period before the onset of the summer monsoon, suggesting that local land-atmosphere feedbacks involving desiccated soils and vegetation might have played a role in driving the heat extreme. Upon examination of in situ data, reanalysis, satellite observations, and land surface models, we find that the heat wave included two distinct peaks: one in late May, and a second in early June. During the first peak we find that clear skies led to a positive net radiation anomaly at the surface, but there is no significant sensible heat flux anomaly within the core of the heat wave affected region. By the time of the second peak, however, soil moisture had dropped to anomalously low levels in the core heat wave region, net surface radiation was anomalously high, and a significant positive sensible heat flux anomaly developed. This led to a substantial local forcing on air temperature that contributed to the intensity of the event. The analysis indicates that the highly agricultural landscape of North and Central India can reinforce heat extremes under dry conditions.

Impact of realistic soil moisture initialization on the representation of extreme events in the western Mediterranean

NASA Astrophysics Data System (ADS)

Helgert, Sebastian; Khodayar, Samiro

2017-04-01

In a warmer Mediterranean climate an increase in the intensity and frequency of extreme events like floods, droughts and extreme heat is expected. The ability to predict such events is still a great challenge and exhibits many uncertainties in the weather forecast and climate predictions. Thereby the missing knowledge about soil moisture-atmosphere interactions and their representation in models is identified as one of the main sources of uncertainty. In this context the soil moisture(SM) plays an important role in the partitioning of sensible and latent heat fluxes on the surface and consequently influences the boundary-layer stability and the precipitation formation. The aim of this research work is to assess the influence of soil moisture-atmosphere interactions on the initiation and development of extreme events in the western Mediterranean (WMED). In this respect the impact of realistic SM initialization on the model representation of extreme events is investigated. High-resolution simulations of different regions in the WMED, including various climate zones from moderate to arid climate, are conducted with the atmospheric COSMO (Consortium for Small-scale Modeling) model in the numerical weather prediction and climate mode. A multiscale temporal and spatial approach is used (days to years, 7km to 2.8km grid spacing). Observational data provided by the framework of the HYdrological cycle in the Mediterranean EXperiment (HyMeX) as well as satellite data such as precipitation from CMORPH (CPC MORPHing technique), evapotranspiration from Land Surface Analysis Satellite Applications Facility (LSA-SAF) and atmospheric moisture from MODIS (Moderate Resolution Imaging Spectroradiometer) are used for process understanding and model validation. To select extreme dry and wet periods the Effective Drought Index (EDI) is calculated. In these periods sensitivity studies of extreme SM initialization scenarios are performed to prove a possible impact of soil moisture on precipitation in the WMED. For the realistic SM initialization different state-of-art high-resolution SM products (25km up to 1km grid spacing) of the Soil Moisture Ocean Salinity mission (SMOS) are examined. A CDF-matching method is applied to reduce the bias between model and SMOS-satellite observation. Moreover, techniques to estimate the initial soil moisture profile from satellite data are tested.

Mercury critical concentrations to Enchytraeus crypticus (Annelida: Oligochaeta) under normal and extreme conditions of moisture in tropical soils - Reproduction and survival.

PubMed

Buch, Andressa Cristhy; Schmelz, Rüdiger M; Niva, Cintia Carla; Correia, Maria Elizabeth Fernandes; Silva-Filho, Emmanoel Vieira

2017-05-01

Soil provides many ecosystem services that are essential to maintain its quality and healthy development of the flora, fauna and human well-being. Environmental mercury levels may harm the survival and diversity of the soil fauna. In this respect, efforts have been made to establish limit values of mercury (Hg) in soils to terrestrial fauna. Soil organisms such as earthworms and enchytraeids have intimate contact with trace metals in soil by their oral and dermal routes, reflecting the potentially adverse effects of this contaminant. The main goal of this study was to obtain Hg critical concentrations under normal and extreme conditions of moisture in tropical soils to Enchytraeus crypticus to order to assess if climate change may potentiate their acute and chronic toxicity effects. Tropical soils were sampled from of two Forest Conservation Units of the Rio de Janeiro State - Brazil, which has been contaminated by Hg atmospheric depositions. Worms were exposed to three moisture conditions, at 20%, 50% and 80% of water holding capacity, respectively, and in combination with different Hg (HgCl 2 ) concentrations spiked in three types of tropical soil (two natural soils and one artificial soil). The tested concentrations ranged from 0 to 512mg Hg kg -1 dry weight. Results indicate that the Hg toxicity is higher under increased conditions of moisture, significantly affecting survival and reproduction rate. Copyright © 2017 Elsevier Inc. All rights reserved.

Peat Soil Stabilization using Lime and Cement

NASA Astrophysics Data System (ADS)

Zambri, Nadhirah Mohd; Ghazaly, Zuhayr Md.

2018-03-01

This paper presents a study of the comparison between two additive Lime and Cement for treating peat soil in term of stabilization. Peat and organic soils are commonly known for their high compressibility, extremely soft, and low strength. The aim of this paper is to determine the drained shear strength of treated peat soil from Perlis for comparison purposes. Direct Shear Box Test was conducted to obtain the shear strength for all the disturbed peat soil samples. The quick lime and cement was mixed with peat soil in proportions of 10% and 20% of the dry weight peat soil. The experiment results showed that the addition of additives had improved the strength characteristics of peat soil by 14% increment in shear strength. In addition, the mixture of lime with peat soil yield higher result in shear strength compared to cement by 14.07% and 13.5% respectively. These findings indicate that the lime and cement is a good stabilizer for peat soil, which often experienced high amount of moisture content.

Microwave emission and crop residues

NASA Technical Reports Server (NTRS)

Jackson, Thomas J.; O'Neill, Peggy E.

1991-01-01

A series of controlled experiments were conducted to determine the significance of crop residues or stubble in estimating the emission of the underlying soil. Observations using truck-mounted L and C band passive microwave radiometers showed that for dry wheat and soybeans the dry residue caused negligible attenuation of the background emission. Green residues, with water contents typical of standing crops, did have a significant effect on the background emission. Results for these green residues also indicated that extremes in plant structure, as created using parallel and perpendicular stalk orientations, can cause very large differences in the degree of attenuation.

Arbuscular mycorrhizal fungi in saline soils: Vertical distribution at different soil depth

PubMed Central

Becerra, Alejandra; Bartoloni, Norberto; Cofré, Noelia; Soteras, Florencia; Cabello, Marta

2014-01-01

Arbuscular mycorrhizal fungi (AMF) colonize land plants in every ecosystem, even extreme conditions such as saline soils. In the present work we report for the first time the mycorrhizal status and the vertical fungal distribution of AMF spores present in the rhizospheric soil samples of four species of Chenopodiaceae (Allenrolfea patagonica, Atriplex argentina, Heterostachys ritteriana and Suaeda divaricata) at five different depths in two saline of central Argentina. Roots showed medium, low or no colonization (0–50%). Nineteen morphologically distinctive AMF species were recovered. The number of AMF spores ranged between 3 and 1162 per 100 g dry soil, and AMF spore number decreased as depth increased at both sites. The highest spore number was recorded in the upper soil depth (0–10 cm) and in S. divaricata. Depending of the host plant, some AMF species sporulated mainly in the deep soil layers (Glomus magnicaule in Allenrolfea patagonica, Septoglomus aff. constrictum in Atriplex argentina), others mainly in the top layers (G. brohultti in Atriplex argentina and Septoglomus aff. constrictum in Allenrolfea patagonica). Although the low percentages of colonization or lack of it, our results show a moderate diversity of AMF associated to the species of Chenopodiaceae investigated in this study. The taxonomical diversity reveals that AMF are adapted to extreme environmental conditions from saline soils of central Argentina. PMID:25242945

Colonization patterns of soil microbial communities in the Atacama Desert.

PubMed

Crits-Christoph, Alexander; Robinson, Courtney K; Barnum, Tyler; Fricke, W Florian; Davila, Alfonso F; Jedynak, Bruno; McKay, Christopher P; Diruggiero, Jocelyne

2013-11-20

The Atacama Desert is one of the driest deserts in the world and its soil, with extremely low moisture, organic carbon content, and oxidizing conditions, is considered to be at the dry limit for life. Analyses of high throughput DNA sequence data revealed that bacterial communities from six geographic locations in the hyper-arid core and along a North-South moisture gradient were structurally and phylogenetically distinct (ANOVA test for observed operating taxonomic units at 97% similarity (OTU0.03), P <0.001) and that communities from locations in the hyper-arid zone displayed the lowest levels of diversity. We found bacterial taxa similar to those found in other arid soil communities with an abundance of Rubrobacterales, Actinomycetales, Acidimicrobiales, and a number of families from the Thermoleophilia. The extremely low abundance of Firmicutes indicated that most bacteria in the soil were in the form of vegetative cells. Integrating molecular data with climate and soil geochemistry, we found that air relative humidity (RH) and soil conductivity significantly correlated with microbial communities' diversity metrics (least squares linear regression for observed OTU0.03 and air RH and soil conductivity, P <0.001; UniFrac PCoA Spearman's correlation for air RH and soil conductivity, P <0.0001), indicating that water availability and salt content are key factors in shaping the Atacama soil microbiome. Mineralization studies showed communities actively metabolizing in all soil samples, with increased rates in soils from the southern locations. Our results suggest that microorganisms in the driest soils of the Atacama Desert are in a state of stasis for most of the time, but can potentially metabolize if presented with liquid water for a sufficient duration. Over geological time, rare rain events and physicochemical factors potentially played a major role in selecting micro-organisms that are most adapted to extreme desiccating conditions.

Colonization patterns of soil microbial communities in the Atacama Desert

PubMed Central

2013-01-01

Background The Atacama Desert is one of the driest deserts in the world and its soil, with extremely low moisture, organic carbon content, and oxidizing conditions, is considered to be at the dry limit for life. Results Analyses of high throughput DNA sequence data revealed that bacterial communities from six geographic locations in the hyper-arid core and along a North-South moisture gradient were structurally and phylogenetically distinct (ANOVA test for observed operating taxonomic units at 97% similarity (OTU0.03), P <0.001) and that communities from locations in the hyper-arid zone displayed the lowest levels of diversity. We found bacterial taxa similar to those found in other arid soil communities with an abundance of Rubrobacterales, Actinomycetales, Acidimicrobiales, and a number of families from the Thermoleophilia. The extremely low abundance of Firmicutes indicated that most bacteria in the soil were in the form of vegetative cells. Integrating molecular data with climate and soil geochemistry, we found that air relative humidity (RH) and soil conductivity significantly correlated with microbial communities’ diversity metrics (least squares linear regression for observed OTU0.03 and air RH and soil conductivity, P <0.001; UniFrac PCoA Spearman’s correlation for air RH and soil conductivity, P <0.0001), indicating that water availability and salt content are key factors in shaping the Atacama soil microbiome. Mineralization studies showed communities actively metabolizing in all soil samples, with increased rates in soils from the southern locations. Conclusions Our results suggest that microorganisms in the driest soils of the Atacama Desert are in a state of stasis for most of the time, but can potentially metabolize if presented with liquid water for a sufficient duration. Over geological time, rare rain events and physicochemical factors potentially played a major role in selecting micro-organisms that are most adapted to extreme desiccating conditions. PMID:24451153

MACHYDRO-90 - The microwave aircraft experiment for hydrology

NASA Technical Reports Server (NTRS)

Engman, Edwin T.

1991-01-01

MACHYDRO-90 is a multisensor aircraft campaign (MAC) that was held in central Pennsylvania over an eleven day period in July 1990. The emphasis of the campaign was on the microwave measurements of soil moisture, although other aspects of hydrology and microwave-target interactions were also studied. A description is given of the experiment, its organization, and the meteorological conditions during the eleven days. Preliminary results are also presented from PBMR (Push-Broom Microwave Radiometer) and SAR (synthetic aperture radar) measurements of soil moisture. These results are portrayed in the context of the hydrology, which, during this experiment, exhibited dry and wet extremes.

Heavy metals in summer squash fruits grown in soil amended with municipal sewage sludge.

PubMed

Antonious, George F; Snyder, John C; Dennis, Sam O

2010-02-01

The increasing awareness of the value of vegetables and fruits in the human diet requires monitoring of heavy metals in food crops. The effects of amending soil with compost made from municipal sewage sludge (MSS) and MSS mixed with yard waste (MSS-YW) on Cd, Cr, Mo, Cu, Zn, Pb, and Ni concentrations in soil and the potential bioaccumulation of heavy metals in squash fruits at harvest were investigated. A field study was conducted in a silty-loam soil at Kentucky State University Research Farm. Eighteen plots of 22 x 3.7 m each were separated using metal borders and the soil in six plots was mixed with MSS at 15 t acre(-1), six plots were mixed with MSS-YW at 15 t acre(-1) (on dry weight basis), and six unamended plots (no-mulch) were used for comparison purposes. Plots were planted with summer squash and heavy metals were analyzed in soil and mature fruits at harvest. Analysis of heavy metals in squash fruits was conducted using inductively coupled plasma spectrometry. Zinc and Cu concentrations in soil mixed with MSS were extremely high compared to other metals. In squash fruits, concentrations of Zn were generally greater than Cu. Total squash marketable yield was greatest in MSS-YW and MSS treatments compared to no-mulch conventional soil. Concentrations of Cd and Pb in soil amended with MSS averaged 0.1 and 1.4 mg kg(-1), respectively. These levels were much lower than the limits in the U.S. guidelines for using MSS in land farming. Data revealed that maximum concentrations of Cd and Pb in squash fruits were 0.03 and 0.01 microg g(-1) dry fruit, respectively. Nickel concentration in squash fruits fluctuated among harvest dates reaching a maximum of 2.5 microg g(-1) dry fruit. However, these concentrations were far below their permissible limits in edible fruits.

An inorganic CO2 diffusion and dissolution process explains negative CO2 fluxes in saline/alkaline soils.

PubMed

Ma, Jie; Wang, Zhong-Yuan; Stevenson, Bryan A; Zheng, Xin-Jun; Li, Yan

2013-01-01

An 'anomalous' negative flux, in which carbon dioxide (CO2) enters rather than is released from the ground, was studied in a saline/alkaline soil. Soil sterilization disclosed an inorganic process of CO2 dissolution into (during the night) and out of (during the day) the soil solution, driven by variation in soil temperature. Experimental and modeling analysis revealed that pH and soil moisture were the most important determinants of the magnitude of this inorganic CO2 flux. In the extreme cases of air-dried saline/alkaline soils, this inorganic process was predominant. While the diurnal flux measured was zero sum, leaching of the dissolved inorganic carbon in the soil solution could potentially effect net carbon ecosystem exchange. This finding implies that an inorganic module should be incorporated when dealing with the CO2 flux of saline/alkaline land. Neglecting this inorganic flux may induce erroneous or misleading conclusions in interpreting CO2 fluxes of these ecosystems.

An inorganic CO2 diffusion and dissolution process explains negative CO2 fluxes in saline/alkaline soils

PubMed Central

Ma, Jie; Wang, Zhong-Yuan; Stevenson, Bryan A.; Zheng, Xin-Jun; Li, Yan

2013-01-01

An ‘anomalous' negative flux, in which carbon dioxide (CO2) enters rather than is released from the ground, was studied in a saline/alkaline soil. Soil sterilization disclosed an inorganic process of CO2 dissolution into (during the night) and out of (during the day) the soil solution, driven by variation in soil temperature. Experimental and modeling analysis revealed that pH and soil moisture were the most important determinants of the magnitude of this inorganic CO2 flux. In the extreme cases of air-dried saline/alkaline soils, this inorganic process was predominant. While the diurnal flux measured was zero sum, leaching of the dissolved inorganic carbon in the soil solution could potentially effect net carbon ecosystem exchange. This finding implies that an inorganic module should be incorporated when dealing with the CO2 flux of saline/alkaline land. Neglecting this inorganic flux may induce erroneous or misleading conclusions in interpreting CO2 fluxes of these ecosystems. PMID:23778238

Assessing the evolution of soil moisture and vegetation conditions during the 2012 United States flash drought

USGS Publications Warehouse

Otkin, Jason A.; Anderson, Martha C.; Hain, Christopher; Svoboda, Mark; Johnson, David; Mueller, Richard; Tadesse, Tsegaye; Wardlow, Brian D.; Brown, Jesslyn

2016-01-01

This study examines the evolution of several model-based and satellite-derived drought metrics sensitive to soil moisture and vegetation conditions during the extreme flash drought event that impacted major agricultural areas across the central U.S. during 2012. Standardized anomalies from the remote sensing based Evaporative Stress Index (ESI) and Vegetation Drought Response Index (VegDRI) and soil moisture anomalies from the North American Land Data Assimilation System (NLDAS) are compared to the United States Drought Monitor (USDM), surface meteorological conditions, and crop and soil moisture data compiled by the National Agricultural Statistics Service (NASS).Overall, the results show that rapid decreases in the ESI and NLDAS anomalies often preceded drought intensification in the USDM by up to 6 wk depending on the region. Decreases in the ESI tended to occur up to several weeks before deteriorations were observed in the crop condition datasets. The NLDAS soil moisture anomalies were similar to those depicted in the NASS soil moisture datasets; however, some differences were noted in how each model responded to the changing drought conditions. The VegDRI anomalies tracked the evolution of the USDM drought depiction in regions with slow drought development, but lagged the USDM and other drought indicators when conditions were changing rapidly. Comparison to the crop condition datasets revealed that soybean conditions were most similar to ESI anomalies computed over short time periods (2–4 wk), whereas corn conditions were more closely related to longer-range (8–12 wk) ESI anomalies. Crop yield departures were consistent with the drought severity depicted by the ESI and to a lesser extent by the NLDAS and VegDRI datasets.

Water regime influences bulk soil and Rhizosphere of Cereus jamacaru bacterial communities in the Brazilian Caatinga biome.

PubMed

Nessner Kavamura, Vanessa; Taketani, Rodrigo Gouvêa; Lançoni, Milena Duarte; Andreote, Fernando Dini; Mendes, Rodrigo; Soares de Melo, Itamar

2013-01-01

We used the T-RFLP technique combined with Ion Torrent (PGM) sequencing of 16S rRNA and multivariate analysis to study the structure of bulk soil and rhizosphere bacterial communities of a cactus, Cereus jamacaru, from the Brazilian Caatinga biome, which is unique to Brazil. The availability of water shapes the rhizosphere communities, resulting in different patterns during the rainy and dry seasons. Taxonomic approaches and statistical analysis revealed that the phylum Actinobacteria strongly correlated with the dry season, while samples from the rainy season exhibited a strong correlation with the phylum Proteobacteria for rhizosphere samples and with the phyla Bacteroidetes, Firmicutes, Lentisphaerae, and Tenericutes for bulk soil samples. The STAMP software also indicated that the phylum Bacteroidetes, as well as two classes in the Proteobacteria phylum (γ and δ), were the most significant ones during the rainy season. The average abundance of the phylum Actinobacteria and the genus Bacillus was significantly greater during the dry season. Some significant genera found during the dry season might reflect their tolerance to the extreme conditions found in the Caatinga biome. They may also indicate the ecological function that microorganisms play in providing plants with some degree of tolerance to water stress or in assisting in their development through mechanisms of growth promotion. Alterations in microbial communities can be due to the different abilities of native microorganisms to resist and adapt to environmental changes.

Water Regime Influences Bulk Soil and Rhizosphere of Cereus jamacaru Bacterial Communities in the Brazilian Caatinga Biome

PubMed Central

Nessner Kavamura, Vanessa; Taketani, Rodrigo Gouvêa; Lançoni, Milena Duarte; Andreote, Fernando Dini; Mendes, Rodrigo; Soares de Melo, Itamar

2013-01-01

We used the T-RFLP technique combined with Ion Torrent (PGM) sequencing of 16S rRNA and multivariate analysis to study the structure of bulk soil and rhizosphere bacterial communities of a cactus, Cereus jamacaru, from the Brazilian Caatinga biome, which is unique to Brazil. The availability of water shapes the rhizosphere communities, resulting in different patterns during the rainy and dry seasons. Taxonomic approaches and statistical analysis revealed that the phylum Actinobacteria strongly correlated with the dry season, while samples from the rainy season exhibited a strong correlation with the phylum Proteobacteria for rhizosphere samples and with the phyla Bacteroidetes, Firmicutes, Lentisphaerae, and Tenericutes for bulk soil samples. The STAMP software also indicated that the phylum Bacteroidetes, as well as two classes in the Proteobacteria phylum (γ and δ), were the most significant ones during the rainy season. The average abundance of the phylum Actinobacteria and the genus Bacillus was significantly greater during the dry season. Some significant genera found during the dry season might reflect their tolerance to the extreme conditions found in the Caatinga biome. They may also indicate the ecological function that microorganisms play in providing plants with some degree of tolerance to water stress or in assisting in their development through mechanisms of growth promotion. Alterations in microbial communities can be due to the different abilities of native microorganisms to resist and adapt to environmental changes. PMID:24069212

Effects of human trampling on populations of soil fauna in the McMurdo Dry Valleys, Antarctica.

PubMed

Ayres, Edward; Nkem, Johnson N; Wall, Diana H; Adams, Byron J; Barrett, J E; Broos, Emma J; Parsons, Andrew N; Powers, Laura E; Simmons, Breana L; Virginia, Ross A

2008-12-01

Antarctic ecosystems are often considered nearly pristine because levels of anthropogenic disturbance are extremely low there. Nevertheless, over recent decades there has been a rapid increase in the number of people, researchers and tourists, visiting Antarctica. We evaluated, over 10 years, the direct impact of foot traffic on the abundance of soil animals and soil properties in Taylor Valley within the McMurdo Dry Valleys region of Antarctica. We compared soils from minimally disturbed areas with soils from nearby paths that received intermediate and high levels of human foot traffic (i.e., up to approximately 80 passes per year). The nematodes Scottnema lindsayae and Eudorylaimus sp. were the most commonly found animal species, whereas rotifers and tardigrades were found only occasionally. On the highly trampled footpaths, abundance of S. lindsayae and Eudorylaimus sp. was up to 52 and 76% lower, respectively, than in untrampled areas. Moreover, reduction in S. lindsayae abundance was more pronounced after 10 years than 2 years and in the surface soil than in the deeper soil, presumably because of the longer period of disturbance and the greater level of physical disturbance experienced by the surface soil. The ratio of living to dead Eudorylaimus sp. also declined with increased trampling intensity, which is indicative of increased mortality or reduced fecundity. At one site there was evidence that high levels of trampling reduced soil CO(2) fluxes, which is related to total biological activity in the soil. Our results show that even low levels of human traffic can significantly affect soil biota in this ecosystem and may alter ecosystem processes, such as carbon cycling. Consequently, management and conservation plans for Antarctic soils should consider the high sensitivity of soil fauna to physical disturbance as human presence in this ecosystem increases.

What drives the interannual variations in carbon fluxes and balance in a tropical rainforest of French Guiana?

NASA Astrophysics Data System (ADS)

Aguilos, M. M.; Burban, B.; Wagner, F. H.; Hérault, B.; Bonal, D.

2016-12-01

Amazon rainforest - a major contributor to the global carbon sink, is not on steady state and this affects terrestrial carbon pools. Yet, information on the effect of climatic extremes to long-term carbon fluxes is lacking. Thus, using an 11-year eddy covariance data, we examined the carbon fluxes and net carbon uptake in French Guiana's tropical rainforest to determine the interannual and seasonal variations in gross primary production (GPP), ecosystem respiration (RE) and net ecosystem exchange (NEE), so with climatic drivers influencing such changes from 2004 - 2014. GPP varies from 3394.9 g C m‒2 yr‒1 to 4054.5 g C m‒2 yr‒1. RE is more varied than GPP (3057.4 g C m‒2 yr‒1 - 3425.9 g C m‒2 yr‒1. NEE has large interannual variability from ‒68.2 g C m‒2 yr‒1 to ‒596.2 g C m‒2 yr‒1. NEE during wet seasons had higher sink strength than in dry periods. The sudden drop of RE during wet period in 2007 - 2009 may help explain this as it almost doubled the net uptake while GPP had slighter declines. The pattern of NEE appears to be driven by higher rate of increase in RE during dry season with less comparable rise in GPP. This suggests that over 11 years, the ecosystem did not suffer any extreme dry condition strong enough to induce severe decrease in RE. Annually, global radiation (Rg) explains 49% (P<0.0001) for GPP, 42% (P<0.0001) for RE, and 21% (P<0.0001) for NEE. During the wet season, Rg still controls GPP (r2 = 0.45; P <0.0001), RE (r2 = 0.30; P<0.0001;) and NEE (r2 = 0.31; P<0.0001). However, relative extractable water (REW) manifested more strongly during the dry period explaining mainly the variations of GPP (r2 = 0.20; P < 0.0001), RE (r2 = 0.33; P < 0.0001) and NEE (r2 = 0.25; P < 0.0001). Deep rooting system of trees may have caused GPP unsuppressed despite low soil moisture. Therefore, modeling studies must consider incorporating soil water measurements in deeper soils as most tropical trees are dependent on deep soil moisture to avoid water stress.

Potential aboveground biomass in drought-prone forest used for rangeland pastoralism.

PubMed

Fensham, R J; Fairfax, R J; Dwyer, J M

2012-04-01

The restoration of cleared dry forest represents an important opportunity to sequester atmospheric carbon. In order to account for this potential, the influences of climate, soils, and disturbance need to be deciphered. A data set spanning a region defined the aboveground biomass of mulga (Acacia aneura) dry forest and was analyzed in relation to climate and soil variables using a Bayesian model averaging procedure. Mean annual rainfall had an overwhelmingly strong positive effect, with mean maximum temperature (negative) and soil depth (positive) also important. The data were collected after a recent drought, and the amount of recent tree mortality was weakly positively related to a measure of three-year rainfall deficit, and maximum temperature (positive), soil depth (negative), and coarse sand (negative). A grazing index represented by the distance of sites to watering points was not incorporated by the models. Stark management contrasts, including grazing exclosures, can represent a substantial part of the variance in the model predicting biomass, but the impact of management was unpredictable and was insignificant in the regional data set. There was no evidence of density-dependent effects on tree mortality. Climate change scenarios represented by the coincidence of historical extreme rainfall deficit with extreme temperature suggest mortality of 30.1% of aboveground biomass, compared to 21.6% after the recent (2003-2007) drought. Projections for recovery of forest using a mapping base of cleared areas revealed that the greatest opportunities for restoration of aboveground biomass are in the higher-rainfall areas, where biomass accumulation will be greatest and droughts are less intense. These areas are probably the most productive for rangeland pastoralism, and the trade-off between pastoral production and carbon sequestration will be determined by market forces and carbon-trading rules.

Xeropreservation of Functionalized Lipid Biomarkers in Hyperarid Soils in the Atacama Desert

NASA Technical Reports Server (NTRS)

Wilhelm, Mary Beth; Davila, Alfonso F.; Eigenbrode, Jennifer L.; Parenteau, Mary N.; Jahnke, Linda L.; Liu, Xiao-Lei; Summons, Rogers E.; Wray, James J.; Stamos, Brian N.; O'Reilly, Shane S.;

Xeropreservation of functionalized lipid biomarkers in hyperarid soils in the Atacama Desert

PubMed Central

Wilhelm, Mary Beth; Davila, Alfonso F.; Eigenbrode, Jennifer L.; Parenteau, Mary N.; Jahnke, Linda L.; Liu, Xiao-Lei; Summons, Roger E.; Wray, James J.; Stamos, Brian N.; O’Reilly, Shane S.; Williams, Amy

2018-01-01

Our understanding of long-term organic matter preservation comes mostly from studies in aquatic systems. In contrast, taphonomic processes in extremely dry environments are relatively understudied and are poorly understood. We investigated the accumulation and preservation of lipid biomarkers in hyperarid soils in the Yungay region of the Atacama Desert. Lipids from seven soil horizons in a 2.5 m vertical profile were extracted and analyzed using GC-MS and LC-MS. Diagnostic functionalized lipids and geolipids were detected and increased in abundance and diversity with depth. Deeper clay units contain fossil organic matter (radiocarbon dead) that has been protected from rainwater since the onset of hyperaridity. We show that these clay units contain lipids in an excellent state of structural preservation with functional groups and unsaturated bonds in carbon chains. This indicates that minimal degradation of lipids has occurred in these soils since the time of their deposition between >40,000 and 2 million years ago. The exceptional structural preservation of biomarkers is likely due to the long-term hyperaridity that has minimized microbial and enzymatic activity, a taphonomic process we term xeropreservation (i.e. preservation by drying). The degree of biomarker preservation allowed us to reconstruct major changes in ecology in the Yungay region that reflect a shift in hydrological regime from wet to dry since the early Quaternary. Our results suggest that hyperarid environments, which comprise 7.5% of the continental landmass, could represent a rich and relatively unexplored source of paleobiological information on Earth. PMID:29743757

Phosphatase activity in Antarctica soil samples as a biosignature of extant life

NASA Astrophysics Data System (ADS)

Sato, Shuji; Itoh, Yuki; Takano, Yoshinori; Fukui, Manabu; Kaneko, Takeo; Kobayashi, Kensei

Microbial activities have been detected in such extreme terrestrial environments as deep lithosphere, a submarine hydrothermal systems, stratosphere, and Antarctica. Microorganisms have adapted to such harsh environments by evolving their biomolecules. Some of these biomolecules such as enzymes might have different characteristics from those of organisms in ordinary environments. Many biosignatures (or biomarkers) have been proposed to detect microbial activities in such extreme environments. A number of techniques are proposed to evaluate biological activities in extreme environments including cultivation methods, assay of metabolism, and analysis of bioorganic compounds like amino acids and DNA. Enzyme activities are useful signature of extant life in extreme environments. Among many enzymes, phosphatase could be a good indicator of biological activities, since phosphate esters are essential for all the living terrestrial organisms. In addition, alkaline phosphatase is known as a typical zinc-containing metalloenzyme and quite stable in environments. We analyzed phosphatase activities in Antarctica soil samples to see whether they can be used as biosignatures for extant life. In addition, we characterized phosphatases extracted from the Antarctica soil samples, and compared with those obtained from other types of environments. Antarctica surface environments are quite severe environments for life since it is extremely cold and dry and exposed to strong UV and cosmic rays. We tried to evaluate biological activities in Antarctica by measuring phosphatase activities. Surface soil samples are obtained at the Sites 1-8 near Showa Base in Antarctica during the 47th Japan Antarctic exploration mission in 2005-6. Activities of acid phosphatase (ACP) and alkaline phosphatase (ALP) are measured spectrophotometrically after mixing the powdered sample and p-nitrophenyl phosphate solution (pH 6.5 for ACP, pH 8.0 for ALP). ALP was characterized after extraction from soils with Tris-HCl buffer (pH 9.0), where the activity was measured fluorometrically with 4-methylumbelliferyl phosphate (pH 8.0) as a substance. The soil of Site 8 (near a penguin rookery) showed almost the same level of ACP and ALP activities as usual surface soil sampled in YNU campus, while the soil of Sites 1-7 showed much less activities. ALP in the extract from the soil of Site 8 was characterized. It showed the maximal at 338 K, while ALP from the campus soil showed the maximal at 358 K. Gel filtration chromatography showed that the ALP activity was found only in the fraction whose molecular weights were over 60000. The ALP activity was diminished with EDTA and was recovered with addition of zinc ion. The present results showed that zinc-containing metalloenzymes, which had lower optimum temperature than those in usual environments, are present in Antarctica soil. It was suggested that phosphatases are good bio-signatures for extant life in extreme environments.

Evidence of hydraulic lift for pre-rainy season leaf out and dry-season stem water enrichment in Sclerocarya birrea, a tropical agroforestry tree

NASA Astrophysics Data System (ADS)

Ceperley, Natalie; Mande, Theophile; Rinaldo, Andrea; Parlange, Marc B.

2014-05-01

We use stable isotopes of water as tracers to follow water use by five Sclerocarya birrea trees in a catchment in South Eastern Burkina Faso interspersed with millet fields, gallery forest, Sudanian savanna, and fallow fields. Isotopic ratios were determined from water extracted from stems of the trees and sub-canopy soil of two of them, while nearby ground water, precipitation, and surface water was sampled weekly. A unique configuration of sensors connected with a wireless sensor network of meteorological stations measured sub-canopy shading, the temperature and humidity in the canopy, through-fall, and soil moisture under two of the trees. Both water extracted from sap and water extracted from soil is extremely enriched in the dry season, but drop to levels close to the ground water in February or March, which coincides with the growth of leaves. Dates of leaf out were confirmed by changes in δDH and δO18 concentrations of water, photographic documentation & pixel analysis, and analysis of sub-canopy radiation and proceeded the rise in humidity and flow that was later detected in the sub-canopy soil, the trunk of the tree (sap-flow), and atmosphere (canopy VPD). Examination of the isotopic signature suggests that size of tree plays an important role in duration and timing of this leaf-out as well as the degree of enrichment during the peak of the dry season. Further examination of the isotopic signatures of the roots suggested that the trees are performing hydraulic redistribution, or lifting the ground water and "sharing it" with the soil in the rooting zone in the dry season. The enriched level of xylem in this case is a product of water loss, and enrichment, along the travel path of the water from the roots to the tip of the stem, as evidenced by the variation according to size of tree. Vapor pressure deficit, soil water, and soil moisture interactions support this picture of interacting controls, separate from hydrologic triggers on the water movement in the tree.

Microbial ecology of extreme environments: Antarctic dry valley yeasts and growth in substrate limited habitats

NASA Technical Reports Server (NTRS)

Vishniac, H. S.

1981-01-01

The multiple stresses temperature, moisture, and for chemoheterotrophs, sources of carbon and energy of the Dry Valley Antarctica soils allow at best depauperate communities, low in species diversity and population density. The nature of community structure, the operation of biogeochemical cycles, the evolution and mechanisms of adaptation to this habitat are of interest in informing speculations upon life on other planets as well as in modeling the limits of gene life. Yeasts of the Cryptococcus vishniacil complex (Basidiobiastomycetes) are investigated, as the only known indigenes of the most hostile, lichen free, parts of the Dry Valleys. Methods were developed for isolating these yeasts (methods which do not exclude the recovery of other microbiota). The definition of the complex was refined and the importance of nitrogen sources was established as well as substrate competition in fitness to the Dry Valley habitats.

A Modeling Study of the Spring 2011 Extreme US Weather Activity

NASA Technical Reports Server (NTRS)

Schubert, S.; Suarez, M.; Chang, Y.

2012-01-01

The spring of 2011 was characterized by record-breaking tornadic activity with substantial loss of life and destruction of property. While a waning La Nina and other atmospheric teleconnections have been implicated in the development of these extreme weather events, a quantitative assessment of their causes is still lacking. This study uses high resolution (1/4 lat/lon) GEOS-5 AGCM experiments to quantify the role of SSTs and soil moisture in the development of the extreme weather activity with a focus on April - the month of peak tornadic activity. The simulations, consisting of 22-member ensembles of three-month long simulations (initialized March 1st) reproduce the main features of the observed large-scale changes including the below-normal temperature and above-normal precipitation in the Central US, and the hot and dry conditions to the south. Various sensitivity experiments are conducted to separate the roles of the SST, soil moisture and the initial atmospheric conditions in the development and predictability of the atmospheric conditions (wind shear, moisture, etc.) favoring the severe weather activity and flooding.

Characterizing differences in precipitation regimes of extreme wet and dry years: implications for climate change experiments.

PubMed

Knapp, Alan K; Hoover, David L; Wilcox, Kevin R; Avolio, Meghan L; Koerner, Sally E; La Pierre, Kimberly J; Loik, Michael E; Luo, Yiqi; Sala, Osvaldo E; Smith, Melinda D

2015-02-03

Climate change is intensifying the hydrologic cycle and is expected to increase the frequency of extreme wet and dry years. Beyond precipitation amount, extreme wet and dry years may differ in other ways, such as the number of precipitation events, event size, and the time between events. We assessed 1614 long-term (100 year) precipitation records from around the world to identify key attributes of precipitation regimes, besides amount, that distinguish statistically extreme wet from extreme dry years. In general, in regions where mean annual precipitation (MAP) exceeded 1000 mm, precipitation amounts in extreme wet and dry years differed from average years by ~40% and 30%, respectively. The magnitude of these deviations increased to >60% for dry years and to >150% for wet years in arid regions (MAP<500 mm). Extreme wet years were primarily distinguished from average and extreme dry years by the presence of multiple extreme (large) daily precipitation events (events >99th percentile of all events); these occurred twice as often in extreme wet years compared to average years. In contrast, these large precipitation events were rare in extreme dry years. Less important for distinguishing extreme wet from dry years were mean event size and frequency, or the number of dry days between events. However, extreme dry years were distinguished from average years by an increase in the number of dry days between events. These precipitation regime attributes consistently differed between extreme wet and dry years across 12 major terrestrial ecoregions from around the world, from deserts to the tropics. Thus, we recommend that climate change experiments and model simulations incorporate these differences in key precipitation regime attributes, as well as amount into treatments. This will allow experiments to more realistically simulate extreme precipitation years and more accurately assess the ecological consequences. © 2015 John Wiley & Sons Ltd.

Forest response to heat waves at the dry timberline

NASA Astrophysics Data System (ADS)

Yakir, D.; Rotenberg, E.; Tatrinov, F.; Ogee, J.; Maseyk, K.

2012-04-01

Predictions of climate change consistently indicate continuous warming and drying for the entire Mediterranean basin and other regions during the next century. Investigating forest functioning at the current dry and hot "timberline" has therefore implications for predicting future forest distribution. In such investigations we should consider the forest adjustments to extreme conditions both at the long-term average climate basis, as at the time-scale of episodic extreme events, such as heat waves and droughts. Investigating both aspects in a 45-yr old semi-arid pine forest at the dry timberline (<300 mm annual rainfall) we observe adjustments that improve carbon-, nitrogen- and water- use efficiencies. An important aspect in the ecosystem sustainability is its ability to rapidly recover from extreme conditions, both at the short-term and the seasonal scale. A remarkable example is provided by the episodes (usually 2-4 days) of Easterly dry and hot air that are common in spring (so-called "Hamsin" events). During these events air temperature increases and relative humidity decreases within hours by 10˚C and 40%, respectively. Net ecosystem CO2 exchange (NEE) and photosynthesis (GPP) sharply decline, predominantly in response to the drastic increase in vapor pressure deficit (up to 6kPa), but then show full recovery to the pre-stress values within 24 h past the event. Similarly, following 5-6 months of seasonal drought, the forest resumes high photosynthetic activity within ~5 days following the first rain episode of about 10 mm in the fall. We show that these transient responses are useful in partitioning between the ecosystem responses to short-term atmosphere-driven stress and longer-term soil moisture stress. An ecosystem model (MuSICA) was used to test our understandings of underlying processes, and our ability to account for such differential responses.

The role of hydrological initial conditions on Atmospheric River floods in the Russian River basin

NASA Astrophysics Data System (ADS)

Cao, Q.; Mehran, A.; Ralph, M.; Cannon, F.; Lettenmaier, D. P.

2017-12-01

A body of work over the last decade or so has demonstrated that most major floods along the U.S. West Coast are attributable to Atmospheric Rivers (ARs). Antecedent hydrological conditions play an important part in the natural links between precipitation and floods, and this is especially the case in the Pacific Coastal region where precipitation is strongly winter-dominant, and many potentially flood-inducing events occur relatively early in the wet season. The Russian River Basin has these characteristics, the result of which is mostly dry soils at the onset of the fall precipitation season. There is therefore a tradeoff in terms of flood potential between the strength of AR events, and the time history of previous precipitation that has begun to wet soils and raise local water tables. In order to examine flood responses associated with varying precursor hydrological conditions, we first constructed a data set of AR events that were coincident with Peaks Over Threshold (POT) extreme discharge events at selected USGS stream gauges throughout the Russian River basin. We investigated the role of antecedent soil moisture and water table conditions on historical AR flooding, initially using an exploratory data analysis approach. We then implemented the Distributed Hydrology-Soil-Vegetation Model (DHSVM) over the entire basin and conducted modeling experiments for each of the POT events under climatological and extreme antecedent conditions. We reconstructed climatological soil moisture by assimilating in situ observations into long-term soil moisture simulations from the UCLA Western U.S. Drought Monitoring System. We explore an envelope of frequency distributions of floods given a range of AR-related extreme precipitation and various initial hydrologic conditions, which eventually should have implications for flood management decision-making.

Evaluating the influence of antecedent soil moisture on variability of the North American Monsoon precipitation in the coupled MM5/VIC modeling system

DOE Office of Scientific and Technical Information (OSTI.GOV)

Zhu, Chunmei; Leung, Lai R.; Gochis, David

2009-11-29

The influence of antecedent soil moisture on North American monsoon system (NAMS) precipitation variability was explored using the MM5 mesoscale model coupled with the Variable Infiltration Capacity (VIC) land surface model. Sensitivity experiments were performed with extreme wet and dry initial soil moisture conditions for both the 1984 wet monsoon year and the 1989 dry year. The MM5-VIC model reproduced the key features of NAMS in 1984 and 1989 especially over northwestern Mexico. Our modeling results indicate that the land surface has memory of the initial soil wetness prescribed at the onset of the monsoon that persists over most ofmore » the region well into the monsoon season (e.g. until August). However, in contrast to the classical thermal contrast concept, where wetter soils lead to cooler surface temperatures, less land-sea thermal contrast, weaker monsoon circulations and less precipitation, the coupled model consistently demonstrated a positive soil moisture – precipitation feedback. Specifically, anomalously wet premonsoon soil moisture always lead to enhanced monsoon precipitation, and the reverse was also true. The surface temperature changes induced by differences in surface energy flux partitioning associated with pre-monsoon soil moisture anomalies changed the surface pressure and consequently the flow field in the coupled model, which in turn changed moisture convergence and, accordingly, precipitation patterns. Both the largescale circulation change and local land-atmospheric interactions in response to premonsoon soil moisture anomalies play important roles in the coupled model’s positive soil moisture monsoon precipitation feedback. However, the former may be sensitive to the strength and location of the thermal anomalies, thus leaving open the possibility of both positive and negative soil moisture precipitation feedbacks.« less

Precipitation Regime Shift Enhanced the Rain Pulse Effect on Soil Respiration in a Semi-Arid Steppe

PubMed Central

Yan, Liming; Chen, Shiping; Xia, Jianyang; Luo, Yiqi

2014-01-01

The effect of resource pulses, such as rainfall events, on soil respiration plays an important role in controlling grassland carbon balance, but how shifts in long-term precipitation regime regulate rain pulse effect on soil respiration is still unclear. We first quantified the influence of rainfall event on soil respiration based on a two-year (2006 and 2009) continuously measured soil respiration data set in a temperate steppe in northern China. In 2006 and 2009, soil carbon release induced by rainfall events contributed about 44.5% (83.3 g C m−2) and 39.6% (61.7 g C m−2) to the growing-season total soil respiration, respectively. The pulse effect of rainfall event on soil respiration can be accurately predicted by a water status index (WSI), which is the product of rainfall event size and the ratio between antecedent soil temperature to moisture at the depth of 10 cm (r 2 = 0.92, P<0.001) through the growing season. It indicates the pulse effect can be enhanced by not only larger individual rainfall event, but also higher soil temperature/moisture ratio which is usually associated with longer dry spells. We then analyzed a long-term (1953–2009) precipitation record in the experimental area. We found both the extreme heavy rainfall events (>40 mm per event) and the long dry-spells (>5 days) during the growing seasons increased from 1953–2009. It suggests the shift in precipitation regime has increased the contribution of rain pulse effect to growing-season total soil respiration in this region. These findings highlight the importance of incorporating precipitation regime shift and its impacts on the rain pulse effect into the future predictions of grassland carbon cycle under climate change. PMID:25093573

Precipitation regime shift enhanced the rain pulse effect on soil respiration in a semi-arid steppe.

PubMed

Yan, Liming; Chen, Shiping; Xia, Jianyang; Luo, Yiqi

2014-01-01

The effect of resource pulses, such as rainfall events, on soil respiration plays an important role in controlling grassland carbon balance, but how shifts in long-term precipitation regime regulate rain pulse effect on soil respiration is still unclear. We first quantified the influence of rainfall event on soil respiration based on a two-year (2006 and 2009) continuously measured soil respiration data set in a temperate steppe in northern China. In 2006 and 2009, soil carbon release induced by rainfall events contributed about 44.5% (83.3 g C m(-2)) and 39.6% (61.7 g C m(-2)) to the growing-season total soil respiration, respectively. The pulse effect of rainfall event on soil respiration can be accurately predicted by a water status index (WSI), which is the product of rainfall event size and the ratio between antecedent soil temperature to moisture at the depth of 10 cm (r2 = 0.92, P<0.001) through the growing season. It indicates the pulse effect can be enhanced by not only larger individual rainfall event, but also higher soil temperature/moisture ratio which is usually associated with longer dry spells. We then analyzed a long-term (1953-2009) precipitation record in the experimental area. We found both the extreme heavy rainfall events (>40 mm per event) and the long dry-spells (>5 days) during the growing seasons increased from 1953-2009. It suggests the shift in precipitation regime has increased the contribution of rain pulse effect to growing-season total soil respiration in this region. These findings highlight the importance of incorporating precipitation regime shift and its impacts on the rain pulse effect into the future predictions of grassland carbon cycle under climate change.

Increased ambient air temperature alters the severity of soil water repellency

NASA Astrophysics Data System (ADS)

van Keulen, Geertje; Sinclair, Kat; Hallin, Ingrid; Doerr, Stefan; Urbanek, Emilia; Quinn, Gerry; Matthews, Peter; Dudley, Ed; Francis, Lewis; Gazze, S. Andrea; Whalley, Richard

2017-04-01

Soil repellency, the inability of soils to wet readily, has detrimental environmental impacts such as increased runoff, erosion and flooding, reduced biomass production, inefficient use of irrigation water and preferential leaching of pollutants. Its impacts may exacerbate (summer) flood risks associated with more extreme drought and precipitation events. In this study we have tested the hypothesis that transitions between hydrophobic and hydrophilic soil particle surface characteristics, in conjunction with soil structural properties, strongly influence the hydrological behaviour of UK soils under current and predicted UK climatic conditions. We have addressed the hypothesis by applying different ambient air temperatures under controlled conditions to simulate the effect of predicted UK climatic conditions on the wettability of soils prone to develop repellency at different severities. Three UK silt-loam soils under permanent vegetation were selected for controlled soil perturbation studies. The soils were chosen based on the severity of hydrophobicity that can be achieved in the field: severe to extreme (Cefn Bryn, Gower, Wales), intermediate to severe (National Botanical Garden, Wales), and subcritical (Park Grass, Rothamsted Research near London). The latter is already highly characterised so was also used as a control. Soils were fully saturated with water and then allowed to dry out gradually upon exposure to controlled laboratory conditions. Soils were allowed to adapt for a few hours to a new temperature prior to initiation of the controlled experiments. Soil wettability was determined at highly regular intervals by measuring water droplet penetration times. Samples were collected at four time points: fully wettable, just prior to and after the critical soil moisture concentrations (CSC), and upon reaching air dryness (to constant weight), for further (ultra)metaproteomic and nanomechanical studies to allow integration of bulk soil characterisations with functional expression and nanoscale studies to generate deep mechanistic understanding of the roles of microbes in soil ecosystems. Our controlled soil pertubation studies have shown that an increase in ambient temperature has consistently affected the severity of soil water repellency. Surprisingly, a higher ambient air temperature impacts soils that in the field develop subcritical and extreme repellency, differently under controlled laboratory conditions. We will discuss the impact of these results in relation to predicted UK climatic conditions. Soil metaproteomics will provide mechanistic insight at the molecular level whether differential microbial adaptation is correlated with the apparent different response to a higher ambient air temperature.

Convection and the Soil-Moisture Precipitation Feedback

NASA Astrophysics Data System (ADS)

Schar, C.; Froidevaux, P.; Keller, M.; Schlemmer, L.; Langhans, W.; Schmidli, J.

2014-12-01

The soil moisture - precipitation (SMP) feedback is of key importance for climate and climate change. A positive SMP feedback tends to amplify the hydrological response to external forcings (and thereby fosters precipitation and drought extremes), while a negative SMP feedback tends to moderate the influence of external forcings (and thereby stabilizes the hydrological cycle). The sign of the SMP feedback is poorly constrained by the current literature. Theoretical, modeling and observational studies partly disagree, and have suggested both negative and positive feedback loops. Can wet soil anomalies indeed result in either an increase or a decrease of precipitation (positive or negative SMP feedback, respectively)? Here we investigate the local SMP feedback using real-case and idealized convection-resolving simulations. An idealized simulation strategy is developed, which is able to replicate both signs of the feedback loop, depending on the environmental parameters. The mechanism relies on horizontal soil moisture variations, which may develop and intensify spontaneously. The positive expression of the feedback is associated with the initiation of convection over dry soil patches, but the convective cells then propagate over wet patches, where they strengthen and preferentially precipitate. The negative feedback may occur when the wind profile is too weak to support the propagation of convective features from dry to wet areas. Precipitation is then generally weaker and falls preferentially over dry patches. The results highlight the role of the mid-tropospheric flow in determining the sign of the feedback. A key element of the positive feedback is the exploitation of both low convective inhibition (CIN) over dry patches (for the initiation of convection), and high CAPE over wet patches (for the generation of precipitation). The results of this study will also be discussed in relation to climate change scenarios that exhibit large biases in surface temperature and interannual variability over mid-latitude summer climates, both over Europe and North America. It is argued that parameterized convection may contribute towards such biases by overemphasizing a positive SMP feedback.

Climate change hampers endangered species through intensified moisture-related plant stresses (Invited)

NASA Astrophysics Data System (ADS)

Bartholomeus, R.; Witte, J.; van Bodegom, P.; Dam, J. V.; Aerts, R.

2010-12-01

With recent climate change, extremes in meteorological conditions are forecast and observed to increase globally, and to affect vegetation composition. More prolonged dry periods will alternate with more intensive rainfall events, both within and between years, which will change soil moisture dynamics. In temperate climates, soil moisture, in concert with nutrient availability and soil acidity, is the most important environmental filter in determining local plant species composition, as it determines the availability of both oxygen and water to plant roots. These resources are indispensable for meeting the physiological demands of plants. The consequences of climate change for our natural environment are among the most pressing issues of our time. The international research community is beginning to realise that climate extremes may be more powerful drivers of vegetation change and species extinctions than slow-and-steady climatic changes, but the causal mechanisms of such changes are presently unknown. The roles of amplitudes in water availability as drivers of vegetation change have been particularly elusive owing to the lack of integration of the key variables involved. Here we show that the combined effect of increased rainfall variability, temperature and atmospheric CO2-concentration will lead to an increased variability in both wet and dry extremes in stresses faced by plants (oxygen and water stress, respectively). We simulated these plant stresses with a novel, process-based approach, incorporating in detail the interacting processes in the soil-plant-atmosphere interface. In order to quantify oxygen and water stress with causal measures, we focused on interacting meteorological, soil physical, microbial, and plant physiological processes in the soil-plant-atmosphere system. As both the supply and demand of oxygen and water depend strongly on the prevailing meteorological conditions, both oxygen and water stress were calculated dynamically in time to capture climate change effects. We demonstrate that increased rainfall variability in interaction with predicted changes in temperature and CO2, affects soil moisture conditions and plant oxygen and water demands such, that both oxygen stress and water stress will intensify due to climate change. Moreover, these stresses will increasingly coincide, causing variable stress conditions. These variable stress conditions were found to decrease future habitat suitability, especially for plant species that are presently endangered. The future existence of such species is thus at risk by climate change, which has direct implications for policies to maintain endangered species, as applied by international nature management organisations (e.g. IUCN). Our integrated mechanistic analysis of two stresses combined, which has never been done so far, reveals large impacts of climate change on species extinctions and thereby on biodiversity.

Growth and death of bacteria and fungi underlie rainfall-induced carbon dioxide pulses from seasonally dried soil.

PubMed

Blazewicz, Steven J; Schwartz, Egbert; Firestone, Mary K

2014-05-01

The rapid increase in microbial activity that occurs when a dry soil is rewetted has been well documented and is of great interest due to implications of changing precipitation patterns on soil C dynamics. Several studies have shown minor net changes in microbial population diversity or abundance following wet-up, but the gross population dynamics of bacteria and fungi resulting from soil wet-up are virtually unknown. Here we applied DNA stable isotope probing with H218O coupled with quantitative PCR to characterize new growth, survival, and mortality of bacteria and fungi following the rewetting of a seasonally dried California annual grassland soil. Microbial activity, as determined by CO2 production, increased significantly within three hours of wet-up, yet new growth was not detected until after three hours, suggesting a pulse of nongrowth activity immediately following wet-up, likely due to osmo-regulation and resuscitation from dormancy in response to the rapid change in water potential. Total microbial abundance revealed little change throughout the seven-day post-wet incubation, but there was substantial turnover of both bacterial and fungal populations (49% and 52%, respectively). New growth was linear between 24 and 168 hours for both bacteria and fungi, with average growth rates of 2.3 x 10(8) bacterial 16S rRNA gene copies x [g dry mass](-1) x h(-1) and 4.3 x 10(7) fungal ITS copies x [g dry mass](-1) x h(-1). While bacteria and fungi differed in their mortality and survival characteristics during the seven-day incubation, mortality that occurred within the first three hours was similar, with 25% and 27% of bacterial and fungal gene copies disappearing from the pre-wet community, respectively. The rapid disappearance of gene copies indicates that cell death, occurring either during the extreme dry down period (preceding five months) or during the rapid change in water potential due to wet-up, generates a significant pool of available C that likely contributes to the large pulse in CO2 associated with wet-up. A dynamic assemblage of growing and dying organisms controlled the CO2 pulse, but the balance between death and growth resulted in relatively stable total population abundances, even after a profound and sudden change in environment.

Influence of soil moisture on sunflower oil extraction of polycyclic aromatic hydrocarbons from a manufactured gas plant soil.

PubMed

Gong, Zongqiang; Wilke, B-M; Alef, Kassem; Li, Peijun

2005-05-01

The influence of soil moisture on efficiency of sunflower oil extraction of polycyclic aromatic hydrocarbons (PAHs) from contaminated soil was investigated. The PAH-contaminated soil was collected from a manufactured gas plant (MGP) site in Berlin, Germany. Half of the soil was air-dried, and the other half was kept as field-moist soil. Batch experiments were performed using air-dried and field-moist soils, and sunflower oil was used as extractant at oil/soil ratios of 2:1 and 1:1 (v/m). The experimental data were fitted to a first-order empirical model to describe mass-transfer profiles of the PAHs. Column extraction experiments were also conducted. Field-moist and air-dried soils in the column were extracted using sunflower oil at an oil/soil ratio of 2:1. In the batch experiments, PAHs were more rapidly extracted from air-dried soil than from field-moist soil. Removal rate of total PAH increased 23% at oil/soil ratio of 1:1 and 15.5% at oil/soil ratio of 2:1 after the soil was air dried. The most favorable conditions for batch extraction were air-dried soil, with an oil/soil ratio of 2:1. In the column experiments, the removal rate of total PAH from air-dried soil was 30.7% higher than that from field-moist soil. For field-moist soil, extraction efficiencies of the batch extraction (67.2% and 81.5%) were better than that for column extraction (65.6%). However, this difference between the two methods became less significant for the air-dried soil, with a total removal rate of 96.3% for column extraction and 90.2% and 97% for batch extractions. A mass-balance test was carried out for analytical quality assurance. The results of both batch and column experiments indicated that drying the soil increased efficiency of extraction of PAHs from the MGP soil.

Investigating the water balance of on-farm techniques for improved crop productivity in rainfed systems: A case study of Makanya catchment, Tanzania

NASA Astrophysics Data System (ADS)

Makurira, H.; Savenije, H. H. G.; Uhlenbrook, S.; Rockström, J.; Senzanje, A.

Water scarcity is a perennial problem in sub-Saharan agricultural systems where extreme rainfall events dominate agricultural seasons. Dry spell occurrences between and during seasons negatively impact on crop yields especially if such dry spells exceed 14 days. The impact of dry spells is felt more at smallholder farming scales where subsistence farming is the only source of livelihood for many households. This paper presents results from on-going research to improve rainfed water productivity in arid and semi-arid regions. The study site is the Makanya catchment in northern Tanzania where rainfall rarely exceeds 400 mm/season. Rainwater alone is not sufficient to support maize which is the preferred crop. The research introduced new soil and water conservation measures to promote water availability into the root zone. The introduced techniques include deep tillage, runoff diversion, fanya juus (infiltration trenches with bunds) and infiltration pits. The research aims at understanding the effectiveness of these interventions in increasing moisture availability within the root zone. Time domain reflectometry (TDR) was used to measure soil moisture twice weekly at 10 cm depth intervals up to depths of 2 m. Soil moisture fluctuated in the range 5-25% of volume with the beginning of the season recording the driest moisture levels and periods after good rainfall/runoff events recording the highest moisture levels. From the field observations made, a spreadsheet model was developed to simulate soil moisture variations during different maize growth stages. The results obtained show that the zones of greatest soil moisture concentrations are those around the trenches and bunds. Soil moisture is least at the centre of the plots. The study confirms the effectiveness of the introduced techniques to help concentrate the little available rainfall into green water flow paths. Indirect benefits from these improved techniques are the creation of fertile and moist zones around the bunds where supplementary food crops (e.g. bananas and cassava) can be grown even in dry seasons.

Response of millet and sorghum to a varying water supply around the primary and nodal roots

PubMed Central

Rostamza, M.; Richards, R. A.; Watt, M.

2013-01-01

Background and Aims Cereals have two root systems. The primary system originates from the embryo when the seed germinates and can support the plant until it produces grain. The nodal system can emerge from stem nodes throughout the plant's life; its value for yield is unclear and depends on the environment. The aim of this study was to test the role of nodal roots of sorghum and millet in plant growth in response to variation in soil moisture. Sorghum and millet were chosen as both are adapted to dry conditions. Methods Sorghum and millet were grown in a split-pot system that allowed the primary and nodal roots to be watered separately. Key Results When primary and nodal roots were watered (12 % soil water content; SWC), millet nodal roots were seven times longer than those of sorghum and six times longer than millet plants in dry treatments, mainly from an 8-fold increase in branch root length. When soil was allowed to dry in both compartments, millet nodal roots responded and grew 20 % longer branch roots than in the well-watered control. Sorghum nodal roots were unchanged. When only primary roots received water, nodal roots of both species emerged and elongated into extremely dry soil (0·6–1·5 % SWC), possibly with phloem-delivered water from the primary roots in the moist inner pot. Nodal roots were thick, short, branchless and vertical, indicating a tropism that was more pronounced in millet. Total nodal root length increased in both species when the dry soil was covered with plastic, suggesting that stubble retention or leaf mulching could facilitate nodal roots reaching deeper moist layers in dry climates. Greater nodal root length in millet than in sorghum was associated with increased shoot biomass, water uptake and water use efficiency (shoot mass per water). Millet had a more plastic response than sorghum to moisture around the nodal roots due to (1) faster growth and progression through ontogeny for earlier nodal root branch length and (2) partitioning to nodal root length from primary roots, independent of shoot size. Conclusions Nodal and primary roots have distinct responses to soil moisture that depend on species. They can be selected independently in a breeding programme to shape root architecture. A rapid rate of plant development and enhanced responsiveness to local moisture may be traits that favour nodal roots and water use efficiency at no cost to shoot growth. PMID:23749473

Response of millet and sorghum to a varying water supply around the primary and nodal roots.

PubMed

Rostamza, M; Richards, R A; Watt, M

2013-07-01

Cereals have two root systems. The primary system originates from the embryo when the seed germinates and can support the plant until it produces grain. The nodal system can emerge from stem nodes throughout the plant's life; its value for yield is unclear and depends on the environment. The aim of this study was to test the role of nodal roots of sorghum and millet in plant growth in response to variation in soil moisture. Sorghum and millet were chosen as both are adapted to dry conditions. Sorghum and millet were grown in a split-pot system that allowed the primary and nodal roots to be watered separately. When primary and nodal roots were watered (12 % soil water content; SWC), millet nodal roots were seven times longer than those of sorghum and six times longer than millet plants in dry treatments, mainly from an 8-fold increase in branch root length. When soil was allowed to dry in both compartments, millet nodal roots responded and grew 20 % longer branch roots than in the well-watered control. Sorghum nodal roots were unchanged. When only primary roots received water, nodal roots of both species emerged and elongated into extremely dry soil (0.6-1.5 % SWC), possibly with phloem-delivered water from the primary roots in the moist inner pot. Nodal roots were thick, short, branchless and vertical, indicating a tropism that was more pronounced in millet. Total nodal root length increased in both species when the dry soil was covered with plastic, suggesting that stubble retention or leaf mulching could facilitate nodal roots reaching deeper moist layers in dry climates. Greater nodal root length in millet than in sorghum was associated with increased shoot biomass, water uptake and water use efficiency (shoot mass per water). Millet had a more plastic response than sorghum to moisture around the nodal roots due to (1) faster growth and progression through ontogeny for earlier nodal root branch length and (2) partitioning to nodal root length from primary roots, independent of shoot size. Nodal and primary roots have distinct responses to soil moisture that depend on species. They can be selected independently in a breeding programme to shape root architecture. A rapid rate of plant development and enhanced responsiveness to local moisture may be traits that favour nodal roots and water use efficiency at no cost to shoot growth.

Xeropreservation of Functionalized Lipid Biomarkers in Hyperarid Soils in the Atacama Desert

NASA Technical Reports Server (NTRS)

Wilhelm, Mary Beth; Davila, Alfonso F.; Eigenbrode, Jennifer L.; Parenteau, Mary N.; Jahnke, Linda L.; Liu, Xiao-Lei; Summons, Roger E.; Wray, James J.; Stamos, Brian N.; O'Reilly, Shane S.;

SMOS brightness temperature assimilation into the Community Land Model

NASA Astrophysics Data System (ADS)

Rains, Dominik; Han, Xujun; Lievens, Hans; Montzka, Carsten; Verhoest, Niko E. C.

2017-11-01

SMOS (Soil Moisture and Ocean Salinity mission) brightness temperatures at a single incident angle are assimilated into the Community Land Model (CLM) across Australia to improve soil moisture simulations. Therefore, the data assimilation system DasPy is coupled to the local ensemble transform Kalman filter (LETKF) as well as to the Community Microwave Emission Model (CMEM). Brightness temperature climatologies are precomputed to enable the assimilation of brightness temperature anomalies, making use of 6 years of SMOS data (2010-2015). Mean correlation R with in situ measurements increases moderately from 0.61 to 0.68 (11 %) for upper soil layers if the root zone is included in the updates. A reduced improvement of 5 % is achieved if the assimilation is restricted to the upper soil layers. Root-zone simulations improve by 7 % when updating both the top layers and root zone, and by 4 % when only updating the top layers. Mean increments and increment standard deviations are compared for the experiments. The long-term assimilation impact is analysed by looking at a set of quantiles computed for soil moisture at each grid cell. Within hydrological monitoring systems, extreme dry or wet conditions are often defined via their relative occurrence, adding great importance to assimilation-induced quantile changes. Although still being limited now, longer L-band radiometer time series will become available and make model output improved by assimilating such data that are more usable for extreme event statistics.

Microbiology and Moisture Uptake of Desert Soils

NASA Astrophysics Data System (ADS)

Kress, M. E.; Bryant, E. P.; Morgan, S. W.; Rech, S.; McKay, C. P.

2005-12-01

We have initiated an interdisciplinary study of the microbiology and water content of desert soils to better understand microbial activity in extreme arid environments. Water is the one constituent that no organism can live without; nevertheless, there are places on Earth with an annual rainfall near zero that do support microbial ecosystems. These hyperarid deserts (e.g. Atacama and the Antarctic Dry Valleys) are the closest terrestrial analogs to Mars, which is the subject of future exploration motivated by the search for life beyond Earth. We are modeling the moisture uptake by soils in hyperarid environments to quantify the environmental constraints that regulate the survival and growth of micro-organisms. Together with the studies of moisture uptake, we are also characterizing the microbial population in these soils using molecular and culturing methods. We are in the process of extracting DNA from these soils using MoBio extraction kits. This DNA will be used as a template to amplify bacterial and eukaryotic ribosomal DNA to determine the diversity of the microbial population. We also have been attempting to determine the density of organisms by culturing on one-half strength R2A agar. The long-range goal of this research is to identify special adaptations of terrestrial life that allow them to inhabit extreme arid environments, while simultaneously quantifying the environmental parameters that enforce limits on these organisms' growth and survival.

The Hyperarid Core of the Atacama Desert, an Extremely Dry and Carbon Deprived Habitat of Potential Interest for the Field of Carbon Science.

PubMed

Azua-Bustos, Armando; González-Silva, Carlos; Corsini, Gino

2017-01-01

The Atacama Desert in Chile is the driest and oldest desert on Earth, also considered one of the best Mars analog models. Here, several heterotrophic microbial communities have been discovered in its driest regions, with the ones present in the soil subsurface being one of the most interesting due to its existence in a habitat with almost no water available and almost undetectable organic carbon sources. Our recent discovery of the driest site of the Atacama known to date (and the heterotrophic microbial species that are able to survive in this site) reaffirms the opportunity to better characterize the physiological and molecular mechanisms that these species use to detect, mobilize, incorporate and use carbon under these extremely harsh conditions. Here we summarize what has been reported up to date on the organic carbon concentrations in different sites of the hyperarid core of the Atacama Desert, proposing that due to the meager amounts of carbon and extremely dry conditions, the microbial communities of the hyperarid core of the Atacama Desert may be of interest for the field of carbon science.

Analysis of the drought recovery of Andosols on southern Ecuadorian Andean páramos

NASA Astrophysics Data System (ADS)

Iñiguez, Vicente; Morales, Oscar; Cisneros, Felipe; Bauwens, Willy; Wyseure, Guido

2016-06-01

The Neotropical Andean grasslands above 3500 m a.s.l., known as páramo, offer remarkable ecological services for the Andean region. The most important of these is the water supply of excellent quality to many cities and villages in the inter-Andean valleys and along the coast. The páramo ecosystem and especially its soils are under constant and increased threat by human activities and climate change. In this study, the recovery speed of the páramo soils after drought periods are analysed. The observation period includes the droughts of 2009, 2010, 2011, and 2012 together with intermediate wet periods. Two experimental catchments - one with and one without páramo - were investigated. The Probability Distributed Moisture (PDM) model was calibrated and validated in both catchments. Drought periods and its characteristics were identified and quantified by a threshold level approach and complemented by means of a drought propagation analysis. At the plot scale in the páramo region, the soil water content measured by time domain reflectometry (TDR) probes dropped from a normal value of about 0.84 to ˜ 0.60 cm3 cm-3, while the recovery time was 2-3 months. This did not occur at lower altitudes (Cumbe) where the soils are mineral. Although the soil moisture depletion observed in these soils was similar to that of the Andosols (27 %), decreasing from a normal value of about 0.54 to ˜ 0.39 cm3 cm-3, the recovery was much slower and took about 8 months for the drought in 2010. At the catchment scale, however, the soil water storage simulated by the PDM model and the drought analysis was not as pronounced. Soil moisture droughts occurred mainly in the dry season in both catchments. The deficit for all cases is small and progressively reduced during the wet season. Vegetation stress periods correspond mainly to the months of September, October and November, which coincides with the dry season. The maximum number of consecutive dry days were reached during the drought of 2009 and 2010 (19 and 22 days), which can be considered to be a long period in the páramo. The main factor in the hydrological response of these experimental catchments is the precipitation relative to the potential evapotranspiration. As the soils never became extremely dry nor close to the wilting point, the soil water storage capacity had a secondary influence.

Growth of streptomycetes in soil and their impact on bioremediation.

PubMed

Schütze, Eileen; Klose, Michael; Merten, Dirk; Nietzsche, Sandor; Senftleben, Dominik; Roth, Martin; Kothe, Erika

2014-02-28

The impact of the extremely heavy metal resistant actinomycete Streptomyces mirabilis P16B-1 on heavy metal mobilization/stabilization, phytoremediation and stress level of plants was analyzed in the presence and absence of Sorghum bicolor in sterile microcosms containing highly metal contaminated or control soil. For control, a metal sensitive S. lividans TK24 was used. The metal contents with respect to the mobile and specifically adsorbed fractions of the contaminated soil were considerably decreased by addition of both, living and dead biomass of the strains, with the heavy metal resistant S. mirabilis P16B-1 showing considerably higher impact. Both strains could grow in control soil, while only S. mirabilis P16B-1 formed new tip growth in the metal contaminated soil. A plant growth promoting effect was visible for S. mirabilis P16B-1 in contaminated soil enhancing the dry weight of inoculated Sorghum plants. Thus, metal resistant strains like S. mirabilis P16B-1 are able to enhance phytoremediation of heavy metal contaminated soils. Copyright © 2013 Elsevier B.V. All rights reserved.

Controls on surface soil drying rates observed by SMAP and simulated by the Noah land surface model

NASA Astrophysics Data System (ADS)

Shellito, Peter J.; Small, Eric E.; Livneh, Ben

2018-03-01

Drydown periods that follow precipitation events provide an opportunity to assess controls on soil evaporation on a continental scale. We use SMAP (Soil Moisture Active Passive) observations and Noah simulations from drydown periods to quantify the role of soil moisture, potential evaporation, vegetation cover, and soil texture on soil drying rates. Rates are determined using finite differences over intervals of 1 to 3 days. In the Noah model, the drying rates are a good approximation of direct soil evaporation rates, and our work suggests that SMAP-observed drying is also predominantly affected by direct soil evaporation. Data cover the domain of the North American Land Data Assimilation System Phase 2 and span the first 1.8 years of SMAP's operation. Drying of surface soil moisture observed by SMAP is faster than that simulated by Noah. SMAP drying is fastest when surface soil moisture levels are high, potential evaporation is high, and when vegetation cover is low. Soil texture plays a minor role in SMAP drying rates. Noah simulations show similar responses to soil moisture and potential evaporation, but vegetation has a minimal effect and soil texture has a much larger effect compared to SMAP. When drying rates are normalized by potential evaporation, SMAP observations and Noah simulations both show that increases in vegetation cover lead to decreases in evaporative efficiency from the surface soil. However, the magnitude of this effect simulated by Noah is much weaker than that determined from SMAP observations.

Effect of soil type and moisture availability on the foraging behavior of the Formosan subterranean termite (Isoptera: Rhinotermitidae).

PubMed

Cornelius, Mary L; Osbrink, Weste L A

2010-06-01

This study examined the influence of soil type and moisture availability on termite foraging behavior. Physical properties of the soil affected both tunneling behavior and shelter tube construction. Termites tunneled through sand faster than top soil and clay. In containers with top soil and clay, termites built shelter tubes on the sides of the containers. In containers with sand, termites built shelter tubes directly into the air and covered the sides of the container with a layer of sand. The interaction of soil type and moisture availability affected termite movement, feeding, and survival. In assays with moist soils, termites were more likely to aggregate in top soil over potting soil and peat moss. However, termites were more likely to move into containers with dry peat moss and potting soil than containers with dry sand and clay. Termites were also significantly more likely to move into containers with dry potting soil than dry top soil. In the assay with dry soils, termite mortality was high even though termites were able to travel freely between moist sand and dry soil, possibly due to desiccation caused by contact with dry soil. Evaporation from potting soil and peat moss resulted in significant mortality, whereas termites were able to retain enough moisture in top soil, sand, and clay to survive for 25 d. The interaction of soil type and moisture availability influences the distribution of foraging termites in microhabitats.

Highly specialized microbial diversity in hyper-arid polar desert

PubMed Central

Pointing, Stephen B.; Chan, Yuki; Lacap, Donnabella C.; Lau, Maggie C. Y.; Jurgens, Joel A.; Farrell, Roberta L.

2009-01-01

The McMurdo Dry Valleys in Antarctica are a cold hyperarid polar desert that present extreme challenges to life. Here, we report a culture-independent survey of multidomain microbial biodiversity in McKelvey Valley, a pristine example of the coldest desert on Earth. We demonstrate that life has adapted to form highly-specialized communities in distinct lithic niches occurring concomitantly within this terrain. Endoliths and chasmoliths in sandstone displayed greatest diversity, whereas soil was relatively depauperate and lacked a significant photoautotrophic component, apart from isolated islands of hypolithic cyanobacterial colonization on quartz rocks in soil contact. Communities supported previously unreported polar bacteria and fungi, but archaea were absent from all niches. Lithic community structure did not vary significantly on a landscape scale and stochastic moisture input due to snowmelt resulted in increases in colonization frequency without significantly affecting diversity. The findings show that biodiversity near the cold-arid limit for life is more complex than previously appreciated, but communities lack variability probably due to the high selective pressures of this extreme environment. PMID:19850879

Soil moisture and soil temperature variability among three plant communities in a High Arctic Lake Basin

NASA Astrophysics Data System (ADS)

Davis, M. L.; Konkel, J.; Welker, J. M.; Schaeffer, S. M.

2017-12-01

Soil moisture and soil temperature are critical to plant community distribution and soil carbon cycle processes in High Arctic tundra. As environmental drivers of soil biochemical processes, the predictability of soil moisture and soil temperature by vegetation zone in High Arctic landscapes has significant implications for the use of satellite imagery and vegetation distribution maps to estimate of soil gas flux rates. During the 2017 growing season, we monitored soil moisture and soil temperature weekly at 48 sites in dry tundra, moist tundra, and wet grassland vegetation zones in a High Arctic lake basin. Soil temperature in all three communities reflected fluctuations in air temperature throughout the season. Mean soil temperature was highest in the dry tundra community at 10.5±0.6ºC, however, did not differ between moist tundra and wet grassland communities (2.7±0.6 and 3.1±0.5ºC, respectively). Mean volumetric soil moisture differed significantly among all three plant communities with the lowest and highest soil moisture measured in the dry tundra and wet grassland (30±1.2 and 65±2.7%), respectively. For all three communities, soil moisture was highest during the early season snow melt. Soil moisture in wet grassland remained high with no significant change throughout the season, while significant drying occurred in dry tundra. The most significant change in soil moisture was measured in moist tundra, ranging from 61 to 35%. Our results show different gradients in soil moisture variability within each plant community where: 1) soil moisture was lowest in dry tundra with little change, 2) highest in wet grassland with negligible change, and 3) variable in moist tundra which slowly dried but remained moist. Consistently high soil moisture in wet grassland restricts this plant community to areas with no significant drying during summer. The moist tundra occupies the intermediary areas between wet grassland and dry tundra and experiences the widest range of soil moisture variability. As climate projections predict wetter summers in the High Arctic, expansion of areas with seasonally inundated soils and increased soil moisture variability could result in an expansion of wet grassland and moist tundra communities with a commensurate decrease in dry tundra area.

Is leaf dry matter content a better predictor of soil fertility than specific leaf area?

PubMed Central

Hodgson, J. G.; Montserrat-Martí, G.; Charles, M.; Jones, G.; Wilson, P.; Shipley, B.; Sharafi, M.; Cerabolini, B. E. L.; Cornelissen, J. H. C.; Band, S. R.; Bogard, A.; Castro-Díez, P.; Guerrero-Campo, J.; Palmer, C.; Pérez-Rontomé, M. C.; Carter, G.; Hynd, A.; Romo-Díez, A.; de Torres Espuny, L.; Royo Pla, F.

2011-01-01

Background and Aims Specific leaf area (SLA), a key element of the ‘worldwide leaf economics spectrum’, is the preferred ‘soft’ plant trait for assessing soil fertility. SLA is a function of leaf dry matter content (LDMC) and leaf thickness (LT). The first, LDMC, defines leaf construction costs and can be used instead of SLA. However, LT identifies shade at its lowest extreme and succulence at its highest, and is not related to soil fertility. Why then is SLA more frequently used as a predictor of soil fertility than LDMC? Methods SLA, LDMC and LT were measured and leaf density (LD) estimated for almost 2000 species, and the capacity of LD to predict LDMC was examined, as was the relative contribution of LDMC and LT to the expression of SLA. Subsequently, the relationships between SLA, LDMC and LT with respect to soil fertility and shade were described. Key Results Although LD is strongly related to LDMC, and LDMC and LT each contribute equally to the expression of SLA, the exact relationships differ between ecological groupings. LDMC predicts leaf nitrogen content and soil fertility but, because LT primarily varies with light intensity, SLA increases in response to both increased shade and increased fertility. Conclusions Gradients of soil fertility are frequently also gradients of biomass accumulation with reduced irradiance lower in the canopy. Therefore, SLA, which includes both fertility and shade components, may often discriminate better between communities or treatments than LDMC. However, LDMC should always be the preferred trait for assessing gradients of soil fertility uncoupled from shade. Nevertheless, because leaves multitask, individual leaf traits do not necessarily exhibit exact functional equivalence between species. In consequence, rather than using a single stand-alone predictor, multivariate analyses using several leaf traits is recommended. PMID:21948627

Risk element immobilization/stabilization potential of fungal-transformed dry olive residue and arbuscular mycorrhizal fungi application in contaminated soils.

PubMed

García-Sánchez, Mercedes; Stejskalová, Tereza; García-Romera, Inmaculada; Száková, Jiřina; Tlustoš, Pavel

2017-10-01

The use of biotransformed dry olive residue (DOR) as organic soil amendment has recently been proposed due to its high contents of stabilized organic matter and nutrients. The potential of biotransformed DOR to immobilize risk elements in contaminated soils might qualify DOR as a potential risk element stabilization agent for in situ soil reclamation practices. In this experiment, the mobility of risk elements in response to Penicillium chrysogenum-10-transformed DOR, Funalia floccosa-transformed DOR, Bjerkandera adusta-transformed DOR, and Chondrostereum purpureum-transformed DOR as well as arbuscular mycorrhizal fungi (AMF), Funneliformis mosseae, inoculation was investigated. We evaluated the effect of these treatments on risk element uptake by wheat (Triticum aestivum L.) plants in a pot experiment with Cd, Pb, and Zn contaminated soil. The results showed a significant impact of the combined treatment (biotransformed DOR and AMF inoculation) on wheat plant growth and element mobility. The mobile proportions of elements in the treated soils were related to soil pH; with increasing pH levels, Cd, Cu, Fe, Mn, P, Pb, and Zn mobility decreased significantly (r values between -0.36 and -0.46), while Ca and Mg mobility increased (r = 0.63, and r = 0.51, respectively). The application of biotransformed DOR decreased risk element levels (Cd, Zn), and nutrient concentrations (Ca, Cu, Fe, Mg, Mn) in the aboveground biomass, where the elements were retained in the roots. Thus, biotransformed DOR in combination with AMF resulted in a higher capacity of wheat plants to grow under detrimental conditions, being able to accumulate high amounts of risk elements in the roots. However, risk element reduction was insufficient for safe crop production in the extremely contaminated soil. Copyright © 2017 Elsevier Ltd. All rights reserved.

Seasonal variations measured by TDR and GPR on an anthropogenic sandy soil and the implications for utility detection

NASA Astrophysics Data System (ADS)

Curioni, Giulio; Chapman, David N.; Metje, Nicole

2017-06-01

The electromagnetic (EM) soil properties are dynamic variables that can change considerably over time, and they fundamentally affect the performance of Ground Penetrating Radar (GPR). However, long-term field studies are remarkably rare and records of the EM soil properties and their seasonal variation are largely absent from the literature. This research explores the extent of the seasonal variation of the apparent permittivity (Ka) and bulk electrical conductivity (BEC) measured by Time Domain Reflectometry (TDR) and their impact on GPR results, with a particularly important application to utility detection. A bespoke TDR field monitoring station was specifically developed and installed in an anthropogenic sandy soil in the UK for 22 months. The relationship between the temporal variation of the EM soil properties and GPR performance has been qualitatively assessed, highlighting notably degradation of the GPR images during wet periods and a few days after significant rainfall events following dry periods. Significantly, it was shown that by assuming arbitrary average values (i.e. not extreme values) of Ka and BEC which do not often reflect the typical conditions of the soil, it can lead to significant inaccuracies in the estimation of the depth of buried targets, with errors potentially up to approximately 30% even over a depth of 0.50 m (where GPR is expected to be most accurate). It is therefore recommended to measure or assess the soil conditions during GPR surveys, and if this is not possible to use typical wet and dry Ka values reported in the literature for the soil expected at the site, to improve confidence in estimations of target depths.

Is leaf dry matter content a better predictor of soil fertility than specific leaf area?

PubMed

Hodgson, J G; Montserrat-Martí, G; Charles, M; Jones, G; Wilson, P; Shipley, B; Sharafi, M; Cerabolini, B E L; Cornelissen, J H C; Band, S R; Bogard, A; Castro-Díez, P; Guerrero-Campo, J; Palmer, C; Pérez-Rontomé, M C; Carter, G; Hynd, A; Romo-Díez, A; de Torres Espuny, L; Royo Pla, F

2011-11-01

Specific leaf area (SLA), a key element of the 'worldwide leaf economics spectrum', is the preferred 'soft' plant trait for assessing soil fertility. SLA is a function of leaf dry matter content (LDMC) and leaf thickness (LT). The first, LDMC, defines leaf construction costs and can be used instead of SLA. However, LT identifies shade at its lowest extreme and succulence at its highest, and is not related to soil fertility. Why then is SLA more frequently used as a predictor of soil fertility than LDMC? SLA, LDMC and LT were measured and leaf density (LD) estimated for almost 2000 species, and the capacity of LD to predict LDMC was examined, as was the relative contribution of LDMC and LT to the expression of SLA. Subsequently, the relationships between SLA, LDMC and LT with respect to soil fertility and shade were described. Although LD is strongly related to LDMC, and LDMC and LT each contribute equally to the expression of SLA, the exact relationships differ between ecological groupings. LDMC predicts leaf nitrogen content and soil fertility but, because LT primarily varies with light intensity, SLA increases in response to both increased shade and increased fertility. Gradients of soil fertility are frequently also gradients of biomass accumulation with reduced irradiance lower in the canopy. Therefore, SLA, which includes both fertility and shade components, may often discriminate better between communities or treatments than LDMC. However, LDMC should always be the preferred trait for assessing gradients of soil fertility uncoupled from shade. Nevertheless, because leaves multitask, individual leaf traits do not necessarily exhibit exact functional equivalence between species. In consequence, rather than using a single stand-alone predictor, multivariate analyses using several leaf traits is recommended.

Research on the Effects of Drying Temperature on Nitrogen Detection of Different Soil Types by Near Infrared Sensors.

PubMed

Nie, Pengcheng; Dong, Tao; He, Yong; Xiao, Shupei

2018-01-29

Soil is a complicated system whose components and mechanisms are complex and difficult to be fully excavated and comprehended. Nitrogen is the key parameter supporting plant growth and development, and is the material basis of plant growth as well. An accurate grasp of soil nitrogen information is the premise of scientific fertilization in precision agriculture, where near infrared sensors are widely used for rapid detection of nutrients in soil. However, soil texture, soil moisture content and drying temperature all affect soil nitrogen detection using near infrared sensors. In order to investigate the effects of drying temperature on the nitrogen detection in black soil, loess and calcium soil, three kinds of soils were detected by near infrared sensors after 25 °C placement (ambient temperature), 50 °C drying (medium temperature), 80 °C drying (medium-high temperature) and 95 °C drying (high temperature). The successive projections algorithm based on multiple linear regression (SPA-MLR), partial least squares (PLS) and competitive adaptive reweighted squares (CARS) were used to model and analyze the spectral information of different soil types. The predictive abilities were assessed using the prediction correlation coefficients (R P ), the root mean squared error of prediction (RMSEP), and the residual predictive deviation (RPD). The results showed that the loess (R P = 0.9721, RMSEP = 0.067 g/kg, RPD = 4.34) and calcium soil (R P = 0.9588, RMSEP = 0.094 g/kg, RPD = 3.89) obtained the best prediction accuracy after 95 °C drying. The detection results of black soil (R P = 0.9486, RMSEP = 0.22 g/kg, RPD = 2.82) after 80 °C drying were the optimum. In conclusion, drying temperature does have an obvious influence on the detection of soil nitrogen by near infrared sensors, and the suitable drying temperature for different soil types was of great significance in enhancing the detection accuracy.

Soil Microbial Responses to Increased Moisture and Organic Resources along a Salinity Gradient in a Polar Desert

PubMed Central

Van Horn, David J.; Okie, Jordan G.; Buelow, Heather N.; Gooseff, Michael N.; Barrett, John E.

2014-01-01

Microbial communities in extreme environments often have low diversity and specialized physiologies suggesting a limited resistance to change. The McMurdo Dry Valleys (MDV) are a microbially dominated, extreme ecosystem currently undergoing climate change-induced disturbances, including the melting of massive buried ice, cutting through of permafrost by streams, and warming events. These processes are increasing moisture across the landscape, altering conditions for soil communities by mobilizing nutrients and salts and stimulating autotrophic carbon inputs to soils. The goal of this study was to determine the effects of resource addition (water/organic matter) on the composition and function of microbial communities in the MDV along a natural salinity gradient representing an additional gradient of stress in an already extreme environment. Soil respiration and the activity of carbon-acquiring extracellular enzymes increased significantly (P < 0.05) with the addition of resources at the low- and moderate-salinity sites but not the high-salinity site. The bacterial community composition was altered, with an increase in Proteobacteria and Firmicutes with water and organic matter additions at the low- and moderate-salinity sites and a near dominance of Firmicutes at the high-salinity site. Principal coordinate analyses of all samples using a phylogenetically informed distance matrix (UniFrac) demonstrated discrete clustering among sites (analysis of similarity [ANOSIM], P < 0.05 and R > 0.40) and among most treatments within sites. The results from this experimental work suggest that microbial communities in this environment will undergo rapid change in response to the altered resources resulting from climate change impacts occurring in this region. PMID:24610850

Soil microbial responses to increased moisture and organic resources along a salinity gradient in a polar desert.

PubMed

Van Horn, David J; Okie, Jordan G; Buelow, Heather N; Gooseff, Michael N; Barrett, John E; Takacs-Vesbach, Cristina D

2014-05-01

Microbial communities in extreme environments often have low diversity and specialized physiologies suggesting a limited resistance to change. The McMurdo Dry Valleys (MDV) are a microbially dominated, extreme ecosystem currently undergoing climate change-induced disturbances, including the melting of massive buried ice, cutting through of permafrost by streams, and warming events. These processes are increasing moisture across the landscape, altering conditions for soil communities by mobilizing nutrients and salts and stimulating autotrophic carbon inputs to soils. The goal of this study was to determine the effects of resource addition (water/organic matter) on the composition and function of microbial communities in the MDV along a natural salinity gradient representing an additional gradient of stress in an already extreme environment. Soil respiration and the activity of carbon-acquiring extracellular enzymes increased significantly (P < 0.05) with the addition of resources at the low- and moderate-salinity sites but not the high-salinity site. The bacterial community composition was altered, with an increase in Proteobacteria and Firmicutes with water and organic matter additions at the low- and moderate-salinity sites and a near dominance of Firmicutes at the high-salinity site. Principal coordinate analyses of all samples using a phylogenetically informed distance matrix (UniFrac) demonstrated discrete clustering among sites (analysis of similarity [ANOSIM], P < 0.05 and R > 0.40) and among most treatments within sites. The results from this experimental work suggest that microbial communities in this environment will undergo rapid change in response to the altered resources resulting from climate change impacts occurring in this region.

Glyphosate and aminomethylphosphonic acid chronic risk assessment for soil biota.

PubMed

von Mérey, Georg; Manson, Philip S; Mehrsheikh, Akbar; Sutton, Peter; Levine, Steven L

2016-11-01

Glyphosate is a broad-spectrum herbicide used widely in agriculture, horticulture, private gardens, and public infrastructure, where it is applied to areas such as roadsides, railway tracks, and parks to control the growth of weeds. The exposure risk from glyphosate and the primary soil metabolite aminomethylphosphonic acid (AMPA) on representative species of earthworms, springtails, and predatory soil mites and the effects on nitrogen-transformation processes by soil microorganisms were assessed under laboratory conditions based on internationally recognized guidelines. For earthworms, the reproductive no-observed-effect concentration (NOEC) was 472.8 mg glyphosate acid equivalent (a.e.)/kg dry soil, which was the highest concentration tested, and 198.1 mg/kg dry soil for AMPA. For predatory mites, the reproductive NOEC was 472.8 mg a.e./kg dry soil for glyphosate and 320 mg/kg dry soil for AMPA, the highest concentrations tested. For springtails, the reproductive NOEC was 472.8 mg a.e./kg dry soil for glyphosate and 315 mg/kg dry soil for AMPA, the highest concentrations tested. Soil nitrogen-transformation processes were unaffected by glyphosate and AMPA at 33.1 mg a.e./kg soil and 160 mg/kg soil, respectively. Comparison of these endpoints with worst-case soil concentrations expected for glyphosate (6.62 mg a.e./kg dry soil) and AMPA (6.18 mg/kg dry soil) for annual applications at the highest annual rate of 4.32 kg a.e./ha indicate very low likelihood of adverse effects on soil biota. Environ Toxicol Chem 2016;35:2742-2752. © 2016 The Authors. Environmental Toxicology and Chemistry Published by Wiley Periodicals, Inc. on behalf of SETAC. © 2016 The Authors. Environmental Toxicology and Chemistry Published by Wiley Periodicals, Inc. on behalf of SETAC.

Experimental and model analysis of evapotranspiration and percolation losses in present and future rainfall scenarios in seasonally dry tropics

NASA Astrophysics Data System (ADS)

Lima, J. D.; Gondim, P. S.; Silva, R. A.; Gomes, C. A.; Souza, E. S.; Vico, G.; Soares, W. A.; Feng, X.; Montenegro, S. M.; Antonino, A. C.; Porporato, A.

2013-12-01

Evapotranspiration losses with their link to the surface energy balance are a major determinant of the ecohydrological conditions of vegetation, especially in semi-arid ecosystems and crops. Grassland ecosystems account for approximately 32% of global natural vegetation, and cover 170 million ha in Brazil, with 2.5 million ha in the Pernambuco State of the semiarid-NE Brazil. The water balance (WB) and Bowen ratio - energy balance (EB) methods were used in conjunction to lysimeters and eddy covariance methods to come up with reliable estimates for water fluxes in the conditions of extreme seasonal and interannual variability of NE Brazil. The SiSPAT (Simple Soil-Plant-Atmosphere Transfer Model) model was also used to help quantify the seasonal and diurnal variations in energy and water vapour exchanges over grasslands. The ET estimates were obtained with WB and EB methods during the wet and dry season in a grassland in NE Brazil, using a rain gauge, a pyranometer, a net radiometer and sensors for measuring air temperature and relative humidity at two levels, as well as automated sensors for measuring soil water content at depths of 0.10, 0.20, 0.30 and 0.40 m. During the dry period, the low stored soil water limited the grass production and LAI, and as a consequence most of the net radiation (62%) was consumed in sensible heat flux (H) compared to during the wet period (52%). In both seasons, the water flow in the lower limit of soil (z = 0.30 m) occurred only in the downward direction, losing 23.68 mm by drainage in wet period and only 0.19 mm in dry period. The best results for evapotranspiration were obtained with the EB method and the SiSPAT model. These results were then used to estimate the hydrologic partitioning in future climatic conditions where seasonal and interannual rainfall variability is predicted to increase.

Evaluation of the Ability of S2S and NMME Models to Predict Heat Waves Following Drought Events in the United States

NASA Astrophysics Data System (ADS)

Ford, T.; Dirmeyer, P.

2016-12-01

The influence of antecedent drought conditions on the onset of heat waves in North America is important as the establishment of past heat wave events has been connected to both advection of warm, dry air and limitation of local moisture recycling due to dry soils. The strong connection between the land surface and subsequent extreme heat offers promise that realistic soil moisture initialization could improve model forecast skill. However, there is still a lack of consensus about the (1) the role of antecedent drought conditions in forcing heat waves over North America and (2) the ability of numerical forecast models to predict extreme heat events at sub-seasonal to seasonal time scales. For this project, we use atmospheric reanalysis datasets to establish the connection between drought and subsequent extreme heat events. The Standardized Precipitation Index (SPI), computed over 30-, 60-, and 90-day intervals, is used to identify drought events, while the excess heat factor defines subsequent heat wave events. We focus on heat waves immediately following drought periods, including events coinciding with but not beginning prior to the start of drought, as well as heat wave events beginning no more than 3 days after the demise of a drought event. Hindcasts from individual model ensemble members of the Sub-seasonal to Seasonal Prediction (S2S) Project and the Phase II of the North American Multi-Model Ensemble (NMME) are assessed with regard to heat wave prediction. Each individual S2S and NMME ensemble member is evaluated to determine if their respective hindcasts are able to capture/predict heat wave events identified in the reanalysis products.

Development and survival of Anopheles gambiae eggs in drying soil: influence of the rate of drying, egg age, and soil type.

PubMed

Shililu, J I; Grueber, W B; Mbogo, C M; Githure, J I; Riddiford, L M; Beier, J C

2004-09-01

Little is known about the contribution made by the egg stage of African malaria vectors to the rapid rise in adult populations following the onset of seasonal rains. To examine this issue, we evaluated the viability of Anopheles gambiae eggs in drying soil in the laboratory. Survival data were collected from field-caught mosquitoes kept in sandy loam soil and laboratory-reared colonies kept in sandy loam soil and black cotton soil. Under high, medium, and low soil-moisture regimes, egg viability declined sharply with increased duration of drying. Eggs remained viable in drying sandy loam soil for 1, 5, and 10 days, but not after 15 or 20 days. The most dramatic decline in hatching success occurred between drying days 1 (78-83% hatch) and 5 (20-23% hatch). In contrast, eggs reared in high-moisture black cotton soil remained viable for up to 15 days. Furthermore, after 5 drying days, high-, medium-, and low-moisture soils averaged 59, 47, and 31% hatching success, respectively. We recovered unhatched eggs from sandy loam soils to examine the developmental status of the embryos. A majority of the unhatched eggs that were recovered from days 15 and 20 in sandy loam soils contained fully developed late-stage embryos. Thus, unhatched eggs completed embryonic development but probably died before receiving an appropriate hatching stimulus. Our results suggest that the absolute moisture content of the soil does not alone determine hatching success of anopheline eggs. Rather, soil moisture, together with the rate of drying, physiological factors associated with the age of the egg, and the type of soil in which the egg rests likely influence survival.

SMAP soil moisture drying more rapid than observed in situ following rainfall events

USDA-ARS?s Scientific Manuscript database

We examine soil drying rates by comparing observations from the NASA Soil Moisture Active Passive (SMAP) mission to surface soil moisture from in situ probes during drydown periods at SMAP validation sites. SMAP and in situ probes record different soil drying dynamics after rainfall. We modeled this...

Nitrogen supply modulates the effect of changes in drying-rewetting frequency on soil C and N cycling and greenhouse gas exchange.

PubMed

Morillas, Lourdes; Durán, Jorge; Rodríguez, Alexandra; Roales, Javier; Gallardo, Antonio; Lovett, Gary M; Groffman, Peter M

2015-10-01

Climate change and atmospheric nitrogen (N) deposition are two of the most important global change drivers. However, the interactions of these drivers have not been well studied. We aimed to assess how the combined effect of soil N additions and more frequent soil drying-rewetting events affects carbon (C) and N cycling, soil:atmosphere greenhouse gas (GHG) exchange, and functional microbial diversity. We manipulated the frequency of soil drying-rewetting events in soils from ambient and N-treated plots in a temperate forest and calculated the Orwin & Wardle Resistance index to compare the response of the different treatments. Increases in drying-rewetting cycles led to reductions in soil NO3- levels, potential net nitrification rate, and soil : atmosphere GHG exchange, and increases in NH4+ and total soil inorganic N levels. N-treated soils were more resistant to changes in the frequency of drying-rewetting cycles, and this resistance was stronger for C- than for N-related variables. Both the long-term N addition and the drying-rewetting treatment altered the functionality of the soil microbial population and its functional diversity. Our results suggest that increasing the frequency of drying-rewetting cycles can affect the ability of soil to cycle C and N and soil : atmosphere GHG exchange and that the response to this increase is modulated by soil N enrichment. © 2015 John Wiley & Sons Ltd.

Effects of Air Drying on Soil Available Phosphorus in Two Grassland Soils

NASA Astrophysics Data System (ADS)

Schaerer, M.; Frossard, E.; Sinaj, S.

2003-04-01

Mobilization of P from the soil to ground and surface water is principally determined by the amount of P in the soil and physico-chemical as well as biological processes determining the available P-pool that is in equilibrium with soil solution. Soil available P is commonly estimated on air dry soil using a variety of methods (extraction with water, dilute acids and bases, anion exchange resin, isotopic exchange or infinite sinks). Recently, attempts have been made to use these measurements to define the potential for transport of P from soil to water by overland flow or subsurface flow. The effect of air drying on soil properties in general, and plant nutrient status in particular, have been subject of a number of studies. The main objective of this paper was to evaluate the effect of air-drying on soil properties and available P. For this experiment, grassland soils were sampled on two study sites located on slopes in the watershed of Lake Greifensee, 25 km south-east of Zurich. Both soils (0-4 cm depth) are rich in P with 1.7 and 1.3 g kg-1 total P at site I and site II, respectively. The concentrations on isotopically exchangeable P within 1 minute (E1min, readily available P) for the same depth were also very high, 58 and 27 mg P kg soil-1 for the site I and II, respectively. In the present study both field moist and air dried soil samples were analyzed for microbial P (Pmic), resin extractable P (P_r), isotopically exchangeable P (E1min) and amorphous Al and Fe (Alox, Feox). Generally, the microbial P in field moist soils reached values up to 120 mg P/kg soil, whereas after drying they decreased by 73% in average for both soils. On the contrary to Pmic, available P estimated by different methods strongly increased after drying of the soil samples. The concentration of phosphate ions in the soil solution c_p, E1min and P_r were 4.2, 2.2 and 2 times higher in dry soils than in field moist soils. The increase in available P shows significant semilogarithmic correlations with the decrease in microbial P (r^2 = 0.66, r^2 = 0.53 and r^2 = 0.75 respectively for c_p, E(1 min) and resin P). The parameter R_0/r1min from the isotopic exchange approach, which is well correlated with the soil P fixing capacity, generally decreased after drying. Drying of the soil significantly modifies soil properties that control P availability, such as amorphous Fe- and Al-oxides. The amount of Feox and Alox was decreased by 3 and 6% respectively. It can be concluded that drying of the soils leads a strong increase in available P as estimated by different methods. The observed available P increase is mainly related to a modification of both soil chemistry and biology. Especially for grassland soils with a high organic matter content and microbial biomass, available P measurements on dry soil seem to overestimate the available P mainly due to a release of microbial P.

Responses of seminal wheat seedling roots to soil water deficits.

PubMed

Trejo, Carlos; Else, Mark A; Atkinson, Christopher J

2018-04-01

The aims of this paper are to develop our understanding of the ways by which soil water deficits influence early wheat root growth responses, particularly how seminal roots respond to soil drying and the extent to which information on differences in soil water content are conveyed to the shoot and their impact on shoot behaviour. To achieve this, wheat seedlings have been grown, individually for around 25 days after germination in segmented soil columns within vertical plastic compartments. Roots were exposed to different soil volumetric moisture contents (SVMC) within the two compartments. Experiments where the soil in the lower compartment was allowed to dry to different extents, while the upper was maintained close to field capacity, showed that wheat seedlings allocated proportionally more root dry matter to the lower drier soil compartment. The total production of root, irrespective of the upper or lower SVMC, was similar and there were no detected effects on leaf growth rate or gas exchange. The response of seminal roots to proportionally increase their allocation of dry matter, to the drier soil was unexpected with such plasticity of roots system development traditionally linked to heterogeneous nutrient distribution than accessing soil water. In experiments where the upper soil compartment was allowed to dry, root growth slowed and leaf growth and gas exchange declined. Subsequent experiments used root growth rates to determine when seminal root tips first came into contact with drying soil, with the intentions of determining how the observed root growth rates were maintained as an explanation for the observed changes in root allocation. Measurements of seminal root ABA and ethylene from roots within the drying soil are interpreted with respect to what is known about the physiological control of root growth in drying soil. Copyright © 2018 Elsevier GmbH. All rights reserved.

Compost and sulfur affect the mobilization and phyto-availability of Cd and Ni to sorghum and barnyard grass in a spiked fluvial soil.

PubMed

Shaheen, Sabry M; Balbaa, Ali A; Khatab, Alaa M; Rinklebe, Jörg

2017-12-01

Soil reclamation via additives can cause contradictory effects on the mobilization of toxic elements in soils under dry and wet conditions. Therefore, our aim was to investigate the impact of compost and sulfur in two rates (1.25 and 2.5%) on fractionation, mobilization, and phyto-availability of cadmium (Cd) and nickel (Ni) to sorghum (dry soil) and barnyard grass (wet soil) in a fluvial soil spiked with 25 mg Cd or 200 mg Ni/kg soil. Compost decreased the solubility and mobilization of Cd (especially in dry soil) and Ni (in both soils). Sulfur increased the solubility of Cd (31% in dry soil-49% in wet soil) and Ni (4.6% in wet soil-8.7% in dry soil). Sulfur altered the carbonate fraction of Cd to the soluble fraction and the residual fraction of Cd and Ni to the non-residual fraction. Compost decreased Cd and increased Ni in sorghum, but enhanced Cd and degraded Ni in grass. Sulfur increased Cd and Ni in both plants, and the increasing rate of Cd was higher in grass than in sorghum, while Ni was higher in sorghum than in grass. These results suggest that compost can be used as an immobilizing agent for Cd in the dry soil and Ni in the wet soil; however, it might be used as mobilizing agent for Cd in the wet soil and Ni in the dry soil. Sulfur (with rate 2.5%) can be used for enhancing the phyto-extraction of Cd and Ni (especially Cd) from contaminated alkaline soils.

Dry heat effects on survival of indigenous soil particle microflora and particle viability studies of Kennedy Space Center soil

NASA Technical Reports Server (NTRS)

Ruschmeyer, O. R.; Pflug, I. J.; Gove, R.; Heisserer, Y.

1975-01-01

Research efforts were concentrated on attempts to obtain data concerning the dry heat resistance of particle microflora in Kennedy Space Center soil samples. The in situ dry heat resistance profiles at selected temperatures for the aggregate microflora on soil particles of certain size ranges were determined. Viability profiles of older soil samples were compared with more recently stored soil samples. The effect of increased particle numbers on viability profiles after dry heat treatment was investigated. These soil particle viability data for various temperatures and times provide information on the soil microflora response to heat treatment and are useful in making selections for spacecraft sterilization cycles.

Effects of drying-wetting and freezing-thawing cycle on leachability of metallic elements in mine soils

NASA Astrophysics Data System (ADS)

Bang, H.; Kim, J.; Hyun, S.

2016-12-01

Mine leachate derived from contaminated mine sites with metallic elements can pose serious risks on human society and environment. Only labile fraction of metallic elements in mine soils is subject to leaching and movement by rainfall. Lability of metallic element in soil is a function of bond strengths between metal and soil surfaces, which is influenced by environmental condition (e.g., rainfall intensity, duration, temperature, etc.) The purpose of this study was to elucidate the effects of various climate conditions on the leaching patterns and lability of metallic elements in mine soils. To do this, two mine soils were sampled from two abandoned mine sites located in Korea. Leaching test were conducted using batch decant-refill method. Various climatic conditions were employed in leaching test such as (1) oven drying (40oC) - wetting cycles, (2) air drying (20oC) - wetting cycle, and (3) freezing (-40oC) - thawing cycles. Duration of drying and freezing were varied from 4 days to 2 weeks. Concentration of metallic elements, pH, Eh and concentration of dissolved iron and sulfate in leachate from each leaching process was measured. To identify the changes of labile fraction in mine soils after each of drying or freezing period, sequential extraction procedure (five fraction) was used to compare labile fraction (i.e., F1 + F2) of metallic elements. The concentration of metallic elements in mine leachate was increased after drying and freezing procedure. The amounts of released metallic element from mine soils was changed depending on their drying or freezing period. In addition, labile fraction of metallic elements in soil was also changed after drying and freezing. The changes in labile fraction after drying and freezing might be due to the increased soil surface area by pore water volume expansion. Further study is therefore needed to evaluate the impact of altered physical properties of soils such as hydration of soil surface area and shrinking by drying and freezing cycles.

Soil Moisture Extremes Observed by METOP ASCAT: Was 2012 an Exceptional Year?

NASA Astrophysics Data System (ADS)

Wagner, Wolfgang; Paulik, Christoph; Hahn, Sebastian; Melzer, Thomas; Parinussa, Robert; de Jeu, Richard; Dorigo, Wouter; Chung, Daniel; Enenkel, Markus

2013-04-01

In summer 2012 the international press reported widely about the severe drought that had befallen large parts of the United States. Yet, the US drought was only one of several major droughts that occurred in 2012: Southeastern Europe, Central Asia, Brazil, India, Southern Australia and several other regions suffered from similarly dry soil conditions. This raises the question whether 2012 was an exceptionally dry year? In this presentation we will address this question by analyzing global soil moisture patterns as observed by the Advanced Scatterometer (ASCAT) flown on board of the METOP-A satellite. We firstly compare the 2012 ASCAT soil moisture data to all available ASCAT measurements acquired by the instrument since the launch of METOP-A in November 2006. Secondly, we compare the 2012 data to a long-term soil moisture data set derived by merging the ASCAT soil moisture data with other active and passive microwave soil moisture retrievals as described by Liu et al. (2012) and Wagner et al. (2012) (see also http://www.esa-soilmoisture-cci.org/). A first trend analysis of the latter long-term soil moisture data set carried out by Dorigo et al. (2012) has revealed that over the period 1988-2010 significant trends were observed over 27 % of the area covered by the data set, of which 73 % were negative (soil drying) and only 27 % were positive (soil wetting). In this presentation we will show how the inclusion of the years 2011 and 2012 affects the areal extent and strengths of these significant trends. REFERENCES Dorigo, W., R. de Jeu, D. Chung, R. Parinussa, Y. Liu, W. Wagner, D. Fernández-Prieto (2012) Evaluating global trends (1988-2010) in harmonized multi-satellite surface soil moisture, Geophysical Research Letters, 39, L18405, 1-7. Liu, Y.Y., W.A. Dorigo, R.M. Parinussa, R.A.M. de Jeu, W. Wagner, M.F. McCabe, J.P. Evans, A.I.J.M. van Dijk (2012) Trend-preserving blending of passive and active microwave soil moisture retrievals, Remote Sensing of Environment, 123, 280-297. Wagner, W., W. Dorigo, R. de Jeu, D. Fernandez, J. Benveniste, E. Haas, M. Ertl (2012) Fusion of active and passive microwave observations to create an Essential Climate Variable data record on soil moisture, ISPRS Annals of the Photogrammetry, Remote Sensing and Spatial Information Sciences (ISPRS Annals), Volume I-7, XXII ISPRS Congress, Melbourne, Australia, 25 August-1 September 2012, 315-321.

Soil methane oxidation in both dry and wet temperate eucalypt forests shows a near-identical relationship with soil air-filled porosity

NASA Astrophysics Data System (ADS)

Fest, Benedikt J.; Hinko-Najera, Nina; Wardlaw, Tim; Griffith, David W. T.; Livesley, Stephen J.; Arndt, Stefan K.

2017-01-01

Well-drained, aerated soils are important sinks for atmospheric methane (CH4) via the process of CH4 oxidation by methane-oxidising bacteria (MOB). This terrestrial CH4 sink may contribute towards climate change mitigation, but the impact of changing soil moisture and temperature regimes on CH4 uptake is not well understood in all ecosystems. Soils in temperate forest ecosystems are the greatest terrestrial CH4 sink globally. Under predicted climate change scenarios, temperate eucalypt forests in south-eastern Australia are predicted to experience rapid and extreme changes in rainfall patterns, temperatures and wild fires. To investigate the influence of environmental drivers on seasonal and inter-annual variation of soil-atmosphere CH4 exchange, we measured soil-atmosphere CH4 exchange at high-temporal resolution (< 2 h) in a dry temperate eucalypt forest in Victoria (Wombat State Forest, precipitation 870 mm yr-1) and in a wet temperature eucalypt forest in Tasmania (Warra Long-Term Ecological Research site, 1700 mm yr-1). Both forest soil systems were continuous CH4 sinks of -1.79 kg CH4 ha-1 yr-1 in Victoria and -3.83 kg CH4 ha-1 yr-1 in Tasmania. Soil CH4 uptake showed substantial temporal variation and was strongly controlled by soil moisture at both forest sites. Soil CH4 uptake increased when soil moisture decreased and this relationship explained up to 90 % of the temporal variability. Furthermore, the relationship between soil moisture and soil CH4 flux was near-identical at both forest sites when soil moisture was expressed as soil air-filled porosity (AFP). Soil temperature only had a minor influence on soil CH4 uptake. Soil nitrogen concentrations were generally low and fluctuations in nitrogen availability did not influence soil CH4 uptake at either forest site. Our data suggest that soil MOB activity in the two forests was similar and that differences in soil CH4 exchange between the two forests were related to differences in soil moisture and thereby soil gas diffusivity. The differences between forest sites and the variation in soil CH4 exchange over time could be explained by soil AFP as an indicator of soil moisture status.

Can differences in root responses to soil drying and compaction explain differences in performance of trees growing on landfill sites?

PubMed

Liang, Jiansheng; Zhang, Jianhua; Chan, Gilbert Y. S.; Wong, M. H.

1999-07-01

Two tropical woody species, Acacia confusa Merrill and Litsea glutinosa (Lour.) C.B. Robinson, were grown under controlled conditions in PVC pipes filled with John Innes No. 2 soil. To investigate root distribution, physiological characteristics and hydraulic conductivity, four soil treatments were imposed-well-watered and noncompacted (control), well-watered and compacted; unwatered and noncompacted, and unwatered and compacted. In L. glutinosa, rooting depth and root elongation were severely restricted when soil bulk density increased from around 1.12 to 1.62 g cm(-3), whereas soil compaction had little effect on these parameters in A. confusa. As soil drying progressed, root water potential and osmotic potential declined more slowly in L. glutinosa than in A. confusa. Both the soil drying and compaction treatments significantly stimulated the accumulation of root abscisic acid (ABA) in both species. Soil drying damaged the root cell membrane of A. confusa, but had little influence on the root cell membrane of L. glutinosa. Soil drying had a greater effect on root hydraulic conductivity (L(p)) in L. glutinosa than in A. confusa, whereas the effect of soil compaction on L(p) was less in L. glutinosa than in A. confusa. Soil drying enhanced the effects of soil compaction on root L(p). We conclude that soil drying and compaction have large species-specific effects on the distribution, growth and physiology of roots. The relationships of these root properties to the species' ability to tolerate unfavorable soil conditions were examined.

Tunneling behavior of the formosan subterranean termite (isoptera: rhinotermitadae) in dry soil

USDA-ARS?s Scientific Manuscript database

This study examines the effect of dry soil on tunnel construction by the Formosan subterranean termite, Cptotermes formosanus. Termites did not construct tunnels in dry soil in any of the treatments. Termites only constructed tunnels in moist areas in treatments where the soil was partially moistene...

EXTRACTION METHODS FOR RECOVERY OF VOLATILE ORGANIC COMPOUNDS FROM FORTIFIED DRY SOILS

EPA Science Inventory

Recovery of 8 volatile organic compounds (VOCs) from dry soils, each fortified at 800 ng/g soil, was studied in relation to the extraction method and time of extraction. Extraction procedures studied on desiccator-dried soils were modifications of EPA low-and high-level purge-and...

Dry Acid Deposition and Accumulation on the Surface of Mars and in the Atacama Desert, Chile

NASA Technical Reports Server (NTRS)

Quinn, R. C.; Zent, A. P.; Ehrenfruend, P.; Taylor, C. L.; McKay, C. P.; Garry, J. R. C.

2005-01-01

It has been discovered recently that soils from certain regions of the Chilean Atacama Desert have some characteristics that are similar to the surface materials tested by the Viking Landers. Navarro-Gonzalez et al. demonstrated that the quantity and diversity of heterotrophic bacteria increase as a function of local water availability in the Atacama, and that for some soil samples collected in the driest regions, no culturable bacteria could be isolated. Additionally, Navarro-Gonzalez et al. reported that pyrolysis-GCMS analysis of soils collected from these regions revealed extremely low levels of organic matter. Although the mechanism resulting in the low level of organics in these regions was not established by Navarro-Gonzalez, the condition of organic-depleted, near-sterile soil offers an interesting Earth analog of the martian surface material, as the Viking Gas Exchange (GEx) experiment and Labeled Release (LR) experiment were unable to demonstrate the presence of culturable bacteria, and the Viking pyrolysis- GCMS was unable to detect organic compounds.

Solubility of aluminum and silica in Spodic horizons as affected by drying and freezing

DOE Office of Scientific and Technical Information (OSTI.GOV)

Simonsson, M.; Berggren, D.; Gustafsson, J.P.

The release of toxic Al{sup 3+} is one of the most serious consequences of anthropogenic soil acidification. Therefore, the mechanisms controlling Al solubility have been a topic of intense research for more than a decade. For convenience, soil samples are often dried before storage and experimental use. However, the literature offers examples of drying that results in changes in pH, solubility of organic matter, and dissolution rates of Al. In this study, the authors examined the solubility of Al and Si in fresh soil and in soil that had been dried or deep-frozen. Five Spodosol B horizon soils were subjectedmore » to batch titrations, where portions of each soil were equilibrated with solutions with varying concentrations of acid or base added. Extractions with acid oxalate and Na pyrophosphate indicated the presence of imogolite-type materials (ITM) in three of the soils. In the other two soils most secondary solid-phase Al was associated with humic substances. Deep-freezing did not significantly change pH nor the concentration of Al or Si as compared with fresh soil. Drying, on the other hand, yielded pH increases of up to 0.3 units at a given addition of acid or base, whereas Al{sup 3+} changed only slightly, implying a higher Al solubility in all of the soils. Furthermore, dissolved silica increased by up to 200% after drying, except in a soil that almost completely lacked oxalate-extractable Si. The authors suggest that drying enhanced the dissolution of ITM by disrupting soil organic matter, thus exposing formerly coated mineral surfaces. In the soil where dissolved Si did not change with drying, it has been demonstrated that Al-humus complexes controlled Al solubility. They suggest that fissures in the organic material caused by drying may have exposed formerly occluded binding sites that had a higher Al saturation than had sites at the surface of humus particles.« less

[Diversity of arbuscular mycorrhizal fungi in special habitats: a review].

PubMed

Li, Su-Mei; Wang, Yin-Qiao; Liu, Run-Jin

2013-11-01

Arbuscular mycorrhizal fungi (AMF) are one of the important components in ecosystems, which not only have the diversity in genetics, species composition, and function, but also have the diversity in distribution and habitat. AMF infect plant root, form mycorrhiza, and nourish as obligate biotroph symbiont, with strong ecological adaptability. They not only distribute in forest, prairie, and farm land, but also distribute in the special habitats with less plant species diversity, such as commercial greenhouse soil, saline-alkali soil, mining pollution land, petroleum-contaminated land, pesticide-polluted soil, desert, dry land, wetland, marsh, plateau, volcanic, cooler, and arctic tundra, composing a unique community structure and playing an important irreplaceable role in the physiological and ecological functions. This paper summarized the species diversity and mycorrhizal morphological features of AMF in special habitats, aimed to provide essential information for the further studies on the AMF in these special habitats and extreme environments.

Aerosolization of cyanobacterial cells across ecosystem boundaries in the McMurdo Dry Valleys, Antarctica

NASA Astrophysics Data System (ADS)

Trout-Haney, J.; Heindel, R. C.; Virginia, R. A.

2017-12-01

Cyanobacteria play a major ecological role in polar freshwaters, occurring predominately as small single cells in the water column, i.e., picocyanobacteria, or large multicellular colonies and mats that reside on the lake bottom. Cyanobacteria are also present in terrestrial polar habitats, including within soils, soil crusts, rocks, and glacial ice. Despite their predominance in polar ecosystems, the extent to which cyanobacteria move between terrestrial and aquatic landscape units remains poorly understood. In polar deserts such as the McMurdo Dry Valleys, aeolian processes influence terrestrial landscape morphology and drive the transport of sediments and other particles. Water surfaces can also act as a source of aerosolized particles, such as the production of sea spray aerosols through wave breaking in marine environments. However, aerosolization from freshwater bodies has been far less studied, especially in polar regions. We conducted a field-study to examine the transport of aerosolized cyanobacterial cells from ponds and soils in the McMurdo Dry Valleys. We used highly portable aerosol collection devices fitted with GF/F filters combusted at 500°C (0.3 µm) to collect small particles, such as picocyanobacteria (0.2 - 2 µm), from near-shore water and adjacent soil. We used epifluorescence microscopy to quantify aerosolized cells, with excitation filters for chlorophyll a (435 nm) and phycobilin pigments (572 nm), to distinguish cyanobacterial cells. We detected aerosolized picocyanobacterial cells from all ponds and soils sampled, indicating that these cells may be quite mobile and transported across ecosystem boundaries. We observed cyanobacterial cells individually, clustered, and associated with other organic material, suggesting multiple modes of cell transport. Further, we investigated the potential for aerosolization of toxin-producing cyanobacterial taxa (or unbound cyanotoxins), and the ecological and ecosystem-scale implications of aerosolization on cyanobacterial transport, cyanotoxin exposure, and nutrient cycling. Our results highlight the role of aerosolization in transporting cyanobacterial cells and suggest that even in extreme polar deserts, biological connectivity exists between aquatic and terrestrial habitats.

Altered nutrition during hot droughts will impair forest functions in the future

NASA Astrophysics Data System (ADS)

Grossiord, C.; Gessler, A.; Reed, S.; Dickman, L. T.; Collins, A.; Schönbeck, L.; Sevanto, S.; Vilagrosa, A.; McDowell, N. G.

2017-12-01

Rising greenhouse gas emissions will increase atmospheric temperature globally and alter hydrological cycles resulting in more extreme and recurrent droughts in the coming century. Nutrition is a key component affecting the vulnerability of forests to extreme climate. Models typically assume that global warming will enhance nitrogen cycling in terrestrial ecosystems and lead to improved plant functions. Drought on the other hand is expected to weaken the same processes, leading to a clear conflict and inability to predict how nutrition and plant functions will be impacted by a simultaneously warming and drying climate. We used a unique setup consisting of long-term manipulation of climate on mature trees to examine how individual vs. combined warming and drought would alter soil N cycling and tree functions. The site consists of the longest record of tree responses to experimental warming and precipitation reduction in natural conditions.Changes in soil nitrogen cycling (e.g. microbial activity, nitrification and ammonification rates, N concentration) occurred in response to the treatments. In addition, temperature rise and precipitation reduction altered the ability of trees to take up nitrogen and modified nitrogen allocation patterns between aboveground and belowground compartments. Although no additive effect of warming and drying were found for the two studied species, contrasting responses to warming and droughts were observed between the two functional types. Overall, our results show that higher temperature and reduced precipitation will alter the nutrition of forest ecosystems in the future with potentially large consequences for forest functions, structure and biodiversity.

Soil drying procedure affects the DNA quantification of Lactarius vinosus but does not change the fungal community composition.

PubMed

Castaño, Carles; Parladé, Javier; Pera, Joan; Martínez de Aragón, Juan; Alday, Josu G; Bonet, José Antonio

2016-11-01

Drying soil samples before DNA extraction is commonly used for specific fungal DNA quantification and metabarcoding studies, but the impact of different drying procedures on both the specific fungal DNA quantity and the fungal community composition has not been analyzed. We tested three different drying procedures (freeze-drying, oven-drying, and room temperature) on 12 different soil samples to determine (a) the soil mycelium biomass of the ectomycorrhizal species Lactarius vinosus using qPCR with a specifically designed TaqMan® probe and (b) the fungal community composition and diversity using the PacBio® RS II sequencing platform. Mycelium biomass of L. vinosus was significantly greater in the freeze-dried soil samples than in samples dried at oven and room temperature. However, drying procedures had no effect on fungal community composition or on fungal diversity. In addition, there were no significant differences in the proportions of fungi according to their functional roles (moulds vs. mycorrhizal species) in response to drying procedures. Only six out of 1139 operational taxonomic units (OTUs) had increased their relative proportions after soil drying at room temperature, with five of these OTUs classified as mould or yeast species. However, the magnitude of these changes was small, with an overall increase in relative abundance of these OTUs of approximately 2 %. These results suggest that DNA degradation may occur especially after drying soil samples at room temperature, but affecting equally nearly all fungi and therefore causing no significant differences in diversity and community composition. Despite the minimal effects caused by the drying procedures at the fungal community composition, freeze-drying resulted in higher concentrations of L. vinosus DNA and prevented potential colonization from opportunistic species.

Decomposition of polychlorinated biphenyls in soil with a dispersion mixture of metallic calcium and calcium oxide.

PubMed

Mitoma, Yoshiharu; Mallampati, Srinivasa Reddy; Miyata, Hideaki; Kakeda, Mitsunori

2013-02-01

This study describes the decomposition of polychlorinated biphenyls (PCBs) in soil with dispersion mixtures of metallic calcium (Ca) and calcium oxide (CaO) at different temperatures. In these experiments, naturally moisturized and contaminated soil (1.0 g [31 ppm PCBs]), CaO (dried 2.0 wt%), and metallic Ca (0.01 g [0.25 mmol]) were introduced into a stainless steel pressure reactor under 0.1 MPa N(2) gas. The mixtures were stirred magnetically and heated at 260, 280, and 300 °C, respectively. Soil treatment with metallic Ca and CaO under various temperature conditions is extremely effective for degrading existing PCBs. Decomposition resulted from dechlorination (DC). Initial moisture in soil acted as a hydrogen source during stirring. Soil moisture can be beneficial for hydrodechlorination in the presence of metallic Ca and CaO. Furthermore, metallic Ca and CaO can greatly increase the number of collisions and mutual refinement. Treatment at 260, 280, and 300 °C combined with metallic Ca and CaO is effective for the decomposition (approximately 95 % DC) of PCBs in soil under natural moisture conditions.

Colloid Mobilization in a Fractured Soil during Dry-Wet Cycles: Role of Drying Duration and Flow Path Permeability.

PubMed

Mohanty, Sanjay K; Saiers, James E; Ryan, Joseph N

2015-08-04

In subsurface soils, colloids are mobilized by infiltrating rainwater, but the source of colloids and the process by which colloids are generated between rainfalls are not clear. We examined the effect of drying duration and the spatial variation of soil permeability on the mobilization of in situ colloids in intact soil cores (fractured and heavily weathered saprolite) during dry-wet cycles. Measuring water flux at multiple sampling ports at the core base, we found that water drained through flow paths of different permeability. The duration of antecedent drying cycles affected the amount of mobilized colloids, particularly in high-flux ports that received water from soil regions with a large number of macro- and mesopores. In these ports, the amount of mobilized colloids increased with increased drying duration up to 2.5 days. For drying durations greater than 2.5 days, the amount of mobilized colloids decreased. In contrast, increasing drying duration had a limited effect on colloid mobilization in low-flux ports, which presumably received water from soil regions with fewer macro- and mesopores. On the basis of these results, we attribute this dependence of colloid mobilization upon drying duration to colloid generation from dry pore walls and distribution of colloids in flow paths, which appear to be sensitive to the moisture content of soil after drying and flow path permeability. The results are useful for improving the understanding of colloid mobilization during fluctuating weather conditions.

Instrumentation and Methodology Development for Mars Mission

NASA Technical Reports Server (NTRS)

Chen, Yuan-Liang Albert

2002-01-01

The Mars environment comprises a dry, cold and low air pressure atmosphere with low gravity (0.38g) and high resistivity soil. The global dust storms that cover a large portion of Mars were observed often from Earth. This environment provides an idea condition for triboelectric charging. The extremely dry conditions on the Martian surface have raised concerns that electrostatic charge buildup will not be dissipated easily. If triboelectrically generated charge cannot be dissipated or avoided, then dust will accumulate on charged surfaces and electrostatic discharge may cause hazards for future exploration missions. The low surface temperature on Mars helps to prolong the charge decay on the dust particles and soil. To better understand the physics of Martian charged dust particles is essential to future Mars missions. We research and design two sensors, velocity/charge sensor and PZT momentum sensors, to detect the velocity distribution, charge distribution and mass distribution of Martian charged dust particles. These sensors are fabricated at NASA Kenney Space Center, Electromagnetic Physics Testbed. The sensors will be tested and calibrated for simulated Mars atmosphere condition with JSC MARS-1 Martian Regolith simulant in this NASA laboratory.

Anatomy of extraordinary rainfall and flash flood in a Dutch lowland catchment

NASA Astrophysics Data System (ADS)

Brauer, C. C.; Teuling, A. J.; Overeem, A.; van der Velde, Y.; Hazenberg, P.; Warmerdam, P. M. M.; Uijlenhoet, R.

2011-06-01

On 26 August 2010 the eastern part of The Netherlands and the bordering part of Germany were struck by a series of rainfall events lasting for more than a day. Over an area of 740 km2 more than 120 mm of rainfall were observed in 24 h. This extreme event resulted in local flooding of city centres, highways and agricultural fields, and considerable financial loss. In this paper we report on the unprecedented flash flood triggered by this exceptionally heavy rainfall event in the 6.5 km2 Hupsel Brook catchment, which has been the experimental watershed employed by Wageningen University since the 1960s. This study aims to improve our understanding of the dynamics of such lowland flash floods. We present a detailed hydrometeorological analysis of this extreme event, focusing on its synoptic meteorological characteristics, its space-time rainfall dynamics as observed with rain gauges, weather radar and a microwave link, as well as the measured soil moisture, groundwater and discharge response of the catchment. At the Hupsel Brook catchment 160 mm of rainfall was observed in 24 h, corresponding to an estimated return period of well over 1000 years. As a result, discharge at the catchment outlet increased from 4.4 × 10-3 to nearly 5 m3 s-1. Within 7 h discharge rose from 5 × 10-2 to 4.5 m3 s-1. The catchment response can be divided into four phases: (1) soil moisture reservoir filling, (2) groundwater response, (3) surface depression filling and surface runoff and (4) backwater feedback. The first 35 mm of rainfall were stored in the soil without a significant increase in discharge. Relatively dry initial conditions (in comparison to those for past discharge extremes) prevented an even faster and more extreme hydrological response.

Climate change hampers endangered species through intensified moisture-related plant stresses

NASA Astrophysics Data System (ADS)

(Ruud) Bartholomeus, R. P.; (Flip) Witte, J. P. M.; (Peter) van Bodegom, P. M.; (Jos) van Dam, J. C.; (Rien) Aerts, R.

2010-05-01

With recent climate change, extremes in meteorological conditions are forecast and observed to increase globally, and to affect vegetation composition. More prolonged dry periods will alternate with more intensive rainfall events, both within and between years, which will change soil moisture dynamics. In temperate climates, soil moisture, in concert with nutrient availability and soil acidity, is the most important environmental filter in determining local plant species composition, as it determines the availability of both oxygen and water to plant roots. These resources are indispensable for meeting the physiological demands of plants. The consequences of climate change for our natural environment are among the most pressing issues of our time. The international research community is beginning to realise that climate extremes may be more powerful drivers of vegetation change and species extinctions than slow-and-steady climatic changes, but the causal mechanisms of such changes are presently unknown. The roles of amplitudes in water availability as drivers of vegetation change have been particularly elusive owing to the lack of integration of the key variables involved. Here we show that the combined effect of increased rainfall variability, temperature and atmospheric CO2-concentration will lead to an increased variability in both wet and dry extremes in stresses faced by plants (oxygen and water stress, respectively). We simulated these plant stresses with a novel, process-based approach, incorporating in detail the interacting processes in the soil-plant-atmosphere interface. In order to quantify oxygen and water stress with causal measures, we focused on interacting meteorological, soil physical, microbial, and plant physiological processes in the soil-plant-atmosphere system. The first physiological process inhibited at high soil moisture contents is plant root respiration, i.e. oxygen consumption in the roots, which responds to increased temperatures. High soil moisture contents hamper oxygen transport from the atmosphere, through the soil - where part of the oxygen additionally disappears by soil microbial oxygen consumption - and to the root cells. Reduced respiration negatively affects the energy supply to plant metabolism. Plant transpiration, which responds to increased temperatures and atmospheric CO2-concentrations, is the first physiological process that will be inhibited by low soil moisture contents, negatively affecting both photosynthesis and cooling. As both the supply and demand of oxygen and water depend strongly on the prevailing meteorological conditions, both oxygen and water stress were calculated dynamically in time to capture climate change effects. We demonstrate that increased rainfall variability in interaction with predicted changes in temperature and CO2, affects soil moisture conditions and plant oxygen and water demands such, that both oxygen stress and water stress will intensify due to climate change. Moreover, these stresses will increasingly coincide, causing variable stress conditions. These variable stress conditions were found to decrease future habitat suitability, especially for plant species that are presently endangered. The future existence of such species is thus at risk by climate change, which has direct implications for policies to maintain endangered species, as applied by international nature management organisations (e.g. IUCN). Our integrated mechanistic analysis of two stresses combined, which has never been done so far, reveals large impacts of climate change on species extinctions and thereby on biodiversity.

Hunting for cultivable Micromonospora strains in soils of the Atacama Desert.

PubMed

Carro, Lorena; Razmilic, Valeria; Nouioui, Imen; Richardson, Lee; Pan, Che; Golinska, Patrycja; Asenjo, Juan A; Bull, Alan T; Klenk, Hans-Peter; Goodfellow, Michael

2018-02-26

Innovative procedures were used to selectively isolate small numbers of Micromonospora strains from extreme hyper-arid and high altitude Atacama Desert soils. Micromonosporae were recognised on isolation plates by their ability to produce filamentous microcolonies that were strongly attached to the agar. Most of the isolates formed characteristic orange colonies that lacked aerial hyphae and turned black on spore formation, whereas those from the high altitude soil were dry, blue-green and covered by white aerial hyphae. The isolates were assigned to seven multi- and eleven single-membered groups based on BOX-PCR profiles. Representatives of the groups were assigned to either multi-membered clades that also contained marker strains or formed distinct phyletic lines in the Micromonospora 16S rRNA gene tree; many of the isolates were considered to be putatively novel species of Micromonospora. Most of the isolates from the high altitude soils showed activity against wild type strains of Bacillus subtilis and Pseudomonas fluorescens while those from the rhizosphere of Parastrephia quadrangulares and from the Lomas Bayas hyper-arid soil showed resistance to UV radiation.

Pore-scale water dynamics during drying and the impacts of structure and surface wettability

NASA Astrophysics Data System (ADS)

Cruz, Brian C.; Furrer, Jessica M.; Guo, Yi-Syuan; Dougherty, Daniel; Hinestroza, Hector F.; Hernandez, Jhoan S.; Gage, Daniel J.; Cho, Yong Ku; Shor, Leslie M.

2017-07-01

Plants and microbes secrete mucilage into soil during dry conditions, which can alter soil structure and increase contact angle. Structured soils exhibit a broad pore size distribution with many small and many large pores, and strong capillary forces in narrow pores can retain moisture in soil aggregates. Meanwhile, contact angle determines the water repellency of soils, which can result in suppressed evaporation rates. Although they are often studied independently, both structure and contact angle influence water movement, distribution, and retention in soils. Here drying experiments were conducted using soil micromodels patterned to emulate different aggregation states of a sandy loam soil. Micromodels were treated to exhibit contact angles representative of those in bulk soil (8.4° ± 1.9°) and the rhizosphere (65° ± 9.2°). Drying was simulated using a lattice Boltzmann single-component, multiphase model. In our experiments, micromodels with higher contact angle surfaces took 4 times longer to completely dry versus micromodels with lower contact angle surfaces. Microstructure influenced drying rate as a function of saturation and controlled the spatial distribution of moisture within micromodels. Lattice Boltzmann simulations accurately predicted pore-scale moisture retention patterns within micromodels with different structures and contact angles.

Impact of repeated dry-wet cycles on soil greenhouse gas emissions, extracellular enzyme activity and nutrient cycling in a temperate forest

NASA Astrophysics Data System (ADS)

Leitner, Sonja; Zimmermann, Michael; Bockholt, Jan; Schartner, Markus; Brugner, Paul; Holtermann, Christian; Zechmeister-Boltenstern, Sophie

2014-05-01

Climate change research predicts that both frequency and intensity of weather extremes such as long drought periods and heavy rainfall events will increase in mid Europe over the next decades. Soil moisture is one of the major factors controlling microbial soil processes, and it has been widely agreed that feedback effects between altered precipitation and changed soil fluxes of the greenhouse gases CO2, CH4 and N2O could intensify climate change. In a field experiment in an Austrian beech forest, we established a precipitation manipulation experiment, which will be conducted for 3 years. We use roofs to exclude rainfall from reaching the forest soil and simulate drought periods, and a sprinkler system to simulate heavy rainfall events. We applied repeated dry-wet cycles in two intensities: one treatment received 6 cycles of 1 month drought followed by 75mm irrigation within 2 hours, and a parallel treatment received 3 cycles of 2 months drought followed by 150mm irrigation within 3 hours. We took soil samples 1 day before, 1 day after and 1 week after rewetting events and analyzed them for soil nutrients and extracellular enzyme activities. Soil fluxes of CO2, N2O and CH4 were constantly monitored with an automated flux chamber system, and environmental parameters were recorded via dataloggers. In addition, we determined fluxes and nutrient concentrations of bulk precipitation, throughfall, stemflow, litter percolate and soil water. Next we plan to analyze soil microbial community composition via PLFAs to investigate microbial stress resistance and resilience, and we will use ultrasonication to measure soil aggregate stability and protection of soil organic matter in stressed and control plots. The results of the first year show that experimental rainfall manipulation has influenced soil extracellular enzymes. Potential phenoloxidase activity was significantly reduced in stressed treatments compared to control plots. All measured hydrolytic enzymes (cellulase, chitinase, phosphatase and protease) and phenoloxidase responded strongly to rewetting events with significantly increased activities. Furthermore, we observed a pulsed release of inorganic nitrogen which resulted in high concentrations of NH4 and NO3 in the first 24h after soil rewetting, especially in summer when soil temperatures were high. Emissions of CO2 were increased in the first 24 to 48h after rewetting, and then slowly decreased again. Overall, our results indicate that repeated dry-wet cycles strongly influence microbial soil processes, even in the first year of experimental rainfall manipulation. The next 2 years will show whether these changes are permanent, or if the system adapts to the new precipitation regime.

Soil CO2 efflux from two mountain forests in the eastern Himalayas, Bhutan: components and controls

NASA Astrophysics Data System (ADS)

Wangdi, Norbu; Mayer, Mathias; Prasad Nirola, Mani; Zangmo, Norbu; Orong, Karma; Uddin Ahmed, Iftekhar; Darabant, Andras; Jandl, Robert; Gratzer, Georg; Schindlbacher, Andreas

2017-01-01

The biogeochemistry of mountain forests in the Hindu Kush Himalaya range is poorly studied, although climate change is expected to disproportionally affect the region. We measured the soil CO2 efflux (Rs) at a high-elevation (3260 m) mixed forest and a lower-elevation (2460 m) broadleaf forest in Bhutan, eastern Himalayas, during 2015. Trenching was applied to estimate the contribution of autotrophic (Ra) and heterotrophic (Rh) soil respiration. The temperature (Q10) and the moisture sensitivities of Rh were determined under controlled laboratory conditions and were used to model Rh in the field. The higher-elevation mixed forest had a higher standing tree stock, reflected in higher soil C stocks and basal soil respiration. Annual Rs was similar between the two forest sites (14.5 ± 1.2 t C ha-1 for broadleaf; 12.8 ± 1.0 t C ha-1 for mixed). Modelled annual contribution of Rh was ˜ 65 % of Rs at both sites with a higher heterotrophic contribution during winter and lower contribution during the monsoon season. Rh, estimated from trenching, was in the range of modelled Rh but showed higher temporal variability. The measured temperature sensitivity of Rh was similar at the mixed and broadleaf forest sites (Q10 2.2-2.3) under intermediate soil moisture but decreased (Q10 1.5 at both sites) in dry soil. Rs closely followed the annual course of field soil temperature at both sites. Covariation between soil temperature and moisture (cold dry winters and warm wet summers) was likely the main cause for this close relationship. Under the prevailing weather conditions, a simple temperature-driven model was able to explain more than 90 % of the temporal variation in Rs. A longer time series and/or experimental climate manipulations are required to understand the effects of eventually occurring climate extremes such as monsoon failures.

Canadian Field Soils IV: Modeling Thermal Conductivity at Dryness and Saturation

NASA Astrophysics Data System (ADS)

Tarnawski, V. R.; McCombie, M. L.; Leong, W. H.; Coppa, P.; Corasaniti, S.; Bovesecchi, G.

2018-03-01

The thermal conductivity data of 40 Canadian soils at dryness (λ _{dry}) and at full saturation (λ _{sat}) were used to verify 13 predictive models, i.e., four mechanistic, four semi-empirical and five empirical equations. The performance of each model, for λ _{dry} and λ _{sat}, was evaluated using a standard deviation ( SD) formula. Among the mechanistic models applied to dry soils, the closest λ _{dry} estimates were obtained by MaxRTCM (it{SD} = ± 0.018 Wm^{-1}\\cdot K^{-1}), followed by de Vries and a series-parallel model (S-{\\vert }{\\vert }). Among the semi-empirical equations (deVries-ave, Advanced Geometric Mean Model (A-GMM), Chaudhary and Bhandari (C-B) and Chen's equation), the closest λ _{dry} estimates were obtained by the C-B model (± 0.022 Wm^{-1}\\cdot K^{-1}). Among the empirical equations, the top λ _{dry} estimates were given by CDry-40 (± 0.021 Wm^{-1}\\cdot K^{-1} and ± 0.018 Wm^{-1}\\cdot K^{-1} for18-coarse and 22-fine soils, respectively). In addition, λ _{dry} and λ _{sat} models were applied to the λ _{sat} database of 21 other soils. From all the models tested, only the maxRTCM and the CDry-40 models provided the closest λ _{dry} estimates for the 40 Canadian soils as well as the 21 soils. The best λ _{sat} estimates for the 40-Canadian soils and the 21 soils were given by the A-GMM and the S-{\\vert }{\\vert } model.

Microbial utilization of litter carbon under the effect of extreme weather events

NASA Astrophysics Data System (ADS)

Heinrich, Steffen; Kuzyakov, Yakov; Glaser, Bruno

2015-04-01

Climate change is expected to not only lead to an increase of average annual temperature but also to increase the frequency of extreme meteorological events. For example, extreme summer-droughts followed by heavy rainfall events are likely to increase. This may change SOM quality, composition, microbial community functioning and thus C turnover in temperate forest ecosystems. Therefore, we performed a tracer experiment in the "Fichtelgebirge" (Northern Bavaria) to verify the influence of strong drying followed by intensive rewetting on the microbial community structure and decomposition of litter-derived 13C by individual microbial groups. In 2010, sheltered plots with artificially simulated drought, those with additional irrigation and control sites under natural conditions were established at a Norway spruce forest. At each plot, we added 13C enriched spruce litter to simulate annual litter fall. Thereafter, we assessed the effect of extreme weather events on microbial community structure by phospholipid fatty acid (PLFA) analysis. In addition, we analyzed the 13C incorporation into bulk soil, microbial biomass and PLFA of the organic horizon and the mineral soil up to 10 cm. Additionally respired CO2 was quantified by closed chambers. Drought reduced the microbial biomass only in the organic horizon, while in the mineral soil the microbial abundance did not decrease compared to the control and irrigated plots. The decrease in microbial biomass in the organic horizon of the drought plots resulted also in a strongly reduced incorporation of litter derived C: Incorporation of litter 13C was a magnitude of three lower in the drought plots compared to the control and irrigation plots. Furthermore, after the drought period of 90 days the proportion of 13C in CO2 from soil respiration was reduced by about 95% on the drought plots compared to the control and irrigated plots. This is in agreement with the reduced degradation of litter derived C and thus a reduced C turnover under dry conditions. PLFA analysis showed high amounts of gram positive and gram negative bacterial as well as fungal fatty acids, whereas actinomycets and protozoa represented minor groups. An increased ratio of the cy-PLFA to (16:1w7c+18:1w7c) on the drought plots of the organic layer suggest that bacteria suffered from water stress. In comparison to other microbial groups only the fungi were not depleted by drought showing the advantage of hyphae in resisting unfavourable environmental conditions compared to the single cells organisms. Both, in the organic horizon and the mineral soil, most 13C was incorporated into the gram negative bacteria and into fungi, whereas actinomycetes and protozoa showed the lowest incorporation. This tendency is even enhanced for the drought plots. Gram positive bacteria showed a low incorporation of litter derived C despite their high abundance, which reflects their general preference for old SOM-derived C sources. Combining 13C-labeling and 13C partitioning in microbial and SOM pools provides a powerful method combination to understand the mechanisms of SOM turnover especially those which are microbially controlled. This will fundamentally improve our understanding of C pool dynamics under changing environmental conditions like extreme whether events.

Climate and Hydrological Data Analysis for hydrological and solute transport modelling purposes in the Muriaé River basin, Atlantic Forest Biome, SE Brazil

NASA Astrophysics Data System (ADS)

Santos, Juliana; Künne, Annika; Kralisch, Sven; Fink, Manfred; Brenning, Alexander

2016-04-01

The Muriaé River basin in SE Brazil has been experiencing an increasing pressure on water resources, due to the population growth of the Rio de Janeiro urban area connected with the growth of the industrial and agricultural sector. This leads to water scarcity, riverine forest degradation, soil erosion and water quality problems among other impacts. Additionally the region has been suffering with seasonal precipitation variations leading to extreme events such as droughts, floods and landslides. Climate projections for the near future indicate a high inter-annual variability of rainfall with an increase in the frequency and intensity of heavy rainfall events combined with a statistically significant increase in the duration of dry periods and a reduced duration of wet periods. This may lead to increased soil erosion during the wet season, while the longer dry periods may reduce the vegetation cover, leaving the soil even more exposed and vulnerable to soil erosion. In consequence, it is crucial to understand how climate affects the interaction between the timing of extreme rainfall events, hydrological processes, vegetation growth, soil cover and soil erosion. In this context, physically-based hydrological modelling can contribute to a better understanding of spatial-temporal process dynamics in the Earth's system and support Integrated Water Resourses Management (IWRM) and adaptation strategies. The study area is the Muriaé river basin which has an area of approx. 8000 km² in Minas Gerais and Rio de Janeiro States. The basin is representative of a region of domain of hillslopes areas with the predominancy of pasture for livestock production. This study will present some of the relevant analyses which have been carried out on data (climate and streamflow) prior to using them for hydrological modelling, including consistency checks, homogeneity, pattern and statistical analyses, or annual and seasonal trends detection. Several inconsistencies on the raw data were detected and excluded from the dataset. Statistically significant annual and seasonal trends have been detected such as an increasing trend for annual mean temperature, a decreasing trend for annual relative humidity and an increasing trend for precipitation during the wet season. Moreover, the physically-based and fully distributed hydrological model JAMS/J2K-S has been applied and the spatial-temporal visualization of the climate data as well as an evaluation of spatial uncertainty will be presented.

A comparison of bacterial and fungal biomass in several cultivated soils.

PubMed

Kaczmarek, W

1984-01-01

Bacterial and fungal biomass was estimated in incubated samples of three cultivated soils, the influence of glucose, ammonium nitrate and cattle slurry on its formation being studied. The microbial biomass was determined in stained microscopic preparations of soil suspension. Bacterial biomass in the control samples was from 0.17 to 0.66 mg dry wt per 1 g dry soil and independently of the applied supplements was on the average two times larger in muck soils than in sand. Fungal biomass in the control soils ranged from 0.013 to 0.161 mg dry wt per 1 g dry soil, no relationship being found between its size and the soil type. As a result, the ratio of the size of fungal to bacterial biomass was dependent on the soil type; in sand the fungal biomass corresponded to 1/3 of the bacterial biomass, and in muck soils--only to 1/7.

Increasing flash droughts over China during the recent global warming hiatus

PubMed Central

Wang, Linying; Yuan, Xing; Xie, Zhenghui; Wu, Peili; Li, Yaohui

2016-01-01

The recent global warming slowdown or hiatus after the big El Niño event in 1997/98 raises the questions of whether terrestrial hydrological cycle is being decelerated and how do the hydrological extremes respond to the hiatus. However, the rapidly developing drought events that are termed as “flash droughts” accompanied by extreme heat, low soil moisture and high evapotranspiration (ET), occurred frequently around the world, and caused devastating impacts on crop yields and water supply. Here, we investigate the long-term trend and variability of flash droughts over China. Flash droughts are most likely to occur over humid and semi-humid regions, such as southern and northeastern China. Flash drought averaged over China increased by 109% from 1979 to 2010, and the increase was mainly due to a long term warming of temperature (50%), followed by the contributions from decreasing soil moisture and increasing ET. There was a slight drop in temperature after 1997, but the increasing trend of flash droughts was tripled. Further results indicate that the decreasing temperature was compensated by the accelerated drying trends of soil moisture and enhanced ET, leading to an acceleration of flash droughts during the warming hiatus. The anthropogenic warming in the next few decades may exacerbate future flash drought conditions in China. PMID:27513724

Dermally adhered soil: 2. Reconstruction of dry-sieve particle-size distributions from wet-sieve data.

PubMed

Choate, LaDonna M; Ranville, James F; Bunge, Annette L; Macalady, Donald L

2006-10-01

In the evaluation of soil particle-size effects on environmental processes, particle-size distributions are measured by either wet or dry sieving. Commonly, size distributions determined by wet and dry sieving differ because some particles disaggregate in water. Whereas the dry-sieve distributions are most relevant to the study of soil adherence to skin, soil can be recovered from skin only by washing with the potential for disaggregation whether or not it is subsequently wet or dry sieved. Thus, the possibility exists that wet-sieving measurements of the particle sizes that adhered to the skin could be skewed toward the smaller fractions. This paper provides a method by which dry-sieve particle-size distributions can be reconstructed from wet-sieve particle-size distributions for the same soil. The approach combines mass balances with a series of experiments in which wet sieving was applied to dry-sieve fractions from the original soil. Unless the soil moisture content is high (i.e., greater than or equal to the water content after equilibration with water-saturated air), only the soil particles of diameters less than about 63 microm adhere to the skin. Because of this, the adhering particle-size distribution calculated using the reconstruction method was not significantly different from the wet-sieving determinations.

Contrasting extremes in water-related stresses determine species survival

NASA Astrophysics Data System (ADS)

Bartholomeus, R. P.; Witte, J. P. M.; van Bodegom, P. M.; van Dam, J. C.; Aerts, R.

2012-04-01

In temperate climates, soil moisture, in concert with nutrient availability and soil acidity, is the most important environmental filter in determining local plant species composition, as it determines the availability of both oxygen and water to plant roots. These resources are indispensable for meeting the physiological demands of plants. Especially the occurrence of both excessive dry and wet moisture conditions at a particular site has strong implications for the survival of species, because plants need traits that allow them to respond to such counteracting conditions. However, adapting to one stress may go at the cost of the other, i.e. there exists a trade-off in the tolerance for wet conditions and the tolerance for dry conditions. Until now, both large-scale (global) and plot-scale effects of soil moisture conditions on plant species composition have mostly been investigated through indirect environmental measures, which do not include the key soil physical and plant physiological processes in the soil-plant-atmosphere system. Moreover, researchers only determined effects of one of the water-related stresses, i.e. either oxygen or drought stress. In order to quantify both oxygen and drought stress with causal measures, we focused on interacting meteorological, soil physical, microbial, and plant physiological processes in the soil-plant-atmosphere system. We simulated these plant stresses with a novel, process-based approach, incorporating in detail the interacting processes in the soil-plant-atmosphere interface. High variability and extremes in resource availability can be highly detrimental to plant species ('you can only die once'). We show that co-occurrence of oxygen and drought stress reduces the percentage of specialists within a vegetation plot. The percentage of non-specialists within a vegetation plot, however, decreases significantly with increasing stress as long as only one of the stresses prevails, but increases significantly with an increased co-occurrence of oxygen and drought stress. These results confirm earlier suggestions that species that are simultaneously tolerant to multiple stresses, lack full adaptation to each potential stress. Specific adaptations to either oxygen or drought stress thus reduce the adaptive ability to the other stress and increase the impact of the other stress. We further show that the combination of stresses is detrimental particularly to endangered species, while the number of common species within a vegetation plot does not decline with increasing co-occurrence and intensification of oxygen and drought stress. Additionally, our results show significantly smaller tolerance ranges for oxygen and drought stress for endangered species than for common species. Variability in the availability of resources is thus especially detrimental to species with narrow physiological tolerance ranges. Finally, we found that increased rainfall variability in interaction with predicted changes in temperature and CO2, may affect soil moisture conditions and plant oxygen and water demands such, that both oxygen stress and drought stress will intensify due to climate change. Moreover, these stresses will increasingly coincide, causing variable stress conditions. Consequently, more variable and extreme meteorological conditions may decrease the future habitat suitability, especially for specialists and plant species that are presently endangered, which has direct implications for policies to maintain species.

Open-type miniature heat pipes

DOE Office of Scientific and Technical Information (OSTI.GOV)

Vasiliev, L.L.

1994-01-01

The hypothesis that systems of thermoregulation, similar to open-type micro heat pipes, exist in nature (soils, living organisms, plants) and in a number of technological processes (drying, thermodynamic cycles on solid adsorbents) is considered. The hydrodynamics and heat transfer in such thermoregulation systems differ from the hydrodynamics and heat transfer in classical heat pipes, since their geometrical dimensions are extremely small (dozens of microns), adhesion forces are powerful, the effect of the field of capillary and gravitational forces is significant, and strong interaction between counter-current flows of vapor and liquid takes place.

Microbial Communities of High-Elevation Fumaroles, Penitentes, and Dry Tephra "Soils" of the Puna de Atacama Volcanic Zone.

PubMed

Solon, Adam J; Vimercati, Lara; Darcy, J L; Arán, Pablo; Porazinska, Dorota; Dorador, C; Farías, M E; Schmidt, S K

2018-01-05

The aim of this study was to understand the spatial distribution of microbial communities (18S and 16S rRNA genes) across one of the harshest terrestrial landscapes on Earth. We carried out Illumina sequencing using samples from two expeditions to the high slopes (up to 6050 m.a.s.l.) of Volcán Socompa and Llullaillaco to describe the microbial communities associated with the extremely dry tephra compared to areas that receive water from fumaroles and ice fields made up of nieves penitentes. There were strong spatial patterns relative to these landscape features with the most diverse (alpha diversity) communities being associated with fumaroles. Penitentes did not significantly increase alpha diversity compared to dry tephra at the same elevation (5825 m.a.s.l.) on Volcán Socompa, but the structure of the 18S community (beta diversity) was significantly affected by the presence of penitentes on both Socompa and Llullaillaco. In addition, the 18S community was significantly different in tephra wetted by penitentes versus dry tephra sites across many elevations on Llullaillaco. Traditional phototrophs (algae and cyanobacteria) were abundant in wetter tephra associated with fumaroles, and algae (but not cyanobacteria) were common in tephra associated with penitentes. Dry tephra had neither algae nor cyanobacteria but did host potential phototrophs in the Rhodospirillales on Volcán Llullaillaco, but not on Socompa. These results provide new insights into the distribution of microbes across one of the most extreme terrestrial environments on Earth and provide the first ever glimpse of life associated with nieves penitentes, spire-shaped ice structures that are widespread across the mostly unexplored high-elevation Andean Central Volcanic Zone.

Colloid-facilitated mobilization of metals by freeze-thaw cycles.

PubMed

Mohanty, Sanjay K; Saiers, James E; Ryan, Joseph N

2014-01-21

The potential of freeze-thaw cycles to release colloids and colloid-associated contaminants into water is unknown. We examined the effect of freeze-thaw cycles on the mobilization of cesium and strontium in association with colloids in intact cores of a fractured soil, where preferential flow paths are prevalent. Two intact cores were contaminated with cesium and strontium. To mobilize colloids and metal cations sequestered in the soil cores, each core was subjected to 10 intermittent wetting events separated by 66 h pauses. During the first five pauses, the cores were dried at room temperature, and during last five pauses, the cores were subjected to 42 h of freezing followed by 24 h of thawing. In comparison to drying, freeze-thaw cycles created additional preferential flow paths through which colloids, cesium, and strontium were mobilized. The wetting events following freeze-thaw intervals mobilized about twice as many colloids as wetting events following drying at room temperature. Successive wetting events following 66 h of drying mobilized similar amounts of colloids; in contrast, successive wetting events after 66 h of freeze-thaw intervals mobilized greater amounts of colloids than the previous one. Drying and freeze-thaw treatments, respectively, increased and decreased the dissolved cesium and strontium, but both treatments increased the colloidal cesium and strontium. Overall, the freeze-thaw cycles increased the mobilization of metal contaminants primarily in association with colloids through preferential flow paths. These findings suggest that the mobilization of colloid and colloid-associated contaminants could increase when temperature variations occur around the freezing point of water. Thus, climate extremes have the potential to mobilize contaminants that have been sequestered in the vadose zone for decades.

The impact of a pulsing groundwater table on greenhouse gas emissions in riparian grey alder stands.

PubMed

Mander, Ülo; Maddison, Martin; Soosaar, Kaido; Teemusk, Alar; Kanal, Arno; Uri, Veiko; Truu, Jaak

2015-02-01

Floods control greenhouse gas (GHG) emissions in floodplains; however, there is a lack of data on the impact of short-term events on emissions. We studied the short-term effect of changing groundwater (GW) depth on the emission of (GHG) carbon dioxide (CO2), methane (CH4), and nitrous oxide (N2O) in two riparian grey alder (Alnus incana) stands of different age in Kambja, southern Estonia, using the opaque static chamber (five replicates in each site) and gas chromatography methods. The average carbon and total nitrogen content in the soil of the old alder (OA) stand was significantly higher than in the young alder (YA) stand. In both stands, one part was chosen for water table manipulation (Manip) and another remained unchanged with a stable and deeper GW table. Groundwater table manipulation (flooding) significantly increases CH4 emission (average: YA-Dry 468, YA-Manip 8,374, OA-Dry 468, OA-Manip 4,187 μg C m(-2) h(-1)) and decreases both CO2 (average: OA-Dry 138, OA-Manip 80 mg C m(-2) h(-1)) and N2O emissions (average: OA-Dry 23.1, OA-Manip 11.8 μg N m(-2) h(-1)) in OA sites. There was no significant difference in CO2 and CH4 emissions between the OA and YA sites, whereas in OA sites with higher N concentration in the soil, the N2O emission was significantly higher than at the YA sites. The relative CO2 and CH4 emissions (the soil C stock-related share of gaseous losses) were higher in manipulated plots showing the highest values in the YA-Manip plot (0.03 and 0.0030 % C day(-1), respectively). The soil N stock-related N2O emission was very low achieving 0.000019 % N day(-1) in the OA-Dry plot. Methane emission shows a negative correlation with GW, whereas the 20 cm depth is a significant limit below which most of the produced CH4 is oxidized. In terms of CO2 and N2O, the deeper GW table significantly increases emission. In riparian zones of headwater streams, the short-term floods (e.g. those driven by extreme climate events) may significantly enhance methane emission whereas the long-term lowering of the groundwater table is a more important initiator of N2O fluxes from riparian gley soils than flood pulses.

Growth and transpiration of Japanese cedar (Cryptomeria japonica) and Hinoki cypress (Chamaecyparis obtusa) seedlings in response to soil water content.

PubMed

Nagakura, Junko; Shigenaga, Hidetoshi; Akama, Akio; Takahashi, Masamichi

2004-11-01

To investigate the effects of soil water content on growth and transpiration of Japanese cedar (Cryptomeria japonica D. Don) and Hinoki cypress (Chamaecyparis obtusa (Siebold et Zucc.) Endl.), potted seedlings were grown in well-watered soil (wet treatment) or in drying soil (dry treatment) for 12 weeks. Seedlings in the wet treatment were watered once every 2 or 3 days, whereas seedlings in the dry treatment were watered when soil water content (Theta; m3 m(-3)) reached 0.30, equivalent to a soil matric potential of -0.06 MPa. From Weeks 7 to 12 after the onset of the treatments, seedling transpiration was measured by weighing the potted seedlings. After the last watering, changes in transpiration rate during soil drying were monitored intensely. The dry treatment restricted aboveground growth but increased biomass allocation to the roots in both species, resulting in no significant treatment difference in whole-plant biomass production. The species showed similar responses in relative growth rate (RGR), net assimilation rate (NAR) and shoot mass ratio (SMR) to the dry treatment. Although NAR did not change significantly in either C. japonica or C. obtusa as the soil dried, the two species responded differently to the dry treatment in terms of mean transpiration rate (E) and water-use efficiency (WUE), which are parameters that relate to NAR. In the dry treatment, both E and WUE of C. japonica were stable, whereas in C. obtusa, E decreased and WUE increased (E and WUE counterbalanced to maintain a constant NAR). Transpiration rates were lower in C. obtusa seedlings than in C. japonica seedlings, even in well-watered conditions. During soil drying, the transpiration rate decreased after Theta reached about 0.38 (-0.003 MPa) in C. obtusa and 0.32 (-0.028 MPa) in C. japonica. We conclude that C. obtusa has more water-saving characteristics than C. japonica, particularly when water supply is limited.

Studies on mycorrhizal inoculation on dry matter yield and root colonization of some medicinal plants grown in stress and forest soils.

PubMed

Chandra, K K; Kumar, Neeraj; Chand, Gireesh

2010-11-01

Five medicinal plants viz. Abelmoschatus moschatus Linn., Clitoria tematea L., Plumbagozeylanica L., Psorolea corylifolia L. and Withania sominifera L. were grown in a polypot experiment in five soils representing coal mine soil, coppermine soil, fly ash, skeletal soil and forest soil with and without mycorrhizal inoculations in a completely randomized block design. Dry matter yield and mycorrhizal root colonization of plants varied both in uninoculated and inoculated conditions. The forest soil rendered highest dry matter due to higher yield of A. moschatus, P. zeylanica and P corylifolia while fly ash showed lowest dry matter without any inoculants. P. cematea were best in coalmine soil and W. sominifera in copper mine soil without mycorrhizal inoculation. The mycorrhiza was found to enhance the dry matter yield. This contributed minimum 0.19% to maximum up to 422.0% in different soils as compared to uninoculated plants. The mycorrhizal dependency was noticed maximum in plants grown in fly ash followed by coal mine soil, copper mine soil, skeletal soil and forest soil. The mycorrhizal response was increased maximum in W. sominifera due to survival in fly ash after inoculation followed by P corylifolia and P cematea. Percent root colonization in inoculated plant was increased minimum of 1.10 fold to maximum of 12.0 folds in comparison to un-inoculated plants . The native mycorrhiza fungi were also observed to colonize 4.0 to 32.0% roots in plants understudy. This study suggests that mycorrhizal inoculation increased the dry matter yield of medicinal plants in all soils under study. It also helps in survival of W. sominifera in fly ash.

Associations between soil variables and vegetation structure and composition of Caribbean dry forests

Treesearch

Elvia M. Melendez-Ackerman; Julissa Rojas-Sandoval; Danny S. Fernandez; Grizelle Gonzalez; Hana Lopez; Jose Sustache; Mariely Morales; Miguel Garcia-Bermudez; Susan Aragon

2016-01-01

Soil–vegetation associations have been understudied in tropical dry forests when compared to the amount of extant research on this issue in tropical wet forests. Recent studies assert that vegetation in tropical dry forests is highly heterogeneous and that soil variability may be a contributing factor. In this study, we evaluated the relationship between soil variables...

[Restoration of microbial ammonia oxidizers in air-dried forest soils upon wetting].

PubMed

Zhou, Xue; Huang, Rong; Song, Ge; Pan, Xianzhang; Jia, Zhongjun

2014-11-04

This study was aimed to investigate the abundance and community shift of ammonia-oxidizing archaea (AOA) and bacteria (AOB) in air-dried forest soils in response to water addition, to explore the applicability of air-dried soil for microbial ecology study, and to elucidate whether AOA within the marine group 1. 1a dominate ammonia oxidizers communities in the acidic forest soils in China. Soil samples were collected from 10 forest sites of the China Ecosystem Research Network (CERN) and kept under air-drying conditions in 2010. In 2013 the air-dried soil samples were adjusted to 60% of soil maximum water holding capacity for a 28-day incubation at 28 degrees C in darkness. DGGE fingerprinting, clone library construction, pyrosequencing and quantitative PCR of amoA genes were performed to assess community change of ammonia oxidizers in air-dried and re-wetted soils. After incubation for 28 days, the abundance of bacteria and archaea increased significantly, up to 3,230 and 568 times, respectively. AOA increased significantly in 8 samples, and AOB increased significantly in 5 of 10 samples. However, pyrosequencing of amoA genes reveals insignificant changes in composition of AOA and AOB communities. Phylogenetic analysis of amoA genes indicates that archaeal ammonia oxidizers were predominated by AOA within the soil group 1. 1b lineage, while the Nitrosospira-like AOB dominate bacteria ammonia oxidizer communities. There was a significantly positive correlation between AOA/AOB ratio and total nitrogen (r2 = 0.54, P < 0.05), implying that soil ammonia oxidation might be dominated by AOA in association with ammonium released from soil mineralization. Phylogenetic analysis suggest that AOA members within the soil group 1. 1b lineage were not restricted to non-acidic soils as previously thought. The abundance rather than composition of AOA and AOB changed in response to water addition. This indicates that air-dried soil could be of help for microbial biogeography study.

Detecting Climate Signals in Precipitation Extremes from TRMM (1998-2013) - Increasing Contrast Between Wet and Dry Extremes During the "Global Warming Hiatus"

NASA Technical Reports Server (NTRS)

Wu, Huey-Tzu Jenny; Lau, William K.-M.

2016-01-01

We investigate changes in daily precipitation extremes using Tropical Rainfall Measuring Mission (TRMM) data (1998-2013), which coincides with the "global warming hiatus." Results show a change in probability distribution functions of local precipitation events (LPEs) during this period consistent with previous global warming studies, indicating increasing contrast between wet and dry extremes, with more intense LPE, less moderate LPE, and more dry (no rain) days globally. Analyses for land and ocean separately reveal more complex and nuanced changes over land, characterized by a strong positive trend (+12.0% per decade, 99% confidence level (c.l.)) in frequency of extreme LPEs over the Northern Hemisphere extratropics during the wet season but a negative global trend (-6.6% per decade, 95% c.l.) during the dry season. A significant global drying trend (3.2% per decade, 99% c.l.) over land is also found during the dry season. Regions of pronounced increased dry events include western and central U.S., northeastern Asia, and Southern Europe/Mediterranean.

Biopesticide effect of green compost against fusarium wilt on melon plants.

PubMed

Ros, M; Hernandez, M T; Garcia, C; Bernal, A; Pascual, J A

2005-01-01

The biopesticide effect of four green composts against fusarium wilt in melon plants and the effect of soil quality in soils amended with composts were assayed. The composts consisted of pruning wastes, with or without addition of coffee wastes (3/1 and 4/1, dry wt/dry wt) or urea (1000/1, dry wt/dry wt). In vitro experiments suggested the biopesticide effect of the composts against Fusarium oxysporum, while only the compost of pine bark and urea (1000/1dry wt/dry wt) had an abiotic effect. Melon plant growth with composts and F. oxysporum was one to four times greater than in the non-amended soil, although there was no significant decrease in the level of the F. oxysporum in the soil. The addition of composts to the soil also improved its biological quality, as assessed by microbiological and biochemical parameters: ATP and hydrolases involved in the P (phosphatase), C (beta-glucosidase) and N (urease) cycles. Green composts had greater beneficial characteristics, improved plant growth and controlled fusarium wilt in melon plants. These composts improve the soil quality of semi-arid agricultural soils. Biotic and abiotic factors from composts have been tested as responsible of their biopesticide activity against fusarium wilt.

Diagnosing the Nature of Land-Atmosphere Coupling During the 2006-7 Dry/Wet Extremes in the U.S. Southern Great Plains

NASA Technical Reports Server (NTRS)

Santanello, Joseph A., Jr.; Peters-Lidard, Christa D.; Kumar, Sujay V.; Dong, Xiquan; Kennedy, Aaron D.

2011-01-01

Land-atmosphere interactions play a critical role in determining the. diurnal evolution of both planetary boundary layer (PBL) and land surface temperature and moisture states. The degree of coupling between the land surface and PBL in numerical weather prediction and climate models remains largely unexplored and undiagnosed due to the complex interactions and feedbacks present across a range of scales. Further, uncoupled systems or experiments (e.g., the Project for Intercomparison of Land Parameterization Schemes, PILPS) may lead to inaccurate water and energy cycle process understanding by neglecting feedback processes such as PBL-top entrainment. In this study, a framework for diagnosing local land-atmosphere coupling (LoCo) is presented using a coupled mesoscale model with a suite of PBL and land surface model (LSM) options along with observations during the summers of 200617 in the U.S. Southern Great Plains. Specifically, the Weather Research and Forecasting (WRF) model has been coupled to NASA's Land Information System (LIS), which provides a flexible and high-resolution representation and initialization of land surface physics and states. A range of diagnostics exploring the links and feedbacks between soil moisture and precipitation are examined for the dry/wet extremes of this region, along with the sensitivity of PBL-LSM coupling to perturbations in soil moisture. As such, this methodology provides a potential pathway to study factors controlling local land-atmosphere coupling (LoCo) using the LIS-WRF system, which is serving as a testbed for LoCo experiments to evaluate coupling diagnostics within the community.

Nitrogen metabolism correlates with the acclimation of photosynthesis to short-term water stress in rice (Oryza sativa L.).

PubMed

Zhong, Chu; Cao, Xiaochuang; Bai, Zhigang; Zhang, Junhua; Zhu, Lianfeng; Huang, Jianliang; Jin, Qianyu

2018-04-01

Nitrogen metabolism is as sensitive to water stress as photosynthesis, but its role in plant under soil drying is not well understood. We hypothesized that the alterations in N metabolism could be related to the acclimation of photosynthesis to water stress. The features of photosynthesis and N metabolism in a japonica rice 'Jiayou 5' and an indica rice 'Zhongzheyou 1' were investigated under mild and moderate soil drying with a pot experiment. Soil drying increased non-photochemical quenching (NPQ) and reduced photon quantum efficiency of PSII and CO 2 fixation in 'Zhongzheyou 1', whereas the effect was much slighter in 'Jiayou 5'. Nevertheless, the photosynthetic rate of the two cultivars showed no significant difference between control and water stress. Soil drying increased nitrate reducing in leaves of 'Zhongzheyou 1', characterized by enhanced nitrate reductase (NR) activity and lowered nitrate content; whereas glutamate dehydrogenase (GDH), glutamic-oxaloacetic transaminase (GOT) and glutamic-pyruvic transaminase (GPT) were relative slightly affected. 'Jiayou 5' plants increased the accumulation of nitrate under soil drying, although its NR activity was increased. In addition, the activities of GDH, GOT and GPT were typically increased under soil drying. Besides, amino acids and soluble sugar were significantly increased under mild and moderate soil drying, respectively. The accumulation of nitrate, amino acid and sugar could serve as osmotica in 'Jiayou 5'. The results reveal that N metabolism plays diverse roles in the photosynthetic acclimation of rice plants to soil drying. Copyright © 2018 Elsevier Masson SAS. All rights reserved.

1,4-Dioxane Remediation by Extreme Soil Vapor Extraction (XSVE). Screening-Level Feasibility Assessment and Design Tool in Support of 1,4-Dioxane Remediation by Extreme Soil Vapor Extraction (XSVE) ESTCP Project ER 201326

DTIC Science & Technology

2017-10-01

USER GUIDE 1,4-Dioxane Remediation by Extreme Soil Vapor Extraction (XSVE) Screening-Level Feasibility Assessment and Design Tool in...Support of 1,4-Dioxane Remediation by Extreme Soil Vapor Extraction (XSVE) ESTCP Project ER-201326 OCTOBER 2017 Rob Hinchee Integrated Science...Technology, Inc. 1509 Coastal Highway Panacea, FL 32346 8/8/2013 - 8/8/2018 10-2017 1,4-Dioxane Remediation by Extreme Soil Vapor Extraction (XSVE) Screening

Influence of Dry Soil on the Ability of Formosan Subterranean Termites, Coptotermes formosanus, to Locate Food Sources

PubMed Central

Cornelius, Mary L.; Osbrink, Weste L.A.

2011-01-01

The effect of barriers of dry soil on the ability of Formosan subterranean termites, Coptotermes formosanus Shiraki (Isoptera: Rhinotermitidae), to construct tunnels and find food was evaluated. Termite movement and wood consumption in a three—chambered apparatus were compared between treatments with dry soil in the center container and treatments where the soil in the center container was moist. When a wood block was located in the release container, termites fed significantly more on that block, regardless of treatment or soil type. In the treatment with dry clay, none of the termites tunneled through the dry clay barrier to reach the distal container. When termites had to tunnel through a barrier of dry sand, topsoil, or clay to reach the sole wood block, there was no effect on wood consumption for the sand treatment, but there was significantly less feeding on wood in the treatments with dry topsoil or clay. When foraging arenas had a section of dry sand in the center, the dry sand significantly reduced tunneling in the distal section after 3 days, but not after 10 days. There was a highly significant effect on the ability of termites to colonize food located in dry sand. Only one feeding station located in dry sand was colonized by termites, compared with 11 feeding stations located in moist sand. PMID:22239343

Applying Customized Climate Advisory Information to Translate Extreme Rainfall Events into Farming Options in the Sudan-Sahel of West Africa

NASA Astrophysics Data System (ADS)

Salack, S.; Worou, N. O.; Sanfo, S.; Nikiema, M. P.; Boubacar, I.; Paturel, J. E.; Tondoh, E. J.

2017-12-01

In West Africa, the risk of food insecurity linked to the low productivity of small holder farming increases as a result of rainfall extremes. In its recent evolution, the rainy season in the Sudan-Sahel zone presents mixed patterns of extreme climatic events. In addition to intense rain events, the distribution of events is associated with pockets of intra-seasonal long dry spells. The negative consequences of these mixed patterns are obvious on the farm: soil water logging, erosion of arable land, dwartness and dessication of crops, and loss in production. The capacity of local farming communities to respond accordingly to rainfall extreme events is often constrained by lack of access to climate information and advisory on smart crop management practices that can help translate extreme rainfall events into farming options. The objective of this work is to expose the framework and the pre-liminary results of a scheme that customizes climate-advisory information package delivery to subsistence farmers in Bakel (Senegal), Ouahigouya & Dano (Burkina Faso) and Bolgatanga (Ghana) for sustainable family agriculture. The package is based on the provision of timely climate information (48-hours, dekadal & seasonal) embedded with smart crop management practices to explore and exploite the potential advantage of intense rainfall and extreme dry spells in millet, maize, sorghum and cowpea farming communities. It is sent via mobile phones and used on selected farms (i.e agro-climatic farm schools) on which some small on-farm infrastructure were built to alleviate negative impacts of weather. Results provide prominent insight on how co-production of weather/climate information, customized access and guidiance on its use can induce fast learning (capacity building of actors), motivation for adaptation, sustainability, potential changes in cropping system, yields and family income in the face of a rainfall extremes at local scales of Sudan-Sahel of West Africa. Keywords: Climate Information, Smart Practices, Farming Options, Agro-Climatic Farm Schools, Sudan-Sahel

Microbial community dynamics induced by rewetting dry soil: summer precipitation matters

NASA Astrophysics Data System (ADS)

Barnard, Romain; Osborne, Catherine; Firestone, Mary

2015-04-01

The massive soil CO2 efflux associated with rewetting dry soils after the dry summer period significantly contributes to the annual carbon budget of Mediterranean grasslands. Rapid reactivation of soil heterotrophic activity and available carbon are both required to fuel the CO2 pulse. Better understanding of the effects of altered summer precipitation on the metabolic state of indigenous microorganisms may be important in predicting future changes in carbon cycling. We investigated the effects of a controlled rewetting event on the soil CO2 efflux pulse and on the present (DNA-based) and potentially active (rRNA-based) soil bacterial and fungal communities in intact soil cores previously subjected to three different precipitation patterns over four months (full summer dry season, extended wet season, and absent dry season). Phylogenetic marker genes for bacteria (16S) and fungi (28S) were sequenced before and after rewetting, and the abundance of these genes and transcripts was measured. Even after having experienced markedly different antecedent water conditions, the potentially active bacterial communities showed a consistent wet-up response, reflecting contrasting life-strategies for different groups. Moreover, we found a significant positive relation between the extent of change in the structure of the potentially active bacterial community and the magnitude of the CO2 pulse upon rewetting dry soils. We suggest that the duration of severe dry conditions (predicted to change under future climate) is important in conditioning the response potential of the soil bacterial community to wet-up as well as in framing the magnitude of the associated CO2 pulse.

Evaluating ESA CCI soil moisture in East Africa.

PubMed

McNally, Amy; Shukla, Shraddhanand; Arsenault, Kristi R; Wang, Shugong; Peters-Lidard, Christa D; Verdin, James P

2016-06-01

To assess growing season conditions where ground based observations are limited or unavailable, food security and agricultural drought monitoring analysts rely on publicly available remotely sensed rainfall and vegetation greenness. There are also remotely sensed soil moisture observations from missions like the European Space Agency (ESA) Soil Moisture and Ocean Salinity (SMOS) and NASA's Soil Moisture Active Passive (SMAP), however these time series are still too short to conduct studies that demonstrate the utility of these data for operational applications, or to provide historical context for extreme wet or dry events. To promote the use of remotely sensed soil moisture in agricultural drought and food security monitoring, we use East Africa as a case study to evaluate the quality of a 30+ year time series of merged active-passive microwave soil moisture from the ESA Climate Change Initiative (CCI-SM). Compared to the Normalized Difference Vegetation index (NDVI) and modeled soil moisture products, we found substantial spatial and temporal gaps in the early part of the CCI-SM record, with adequate data coverage beginning in 1992. From this point forward, growing season CCI-SM anomalies were well correlated (R>0.5) with modeled, seasonal soil moisture, and in some regions, NDVI. We use correlation analysis and qualitative comparisons at seasonal time scales to show that remotely sensed soil moisture can add information to a convergence of evidence framework that traditionally relies on rainfall and NDVI in moderately vegetated regions.

Highly Arid Oasis Yield, Soil Mineral N Accumulation and N Balance in a Wheat-Cotton Rotation with Drip Irrigation and Mulching Film Management

PubMed Central

Lv, Jinling; Liu, Hua; Wang, Xihe; Li, Kaihui; Tian, Changyan; Liu, Xuejun

2016-01-01

Few systematic studies have been carried out on integrated N balance in extremely arid oasis agricultural areas. A two-year field experiment was conducted to evaluate the N input and output balances under long-term fertilization conditions. Five treatments were chosen, namely CK (no fertilizer), NPK, NPKS (10% straw return N and 90% chemical N), NPKM (one third urea-N, two thirds sheep manure) and NPKM+ (1.5 times NPKM). The results show an abundance of dry and wet N deposition (33 kg N ha-1 yr-1) in this area. All treatments (excluding CK) showed no significant difference in wheat production (P>0.05). NPKM gave higher cotton yields (P<0.05). In both crops, NPKM and NPKS treatments had a relatively higher N harvest index (NHI). 15N-labeled results reveal that the fertilizer N in all N treatments leached to<1 m depth and a high proportion of fertilizer-N remained in the top 60 cm of the soil profile. The NPKM+ treatment had the highest residual soil mineral N (Nmin, 558 kg Nd ha-1), and NPKM and NPKS treatments had relatively low soil Nmin values (275 and 293 kg N ha-1, respectively). Most of the treatments exhibited very high apparent N losses, especially the NPKM+ treatment (369kg N ha-1). Our arid research area had a strikingly high N loss compared to less arid agricultural areas. Nitrogen inputs therefore need careful reconsideration, especially the initial soil Nmin, fertilizer N inputs, dry and wet deposition, and appropriate organic and straw inputs which are all factors that must be taken into account under very arid conditions. PMID:27798654

Aridity and plant uptake interact to make dryland soils hotspots for nitric oxide (NO) emissions

PubMed Central

Blankinship, Joseph C.; Marchus, Kenneth; Lucero, Delores M.; Sickman, James O.; Schimel, Joshua P.

2016-01-01

Nitric oxide (NO) is an important trace gas and regulator of atmospheric photochemistry. Theory suggests moist soils optimize NO emissions, whereas wet or dry soils constrain them. In drylands, however, NO emissions can be greatest in dry soils and when dry soils are rewet. To understand how aridity and vegetation interact to generate this pattern, we measured NO fluxes in a California grassland, where we manipulated vegetation cover and the length of the dry season and measured [δ15-N]NO and [δ18-O]NO following rewetting with 15N-labeled substrates. Plant N uptake reduced NO emissions by limiting N availability. In the absence of plants, soil N pools increased and NO emissions more than doubled. In dry soils, NO-producing substrates concentrated in hydrologically disconnected microsites. Upon rewetting, these concentrated N pools underwent rapid abiotic reaction, producing large NO pulses. Biological processes did not substantially contribute to the initial NO pulse but governed NO emissions within 24 h postwetting. Plants acted as an N sink, limiting NO emissions under optimal soil moisture. When soils were dry, however, the shutdown in plant N uptake, along with the activation of chemical mechanisms and the resuscitation of soil microbial processes upon rewetting, governed N loss. Aridity and vegetation interact to maintain a leaky N cycle during periods when plant N uptake is low, and hydrologically disconnected soils favor both microbial and abiotic NO-producing mechanisms. Under increasing rates of atmospheric N deposition and intensifying droughts, NO gas evasion may become an increasingly important pathway for ecosystem N loss in drylands. PMID:27114523

Sample storage-induced changes in the quantity and quality of soil labile organic carbon

PubMed Central

Sun, Shou-Qin; Cai, Hui-Ying; Chang, Scott X.; Bhatti, Jagtar S.

2015-01-01

Effects of sample storage methods on the quantity and quality of labile soil organic carbon are not fully understood even though their effects on basic soil properties have been extensively studied. We studied the effects of air-drying and frozen storage on cold and hot water soluble organic carbon (WSOC). Cold- and hot-WSOC in air-dried and frozen-stored soils were linearly correlated with those in fresh soils, indicating that storage proportionally altered the extractability of soil organic carbon. Air-drying but not frozen storage increased the concentrations of cold-WSOC and carbohydrate in cold-WSOC, while both increased polyphenol concentrations. In contrast, only polyphenol concentration in hot-WSOC was increased by air-drying and frozen storage, suggesting that hot-WSOC was less affected by sample storage. The biodegradability of cold- but not hot-WSOC was increased by air-drying, while both air-drying and frozen storage increased humification index and changed specific UV absorbance of both cold- and hot-WSOC, indicating shifts in the quality of soil WSOC. Our results suggest that storage methods affect the quantity and quality of WSOC but not comparisons between samples, frozen storage is better than air-drying if samples have to be stored, and storage should be avoided whenever possible when studying the quantity and quality of both cold- and hot-WSOC. PMID:26617054

Permafrost as an additional driving factor for the extreme fire event in the boreal Baikal region in 2003

NASA Astrophysics Data System (ADS)

Forkel, M.; Thonicke, K.; Beer, C.; Cramer, W.; Bartalev, S.; Schmullius, C.

2012-04-01

Wildfires are a natural and important element in the functioning of boreal forests. However, in some years, fires with extreme spread and severity occur. Such severe fires degrade the forest, affect human values, emit huge amount of carbon and aerosols and alter the land surface albedo. Usually, wind, slope, and dry conditions have been recognized as factors determining fire spread. In the Baikal region, 127,000 km2 burned in 2003, while the annual average burned area is approx. 8100 km2. In average years, 16% of the burned area occurred in the continuous permafrost zone but in 2003, 33% of these burned areas coincide with the existence of permanently frozen grounds. Permafrost and the associated upper active layer, which thaws during summer and refreezes during winter, is an important supply for soil moisture in boreal ecosystems. This leads to the question if permafrost hydrology is a potential additional driving factor for extreme fire events in boreal forests. Using temperature and precipitation data, we calculated the Nesterov index as indicator for fire weather conditions. Further, we used satellite observations of burned area and surface moisture, a digital elevation model, a land cover and a permafrost map to evaluate drivers for the temporal dynamic and spatial variability of surface moisture conditions and burned area in spring 2003. On the basis of time series decomposition, we separated the effect of drivers for fire activity on different time scales. We next computed cross-correlations to identify potential time lags between weather conditions, surface moisture and fire activity. Finally, we assessed the predictive capability of different combinations of driving variables for surface moisture conditions and burned area using multivariate spatial-temporal regression models. The results from this study demonstrate that permafrost in larch-dominated ecosystems regulates the inter-annual variability of surface moisture and thus increases the inter-annual variability of burned area. The drought conditions in spring 2003 were accelerated by the presence of permafrost because less water was stored in the upper active layer from the dry previous summer 2002 and the permafrost table prevents vegetative water uptake from deeper layers. In contrast, weather conditions (precipitation anomaly, Nesterov index) are weaker predictors for the 2003 fire event. Our analysis advances the understanding of complex interactions between the atmosphere, vegetation and soil on how feedback mechanisms can lead to extreme fire events. These findings emphasize the importance of a mechanistic coupling of soil thermodynamics, hydrology, and fire activity in earth system models for projecting climate change impacts over the next century.

Atmospheric conditions and weather regimes associated with extreme winter dry spells over the Mediterranean basin

NASA Astrophysics Data System (ADS)

Raymond, Florian; Ullmann, Albin; Camberlin, Pierre; Oueslati, Boutheina; Drobinski, Philippe

2018-06-01

Very long dry spell events occurring during winter are natural hazards to which the Mediterranean region is extremely vulnerable, because they can lead numerous impacts for environment and society. Four dry spell patterns have been identified in a previous work. Identifying the main associated atmospheric conditions controlling the dry spell patterns is key to better understand their dynamics and their evolution in a changing climate. Except for the Levant region, the dry spells are generally associated with anticyclonic blocking conditions located about 1000 km to the Northwest of the affected area. These anticyclonic conditions are favourable to dry spell occurrence as they are associated with subsidence of cold and dry air coming from boreal latitudes which bring low amount of water vapour and non saturated air masses, leading to clear sky and absence of precipitation. These extreme dry spells are also partly related to the classical four Euro-Atlantic weather regimes are: the two phases of the North Atlantic Oscillation, the Scandinavian "blocking" or "East-Atlantic", and the "Atlantic ridge". Only the The "East-Atlantic", "Atlantic ridge" and the positive phase of the North Atlantic Oscillation are frequently associated with extremes dry spells over the Mediterranean basin but they do not impact the four dry spell patterns equally. Finally long sequences of those weather regimes are more favourable to extreme dry spells than short sequences. These long sequences are associated with the favourable prolonged and reinforced anticyclonic conditions

Responses of soil ammonia oxidizers to a short-term severe mercury stress.

PubMed

Zhou, Zhi-Feng; Liu, Yu-Rong; Sun, Guo-Xin; Zheng, Yuan-Ming

2015-12-01

The responses of soil ammonia-oxidizing archaea (AOA) and ammonia-oxidizing bacteria (AOB) to mercury (Hg) stress were investigated through a short-term incubation experiment. Treated with four different concentrations of Hg (CK, Hg25, Hg50, and Hg100, denoting 0, 25, 50, and 100mgHg/kg dry soil, respectively), samples were harvested after 3, 7, and 28day incubation. Results showed that the soil potential nitrification rate (PNR) was significantly inhibited by Hg stress during the incubation. However, lower abundances of AOA (the highest in CK: 9.20×10(7)copies/g dry soil; the lowest in Hg50: 2.68×10(7)copies/g dry soil) and AOB (the highest in CK: 2.68×10(7)copies/g dry soil; the lowest in Hg50: 7.49×10(6)copies/g dry soil) were observed only at day 28 of incubation (P<0.05). Moreover, only the community structure of soil AOB obviously shifted under Hg stress as seen through DGGE profiles, which revealed that 2-3 distinct AOB bands emerged in the Hg treatments at day 28. In summary, soil PNR might be a very useful parameter to assess acute Hg stress on soil ecosystems, and the community structure of soil AOB might be a realistic biological indicator for the assessment of heavy metal stress on soil ecosystems in the future. Copyright © 2015. Published by Elsevier B.V.

Wet-dry cycles impact DOM retention in subsurface soils

NASA Astrophysics Data System (ADS)

Olshansky, Yaniv; Root, Robert A.; Chorover, Jon

2018-02-01

Transport and reactivity of carbon in the critical zone are highly controlled by reactions of dissolved organic matter (DOM) with subsurface soils, including adsorption, transformation and exchange. These reactions are dependent on frequent wet-dry cycles common to the unsaturated zone, particularly in semi-arid regions. To test for an effect of wet-dry cycles on DOM interaction and stabilization in subsoils, samples were collected from subsurface (Bw) horizons of an Entisol and an Alfisol from the Catalina-Jemez Critical Zone Observatory and sequentially reacted (four batch steps) with DOM extracted from the corresponding soil litter layers. Between each reaction step, soils either were allowed to air dry (wet-dry treatment) before introduction of the following DOM solution or were maintained under constant wetness (continually wet treatment). Microbial degradation was the dominant mechanism of DOM loss from solution for the Entisol subsoil, which had higher initial organic C content, whereas sorptive retention predominated in the lower C Alfisol subsoil. For a given soil, bulk dissolved organic C losses from solution were similar across treatments. However, a combination of Fourier transform infrared (FTIR) and near-edge X-ray absorption fine structure (NEXAFS) spectroscopic analyses revealed that wet-dry treatments enhanced the interactions between carboxyl functional groups and soil particle surfaces. Scanning transmission X-ray microscopy (STXM) data suggested that cation bridging by Ca2+ was the primary mechanism for carboxyl association with soil surfaces. STXM data also showed that spatial fractionation of adsorbed OM on soil organo-mineral surfaces was diminished relative to what might be inferred from previously published observations pertaining to DOM fractionation on reaction with specimen mineral phases. This study provides direct evidence of the role of wet-dry cycles in affecting sorption reactions of DOM to a complex soil matrix. In the soil environment, where wet-dry cycles occur at different frequencies from site to site and along the soil profile, different interactions between DOM and soil surfaces are expected and need to be considered for the overall assessment of carbon dynamics.

Quantification of Microbial Osmolytes in a Drought Impacted California Grassland

NASA Astrophysics Data System (ADS)

Boot, C. M.; Schaeffer, S. M.; Doyle, A. P.; Schimel, J. P.

2008-12-01

With drought frequency and severity likely increasing in the future, understanding its effect on terrestrial carbon (C) and nitrogen (N) cycling has become essential for accurately modeling ecosystem responses to climate change. Microbes respond to drought stress by accumulating internal solutes, or osmolytes, such as amino acids, betaines and polyols, to balance cell membrane water potential as the soil dries. However, when seasonal rains arrive, internal solutes are released and rapidly mineralized. We have been studying these processes in a California grassland. Beginning in summer 2007, we made monthly measurements of soil moisture, individual amino acid concentration in total soil and in microbial biomass, total dissolved organic carbon and nitrogen (DOC and DON), and microbial biomass carbon and nitrogen (MBC and MBN). We expected microbial concentrations of the known amino acid osmolytes glutamate (glu) and proline (pro) to fluctuate inversely with soil moisture. However, pro was only recovered in Mar 2008 (0.30 μg C g-1 dry soil) and the glu concentration varied proportionally with soil moisture: lowest during summer (0.06 g H2O g-1 dry soil, 2.22 μg glutamate-C g-1 dry soil) and highest in winter (0.27 g H2O g-1 dry soil, 4.43 μg glutamate-C g-1 dry soil). The trend from DOC, MBC, and DON measurements was opposite, however, with all concentrations decreasing as soil moisture shifted from dry to wet, (DOC: 64.61 to 32.49 μg C g-1 dry soil respectively). MBN was the exception to this trend, with concentrations staying nearly constant across seasons. These patterns suggest that the expected amino acids glu and pro are not being used for microbial osmoregulation in the CA grassland, and given the summer to winter decrease in MBC, the primary osmolyte source is likely to be either polyol-type compounds such as mannitol or betaines. The implications for terrestrial carbon cycle are considerable because as the frequency of drought increases, the accumulation and release of osmolytes in response to drought has potential to pump carbon out of the grassland ecosystem.

Soil aggregate and organic carbon distribution at dry land soil and paddy soil: the role of different straws returning.

PubMed

Huang, Rong; Lan, Muling; Liu, Jiang; Gao, Ming

2017-12-01

Agriculture wastes returning to soil is one of common ways to reuse crop straws in China. The returned straws are expected to improve the fertility and structural stability of soil during the degradation of straw it selves. The in situ effect of different straw (wheat, rice, maize, rape, and broad bean) applications for soil aggregate stability and soil organic carbon (SOC) distribution were studied at both dry land soil and paddy soil in this study. Wet sieving procedures were used to separate soil aggregate sizes. Aggregate stability indicators including mean weight diameter, geometric mean diameter, mean weight of specific surface area, and the fractal dimension were used to evaluate soil aggregate stability after the incubation of straws returning. Meanwhile, the variation and distribution of SOC in different-sized aggregates were further studied. Results showed that the application of straws, especially rape straw at dry land soil and rice straw at paddy soil, increased the fractions of macro-aggregate (> 0.25 mm) and micro-aggregate (0.25-0.053 mm). Suggesting the nutrients released from straw degradation promotes the growing of soil aggregates directly and indirectly. The application of different straws increased the SOC content at both soils and the SOC mainly distributed at < 0.53 mm aggregates. However, the contribution of SOC in macro- and micro-aggregates increased. Straw-applied paddy soil have a higher total SOC content but lower SOC contents at > 0.25 and 0.25-0.053 mm aggregates with dry land soil. Rape straw in dry land and rice straw in paddy field could stabilize soil aggregates and increasing SOC contents best.

[Research on characteristics of soil clay mineral evolution in paddy field and dry land by XRD spectrum].

PubMed

Zhang, Zhi-dan; Li, Qiao; Luo, Xiang-li; Jiang, Hai-chao; Zheng, Qing-fu; Zhao, Lan-po; Wang, Ji-hong

2014-08-01

The present paper took the typical saline-alkali soil in Jilin province as study object, and determinated the soil clay mineral composition characteristics of soil in paddy field and dry land. Then XRD spectrum was used to analyze the evolutionary mechanism of clay mineral in the two kinds of soil. The results showed that the physical and chemical properties of soil in paddy field were better than those in dry land, and paddy field would promote the weathering of mineral particles in saline-alkali soil and enhance the silt content. Paddy field soil showed a strong potassium-removal process, with a higher degree of clay mineral hydration and lower degree of illite crystallinity. Analysis of XRD spectrum showed that the clay mineral composition was similar in two kinds of soil, while the intensity and position of diffraction peak showed difference. The evolution process of clay mineral in dry land was S/I mixture-->vermiculite, while in paddy field it was S/I mixture-->vermiculite-->kaolinite. One kind of hydroxylated 'chlorite' mineral would appear in saline-alkali soil in long-term cultivated paddy field. Taking into account that the physical and chemical properties of soil in paddy field were better then those in dry land, we could know that paddy field could help much improve soil structure, cultivate high-fertility soil and improve saline-alkali soil. This paper used XRD spectrum to determine the characteristics of clay minerals comprehensively, and analyzed two'kinds of land use comparatively, and was a new perspective of soil minerals study.

Is the Pearl River basin, China, drying or wetting? Seasonal variations, causes and implications

NASA Astrophysics Data System (ADS)

Zhang, Qiang; Li, Jianfeng; Gu, Xihui; Shi, Peijun

2018-07-01

Soil moisture plays crucial roles in the hydrological cycle and is also a critical link between land surface and atmosphere. The Pearl River basin (PRb) is climatically subtropical and tropical and is highly sensitive to climate changes. In this study, seasonal soil moisture changes across the PRb were analyzed using the Variable Infiltration Capacity (VIC) model forced by the gridded 0.5° × 0.5° climatic observations. Seasonal changes of soil moisture in both space and time were investigated using the Mann-Kendall trend test method. Potential influencing factors behind seasonal soil moisture changes such as precipitation and temperature were identified using the Maximum Covariance Analysis (MCA) technique. The results indicated that: (1) VIC model performs well in describing changing properties of soil moisture across the PRb; (2) Distinctly different seasonal features of soil moisture can be observed. Soil moisture in spring decreased from east to west parts of the PRb. In summer however, soil moisture was higher in east and west parts but was lower in central parts of the PRb; (3) A significant drying trend was identified over the PRb in autumn, while no significant drying trends can be detected in other seasons; (4) The increase/decrease in precipitation can generally explain the wetting/drying tendency of soil moisture. However, warming temperature contributed significantly to the drying trends and these drying trends were particularly evident during autumn and winter; (5) Significant decreasing precipitation and increasing temperature combined to trigger substantially decreasing soil moisture in autumn. In winter, warming temperature is the major reason behind decreased soil moisture although precipitation is in slightly decreasing tendency. Season variations of soil moisture and related implications for hydro-meteorological processes in the subtropical and tropical river basins over the globe should arouse considerable human concerns.

Influence of soil conditions on dissolved organic matter leached from forest and wetland soils: a controlled growth chamber study.

PubMed

Kim, Eun-Ah; Nguyen, Hang Vo-Minh; Oh, Hae Sung; Hur, Jin; Choi, Jung Hyun

2016-03-01

This study investigated the effects of various soil conditions, including drying-rewetting, nitrogen deposition, and temperature rise, on the quantities and the composition of dissolved organic matter leached from forest and wetland soils. A set of forest and wetland soils with and without the nitrogen deposition were incubated in the growth chambers under three different temperatures. The moisture contents were kept constant, except for two-week drying intervals. Comparisons between the original and the treated samples revealed that drying-rewetting was a crucial environmental factor driving changes in the amount of dissolved organic carbon (DOC). The DOC was also notably increased by the nitrogen deposition to the dry forest soil and was affected by the temperature of the dry wetland soil. A parallel factor (PARAFAC) analysis identified three sub-fractions of the fluorescent dissolved organic matter (FDOM) from the fluorescence excitation-emission matrices (EEMs), and their compositions depended on drying-rewetting. The data as a whole, including the DOC and PARAFAC components and other optical indices, were possibly explained by the two main variables, which were closely related with the PARAFAC components and DOC based on principal component analysis (PCA). Our results suggested that the DOC and PARAFAC component information could provide a comprehensive interpretation of the changes in the soil-leached DOM in response to the different environmental conditions.

Potassium ferrate [Fe(VI)] does not mediate self-sterilization of a surrogate Mars soil.

PubMed

Crawford, Ronald L; Paszczynski, Andrzej; Allenbach, Lisa

2003-03-06

Martian soil is thought to be enriched with strong oxidants such as peroxides and/or iron in high oxidation states that might destroy biological materials. There is also a high flux of ultraviolet radiation at the surface of Mars. Thus, Mars may be inhospitable to life as we know it on Earth. We examined the hypothesis that if the soil of Mars contains ferrates [Fe(VI)], the strongest of the proposed oxidizing species, and also is exposed to high fluxes of UV radiation, it will be self-sterilizing. Under ambient conditions (25 degrees C, oxygen and water present) K2FeO4 mixed into sand mineralized some reactive organic molecules to CO2, while less reactive compounds were not degraded. Dried endospores of Bacillus subtilis incubated in a Mars surrogate soil comprised of dry silica sand containing 20% by weight K2FeO4 and under conditions similar to those now on Mars (extreme desiccation, cold, and a CO2-dominated atmosphere) were resistant to killing by the ferrate-enriched sand. Similar results were observed with permanganate. Spores in oxidant-enriched sand exposed to high fluxes of UV light were protected from the sporocidal activity of the radiation below about 5 mm depths. Based on our data and previously published descriptions of ancient but dormant life forms on Earth, we suggest that if entities resembling bacterial endospores were produced at some point by life forms on Mars, they might still be present and viable, given appropriate germination conditions. Endospores delivered to Mars on spacecraft would possibly survive and potentially compromise life detection experiments.

A new perspective on the 1930s mega-heat waves across central United States

NASA Astrophysics Data System (ADS)

Cowan, Tim; Hegerl, Gabi

2016-04-01

The unprecedented hot and dry conditions that plagued contiguous United States during the 1930s caused widespread devastation for many local communities and severely dented the emerging economy. The heat extremes experienced during the aptly named Dust Bowl decade were not isolated incidences, but part of a tendency towards warm summers over the central United States in the early 1930s, and peaked in the boreal summer 1936. Using high-quality daily maximum and minimum temperature observations from more than 880 Global Historical Climate Network stations across the United States and southern Canada, we assess the record breaking heat waves in the 1930s Dust Bowl decade. A comparison is made to more recent heat waves that have occurred during the latter half of the 20th century (i.e., in a warming world), both averaged over selected years and across decades. We further test the ability of coupled climate models to simulate mega-heat waves (i.e. most extreme events) across the United States in a pre-industrial climate without the impact of any long-term anthropogenic warming. Well-established heat wave metrics based on the temperature percentile threshold exceedances over three or more consecutive days are used to describe variations in the frequency, duration, amplitude and timing of the events. Casual factors such as drought severity/soil moisture deficits in the lead up to the heat waves (interannual), as well as the concurrent synoptic conditions (interdiurnal) and variability in Pacific and Atlantic sea surface temperatures (decadal) are also investigated. Results suggest that while each heat wave summer in the 1930s exhibited quite unique characteristics in terms of their timing, duration, amplitude, and regional clustering, a common factor in the Dust Bowl decade was the high number of consecutive dry seasons, as measured by drought indicators such as the Palmer Drought Severity and Standardised Precipitation indices, that preceded the mega-heat waves. This suggests that land surface feedbacks, resulting from anomalously dry soil prior to summer, amplified the heat extremes triggering the mega-heat waves. Using the model experiments, we assess whether the combined warm phases of the Pacific Decadal Oscillation and Atlantic Multidecadal Oscillation provide a necessary condition to trigger decade-long droughts that spawn mega-heat waves to cluster across consecutive summers.

Assessing five evolving microbial enzyme models against field measurements from a semiarid savannah—What are the mechanisms of soil respiration pulses?

NASA Astrophysics Data System (ADS)

Zhang, Xia; Niu, Guo-Yue; Elshall, Ahmed S.; Ye, Ming; Barron-Gafford, Greg A.; Pavao-Zuckerman, Mitch

2014-09-01

Soil microbial respiration pulses in response to episodic rainfall pulses (the "Birch effect") are poorly understood. We developed and assessed five evolving microbial enzyme models against field measurements from a semiarid savannah characterized by pulsed precipitation to understand the mechanisms to generate the Birch pulses. The five models evolve from an existing four-carbon (C) pool model to models with additional C pools and explicit representations of soil moisture controls on C degradation and microbial uptake rates. Assessing the models using techniques of model selection and model averaging suggests that models with additional C pools for accumulation of degraded C in the dry zone of the soil pore space result in a higher probability of reproducing the observed Birch pulses. Degraded C accumulated in dry soil pores during dry periods becomes immediately accessible to microbes in response to rainstorms, providing a major mechanism to generate respiration pulses. Explicitly representing the transition of degraded C and enzymes between dry and wet soil pores in response to soil moisture changes and soil moisture controls on C degradation and microbial uptake rates improve the models' efficiency and robustness in simulating the Birch effect. Assuming that enzymes in the dry soil pores facilitate degradation of complex C during dry periods (though at a lower rate) results in a greater accumulation of degraded C and thus further improves the models' performance. However, the actual mechanism inducing the greater accumulation of labile C needs further experimental studies.

The Effect of Drying-Wetting Cycle’s Repetition to the Characteristic of Natural and Stabilization Residual Soils Jawa Timur - Indonesia

NASA Astrophysics Data System (ADS)

Muntaha, M.

2017-11-01

Indonesia, which located in tropical region, continuously undergoes wetting and drying cycles due to the changeable seasons. An important role in activating the clay minerals on tropical residual soils is the main factor that affects the static and dynamic properties, such as: volume change, soil suction and dynamic modulus. The purpose of this paper is to evaluate the effect of drying-wetting cycles repetition on volume change, soil suction and mechanical characteristics of natural and stabilization of residual soils from Jawa Timur - Indonesia. The natural undisturbed and stabilized residual soil sample was naturally and gradually dried up with air to 25%, 50%, 75%, and 100 % of the initial water content. The wetting processes were carried out with the gradual increment water content of 25 %(wsat - wi), 50 %(wsat - wi), 75 %(wsat - wi), up to 100 %(wsat - wi). The Direct Shear test is used to measure the mechanic properties, and Whatman filter paper No. 42 is used to measure the soil suction. The drying-wetting processes were carried out for 1, 2, 4, and 6 cycles. The laboratory test results showed that, the void ratio decreased, the unit weight, cohesion and the internal friction angle were increasing due to stabilization. Drying-wetting cycle repetition reduces void ratio, negative pore-water pressure, cohesion and internal friction angle of natural and stabilized soils. Briefly, the decreased of mechanical soil properties was proven from the physical properties change observation.

Mass flow of a volatile organic liquid mixture in soils

DOE Office of Scientific and Technical Information (OSTI.GOV)

Gerstl, Z.; Galin, Ts.; Yaron, B.

1994-05-01

The flow of kerosene, a volatile organic liquid mixture (VOLM), was studied in loam and clay soils and in a medium sand. The kerosene residual capacity and conductivity were determined for all three media at different initial moisture contents and with kerosene of different compositions. The kerosene conductivity of the soil was found to be strongly influenced by the soil texture and initial moisture content as well as by the kerosene composition. The kerosene conductivity of the sand was two orders of magnitude greater than that of the soils and was unaffected by initial moisture contents as high as fieldmore » capacity. The kerosene conductivity of the loam soil was similar in oven dry and air dry soils, but increased significantly in soils at 70% and fun field capacity due to the Yuster effect. In the clay soil the kerosene conductivity of the air dry sod was four times that of the oven dry sod and increased somewhat in the soil at 70% field capacity. No kerosene flow was observed in the oven dry soil at full field capacity. The differences in kerosene conductivity in these soils and the effect of moisture content were attributed to the different pore-sin distributions of the soil& Changes in the composition of the kerosene due to volatilization of the light fractions resulted in increased viscosity of the residual kerosene. This increased viscosity affected the fluid properties of kerosene, which resulted in decreased kerosene conductivity in the sand and the soils. 29 refs., 4 figs., 4 tabs.« less

Seasonality of semi-arid and savanna-type ecosystems in an Earth system model

NASA Astrophysics Data System (ADS)

Dahlin, K.; Swenson, S. C.; Lombardozzi, D.; Kamoske, A.

2016-12-01

Recent work has identified semi-arid and savanna-type (SAST) ecosystems as a critical component of interannual variability in the Earth system (Poulter et al. 2014, Ahlström et al. 2015), yet our understanding of the spatial and temporal patterns present in these systems remains limited. There are three major factors that contribute to the complex behavior of SAST ecosystems, globally. First is leaf phenology, the timing of the appearance, presence, and senescence of plant leaves. Plants grow and drop their leaves in response to a variety of cues, including soil moisture, rainfall, day length, and relative humidity, and alternative phenological strategies might often co-exist in the same location. The second major factor in savannas is soil moisture. The complex nature of soil behavior under extremely dry, then extremely wet conditions is critical to our understanding of how savannas function. The third factor is fire. Globally, virtually all savanna-type ecosystems operate with some non-zero fire return interval. Here we compare model output from the Community Land Model (CLM5-BGC) in SAST regions to remotely sensed data on these three variables - phenology (MODIS LAI), soil moisture (SMAP), and fire (GFED4) - assessing both annual spatial patterns and intra-annual variability, which is critical in these highly variable systems. We present new SAST-specific first- and second-order benchmarks, including numbers of annual LAI peaks (often >1 in SAST systems) and correlations between soil moisture, LAI, and fire. Developing a better understanding of how plants respond to seasonal patterns is a critical first step in understanding how SAST ecosystems will respond to and influence climate under future scenarios.

Drought and Winter Drying (Pest Alert)

Treesearch

USDA Forest Service

Drought and winter drying have periodically caused major damage to trees. Drought reduces the amount of water available in the soil. In the case of winter drying, the water may be in the soil, but freezing of the soil makes the water unavailable to the tree. In both cases, more water is lost through transpiration than is available to the plant. Symptoms of drought and...

Design of dry sand soil stratified sampler

NASA Astrophysics Data System (ADS)

Li, Erkang; Chen, Wei; Feng, Xiao; Liao, Hongbo; Liang, Xiaodong

2018-04-01

This paper presents a design of a stratified sampler for dry sand soil, which can be used for stratified sampling of loose sand under certain conditions. Our group designed the mechanical structure of a portable, single - person, dry sandy soil stratified sampler. We have set up a mathematical model for the sampler. It lays the foundation for further development of design research.

Organochlorine pesticides and polychlorinated biphenyls in surface soils of Novi Sad and bank sediment of the Danube River.

PubMed

Skrbic, Biljana; Cvejanov, Jelena; Durisic-Mladenovic, Natasa

2007-01-01

The contents of 16 organochlorine pesticides (OCPs) and six so-called indicator polychlorinated biphenyls (PCBs) were determined in the surface zone (0-5 cm) of soil and sediment samples, taken from different locations in the city of Novi Sad, capitol of Vojvodina Province (North of the Serbia) covering residential and commercial area, recreational and arable zone. The total organochlorine pesticides concentration in soil varied from 2.63 to 31.78 ng g(-1) dry weight, while the level in sediment was 10.35 ng g(-1) dry weight. Maximum content of identified individual organochlorine pesticide in soil samples was 10.40 ng g(-1) dry weight for p, p-DDE in the market garden and 6.31 ng g(-1) dry weight for p, p'-DDT in sediment of the Danube River, although their application is restricted in Serbia. Some of investigated PCBs were identified only in the soil samples from a park-school backyard in the city downtown (0.32 ng g(-1) dry weight) and market garden (0.22 ng g(-1) dry weight), and also in sediment sample from left bank of the Danube River (0.41 ng g(-1) dry weight). Data of the OCPs and PCBs present in this study were compared with the ones found for soils and river sediments throughout the world, and with limit values set by soil and sediment quality guidelines. Also, correlation between the levels of certain pesticides and soil characteristics (organic matter, pH and clay content) was investigated.

Soil moisture-soil temperature interrelationships on a sandy-loam soil exposed to full sunlight

Treesearch

David A. Marquis

1967-01-01

In a study of birch regeneration in New Hampshire, soil moisture and temperature were found to be intimately related. Not only does low moisture lead to high temperature, but high temperature undoubtedly accelerates soil drying, setting up a vicious cycle of heating and drying that may prevent seed germination or kill seedlings.

Lanthanum toxicity to five different species of soil invertebrates in relation to availability in soil.

PubMed

Li, Jinxia; Verweij, Rudo A; van Gestel, Cornelis A M

2018-02-01

This study determined the toxicity of lanthanum, one of the most commonly used rare earth elements (REEs), to five representative soil invertebrates after 3-4 weeks exposure. Toxicity was related to total, 0.01 M CaCl 2 -extractable and porewater concentrations in the standard LUFA 2.2 soil, and for earthworms also to body concentrations. La sorption to LUFA 2.2 soil, estimated by relating total soil concentrations to CaCl 2 -extractable or porewater concentrations seemed to reach saturation at >1000 mg La/kg dry soil. Isopod (Porcellio scaber) growth was the most sensitive endpoint, followed by earthworm (Eisenia andrei), enchytraeid (Enchytraeus crypticus), springtail (Folsomia candida) and oribatid mite (Oppia nitens) reproduction, with EC 50 s of 312 (95% confidence interval: 5.6-619), 529 (295-762), 1010 ((>377 < 3133), 1220 (1180-1250) and 1500 (1250-1750) mg La/kg dry soil, respectively. EC 50 s related to CaCl 2 -extractable concentrations ranged between 1.3 (0.046-2.6) and 15.6 (5.6-25.7) mg La/kg dry soil, while porewater-based EC 50 s were 3.5 (-) and 10.2 (-) mg/L for the springtails and mites, respectively. La uptake in the earthworms linearly increased with increasing exposure concentration with bioaccumulation factors ranging between 0.04 and 0.53 (average ± SE: 0.24 ± 0.032). EC 50 for effects on earthworm reproduction related to internal concentrations was 184 (61-301) mg La/kg dry body weight. A risk assessment based on the available toxicity for soil invertebrates, bacteria and plants resulted in an HC 5 of approx. 50 mg La/kg dry soil, suggesting that La may affect soil ecosystems at concentrations slightly above natural background levels (6.6-50 mg La/kg dry soil) in non-polluted soils. Copyright © 2017 Elsevier Ltd. All rights reserved.

Ammonia Volatilization from Urea-Application Influenced Germination and Early Seedling Growth of Dry Direct-Seeded Rice

PubMed Central

Qi, Xiaoli; Wu, Wei; Shah, Farooq; Peng, Shaobing; Huang, Jianliang; Cui, Kehui; Liu, Hongyan; Nie, Lixiao

2012-01-01

Poor seed germination and early seedling growth associated with urea-induced soil ammonia volatilization are major constraints in the adoption of dry direct-seeded rice. To directly examine soil ammonia volatilization and its damage to seed germination and early seedling growth of dry direct-seeded rice when urea is applied at seeding, two Petri-dish incubation experiments and a field experiment were conducted. Ammonia volatilization due to urea application significantly reduced seed germination and early seedling growth of dry direct-seedling rice. NBPT significantly reduced ammonia volatilization following urea application. The application of ammonium sulfate, instead of urea at seeding, may mitigate poor crop establishment of dry direct-seeded rice. Root growth of dry direct-seeded rice was more seriously inhibited by soil ammonia volatilization than that of shoot. Results suggest that roots are more sensitive to soil ammonia toxicity than shoots in dry direct-seeded rice system when N is applied as urea at seeding. PMID:22454611

Response of respiration and nutrient availability to drying and rewetting in soil from a semi-arid woodland depends on vegetation patch and a recent wild fire

NASA Astrophysics Data System (ADS)

Sun, Q.; Meyer, W. S.; Koerber, G.; Marschner, P.

2015-06-01

Semi-arid woodlands, which are characterised by patchy vegetation interspersed with bare, open areas, are frequently exposed to wild fire. During summer, long dry periods are occasionally interrupted by rainfall events. It is well-known that rewetting of dry soil induces a flush of respiration. However, the magnitude of the flush may differ between vegetation patches and open areas because of different organic matter content which could be further modulated by wild fire. Soils were collected from under trees, under shrubs or in open areas in unburnt and burnt sandy Mallee woodland, where part of the woodland experienced a wild fire which destroyed or damaged most of the aboveground plant parts four months before sampling. In an incubation experiment, the soils were exposed to two moisture treatments: constantly moist (CM) and drying and rewetting (DRW). In CM, soils were incubated at 80% of maximum water holding capacity for 19 days; In DRW, soils were dried for four days, kept dry for another five days, then rewet to 80% WHC and maintained at this water content until day 19. Soil respiration decreased during drying and was very low in the dry period; rewetting induced a respiration flush. Compared to soil under shrubs and in open areas, cumulative respiration per g soil in CM and DRW was greater under trees, but lower when expressed per g TOC. Organic matter content, available P, and microbial biomass C, but not available N were greater under trees than in open areas. Wild fire decreased the flush of respiration per g TOC in the open areas and under shrubs, and reduced TOC and MBC concentrations only under trees, but had little effect on available N and P concentrations. We conclude that of the impact wild fire and DRW events on nutrient cycling differ among vegetation patches of a native semiarid woodland which is related to organic matter amount and availability.

Effect of repeated drying-wetting-freezing-thawing cycles on the active soil organic carbon pool

NASA Astrophysics Data System (ADS)

Semenov, V. M.; Kogut, B. M.; Lukin, S. M.

2014-04-01

Samples of soddy-podzolic soil (long-term overgrown fallow and continuous bare fallow), gray forest soil (forest, farming agrocenosis), and a typical chernozem (virgin steppe, forest area, farming agrocenosis, continuous bare fallow) have been incubated under stable conditions; other samples of these soils have been subjected to six drying-wetting-incubation-freezing-thawing-incubation cycles during 136 days. The wetting of dried soils and the thawing of frozen soils result in an abrupt but short increase in the emission rate of C-CO2 by 2.7-12.4 and 1.6-2.7 times, respectively, compared to the stable incubation conditions. As the soil is depleted in potentially mineralizable organic matter, the rate of the C-CO2 emission pulses initiated by disturbing impacts decreases. The cumulative extra production of C-CO2 by soils of natural lands for six cycles makes up 21-40% of that in the treatments with stable incubation conditions; the corresponding value for cultivated soils, including continuous clean fallow, is in the range of 45-82%. The content of potentially mineralizable organic matter in the soils subjected to recurrent drying-wetting-freezingthawing cycles decreased compared to the soils without disturbing impacts by 1.6-4.4 times, and the mineralization constants decreased by 1.9-3.6 times. It has been emphasized that the cumulative effect of drying-wetting-freezing-thawing cycles is manifested not only in the decrease in the total Corg from the soil but also in the reduction of the mineralization potential of the soil organic matter.

Degradation of Biochemical Activity in Soil Sterilized by Dry Heat and Gamma Radiation

NASA Technical Reports Server (NTRS)

Shih, K. L.; Souza, K. A.

1978-01-01

The effect of soil sterilization by dry heat (0.08% relative humidity), gamma radiation, or both on soil phosphatase, urease, and decarboxylase activity was studied. Soil sterilized by a long exposure to dry heat at relatively low temperatures (eight weeks at 100.5 C) retained higher activities than did soil exposed to a higher temperature (two weeks at 124.5 C), while all activity was destroyed by four days at 148.5 C. Sterilization with 7.5 Mrads destroyed less activity than did heat sterilization. The effect of several individually nonsterizing doses of heat radiation is described.

Rapid drying soils with microwave ovens.

DOT National Transportation Integrated Search

2002-07-01

Soils are normally dried in either a convection oven or stove. Inspections of field and laboratory moisture content testing indicated that the typical drying durations for a convection oven and stove were, 24 hours and 60 minutes, respectively. The o...

Effect of climatic conditions on the development of soil water repellency in soils treated with the wastewater of the olive oil production

NASA Astrophysics Data System (ADS)

Schaumann, Gabriele E.; Peikert, Benjamin; Tamimi, Nesreen; Steinmetz, Zacharias; Fischer, Jonas; Bibus, Daniel; Marei Sawalha, Amer; Dag, Arnon

2014-05-01

The disposal of untreated wastewater on soil can induce severe water repellency. The final degree of water repellency may strongly depend on the environmental conditions prevailing during and after disposal. Also unpolluted soil can develop severe water repellency upon exposure to extreme heat or draught events. The induced water repellency can be either persistent or of transient nature. However, the underlying mechanisms are not yet completely understood. The objective of this study was to investigate how climatic conditions determine the development and persistence of water repellency following wastewater disposal. Our hypothesis was that amphiphilic organic wastewater compounds physically sorb onto surfaces, which renders them hydrophobic. Depending on temperature and moisture, those compounds are degraded, chemically incorporated into SOM, or irreversibly sorbed to soil particles during the time after the first waste water-soil contact. According to our hypothesis, biological communities favor degradation and transformation of OM of waste water into SOM under moist soil conditions. This would reduce the initial hydrophobization. In contrast, drying irreversibly renders soil hydrophobic and phytotoxic due to immobilization of OMW OM in the soil. To test these hypotheses, we investigated effects of olive mil wastewater (OMW), the effluent originating from olive oil production, directly applied to soil. In Israel and Palastine, olive oil production generates large amounts of OMW within a short period of time between November and January. As sewage facilities do not accept OMW, it is often disposed onto soil, which leads to severe soil and groundwater pollution. If the above mentioned hypotheses match, pollution and hydrophobization might be minimized if the wastewater is discharged at the right time of the year. In order to test this, we conducted field (2-3 years) and laboratory (60 days) experiments in Israel (Gilat, arid climate) and in the West Bank (Bait Reema, Mediterranean climate) to assess the effect of climatic conditions during OMW application on the development of water repellency as a function of time. In the field experiments, OMW was applied to the soil in winter, spring, and summer, the latter with and without subsequent irrigation to keep the field moist for at least 6 weeks after OMW application. Most effects were strongest for the summer scenario without additional irrigation (field and lab) where the field effect persisted for at least 6 months. In contrast, summer application on moist soil only resulted in a slight and temporarily enhanced water repellency. Spring application induced a clearly less severe water repellency than summer application under dry conditions. Water repellency in the field developed more dramatically and with higher persistence in Gilat, which can be explained by its coarser soil texture but also by the more arid conditions. Repellency developed gradually during the hot summer time following OMW application in spring and summer plots and in the summer scenario of the lab incubation experiments, suggesting a contribution of abiotic processes inducing repellency. The results clearly show that extreme heat and/or drought may induce persistent water repellency and that abiotic and physicochemical mechanisms including drought-induced, irreversible sorption of amphiphilic substances to soil particles are capable to render water repellency persistent.

Future dryness in the southwest US and the hydrology of the early 21st century drought

PubMed Central

Cayan, Daniel R.; Das, Tapash; Pierce, David W.; Barnett, Tim P.; Tyree, Mary; Gershunov, Alexander

2010-01-01

Recently the Southwest has experienced a spate of dryness, which presents a challenge to the sustainability of current water use by human and natural systems in the region. In the Colorado River Basin, the early 21st century drought has been the most extreme in over a century of Colorado River flows, and might occur in any given century with probability of only 60%. However, hydrological model runs from downscaled Intergovernmental Panel on Climate Change Fourth Assessment climate change simulations suggest that the region is likely to become drier and experience more severe droughts than this. In the latter half of the 21st century the models produced considerably greater drought activity, particularly in the Colorado River Basin, as judged from soil moisture anomalies and other hydrological measures. As in the historical record, most of the simulated extreme droughts build up and persist over many years. Durations of depleted soil moisture over the historical record ranged from 4 to 10 years, but in the 21st century simulations, some of the dry events persisted for 12 years or more. Summers during the observed early 21st century drought were remarkably warm, a feature also evident in many simulated droughts of the 21st century. These severe future droughts are aggravated by enhanced, globally warmed temperatures that reduce spring snowpack and late spring and summer soil moisture. As the climate continues to warm and soil moisture deficits accumulate beyond historical levels, the model simulations suggest that sustaining water supplies in parts of the Southwest will be a challenge. PMID:21149687

Future dryness in the Southwest US and the hydrology of the early 21st century drought

USGS Publications Warehouse

Cayan, D.R.; Das, T.; Pierce, D.W.; Barnett, T.P.; Tyree, Mary; Gershunova, A.

2010-01-01

Recently the Southwest has experienced a spate of dryness, which presents a challenge to the sustainability of current water use by human and natural systems in the region. In the Colorado River Basin, the early 21st century drought has been the most extreme in over a century of Colorado River flows, and might occur in any given century with probability of only 60%. However, hydrological model runs from downscaled Intergovernmental Panel on Climate Change Fourth Assessment climate change simulations suggest that the region is likely to become drier and experience more severe droughts than this. In the latter half of the 21st century the models produced considerably greater drought activity, particularly in the Colorado River Basin, as judged from soil moisture anomalies and other hydrological measures. As in the historical record, most of the simulated extreme droughts build up and persist over many years. Durations of depleted soil moisture over the historical record ranged from 4 to 10 years, but in the 21st century simulations, some of the dry events persisted for 12 years or more. Summers during the observed early 21st century drought were remarkably warm, a feature also evident in many simulated droughts of the 21st century. These severe future droughts are aggravated by enhanced, globally warmed temperatures that reduce spring snowpack and late spring and summer soil moisture. As the climate continues to warm and soil moisture deficits accumulate beyond historical levels, the model simulations suggest that sustaining water supplies in parts of the Southwest will be a challenge.

Convergence of microbial assimilations of soil carbon, nitrogen, phosphorus, and sulfur in terrestrial ecosystems

DOE PAGES

Xu, Xiaofeng; Hui, Dafeng; King, Anthony Wayne; ...

2015-11-27

How soil microbes assimilate carbon-C, nitrogen-N, phosphorus-P, and sulfur-S is fundamental for understanding nutrient cycling in terrestrial ecosystems. We compiled a global database of C, N, P, and S concentrations in soils and microbes and developed relationships between them by using a power function model. The C:N:P:S was estimated to be 287:17:1:0.8 for soils, and 42:6:1:0.4 for microbes. We found a convergence of the relationships between elements in soils and in soil microbial biomass across C, N, P, and S. The element concentrations in soil microbial biomass follow a homeostatic regulation curve with soil element concentrations across C, N, Pmore » and S, implying a unifying mechanism of microbial assimilating soil elements. This correlation explains the well-constrained C:N:P:S stoichiometry with a slightly larger variation in soils than in microbial biomass. Meanwhile, it is estimated that the minimum requirements of soil elements for soil microbes are 0.8 mmol C Kg –1 dry soil, 0.1 mmol N Kg –1 dry soil, 0.1 mmol P Kg –1 dry soil, and 0.1 mmol S Kg –1 dry soil, respectively. Lastly, these findings provide a mathematical explanation of element imbalance in soils and soil microbial biomass, and offer insights for incorporating microbial contribution to nutrient cycling into Earth system models.« less

Stochastic soil water balance under seasonal climates

PubMed Central

Feng, Xue; Porporato, Amilcare; Rodriguez-Iturbe, Ignacio

2015-01-01

The analysis of soil water partitioning in seasonally dry climates necessarily requires careful consideration of the periodic climatic forcing at the intra-annual timescale in addition to daily scale variabilities. Here, we introduce three new extensions to a stochastic soil moisture model which yields seasonal evolution of soil moisture and relevant hydrological fluxes. These approximations allow seasonal climatic forcings (e.g. rainfall and potential evapotranspiration) to be fully resolved, extending the analysis of soil water partitioning to account explicitly for the seasonal amplitude and the phase difference between the climatic forcings. The results provide accurate descriptions of probabilistic soil moisture dynamics under seasonal climates without requiring extensive numerical simulations. We also find that the transfer of soil moisture between the wet to the dry season is responsible for hysteresis in the hydrological response, showing asymmetrical trajectories in the mean soil moisture and in the transient Budyko's curves during the ‘dry-down‘ versus the ‘rewetting‘ phases of the year. Furthermore, in some dry climates where rainfall and potential evapotranspiration are in-phase, annual evapotranspiration can be shown to increase because of inter-seasonal soil moisture transfer, highlighting the importance of soil water storage in the seasonal context. PMID:25663808

Diagnosing the Nature of Land-Atmosphere Coupling During the 2006-7 Dry/Wet Extremes in the U. S. Southern Great Plains

NASA Technical Reports Server (NTRS)

Santanello, Joseph A.; Peters-Lidard, Christa D.; Kennedy, Aaron D.; Kumar, Sujay; Dong, Xiquan

2011-01-01

Land-atmosphere (L-A) interactions play a critical role in determining the diurnal evolution of land surface and planetary boundary layer (PBL) temperature and moisture states and fluxes. In turn, these interactions regulate the strength of the connection between surface moisture and precipitation in a coupled system. To address deficiencies in numerical weather prediction and climate models due to improper treatment of L-A interactions, recent studies have focused on development of diagnostics to quantify the strength and accuracy of the land-PBL coupling at the process-level. In this study, a diagnosis of the nature and impacts of local land-atmosphere coupling (LoCo) during dry and wet extreme conditions is presented using a combination of models and observations during the summers of2006-7 in the U.S. Southern Great Plains. Specifically, the Weather Research and Forecasting (WRF) model has been coupled to NASA's Land Information System (LIS), which provides a flexible and high resolution representation and initialization of land surface physics and states. A range of diagnostics exploring the links and feedbacks between soil moisture and precipitation are examined for the dry/wet regimes of this region, along with the behavior and accuracy of different land-PBL scheme couplings under these conditions. Results demonstrate how LoCo diagnostics can be applied to coupled model components in the context of their integrated impacts on the process-chain connecting the land surface to the PBL and support of hydrological anomalies.

Changing Summer Precipitation Pattern Alters Microbial Community Response to Fall Wet-up in a Mediterranean Soil

NASA Astrophysics Data System (ADS)

Barnard, R. L.; Osborne, C. A.; Firestone, M. K.

2014-12-01

The large soil CO2 efflux associated with rewetting dry soils after the dry summer period significantly contributes to the annual carbon budget of Mediterranean grasslands. Rapid reactivation of soil heterotrophic activity and a pulse of available carbon are both required to fuel the CO2 pulse. Better understanding of the effects of altered summer precipitation on the metabolic state of indigenous microorganisms may be important in predicting future changes in carbon cycling. Here, we investigated the effects of a controlled rewetting event on the soil CO2 efflux pulse and on the present (DNA-based) and potentially active (rRNA-based) soil bacterial and fungal communities in intact soil cores previously subjected to three different precipitation patterns over four months (full summer dry season, extended wet season, and absent dry season). Phylogenetic marker genes for bacteria (16S) and fungi (28S) were sequenced before and after rewetting, and the abundance of these genes and transcripts was measured. Even after having experienced markedly different antecedent water conditions, the potentially active bacterial communities showed a consistent wet-up response. Moreover, we found a significant positive relation between the extent of change in the structure of the potentially active bacterial community and the magnitude of the CO2 pulse upon rewetting dry soils. We suggest that the duration of severe dry conditions (predicted to change under future climate) is important in conditioning the response potential of the soil bacterial community to wet-up as well as in framing the magnitude of the associated CO2 pulse.

Changing precipitation pattern alters soil microbial community response to wet-up under a Mediterranean-type climate.

PubMed

Barnard, Romain L; Osborne, Catherine A; Firestone, Mary K

2015-03-17

A large soil CO2 pulse is associated with rewetting soils after the dry summer period under a Mediterranean-type climate, significantly contributing to grasslands' annual carbon budget. Rapid reactivation of soil heterotrophs and a pulse of available carbon are both required to fuel the CO2 pulse. Understanding of the effects of altered summer precipitation on the metabolic state of indigenous microorganisms may be important in predicting changes in carbon cycling. Here, we investigated the effects of extending winter rainfall into the normally dry summer period on soil microbial response to a controlled rewetting event, by following the present (DNA-based) and potentially active (rRNA-based) soil bacterial and fungal communities in intact soil cores (from a California annual grassland) previously subjected to three different precipitation patterns over 4 months (full summer dry season, extended wet season and absent dry season). Phylogenetic marker genes for bacteria and fungi were sequenced before and after rewetting, and the abundance of these genes and transcripts was measured. After having experienced markedly different antecedent water conditions, the potentially active bacterial communities showed a consistent wet-up response. We found a significant positive relation between the extent of change in the structure of the potentially active bacterial community and the magnitude of the CO2 pulse upon rewetting dry soils. We suggest that the duration of severe dry summer conditions characteristic of the Mediterranean climate is important in conditioning the response potential of the soil microbial community to wet-up as well as in framing the magnitude of the associated CO2 pulse.

The surface area of soil organic matter

USGS Publications Warehouse

Chiou, C.T.; Lee, J.-F.; Boyd, S.A.

1990-01-01

The previously reported surface area for soil organic matter (SOM) of 560-800 m2/g as determined by the ethylene glycol (EG) retention method was reexamined by the standard BET method based on nitrogen adsorption at liquid nitrogen temperature. Test samples consisted of two high organic content soils, a freeze-dried soil humic acid, and an oven-dried soil humic acid. The measured BET areas for these samples were less than 1 m2/g, except for the freeze-dried humic acid. The results suggest that surface adsorption of nonionic organic compounds by SOM is practically insignificant in comparison to uptake by partition. The discrepancy between the surface areas of SOM obtained by BET and EG methods was explained in terms of the 'free surface area' and the 'apparent surface area' associated with these measurements.The previously reported surface area for soil organic matter (SOM) of 560-800 m2/g as determined by the ethylene glycol (EG) retention method was reexamined by the standard BET method based on nitrogen adsorption at liquid nitrogen temperature. Test samples consisted of two high organic content soils, a freeze-dried soil humic acid, and an oven-dried soil humic acid. The measured BET areas for these samples were less than 1 m2/g, except for the freeze-dried humic acid. The results suggest that surface adsorption of nonionic organic compounds by SOM is practically insignificant in comparison to uptake by partition. The discrepancy between the surface areas of SOM obtained by BET and EG methods was explained in terms of the 'free surface area' and the 'apparent surface area' associated with these measurements.

Plant Water Uptake in Drying Soils1

PubMed Central

Lobet, Guillaume; Couvreur, Valentin; Meunier, Félicien; Javaux, Mathieu; Draye, Xavier

2014-01-01

Over the last decade, investigations on root water uptake have evolved toward a deeper integration of the soil and roots compartment properties, with the goal of improving our understanding of water acquisition from drying soils. This evolution parallels the increasing attention of agronomists to suboptimal crop production environments. Recent results have led to the description of root system architectures that might contribute to deep-water extraction or to water-saving strategies. In addition, the manipulation of root hydraulic properties would provide further opportunities to improve water uptake. However, modeling studies highlight the role of soil hydraulics in the control of water uptake in drying soil and call for integrative soil-plant system approaches. PMID:24515834

Effect of drying time, ambient temperature and pre-soaks on prion-infected tissue contamination levels on surgical stainless steel: concerns over prolonged transportation of instruments from theatre to central sterile service departments.

PubMed

Lipscomb, I P; Pinchin, H; Collin, R; Keevil, C W

2007-01-01

Iatrogenic transmission of prions through use of surgical instruments has been shown both experimentally and clinically. In addition, recent discoveries of prion protein accumulation in peripheral tissues such as appendix and muscle, and evidence suggesting human-to-human blood-borne transmission, have led to a concern that any residual soiling containing this agent may remain infectious even after sterile service processing. Removal of all proteinaceous material from surgical devices is extremely important for effective sterilization. This removal can be severely hampered if the contaminant is allowed to dry onto the instrument surface for any length of time. The current move to centralize sterile service centres and the inevitable lengthening of transport time between theatres and re-processing makes it necessary to minimize the amount of residual soiling adhering to an instrument before sterilization. This investigation simulates the period between the application of surgical instruments in theatre and their initial pre-wash by a washer/disinfector. The aim was to investigate the kinetics of drying at different temperatures, and the application of different commercially available pre-soak solutions in situ. The findings show that all pre-soaks significantly reduce (by up to 96%) the prion-infected tissue contamination, and that controlling the temperature whilst in transit between theatres and cleaning facilities may allow an increase in time before high protein adsorption levels occur.

Effect of dry spells and soil cracking on runoff generation in a semiarid micro watershed under land use change

NASA Astrophysics Data System (ADS)

dos Santos, Julio Cesar Neves; de Andrade, Eunice Maia; Guerreiro, Maria João Simas; Medeiros, Pedro Henrique Augusto; de Queiroz Palácio, Helba Araújo; de Araújo Neto, José Ribeiro

2016-10-01

Soil and water resources effective management and planning in a river basin rely on understanding of runoff generation processes, yield, and their relations to rainfall. This study analyzes the effects of antecedent soil moisture in an expansive soil and the influence of dry spells on soil cracking, runoff generation and yield in a semiarid tropical region in Brazil subject to land use change. Data were collected from 2009 to 2013 in a 2.8 ha watershed, totaling 179 natural rainfall events. In the first year of study (2009), the watershed maintained a typical dry tropical forest cover (arboreal-shrub Caatinga cover). Before the beginning of the second year of study, gamba grass (Andropogon gayanus Kunth) was cultivated after slash and burn of native vegetation. Gamba grass land use was maintained for the rest of the monitoring period. The occurrence of dry spells and the formation of cracks in the Vertisol soil were the most important factors controlling flow generation. Dry spells promoted crack formation in the expansive soil, which acted as preferential flow paths leading to high initial abstractions: average conditions for runoff to be generated included soil moisture content above 20%, rainfall above 70 mm, I30max above 60 mm h-1 and five continuous dry days at the most. The change of vegetation cover in the second year of study did not alter significantly the overall conditions for runoff initiation, showing similar cumulative flow vs. rainfall response, implying that soil conditions, such as humidity and cracks, best explain the flow generation process on the semiarid micro-scale watershed with Vertisol soil.

Drying shrinkage problems in high PI subgrade soils.

DOT National Transportation Integrated Search

2014-01-01

The main objective of this study was to investigate the longitudinal cracking in pavements due to drying : shrinkage of high PI subgrade soils. The study involved laboartory soil testing and modeling. The : shrinkage cracks usually occur within the v...

SMALT - Soil Moisture from Altimetry project

NASA Astrophysics Data System (ADS)

Smith, Richard; Benveniste, Jérôme; Dinardo, Salvatore; Lucas, Bruno Manuel; Berry, Philippa; Wagner, Wolfgang; Hahn, Sebastian; Egido, Alejandro

Soil surface moisture is a key scientific parameter; however, it is extremely difficult to measure remotely, particularly in arid and semi-arid terrain. This paper outlines the development of a novel methodology to generate soil moisture estimates in these regions from multi-mission satellite radar altimetry. Key to this approach is the development of detailed DRy Earth ModelS (DREAMS), which encapsulate the detailed and intricate surface brightness variations over the Earth’s land surface, resulting from changes in surface roughness and composition. DREAMS have been created over a number of arid and semi-arid deserts worldwide to produce historical SMALT timeseries over soil moisture variation. These products are available in two formats - a high resolution track product which utilises the altimeter’s high frequency content alongtrack and a multi-looked 6” gridded product at facilitate easy comparison/integeration with other remote sensing techniques. An overview of the SMALT processing scheme, covering the progression of the data from altimeter sigma0 through to final soil moisture estimate, is included along with example SMALT products. Validation has been performed over a number of deserts by comparing SMALT products with other remote sensing techniques, results of the comparison between SMALT and Metop Warp 5.5 are presented here. Comparisons with other remote sensing techniques have been limited in scope due to differences in the operational aspects of the instruments, the restricted geographical coverage of the DREAMS and the low repeat temporal sampling rate of the altimeter. The potential to expand the SMALT technique into less arid areas has been investigated. Small-scale comparison with in-situ and GNSS-R data obtained by the LEiMON experimental campaign over Tuscany, where historical trends exist within both SMALT and SMC probe datasets. A qualitative analysis of unexpected backscatter characteristics in dedicated dry environments is performed with comparison between Metop ASCAT and altimeter sigma0 over Saharan Africa. Geographical correlated areas of agreement and disagreement corresponding to underlying terrain are identified. SMALT products provide a first order estimation of soil moisture in areas of very dry terrain, where other datasets are limited. Potential to improve and expand the technique has been found, although further work is required to produce products with the same accuracy confidence as more established techniques. The data are made freely available to the scientific community through the website http://tethys.eaprs.cse.dmu.ac.uk/SMALT

SMALT - Soil Moisture from Altimetry

NASA Astrophysics Data System (ADS)

Smith, Richard; Salloway, Mark; Berry, Philippa; Hahn, Sebastian; Wagner, Wolfgang; Egido, Alejandro; Dinardo, Salvatore; Lucas, Bruno Manuel; Benveniste, Jerome

2014-05-01

Soil surface moisture is a key scientific parameter; however, it is extremely difficult to measure remotely, particularly in arid and semi-arid terrain. This paper outlines the development of a novel methodology to generate soil moisture estimates in these regions from multi-mission satellite radar altimetry. Key to this approach is the development of detailed DRy Earth ModelS (DREAMS), which encapsulate the detailed and intricate surface brightness variations over the Earth's land surface, resulting from changes in surface roughness and composition. DREAMS have been created over a number of arid and semi-arid deserts worldwide to produce historical SMALT timeseries over soil moisture variation. These products are available in two formats - a high resolution track product which utilises the altimeter's high frequency content alongtrack and a multi-looked 6" gridded product at facilitate easy comparison/integeration with other remote sensing techniques. An overview of the SMALT processing scheme, covering the progression of the data from altimeter sigma0 through to final soil moisture estimate, is included along with example SMALT products. Validation has been performed over a number of deserts by comparing SMALT products with other remote sensing techniques, results of the comparison between SMALT and Metop Warp 5.5 are presented here. Comparisons with other remote sensing techniques have been limited in scope due to differences in the operational aspects of the instruments, the restricted geographical coverage of the DREAMS and the low repeat temporal sampling rate of the altimeter. The potential to expand the SMALT technique into less arid areas has been investigated. Small-scale comparison with in-situ and GNSS-R data obtained by the LEiMON experimental campaign over Tuscany, where historical trends exist within both SMALT and SMC probe datasets. A qualitative analysis of unexpected backscatter characteristics in dedicated dry environments is performed with comparison between Metop ASCAT and altimeter sigma0 over Saharan Africa. Geographical correlated areas of agreement and disagreement corresponding to underlying terrain are identified. SMALT products provide a first order estimation of soil moisture in areas of very dry terrain, where other datasets are limited. Potential to improve and expand the technique has been found, although further work is required to produce products with the same accuracy confidence as more established techniques. The data are made freely available to the scientific community through the website http://tethys.eaprs.cse.dmu.ac.uk/SMALT

Effects of the Application of Digestates from Wet and Dry Anaerobic Fermentation to Japanese Paddy and Upland Soils on Short-Term Nitrification

PubMed Central

Sawada, Kozue; Toyota, Koki

2015-01-01

Wet and dry anaerobic fermentation processes are operated for biogas production from organic matter, resulting in wet and dry digestates as by-products, respectively. The application of these digestates to soil as fertilizer has increased in recent years. Therefore, we herein compared the effects of applying wet digestates (pH 8.2, C/N ratio 4.5), dry digestates (pH 8.8, C/N ratio 23.4), and a chemical fertilizer to Japanese paddy and upland soils on short-term nitrification under laboratory aerobic conditions. Chloroform-labile C, an indicator of microbial biomass, was only minimally affected by these applications, indicating that a small amount of labile N was immobilized by microbes. All applications led to rapid increases in NO3 -N contents in both soils, and ammonia-oxidizing bacteria, but not archaea may play a critical role in net nitrification in the amended soils. The net nitrification rates for both soils were the highest after the application of dry digestates, followed by wet digestates and then the chemical fertilizer in order of decreasing soil pH. These results suggest that the immediate effects of applying digestates, especially dry digestates with the highest pH, on nitrate leaching need to be considered when digestates are used as alternative fertilizers. PMID:25740173

Effects of the application of digestates from wet and dry anaerobic fermentation to Japanese paddy and upland soils on short-term nitrification.

PubMed

Sawada, Kozue; Toyota, Koki

2015-01-01

Wet and dry anaerobic fermentation processes are operated for biogas production from organic matter, resulting in wet and dry digestates as by-products, respectively. The application of these digestates to soil as fertilizer has increased in recent years. Therefore, we herein compared the effects of applying wet digestates (pH 8.2, C/N ratio 4.5), dry digestates (pH 8.8, C/N ratio 23.4), and a chemical fertilizer to Japanese paddy and upland soils on short-term nitrification under laboratory aerobic conditions. Chloroform-labile C, an indicator of microbial biomass, was only minimally affected by these applications, indicating that a small amount of labile N was immobilized by microbes. All applications led to rapid increases in NO3 -N contents in both soils, and ammonia-oxidizing bacteria, but not archaea may play a critical role in net nitrification in the amended soils. The net nitrification rates for both soils were the highest after the application of dry digestates, followed by wet digestates and then the chemical fertilizer in order of decreasing soil pH. These results suggest that the immediate effects of applying digestates, especially dry digestates with the highest pH, on nitrate leaching need to be considered when digestates are used as alternative fertilizers.

Do drying and rewetting cycles modulate effects of sulfadiazine spiked manure in soil?

PubMed

Jechalke, Sven; Radl, Viviane; Schloter, Michael; Heuer, Holger; Smalla, Kornelia

2016-05-01

Naturally occurring drying-rewetting events in soil have been shown to affect the dissipation of veterinary antibiotics entering soil by manure fertilization. However, knowledge of effects on the soil microbial community structure and resistome is scarce. Here, consequences of drying-rewetting cycles on effects of sulfadiazine (SDZ) in soil planted with Dactylis glomerata L. were investigated in microcosms. Manure containing SDZ or not was applied to the pregrown grass and incubated for 56 days in a climate chamber. Water was either added daily or reduced during two drying events of 7 days, each followed by a recovery phase. Total community DNA was analyzed to reveal the effects on the bacterial community structure and on the abundance of sul1, sul2, intI1 ,intI2, qacE+qacEΔ1, traN and korB genes relative to 16S rRNA genes. 16S rRNA gene-based DGGE fingerprints indicated that drying-rewetting cycles modulated the effects of SDZ on the bacterial community structure in the soil. Furthermore, the SDZ treatment increased the relative abundance of sulfonamide resistance and integrase genes compared to the control. However, this increase was not different between moisture regimes, indicating that drying-rewetting had only a negligible effect on the selection of the resistome by SDZ in the manured soil. © FEMS 2016. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

Mineralogy of Antarctica Dry Valley Soils: Implications for Pedogenic Processes on Mars

NASA Technical Reports Server (NTRS)

Quinn, J. E.; Ming, D. W.; Morris, R. V.; Douglas, S.; Kounaves, S. P.; McKay, C. P.; Tamppari, L, K.; Smith, P. H.; Zent, A. P.; Archer, P. D., Jr.

2010-01-01

The Antarctic Dry Valleys (ADVs) located in the Transantarctic Mountains are the coldest and driest locations on Earth. The mean annual air temperature is -20 C or less and the ADVs receive 100mm or less of precipitation annually in the form of snow. The cold and dry climate in the ADVs is one of the best terrestrial analogs for the climatic conditions on Mars [2]. The soils in the ADVs have been categorized into three soil moisture zones: subxerous, xerous and ultraxerous. The subxerous zone is a coastal region in which soils have ice-cemented permafrost relatively close to the surface. Moisture is available in relatively large amounts and soil temperatures are above freezing throughout the soil profile (above ice permafrost) in summer months. The xerous zone, the most widespread of the three zones, is an inland region with a climate midway between the subxerous and ultraxerous. The soils from this zone have dry permafrost at moderate depths (30-75cm) but have sufficient water in the upper soil horizons to allow leaching of soluble materials. The ultraxerous zone is a high elevation zone, where both temperature and precipitation amounts are very low resulting in dry permafrost throughout the soil profile. The three moisture regime regions are similar to the three microclimatic zones (coastal thaw, inland mixed, stable upland) defined by Marchant and Head.

Hydrologic regime controls soil phosphorus fluxes in restoration and undisturbed wetlands

USGS Publications Warehouse

Aldous, A.; McCormick, P.; Ferguson, C.; Graham, S.; Craft, C.

2005-01-01

Many wetland restoration projects occur on former agricultural soils that have a history of disturbance and fertilization, making them prone to phosphorus (P) release upon flooding. To study the relationship between P release and hydrologic regime, we collected soil cores from three restoration wetlands and three undisturbed wetlands around Upper Klamath Lake in southern Oregon, U.S.A. Soil cores were subjected to one of three hydrologic regimes - flooded, moist, and dry - for 7.5 weeks, and P fluxes were measured upon reflooding. Soils from restoration wetlands released P upon reflooding regardless of the hydrologic regime, with the greatest releases coming from soils that had been flooded or dried. Undisturbed wetland soils released P only after drying. Patterns in P release can be explained by a combination of physical and biological processes, including the release of iron-bound P due to anoxia in the flooded treatment and the mineralization of organic P under aerobic conditions in the dry treatment. Higher rates of soil P release from restoration wetland soils, particularly under flooded conditions, were associated with higher total P concentrations compared with undisturbed wetland soils. We conclude that maintaining moist soil is the means to minimize P release from recently flooded wetland soils. Alternatively, prolonged flooding provides a means of liberating excess labile P from former agricultural soils while minimizing continued organic P mineralization and soil subsidence. ?? 2005 Society for Ecological Restoration International.

Impact of Optimized land Surface Parameters on the Land-Atmosphere Coupling in WRF Simulations of Dry and Wet Extremes

NASA Technical Reports Server (NTRS)

Kumar, Sujay; Santanello, Joseph; Peters-Lidard, Christa; Harrison, Ken

2011-01-01

Land-atmosphere (L-A) interactions play a critical role in determining the diurnal evolution of both planetary boundary layer (PBL) and land surface temperature and moisture budgets, as well as controlling feedbacks with clouds and precipitation that lead to the persistence of dry and wet regimes. Recent efforts to quantify the strength of L-A coupling in prediction models have produced diagnostics that integrate across both the land and PBL components of the system. In this study, we examine the impact of improved specification of land surface states, anomalies, and fluxes on coupled WRF forecasts during the summers of extreme dry (2006) and wet (2007) conditions in the U.S. Southern Great Plains. The improved land initialization and surface flux parameterizations are obtained through the use of a new optimization and uncertainty module in NASA's Land Information System (LIS-OPT), whereby parameter sets are calibrated in the Noah land surface model and classified according to the land cover and soil type mapping of the observations and the full domain. The impact of the calibrated parameters on the a) spin up of land surface states used as initial conditions, and b) heat and moisture fluxes of the coupled (LIS-WRF) simulations are then assessed in terms of ambient weather, PBL budgets, and precipitation along with L-A coupling diagnostics. In addition, the sensitivity of this approach to the period of calibration (dry, wet, normal) is investigated. Finally, tradeoffs of computational tractability and scientific validity (e.g.,. relating to the representation of the spatial dependence of parameters) and the feasibility of calibrating to multiple observational datasets are also discussed.

Diagnosing the Nature of Land-Atmosphere Coupling: A Case Study of Dry/Wet Extremes in the U. S. Southern Great Plains

NASA Technical Reports Server (NTRS)

Santanello, Joseph A. Jr.; Peters-Lidard, Christa D.; Kennedy, Aaron; Kumar, Sujay V.

2012-01-01

Land-atmosphere (L-A) interactions play a critical role in determining the diurnal evolution of land surface and planetary boundary layer (PBL) temperature and moisture states and fluxes. In turn, these interactions regulate the strength of the connection between surface moisture and precipitation in a coupled system. To address model deficiencies, recent studies have focused on development of diagnostics to quantify the strength and accuracy of the land- PBL coupling at the process-level. In this paper, a diagnosis of the nature and impacts of local land-atmosphere coupling (LoCo) during dry and wet extreme conditions is presented using a combination of models and observations during the summers of 2006 and 2007 in the U.S. Southern Great Plains. A range of diagnostics exploring the links and feedbacks between soil moisture and precipitation are applied to the dry/wet regimes exhibited in this region, and in the process a thorough evaluation of nine different land-PBL scheme couplings is conducted under the umbrella of a high-resolution regional modeling testbed. Results show that the sign and magnitude of errors in land surface energy balance components are sensitive to the choice of land surface model, regime type, and running mode. In addition, LoCo diagnostics show that the sensitivity of L-A coupling is stronger towards the land during dry conditions, while the PBL scheme coupling becomes more important during the wet regime. Results also demonstrate how LoCo diagnostics can be applied to any modeling system (e.g. reanalysis products) in the context of their integrated impacts on the process-chain connecting the land surface to the PBL and in support of hydrological anomalies.

Diagnosing the Nature of Land-Atmosphere Coupling: A Case Study of Dry/Wet Extremes in the U.S. Southern Great Plains

NASA Technical Reports Server (NTRS)

Santanello, Joseph A., Jr.; Peters-Lidard, Christa D.; Kennedy, Aaron; Kumar, Sujay V.

2012-01-01

Land-atmosphere (L-A) interactions play a critical role in determining the diurnal evolution of land surface and planetary boundary layer (PBL) temperature and moisture states and fluxes. In turn, these interactions regulate the strength of the connection between surface moisture and precipitation in a coupled system. To address model deficiencies, recent studies have focused on development of diagnostics to quantify the strength and accuracy of the land-PBL coupling at the process level. In this paper, a diagnosis of the nature and impacts of local land-atmosphere coupling (LoCo) during dry and wet extreme conditions is presented using a combination of models and observations during the summers of 2006 and 2007 in the U.S. southern Great Plains. A range of diagnostics exploring the links and feedbacks between soil moisture and precipitation is applied to the dry/wet regimes exhibited in this region, and in the process, a thorough evaluation of nine different land-PBL scheme couplings is conducted under the umbrella of a high-resolution regional modeling test bed. Results show that the sign and magnitude of errors in land surface energy balance components are sensitive to the choice of land surface model, regime type, and running mode. In addition, LoCo diagnostics show that the sensitivity of L-A coupling is stronger toward the land during dry conditions, while the PBL scheme coupling becomes more important during the wet regime. Results also demonstrate how LoCo diagnostics can be applied to any modeling system (e.g., reanalysis products) in the context of their integrated impacts on the process chain connecting the land surface to the PBL and in support of hydrological anomalies.

Weathering and genesis of Soils from Ellsworth Mountains, East Antarctica

NASA Astrophysics Data System (ADS)

Karoline Delpupo Souza, Katia; Schaefer, Carlos Ernesto; Michel, Roberto; Monari, Julia; Machado, Vania

2015-04-01

Knowledge on Antarctic soils from the Ellsworth Mountains (EM) are patchy comparatively with Dry Valleys soils from the Transantartic Mountains, and could help understand the genesis of cryogenic soils under extreme dry, cold desert conditions. The EM are a slightly arcuate 350-km-long north-northwest-trending mountain chain is bordered on the west by the polar plateau of West Antarctica and on the east by Ronne Ice Shelf. The range is as much as 90 km wide and constitutes one of the largest areas of exposed bedrock in West Antarctica. The stratigraphic succession in the EM includes strata from Cambriam to Permian in age. The objective of this study is to analyze the properties of soils from EM in order to identify the main factors and processes involved in soil formation under cold desert conditions in Antarctica. The sampling design aimed to represent the different geological substrates (marble-clast conglomerate, graywacke, argillite, conglomerate, black shale, marble and quartzite) as well as altitudinal levels and landforms within the same substrate. We characterized soils from EM regarding their morphological, physics and chemical properties. Soil samples were air dried and passed through 2 mm sieves. After removal of water soluble salts, the samples were submitted to chemical and physical analyses such as: pH in water, potential acidity (H + Al), exchangeable bases, total organic carbon, electric conductivity, soil texture and color. The soils classify, for the most part, in weathering stages 1 to 2. Only in the upper parts of ridges were there traces of soils at weathering stage 3. This indicates that much of the present icefree topography has been overridden by ice within the last few hundred thousand years. Cryoturbation is a widespread phenomenon in this area resulting in intense cryoclastic weathering and patterned ground, forming sorted circles, stripes and gelifluxion lobes. The soil show low horizontation, discrete patches of salt on the surface, and salt crusts beneath the rock fragments. Despite of the low weathering stage of the soil, they have yellowish hue and high chroma values from influence by sulfide material. Boulders on moraines show staining, pitting, spalling, and some striations. All soil are alkaline in reaction, with pHs at the range between 7.5-9.2. Cryptogamic (lichens or mosses) crusts are absent, and the organic matter contents were invariably very low, ranging between 0.13 and 0.38%. Permafrost is continuous and occurs close to the surface, at between 5-15 cm down the top. The available P background is also very low (< 5.3 mg/kg), exchangeable K and Na levels are surprisingly low for Polar Desert soils. Soils are all skelletic, with a predominance of coarse materials. CEC is medium to high, and Ca-dominated, as a result of a strong limestone influence in the moraine parent materials. The main salts present are Ca and Na-sulphate forms, and less cloride forms, and clay sized materials are dominated by salts in all soils, especially below 5 cm depth.

What do Boletus, Chanterelle and Co. have in common with Eco engineering?

NASA Astrophysics Data System (ADS)

Graf, F.; Burri, K.; Böll, A.

2009-04-01

A major goal of eco engineering is its contribution to slope stability. The carefully selected plant and technical construction material are an indispensable requirement but not necessarily sufficient in view of long-term success. For that purpose, plant growth and the development of a functional vegetation cover are essential. However, particularly under extreme climatic and environmental conditions even pioneer plants reach their limits in bridging the gap between their proper needs and the effective yield of the soil degraded by erosion or sliding processes. Besides the conventional solutions that are the application of artificial fertiliser and soil conditioners, a competitive option is to be found in the "Kingdom of Fungi". Under natural conditions, as good as every plant species used in eco engineering lives in a symbiotic relationship with fungi, called mycorrhiza with Boletus and Chanterelle as two prominent representatives. Within these partnerships, the fungi take charge of the host's water and nutrient supply; considerably increasing its efficiency compared to non-mycorrhized roots. Consequently, plant growth, in particular root performance, and survival are significantly improved as is shown in a restoration experiment on an alpine ski slope in the Swiss mountains and has been demonstrated many times elsewhere. In addition to this indirect contribution to the restoration and re-stabilisation process, the mycorrhizal fungi provide more direct functions related to the development of a stable soil structure starting from a severely degraded soil material. The mycelia producing fungi assemble and stabilise micro- and macro-aggregates out of smallest organic and inorganic soil particles. The formation and stabilisation of the soil structure proceed at different spatial scales directly by electrostatic charge, adhesive and enmeshment mechanisms. Numerous investigations prove that, on the one hand, the sole application of mycorrhizal fungi to loose soil material may result in an increase of aggregate stability but, on the other hand, demonstrate its species specific dependency. Furthermore, mycorrhizal fungi support the soil aggregate stability by serving as a distribution vector for associated micro-organisms, mainly bacteria and archaea, some of them soil stabilising alike. A positive correlation was found between soil aggregate stability and dry unit weight, based on laboratory as well as field samples. Such a correlation is known for the shear strength parameters - particularly for the angle of internal friction Φ' - of the Mohr-Coulomb failure criterion on which most of the conventionally used models for soil and slope stability calculations are based. Moreover, evidence was provided that the aggregate stability of soil at low dry unit weight (~15.5 kN/m3) added with plants and mycorrhizal fungi corresponds to that of untreated soil material at high dry unit weight (~19.5 kN/m3) a feature found for the angle of internal friction Φ' too. Conclusively, based on these relationships, effects of plants and mycorrhizal fungi on soil stability may be interpreted as a virtual increase in dry unit weight and a real increase in the angle of internal friction Φ', respectively. The effect of plants and fungi on soil stability is, however, not restricted to withstand erosion and sliding processes induced by water. Recent experiments in a wind tunnel reveal the potential of this symbiosis related to wind erosion and, therefore, in view of combating desertification. Experiments with differently dense planted soil confirmed the negative correlation with the amount of sediment transport and health threatening fine dust (PM10) emission. The "mycorrhiza network" including and connecting plants, soil aggregate stability, and the angle of internal friction Φ' is of special meaning in view of soil stabilisation and the development of degraded soil. Carefully selected fungus-plant combinations shorten the delicate phase of re-colonisation and the development of a functional vegetation cover at simultaneous amelioration of the site specific conditions - representing the essential requirements for long-term success of eco engineering measures.

Subsurface valleys and geoarcheology of the Eastern Sahara revealed by shuttle radar

USGS Publications Warehouse

McCauley, J.F.; Schaber, G.G.; Breed, C.S.; Grolier, M.J.; Haynes, C.V.; Issawi, B.; Elachi, C.; Blom, R.

1982-01-01

The shuttle imaging radar (SIR-A) carried on the space shuttle Columbia in November 1981 penetrated the extremely dry Selima Sand Sheet, dunes, and drift sand of the eastern Sahara, revealing previously unknown buried valleys, geologic structures, and possible Stone Age occupation sites. Radar responses from bedrock and gravel surfaces beneath windblown sand several centimeters to possibly meters thick delineate sand- and alluvium-filled valleys, some nearly as wide as the Nile Valley and perhaps as old as middle Tertiary. The nov-vanished maijor river systems that carved these large valleys probably accomplished most of the erosional stripping of this extraordinarily flat, hyperarid region. Underfit and incised dry wadis, many superimposed on the large valleys, represent erosion by intermittent running water, probably during Quaternary pluvials. Stone Age artifacts associated with soils in the alluvium suggest that areas near the wadis may have been sites of early human occupation. The presence of old drainage networks beneath the sand sheet provides a geologic explanation for the locations of many playas and present-day oases which have been centers of episodic human habitation. Radar penetration of dry sand and soils varies with the wavelength of the incident signals (24 centimeters for the SIR-A system), incidence angle, and the electrical properties of the materials, which are largely determined by moisture content. The calculated depth of radar penetration of dry sand and granules, based on laboratory measurements of the electrical properties of samples from the Selima Sand Sheet, is at least 5 meters. Recent (September 1982) field studies in Egypt verified SIR-A signal penetration depths of at least 1 meter in the Selima Sand Sheet and in drift sand and 2 or more meters in sand dunes. Copyright ?? 1982 AAAS.

Hydrological Responses of Weather Conditions and Crop Change of Agricultural Area in the Rincon Valley, New Mexico

NASA Astrophysics Data System (ADS)

Ahn, S.; Sheng, Z.; Abudu, S.

2017-12-01

Hydrologic cycle of agricultural area has been changing due to the impacts of climate and land use changes (crop coverage changes) in an arid region of Rincon Valley, New Mexico. This study is to evaluate the impacts of weather condition and crop coverage change on hydrologic behavior of agricultural area in Rincon Valley (2,466km2) for agricultural watershed management using a watershed-scale hydrologic model, SWAT (Soil and Water Assessment Tool). The SWAT model was developed to incorporate irrigation of different crops using auto irrigation function. For the weather condition and crop coverage change evaluation, three spatial crop coverages including a normal (2008), wet (2009), and dry (2011) years were prepared using USDA crop data layer (CDL) for fourteen different crops. The SWAT model was calibrated for the period of 2001-2003 and validated for the period of 2004-2006 using daily-observed streamflow data. Scenario analysis was performed for wet and dry years based on the unique combinations of crop coverages and releases from Caballo Reservoir. The SWAT model simulated the present vertical water budget and horizontal water transfer considering irrigation practices in the Rincon Valley. Simulation results indicated the temporal and spatial variability for irrigation and non-irrigation seasons of hydrologic cycle in agricultural area in terms of surface runoff, evapotranspiration, infiltration, percolation, baseflow, soil moisture, and groundwater recharge. The water supply of the dry year could not fully cover whole irrigation period due to dry weather conditions, resulting in reduction of crop acreage. For extreme weather conditions, the temporal variation of water budget became robust, which requires careful irrigation management of the agricultural area. The results could provide guidelines for farmers to decide crop patterns in response to different weather conditions and water availability.

Cold adaptive traits revealed by comparative genomic analysis of the eurypsychrophile Rhodococcus sp. JG3 isolated from high elevation McMurdo Dry Valley permafrost, Antarctica.

PubMed

Goordial, Jacqueline; Raymond-Bouchard, Isabelle; Zolotarov, Yevgen; de Bethencourt, Luis; Ronholm, Jennifer; Shapiro, Nicole; Woyke, Tanja; Stromvik, Martina; Greer, Charles W; Bakermans, Corien; Whyte, Lyle

2016-02-01

The permafrost soils of the high elevation McMurdo Dry Valleys are the most cold, desiccating and oligotrophic on Earth. Rhodococcus sp. JG3 is one of very few bacterial isolates from Antarctic Dry Valley permafrost, and displays subzero growth down to -5°C. To understand how Rhodococcus sp. JG3 is able to survive extreme permafrost conditions and be metabolically active at subzero temperatures, we sequenced its genome and compared it to the genomes of 14 mesophilic rhodococci. Rhodococcus sp. JG3 possessed a higher copy number of genes for general stress response, UV protection and protection from cold shock, osmotic stress and oxidative stress. We characterized genome wide molecular adaptations to cold, and identified genes that had amino acid compositions favourable for increased flexibility and functionality at low temperatures. Rhodococcus sp. JG3 possesses multiple complimentary strategies which may enable its survival in some of the harshest permafrost on Earth. © FEMS 2015. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

Soil sorption of organic vapors and effects of humidity on sorptive mechanism and capacity

USGS Publications Warehouse

Chiou, C.T.; Shoup, T.D.

1985-01-01

Vapor sorption isotherms on dry Woodburn soil at 20-30??C were determined for benzene, chlorobenzene, p-dichlorobenzene, m-dichlorobenzene, 1,2,4-trichlorobenzene, and water as single vapors and for benzene, m-dichlorobenzene, and 1,2,4-trichlorobenzene as functions of relative humidity (RH). Isotherms for all compounds on dry soil samples are distinctively nonlinear, with water showing the greatest capacity. Water vapor sharply reduced the sorption capacities of organic compounds with the dry soil; on water-saturated soil, the reduction was about 2 orders of magnitude. The markedly higher sorption of organic vapors at subsaturation humidities is attributed to adsorption on the mineral matter, which predominates over the simultaneous uptake by partition into the organic matter. At about 90% RH, the sorption capacities of organic compounds become comparable to those in aqueous systems. The effect of humidity is attributed to adsorptive displacement by water of organics adsorbed on the mineral matter. A small residual uptake is attributed to the partition into the soil-organic phase that has been postulated in aqueous systems. The results are essentially in keeping with the model that was previously proposed for sorption on the soil from water and from organic solvents.Vapor sorption isotherms on dry Woodburn soil at 20-30 degree C were determined for benzene, chlorobenzene, p-dichlorobenzene, m-dichlorobenzene, 1,2,4-trichlorobenzene, and water as single vapors and for benzene, m-dichlorobenzene, and 1,2,4-trichlorobenzene as functions of relative humidity (RH). Isotherms for all compounds on dry soil samples are distinctively nonlinear, with water showing the greatest capacity. Water vapor sharply reduced the sorption capacities of organic compounds with the dry soil; on water-saturated soil, the reduction was about 2 orders of magnitude. The markedly higher sorption of organic vapors at subsaturation humidities is attributed to adsorption on the mineral matter. The results are essentially in keeping with the model that was previously proposed for sorption on the soil from water and from organic solvents.

Evaluating ESA CCI Soil Moisture in East Africa

NASA Technical Reports Server (NTRS)

McNally, Amy; Shukla, Shraddhanand; Arsenault, Kristi R.; Wang, Shugong; Peters-Lidard, Christa D.; Verdin, James P.

2016-01-01

To assess growing season conditions where ground based observations are limited or unavailable, food security and agricultural drought monitoring analysts rely on publicly available remotely sensed rainfall and vegetation greenness. There are also remotely sensed soil moisture observations from missions like the European Space Agency (ESA) Soil Moisture and Ocean Salinity (SMOS) and NASAs Soil Moisture Active Passive (SMAP), however these time series are still too short to conduct studies that demonstrate the utility of these data for operational applications, or to provide historical context for extreme wet or dry events. To promote the use of remotely sensed soil moisture in agricultural drought and food security monitoring, we use East Africa as a case study to evaluate the quality of a 30+ year time series of merged active-passive microwave soil moisture from the ESA Climate Change Initiative (CCI-SM). Compared to the Normalized Difference Vegetation index (NDVI) and modeled soil moisture products, we found substantial spatial and temporal gaps in the early part of the CCI-SM record, with adequate data coverage beginning in 1992. From this point forward, growing season CCI-SM anomalies were well correlated (R greater than 0.5) with modeled, seasonal soil moisture, and in some regions, NDVI. We use correlation analysis and qualitative comparisons at seasonal time scales to show that remotely sensed soil moisture can add information to a convergence of evidence framework that traditionally relies on rainfall and NDVI in moderately vegetated regions.

Recovery of severely compacted soils in the Mojave Desert, California, USA

USGS Publications Warehouse

Webb, R.H.

2002-01-01

Often as a result of large-scale military maneuvers in the past, many soils in the Mojave Desert are highly vulnerable to soil compaction, particularly when wet. Previous studies indicate that natural recovery of severely compacted desert soils is extremely slow, and some researchers have suggested that subsurface compaction may not recover. Poorly sorted soils, particularly those with a loamy sand texture, are most vulnerable to soil compaction, and these soils are the most common in alluvial fans of the Mojave Desert. Recovery of compacted soil is expected to vary as a function of precipitation amounts, wetting-and-drying cycles, freeze-thaw cycles, and bioturbation, particularly root growth. Compaction recovery, as estimated using penetration depth and bulk density, was measured at 19 sites with 32 site-time combinations, including the former World War II Army sites of Camps Ibis, Granite, Iron Mountain, Clipper, and Essex. Although compaction at these sites was caused by a wide variety of forces, ranging from human trampling to tank traffic, the data do not allow segregation of differences in recovery rates for different compaction forces. The recovery rate appears to be logarithmic, with the highest rate of change occurring in the first few decades following abandonment. Some higher-elevation sites have completely recovered from soil compaction after 70 years. Using a linear model of recovery, the full recovery time ranges from 92 to 100 years; using a logarithmic model, which asymptotically approaches full recovery, the time required for 85% recovery ranges from 105-124 years.

Does crop rotational diversity increase soil microbial resistance and resilience to drought and flooding?

NASA Astrophysics Data System (ADS)

Schnecker, Jörg; Calderon, Francisco; Cavigelli, Michel; Lehman, Michael; Tiemann, Lisa; Grandy, Stuart

2017-04-01

Future climate scenarios indicate more frequent and stronger extreme weather events. This includes more severe droughts but also an increase in heavy rain events and flooding. Agricultural systems are of special interest in this context because of their role in food security but also because of their potentially changing role in global carbon and nutrient cycling under these extreme conditions. Plant diversification strategies like more complex crop rotations which support more diverse soil microbial communities with higher functional redundancy might be more resistant to drought and flooding and could help to reduce impacts on microbial carbon and nutrient cycling. To test how crop diversification affects the response of soil microbial processes to drought and flooding and reoccurring drought and flooding, we manipulated water regimes in lab incubation experiments using soils from four long term rotation experiments across the USA, including a low (one or two crops) vs. high (>3 crops) diversity rotations at each site. The sites range from low precipitation (Colorado), over intermediate precipitation (Michigan and South Dakota) to high precipitation in Maryland. Replicate sets of samples were either allowed to dry out, were gradually flooded or kept at a constant water content (control). We monitored CO2 production during five stress cycles. Additionally, we determined microbial biomass, enzyme activities and N pools during the first and last stress cycle in soils from the precipitation extremes. After a total incubation length of 165 days and five stress cycles only the soils from short rotations in Maryland and South Dakota that had been subjected to reoccurring drought showed significantly less cumulative CO2 loss compared to their respective controls. All the other sites and rotation length did not significantly differ from control when subjected to reoccurring drought or flooding. A Principal component analysis using all measured parameters of Colorado and Maryland soils showed a clear clustering of samples by site and in case of Maryland also by rotation length before the first stress. During the stress, samples were significantly separated by the treatment (drought and flooding). Immediately after the stress, samples again clustered by site and rotation length. After four stress cycles, soils from the long rotation in Colorado were the only samples that did not show a significant response to the laboratory treatments anymore. Our results indicate that agricultural soils, irrespective of the climatic region they are from and the rotation regime, are highly susceptible to changes in water content, especially drought. We did however also found that all tested soils were quickly recovering from the applied stress treatment and that plant diversification might help to increase the microbial resistance to water stress in certain soil systems.

Arbuscular mycorrhizal fungi and associated microbial communities from dry grassland do not improve plant growth on abandoned field soil.

PubMed

Pánková, Hana; Lepinay, Clémentine; Rydlová, Jana; Voříšková, Alena; Janoušková, Martina; Dostálek, Tomáš; Münzbergová, Zuzana

2018-03-01

After abandonment of agricultural fields, some grassland plant species colonize these sites with a frequency equivalent to dry grasslands (generalists) while others are missing or underrepresented in abandoned fields (specialists). We aimed to understand the inability of specialists to spread on abandoned fields by exploring whether performance of generalists and specialists depended on soil abiotic and/or biotic legacy. We performed a greenhouse experiment with 12 species, six specialists and six generalists. The plants were grown in sterile soil from dry grassland or abandoned field inoculated with microbial communities from one or the other site. Plant growth, abundance of mycorrhizal structures and plant response to inoculation were evaluated. We focused on arbuscular mycorrhizal fungi (AMF), one of the most important parts of soil communities affecting plant performance. The abandoned field soil negatively affected plant growth, but positively affected plant response to inoculation. The AMF community from both sites differed in infectivity and taxa frequencies. The lower AMF taxa frequency in the dry grassland soil suggested a lack of functional complementarity. Despite the fact that dry grassland AMF produced more arbuscules, the dry grassland inoculum did not improve phosphorus nutrition of specialists contrary to the abandoned field inoculum. Inoculum origin did not affect phosphorus nutrition of generalists. The lower effectiveness of the dry grassland microbial community toward plant performance excludes its inoculation in the abandoned field soil as a solution to allow settlement of specialists. Still, the distinct response of specialists and generalists to inoculation suggested that they differ in AMF responsiveness.

Biochar in viticulture

NASA Astrophysics Data System (ADS)

Niggli, C.; Schmidt, H.-P.

2012-04-01

Viticulture is becoming the pioneering culture for biochar research. Biochar has been applied to many large-scale viticulture experiments across Europe this spring. After the first large-scale and long term experiments at the Delinat Institute in 2007-08, expectations are high. The latest results confirm these expectations and also show that only scientifically sound experiments will lead to conclusive information on the effect of biochar on vine growth and wine quality in many different climates and soil types. In the last three years it has been clearly shown that biologically activated biochar does not only have positive impact on soil-plant systems in the tropics, but in all soil types and climatic zones [Crane Droescher [2011], Ogawa [2010], IBI [2011]). While biochar improves water availability for plants and microorganisms in dry or seasonally dry farming areas, it also plays a substantial role in high rainfall zones because it improves nutrient dynamics through prevention of nutrient leaching. Spectacular crop growth can be seen in extreme climates (tropical or semi-desert), partly due to biochar's buffering capacity leading to the compensation of strong limiting factors (water in semi-deserts, washed-out nutrients in the tropics). In temperate climates, however, the achievable increase in harvest is lower as there are no extremely limiting elements which have to be compensated. In addition, potential maximum growth of many plant species is easily reached in temperate zones through using good fertilizers and careful seed selection. Therefore the advantage of biochar application in temperate climates is less evident as crop growth but rather is seen as plant quality improvement through optimizing plant nutrition. 1. Increase of plant resistance and hence reduction of plant protection products 2. Stimulation of soil microbial activity and symbioses between plants and soil organisms 3. Reduction in fertilizer use by optimizing the supply of nutrients, limiting nutrient losses 4. Improvement of taste and nutrient content of the crop 5. Improvement of shelf life 6. Reduction of greenhouse gas emissions and groundwater pollution Biochar is not a fertilizer, but rather a nutrient carrier and a habitat for microorganisms. If biochar is incorporated pure and without activation into the soil, its high adsorption capacity and increasing CEC will result in the absorption and fixing of available nutrients and water in the soil. This may lead to inhibition of plant growth, at least in the beginning (several months to a year), depending on the soil's nutrient content. Biochar needs to be charged to become biologically active in order to efficiently utilize its soil-enhancing properties. There are numerous methods of activating and producing substrates similar to terra preta aside from mixing biochar with compost. A new field experiment has been established in the vineyards of Delinat-Institute in 2011 to study the effects of biochar incorporation into compost preliminary to the composting process. Other field trials with manure-activated biochar were conducted this year by more than 15 companies in several major wine regions in Europe and first results have been evaluated.

Temporal variability of CO2 and N2O emissions in an agricultural long-term field trial regarding effects of different management practices and extreme weather effects

NASA Astrophysics Data System (ADS)

Koal, Philipp; Schilling, Rolf; Gerl, Georg; Pritsch, Karin; Munch, Jean Charles

2016-04-01

In order to achieve a reduction of greenhouse gas emissions, modern agronomic management practices need to be established. Therefore, to assess the effect of different farming practices on greenhouse gas emissions, reliable data are required. The experiment covers and compares main aspects of agricultural management for a better implementation of sustainable land use. The focus lies on the determination and interpretation of greenhouse gas emissions, where the effects of diverse tillage systems and fertilisation practices of an integrated farming system as well as the impacts of extreme weather conditions are observed. In addition, with analysis of the alterable biological, physical and chemical soil properties a link between the impact of different management systems on greenhouse gas emissions and the observed cycle of matter in the soil, especially the nitrogen and carbon cycle, is enabled. Measurements have been carried out on long-term field trials at the Research Farm Scheyern located in a Tertiary hilly landscape approximately 40 km north of Munich (South Germany). The long-term integrated farming system trial was started in 1992. Since then parcels of land (each around 0.2-0.4 ha) with a particular interior plot set-up have been conducted with the same crop rotation, tillage and fertilisation practice referring to integrated farming management. Thus, the management impacts on the soil of more than 20 years have been examined. Fluxes of CH4, N2O and CO2 have been monitored since 2007 for the integrated farming system trial using an automated system which consists of chambers (0.4 m2 area) with a motor-driven lid, an automated gas sampling unit, an on-line gas chromatographic analysis system, and a control and data logging unit. Precipitation and temperature data have been observed for the experimental field to include weather effects. The main outcomes are the analysis of temporal and spatial dynamics of greenhouse gas emissions influenced by management practice events (i.a. fertilisation, crop incorporation and tillage) and weather effects (drying-rewetting, freezing-thawing, intense rainfall and dry periods) and the creation of impact studies comparing the management practices (minimum tillage vs conventional tillage; high vs low fertilisation). Physical, chemical and biological soil properties (i.a. texture, mineral nitrogen, soil organic carbon and microbial biomass) have been examined in short time intervals to aggregate the parameters and processes influencing the greenhouse gas emissions and to build a linkage between soil organic matter and greenhouse gas emissions. Moreover, with the collected soil and agronomic data (harvest, tillage and fertilisation practices) the study contributes to a process quantification supporting modelling approaches.

Climate models predict increasing temperature variability in poor countries.

PubMed

Bathiany, Sebastian; Dakos, Vasilis; Scheffer, Marten; Lenton, Timothy M

2018-05-01

Extreme events such as heat waves are among the most challenging aspects of climate change for societies. We show that climate models consistently project increases in temperature variability in tropical countries over the coming decades, with the Amazon as a particular hotspot of concern. During the season with maximum insolation, temperature variability increases by ~15% per degree of global warming in Amazonia and Southern Africa and by up to 10%°C -1 in the Sahel, India, and Southeast Asia. Mechanisms include drying soils and shifts in atmospheric structure. Outside the tropics, temperature variability is projected to decrease on average because of a reduced meridional temperature gradient and sea-ice loss. The countries that have contributed least to climate change, and are most vulnerable to extreme events, are projected to experience the strongest increase in variability. These changes would therefore amplify the inequality associated with the impacts of a changing climate.

Climate models predict increasing temperature variability in poor countries

PubMed Central

Dakos, Vasilis; Scheffer, Marten

2018-01-01

Extreme events such as heat waves are among the most challenging aspects of climate change for societies. We show that climate models consistently project increases in temperature variability in tropical countries over the coming decades, with the Amazon as a particular hotspot of concern. During the season with maximum insolation, temperature variability increases by ~15% per degree of global warming in Amazonia and Southern Africa and by up to 10%°C−1 in the Sahel, India, and Southeast Asia. Mechanisms include drying soils and shifts in atmospheric structure. Outside the tropics, temperature variability is projected to decrease on average because of a reduced meridional temperature gradient and sea-ice loss. The countries that have contributed least to climate change, and are most vulnerable to extreme events, are projected to experience the strongest increase in variability. These changes would therefore amplify the inequality associated with the impacts of a changing climate. PMID:29732409

AIR DRYING AND PRETREATMENT EFFECTS ON SOIL SULFATE SORPTION

EPA Science Inventory

Drying, freezing, and refrigeration are commonly employed to facilitate the handling and storage of soil samples on which chemical, biological and physical analyses are to be performed. hese laboratory protocol have the potential to alter soil chemical characteristics and may res...

Arctic tundra and mountain landscapes are persistent sinks of atmospheric CH4

NASA Astrophysics Data System (ADS)

Christiansen, Jesper; Winkler, Renato; Juncher Jørgensen, Christian

2017-04-01

Recent studies have shown significant rates of net uptake of atmospheric methane (CH4) in Arctic tundra soils. Oxidation of CH4 in these cold, dry soils in the Arctic region can counteract CH4 emissions from wetlands and play a potential important role for the net Arctic CH4 budget. However, significant knowledge gaps exist on the overall magnitude of the net CH4 sink in these cold, dry systems as the spatial and environmental limits for CH4 oxidation has not been determined. In particular, the extent, magnitude and drivers of CH4 oxidation in mountains and alpine landforms, which occupy large land areas in the Arctic and High Arctic has not yet been investigated leaving a potential vast CH4 sink unquantified with major potential implications for our conceptual view of Arctic CH4 budget in a changing climate. Here we present the results from two expeditions in the summers of 2015 and 2016 from Disko Bay and in the pro-glacial landscape in vicinity of the Russell Glacier, Kangerlussuaq, Greenland, respectively. The aim of our work is to determine the magnitude and extent of net uptake of atmospheric CH4 across a variety of previously unexplored dry tundra and post-glacial landforms in the Arctic, i.e. marginal moraines and other glacial features at the Greenland ice sheet as well as mountain tops and outwash plains. We used high-precision, mobile cavity-ring-down spectrometers (e.g. model G4301 GasScouter, Picarro Inc.) to achieve reliable flux estimates in sub-ambient CH4 concentration levels with a 4-minute enclosure time per chamber measurement. Our results show a persistent net uptake of CH4 uptake in these dry, extreme environments that rival the sink strength observed in temperate forest soils, otherwise considered the primary global terrestrial sink of atmospheric CH4. In this dynamic glacial landscape the magnitude of the net CH4 uptake is mainly constrained by recent landscape evolution along glacier margins and meltwater systems. Utilizing the high mobility and precision of a new generation of greenhouse gas analyzers, like the Picarro GasScouter, we can explore beyond our traditional field scale the spatial drivers of CH4 oxidation in the harsh Arctic landscape. Thus, our measurements highlight the importance of net CH4 uptake in tundra soils for the Arctic CH4 budget.

Impact of soil type, moisture, and depth on swede midge (Diptera: Cecidomyiidae) pupation and emergence.

PubMed

Chen, Mao; Shelton, Anthony M

2007-12-01

Contarinia nasturtii (Kieffer) (Diptera: Cecidomyiidae), a common insect pest in Europe and a new invasive pest in North America, causes severe damage to cruciferous crops. Currently, many counties in Canada and the United States in which C. nasturtii has not been previously reported are at risk of being infested by C. nasturtii. Effectiveness of chemical control is limited, especially under high population pressure in fields, because the cryptic habits of C. nasturtii protect them from insecticidal sprays. Alternative management strategies against C. nasturtii that are needed to protect crucifers and soil management for the pupal stage were studied as one option. Six different types of soils (loam fine sand, fine sand, clay loam, muck, Chenango shale loam, and silt loam soil) were collected from commercial cabbage fields in New York and studied in the laboratory for their impact on C. nasturtii pupation and emergence. The results indicated that extremely wet or dry soils significantly hindered C. nasturtii emergence, regardless of soil type, suggesting that soil type alone may not be a major factor regulating C. nasturtii abundance. Optimal moisture content for C. nasturtii emergence varied for different soils. Most C. nasturtii pupated within the top 1 cm of soil. Furthermore, we found that >5 cm of soil cover effectively reduced the emergence number and delayed the time of emergence. Based on these results, we suggest that soil manipulation (moisture content and cultivation practices) should be considered as an important component in an overall integrated pest management program for C. nasturtii.

A toxicity test in artificial soil based on the life-history strategy of the nematode Plectus acuminatus

DOE Office of Scientific and Technical Information (OSTI.GOV)

Kammenga, J.E.; Van Koert, P.H.G.; Riksen, J.A.G.

1996-05-01

The ecological risk assessment of toxicants in soil requires reproducible and relevant test systems using a wide range of species. To supplement present test methods from the Organisation of Economic Cooperation and Development (OECD) in artificial soil with earthworms and springtails, a toxicity test in OECD artificial soil has been developed using the bacterivorous nematode Plectus acuminatus (Bastian, 1865) (Nematoda; Plectidae). The juvenile to adult ratio was used as a test parameter since previous life-cycle studies pointed out that fitness of P. acuminatus was strongly determined by changes in both reproduction and juvenile survival. Optimal conditions for the performance ofmore » nematodes in OECD artificial soil were determined (pH{sub KCl} = 5.5, temperature = 20C, and a moisture content of 70% dry wt. artificial soil), and tests were conducted with cadmium, copper, and pentachlorophenol. After an exposure period of 3 weeks the EC50 for cadmium was 321.0 {+-} 1.7 mg/kg dry wt., and the no-observed-effect concentration (NOEC) was 32 mg/kg dry wt. The EC50 for pentachlorophenol was 47.9 {+-} 1.2 mg/kg dry wt., and the NOEC was <10 mg/kg dry wt. For copper the EC50 was 162 {+-} 0.2 mg/kg dry wt., and the NOEC was 32 mg/kg dry wt. It is concluded that the nematode test may well supplement current coil test systems using earthworms and springtails.« less

Specialization of Bacillus in the Geochemically Challenged Environment of Death Valley

NASA Astrophysics Data System (ADS)

Kopac, S.

2014-04-01

Death Valley is the hottest, driest place in North America, a desert with soils containing toxic elements such as boron and lead. While most organisms are unable to survive under these conditions, a diverse community of bacteria survives here. What has enabled bacteria to adapt and thrive in a plethora of extreme and stressful environments where other organisms are unable to grow? The unique environmental adaptations that distinguish ecologically distinct bacterial groups (ecotypes) remain a mystery, in contrast to many animal species (perhaps most notably Darwin's ecologically distinct finch species). We resolve the ecological factors associated with recently diverged ecotypes of the soil bacteria Bacillus subtilis and Bacillus licheniformis, isolated from the dry, geochemically challenging soils of Death Valley, CA. To investigate speciation associated with challenging environmental parameters, we sampled soil transects along a 400m stretch that parallels a decrease in salinity adjacent to a salt flat; transects also encompass gradients in soil B, Cu, Fe, NO3, and P, all of which were quantified in our soil samples. We demarcated strains using Ecotype Simulation, a sequence-based algorithm. Each ecotype's habitat associations were determined with respect to salinity, B, Cu, Fe, NO3, and P. In addition, our sample strains were tested for tolerance of copper, boron and salinity (all known to inhibit growth at high concentrations) by comparing their growth over a 20 hour period. Ecotypes differed in their habitat associations with salinity, boron, copper, iron, and other ecological factors; these environmental dimensions are likely causing speciation of B. subtilis-licheniformis ecotypes at our sample site. Strains also differed in tolerance of boron and copper, providing evidence that our sequence-based demarcations reflect real differences in metabolism. By better understanding the relationship between bacterial speciation and the environment, we can begin to predict the habitability of unexplored extreme and extra-Earth environments.

Soil water storage, rainfall and runoff relationships in a tropical dry forest catchment

NASA Astrophysics Data System (ADS)

Farrick, Kegan K.; Branfireun, Brian A.

2014-12-01

In forested catchments, the exceedance of rainfall and antecedent water storage thresholds is often required for runoff generation, yet to our knowledge these threshold relationships remain undescribed in tropical dry forest catchments. We, therefore, identified the controls of streamflow activation and the timing and magnitude of runoff in a tropical dry forest catchment near the Pacific coast of central Mexico. During a 52 day transition phase from the dry to wet season, soil water movement was dominated by vertical flow which continued until a threshold soil moisture content of 26% was reached at 100 cm below the surface. This satisfied a 162 mm storage deficit and activated streamflow, likely through lateral subsurface flow pathways. High antecedent soil water conditions were maintained during the wet phase but had a weak influence on stormflow. We identified a threshold value of 289 mm of summed rainfall and antecedent soil water needed to generate >4 mm of stormflow per event. Above this threshold, stormflow response and magnitude was almost entirely governed by rainfall event characteristics and not antecedent soil moisture conditions. Our results show that over the course of the wet season in tropical dry forests the dominant controls on runoff generation changed from antecedent soil water and storage to the depth of rainfall.

Differential response of ammonia-oxidizing archaea and bacteria to the wetting of salty arid soil.

PubMed

Sher, Yonatan; Ronen, Zeev; Nejidat, Ali

2016-08-01

Ammonia-oxidizing archaea and bacteria (AOA, AOB) catalyze the first and rate-limiting step of nitrification. To examine their differential responses to the wetting of dry and salty arid soil, AOA and AOB amoA genes (encoding subunit A of the ammonia monooxygenase) and transcripts were enumerated in dry (summer) and wet (after the first rainfall) soil under the canopy of halophytic shrubs and between the shrubs. AOA and AOB were more abundant under shrub canopies than between shrubs in both the dry and wetted soil. Soil wetting caused a significant decrease in AOB abundance under the canopy and an increase of AOA between the shrubs. The abundance of the archaeal amoA gene transcript was similar for both the wet and dry soil, and the transcript-to-gene ratios were < 1 independent of niche or water content. In contrast, the bacterial amoA transcript-to-gene ratios were between 78 and 514. The lowest ratio was in dry soil under the canopy and the highest in the soil between the shrubs. The results suggest that the AOA are more resilient to stress conditions and maintain a basic activity in arid ecosystems, while the AOB are more responsive to changes in the biotic and abiotic conditions. © 2016 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Soil greenhouse gas flux, soil moisture, and soil temperature variability among three plant communities from 2015 to 2017 in a High-Arctic lake basin, Northwest Greenland

NASA Astrophysics Data System (ADS)

Konkel, J. M.; Welker, J. M.; Schaeffer, S. M.

2017-12-01

Soil greenhouse gas flux rates are known to vary with plant community and soil environment. Increases in temperature and precipitation are likely to affect the distribution of vegetation and soil conditions in High Arctic ecosystems. In coastal tundra landscapes in northwest Greenland, vegetation, soil organic matter, and greenhouse gas fluxes are thought to be controlled primarily by water availability. In this study, we measured greenhouse gas flux rates, soil moisture, and soil temperature over three summer seasons along a soil moisture gradient in a High Arctic lake basin represented by dry tundra, moist tundra, and wet grassland plant communities. Preliminary results for trace gas fluxes showed N2O production from all three plant communities ranged from 0.03±0.03 to 0.48±0.12 g N ha-1d-1. While wet grassland was a CH4 source up to 5.2±1.1 g C ha-1d-1, dry tundra and moist tundra were CH4 sinks up to -10.4±1.7 and -2.2±0.9 g C ha-1d-1, respectively. For all three seasons, the highest and lowest mean soil CO2 flux rates were measured in wet grassland and moist tundra (up to 18.3±1.1 and 8.7±0.6 kg C ha-1 d-1, respectively). A lab incubation study showed that, with frequent wetting events, soil CO2 flux remained relatively high in wet grassland, was consistently higher in dry tundra than in moist tundra, and dry tundra CO2 flux significantly increased with wetting events. We show that while soil CO2 flux in all three vegetation zones was influenced by soil moisture variability, soil temperature clearly influenced the timing of flux rate increases and decreases over the course of each season. Colder air and soil temperatures in 2017 corresponded with decreased mean soil CO2 flux rates in dry tundra and wet grassland, yet CO2 flux rates remained consistent in moist tundra among all three seasons. These results suggest that climate-induced warmer and wetter soil environmental conditions may increase rates of soil CO2 flux from wet grassland and dry tundra. Further, changes in the distribution of plant communities under future climate scenarios may significantly alter the function of High Arctic lake basins as CH4 sinks or sources, which will be dependent upon the ground area of wet grassland relative to that of dry tundra and moist tundra.

Response of respiration and nutrient availability to drying and rewetting in soil from a semi-arid woodland depends on vegetation patch and a recent wildfire

NASA Astrophysics Data System (ADS)

Sun, Q.; Meyer, W. S.; Koerber, G. R.; Marschner, P.

2015-08-01

Semi-arid woodlands, which are characterised by patchy vegetation interspersed with bare, open areas, are frequently exposed to wildfire. During summer, long dry periods are occasionally interrupted by rainfall events. It is well known that rewetting of dry soil induces a flush of respiration. However, the magnitude of the flush may differ between vegetation patches and open areas because of different organic matter content, which could be further modulated by wildfire. Soils were collected from under trees, under shrubs or in open areas in unburnt and burnt sandy mallee woodland, where part of the woodland experienced a wildfire which destroyed or damaged most of the aboveground plant parts 4 months before sampling. In an incubation experiment, the soils were exposed to two moisture treatments: constantly moist (CM) and drying and rewetting (DRW). In CM, soils were incubated at 80 % of maximum water holding capacity (WHC) for 19 days; in DRW, soils were dried for 4 days, kept dry for another 5 days, then rewetted to 80 % WHC and maintained at this water content until day 19. Soil respiration decreased during drying and was very low in the dry period; rewetting induced a respiration flush. Compared to soil under shrubs and in open areas, cumulative respiration per gram of soil in CM and DRW was greater under trees, but lower when expressed per gram of total organic carbon (TOC). Organic matter content, available P, and microbial biomass C, but not available N, were greater under trees than in open areas. Wild fire decreased the flush of respiration per gram of TOC in the open areas and under shrubs, and reduced TOC and microbial biomass C (MBC) concentrations only under trees, but had little effect on available N and P concentrations. We conclude that the impact of wildfire and DRW events on nutrient cycling differs among vegetation patches of a native semi-arid woodland which is related to organic matter amount and availability.

Soil biochemical properties and microbial resilience in agroforestry systems: effects on wheat growth under controlled drought and flooding conditions.

PubMed

Rivest, David; Lorente, Miren; Olivier, Alain; Messier, Christian

2013-10-01

Agroforestry is increasingly viewed as an effective means of maintaining or even increasing crop and tree productivity under climate change while promoting other ecosystem functions and services. This study focused on soil biochemical properties and resilience following disturbance within agroforestry and conventional agricultural systems and aimed to determine whether soil differences in terms of these biochemical properties and resilience would subsequently affect crop productivity under extreme soil water conditions. Two research sites that had been established on agricultural land were selected for this study. The first site included an 18-year-old windbreak, while the second site consisted in an 8-year-old tree-based intercropping system. In each site, soil samples were used for the determination of soil nutrient availability, microbial dynamics and microbial resilience to different wetting-drying perturbations and for a greenhouse pot experiment with wheat. Drying and flooding were selected as water stress treatments and compared to a control. These treatments were initiated at the beginning of the wheat anthesis period and maintained over 10 days. Trees contributed to increase soil nutrient pools, as evidenced by the higher extractable-P (both sites), and the higher total N and mineralizable N (tree-based intercropping site) found in the agroforestry compared to the conventional agricultural system. Metabolic quotient (qCO2) was lower in the agroforestry than in the conventional agricultural system, suggesting higher microbial substrate use efficiency in agroforestry systems. Microbial resilience was higher in the agroforestry soils compared to soils from the conventional agricultural system (windbreak site only). At the windbreak site, wheat growing in soils from agroforestry system exhibited higher aboveground biomass and number of grains per spike than in conventional agricultural system soils in the three water stress treatments. At the tree-based intercropping site, higher wheat biomass, grain yield and number of grains per spike were observed in agroforestry than in conventional agricultural system soils, but in the drought treatment only. Drought (windbreak site) and flooding (both sites) treatments significantly reduced wheat yield and 1000-grain weight in both types of system. Relationships between soil biochemical properties and soil microbial resilience or wheat productivity were strongly dependent on site. This study suggests that agroforestry systems may have a positive effect on soil biochemical properties and microbial resilience, which could operate positively on crop productivity and tolerance to severe water stress. Copyright © 2013 Elsevier B.V. All rights reserved.

Mineralization of carbon and nitrogen from freeze- and over-dried plant material added to soil

DOE Office of Scientific and Technical Information (OSTI.GOV)

Moorhead, K.K.; Graetz, D.A.; Reddy, K.R.

Drying organic material before soil incorporation is a common procedure used in mineralization or decomposition studies. A laboratory study was conducted to determine the effect of drying methods on plant C and N and associated mineralization patterns in soil. Freeze- and oven-dried water hyacinth (Eichhornia crassipes (Mart) Solms) was added to a Kendrick soil (loamy, siliceous, hyperthermic Arenic Paleudults) at a rate of 5 g kg{sup {minus}1} and incubated in the dark at 27{degree}C for 90 d. Oven drying in paper bags significantly increased the lignin content and decreased the mineral content of the plant material compared to freeze drying.more » The total C and N was not significantly different for the two materials. The mineralization of C from freeze-dried plant material was more rapid during the initial stage of decomposition and remained significantly higher throughout the incubation. At 90 d, 50, and 41% of the plant C had evolved as CO{sub 2} for the freeze- and oven-dried plant material, respectively. Mineralization of {sup 15}N from the plant material accounted for 33% of the applied N of the freeze-dried material and 23% of the applied N of the oven-dried material. Nitrogen mineralization and CO{sub 2} evolution were linearly correlated (r=0.998) for the oven-dried plant material, but less correlated (r=0.770) for the freeze-dried material.« less

Potassium ferrate [Fe(VI)] does not mediate self-sterilization of a surrogate mars soil

PubMed Central

Crawford, Ronald L; Paszczynski, Andrzej; Allenbach, Lisa

2003-01-01

Background Martian soil is thought to be enriched with strong oxidants such as peroxides and/or iron in high oxidation states that might destroy biological materials. There is also a high flux of ultraviolet radiation at the surface of Mars. Thus, Mars may be inhospitable to life as we know it on Earth. We examined the hypothesis that if the soil of Mars contains ferrates [Fe(VI)], the strongest of the proposed oxidizing species, and also is exposed to high fluxes of UV radiation, it will be self-sterilizing. Results Under ambient conditions (25°C, oxygen and water present) K2FeO4 mixed into sand mineralized some reactive organic molecules to CO2, while less reactive compounds were not degraded. Dried endospores of Bacillus subtilis incubated in a Mars surrogate soil comprised of dry silica sand containing 20% by weight K2FeO4 and under conditions similar to those now on Mars (extreme desiccation, cold, and a CO2-dominated atmosphere) were resistant to killing by the ferrate-enriched sand. Similar results were observed with permanganate. Spores in oxidant-enriched sand exposed to high fluxes of UV light were protected from the sporocidal activity of the radiation below about 5 mm depths. Conclusion Based on our data and previously published descriptions of ancient but dormant life forms on Earth, we suggest that if entities resembling bacterial endospores were produced at some point by life forms on Mars, they might still be present and viable, given appropriate germination conditions. Endospores delivered to Mars on spacecraft would possibly survive and potentially compromise life detection experiments. PMID:12694634

Uncovering the effects of Arundo invasion & forest restoration on riparian soils: Plant controls on microbial processes & trace gas flux in a California watershed

NASA Astrophysics Data System (ADS)

Dowdy, K. L.; Dudley, T.; Schimel, J.

2016-12-01

The opportunistic reed Arundo donax has invaded riparian zones in many California watersheds, altering hydrological and ecological processes. There have been intense efforts to restore these watersheds to native vegetation. How the shifts in communities—native to invaded to restored—affect soil conditions and processes, however, remains unclear. Because riparian zones are hotspots of nutrient cycling and greenhouse gas flux, it is critical to understand how plant community composition (and associated litter contributions) governs riparian biogeochemistry. How do organic matter inputs in invaded and restored plant communities alter soil microbial processes and trace gas dynamics? In this study, we use laboratory incubations to compare microbial cycling of C and nitrogen (N) and trace gas flux between the soils and litter of the invasive Arundo and three native riparian species: Populus tricocarpa, Salix laevigata, and Baccharis salicifolia (or, black cotton wood, red willow, and mulefat). Soils beneath Arundo and Salix produced CO2 at a similar rate ( 250 ug CO2 g dry soil-1 hour-1), while Populus and Baccharis produced less ( 170 ug CO2 g dry soil-1 hour-1). All soils consumed CH4; however, Arundo soils consumed more than native-restored species, which consumed similar quantities (-0.013 CH4 g dry soil-1 hour-1 in Arundo vs. -0.009 CH4 g dry soil-1 hour-1 in native). Arundo soils also produced less N2O (0.02 ug N2O g dry soil-1 hour-1) than all native species ( 0.09 ug N2O g dry soil-1 hour-1). Arundo contributed far less litter inputs than native-restored species, as Arundo leaves senesce and remain on the stalk; furthermore, Arundo litter has been shown to have a higher C:N (40.2) than Salix and Baccharis (30.9). Greater CH4 consumption and lower N2O production in Arundo soils may be the result of enhanced porosity compared to restored soils, leading to more aeration and less methanogenesis and denitrification, or it may be that there is lower N availability in Arundo soils suppressing nitrification and reducing NH4- inhibition of methanotrophs.

Differences on nitrogen availability in a soil amended with fresh, composted and thermally-dried sewage sludge.

PubMed

Tarrasón, D; Ojeda, G; Ortiz, O; Alcañiz, J M

2008-01-01

Anaerobically-digested sludge called fresh sludge (F), composted sludge (C) and thermally-drying sludge (T), all from the same batch, were applied to the surface of a calcareous Udic Calciustept with loamy texture. Dosage equivalent was 10 t ha(-1) of dry matter. The concentration of mineral nitrogen (ammonium and nitrate) in the soil was measured in order to estimate the effects of the post-treatments to which the different kinds of sewage sludge are subjected in relation to the availability of N in the surface layer of the soil. The most significant differences in NH(4)-N and NO(3)-N concentrations due to the transformation of the organic matter were observed during the first three weeks following soil amendment. Thermally-dried and composted sludge initially displayed higher concentrations of ammonium and nitrate in soil. Five months after the amendment, soil applied with fresh sludge showed the highest concentrations of NH(4)-N and NO(3)-N (6.1 and 36.6 mg kg(-1), respectively). It is clear that the processes of composting and thermal-drying influence the bioavailability of nitrogen from the different types of sewage sludge.

Climate-change effects on soils: Accelerated weathering, soil carbon and elemental cycling

DOE Office of Scientific and Technical Information (OSTI.GOV)

Qafoku, Nikolla

2015-04-01

Climate change [i.e., high atmospheric carbon dioxide (CO2) concentrations (≥400 ppm); increasing air temperatures (2-4°C or greater); significant and/or abrupt changes in daily, seasonal, and inter-annual temperature; changes in the wet/dry cycles; intensive rainfall and/or heavy storms; extended periods of drought; extreme frost; heat waves and increased fire frequency] is and will significantly affect soil properties and fertility, water resources, food quantity and quality, and environmental quality. Biotic processes that consume atmospheric CO2, and create organic carbon (C) that is either reprocessed to CO2 or stored in soils are the subject of active current investigations, with great concern over themore » influence of climate change. In addition, abiotic C cycling and its influence on the inorganic C pool in soils is a fundamental global process in which acidic atmospheric CO2 participates in the weathering of carbonate and silicate minerals, ultimately delivering bicarbonate and Ca2+ or other cations that precipitate in the form of carbonates in soils or are transported to the rivers, lakes, and oceans. Soil responses to climate change will be complex, and there are many uncertainties and unresolved issues. The objective of the review is to initiate and further stimulate a discussion about some important and challenging aspects of climate-change effects on soils, such as accelerated weathering of soil minerals and resulting C and elemental fluxes in and out of soils, soil/geo-engineering methods used to increase C sequestration in soils, soil organic matter (SOM) protection, transformation and mineralization, and SOM temperature sensitivity. This review reports recent discoveries, identifies key research needs, and highlights opportunities offered by the climate-change effects on soils.« less

Biological Dimensions of Crack Morphology in Dryland Soils

NASA Astrophysics Data System (ADS)

DeCarlo, K. F.; Spiegel, M.; Caylor, K. K.

2014-12-01

Macropores and cracks have an integral role in soil hydrology, and the physicochemical factors that induce them have been the subject of much laboratory research. How these processes translate to field soils, however, is often obfuscated by the biological elements present that complicate its formation and dynamics. In this study, we investigated the biological influence of herbivores and vegetation on 3D crack morphology in a dryland swelling soil (black cotton/vertisol). Fieldwork was conducted at and near the Kenya Long-Term Exclosure Experiment (KLEE) plots in Mpala, central Kenya, where three different soil regions were identified: highly vegetated areas, animal trails, and termite mounds. Crack networks were physically characterized by pouring liquid resin into the soil and excavating them when dry, after which they were imaged and quantified using medical magnetic resonance imaging (MRI). Cracking intensity of each cast was corrected via soil moisture and bulk density measurements at 5 cm intervals over 30 cm. 3D characterization of the soil system shows that mechanical compaction is a major influence in the formation of extensive and deep cracks in animal trails, with megaherbivores (e.g. elephants) inducing the most extreme cracks. Bioturbation is seen as a major influence in the formation of shallower cracks in termite mounds, as termites loosen and aerate the soil and reduce the soil's cohesive properties. Highly vegetated soils show a large degree of variability: small, disconnected soil patches induced by vegetative cover and a larger root network results in smaller and shallower cracks, but full vegetative cover induces deep and irregular cracks, possibly due to diverted rainfall. Our results highlight the intricate connections between the biology and physics that dictate soil processes in a complex soil system at the field scale.

Soil acidification from atmospheric ammonium sulphate in forest canopy throughfall

NASA Astrophysics Data System (ADS)

van Breemen, N.; Burrough, P. A.; Velthorst, E. J.; van Dobben, H. F.; de Wit, Toke; Ridder, T. B.; Reijnders, H. F. R.

1982-10-01

Acid rain commonly has high concentrations of dissolved SO2-4, NH+4 and NO-3. Sulphuric and nitric acids are usually considered to be the acidic components, whereas ammonium has a tendency to increase the pH of rainwater1. Ammonium can be transformed to nitric acid in soil but this source of acidity is generally less important than wet and dry deposition of free acids2,3. Here we describe the occurrence of high concentrations of ammonium in canopy throughfall (rainwater falling through the tree canopy) and stemflow in woodland areas in the Netherlands, resulting in acid inputs to soils two to five times higher than those previously described for acid atmospheric deposition2-5. The ammonium is present as ammonium sulphate, which probably forms by interaction of ammonia (volatilized from manure) with sulphur dioxide (from fossil fuels), on the surfaces of vegetation. After leaching by rainwater the ammonium sulphate reaching the soil oxidizes rapidly to nitric and sulphuric acid, producing extremely low pH values (2.8-3.5) and high concentrations of dissolved aluminium in the non-calcareous soils studied. Deposition of ammonium sulphate on the surfaces of vegetation and its environmental consequences are probably most important in areas with intensive animal husbandry.

Soil moisture variation patterns observed in Hand County, South Dakota

NASA Technical Reports Server (NTRS)

Jones, E. B.; Owe, M.; Schmugge, T. J. (Principal Investigator)

1981-01-01

Soil moisture data were taken during 1976 (April, June, October), 1977 (April, May, June), and 1978 (May, June, July) Hand County, South Dakota as part of the ground truth used in NASA's aircraft experiments to study the use of microwave radiometers for the remote sensing of soil moisture. The spatial variability observed on the ground during each of the sampling events was studied. The data reported are the mean gravimetric soil moisture contained in three surface horizon depths: 0 to 2.5, 0 to 5 and 0 to 10 cm. The overall moisture levels ranged from extremely dry conditions in June 1976 to very wet in May 1978, with a relatively even distribution of values within that range. It is indicated that well drained sites have to be partitioned from imperfectly drained areas when attempting to characterize the general moisture profile throughout an area of varying soil and cover type conditions. It is also found that the variability in moisture content is greatest in the 0 to 2.5 cm measurements and decreases as the measurements are integrated over a greater depth. It is also determined that the sampling intensity of 10 measurements per km is adequate to estimate the mean moisture with an uncertainty of + or - 3 percent under average moisture conditions in areas of moderate to good drainage.

Short and Long-Term Soil Moisture Effects of Liana Removal in a Seasonally Moist Tropical Forest

PubMed Central

Reid, Joseph Pignatello; Schnitzer, Stefan A.; Powers, Jennifer S.

2015-01-01

Lianas (woody vines) are particularly abundant in tropical forests, and their abundance is increasing in the neotropics. Lianas can compete intensely with trees for above- and belowground resources, including water. As tropical forests experience longer and more intense dry seasons, competition for water is likely to intensify. However, we lack an understanding of how liana abundance affects soil moisture and hence competition with trees for water in tropical forests. To address this critical knowledge gap, we conducted a large-scale liana removal experiment in a seasonal tropical moist forest in central Panama. We monitored shallow and deep soil moisture over the course of three years to assess the effects of lianas in eight 0.64 ha removal plots and eight control plots. Liana removal caused short-term effects in surface soils. Surface soils (10 cm depth) in removal plots dried more slowly during dry periods and accumulated water more slowly after rainfall events. These effects disappeared within four months of the removal treatment. In deeper soils (40 cm depth), liana removal resulted in a multi-year trend towards 5–25% higher soil moisture during the dry seasons with the largest significant effects occurring in the dry season of the third year following treatment. Liana removal did not affect surface soil temperature. Multiple and mutually occurring mechanisms may be responsible for the effects of liana removal on soil moisture, including competition with trees, and altered microclimate, and soil structure. These results indicate that lianas influence hydrologic processes, which may affect tree community dynamics and forest carbon cycling. PMID:26545205

Physical and ecological controllers of the microbial responses to drying and rewetting in soil

NASA Astrophysics Data System (ADS)

Leizeaga, Ainara; Meisner, Annelein; Bååth, Erland; Rousk, Johannes

2017-04-01

Soil moisture is one of the most powerful factors that regulate microbial activity in soil. The variation of moisture leads to drying-rewetting (DRW) events which are known to induce enormous dynamics in soil biogeochemistry; however, the microbial underpinnings are mostly unknown. Rewetting a dry soil can result in two response patterns of bacterial growth. In the Type 1 response, bacteria start growing immediately after rewetting with rates that increase in a linear fashion to converge with those prior to the DRW within hours. This growth response coincides with respiration rates that peak immediately after rewetting to then exponentially decrease. In the Type 2 response, bacterial growth remains very low after rewetting during a lag period of up to 20 hours. Bacteria then increase their growth rates exponentially to much higher rates than those before the DRW event. This growth response coincides with respiration rates that increase to high rates immediately after rewetting that then remain elevated and sometimes even increase further in sync with the growth increase. Previous studies have shown that (i) extended drying (ii) starving before DRW and (iii) inhibitors combined with drought could change the bacterial response from Type 1 to Type 2. This suggested that the response of bacteria upon rewetting could be related to the harshness of the disturbance as experienced by the microbes. In the present study, we set out to study if reduced harshness could change a Type 2 response into a Type 1 response. We hypothesized that (1) a reduced physical harshness of drying and (2) induced tolerance to drying in microbial communities could change a Type 2 response into a Type 1 growth response upon rewetting. To address this, two experiments were performed. First, soils were partially dried to different water contents and bacterial response upon rewetting was measured. Second, soils were exposed to repeated DRW cycles (< 9 cycles) and the bacterial response was followed after rewetting. A less harsh drying (partial drying) of a soil could change the growth responses to rewetting. The lag period decreased with less complete drying to eventually became 0, transitioning from a Type 2 to a Type 1. Even after a Type 1 response was induced, further reduction of harshness could also lead to a faster recovery of growth rates. Our results support the hypothesis: the physical harshness of drying can determine the microbial survival and thus the type of bacterial growth response. Subjecting soil to DRW cycles could also induce a change from a Type 2 to Type 1 growth response. This suggested that there was a community shift towards higher drought-tolerance. Thus, identical physical disturbance was less harsh for a community that has been subjected to more drying rewetting cycles. To predict how the microbial community's control of the soil C budget of ecosystems is affected warming-induced drought, our results demonstrate that both the physical characteristics of the disturbance and the community's tolerance to drought need to be considered.

Heavy metal speciation and risk assessment in dry land and paddy soils near mining areas at Southern China.

PubMed

Liu, Guannan; Wang, Juan; Zhang, Erxi; Hou, Jing; Liu, Xinhui

2016-05-01

Heavy metal contamination of soils has been a long-standing environmental problem in many parts of the world, and poses enormous threats to ecosystem and human health. Speciation of heavy metals in soils is crucial to assessing environmental risks from contaminated soils. In this study, total concentrations and speciation of As, Cd, Cr, Cu, Mn, Ni, Pb, and Zn were measured for agricultural soils near mines along the Diaojiang River in Guangxi Zhuang Autonomy Region, China. The sources of heavy metals in soils also were identified to assess their effect on speciation distribution of soil heavy metals. Furthermore, the speciation distribution of Cd and Zn, main soil heavy metal pollutants, in dry land and paddy soils were compared. Results showed that there were two severely polluted regions near mine area reaching alarming pollution level. As, Cd, Pb, and Zn were more affected by mining activities, showing very strong pollution level in soils. The mean percentage of exchangeable and carbonate fraction was highest and up to 46.8 % for Cd, indicating a high environmental risk. Greater bioavailable fractions of As, Cd, Cu, Mn, Pb, and Zn were found in soils heavily polluted by mining activities, whereas Cr and Ni as geogenic elements in the stable residual fraction. In addition, in the dry land soils, reducible fraction proportion of Cd was higher than that in the paddy soils, whereas exchangeable and carbonate fraction of Cd was lower than that in the paddy soils. Oxidizable fraction of Zn was higher in the paddy soils than that in the dry land soils. The results indicate that the sources of soil heavy metals and land types affect heavy metal speciation in the soil and are significant for environmental risk assessment of soil heavy metal pollutions.

Development of Charge to Mass Ratio Microdetector for Future Mars Mission

NASA Technical Reports Server (NTRS)

Chen, Yuan-Lian Albert

2003-01-01

The Mars environment comprises a dry, cold and low air pressure atmosphere with low gravity (0.38g) and high resistivity soil. The global dust storms that cover a large portion of Mars are observed often from Earth. This environment provides an ideal condition for turboelectric charging. The extremely dry conditions on the Martian surface have raised concerns that electrostatic charge buildup will not be dissipated easily. If turboelectrically generated charge cannot be dissipated or avoided, then dust will accumulate on charged surfaces and electrostatic discharge may cause hazards for future exploration missions. The low surface on Mars helps to prolong the charge decay on the dust particles and soil. To better understanding the physics of Martian charged dust particles is essential to future Mars missions. We research and design two sensors, velocity/charge sensor and PZT momentum sensors, to measure the velocity distribution, charge distribution and mass distribution of Martian wed dust particles. These sensors are fabricated at NASA Kenney Space Center, Electrostatic and Surface Physics Laboratory. The sensors are calibrated. The momentum sensor is capable to measure 45 pan size particles. The designed detector is very simple, robust, without moving parts, and does not require a high voltage power supply. Two sensors are combined to form the Dust Microdetector - CHAL.

Effect of biochar addition on short-term N2O and CO2 emissions during repeated drying and wetting of an anthropogenic alluvial soil.

PubMed

Yang, Fang; Lee, Xinqing; Theng, Benny K G; Wang, Bing; Cheng, Jianzhong; Wang, Qian

2017-06-01

Agricultural soils are an important source of greenhouse gases (GHG). Biochar application to such soils has the potential of mitigating global anthropogenic GHG emissions. Under irrigation, the topsoils in arid regions experience repeated drying and wetting during the crop growing season. Biochar incorporation into these soils would change the soil microbial environment and hence affect GHG emissions. Little information, however, is available regarding the effect of biochar addition on carbon dioxide (CO 2 ) and nitrous oxide (N 2 O) emissions from agricultural soils undergoing repeated drying and wetting. Here, we report the results of a 49-day aerobic incubation experiment, incorporating biochar into an anthropogenic alluvial soil in an arid region of Xinjiang Province, China, and measuring CO 2 and N 2 O emissions. Under both drying-wetting and constantly moist conditions, biochar amendment significantly increased cumulative CO 2 emission. At the same time, there was a significant reduction (up to ~20 %) in cumulative N 2 O emission, indicating that the addition of biochar to irrigated agricultural soils may effectively slow down global warming in arid regions of China.

Transformation of soil organics under extreme climate events: a project description

NASA Astrophysics Data System (ADS)

Blagodatskaya, Evgenia

2017-04-01

Recent climate scenarios predict not only continued global warming but also an increased frequency and intensity of extreme climatic events such as strong changes in temperature and precipitation with unusual regional dynamics. Weather anomalies at European territory of Russia are currently revealed as long-term drought and strong showers in summer and as an increased frequency of soil freezing-thawing cycles. Climate extremes totally change biogeochemical processes and elements cycling both at the ecosystem level and at the level of soil profile mainly affecting soil biota. Misbalance in these processes can cause a reduction of soil carbon stock and an increase of greenhouse gases emission. Our project aims to reveal the transformation mechanisms of soil organic matter caused by extreme weather events taking into consideration the role of biotic-abiotic interactions in regulation of formation, maintenance and turnover of soil carbon stock. Our research strategy is based on the novel concept considering extreme climatic events (showers after long-term droughts, soil flooding, freezing-thawing) as abiotic factors initiating a microbial succession. Study on stoichiometric flexibility of plants under climate extremes as well as on resulting response of soil heterotrophs on stoichiometric changes in substrate will be used for experimental prove and further development of the theory of ecological stoichiometry. The results enable us to reveal the mechanisms of biotic - abiotic interactions responsible for the balance between mobilization and stabilization of soil organic matter. Identified mechanisms will form the basis of an ecosystem model enabled to predict the effects of extreme climatic events on biogenic carbon cycle in the biosphere.

The Influence of Processing Soil With a Coffee Grinder on Soil Classification

DTIC Science & Technology

2015-01-20

shaker, sieves , coffee grinder, plastic limit tool, bowls, spatulas, and scoops. To classify soils, a dry sieve analysis is performed, as is a Plastic...processed with the coffee grinder for 90 seconds as described above. Sieve analysis using the wet preparation method was used to test and classify the soils...one 90 second cycle of Elevator Soil Figure 3: The blades after three 90 second cycles of Elevator Soil 71Page 4.2 Ottawa Sand Dry Sieve Analysis

Soybean supplementation increases the resilience of microbial and nematode communities in soil to extreme rainfall in an agroforestry system.

PubMed

Sun, Feng; Pan, Kaiwen; Li, Zilong; Wang, Sizhong; Tariq, Akash; Olatunji, Olusanya Abiodun; Sun, Xiaoming; Zhang, Lin; Shi, Weiyu; Wu, Xiaogang

2018-06-01

A current challenge for ecological research in agriculture is to identify ways in which to improve the resilience of the soil food web to extreme climate events, such as severe rainfall. Plant species composition influence soil biota communities differently, which might affect the recovery of soil food web after extreme rainfall. We compared the effects of rainfall stress up on the soil microbial food web in three planting systems: a monoculture of the focal species Zanthoxylum bungeanum and mixed cultures of Z. bungeanum and Medicago sativa or Z. bungeanum and Glycine max. We tested the effect of the presence of a legume on the recovery of trophic interactions between microorganisms and nematodes after extreme rainfall. Our results indicated that all chemical properties of the soil recovered to control levels (normal rainfall) in the three planting systems 45 days after exposure to extreme rain. However, on day 45, the bulk microbial community differed from controls in the monoculture treatment, but not in the two mixed planting treatments. The nematode community did not fully recover in the monoculture or Z. bungeanum and M. sativa treatments, while nematode populations in the combined Z. bungeanum and G. max treatment were indistinguishable from controls. G. max performed better than M. sativa in terms of increasing the resilience of microbial and nematode communities to extreme rainfall. Soil microbial biomass and nematode density were positively correlated with the available carbon and nitrogen content in soil, demonstrating a link between soil health and biological properties. This study demonstrated that certain leguminous plants can stabilize the soil food web via interactions with soil biota communities after extreme rainfall. Copyright © 2018 Elsevier B.V. All rights reserved.

Distribution and Diversity of Soil Microfauna from East Antarctica: Assessing the Link between Biotic and Abiotic Factors

PubMed Central

Velasco-Castrillón, Alejandro; Schultz, Mark B.; Colombo, Federica; Gibson, John A. E.; Davies, Kerrie A.; Austin, Andrew D.; Stevens, Mark I.

2014-01-01

Terrestrial life in Antarctica has been described as some of the simplest on the planet, and mainly confined to soil microfaunal communities. Studies have suggested that the lack of diversity is due to extreme environmental conditions and thought to be driven by abiotic factors. In this study we investigated soil microfauna composition, abundance, and distribution in East Antarctica, and assessed correlations with soil geochemistry and environmental variables. We examined 109 soil samples from a wide range of ice-free habitats, spanning 2000 km from Framnes Mountains to Bailey Peninsula. Microfauna across all samples were patchily distributed, from complete absence of invertebrates to over 1600 specimens/gram of dry weight of soil (gdw), with highest microfauna abundance observed in samples with visible vegetation. Bdelloid rotifers were on average the most widespread found in 87% of sampled sites and the most abundant (44 specimens/gdw). Tardigrades occurred in 57% of the sampled sites with an abundance of 12 specimens/gdw. Nematodes occurred in 71% of samples with a total abundance of 3 specimens/gdw. Ciliates and mites were rarely found in soil samples, with an average abundance of 1.3 and 0.04 specimens/gdw, respectively. We found that microfaunal composition and abundance were mostly correlated with the soil geochemical parameters; phosphorus, NO3 − and salinity, and likely to be the result of soil properties and historic landscape formation and alteration, rather than the geographic region they were sampled from. Studies focusing on Antarctic biodiversity must take into account soil geochemical and environmental factors that influence population and species heterogeneity. PMID:24498126

Extreme weather-year sequences have nonadditive effects on environmental nitrogen losses.

PubMed

Iqbal, Javed; Necpalova, Magdalena; Archontoulis, Sotirios V; Anex, Robert P; Bourguignon, Marie; Herzmann, Daryl; Mitchell, David C; Sawyer, John E; Zhu, Qing; Castellano, Michael J

2018-01-01

The frequency and intensity of extreme weather years, characterized by abnormal precipitation and temperature, are increasing. In isolation, these years have disproportionately large effects on environmental N losses. However, the sequence of extreme weather years (e.g., wet-dry vs. dry-wet) may affect cumulative N losses. We calibrated and validated the DAYCENT ecosystem process model with a comprehensive set of biogeophysical measurements from a corn-soybean rotation managed at three N fertilizer inputs with and without a winter cover crop in Iowa, USA. Our objectives were to determine: (i) how 2-year sequences of extreme weather affect 2-year cumulative N losses across the crop rotation, and (ii) if N fertilizer management and the inclusion of a winter cover crop between corn and soybean mitigate the effect of extreme weather on N losses. Using historical weather (1951-2013), we created nine 2-year scenarios with all possible combinations of the driest ("dry"), wettest ("wet"), and average ("normal") weather years. We analyzed the effects of these scenarios following several consecutive years of relatively normal weather. Compared with the normal-normal 2-year weather scenario, 2-year extreme weather scenarios affected 2-year cumulative NO 3 - leaching (range: -93 to +290%) more than N 2 O emissions (range: -49 to +18%). The 2-year weather scenarios had nonadditive effects on N losses: compared with the normal-normal scenario, the dry-wet sequence decreased 2-year cumulative N 2 O emissions while the wet-dry sequence increased 2-year cumulative N 2 O emissions. Although dry weather decreased NO 3 - leaching and N 2 O emissions in isolation, 2-year cumulative N losses from the wet-dry scenario were greater than the dry-wet scenario. Cover crops reduced the effects of extreme weather on NO 3 - leaching but had a lesser effect on N 2 O emissions. As the frequency of extreme weather is expected to increase, these data suggest that the sequence of interannual weather patterns can be used to develop short-term mitigation strategies that manipulate N fertilizer and crop rotation to maximize crop N uptake while reducing environmental N losses. © 2017 John Wiley & Sons Ltd.

Overview of different aspects of climate change effects on soils

DOE Office of Scientific and Technical Information (OSTI.GOV)

Qafoku, Nikolla P.

2014-08-01

Climate change [i.e., high atmospheric carbon dioxide (CO 2) concentrations (≥400 ppm); increasing air temperatures (2-4°C or greater); significant and/or abrupt changes in daily, seasonal, and inter-annual temperature; changes in the wet/dry cycles; intensive rainfall and/or heavy storms; extended periods of drought; extreme frost; heat waves and increased fire frequency] is and will significantly affect soil properties and fertility, water resources, food quantity and quality, and environmental quality. Biotic processes that consume atmospheric CO 2 and create organic carbon (C) that is either reprocessed to CO 2 or stored in soils, are the subject of active current investigations with greatmore » concern over the influence of climate change. In addition, abiotic C cycling and its influence on the inorganic C pool in soils is a fundamental global process in which acidic atmospheric CO 2 participates in the weathering of carbonate and silicate minerals, ultimately delivering bicarbonate and Ca 2+ or other cations that precipitate in the form of carbonates in soils or are transported to the rivers, lakes, and oceans. Soil responses to climate change will be complex, and there are many uncertainties and unresolved issues. The objective of the review is to initiate and further stimulate a discussion about some important and challenging aspects of climate-change effects on soils, such as accelerated weathering of soil minerals and resulting C and elemental fluxes in and out of soils, soil/geo-engineering methods used to increase C sequestration in soils, soil organic matter (SOM) protection, transformation and mineralization, and SOM temperature sensitivity. This review reports recent discoveries and identifies key research needs required to understand the effects of climate change on soils.« less

Land surface energy budget during dry spells: global CMIP5 AMIP simulations vs. satellite observations

NASA Astrophysics Data System (ADS)

Gallego-Elvira, Belen; Taylor, Christopher M.; Harris, Phil P.; Ghent, Darren; Folwell, Sonja S.

2015-04-01

During extended periods without rain (dry spells), the soil can dry out due to vegetation transpiration and soil evaporation. At some point in this drying cycle, land surface conditions change from energy-limited to water-limited evapotranspiration, and this is accompanied by an increase of the ground and overlying air temperatures. Regionally, the characteristics of this transition determine the influence of soil moisture on air temperature and rainfall. Global Climate Models (GCMs) disagree on where and how strongly the surface energy budget is limited by soil moisture. Flux tower observations are improving our understanding of these dry down processes, but typical heterogeneous landscapes are too sparsely sampled to ascertain a representative regional response. Alternatively, satellite observations of land surface temperature (LST) provide indirect information about the surface energy partition at 1km resolution globally. In our study, we analyse how well the dry spell dynamics of LST are represented by GCMs across the globe. We use a spatially and temporally aggregated diagnostic to describe the composite response of LST during surface dry down in rain-free periods in distinct climatic regions. The diagnostic is derived from daytime MODIS-Terra LST observations and bias-corrected meteorological re-analyses, and compared against the outputs of historical climate simulations of seven models running the CMIP5 AMIP experiment. Dry spell events are stratified by antecedent precipitation, land cover type and geographic regions to assess the sensitivity of surface warming rates to soil moisture levels at the onset of a dry spell for different surface and climatic zones. In a number of drought-prone hot spot regions, we find important differences in simulated dry spell behaviour, both between models, and compared to observations. These model biases are likely to compromise seasonal forecasts and future climate projections.

Local root abscisic acid (ABA) accumulation depends on the spatial distribution of soil moisture in potato: implications for ABA signalling under heterogeneous soil drying

PubMed Central

Puértolas, Jaime; Conesa, María R.; Ballester, Carlos; Dodd, Ian C.

2015-01-01

Patterns of root abscisic acid (ABA) accumulation ([ABA]root), root water potential (Ψroot), and root water uptake (RWU), and their impact on xylem sap ABA concentration ([X-ABA]) were measured under vertical partial root-zone drying (VPRD, upper compartment dry, lower compartment wet) and horizontal partial root-zone drying (HPRD, two lateral compartments: one dry, the other wet) of potato (Solanum tuberosum L.). When water was withheld from the dry compartment for 0–10 d, RWU and Ψroot were similarly lower in the dry compartment when soil volumetric water content dropped below 0.22cm3 cm–3 for both spatial distributions of soil moisture. However, [ABA]root increased in response to decreasing Ψroot in the dry compartment only for HPRD, resulting in much higher ABA accumulation than in VPRD. The position of the sampled roots (~4cm closer to the surface in the dry compartment of VPRD than in HPRD) might account for this difference, since older (upper) roots may accumulate less ABA in response to decreased Ψroot than younger (deeper) roots. This would explain differences in root ABA accumulation patterns under vertical and horizontal soil moisture gradients reported in the literature. In our experiment, these differences in root ABA accumulation did not influence [X-ABA], since the RWU fraction (and thus ABA export to shoots) from the dry compartment dramatically decreased simultaneously with any increase in [ABA]root. Thus, HPRD might better trigger a long-distance ABA signal than VPRD under conditions allowing simultaneous high [ABA]root and relatively high RWU fraction. PMID:25547916

Local root abscisic acid (ABA) accumulation depends on the spatial distribution of soil moisture in potato: implications for ABA signalling under heterogeneous soil drying.

PubMed

Puértolas, Jaime; Conesa, María R; Ballester, Carlos; Dodd, Ian C

2015-04-01

Patterns of root abscisic acid (ABA) accumulation ([ABA]root), root water potential (Ψroot), and root water uptake (RWU), and their impact on xylem sap ABA concentration ([X-ABA]) were measured under vertical partial root-zone drying (VPRD, upper compartment dry, lower compartment wet) and horizontal partial root-zone drying (HPRD, two lateral compartments: one dry, the other wet) of potato (Solanum tuberosum L.). When water was withheld from the dry compartment for 0-10 d, RWU and Ψroot were similarly lower in the dry compartment when soil volumetric water content dropped below 0.22cm(3) cm(-3) for both spatial distributions of soil moisture. However, [ABA]root increased in response to decreasing Ψroot in the dry compartment only for HPRD, resulting in much higher ABA accumulation than in VPRD. The position of the sampled roots (~4cm closer to the surface in the dry compartment of VPRD than in HPRD) might account for this difference, since older (upper) roots may accumulate less ABA in response to decreased Ψroot than younger (deeper) roots. This would explain differences in root ABA accumulation patterns under vertical and horizontal soil moisture gradients reported in the literature. In our experiment, these differences in root ABA accumulation did not influence [X-ABA], since the RWU fraction (and thus ABA export to shoots) from the dry compartment dramatically decreased simultaneously with any increase in [ABA]root. Thus, HPRD might better trigger a long-distance ABA signal than VPRD under conditions allowing simultaneous high [ABA]root and relatively high RWU fraction. © The Author 2014. Published by Oxford University Press on behalf of the Society for Experimental Biology.

Survival of rhizobia in two soils as influenced by storage conditions.

PubMed

Martyniuk, Stefan; Oroń, Jadwiga

2008-01-01

Two soils were kept moist at 4 degrees C, -20 degrees C or air-dried at 20-22 degrees C and after one week, one month, two months and six months of storage at these conditions changes in soil populations of Rhizobium leguminosarum bv. trifolii (Rlt) and Rhizobium leguminosarum bv. viciae (Rlv) were examined. In one air-dried soil (from Grab6w) markedly lower numbers of both Rlt and Rlv., as compared to the refrigerated or frozen samples, were found already after 1 week of storage. In the case of the second soil (from Osiny) air-drying significantly reduced numbers of the rhizobia after 2 and 6 months of storage. The soil from Osiny contained higher amounts of C org, total N and clay than the Grabów soil. Both soils stored moist in a refrigerator (4 degrees C) or frozen (-20 degrees C) retained similar populations of the examined rhizobia throughout the entire storage period, indicating that soil freezing is not detrimental for the examined rhizobia.

Future Simulated Intensification of Precipitation Extremes, CMIP5 Model Uncertainties and Dependencies

NASA Astrophysics Data System (ADS)

Bador, M.; Donat, M.; Geoffroy, O.; Alexander, L. V.

2017-12-01

Precipitation intensity during extreme events is expected to increase with climate change. Throughout the 21st century, CMIP5 climate models project a general increase in annual extreme precipitation in most regions. We investigate how robust this future increase is across different models, regions and seasons. We find that there is strong similarity in extreme precipitation changes between models that share atmospheric physics, reducing the ensemble of 27 models to 14 independent projections. We find that future simulated extreme precipitation increases in most models in the majority of land grid cells located in the dry, intermediate and wet regions according to each model's precipitation climatology. These increases significantly exceed the range of natural variability estimated from long equilibrium control runs. The intensification of extreme precipitation across the entire spectrum of dry to wet regions is particularly robust in the extra-tropics in both wet and dry season, whereas uncertainties are larger in the tropics. The CMIP5 ensemble therefore indicates robust future intensification of annual extreme rainfall in particular in extra-tropical regions. Generally, the CMIP5 robustness is higher during the dry season compared to the wet season and the annual scale, but inter-model uncertainties in the tropics remain important.

DRY–WET CYCLES INCREASE PESTICIDE RESIDUE RELEASE FROM SOIL

PubMed Central

Jablonowski, Nicolai David; Linden, Andreas; Köppchen, Stephan; Thiele, Björn; Hofmann, Diana; Burauel, Peter

2012-01-01

Soil drying and rewetting may alter the release and availability of aged pesticide residues in soils. A laboratory experiment was conducted to evaluate the influence of soil drying and wetting on the release of pesticide residues. Soil containing environmentally long-term aged (9–17 years) 14C-labeled residues of the herbicides ethidimuron (ETD) and methabenzthiazuron (MBT) and the fungicide anilazine (ANI) showed a significantly higher release of 14C activity in water extracts of previously dried soil compared to constantly moistened soil throughout all samples (ETD: p < 0.1, MBT and ANI: p < 0.01). The extracted 14C activity accounted for 44% (ETD), 15% (MBT), and 20% (ANI) of total residual 14C activity in the samples after 20 successive dry–wet cycles, in contrast to 15% (ETD), 5% (MBT), and 6% (ANI) in extracts of constantly moistened soils. In the dry–wet soils, the dissolved organic carbon (DOC) content correlated with the measured 14C activity in the aqueous liquids and indicated a potential association of DOC with the pesticide molecules. Liquid chromatography MS/MS analyses of the water extracts of dry–wet soils revealed ETD and MBT in detectable amounts, accounting for 1.83 and 0.01%, respectively, of total applied water-extractable parent compound per soil layer. These findings demonstrate a potential remobilization of environmentally aged pesticide residue fractions from soils due to abiotic stresses such as wet–dry cycles. Environ. Toxicol. Chem. 2012; 31: 1941–1947. © 2012 SETAC PMID:22782855

Projected strengthening of Amazonian dry season by constrained climate model simulations

NASA Astrophysics Data System (ADS)

Boisier, Juan P.; Ciais, Philippe; Ducharne, Agnès; Guimberteau, Matthieu

2015-07-01

The vulnerability of Amazonian rainforest, and the ecological services it provides, depends on an adequate supply of dry-season water, either as precipitation or stored soil moisture. How the rain-bearing South American monsoon will evolve across the twenty-first century is thus a question of major interest. Extensive savanization, with its loss of forest carbon stock and uptake capacity, is an extreme although very uncertain scenario. We show that the contrasting rainfall projections simulated for Amazonia by 36 global climate models (GCMs) can be reproduced with empirical precipitation models, calibrated with historical GCM data as functions of the large-scale circulation. A set of these simple models was therefore calibrated with observations and used to constrain the GCM simulations. In agreement with the current hydrologic trends, the resulting projection towards the end of the twenty-first century is for a strengthening of the monsoon seasonal cycle, and a dry-season lengthening in southern Amazonia. With this approach, the increase in the area subjected to lengthy--savannah-prone--dry seasons is substantially larger than the GCM-simulated one. Our results confirm the dominant picture shown by the state-of-the-art GCMs, but suggest that the `model democracy' view of these impacts can be significantly underestimated.

Roles of Arbuscular Mycorrhizal Fungi and Soil Abiotic Conditions in the Establishment of a Dry Grassland Community.

PubMed

Knappová, Jana; Pánková, Hana; Münzbergová, Zuzana

2016-01-01

The importance of soil biota in the composition of mature plant communities is commonly acknowledged. In contrast, the role of soil biota in the early establishment of new plant communities and their relative importance for soil abiotic conditions are still poorly understood. The aim of this study was to understand the effects of soil origin and soil fungal communities on the composition of a newly established dry grassland plant community. We used soil from two different origins (dry grassland and abandoned field) with different pH and nutrient and mineral content. Grassland microcosms were established by sowing seeds of 54 species of dry grassland plants into the studied soils. To suppress soil fungi, half of the pots were regularly treated with fungicide. In this way, we studied the independent and combined effects of soil origin and soil community on the establishment of dry grassland communities. The effect of suppressing the soil fungal community on the richness and composition of the plant communities was much stronger than the effect of soil origin. Contrary to our expectations, the effects of these two factors were largely additive, indicating the same degree of importance of soil fungal communities in the establishment of species-rich plant communities in the soils from both origins. The negative effect of suppressing soil fungi on species richness, however, occurred later in the soil from the abandoned field than in the soil from the grassland. This result likely occurred because the negative effects of the suppression of fungi in the field soil were caused mainly by changes in plant community composition and increased competition. In contrast, in the grassland soil, the absence of soil fungi was limiting for plants already at the early stages of their establishment, i.e., in the phases of germination and early recruitment. While fungicide affects not only arbuscular mycorrhizal fungi but also other biota, our data indicate that changes in the AMF communities are the most likely drivers of the observed changes. The effects of other soil biota, however, cannot be fully excluded. These results suggest that the availability of soil fungi may not be the most important limiting factor for the establishment of grassland species in abandoned fields if we manage to reduce the intensity of competition at these sites e.g., by mowing or grazing.

Response of Carbon Fluxes to Soil Moisture Variability across an Alaskan Tundra Landscape

NASA Astrophysics Data System (ADS)

Melton, S.; Natali, S.; Schade, J. D.; Holmes, R. M.; Mann, P. J.; Fiske, G. J.

2017-12-01

Soils in arctic and sub-arctic permafrost regions store large amounts of carbon (C), which is becoming more biologically available as soils warm and permafrost thaws. Microbial decay of organic forms of C can result in the production and emission of carbon dioxide (CO2) and methane (CH4), and the amount and form of C released into the atmosphere depend on organic matter composition and soil conditions. Soil moisture, which is a strong driver of microbial processes, varies spatially and temporally across tundra landscapes and may change dramatically as a result of permafrost thaw. The Yukon-Kuskokwim Delta (YKD) of Alaska is underlain by discontinuous permafrost and is particularly vulnerable to permafrost thaw and soil moisture changes associated with thaw. As permafrost thaws, some areas may dry as drainage increases with increasing thaw depth. Alternatively, permafrost thaw may lead to ground subsidence and saturation of previously dry soils. Our objective was to investigate patterns in C storage and processing across the landscape and in response to changes in soil moisture in the YKD. We analyzed soil C pools (0-30 cm) and CO2 and CH4 concentrations in soils from sites of different land cover and landscape position, including moist and dry peat plateaus, high and low intensity burned plateaus, fens, and drained lakes. We also conducted aerobic and anaerobic soil incubations to determine changes in CO2 and CH4 production under a range of soil moisture conditions. Soils from burned plateaus, which were drier and had lower C content than unburned soils, had higher CO2 production (per g soil) than unburned soils during aerobic incubations. Both increased and decreased moisture reduced CO2 production from soils. Soil drying increased net CH4 uptake in all aerobically-incubated burned soils, and wetting resulted in CH4 emissions from low intensity burn soils. CO2 and CH4 production from fen soils were higher than from the other landscape positions analyzed here. Our results suggest that soil drying could lead to decreased microbial respiration, whereas subsidence may result in increased methanogenesis. Additionally, amplified CH4 release from burned soils after rainfall events or subsidence may accompany the increased fire frequency projected in tundra regions.

Estimating the impact of seawater on the production of soil water-extractable organic carbon during coastal erosion.

PubMed

Dou, Fugen; Ping, Chien-Lu; Guo, Laodong; Jorgenson, Torre

2008-01-01

The production of water-extractable organic carbon (WEOC) during arctic coastal erosion and permafrost degradation may contribute significantly to C fluxes under warming conditions, but it remains difficult to quantify. A tundra soil collected near Barrow, AK, was selected to evaluate the effects of soil pretreatments (oven drying vs. freeze drying) as well as extraction solutions (pure water vs. seawater) on WEOC yields. Both oven drying and freeze drying significantly increased WEOC release compared with the original moist soil samples; dried samples released, on average, 18% more WEOC than did original moist samples. Similar results were observed for the production of low-molecular-weight dissolved organic C. However, extractable OC released from different soil horizons exhibited differences in specific UV absorption, suggesting differences in WEOC quality. Furthermore, extractable OC yields were significantly less in samples extracted with seawater compared with those extracted with pure water, likely due to the effects of major ions on extractable OC flocculation. Compared with samples from the active horizons, upper permafrost samples released more WEOC, suggesting that continuously frozen samples were more sensitive than samples that had experienced more drying-wetting cycles in nature. Specific UV absorption of seawater-extracted OC was significantly lower than that of OC extracted using pure water, suggesting more aromatic or humic substances were flocculated during seawater extraction. Our results suggest that overestimation of total terrestrial WEOC input to the Arctic Ocean during coastal erosion could occur if estimations were based on WEOC extracted from dried soil samples using pure water.

Using Artificial Soil and Dry-Column Flash Chromatography to Simulate Organic Substance Leaching Process: A Colorful Environmental Chemistry Experiment

ERIC Educational Resources Information Center

de Avellar, Isa G. J.; Cotta, Tais A. P. G.; Neder, Amarilis de V. Finageiv

2012-01-01

Soil is an important and complex environmental compartment and soil contamination contributes to the pollution of aquifers and other water basins. A simple and low-cost experiment is described in which the mobility of three organic compounds in an artificial soil is examined using dry-column flash chromatography. The compounds were applied on top…

Plants as sources of airborne bacteria, including ice nucleation-active bacteria.

PubMed

Lindemann, J; Constantinidou, H A; Barchet, W R; Upper, C D

1982-11-01

Vertical wind shear and concentration gradients of viable, airborne bacteria were used to calculate the upward flux of viable cells above bare soil and canopies of several crops. Concentrations at soil or canopy height varied from 46 colony-forming units per m over young corn and wet soil to 663 colony-forming units per m over dry soil and 6,500 colony-forming units per m over a closed wheat canopy. In simultaneous samples, concentrations of viable bacteria in the air 10 m inside an alfalfa field were fourfold higher than those over a field with dry, bare soil immediately upwind. The upward flux of viable bacteria over alfalfa was three- to fourfold greater than over dry soil. Concentrations of ice nucleation-active bacteria were higher over plants than over soil. Thus, plant canopies may constitute a major source of bacteria, including ice nucleation-active bacteria, in the air.

Persistence of culturable Escherichia coli fecal contaminants in dairy alpine grassland soils.

PubMed

Texier, Stéphanie; Prigent-Combaret, Claire; Gourdon, Marie Hélène; Poirier, Marie Andrée; Faivre, Pierre; Dorioz, Jean Marcel; Poulenard, Jérome; Jocteur-Monrozier, Lucile; Moënne-Loccoz, Yvan; Trevisan, Dominique

2008-01-01

Our knowledge of Escherichia coli (E. coli) ecology in the field is very limited in the case of dairy alpine grassland soils. Here, our objective was to monitor field survival of E. coli in cow pats and underlying soils in four different alpine pasture units, and to determine whether the soil could constitute an environmental reservoir. E. coli was enumerated by MPN using a selective medium. E. coli survived well in cow pats (10(7) to 10(8) cells g(-1) dry pat), but cow pats disappeared within about 2 mo. In each pasture unit, constant levels of E. coli (10(3) to 10(4) cells g(-1) dry soil) were recovered from all topsoil (0-5 cm) samples regardless of the sampling date, that is, under the snow cover, immediately after snow melting, or during the pasture season (during and after the decomposition of pats). In deeper soil layers below the root zone (5-25 cm), E. coli persistence varied according to soil type, with higher numbers recovered in poorly-drained soils (10(3) to 10(4) cells g(-1) dry soil) than in well-drained soils (< 10(2) cells g(-1) dry soil). A preliminary analysis of 38 partial uidA sequences of E. coli from pat and soils highlighted a cluster containing sequences only found in this work. Overall, this study raises the possibility that fecal E. coli could have formed a naturalized (sub)population, which is now part of the indigenous soil community of alpine pasture grasslands, the soil thus representing an environmental reservoir of E. coli.

The influence of land use on the abundance and diversity of ammonia oxidizers.

PubMed

Zhao, Dayong; Luo, Juan; Wang, Jianqun; Huang, Rui; Guo, Kun; Li, Yi; Wu, Qinglong L

2015-02-01

Nitrification plays a significant role in soil nitrogen cycling, a process in which the first step can be catalyzed by ammonia-oxidizing archaea (AOA) and ammonia-oxidizing bacteria (AOB). In this study, six soil samples with distinct land-use regimes (forestland soil, paddy soil, wheat-planted soil, fruit-planted soil, grassland soil, and rape-planted soil) were collected from Chuzhou city in the Anhui province to elucidate the effects of land use on the abundance and diversity of AOA and AOB. The abundance of the archaeal amoA gene ranged from 2.12 × 10(4) copies per gram of dry soil to 2.57 × 10(5) copies per gram of dry soil, while the abundance of the bacterial amoA gene ranged from 5.58 × 10(4) copies per gram of dry soil to 1.59 × 10(8) copies per gram of dry soil. The grassland and the rape-planted soil samples maintained the highest abundance of the bacterial and archaeal amoA genes, respectively. The abundance of the archaeal amoA gene was positively correlated with the pH (P < 0.05). The ammonia concentrations exhibited a significantly positive relation with the abundance of the bacterial amoA gene (P < 0.01) and the number of OTUs of AOB (P < 0.05). The community composition of AOB was more sensitive to the land-use regimes than that of AOA. The data obtained in this study may be useful to better understand the nitrification process in soils with different land-use regimes.

CeO2 nanoparticles induce no changes in phenanthrene toxicity to the soil organisms Porcellionides pruinosus and Folsomia candida.

PubMed

Tourinho, Paula S; Waalewijn-Kool, Pauline L; Zantkuijl, Irene; Jurkschat, Kerstin; Svendsen, Claus; Soares, Amadeu M V M; Loureiro, Susana; van Gestel, Cornelis A M

2015-03-01

Cerium oxide nanoparticles (CeO2 NPs) are used as diesel fuel additives to catalyze oxidation. Phenanthrene is a major component of diesel exhaust particles and one of the most common pollutants in the environment. This study aimed at determining the effect of CeO2 NPs on the toxicity of phenanthrene in Lufa 2.2 standard soil for the isopod Porcellionides pruinosus and the springtail Folsomia candida. Toxicity tests were performed in the presence of CeO2 concentrations of 10, 100 or 1000mg Ce/kg dry soil and compared with results in the absence of CeO2 NPs. CeO2 NPs had no adverse effects on isopod survival and growth or springtail survival and reproduction. For the isopods, LC50s for the effect of phenanthrene ranged from 110 to 143mg/kg dry soil, and EC50s from 17.6 to 31.6mg/kg dry soil. For the springtails, LC50s ranged between 61.5 and 88.3mg/kg dry soil and EC50s from 52.2 to 76.7mg/kg dry soil. From this study it may be concluded that CeO2 NPs have a low toxicity and do not affect toxicity of phenanthrene to isopods and springtails. Copyright © 2014 Elsevier Inc. All rights reserved.

Rhizosphere bacteria containing 1-aminocyclopropane-1-carboxylate deaminase increase yield of plants grown in drying soil via both local and systemic hormone signalling.

PubMed

Belimov, Andrey A; Dodd, Ian C; Hontzeas, Nikos; Theobald, Julian C; Safronova, Vera I; Davies, William J

2009-01-01

Decreased soil water availability can stimulate production of the plant hormone ethylene and inhibit plant growth. Strategies aimed at decreasing stress ethylene evolution might attenuate its negative effects. An environmentally benign (nonchemical) method of modifying crop ethylene relations - soil inoculation with a natural root-associated bacterium Variovorax paradoxus 5C-2 (containing the enzyme 1-aminocyclopropane-1-carboxylate (ACC) deaminase that degrades the ethylene precursor ACC), was assessed with pea (Pisum sativum) plants grown in drying soil. Inoculation with V. paradoxus 5C-2, but not with a transposome mutant with massively decreased ACC deaminase activity, improved growth, yield and water-use efficiency of droughted peas. Systemic effects of V. paradoxus 5C-2 included an amplified soil drying-induced increase of xylem abscisic acid (ABA) concentration, but an attenuated soil drying-induced increase of xylem ACC concentration. A local bacterial effect was increased nodulation by symbiotic nitrogen-fixing bacteria, which prevented a drought-induced decrease in nodulation and seed nitrogen content. Successfully deploying a single bacterial gene in the rhizosphere increased yield and nutritive value of plants grown in drying soil, via both local and systemic hormone signalling. Such bacteria may provide an easily realized, economic means of sustaining crop yields and using irrigation water more efficiently in dryland agriculture.

Moisture and substrate availability constrain soil trace gas fluxes in an eastern Amazonian regrowth forest

NASA Astrophysics Data System (ADS)

Vasconcelos, Steel S.; Zarin, Daniel J.; Capanu, Marinela; Littell, Ramon; Davidson, Eric A.; Ishida, Francoise Y.; Santos, Elisana B.; Araújo, Maristela M.; AragãO, DéBora V.; Rangel-Vasconcelos, LíVia G. T.; de Assis Oliveira, Francisco; McDowell, William H.; de Carvalho, Claudio José R.

2004-06-01

Changes in land-use and climate are likely to alter moisture and substrate availability in tropical forest soils, but quantitative assessment of the role of resource constraints as regulators of soil trace gas fluxes is rather limited. The primary objective of this study was to quantify the effects of moisture and substrate availability on soil trace gas fluxes in an Amazonian regrowth forest. We measured the efflux of carbon dioxide (CO2), nitric oxide (NO), nitrous oxide (N2O), and methane (CH4) from soil in response to two experimental manipulations. In the first, we increased soil moisture availability during the dry season by irrigation; in the second, we decreased substrate availability by continuous removal of aboveground litter. In the absence of irrigation, soil CO2 efflux decreased during the dry season while irrigation maintained soil CO2 efflux levels similar to the wet season. Large variations in soil CO2 efflux consistent with a significant moisture constraint on respiration were observed in response to soil wet-up and dry-down events. Annual soil C efflux for irrigated plots was 27 and 13% higher than for control plots in 2001 and 2002, respectively. Litter removal significantly reduced soil CO2 efflux; annual soil C efflux in 2002 was 28% lower for litter removal plots compared to control plots. The annual soil C efflux:litterfall C ratio for the control treatment (4.0-5.2) was consistent with previously reported values for regrowth forests that indicate a relatively large belowground C allocation. In general, fluxes of N2O and CH4 were higher during the wet season and both fluxes increased during dry-season irrigation. There was no seasonal effect on NO fluxes. Litter removal had no significant impact on N oxide or CH4 emissions. Net soil nitrification did not respond to dry-season irrigation, but was somewhat reduced by litter removal. Overall, these results demonstrate significant soil moisture and substrate constraints on soil trace gas emissions, particularly for CO2, and suggest that climate and land-use changes that alter moisture and substrate availability are therefore likely to have an impact on atmosphere chemistry.

The Ups and Downs of Rhizosphere Resource Exchange

NASA Astrophysics Data System (ADS)

Cardon, Z. G.; Fu, C.; Wang, G.; Stark, J.

2014-12-01

Hydraulic redistribution (HR) of soil water by plants occurs in seasonally dry ecosystems worldwide. During HR, soil water flows from wet soil into roots, through the root system, and out of roots into dry rhizosphere soil. Hydraulic redistribution affects plant physiology and landscape hydrology, and it has long been hypothesized that upward HR of deep water to dry, nutrient-rich surface soil may also stimulate soil nutrient cycling and thus enhance nutrient availability to plants in the field. We report results from a sagebrush-steppe field experiment in northern Utah, USA, showing that stimulation of sagebrush-mediated HL increased rates of nitrogen cycling in the surface soil layer around shrubs at summer's end, and more than quadrupled uptake of nitrogen into developing sagebrush inflorescences. We have built on these empirical data by folding Ryel et al.'s (2002) HR formulation into CLM4.5 and examining how well the combined model can simultaneously simulate measured evapotranspiration, the vertical profile of soil moisture, and the amplitude of HR-associated diel changes in water content, at multiple seasonally-dry Ameriflux sites: Wind River Crane (US-Wrc), Southern California Climate Gradient (US-SCs,g,f,w,d,&c), and Santa Rita Mesquite Savanna (US-SRM). The simulated hydraulic lift during the dry periods has an average value in the range from 0.09 (at US-SCc) to 0.64 (at US-SCf) mm H2O d-1. In many cases, the combined model reproduced seasonal and daily (diel) observations with reasonable accuracy. Among the many model parameters tested, the Clapp and Hornberger parameter "B" in CLM4.5 was critical for a realistic simulation of soil moisture. Modeled HR was also sensitive to the maximum radial soil-root conductance and the soil water potential where that conductance is reduced by 50%. Our next step is to explore how modeled carbon and nutrient cycling in soil layers are affected by redistributed water in the soil column caused by inclusion of HR in CLM4.5.

Subannual spatiotemporal patterns of potential erosion hotspots on full island scale (Mauritius, Indian Ocean): Foci for agrodiversity and ecosystem buffer regions

NASA Astrophysics Data System (ADS)

Rijsdijk, K. F.; Seijmonsbergen, A. C.; Kamminga, T.; Koon, A.; Assenjee, A.; Goolaup, P.

2009-04-01

Economic and agricultural growth on Mauritius has resulted in severe environmental pressure during the last decades. Forest fragmentation (>98%), agricultural intervention, prolonged bare soil periods and changing soil properties in combination with a short rainy cyclone season has led to an increase in surface erosion processes and loss of soil fertility. The sensitivity to soil erosion depends on spatial differences in surface conditions. To reveal hot spots of erosion, the Revised Universal Soil Loss Equation (RUSLE) model was applied for the whole of Mauritius (scale 1:50 000) through ArcGIS algorithms. Although RUSLE is not designed to calculate monthly potential erosion we demonstrate it may indicate realistic spatiotemporal patterns. Subannual soil loss values in 2005 and averaged for a 30 yrs period between 1978-2008, were reclassified into six potential soil erosion categories, from very low to extremely high. In 2005 peaks in potential erosion values in February and March (>1.5t ha-1 month-1) coincide with the cyclone season and very low potential soil loss values from October through December (<0.05t ha-1 month-1) relate to the dry season, which confirms the influence of the R-factor. The calculated values and patterns of potential soil erosion hot spots compare realistically with available soil loss data for various land cover units. Hotspots that would otherwise masked by the annual mean of the annual based RUSLE equation. The outcome provide essential subannual spatiotemporal information to identify areas with increased vulnerability to soil erosion that should prioritized for taking effective measures against future soil loss. In a monocrop setting subannual RUSLE analyses can provide regional and temporal foci to base agrodiversity strategies upon. Further it helps to identify vulnerable spots in buffer zones of threatened ecosystems.

Mitigation of water repellency in burned soils applying hydrophillic polymers

NASA Astrophysics Data System (ADS)

Neris, Jonay; de la Torre, Sara; Vidal-Vazquez, Eva; Lado, Marcos

2017-04-01

In this study, the effect of fire on water repellency was analyzed in soils from different parent materials, as well as the suitability of anionic polyacrylamide (PAM) to reduce water repellency in these soils. Samples were collected in four different sites where wildfires took place: two in the Canary Islands, with soils developed on volcanic materials, and two in Galicia (NW Spain), with soils developed on plutonic rocks. In Galicia, two soil samples were collected in each site, one in the burnt area and one in an adjacent unburnt area. In the Canary Islands, four samples were collected from each site, three inside the burnt area where the soils were affected by different fire intensities, and one in an unburnt adjacent area. Samples were air-dried and sieved by a 2-mm mesh sieve. Water repellency was measured using the Water Drop Penetration Time test. An amount of 10 g of soil was placed in a tray. Five drops of deionized water were place on the soil surface with a pipette, and the time for each drop to fully penetrate into the soil was recorded. PAM solution was applied to the burnt soils simulating a field application rate of 1gm-2. The polymer used was Superfloc A-110 (Kemira Water Solutions BV, Holland) with 1x107 Da molecular weigth and 15% hydrolysis. PAM was sprayed on the soil surface as solution with a concentration 0.2 g/L. After the application, the samples were dried and the WDPT test was performed. Three replicates for each treatment and soil were used, and the treatments included: dry soil, dry soil after a wetting treatment, dry PAM-treated soil. The results showed that water repellency was modified by fire differently in the various soils. In hydrophilic soils and soils with low water repellency, water repellency was increased after the action of fire. In soils with noticeable initial water repellency, this was reduced or eliminated after the fire. Wetting repellent soils caused a decrease in water repellency most probably because of the spatial redistribution of hydrophobic organic compounds that caused water repellency. The addition of PAM further reduced in all of the cases. The application of PAM could be an effective method for mitigation of water repellency in burnt soils.

Wet-dry seasonal and vertical geochemical variations in soil water and their driving forces under different land covers in southwest China karst

NASA Astrophysics Data System (ADS)

Wang, Peng; Hu, Bill X.; Wu, Chuanhao; Xu, Kai

2017-04-01

Karst aquifers supply drinking water for 25% of the world's population, and they are, however, vulnerable to climate change. Bimonthly hydrochemical data in karst soil water samples from July 2010 to July 2011 were obtained to reveal the seasonal and vertical geochemical variations in soil water under five vegetation types in Qingmuguan, a small karst catchment in southwest China. Soil water chemistry was dominated by Ca2+, HCO3-, and SO42- because of the dissolution of limestone, dolomite, and gypsum minerals in the strata. The predominant hydrochemical types in soil water were Ca2+-HCO3-, Ca2+-SO42-, and mixed Ca2+-HCO3-SO42-. Ca2+ and HCO3- concentrations ranked in the following order: shrub land > dry land > afforestation farmland > bamboo land > grassland. In warm and wet seasons, the main ion concentrations in soil water from grasslands were low. Na+, K+, Ca2+, Mg2+, HCO3-, SO42-, and Cl- concentrations in soil water from other lands were high. An opposite trend was observed in cold and dry seasons. Marked seasonal variations were observed in Ca2+, HCO3-, and NO3- in soil water from dry land. The main ion concentrations in soil water from bamboo lands decreased as soil depth increased. By contrast, the chemistry of soil water from other lands increased as soil depth increased. Their ions were accumulated in depth. A consistent high and low variation between the main ions in soil water and the contents of carbonate and CO2 was found in the soil. Hydrochemical changes in soil water were regulated by the effects of dilution and soil CO2.

Influence of hydraulic hysteresis on the mechanical behavior of unsaturated soils and interfaces

NASA Astrophysics Data System (ADS)

Khoury, Charbel N.

Unsaturated soils are commonly widespread around the world, especially at shallow depths from the surface. The mechanical behavior of this near surface soil is influenced by the seasonal variations such as rainfall or drought, which in turn may have a detrimental effect on many structures (e.g. retaining walls, shallow foundations, mechanically stabilized earth walls, soil slopes, and pavements) in contact with it. Thus, in order to better understand this behavior, it is crucial to study the complex relationship between soil moisture content and matric suction (a stress state variable defined as pore air pressure minus pore water pressure) known as the Soil Water Characteristic Curve (SWCC). In addition, the influence of hydraulic hysteresis on the behavior of unsaturated soils, soil-structure interaction (i.e. rough and smooth steel interfaces, soil-geotextile interfaces) and pavement subgrade (depicted herein mainly by resilient modulus, Mr) was also studied. To this end, suction-controlled direct shear tests were performed on soils, rough and smooth steel interfaces and geotextile interface under drying (D) and wetting after drying (DW). The shearing behavior is examined in terms of the two stress state variables, matric suction and net normal stress. Results along the D and DW paths indicated that peak shear strength increased with suction and net normal stress; while in general, the post peak shear strength was not influenced by suction for rough interfaces and no consistent trend was observed for soils and soil-geotextiles interfaces. Contrary to saturated soils, results during shearing at higher suction values (i.e. 25 kPa and above) showed a decrease in water content eventhough the sample exhibited dilation. A behavior postulated to be related to disruption of menisci and/or non-uniformity of pore size which results in an increase in localized pore water pressures. Interestingly, wetting after drying (DW) test results showed higher peak and post peak shear strength than that of the drying (D) tests. This is believed to be the result of many factors such as: (1) cyclic suction stress loading, (2) water content (less on wetting than drying), and (3) type of soil. The cyclic suction loading may have induced irrecoverable plastic strains, resulting in stiffer samples for wetting tests as compared to drying. Additionally, water may be acting as a lubricant and thus resulting in lower shear strength for test samples D with higher water contents than DW samples. Furthermore, various shear strength models were investigated for their applicability to the experimental data. Models were proposed for the prediction of shear strength with suction based on the SWCC. The models are able to predict the shear strength of unsaturated soil and interfaces due to drying and wetting (i.e. hydraulic hysteresis) by relating directly to the SWCC. The proposed models were used and partly validated by predicting different test results from the literature. In addition, an existing elastoplastic constitutive model was investigated and validated by comparing the predicted and experimental (stress-displacement, volume change behavior) results obtained from rough and geotextile interface tests. This study also explores the effect of hydraulic hysteresis on the resilient modulus (Mr) of subgrade soils. Suction-controlled Mr tests were performed on compacted samples along the primary drying, wetting, secondary drying and wetting paths. Two test types were performed to check the effect of cyclic deviatoric stress loading on the results. First, M r tests were performed on the same sample at each suction (i.e. 25, 50, 75, 100 kPa) value along all the paths (drying, wetting etc.). A relationship between resilient modulus (Mr) and matric suction was obtained and identified as the resilient modulus characteristic curve (MRCC). MRCC results indicated that Mr increased with suction along the drying curve. On the other hand, results on the primary wetting indicated higher Mr than that of the primary drying and the secondary drying. The second type of test was performed at selected suction without subjecting the sample to previous Mr tests. Results indicated that Mr compared favorably with the other type of test (i.e. with previous M r testing), which indicates that the cyclic deviatoric stress loading influence was not as significant as the hydraulic hysteresis (i.e. cyclic suction stress loading). A new model to predict the MRCC results during drying and wetting (i.e., hydraulic hysteresis) is proposed based on the SWCC hysteresis. The model predicted favorably the drying and then the wetting results using the SWCC at all stress levels. (Abstract shortened by UMI.)

A Comparison of the Sensitivities of Dominant Plant Species to Experimental Drought

NASA Astrophysics Data System (ADS)

Felton, A. J.; Smith, M.; Griffin-Nolan, R.; Slette, I.

2015-12-01

Locally and globally, climate extremes are expected to become an increasingly important determinant of terrestrial ecosystem structure and functioning. In particular, extreme drought events are likely to have the most pronounced and negative impact on biodiversity (Tilman and El haddi 1992), carbon storage (Ciais et al. 2005) and cycling (Reichstein et al. 2013). As a consequence, an expressed need has been for a next generation of experiments designed to elucidate the causes and consequences of ecosystem sensitivity to drought (Smith 2011, Reichstein et al. 2013). A recent analysis of the 2012 U.S. Southwest drought revealed different sensitivities in primary production across five grassland ecosystems positioned along a precipitation gradient, with the most mesic (wet) grassland less sensitive than the most xeric (dry) grassland (Knapp et al. 2015). While this analysis suggests increasing sensitivity to drought with decreasing mean annual precipitation (MAP), an understanding of the relative roles of the abiotic (e.g., resource availability) and biotic (e.g., species identity) ecosystem components in driving this sensitivity trend is unclear. To address this uncertainty, we conducted a soil moisture manipulation study using the dominant grass species from the tallgrass prairie (892mm MAP), the shortgrass steppe (372mm MAP), and desert grassland (246mm MAP). The study imposed a "dry-down" to four target levels of volumetric soil water content at 25%, 20%, 15% and 10% to simulate different drought intensities. Each plant species experienced identical levels of water availability, with environmental conditions such as soil resource supply and temperature also held constant. Thus, this study allowed us to isolate each species sensitivity to water availability without confounding environmental differences. Measurements included growth rates of stem outputs and photosynthetically active leaves, maximum carbon assimilation, above and belowground net primary production. In total, the proposed application of this study is to contribute towards an understanding of the determinants of grassland ecosystem sensitivity to drought, with the underlying assumption that the responses of dominant plant species will largely determine ecosystem responses to contemporary and future climate change.

Drought Vulnerability Mapping with Geomorphological Approach in Yogyakarta Special Region (DIY) and Central Java

NASA Astrophysics Data System (ADS)

Sudaryatno

2016-11-01

This study aims to determine the level of vulnerability of the geomorphologic drought that occurred in Central Java and Yogyakarta Special Region. This study examines geomorphologic drought. Parameters used were slope, drainage, Available Water Capacity (AWC), permeability, landform, and land use. Landsat 8 and SRTM data were used for the extraction of physical parameters, such as slope, drainage, landform, and land use. The method used in this study is scoring and weighting. Query results were used for data classification by overlaying drought geomorphologic parameters. The expected outcome of this research is to map the geomorphologic drought vulnerability on Central Java and Yogyakarta Special Region. Drought vulnerability was divided into wet, normal and dry classes. Distribution of the dry class is frequent. Some of the dry classes are distributed on the steep till extremely steep slope region and on the structural and karsts landform. This was related to AWC value where region with high AWC contributed to the poor drainage of the soil, such as at Kulonprogo, Purworejo, Kebumen, Blora, Wonogiri, Purbalingga, Pekalongan, Jepara and Kudus regency. Normal classes are distributed on the sloping till steep slope, have moderate till well-drained soil and low AWC, such as at Gunung Kidul, Pati, Temanggung regency, and Magelang city. Wet classes are distributed on the flat or almost flat and sloping region. Most of the wet classes are distributed on volcanic hills and coastal area. Those regions are well-drained and the land uses are mostly for settlement and farming, such as at Sleman, Yogyakarta city, Klaten, Bantul, and Wonosobo regency.

Using 13C labeled glucose to determine soil microbial and physical controls of new C incorporation under drying-rewetting cycles and conservation agricultural management

NASA Astrophysics Data System (ADS)

Li, L.; Schaeffer, S. M.

2017-12-01

Drying-rewetting cycles can induce carbon (C) depletion in soil, while conservation agricultural management aims at soil C sequestration. Understanding the combined effect of drying-rewetting cycles and conservation management is critical for sustaining agricultural soil under climate change. Soil organic C can be stored in a relatively rapidly cycling active pool, or a more slowly cycling passive pool. We conducted a 24-days mesocosm incubation using an agricultural soil from western Tennessee under 35-years of conservation management. Different lengths of drought period before rewetting of 0, 3, 6, and 24 days were applied on the mesocosms. To trace the fate of newly added C, 13C labeled glucose was added to the mesocosms at the beginning of the incubation. After 24 days, dissolvable organic C, microbial biomass C, accumulative microbial respiration, and extracellular enzyme activity were analyzed to evaluate the active C pool; hydrogen peroxide oxidation and aggregate size fractionation were used to examine the passive C pool. The highest cumulative microbial respiration was found in the 6-days treatment combining a N-fixing cover crop with no-tillage, and the lowest in the 24-day treatment with a wheat cover crop combined with conventional-tillage (1000.0±20.5 and 106.8±17.5 µg C-CO2 g-1 dry soil, respectively). The 6-days treatment induced 0.5-4.3 times higher cumulative C-CO2 emission than the 3-days treatment. The proportion of macroaggregates in bulk soil varied between 97.2% and 76.7%, and it was negatively correlated with drying-rewetting frequency. The proportion of microaggregates in bulk soil varied between 21.9% and 2.1%, and it was positively correlated with drying-rewetting frequency. 13C recovery rate in bulk soil varied between 11-53%. The vetch-cover-crop-with-no-tillage treatment facilitated 13C accumulation the most. Our results show that the N fixing cover crops combined with no-tillage treatment induced the highest C accumulation in bulk soil, while the no cover crop combined with conventional tillage induced the lowest C concentration. Our results show that frequent drying-rewetting cycles disrupt macroaggregates and release the microaggregates within macroaggregates, and favor greater C loss combined with greater C storage in less stable aggregate fractions.

Effect of Drying on Heavy Metal Fraction Distribution in Rice Paddy Soil

PubMed Central

Qi, Yanbing; Huang, Biao; Darilek, Jeremy Landon

2014-01-01

An understanding of how redox conditions affect soil heavy metal fractions in rice paddies is important due to its implications for heavy metal mobility and plant uptake. Rice paddy soil samples routinely undergo oxidation prior to heavy metal analysis. Fraction distribution of Cu, Pb, Ni, and Cd from paddy soil with a wide pH range was investigated. Samples were both dried according to standard protocols and also preserved under anaerobic conditions through the sampling and analysis process and heavy metals were then sequentially extracted for the exchangeable and carbonate bound fraction (acid soluble fraction), iron and manganese oxide bound fraction (reducible fraction), organic bound fraction (oxidizable fraction), and residual fraction. Fractions were affected by redox conditions across all pH ranges. Drying decreased reducible fraction of all heavy metals. Curesidual fraction, Pboxidizable fraction, Cdresidual fraction, and Niresidual fraction increased by 25%, 33%, 35%, and >60%, respectively. Pbresidual fraction, Niacid soluble fraction, and Cdoxidizable fraction decreased 33%, 25%, and 15%, respectively. Drying paddy soil prior to heavy metal analysis overestimated Pb and underestimated Cu, Ni, and Cd. In future studies, samples should be stored after injecting N2 gas to maintain the redox potential of soil prior to heavy metal analysis, and investigate the correlation between heavy metal fraction distribution under field conditions and air-dried samples. PMID:24823670

Efficient fog harvesting by Stipagrostis sabulicola (Namib dune bushman grass)

NASA Astrophysics Data System (ADS)

Roth-Nebelsick, A.; Ebner, M.; Miranda, T.

2010-07-01

Stipagrostis sabulicola is an endemic species of the central Namib Desert which settles on extremely arid dune fields. Due to its ability to persistence even during exceptionally dry years it is generally assumed that water supply of this species is substantially based on fog water. In this contribution, the results of a study investigating the capability of S. sabulicola for fog harvesting are presented. For this purpose, stem flow rates of S. sabulicola during fog events, spatial gradient of soil water content (SWC) close to mounds of S. sabulicola and its leaf water potential (LWP) before and after fog events were monitored together with climate parameters. According to the data obtained during this study, S. sabulicola is able to harvest substantial amounts of water by fog catchment from nocturnal fog events. Since culms of S. sabulicola are often stiff with an upright habitus, fog harvesting occurs via stemflow that conducts water directly towards the root zone of a plant. According to this mechanism, the stem runoff is concentrated within the area of the mound. A medium-sized mound of S. sabulicola is able to collect an amount of about 4 l per fog night. This fog harvesting leads to a considerable spatial gradient of soil water content with values decreasing with increasing distance from the mound. As a result of the water input by fog drip, SWC within the mound increases significantly, particularly close to the culm bases where SWC values increased to 2.2 % after a fog event. Due to the uneven distribution of water by stemflow, SWC within a mound shows high spatial heterogeneity which is also illustrated by the numerous outliers and extreme values of SWC within the mound region. This heterogeneity is also due to the fact that several sagging leaves are always present causing fog drip which more or less irregularly scatters moisture. For bare soil outside of a mound, the water content is not substantially increased, amounting to 0.78 % on average during dry days and 0.89 % after fog events. Fog harvesting affects also leaf water potential: whereas leaf water potential declines during dry days, it remains more or less constant on days following fog events. Since mounds of S. sabulicola provide shelter and food for various other organisms such as ants and lizards, their ability for nocturnal fog catchment is of high significance for the ecosystem of the Namib dunes.

Influence of dry soil on the ability of Formosan Subterranean Termites, Coptotermes formosanus, to locate food sources.

USDA-ARS?s Scientific Manuscript database

The effect of barriers of dry soil on the ability of Formosan subterranean termites, Coptotermes formosanus Shiraki, to construct tunnels and find food was evaluated. Termite movement and wood consumption in a three-chambered apparatus were compared for treatments where the soil in the center contai...

Influence of Dry Soil on the Ability of Formosan Subterranean Termites (Coptotermes formosanus) to Locate Food Sources

USDA-ARS?s Scientific Manuscript database

The effect of barriers of dry soil on the ability of Formosan subterranean termites, Coptotermes formosanus Shiraki, to construct tunnels and find food was evaluated. Termite movement and wood consumption in a three-chambered apparatus were compared for treatments where the soil in the center contai...

Timing of seed dispersal generates a bimodal seed bank depth distribution

USGS Publications Warehouse

Espinar, J.L.; Thompson, K.; Garcia, L.V.

2005-01-01

The density of soil seed banks is normally highest at the soil surface and declines monotonically with depth. Sometimes, for a variety of reasons, peak density occurs below the surface but, except in severely disturbed soils, it is generally true that deeper seeds are older. In seasonally dry habitats that develop deep soil cracks during the dry season, it is possible that some seeds fall down cracks and rapidly become deeply buried. We investigated this possibility for three dominant clonal perennials (Scirpus maritimus, S. litoralis, and Juncus subulatus) in the Don??ana salt marsh, a nontidal marsh with a Mediterranean climate located in southwest Spain. Two species, which shed most of their seed during the dry season and have seeds with low buoyancy, had bimodal viable seed depth distributions, with peak densities at the surface and at 16-20 cm. A third species, which shed most seeds after soil cracks had closed and had seeds with high buoyancy, had viable seeds only in surface soil. Bimodal seed bank depth distributions may be relatively common in seasonally dry habitats with fine-textured soils, but their ecological significance has not been investigated.

Individual contributions of climate and vegetation change to soil moisture trends across multiple spatial scales.

PubMed

Feng, Huihui

2016-09-07

Climate and vegetation change are two dominating factors for soil moisture trend. However, their individual contributions remain unknown due to their complex interaction. Here, I separated their contributions through a trajectory-based method across the global, regional and local scales. Our results demonstrated that climate change accounted for 98.78% and 114.64% of the global drying and wetting trend. Vegetation change exhibited a relatively weak influence (contributing 1.22% and -14.64% of the global drying and wetting) because it occurred in a limited area on land. Regionally, the impact of vegetation change cannot be neglected, which contributed -40.21% of the soil moisture change in the wetting zone. Locally, the contributions strongly correlated to the local environmental characteristics. Vegetation negatively affected soil moisture trends in the dry and sparsely vegetated regions and positively in the wet and densely vegetated regions. I conclude that individual contributions of climate and vegetation change vary at the global, regional and local scales. Climate change dominates the soil moisture trends, while vegetation change acts as a regulator to drying or wetting the soil under the changing climate.

Dry deposition and soil-air gas exchange of polychlorinated biphenyls (PCBs) in an industrial area.

PubMed

Bozlaker, Ayse; Odabasi, Mustafa; Muezzinoglu, Aysen

2008-12-01

Ambient air and dry deposition, and soil samples were collected at the Aliaga industrial site in Izmir, Turkey. Atmospheric total (particle+gas) Sigma(41)-PCB concentrations were higher in summer (3370+/-1617 pg m(-3), average+SD) than in winter (1164+/-618 pg m(-3)), probably due to increased volatilization with temperature. Average particulate Sigma(41)-PCBs dry deposition fluxes were 349+/-183 and 469+/-328 ng m(-2) day(-1) in summer and winter, respectively. Overall average particulate deposition velocity was 5.5+/-3.5 cm s(-1). The spatial distribution of Sigma(41)-PCB soil concentrations (n=48) showed that the iron-steel plants, ship dismantling facilities, refinery and petrochemicals complex are the major sources in the area. Calculated air-soil exchange fluxes indicated that the contaminated soil is a secondary source to the atmosphere for lighter PCBs and as a sink for heavier ones. Comparable magnitude of gas exchange and dry particle deposition fluxes indicated that both mechanisms are equally important for PCB movement between air and soil in Aliaga.

Mitigation of Prion Infectivity and Conversion Capacity by a Simulated Natural Process—Repeated Cycles of Drying and Wetting

PubMed Central

Yuan, Qi; Eckland, Thomas; Telling, Glenn; Bartz, Jason; Bartelt-Hunt, Shannon

2015-01-01

Prions enter the environment from infected hosts, bind to a wide range of soil and soil minerals, and remain highly infectious. Environmental sources of prions almost certainly contribute to the transmission of chronic wasting disease in cervids and scrapie in sheep and goats. While much is known about the introduction of prions into the environment and their interaction with soil, relatively little is known about prion degradation and inactivation by natural environmental processes. In this study, we examined the effect of repeated cycles of drying and wetting on prion fitness and determined that 10 cycles of repeated drying and wetting could reduce PrPSc abundance, PMCA amplification efficiency and extend the incubation period of disease. Importantly, prions bound to soil were more susceptible to inactivation by repeated cycles of drying and wetting compared to unbound prions, a result which may be due to conformational changes in soil-bound PrPSc or consolidation of the bonding between PrPSc and soil. This novel finding demonstrates that naturally-occurring environmental process can degrade prions. PMID:25665187

Effect of soil water content on spatial distribution of root exudates and mucilage in the rhizosphere

NASA Astrophysics Data System (ADS)

Holz, Maire; Zarebanadkouki, Mohsen; Kuzyakov, Yakov; Carminati, Andrea

2016-04-01

Water and nutrients are expected to become the major factors limiting food production. Plant roots employ various mechanisms to increase the access to these limited soil resources. Low molecular root exudates released into the rhizosphere increase nutrient availability, while mucilage improves water availability under low moisture conditions. However, studies on the spatial distribution and quantification of exudates in soil are scarce. Our aim was therefore to quantify and visualize root exudates and mucilage distribution around growing roots using neutron radiography and 14C imaging at different levels of water stress. Maize plants were grown in rhizotrons filled with a silty soil and were exposed to varying soil conditions, from optimal to dry. Mucilage distribution around the roots was estimated from the profiles of water content in the rhizosphere - note that mucilage increases the soil water content. The profiles of water content around different root types and root ages were measured with neutron radiography. Rhizosphere extension was approx. 0.7 mm and did not differ between wet and dry treatments. However, water content (i.e. mucilage concentration) in the rhizosphere of plants grown in dry soils was higher than for plants grown under optimal conditions. This effect was particularly pronounced near the tips of lateral roots. The higher water contents near the root are explained as the water retained by mucilage. 14C imaging of root after 14CO2 labeling of shoots (Pausch and Kuzyakov 2011) was used to estimate the distribution of all rhizodeposits. Two days after labelling, 14C distribution was measured using phosphor-imaging. To quantify 14C in the rhizosphere a calibration was carried out by adding given amounts of 14C-glucose to soil. Plants grown in wet soil transported a higher percentage of 14C to the roots (14Croot/14Cshoot), compared to plants grown under dry conditions (46 vs. 36 %). However, the percentage of 14C allocated from roots to rhizosphere (14Crhizosphere/14Croot) was double in plants grown under dry conditions (0.43 vs. 0.75 %). Plants grown in wet soils showed a faster root growth (1.4 cm d-1) compared to plants in dry soil (1 cm d-1). Compared to the results with neutron radiography, rhizosphere extension of 14C was generally higher and strongly depended on root type: it was 2 mm for main roots and 1 mm for lateral roots. This indicates that low molecular exudates diffuse further into the soil than mucilage. As for mucilage, concentration of 14C was higher in the rhizosphere of plants grown under dry conditions. This observation can be explained by: (a) higher allocation of 14C from roots to rhizosphere in dry soils, (b) a fast diffusion of exudates in wet soils, and (c) faster root growth in wet soils, which results in lower exudation per root length. In summary, the combination of neutron radiography and 14C imaging was successfully used to visualize and to quantify the distribution of mucilage and root exudates in the rhizosphere of plants grown in soil. The high concentration of root exudates in rhizosphere under dry conditions might be strategy of plants to increase their water and nutrient availability unfavorable conditions.

Sources of nitric oxide and nitrous oxide following wetting of dry soil

NASA Technical Reports Server (NTRS)

Davidson, Eric A.

1992-01-01

A study is presented which is aimed at distinguishing among autotrophic nitrification, denitrification, and abiological processes as sources of NO and N2O production following wetting of dry soil. To distinguish among these processes, combinations of treatments in laboratory incubations of soil were used which included varying soil water content, autoclaving, C2H2 inhibition, and NO2(-) addition. Biological sources of NO and N2O commenced within minutes of wetting dry soil. Acetylene inhibition revealed that emissions of NO were dependent on nitrification, although a combination of NO2(-) production by nitrifiers and abiological reduction of NO2(-) to NO is also possible. NO emissions exceeded N2O emissions, and nitrification was the dominant source of both gases when soil water was below field capacity. It is concluded that NO emissions appear to be more important when good soil aeration favors nitrification, whereas N2O emissions appear more important when elevated soil water favors denitrification.

Comparison of organochlorine pesticides and polychlorinated biphenyls residues in vegetables, grain and soil from organic and conventional farming in Poland.

PubMed

Witczak, Agata; Abdel-Gawad, Hassan

2012-01-01

Organic and conventional crops were studied by identifying the relationship between persistent organic pollutants in cereals, vegetables and soil. The residues of organochlorine pesticides and polychlorinated biphenyls (PCBs) were determined in grains (rye and wheat), vegetables (carrots and beets) and soil collected from the fields. PCB residues recorded in the beets from organic farming were as high as 3.71 ppb dry weight (dry wt.), while in the soil from conventional farming of beets 0.53 ppb dry wt. Among vegetables, higher concentrations of pesticides were detected in organically grown beets (190.63 ppb dry wt.). Soil samples from the organic farming contained lower levels of organochlorine pesticide residues compared to the conventional farming. Taking into account toxicity equivalent (TEQ), the conventionally grown carrots accumulated the most toxic PCBs. Non-ortho and mono-ortho PCBs were also noted in the grain of conventionally grown rye and amounted to 3.05 pg-TEQ/g wet wt.

Biogeochemical Relationships of a Subtropical Dry Forest on Karst

Treesearch

E. Medina; E. Cuevas; H. Marcano-Vega; E. Meléndez-Ackerman; E.H. Helmer

2017-01-01

Tropical dry forests on calcareous substrate constitute the main vegetation cover in many islands of the Caribbean. Dry climate and nutrient scarcity in those environments are ideal to investigate the potential role of high levels of soil calcium (Ca) in regulating plant selection and productivity. We analyzed the elemental composition of soil, loose litter, and leaf...

Quantifying the influence of deep soil moisture on ecosystem albedo: the role of vegetation Zulia M. Sánchez-Mejía 1 and Shirley A. Papuga1 1School of Natural Resources and the Environment, University of Arizona, Tucson, AZ

NASA Astrophysics Data System (ADS)

Sanchez-Mejia, Z. M.; Papuga, S. A.

2012-12-01

Water limited ecosystems in arid and semiarid regions are characterized by sparse vegetation and a relatively large fraction of bare soil. Importantly, the land surface in these dryland regions is highly sensitive to pulses of moisture that affect the vegetation canopy in density and color, as well as the soil color. Changes in surface conditions due to these pulses have been shown to affect the surface energy fluxes and atmospheric processes in these regions. For instance, previous studies have shown that shallow soil moisture ( < 20 cm below the surface) significantly changes surface albedo (a= SWup/ SWin). Recent studies have highlighted the importance of deep soil moisture ( > 20 cm below the surface) for vegetation dynamics in these regions. We hypothesize that deep soil moisture will change vegetation canopy density and color enough that changes in albedo will be observable at the surface, therefore linking deep soil moisture and albedo. We adopt a conceptual framework to address this hypothesis, where at any point in time the soil profile falls into one of four cases: (1) dry shallow soil and dry deep soil; (2) wet shallow soil and dry deep soil; (3) wet shallow soil and wet deep soil; and (4) dry shallow soil and wet deep soil. At a creosotebush dominated ecosystem of the Santa Rita Experimental Range, southern Arizona during summers of 2011 and 2012, we took albedo measurements during these cases at multiple bare and vegetated patches within the footprint of an eddy covariance tower. We found that when the soil is completely dry (Case 1) albedo is highest in both bare and vegetated patches. Likewise, when the soil is wet in both the shallow and deep regions (Case 3), albedo is lowest in both bare and vegetated patches. Interestingly, we also found that albedo is significantly lower for vegetated patches when the deep soil is wet and shallow soil is dry (Case 4). These results imply that deep soil moisture can be important in altering ecosystem level albedo. We note that ecosystems with higher percent vegetative cover are likely to be more sensitive to deep soil moisture driven changes in albedo. To quantify the influence of percent cover on ecosystem albedo, we populate a 100 x 100 cell grid randomly with bare and vegetated cells. For each case, we assign an albedo value to each cell based on probability distribution functions (PDFs) of soil moisture and albedo created from our field campaign data. Using this technique we can identify for each soil moisture case at which point the percent vegetative cover will significantly influence ecosystem albedo. Quantitative analyses of these ecosystem interactions help identify the unique role of deep soil moisture in land surface - atmosphere interactions.

Fine-Scale Relief in the Amazon Drives Large Scale Ecohydrological Processes

NASA Astrophysics Data System (ADS)

Nobre, A. D.; Cuartas, A.; Hodnett, M.; Saleska, S. R.

2014-12-01

Access to soil water by roots is a key ecophysiological factor for plant productivity in natural systems. Periodically during dry seasons or critically during episodic climate droughts, shortage of water supply can reduce or severely impair plant life. At the other extreme persistent soil waterlogging will limit root respiration and restrict local establishment to adapted species, usually leading to stunted and less productive communities. Soil-water availability is therefore a very important climate variable controlling plant physiology and ecosystem dynamics. Terra-firme, the non-seasonally floodable terrain that covers 82% of the landscape in Amazonia,[1] supports the most massive part of the rainforest ecosystem. The availability of soil water data for terra-firme is scant and very coarse. This lack of data has hampered observational and modeling studies aiming to develop a large-scale integrative ecohydrological picture of Amazonia and its vulnerability to climate change. We have mapped the Amazon basin with a new terrain model developed in our group (HAND, Height Above the Nearest drainage[2]), delineating soil water environments using topographical data from the SRTM digital elevation model (250 m horizontal interpolated resolution). The preliminary results show that more than 50% of Terra-firme has the water table very close to the surface (up to 2 m deep), while the remainder of the upland landscape has variable degree of dependence on non-saturated soil (vadose layer). The mapping also shows extremely heterogeneous patterns of fine-scale relief across the basin, which implies complex ecohydrological regional forcing on the forest physiology. Ecoclimate studies should therefore take into account fine-scale relief and its implications for soil-water availability to plant processes. [1] Melack, J. M., & Hess, L. L. (2011). Remote sensing of the distribution and extent of wetlands in the Amazon basin. In W. J. Junk & M. Piedade (Eds.), Amazonian floodplain forests: Ecophysiology, ecology, biodiversity and sustainable management (pp. 1-28). Ecological Studies-Springer. [2] Nobre, A. D., Cuartas, L. A., Hodnett, M., … Saleska, S. (2011). Height Above the Nearest Drainage - a hydrologically relevant new terrain model. Journal of Hydrology, 404(1-2), 13-29

Changes in Concurrent Risk of Warm and Dry Years under Impact of Climate Change

NASA Astrophysics Data System (ADS)

Sarhadi, A.; Wiper, M.; Touma, D. E.; Ausín, M. C.; Diffenbaugh, N. S.

2017-12-01

Anthropogenic global warming has changed the nature and the risk of extreme climate phenomena. The changing concurrence of multiple climatic extremes (warm and dry years) may result in intensification of undesirable consequences for water resources, human and ecosystem health, and environmental equity. The present study assesses how global warming influences the probability that warm and dry years co-occur in a global scale. In the first step of the study a designed multivariate Mann-Kendall trend analysis is used to detect the areas in which the concurrence of warm and dry years has increased in the historical climate records and also climate models in the global scale. The next step investigates the concurrent risk of the extremes under dynamic nonstationary conditions. A fully generalized multivariate risk framework is designed to evolve through time under dynamic nonstationary conditions. In this methodology, Bayesian, dynamic copulas are developed to model the time-varying dependence structure between the two different climate extremes (warm and dry years). The results reveal an increasing trend in the concurrence risk of warm and dry years, which are in agreement with the multivariate trend analysis from historical and climate models. In addition to providing a novel quantification of the changing probability of compound extreme events, the results of this study can help decision makers develop short- and long-term strategies to prepare for climate stresses now and in the future.

Contrasted response of colloidal, organic and inorganic dissolved phosphorus forms during rewetting of dried riparian soils

NASA Astrophysics Data System (ADS)

Gu, Sen; Gruau, Gérard; Malique, François; Dupas, Rémi; Gascuel-Odoux, Chantal; Petitjean, Patrice; Bouhnik-Le Coz, Martine

2017-04-01

Riparian vegetated buffer strip (RVBS) are currently used to protect surface waters from phosphorus (P) emissions because of their ability to retain P-enriched soil particles. However, this protection role may be counterbalanced by the development in these zones of conditions able to trigger the release of highly mobile dissolved or colloidal P forms. Rewetting after drying is one of these conditions. So far, the potential sources of P mobilized during rewetting after drying are not clearly identified, nor are clearly identified the chemical nature of the released dissolved P species, or the role of the soil P speciation on these forms. In this study, two riparian soils (G and K) showing contrasting soil P speciation (65% of inorganic P species in soil G, as against 70% of organic P) were submitted to three successive dry/wet cycles in the laboratory. Conventional colorimetric determination of P concentrations combined with ultrafiltration, and measurements of iron (Fe) and aluminum (Al) and dissolved organic carbon (DOC) contents using ICP-MS and TOC analyzers, respectively, were used to study the response of the different P forms to rewetting after drying and also their release kinetics during soil leaching. For both soils, marked P release peaks were observed at the beginning of each wet cycles, with the organic-rich K soils giving, however, larger peaks than the inorganic one (G soil). For both soils also, concentrations in molybdate reactive P (MRP) remained quite constant throughout each leaching episode, contrary to the molybdate unreactive P (MUP) concentrations which were high immediately after rewetting and then decreased rapidly during leaching. A speciation change was observed from the beginning to the end of all leaching cycles. Colloidal P was found to be a major fraction of the total P immediately after rewetting (up to 50-70%) and then decreased to the end of each wet cycle where most of the eluted P was true dissolved inorganic P. Colloidal-P exhaustion was tightly associated with DOC, Fe and Al exhaustions. Colloids were larger in size at the beginning than at the end of all cycles. Peak at the beginning of each wet cycles remained quite constant even after two drying/leaching cycles, evidencing the existence of mechanisms able to rebuild a pool of leachable P during drying process. Thus, there was clearly a control of soil characteristics on the released P forms in leachates. Colloidal P carriers appeared to consist of Fe and/or Al oxyhydroxide nano/microparticles associated with organic matter. Most importantly, a survey of colloidal size distribution during leaching indicated that the rapidly exhausted MUP pool consisted of larger size MUP and colloidal P phases, which probably originated from soil macropores, while the relatively infinite MRP pool consisted of smaller size colloidal P and true dissolved MRP phases, which was mobilized from soil micropores. These results further demonstrate the ability of rewetting after drying to lead to pulses of dissolved and colloidal P in riparian soils, thereby evidencing the risks that P-enriched soil particles accumulated in RVBS could constitute a long-term threat for surface water.

Crops nutrition management as measures for climate change adaptation

NASA Astrophysics Data System (ADS)

Hladkikh, Yevheniia

2017-04-01

The main feature of climate change in most countries worldwide is the increasing frequency of extreme weather events such as unpredictable floods, droughts and another abiotic stress for crops. It is not surprising that most countries are interested in technologies for adapting agriculture to climate change, and Ukraine is no exception. But traditional measures which exist in the world practice do not sufficiently take into account the importance of interactions between soil and plants. For example, from 138 projects of the European Climate Adaption Platform only 16 are correlated with the soil, but only one of them investigates the interaction in "soil-plant" system. In this connection, the main aim of our research was to determine the effectiveness of agrochemical techniques in plant nutrition management for crops adaptation to extreme weather fluctuations. The influence of different agrochemical measures in "soil-plant" system on the resilience of crops to different climate conditions of the growing season were investigated in a long-term field experiment that was started in 1969. The experiment was on a Chernozem at the Grakivske Experimental Station in Kharkiv region, Ukraine. Soil samples were taken during the growing season from field under different crops. Soil and plant samples analyses included macro- and micronutrients content, soil moisture. Research in the field experiment has demonstrated a close correlation between the average annual rainfall and content of available forms of macronutrients in the soil (especially for nitrate nitrogen the correlation coefficient was 0.98). Studies have shown that increasing the annual rainfall by 100 mm increases the content of nitrate nitrogen in the soil at 7 mg per kg. Another correlation has shown that the decrease amount of precipitation reduces the range of the N:P and consequently the availability of these elements to crops. Thus, in drought conditions, efficiency of the use of available nutrients by crops depends on the soil moisture and water use efficiency depends on the presence of the necessary nutrients for the crop. In our investigation, the following agrochemical crop nutrition management measures were used. Creating a high phosphate level of the soil contributes to the preservation of soil moisture reserves by 4% higher than in other agricultural background; optimizing the use of water by plants (the use of water per 1 ton of dry matter is reduced by 20-25%); improving the use of nitrogen from the soil to 18-30%. Implementation of integrated fertilizer system as an application macronutrients, micronutrients, biological preparations and humates in the critical phases of plant growth provides a 60% yield increase in extreme weather conditions. The formation of two strips of mineral fertilizers application at different depth contributes to improvement the use of nutrients by plants and to the increase of crop yields by 43% in drought conditions. Optimization of forms and kinds of fertilizer placement in the soil system and feeding time in the critical phases of plant growth, formation of agrochemical background significantly increase the stability of crop yields in different years by the hydrothermal conditions and increase their resistance to stress.

Spatial and temporal variation of moisture content in the soil profiles of two different agricultural fields of semi-arid region.

PubMed

Baskan, Oguz; Kosker, Yakup; Erpul, Gunay

2013-12-01

Modeling spatio-temporal variation of soil moisture with depth in the soil profile plays an important role for semi-arid crop production from an agro-hydrological perspective. This study was performed in Guvenc Catchment. Two soil series that were called Tabyabayir (TaS) and Kervanpinari (KeS) and classified as Leptosol and Vertisol Soil Groups were used in this research. The TeS has a much shallower (0-34 cm) than the KeS (0-134 cm). At every sampling time, a total of geo-referenced 100 soil moisture samples were taken based on horizon depths. The results indicated that soil moisture content changed spatially and temporally with soil texture and profile depth significantly. In addition, land use was to be important factor when soil was shallow. When the soil conditions were towards to dry, higher values for the coefficient of variation (CV) were observed for TaS (58 and 43% for A and C horizons, respectively); however, the profile CV values were rather stable at the KeS. Spatial variability range of TaS was always higher at both dry and wet soil conditions when compared to that of KeS. Excessive drying of soil prevented to describe any spatial model for surface horizon, additionally resulting in a high nugget variance in the subsurface horizon for the TaS. On the contrary to TaS, distribution maps were formed all horizons for the KeS at any measurement times. These maps, depicting both dry and wet soil conditions through the profile depth, are highly expected to reduce the uncertainty associated with spatially and temporally determining the hydraulic responses of the catchment soils.

Effects of arbuscular mycorrhizal fungi and soil nutrient addition on the growth of Phragmites australis under different drying-rewetting cycles.

PubMed

Liang, Jin-Feng; An, Jing; Gao, Jun-Qin; Zhang, Xiao-Ya; Yu, Fei-Hai

2018-01-01

The frequency of soil drying-rewetting cycles is predicted to increase under future global climate change, and arbuscular mycorrhizal fungi (AMF) are symbiotic with most plants. However, it remains unknown how AMF affect plant growth under different frequencies of soil drying-rewetting cycles. We subjected a clonal wetland plant Phragmites australis to three frequencies of drying-rewetting cycles (1, 2, or 4 cycles), two nutrient treatments (with or without), and two AMF treatments (with or without) for 64 days. AMF promoted the growth of P. australis, especially in the 2 cycles of the drying-rewetting treatment. AMF had a significant positive effect on leaf mass and number of ramets in the 2 cycles of the drying-rewetting treatment with nutrient addition. In the 2 cycles of drying-rewetting treatment without nutrient addition, AMF increased leaf area and decreased belowground to aboveground biomass ratio. These results indicate that AMF may assist P. australis in coping with medium frequency of drying-rewetting cycles, and provide theoretical guidance for predicting how wetland plants respond to future global climate change.

Simple Laboratory Experiment for Illustrating Soil Respiration.

ERIC Educational Resources Information Center

Hattey, J. A.; Johnson, G. V.

1997-01-01

Describes an experiment to illustrate the effect of food source and added nutrients (N) on microbial activity in the soil. Supplies include air-dried soil, dried plant material, sources of carbon and nitrogen, a trap such as KOH, colored water, and a 500-mL Erlenmeyer flask. Includes a diagram of an incubation chamber to demonstrate microbial…

Soil Moisture under Different Vegetation cover in response to Precipitation

NASA Astrophysics Data System (ADS)

Liang, Z.; Zhang, J.; Guo, B.; Ma, J.; Wu, Y.

2016-12-01

The response study of soil moisture to different precipitation and landcover is significant in the field of Hydropedology. The influence of precipitation to soil moisture is obvious in addition to individual stable aquifer. With data of Hillsborough County, Florida, USA, the alluvial wetland forest and ungrazed Bahia grass that under wet and dry periods were chosen as the research objects, respectively. HYDRUS-3D numerical simulation method was used to simulate soil moisture dynamics in the root zone (10-50 cm) of those vegetation. The soil moisture response to precipitation was analyzed. The results showed that the simulation results of alluvial wetland forest by HYDRUS-3D were better than that of the Bahia grass, and for the same vegetation, the simulation results of soil moisture under dry period were better. Precipitation was more in June, 2003, the soil moisture change of alluvial wetland forest in 10-30 cm soil layer and Bahia grass in 10 cm soil layer were consistent with the precipitation change conspicuously. The alluvial wetland forest soil moisture declined faster than Bahia grass under dry period, which demonstrated that Bahia grass had strong ability to hold water. Key words: alluvial wetland forest; Bahia grass; soil moisture; HYDRUS-3D; precipitation

Associations between extreme precipitation and acute gastro-intestinal illness due to cryptosporidiosis and giardiasis in an urban Canadian drinking water system (1997-2009).

PubMed

Chhetri, Bimal K; Takaro, Tim K; Balshaw, Robert; Otterstatter, Michael; Mak, Sunny; Lem, Marcus; Zubel, Marc; Lysyshyn, Mark; Clarkson, Len; Edwards, Joanne; Fleury, Manon D; Henderson, Sarah B; Galanis, Eleni

2017-10-01

Drinking water related infections are expected to increase in the future due to climate change. Understanding the current links between these infections and environmental factors is vital to understand and reduce the future burden of illness. We investigated the relationship between weekly reported cryptosporidiosis and giardiasis (n = 7,422), extreme precipitation (>90th percentile), drinking water turbidity, and preceding dry periods in a drinking water system located in greater Vancouver, British Columbia, Canada (1997-2009) using distributed lag non-linear Poisson regression models adjusted for seasonality, secular trend, and the effect of holidays on reporting. We found a significant increase in cryptosporidiosis and giardiasis 4-6 weeks after extreme precipitation. The effect was greater following a dry period. Similarly, extreme precipitation led to significantly increased turbidity only after prolonged dry periods. Our results suggest that the risk of cryptosporidiosis and giardiasis increases with extreme precipitation, and that the effects are more pronounced after a prolonged dry period. Given that extreme precipitation events are expected to increase with climate change, it is important to further understand the risks from these events, develop planning tools, and build resilience to these future risks.

Altered precipitation regime affects the function and composition of soil microbial communities on multiple time scales.

PubMed

Zeglin, L H; Bottomley, P J; Jumpponen, A; Rice, C W; Arango, M; Lindsley, A; McGowan, A; Mfombep, P; Myrold, D D

2013-10-01

Climate change models predict that future precipitation patterns will entail lower-frequency but larger rainfall events, increasing the duration of dry soil conditions. Resulting shifts in microbial C cycling activity could affect soil C storage. Further, microbial response to rainfall events may be constrained by the physiological or nutrient limitation stress of extended drought periods; thus seasonal or multiannual precipitation regimes may influence microbial activity following soil wet-up. We quantified rainfall-driven dynamics of microbial processes that affect soil C loss and retention, and microbial community composition, in soils from a long-term (14-year) field experiment contrasting "Ambient" and "Altered" (extended intervals between rainfalls) precipitation regimes. We collected soil before, the day following, and five days following 2.5-cm rainfall events during both moist and dry periods (June and September 2011; soil water potential = -0.01 and -0.83 MPa, respectively), and measured microbial respiration, microbial biomass, organic matter decomposition potential (extracellular enzyme activities), and microbial community composition (phospholipid fatty acids). The equivalent rainfall events caused equivalent microbial respiration responses in both treatments. In contrast, microbial biomass was higher and increased after rainfall in the Altered treatment soils only, thus microbial C use efficiency (CUE) was higher in Altered than Ambient treatments (0.70 +/- 0.03 > 0.46 +/- 0.10). CUE was also higher in dry (September) soils. C-acquiring enzyme activities (beta-glucosidase, cellobiohydrolase, and phenol oxidase) increased after rainfall in moist (June), but not dry (September) soils. Both microbial biomass C:N ratios and fungal:bacterial ratios were higher at lower soil water contents, suggesting a functional and/or population-level shift in the microbiota at low soil water contents, and microbial community composition also differed following wet-up and between seasons and treatments. Overall, microbial activity may directly (C respiration) and indirectly (enzyme potential) reduce soil organic matter pools less in drier soils, and soil C sequestration potential (CUE) may be higher in soils with a history of extended dry periods between rainfall events. The implications include that soil C loss may be reduced or compensated for via different mechanisms at varying time scales, and that microbial taxa with better stress tolerance or growth efficiency may be associated with these functional shifts.

Spatio-temporal variability of dry and wet periods in mainland Portugal and its relationships with teleconnection patterns

NASA Astrophysics Data System (ADS)

Espírito Santo, Fátima; de Lima, Isabel P.; Silva, Álvaro; Pires, Vanda; de Lima, João L. M. P.

2014-05-01

Large-scale atmospheric circulation patterns and their persistence are known to drive inter-annual variability of precipitation in Europe, although depending on geographical location; this includes precipitation extremes and their trends. The vast range of time and space scales involved leads sometimes to precipitation deficits and surpluses which might affect in a different way the society, the environment and the economy at the local and regional scales, depending on specific conditions. In addition, changes in the climate are expected to affect the occurrence of extreme weather and climate events that might influence significantly the distribution, availability and sustainability of regional water resources. The location of mainland Portugal on the Northeast Atlantic region, in South-western Europe, together with other geographical features, makes this territory vulnerable to extreme dry/wet hydro-meteorological events, driven by the strong variability in precipitation. In our study we discuss, for this territory, the relation between the spatio-temporal variability in those events, including their persistence at different scales, and the variability in several modes of low frequency variability; special attention is dedicated to the North Atlantic Oscillation (NAO) and Scandinavian pattern (SCAND). Some of these dry/wet episodes affect different aspects of the hydrologic cycle and are likely to lead to drought and soil wetness/saturation conditions that can enhance flood events. Such episodes were categorized here using the Standardized Precipitation Index (SPI), which was calculated at short (3 and 6-month) and long (12 and 24-month) time scales from monthly precipitation data recorded in the 1941-2012 period (72 years) at 50 precipitation stations scattered across the study area. Moreover, because SPI is a normalized index, it is also suitable to provide spatial representations of these conditions, allowing the comparison between areas within the same region. Thus, indices were interpolated for the whole territory using deterministic and geostatistical methods, and the zonal statistics results were mapped; the spatial interpolation, analysis and mapping were implemented in ArcGIS. Results confirm that the precipitation in this region is strongly influenced by the NAO and SCAND, in particular in the wettest months. Moreover, the annual SPI shows a significant increase in the extent of dry extremes and a non-significant decrease in the extent of wet extremes. For shorter time scales, the behaviour depends on the season. We discuss the observed SPI trends and the uncertainties for the precipitation regime in the southern and western parts of the Iberian Peninsula, which includes mainland Portugal. Results underline potential applications of SPI for water resources management, which is discussed in the context of the regional hydrological conditions and increasing demand for water for different uses.

No snow for Christmas: the impact of the 2015 extreme winter on CO2 fluxes in European mountain grasslands

NASA Astrophysics Data System (ADS)

Cremonese, Edoardo; Galvagno, Marta; Hammerle, Albin; Filippa, Gianluca; Wohlfahrt, Georg

2016-04-01

The increasing frequency in extreme climate events is very likely to impact the Alps since this region is characterized by very sensitive ecosystems. Typical alpine ecosystems such as mountain grasslands, show a strong seasonality in carbon uptake and release mostly driven by the onset and the end of the snow season. Extreme climate events, such as long warm and/or dry periods, could change typical snow cover temporal pattern, thereby altering the duration of the period of CO2 uptake and release. In recent years many studies have analyzed the impact of delayed or anticipated snowmelt on alpine plant phenology, growth and carbon cycling. However, little is known on the effects of a delayed onset of the snow season. During 2015 the whole planet witnessed several record-breaking warm spells which exceptionally warmed the Alps where the temperature anomaly reached +4°C during both the autumn and winter periods. In particular, the onset of the 2015 winter in the Alps was marked by one of the most prolonged lack of snow in years. In this study, we investigate and discuss the impact of the altered temperature and precipitation pattern during the autumn/winter 2015 on the net ecosystem CO2 exchange of mountain grasslands at high and low altitudes measured by means of the eddy covariance method. In particular we test the following hypotheses: (i) The presence of a snowpack impedes plant photosynthesis, while without a snowpack, plant net CO2 uptake may be possible even during wintertime provided temperatures are warm enough. (ii) Below a snowpack, soil temperatures are around zero degrees Celsius, allowing for microbial activity resulting in intermediate soil respiration; without a snow cover soil temperatures may be either lower or higher than zero degrees Celsius, decreasing or increasing soil respiration. The magnitude and direction of the net ecosystem CO2 exchange of mountain grassland ecosystems is governed by the complex interplay of the factors addressed in hypothesis (i) and (ii).

Soil carbon content and CO2 flux along a hydrologic gradient in a High-Arctic tundra lake basin, Northwest Greenland

NASA Astrophysics Data System (ADS)

McKnight, J.; Klein, E. S.; Welker, J. M.; Schaeffer, S. M.; Franklin, M.

2015-12-01

High Arctic landscapes are composed of watershed basins that vary in size and ecohydrology, but typically have a plant community complex that ranges from dry tundra to moist tundra to wet sedge systems along water body shorelines. The spatial extent of these plant communities reflects mean annual soil moisture and temperature, and is vulnerable to changes in climate conditions. Soil moisture and temperature significantly influence organic matter microbial activity and decomposition, and can affect the fate of soil carbon in tundra soils. Consequently, due to the unique soil carbon differences between tundra plant communities, shifts in their spatial extent may drive future High Arctic biosphere-atmosphere interactions. Understanding this terrestrial-atmosphere trace gas feedback, however, requires quantification of the rates and patterns of CO2 exchange along soil moisture gradients and the associated soil properties. In summer of 2015, soil CO2 flux rate, soil moisture and temperature were measured along a soil moisture gradient spanning three vegetation zones (dry tundra, wet tundra, and wet grassland) in a snow melt-fed lake basin near Thule Greenland. Mean soil temperature during the 2015 growing season was greater in dry tundra than in wet tundra and wet grassland (13.0 ± 1.2, 7.8 ± 0.8, and 5.5 ± 0.9°C, respectively). Mean volumetric soil moisture differed among all three vegetation zones where the soil moisture gradient ranged from 9 % (dry tundra) to 34 % (wet tundra) to 51 % (wet grassland). Mean soil CO2 flux was significantly greater in the wet grassland (1.7 ± 0.1 μmol m-2 s-1) compared to wet tundra (0.9 ± 0.2 μmol m-2 s-1) and dry tundra (1.2 ± 0.2 μmol m-2 s-1). Soil CO2 flux increased and decreased with seasonal warming and cooling of soil temperature. Although soil temperature was an important seasonal driver of soil CO2 flux rates, differences in mean seasonal soil CO2 flux rates among vegetation zones appeared to be a function of the combined effects of soil temperature and soil moisture conditions. These results suggest that the response of vegetation distribution to shifts in precipitation and warmer climate conditions may have significant implications for release of soil carbon as CO2 in High Arctic tundra ecosystems in Northwest Greenland.

Water-use advantage for lianas over trees in tropical seasonal forests.

PubMed

Chen, Ya-Jun; Cao, Kun-Fang; Schnitzer, Stefan A; Fan, Ze-Xin; Zhang, Jiao-Lin; Bongers, Frans

2015-01-01

Lianas exhibit peak abundance in tropical forests with strong seasonal droughts, the eco-physiological mechanisms associated with lianas coping with water deficits are poorly understood. We examined soil water partitioning, sap flow, and canopy eco-physiological properties for 99 individuals of 15 liana and 34 co-occurring tree species in three tropical forests that differed in soil water availability. In the dry season, lianas used a higher proportion of deep soil water in the karst forest (KF; an area with severe seasonal soil water deficit (SSWD)) and in the tropical seasonal forest (TSF, moderate SSWD), permitting them to maintain a comparable leaf water status than trees in the TSF or a better status than trees in the KF. Lianas exhibited strong stomatal control to maximize carbon fixation while minimizing dry season water loss. During the dry period, lianas significantly decreased water consumption in the TSF and the KF. Additionally, lianas had a much higher maximum photosynthetic rates and sap flux density in the wet season and a lower proportional decline in photosynthesis in the dry season compared with those of trees. Our results indicated that access to deep soil water and strong physiological adjustments in the dry season together with active wet-season photosynthesis may explain the high abundance of lianas in seasonally dry forests. © 2014 The Authors. New Phytologist © 2014 New Phytologist Trust.

Trace metal dynamics in floodplain soils of the river Elbe: a review.

PubMed

Schulz-Zunkel, Christiane; Krueger, Frank

2009-01-01

This paper reviews trace metal dynamics in floodplain soils using the Elbe floodplains in Germany as an example of extraordinary importance because of the pollution level of its sediments and soils. Trace metal dynamics are determined by processes of retention and release, which are influenced by a number of soil properties including pH value, redox potential, organic matter, type and amount of clay minerals, iron-, manganese- and aluminum-oxides. Today floodplains act as important sinks for contaminants but under changing hydraulic and geochemical conditions they may also act as sources for pollutants. In floodplains such changes may be extremes in flooding or dry periods that particularly lead to altered redox potentials and that in turn influence the pH value, the mineralization of organic matter as well as the charge of the pedogenic oxides. Such reactions may affect the bioavailability of trace metals in soils and it can be clearly seen that the bioavailability of metals is an important factor for estimating trace metal remobilization in floodplain soils. However as bioavailability is not a constant factor, there is still a lack of quantification of metal mobilization particularly on the basis of changing geochemical conditions. Moreover, mobile amounts of metals in the soil solution do not indicate to which extent remobilized metals will be transported to water bodies or plants and therefore potentially have toxicological effects. Consequently, floodplain areas still need to be taken into consideration when studying the role and behavior of sediments and soils for transporting pollutants within river systems, particularly concerning the Water Framework Directive.

Using thermodynamics to assess biotic and abiotic impediments to root water uptake

NASA Astrophysics Data System (ADS)

Bechmann, Marcel; Hildebrandt, Anke; Kleidon, Axel

2016-04-01

Root water uptake has been the subject of extensive research, dealing with understanding the processes limiting transpiration and understanding strategies of plants to avoid water stress. Many of those studies use models of water flow from the soil through the plant into the atmosphere to learn about biotic and abiotic factors affecting plant water relations. One important question in this context is to identify those processes that are most limiting to water transport, and specifically whether these processes lie within the plant or the soil? Here, we propose to use a thermodynamic formulation of root water uptake to answer this question. The method allows us to separate the energy exported at the root collar into a sum of energy fluxes related to all processes along the flow path, notably including the effect of increasing water retention in drier soils. Evaluation of the several contributions allows us to identify and rank the processes by how much these impede water flow from the soil to the atmosphere. The application of this approach to a complex 3-dimensional root water uptake model reveals insights on the role of root versus soil resistances to limit water flow. We investigate the efficiency of root water uptake in an ensemble of root systems with varying root hydraulic properties. While root morphology is kept the same, root radial and axial resistances are artificially varied. Starting with entirely young systems (uptake roots, high radial, low axial conductance) we increasingly add older roots (transport roots, high axial, low radial conductance) to improve transport within root systems. This yields a range of root hydraulic architectures, where the extremes are limited either by radial uptake capacity or low capacity to transport water along the root system. We model root water uptake in this range of root systems with a 3-dimensional root water uptake model in two different soils, applying constant flux boundary conditions in a dry down experiment and evaluate energy fluxes afterwards. The results show that a minimum of energy is exported in mixed root systems, but a wide range of root systems act near the optimum. A great loss of efficiency only occurs in the extreme cases (only young or only old roots). In all systems near the optimum root water uptake is impeded equally by abiotic and biotic factors in moist conditions, whereas abiotic factors become the limiting factor in dry conditions. The abiotic factors depend on the soil type and are either due to the water retention function or water flow towards individual roots. Small changes in the distribution of root resistance shift the impediments from radial to axial flow path within the root, but without much affecting overall energy export. This suggests that abiotic factors are a dominant control for efficient root water uptake, while morphology only has a comparatively smaller effect, as long as the root system contains a minimum mixture of uptake and transport roots.

Detection of Soil Nitrogen Using Near Infrared Sensors Based on Soil Pretreatment and Algorithms

PubMed Central

Nie, Pengcheng; Dong, Tao; He, Yong; Qu, Fangfang

2017-01-01

Soil nitrogen content is one of the important growth nutrient parameters of crops. It is a prerequisite for scientific fertilization to accurately grasp soil nutrient information in precision agriculture. The information about nutrients such as nitrogen in the soil can be obtained quickly by using a near-infrared sensor. The data can be analyzed in the detection process, which is nondestructive and non-polluting. In order to investigate the effect of soil pretreatment on nitrogen content by near infrared sensor, 16 nitrogen concentrations were mixed with soil and the soil samples were divided into three groups with different pretreatment. The first group of soil samples with strict pretreatment were dried, ground, sieved and pressed. The second group of soil samples were dried and ground. The third group of soil samples were simply dried. Three linear different modeling methods are used to analyze the spectrum, including partial least squares (PLS), uninformative variable elimination (UVE), competitive adaptive reweighted algorithm (CARS). The model of nonlinear partial least squares which supports vector machine (LS-SVM) is also used to analyze the soil reflectance spectrum. The results show that the soil samples with strict pretreatment have the best accuracy in predicting nitrogen content by near-infrared sensor, and the pretreatment method is suitable for practical application. PMID:28492480

Quantitative assessment of pedodiversity and soil erosion within a karst sinkhole in the dry steppe subzone

NASA Astrophysics Data System (ADS)

Smirnova, M. A.; Gennadiev, A. N.

2017-08-01

A detailed study of the soil cover of a sinkhole (300 m2) in the dry steppe landscape of the Bogdinsk-Baskunchak Natural Reserve in Astrakhan oblast has been performed, and the factors of its differentiation have been analyzed. The indices of pedodiversity have been calculated and compared for karst sinkholes in the dry steppe and northern taiga landscapes. Quantitative parameters of the lateral migration of solid soil substances on the slopes of the sinkhole have been determined. The rate of soil erosion decreases from the slope of southern aspect to the slopes of western, northern, and eastern aspects. On the average, it is estimated at 0.4 mm/yr. The average rate of accumulation of solid substances on the lower parts of the slopes and in the bottom of the sinkhole reaches 0.74 mm/yr. A comparative analysis of the soil properties attests to their dependence on the particular position of a given soil within the sinkhole. Downward the slopes of the sinkhole, full-profile brown arid soils (Cambic Calcisols) are replaced by sierozem-like soils (Haplic Calcisols), light-humus poorly developed soils (Luvisols), lithozems (Leptosols), and stratified soils (stratozems, or Colluvic Regosols). The soils within the upper ring-shape soil microzone are more diverse and contrasting with respect to their morphological, physical, chemical, and physicochemical properties. The degree of soil contrasts decreases down the slopes of the sinkhole towards its bottom. The studied sinkhole is characterized by considerable pedodiversity. Quantitative parameters of pedodiversity for the sinkhole in the dry steppe zone are higher than those form the sinkholes in the northern taiga zone.

Increases in soil water content after the mortality of non-native trees in oceanic island forest ecosystems are due to reduced water loss during dry periods.

PubMed

Hata, Kenji; Kawakami, Kazuto; Kachi, Naoki

2016-03-01

The control of dominant, non-native trees can alter the water balance of soils in forest ecosystems via hydrological processes, which results in changes in soil water environments. To test this idea, we evaluated the effects of the mortality of an invasive tree, Casuarina equisetifolia Forst., on the water content of surface soils on the Ogasawara Islands, subtropical islands in the northwestern Pacific Ocean, using a manipulative herbicide experiment. Temporal changes in volumetric water content of surface soils at 6 cm depth at sites where all trees of C. equisetifolia were killed by herbicide were compared with those of adjacent control sites before and after their mortality with consideration of the amount of precipitation. In addition, the rate of decrease in the soil water content during dry periods and the rate of increase in the soil water content during rainfall periods were compared between herbicide and control sites. Soil water content at sites treated with herbicide was significantly higher after treatment than soil water content at control sites during the same period. Differences between initial and minimum values of soil water content at the herbicide sites during the drying events were significantly lower than the corresponding differences in the control quadrats. During rainfall periods, both initial and maximum values of soil water contents in the herbicided quadrats were higher, and differences between the maximum and initial values did not differ between the herbicided and control quadrats. Our results indicated that the mortality of non-native trees from forest ecosystems increased water content of surface soils, due primarily to a slower rate of decrease in soil water content during dry periods. Copyright © 2015 Elsevier B.V. All rights reserved.

Host specificity of two pollinating seed-consuming fly species is not related to soil moisture of host plant in the high Himalayas.

PubMed

Song, Bo; Stöcklin, Jürg; Gao, Yong-Qian; Peng, De-Li; Sun, Hang

2017-01-01

Studying the drivers of host specificity can contribute to our understanding of the origin and evolution of obligate pollination mutualisms. The preference-performance hypothesis predicts that host plant choice of female insects is related mainly to the performance of their offspring. Soil moisture is thought to be particularly important for the survival of larvae and pupae that inhabit soil. In the high Himalayas, Rheum nobile and R. alexandrae differ in their distribution in terms of soil moisture; that is, R. nobile typically occurs in scree with well-drained soils, R. alexandrae in wetlands. The two plant species are pollinated by their respective mutualistic seed-consuming flies, Bradysia sp1. and Bradysia sp2. We investigated whether soil moisture is important for regulating host specificity by comparing pupation and adult emergence of the two fly species using field and laboratory experiments. Laboratory experiments revealed soil moisture did have significant effects on larval and pupal performances in both fly species, but the two fly species had similar optimal soil moisture requirements for pupation and adult emergence. Moreover, a field reciprocal transfer experiment showed that there was no significant difference in adult emergence for both fly species between their native and non-native habitats. Nevertheless, Bradysia sp1., associated with R. nobile , was more tolerant to drought stress, while Bradysia sp2., associated with R. alexandrae , was more tolerant to flooding stress. These results indicate that soil moisture is unlikely to play a determining role in regulating host specificity of the two fly species. However, their pupation and adult emergence in response to extremely wet or dry soils are habitat-specific.

Soil moisture response to experimentally altered snowmelt timing is mediated by soil, vegetation, and regional climate patterns

USGS Publications Warehouse

Conner, Lafe G; Gill, Richard A.; Belnap, Jayne

2016-01-01

Soil moisture in seasonally snow-covered environments fluctuates seasonally between wet and dry states. Climate warming is advancing the onset of spring snowmelt and may lengthen the summer-dry state and ultimately cause drier soil conditions. The magnitude of either response may vary across elevation and vegetation types. We situated our study at the lower boundary of persistent snow cover and the upper boundary of subalpine forest with paired treatment blocks in aspen forest and open meadow. In treatments plots, we advanced snowmelt timing by an average of 14 days by adding dust to the snow surface during spring melt. We specifically wanted to know whether early snowmelt would increase the duration of the summer-dry period and cause soils to be drier in the early-snowmelt treatments compared with control plots. We found no difference in the onset of the summer-dry state and no significant differences in soil moisture between treatments. To better understand the reasons soil moisture did not respond to early snowmelt as expected, we examined the mediating influences of soil organic matter, texture, temperature, and the presence or absence of forest. In our study, late-spring precipitation may have moderated the effects of early snowmelt on soil moisture. We conclude that landscape characteristics, including soil, vegetation, and regional weather patterns, may supersede the effects of snowmelt timing in determining growing season soil moisture, and efforts to anticipate the impacts of climate change on seasonally snow-covered ecosystems should take into account these mediating factors. 

Growth, Survival, and Death of Bacteria and Fungi Following Wet-up of Seasonally Dried Soil Revealed by Heavy Water Stable Isotope Probing

NASA Astrophysics Data System (ADS)

Blazewicz, S.; Nuccio, E. E.; Lim, H.; Schwartz, E.; Brodie, E.; Firestone, M.

2013-12-01

The rapid increase in microbial activity that occurs when a dry soil is rewetted has been well documented and is of great interest due to implications of changing precipitation patterns on soil C dynamics. Several studies have shown minor net changes in microbial population diversity or abundance following wet-up, but the gross population dynamics of bacteria and fungi resulting from soil wet-up are virtually unknown due to the technical difficulties associated with such measurements. Here we applied DNA stable isotope probing with H218O coupled with quantitative PCR and high throughput sequencing of bacterial 16S rRNA genes to characterize taxonomic composition of bacteria and to describe new growth, survival, and mortality of bacteria and fungi following the rewetting of a seasonally dried California annual grassland soil. Total microbial abundance revealed little change throughout the 7-day post-wet incubation, but there was substantial turnover of both bacterial and fungal populations (49 and 52% respectively). New growth was linear between 24 and 168 hours for both bacteria and fungi with average growth rates of 2.3 x 108 bacterial 16S rRNA gene copies gdw-1 h-1 and 4.3 x 107 fungal ITS copies gdw-1 h-1. While bacteria and fungi differed in their mortality and survival characteristics during the 7-day incubation, mortality that occurred within the first 3 hours was similar with 25 and 27% of bacterial and fungal gene copies disappearing from the pre-wet community, respectively. The rapid disappearance of gene copies indicates that cell death, occurring either during the extreme dry down period (preceding 5 months) or during the rapid change in water-potential due to wet-up, generates a significant pool of available C that likely contributes to the large pulse in CO2 associated with wet-up. Sequential bacterial growth patterns observed at the phylum and order levels suggest that an ecologically coherent response was observable at coarse taxonomic levels with growth isolated to a limited number of orders within the first 24 hours, whereas the majority of growing organisms were detected between 24-72 hours post wet-up. Temporal changes in community composition suggest a degree of resilience in response to this abrupt environmental change; composition of new growth first diverges from the original community composition but eventually a trajectory towards the original composition was observed. A dynamic assemblage of growing and dying organisms controlled the CO2 pulse, but the balance between death and growth resulted in relatively stable total population abundances even after a profound and sudden change in environment.

Stable Isotope Analysis of Water Indicates that Mixing Occurs between Mobile and Tightly-Bound Soil Water

NASA Astrophysics Data System (ADS)

Vargas, A. I.; Schaffer, B.; Yuhong, L.; Sternberg, L. O.

2016-12-01

Stable oxygen (δ18O) and hydrogen (δ2H) isotope composition of precipitation, soil and plants have been studied over the years to understand the mechanism of soil water movement and the depth of plant water uptake in the soil water profile. Recent studies have suggested that in soil during the wet season, tightly bound water does not mix with mobile water but is retained in the soil until the dry season when it is taken up by plants via the force of transpiration. To test this, we sampled δ18O and δ2H in plant stems as a proxy for wet season mobile water and dry season bound water in two types of soils to determine if mixing occurs between mobile and tightly bound soil water. Plastic pots were filled with clay or very gravelly loam soil and a Persea americana tree was planted in each pot. Soil in each pot was first saturated with tap water to fully label the bound water with the isotopic identity of tap water and then fully saturated with either tap water (T) or isotopically-enriched pool water (P) and covered with white polyethylene to prevent evaporation. After saturating the soil, δ18O and δ2H of water draining from each pot were similar to those of water added to each pot for both the T and P treatments. For each treatment, δ18O and δ2H in plant stems were sampled 2-3 days after soil was initially saturated (simulated wet season; soil tension < 0.10 kPa) representing the mobile water and again 7-9 days after soil was saturated representing the bound water (simulated dry season; soil tension > 80.0 kPa). During the "dry season", there was a significant difference between T and P treatments for δ18O and δ2H in plant stems, indicating that bound water accessed by plants in the P treatment did not retain the tap water label and mixing occurred between mobile and bound water in the soil. Comparing P-T in the wet season with P-T in the dry season indicated that as much as 95% of water freely exchanged between the mobile and bound components of the soil. This is contrary to recent studies suggesting that no mixing occurs.

Unraveling the mechanisms underlying pulse dynamics of soil respiration in tropical dry forests

DOE PAGES

Waring, Bonnie G.; Powers, Jennifer S.

2016-10-14

Tropical dry forests are already undergoing changes in the quantity and timing of rainfall, but there is great uncertainty over how these shifts will affect belowground carbon (C) cycling. While it has long been known that dry soils quickly release carbon dioxide (CO 2) upon rewetting, the mechanisms underlying the so-called 'Birch effect' are still debated. Here, we quantified soil respiration pulses and their biotic predictors in response to simulated precipitation events in a regenerating tropical dry forest in Costa Rica. We also simulated the observed rewetting CO 2 pulses with two soil carbon models: a conventional model assuming first-ordermore » decay rates of soil organic matter, and an enzyme-catalyzed model with Michaelis–Menten kinetics. We found that rewetting of dry soils produced an immediate and dramatic pulse of CO 2, accompanied by rapid immobilization of nitrogen into the microbial biomass. However, the magnitude of the rewetting CO 2 pulse was highly variable at fine spatial scales, and was well correlated with the size of the dissolved organic C pool prior to rewetting. Both the enzyme-catalyzed and conventional models were able to reproduce the Birch effect when respiration was coupled directly to microbial C uptake, although models differed in their ability to yield realistic estimates of SOC and microbial biomass pool sizes and dynamics. Lastly, our results suggest that changes in the timing and intensity of rainfall events in tropical dry forests will exert strong influence on ecosystem C balance by affecting the dynamics of microbial biomass growth.« less

Unraveling the mechanisms underlying pulse dynamics of soil respiration in tropical dry forests

DOE Office of Scientific and Technical Information (OSTI.GOV)

Waring, Bonnie G.; Powers, Jennifer S.

Tropical dry forests are already undergoing changes in the quantity and timing of rainfall, but there is great uncertainty over how these shifts will affect belowground carbon (C) cycling. While it has long been known that dry soils quickly release carbon dioxide (CO 2) upon rewetting, the mechanisms underlying the so-called 'Birch effect' are still debated. Here, we quantified soil respiration pulses and their biotic predictors in response to simulated precipitation events in a regenerating tropical dry forest in Costa Rica. We also simulated the observed rewetting CO 2 pulses with two soil carbon models: a conventional model assuming first-ordermore » decay rates of soil organic matter, and an enzyme-catalyzed model with Michaelis–Menten kinetics. We found that rewetting of dry soils produced an immediate and dramatic pulse of CO 2, accompanied by rapid immobilization of nitrogen into the microbial biomass. However, the magnitude of the rewetting CO 2 pulse was highly variable at fine spatial scales, and was well correlated with the size of the dissolved organic C pool prior to rewetting. Both the enzyme-catalyzed and conventional models were able to reproduce the Birch effect when respiration was coupled directly to microbial C uptake, although models differed in their ability to yield realistic estimates of SOC and microbial biomass pool sizes and dynamics. Lastly, our results suggest that changes in the timing and intensity of rainfall events in tropical dry forests will exert strong influence on ecosystem C balance by affecting the dynamics of microbial biomass growth.« less

Unraveling the mechanisms underlying pulse dynamics of soil respiration in tropical dry forests

NASA Astrophysics Data System (ADS)

Waring, Bonnie G.; Powers, Jennifer S.

2016-10-01

Tropical dry forests are already undergoing changes in the quantity and timing of rainfall, but there is great uncertainty over how these shifts will affect belowground carbon (C) cycling. While it has long been known that dry soils quickly release carbon dioxide (CO2) upon rewetting, the mechanisms underlying the so-called ‘Birch effect’ are still debated. Here, we quantified soil respiration pulses and their biotic predictors in response to simulated precipitation events in a regenerating tropical dry forest in Costa Rica. We also simulated the observed rewetting CO2 pulses with two soil carbon models: a conventional model assuming first-order decay rates of soil organic matter, and an enzyme-catalyzed model with Michaelis-Menten kinetics. We found that rewetting of dry soils produced an immediate and dramatic pulse of CO2, accompanied by rapid immobilization of nitrogen into the microbial biomass. However, the magnitude of the rewetting CO2 pulse was highly variable at fine spatial scales, and was well correlated with the size of the dissolved organic C pool prior to rewetting. Both the enzyme-catalyzed and conventional models were able to reproduce the Birch effect when respiration was coupled directly to microbial C uptake, although models differed in their ability to yield realistic estimates of SOC and microbial biomass pool sizes and dynamics. Our results suggest that changes in the timing and intensity of rainfall events in tropical dry forests will exert strong influence on ecosystem C balance by affecting the dynamics of microbial biomass growth.

Impact of water repellency on infiltration of differently concentrated ethanol solutions

NASA Astrophysics Data System (ADS)

Dlapa, Pavel; Hrabovský, Andrej; Hriník, Dávid; Kuric, Peter

2017-04-01

Infiltration experiments were carried out on an extremely (WDPT > 3600 s) water repellent forest soil in the Little Carpathians Mts (SW Slovakia). Measurements were performed following a long dry warm period using the Mini Disk Infiltrometer (Decagon). Replicated infiltration experiments were conducted with water and five different ethanol solutions. The infiltrometer was set to a capillary pressure head of -2 cm and filled with solutions containing 0, 5, 10, 20, 40, and 95% of ethanol by volume, respectively. Solutions used in infiltration experiments differed in density, viscosity, and surface tension. Combined effect of solution properties on infiltration into soil is strongly dependent on soil surface properties. This may lead to a decrease of infiltration rate with increasing ethanol concentration. Such behaviour should be observable in wettable soils. However, the infiltration experiments revealed a significant increase in the rate of infiltration for increasing concentrations of ethanol. The solutions showed infiltration rates of 10-4, 10-3, and 10-2 cm/s for the 5, 20, and 95% ethanol solutions, respectively. This trend suggests the dominant influence of contact angle (affected by ethanol concentration) on infiltration process. Measurements allow quantifying changes of various infiltration parameters as a function of the solution properties. The obtained results showed that similar approach can be a valuable alternative to other methods used for the evaluation of severity of soil repellency and impacts to hydrological processes.

DOE Office of Scientific and Technical Information (OSTI.GOV)

RoyChowdhury, Taniya; Bramer, Lisa; Hoyt, David W.

Earth System Models predict climate extremes that will impact regional and global hydrology. Aquatic-terrestrial transition zones like wetlands are subjected to the immediate consequence of climate change with shifts in the magnitude and dynamics of hydrologic flow. Such fluctuating hydrology can alter the nature and rate of biogeochemical transformations and significantly impact the carbon balance of the ecosystem. We tested the impacts of fluctuating hydrology and, specifically, the role of antecedent moisture conditions in determining the dominant carbon loss mechanisms in soils sampled from a tidal freshwater wetland system in the lower Columbia River, WA, USA. The objective was tomore » understand shifts in biogeochemical processes in response to changing soil moisture, based on soil respiration and methane production rates, and to elucidate such responses based on the observed electron acceptor and metabolite profiles under laboratory conditions. Metabolomics and biogeochemical process rates provided evidence that soil redox was the principal factor driving metabolic function. Fluctuating redox conditions altered terminal electron acceptor and donor availability and recovery strengths of their concentrations in soil such that a disproportionate release of carbon dioxide stemmed from alternative anaerobic degradation processes like sulfate and iron reduction compared to carbon loss due to methanogenesis. These results show that extended and short-term saturation created conditions conducive to increasing metabolite availability for anaerobic decomposition processes, with a significant lag in methanogenesis. In contrast, extended drying caused a cellular-level stress response and rapid recycling of alternate electron acceptors.« less

Root growth and water relations of oak and birch seedlings.

PubMed

Osonubi, O; Davies, W J

1981-01-01

First year seedlings of English oak (Quercus Cobur) and silver birch (Betula pendula) were subjected to pressure-volume analysis to investigate the water potential components and cell wall properties of single leaves. It was hoped that this rapid-drying technique would differentiate between reductions in plant solute potential resulting from dehydration and the effects of solute accumulation.Comparison of results from these experiments with those of slow drying treatments (over a number of days) with plants growing in tubes of soil, indicated that some solute accumulation may have occurred in drying oak leaves. High leaf turgor and leaf conductance were maintained for a significant period of the drying cycle. Roots of well-watered oak plants extended deep into the soil profile, and possibly as a result of solute regulation and therefore turgor maintenance, root growth of unwatered plants was greater than that of their well-watered counterparts. This was particularly the case deep in the profile. As a result of deep root penetration, water deep in the soil core was used by oak plants to maintain plant turgor, and quite low soil water potentials were recorded in the lower soil segments.Root growth of well-watered birch seedlings was prolific but roots of both well-watered and unwatered plants were restricted to the upper part of the profile. Root growth of unwatered plants was reduced despite the existence of high soil water potentials deep in the profile. Shallow rooting birch seedlings were unable to use this water.Pressure-volume analysis indicated that significant reductions of water potential, which are required for water uptake from drying soil, would occur in oak with only a small reduction in plant water content compared to the situation in birch. This was a result of the low solute potential in oak leaves combined with a high modulus of elasticity of cell walls. Deep rooting of oak seedlings, combined with these characteristics, which will be particularly important when soil deep in the profile begins to dry, mean that this species may be comparatively successful when growing on dry sites.

Soil Water Adsorption and Evaporation During the Dry Season in an Arid Zone

NASA Astrophysics Data System (ADS)

Agam, N.; Berliner, P. R.

2004-12-01

The purpose of this study was to describe the daily pattern of changes in water content in the upper soil layers of a bare loess soil in the Negev desert throughout the dry season and to assess the corresponding relative magnitude of latent heat flux density. The measurements were carried out in the Northern Negev, Israel, over a bare loess soil, during nine 24-h field campaigns throughout the dry season of 2002. In addition to a micrometeorological station that was set up in the research site, an improved micro-lysimeter was installed. During each campaign, the 100-mm topsoil was sampled hourly, and water content at ten mm increments was obtained. A clear discernible daily cycle of water content in the upper soil layers was observed due to direct adsorption of water vapor by the soil and consequent evaporation. Although the water content of the uppermost soil is significantly lower than the wilting point, for which most of the commonly used meteorological models would assume no latent heat flux, the latter was ˜20% of the net-radiation during the night and 10-15% during the day. It is, therefore, concluded that latent heat flux plays a major role in the dissipation of the net radiation during the dry season in the Negev desert.

Multigeneration toxicity of imidacloprid and thiacloprid to Folsomia candida.

PubMed

van Gestel, Cornelis A M; de Lima E Silva, Claudia; Lam, Thao; Koekkoek, Jacco C; Lamoree, Marja H; Verweij, Rudo A

2017-04-01

In a recent study, we showed that the springtail Folsomia candida was quite sensitive the neonicotinoid insecticides imidacloprid and thiacloprid. This study aimed at determining the toxicity of both compounds to F. candida following exposure over three generations, in natural LUFA 2.2 standard soil. In the first generation, imidacloprid was more toxic than thiacloprid, with LC 50 s of 0.44 and 9.0 mg/kg dry soil, respectively and EC 50 s of 0.29 and 1.5 mg/kg dry soil, respectively. The higher LC 50 /EC 50 ratio suggests that thiacloprid has more effects on reproduction, while imidacloprid shows lethal toxicity to the springtails. In the multigeneration tests, using soil spiked at the start of the first generation exposures, imidacloprid had a consistent effect on survival and reproduction in all three generations, with LC 50 s and EC 50 s of 0.21-0.44 and 0.12-0.29 mg/kg dry soil, respectively, while thiacloprid-exposed animals showed clear recovery in the second and third generations (LC 50 and EC 50  > 3.33 mg/kg dry soil). The latter finding is in agreement with the persistence of imidacloprid and the fast degradation of thiacloprid in the test soil.

Content of selected elements in Boletus badius fruiting bodies growing in extremely polluted wastes.

PubMed

Mleczek, Mirosław; Siwulski, Marek; Mikołajczak, Patrycja; Gąsecka, Monika; Sobieralski, Krzysztof; Szymańczyk, Mateusz; Goliński, Piotr

2015-01-01

The aim of the study was to analyse levels of 17 trace elements and 5 major minerals in 11 Boletus badius fruiting bodies able to grow in extremely polluted waste (flotation tailings) and polluted soil in southern Poland. The presented data widen the limited literature data about the abilities of wild-growing mushroom species to grow on heavily contaminated substrates. Content of elements in waste, soil and mushrooms was analysed by flame atomic absorption spectrometry (FAAS) and cold vapour atomic absorption spectrometry (CVAAS - Hg). The industrial areas differed greatly as regards the content of elements in flotation tailings and soil; therefore differences in Ag, Ba, Cd, Co, Fe, Mo, Ni, Pb, Ca, K, Mg, Na and P accumulation in mushrooms were observed. The highest contents of elements in mushrooms were observed for: As, Al, Cu and Zn (86 ± 28, 549 ± 116, 341 ± 59 and 506 ± 40 mg kg(-1) dry matter, respectively). Calculated bioconcentration factor (BCF) values were higher than 1 for Al (15.1-16.9), Fe (10.6-24.4) and Hg (10.2-16.4) only. The main value of the presented results is the fact that one of the common wild-growing mushroom species was able to grow on flotation tailings containing over 22 g kg(-1) of As and, additionally, effective accumulation of other elements was observed. In view of the high content of the majority of analysed elements in fruiting bodies, edible mushrooms from such polluted areas are nonconsumable.

Production and retention of methylmercury in inundated boreal forest soils.

PubMed

Rolfhus, Kristofer R; Hurley, James P; Bodaly, Richard A Drew; Perrine, Gregory

2015-03-17

The Flooded Uplands Dynamics Experiment (FLUDEX) was an ecosystem-scale study examining the production of methylmercury (MeHg) and greenhouse gases from reservoirs constructed on an upland boreal forest landscape in order to quantify their dependence upon carbon stores. We detail the within-reservoir production and storage of MeHg before, during, and nine years after the experiment. The reservoirs were net MeHg producers during the first two years of flooding, and net demethylating systems afterward. During years 1-3, a rapid pulse of MeHg and total Hg was observed in floodwater, followed by substantial increases in MeHg in seston and sediment. Resampling of the dry reservoirs nine years after the experiment ended indicated that organic soil MeHg was still 8 to 52-fold higher than preflood conditions, and averaged 86% of the levels recorded at the end of the third flooding year. Both total Hg and MeHg retention in soil were a strong function of organic carbon content. The time scale of soil MeHg retention may help explain the decadal time lag frequently observed for the decrease of piscivorous fish Hg concentrations in new reservoirs. Predicted extreme precipitation events associated with climate change may serve to make landscapes more susceptible to this process.

On the weathering of Martian igneous rocks

NASA Technical Reports Server (NTRS)

Dreibus, G.; Waenke, H.

1992-01-01

Besides the young crystallization age, one of the first arguments for the martian origin of shergottite, nakhlite, and chassignite (SNC) meteorites came from the chemical similarity of the meteorite Shergotty and the martian soil as measured by Viking XRF analyses. In the meantime, the discovery of trapped rare gas and nitrogen components with element and isotope ratios closely matching the highly characteristic ratios of the Mars atmosphere in the shock glasses of shergottite EETA79001 was further striking evidence that the SNC's are martian surface rocks. The martian soil composition as derived from the Viking mission, with its extremely high S and Cl concentrations, was interpreted as weathering products of mafic igneous rocks. The low SiO2 content and the low abundance of K and other trace elements in the martian soils point to a mafic crust with a considerably smaller degree of fractionation compared to the terrestrial crust. However, the chemical evolution of the martian regolith and soil in respect to surface reaction with the planetary atmosphere or hydrosphere is poorly understood. A critical point in this respect is that the geochemical evidence as derived from the SNC meteorites suggests that Mars is a very dry planet that should have lost almost all its initially large water inventory during its accretion.

Long-term acclimatization of hydraulic properties, xylem conduit size, wall strength and cavitation resistance in Phaseolus vulgaris in response to different environmental effects.

PubMed

Holste, Ellen K; Jerke, Megan J; Matzner, Steven L

2006-05-01

Phaseolus vulgaris grown under various environmental conditions was used to assess long-term acclimatization of xylem structural characteristics and hydraulic properties. Conduit diameter tended to be reduced and 'wood' density (of 'woody' stems) increased under low moisture ('dry'), increased soil porosity ('porous soil') and low phosphorus ('low P') treatments. Dry and low P had the largest percentage of small vessels. Dry, low light ('shade') and porous soil treatments decreased P50 (50% loss in conductivity) by 0.15-0.25 MPa (greater cavitation resistance) compared with 'controls'. By contrast, low P increased P50 by 0.30 MPa (less cavitation resistance) compared with porous soil (the control for low P). Changes in cavitation resistance were independent of conduit diameter. By contrast, changes in cavitation resistance were correlated with wood density for the control, dry and porous soil treatments, but did not appear to be a function of wood density for the shade and low P treatments. In a separate experiment comparing control and porous soil plants, stem hydraulic conductivity (kh), specific conductivity (ks), leaf specific conductivity (LSC), total pot water loss, plant biomass and leaf area were all greater for control plants compared to porous soil plants. Porous soil plants, however, demonstrated higher midday stomatal conductance to water vapour (gs), apparently because they experienced proportionally less midday xylem cavitation.

Negative soil moisture-precipitation feedback in dry and wet regions.

PubMed

Yang, Lingbin; Sun, Guoqing; Zhi, Lu; Zhao, Jianjun

2018-03-05

Soil moisture-precipitation (SM-P) feedback significantly influences the terrestrial water and energy cycles. However, the sign of the feedback and the associated physical mechanism have been debated, leaving a research gap regarding global water and climate changes. Based on Koster's framework, we estimate SM-P feedback using satellite remote sensing and ground observation data sets. Methodologically, the sign of the feedback is identified by the correlation between monthly soil moisture and next-month precipitation. The physical mechanism is investigated through coupling precipitation and soil moisture (P-SM), soil moisture ad evapotranspiration (SM-E) and evapotranspiration and precipitation (E-P) correlations. Our results demonstrate that although positive SM-P feedback is predominant over land, non-negligible negative feedback occurs in dry and wet regions. Specifically, 43.75% and 40.16% of the negative feedback occurs in the arid and humid climate zones. Physically, negative SM-P feedback depends on the SM-E correlation. In dry regions, evapotranspiration change is soil moisture limited. In wet regions, evapotranspiration change is energy limited. We conclude that the complex SM-E correlation results in negative SM-P feedback in dry and wet regions, and the cause varies based on the environmental and climatic conditions.

Soil moisture and biogeochemical factors influence the distribution of annual Bromus species

USGS Publications Warehouse

Belnap, Jayne; Stark, John Thomas; Rau, Benjamin; Allen, Edith B.; Phillips, Sue

2016-01-01

Abiotic factors have a strong influence on where annual Bromus species are found. At the large regional scale, temperature and precipitation extremes determine the boundaries of Bromusoccurrence. At the more local scale, soil characteristics and climate influence distribution, cover, and performance. In hot, dry, summer-rainfall-dominated deserts (Sonoran, Chihuahuan), little or noBromus is found, likely due to timing or amount of soil moisture relative to Bromus phenology. In hot, winter-rainfall-dominated deserts (parts of the Mojave Desert), Bromus rubens is widespread and correlated with high phosphorus availability. It also responds positively to additions of nitrogen alone or with phosphorus. On the Colorado Plateau, with higher soil moisture availability, factors limiting Bromus tectorum populations vary with life stage: phosphorus and water limit germination, potassium and the potassium/magnesium ratio affect winter performance, and water and potassium/magnesium affect spring performance. Controlling nutrients also change with elevation. In cooler deserts with winter precipitation (Great Basin, Columbia Plateau) and thus even greater soil moisture availability, B. tectorum populations are controlled by nitrogen, phosphorus, or potassium. Experimental nitrogen additions stimulate Bromus performance. The reason for different nutrients limiting in dissimilar climatic regions is not known, but it is likely that site conditions such as soil texture (as it affects water and nutrient availability), organic matter, and/or chemistry interact in a manner that regulates nutrient availability and limitations. Under future drier, hotter conditions,Bromus distribution is likely to change due to changes in the interaction between moisture and nutrient availability.

Effects of Rainfall-Induced Topsoil Structure Changes on Root-Zone Moisture Regime during the Dry Period

NASA Astrophysics Data System (ADS)

Wang, Feng; Chen, Jiazhou; Lin, Lirong

2018-01-01

Rainfall erosion and subsequent intermittent drought are serious barriers for agricultural production in the subtropical red soil region of China. Although it is widely recognized that rainfall-induced soil structure degradation reduced soil water storage and water-holding capacity, the effects of variation of the rainfall-induced topsoil structure on the subsequent soil water regime during the dry period is still rarely considered. The objective of this study was to ascertain the way of rainfall-induced topsoil structure changes on the subsequent soil water regime during the dry period. In a three-year-long experiment, six practices (CK, only crop; SM, straw mulching; PAM, polyacrylamide surface application; B, contour Bahia-grass strip; SPAM, straw mulching and polyacrylamide surface application; and BPAM, contour Bahia-grass strip and polyacrylamide surface application) were conducted at an 8° farmland with planting summer maize resulting in different topsoil structure and root-zone moisture, to establish and reveal the quantitatively relationship between the factors of topsoil structure and soil drought. Rainfall erosion significantly increased the soil crust coverage, and decreased the WSA 0.25, 0-30 mm soil porosity and mean pore size. There was no significant difference during the raining stage of root-zone water storage between CK and other practices. An index of soil drought intensity ( I) and degree ( D) was established using soil water loss rate and soil drought severity. The larger value of I means a higher rate of water loss. The larger value of D means more severe drought. During the dry period, I and D were significantly higher in CK than in other practices. I and D had significantly positively correlation with the crust size and crust coverage, and negatively with WSA 0.25, 15-30 mm soil porosity and mean pore size. Among of soil structure factors, the soil porosity had the largest effect on I and D. The rainfall-induced topsoil structure changes greatly deteriorated the root-zone regime during the dry period mainly due to significant increasing soil water loss but little improving the raining stage of soil water storage. Straw mulching had greater effects than other practices in alleviating rainfall-induced erosion and intermittent drought, and could be a better strategy applied for this region.

Former land-use and tree species affect nitrogen oxide emissions from a tropical dry forest.

Treesearch

Heather Erickson; Eric A. Davidson; Michael Keller

2002-01-01

Species composition in successional dry forests in the tropics varies widely, but the effect of this variation on biogeochemical processes is not well known. We examined fluxes of N oxides (nitrous and nitric oxide), soil N cycling, and litter chemistry (C/N ratio) in four successional dry forests on similar soils in western Puerto Rico with differing species...

Environmental microbiology as related to planetary quarantine

NASA Technical Reports Server (NTRS)

Pflug, I. J.

1974-01-01

Continued experimental work related to dry heat resistance of microorganisms. One phase of this research has been concerned with the viability and dry heat resistance of indigenous microflora associated with small soil particles. The second part of this report is an analysis of the present status of dry heat sterilization. An attempt is made to integrate results for both laboratory grown spores and spores in soil.

How did climate drying reduce ecosystem carbon storage in the forest-steppe ecotone? A case study in Inner Mongolia, China.

PubMed

Zhang, Yuke; Liu, Hongyan

2010-07-01

The projected recession of forests in the forest-steppe ecotone under projected climate drying would restrict the carbon sink function of terrestrial ecosystems. Previous studies have shown that the forest-steppe ecotone in the southeastern Inner Mongolia Plateau originally resulted from climate drying and vegetation shifts during the mid- to late-Holocene, but the interrelated processes of changing soil carbon storage and vegetation and soil shifts remain unclear. A total of 44 forest soil profiles and 40 steppe soil profiles were excavated to determine soil carbon storage in deciduous broadleaf forests (DBF), coniferous forests (CF) and steppe (ST) in this area. Carbon density was estimated to be 106.51 t/hm(2) (DBF), 73.20 t/hm(2) (CF), and 28.14 t/hm(2) (ST) for these ecosystems. Soil organic carbon (SOC) content was negatively correlated with sand content (R = -0.879, P < 0.01, n = 42), and positively correlated with silt (R = 0.881, P < 0.01, n = 42) and clay (R = 0.858, P < 0.01, n = 42) content. Consistent trends between fractions of coarse sand and a proxy index of relative aridity in sediment sequences from two palaeo-lakes further imply that climate drying reduced SOC through coarsening of the soil texture in the forest-steppe ecotone. Changes in carbon storage caused by climate drying can be divided into two stages: (1) carbon storage of the ecosystem was reduced to 68.7%, mostly by soil coarsening when DBF were replaced by CF at approximately 5,900 (14)C years before present (BP); and (2) carbon storage was reduced to 26.4%, mostly by vegetation shifts when CF were replaced by ST at approximately 2,900 (14)C years BP.

Effects of the Extended Water Retention Curve on Coupled Heat and Water Transport in the Vadose Zone

NASA Astrophysics Data System (ADS)

Yang, Z.; Mohanty, B.

2017-12-01

Understanding and simulating coupled heat and water transfer appropriately in the shallow subsurface is of vital significance for accurate prediction of soil evaporation that would improve the coupling between land surface and atmosphere. The theory of Philip and de Vries (1957) and its extensions (de Vries, 1958; Milly, 1982), although physically incomplete, are still adopted successfully to describe the coupled heat and water movement in field soils. However, the adsorptive water retention, which was ignored in Philip and de Vries theory and its extensions for characterizing soil hydraulic parameters, was shown to be non-negligible for soil moisture and evaporation flux calculation in dry field soils based on a recent synthetic analysis (Mohanty and Yang, 2013). In this study, we attempt to comprehensively investigate the effects of full range water retention curve on coupled heat and water transport simulation with a focus on soil moisture content, temperature and soil evaporative flux, based on two synthetic (sand and loam) and two field sites (Riverside, California and Audubon, Arizona) analysis. The results of synthetic sand and loam numerical modeling showed that when neglecting the adsorptive water retention, the resulting simulated soil water content would be larger, and the evaporative flux would be lower, respectively, compared to that obtained by the full range water retention curve mode. The simulated temperature did not show significant difference with or without accounting for adsorptive water retention. The evaporation underestimation when neglecting the adsorptive water retention is mainly caused by isothermal hydraulic conductivity underprediction. These synthetic findings were further corroborated by the Audubon, Arizona field site experimental results. The results from Riverside, California field experimental site showed that the soil surface can reach very dry status, although the soil profile below the drying front is not dry, which also to some extent justifies the necessity of employing full range water retention function in such generally not quite dry scenarios.

The Resilience of Microbial Community under Drying and Rewetting Cycles of Three Forest Soils.

PubMed

Zhou, Xue; Fornara, Dario; Ikenaga, Makoto; Akagi, Isao; Zhang, Ruifu; Jia, Zhongjun

2016-01-01

Forest soil ecosystems are associated with large pools and fluxes of carbon (C) and nitrogen (N), which could be strongly affected by variation in rainfall events under current climate change. Understanding how dry and wet cycle events might influence the metabolic state of indigenous soil microbes is crucial for predicting forest soil responses to environmental change. We used 454 pyrosequencing and quantitative PCR to address how present (DNA-based) and potentially active (RNA-based) soil bacterial communities might response to the changes in water availability across three different forest types located in two continents (Africa and Asia) under controlled drying and rewetting cycles. Sequencing of rRNA gene and transcript indicated that Proteobacteria, Actinobacteria, and Acidobacteria were the most responsive phyla to changes in water availability. We defined the ratio of rRNA transcript to rRNA gene abundance as a key indicator of potential microbial activity and we found that this ratio was increased following soil dry-down process whereas it decreased after soil rewetting. Following rewetting Crenarchaeota-like 16S rRNA gene transcript increased in some forest soils and this was linked to increases in soil nitrate levels suggesting greater nitrification rates under higher soil water availability. Changes in the relative abundance of (1) different microbial phyla and classes, and (2) 16S and amoA genes were found to be site- and taxa-specific and might have been driven by different life-strategies. Overall, we found that, after rewetting, the structure of the present and potentially active bacterial community structure as well as the abundance of bacterial (16S), archaeal (16S) and ammonia oxidizers (amoA), all returned to pre-dry-down levels. This suggests that microbial taxa have the ability to recover from desiccation, a critical response, which will contribute to maintaining microbial biodiversity in harsh ecosystems under environmental perturbations, such as significant changes in water availability.

The Resilience of Microbial Community under Drying and Rewetting Cycles of Three Forest Soils

PubMed Central

Zhou, Xue; Fornara, Dario; Ikenaga, Makoto; Akagi, Isao; Zhang, Ruifu; Jia, Zhongjun

2016-01-01

Forest soil ecosystems are associated with large pools and fluxes of carbon (C) and nitrogen (N), which could be strongly affected by variation in rainfall events under current climate change. Understanding how dry and wet cycle events might influence the metabolic state of indigenous soil microbes is crucial for predicting forest soil responses to environmental change. We used 454 pyrosequencing and quantitative PCR to address how present (DNA-based) and potentially active (RNA-based) soil bacterial communities might response to the changes in water availability across three different forest types located in two continents (Africa and Asia) under controlled drying and rewetting cycles. Sequencing of rRNA gene and transcript indicated that Proteobacteria, Actinobacteria, and Acidobacteria were the most responsive phyla to changes in water availability. We defined the ratio of rRNA transcript to rRNA gene abundance as a key indicator of potential microbial activity and we found that this ratio was increased following soil dry-down process whereas it decreased after soil rewetting. Following rewetting Crenarchaeota-like 16S rRNA gene transcript increased in some forest soils and this was linked to increases in soil nitrate levels suggesting greater nitrification rates under higher soil water availability. Changes in the relative abundance of (1) different microbial phyla and classes, and (2) 16S and amoA genes were found to be site- and taxa-specific and might have been driven by different life-strategies. Overall, we found that, after rewetting, the structure of the present and potentially active bacterial community structure as well as the abundance of bacterial (16S), archaeal (16S) and ammonia oxidizers (amoA), all returned to pre-dry-down levels. This suggests that microbial taxa have the ability to recover from desiccation, a critical response, which will contribute to maintaining microbial biodiversity in harsh ecosystems under environmental perturbations, such as significant changes in water availability. PMID:27486444

Relationship between specific surface area and the dry end of the water retention curve for soils with varying clay and organic carbon contents

NASA Astrophysics Data System (ADS)

Resurreccion, Augustus C.; Moldrup, Per; Tuller, Markus; Ferré, T. P. A.; Kawamoto, Ken; Komatsu, Toshiko; de Jonge, Lis Wollesen

2011-06-01

Accurate description of the soil water retention curve (SWRC) at low water contents is important for simulating water dynamics and biochemical vadose zone processes in arid environments. Soil water retention data corresponding to matric potentials of less than -10 MPa, where adsorptive forces dominate over capillary forces, have also been used to estimate soil specific surface area (SA). In the present study, the dry end of the SWRC was measured with a chilled-mirror dew point psychrometer for 41 Danish soils covering a wide range of clay (CL) and organic carbon (OC) contents. The 41 soils were classified into four groups on the basis of the Dexter number (n = CL/OC), and the Tuller-Or (TO) general scaling model describing water film thickness at a given matric potential (<-10 MPa) was evaluated. The SA estimated from the dry end of the SWRC (SA_SWRC) was in good agreement with the SA measured with ethylene glycol monoethyl ether (SA_EGME) only for organic soils with n > 10. A strong correlation between the ratio of the two surface area estimates and the Dexter number was observed and applied as an additional scaling function in the TO model to rescale the soil water retention curve at low water contents. However, the TO model still overestimated water film thickness at potentials approaching ovendry condition (about -800 MPa). The semi-log linear Campbell-Shiozawa-Rossi-Nimmo (CSRN) model showed better fits for all investigated soils from -10 to -800 MPa and yielded high correlations with CL and SA. It is therefore recommended to apply the empirical CSRN model for predicting the dry part of the water retention curve (-10 to -800 MPa) from measured soil texture or surface area. Further research should aim to modify the more physically based TO model to obtain better descriptions of the SWRC in the very dry range (-300 to -800 MPa).

Role of Biotic and Abiotic Processes on Soil CO2 Dynamics in the McMurdo Dry Valleys, Antarctica

NASA Astrophysics Data System (ADS)

Risk, D. A.; Macintyre, C. M.; Lee, C.; Cary, C.; Shanhun, F.; Almond, P. C.

2016-12-01

In the harsh conditions of the Antarctic Dry Valleys, microbial activity has been recorded via measurements of soil carbon dioxide (CO2) concentration and surface efflux. However, high temporal resolution studies in the Dry Valleys have also shown that abiotic solubility-driven processes can strongly influence (and perhaps even dominate) the CO2 dynamics in these low flux environments and suggests that biological activity may be lower than previously thought. In this study, we aim to improve our understanding of CO2 dynamics (biotic and abiotic) in Antarctic Dry Valley soils using long-term automated measurements of soil CO2 surface flux and soil profile concentration at several sites, often at sub-diel frequency. We hypothesize that soil CO2 variations are driven primarily by environmental factors affecting CO2 solubility in soil solution, mainly temperature, and that these processes may even overprint biologic production in representative Dry Valley soils. Monitoring of all sites revealed only one likely biotic CO2 production event, lasting three weeks during the Austral summer and reaching fluxes of 0.4 µmol/m2/s. Under more typical low flux conditions (<0.10 µmol/m2/s) we observed a cyclical daily sink/source pattern consistent with CO2 solubility cycling that would not generally have been evident with normal synoptic afternoon sampling campaigns. Subsurface CO2 monitoring and a lab-controlled Antarctic soil simulation experiment confirmed that abiotic processes are capable of dominating soil CO2 variability. Diel temperature cycles crossing the freezing boundary revealed a dual abiotic cycle of solubility cycling and gas exclusion from ice formation observed only by high temporal frequency measurements (30 min). This work demonstrates a need for a numerical model to partition the dynamic abiotic processes underlying any biotic CO2 production in order to understand potential climate-change induced increases in microbial productivity in terrestrial Antarctica.

Drying shrinkage problems in high-plastic clay soils in Oklahoma.

DOT National Transportation Integrated Search

2013-08-01

Longitudinal cracking in pavements due to drying shrinkage of high-plastic subgrade soils has been a major : problem in Oklahoma. Annual maintenance to seal and repair these distress problems costs significant amount of : money to the state. The long...

The emission of nitrous oxide upon wetting a rice soil following a dry season fallow

NASA Astrophysics Data System (ADS)

Byrnes, B. H.; Holt, L. S.; Austin, E. R.

1993-12-01

A greenhouse experiment was conducted to measure nitrous oxide (N2O) emissions from a soil, which had been planted to flooded transplanted rice, as it was rewetted to simulate the end of a dry season fallow period. The pots of soil had been cropped to transplanted rice with two commonly used nitrogen (N) fertilizer treatments and a control, and the soil had been puddled before transplanting. Large amounts of nitrate N accumulated in the soils during the dry season fallow, and the N fertilizers applied to the previous crop had little effect on nitrate accumulation. There was little N2O emission during the nitrification period. With water additions meant to simulate rainfall events at the beginning of a wet season, the soil redox dropped slightly, and large amounts of N2O began to be emitted. Large emissions began 5 days after each of the two simulated rainy season watering events and stopped abruptly at soil saturation, even though considerable amounts of nitrate still remained in the soil after saturation. Total measured emissions amounted to 6 to 7 kg N2O-N ha-1 for the period. Although these measurements were made in a system which may have favored nitrate accumulation, they are the first known measurements of N2O made from a rice soil as it is wetted. Nitrous oxide emitted from the flooding of rice soils that have accumulated nitrate during a dry season fallow may be a major source of N2O additions to the atmosphere.

Plant carnivory beyond bogs: reliance on prey feeding in Drosophyllum lusitanicum (Drosophyllaceae) in dry Mediterranean heathland habitats

PubMed Central

Gil-Cabeza, E.; Ojeda, F.

2017-01-01

Background and Aims In a cost–benefit framework, plant carnivory is hypothesized to be an adaptation to nutrient-poor soils in sunny, wetland habitats. However, apparent exceptions to this cost–benefit model exist, although they have been rarely studied. One of these exceptions is the carnivorous subshrub Drosophyllum lusitanicum, which thrives in Mediterranean heathlands on dry sandstone soils and has relatively well-developed, xeromorphic roots. Here, the roles of leaf (carnivory) and root (soil) nutrient uptake in growth promotion of this particular species were assessed. Methods In a greenhouse experiment, plants were fed with laboratory-reared fruit flies (Drosophila virilis) and received two concentrations of soil nutrients in a factorial design. Above-ground plant growth and final above- and below-ground dry biomass after 13 weeks were recorded. Nutrient uptake via roots was also evaluated, using stable nitrogen isotope analysis. Key Results Insect feeding resulted in significantly higher growth and above- and below-ground biomass compared with soil fertilization. No additional benefits of fertilization were discernable when plants were insect-fed, indicating that roots were not efficient in nutrient absorption. Conclusions The first evidence of strong reliance on insect prey feeding in a dry-soil carnivorous plant with well-developed roots is provided, suggesting that carnivory per se does not preclude persistence in dry habitats. Instead, the combination of carnivory and xeromorphic root features allows Drosophyllum to thrive on non-waterlogged soils. New evidence is added to recent research emphasizing the role of root systems of carnivorous plants in explaining their distribution, partly challenging the cost–benefit hypothesis. PMID:28065921

Soil biotic legacy effects of extreme weather events influence plant invasiveness

PubMed Central

Meisner, Annelein; De Deyn, Gerlinde B.; de Boer, Wietse; van der Putten, Wim H.

2013-01-01

Climate change is expected to increase future abiotic stresses on ecosystems through extreme weather events leading to more extreme drought and rainfall incidences [Jentsch A, et al. (2007) Front Ecol Environ 5(7):365–374]. These fluctuations in precipitation may affect soil biota, soil processes [Evans ST, Wallenstein MD (2012) Biogeochemistry 109:101–116], and the proportion of exotics in invaded plant communities [Jiménez MA, et al. (2011) Ecol Lett 14:1277–1235]. However, little is known about legacy effects in soil on the performance of exotics and natives in invaded plant communities. Here we report that drought and rainfall effects on soil processes and biota affect the performance of exotics and natives in plant communities. We performed two mesocosm experiments. In the first experiment, soil without plants was exposed to drought and/or rainfall, which affected soil N availability. Then the initial soil moisture conditions were restored, and a mixed community of co-occurring natives and exotics was planted and exposed to drought during growth. A single stress before or during growth decreased the biomass of natives, but did not affect exotics. A second drought stress during plant growth resetted the exotic advantage, whereas native biomass was not further reduced. In the second experiment, soil inoculation revealed that drought and/or rainfall influenced soil biotic legacies, which promoted exotics but suppressed natives. Our results demonstrate that extreme weather events can cause legacy effects in soil biota, promoting exotics and suppressing natives in invaded plant communities, depending on the type, frequency, and timing of extreme events. PMID:23716656

Successive chlorothalonil applications inhibit soil nitrification and discrepantly affect abundances of functional genes in soil nitrogen cycling.

PubMed

Teng, Ying; Zhang, Manyun; Yang, Guangmei; Wang, Jun; Christie, Peter; Luo, Yongming

2017-02-01

Broad-spectrum fungicide chlorothalonil (CTN) is successively applied into intensive agriculture soil. However, the impacts of successive CTN applications on soil nitrification and related microorganisms remain poorly understood. A microcosm study was conducted to reveal the effects of successive CTN applications on soil nitrification and functional genes involved in soil nitrogen (N) cycling. The CTN at the dosages of 5 mg kg -1 dry soil (RD) and 25 mg kg -1 dry soil (5RD) was successively applied into the test soil at 7-day intervals which resulted in the accumulations of CTN residues. After 28 days of incubation, CTN residues in the RD and 5RD treatments were 3.14 and 69.7 mg kg -1 dry soil respectively. Net nitrification rates in the RD and 5RD treatments were lower than that obtained from the blank control (CK). Real-time PCR analysis revealed that AOA and AOB amoA gene abundances were significantly decreased by CTN applications. Moreover, CTN applications also discrepantly decreased the abundances of functional genes involved in soil denitrification, with the exception of nosZ gene. Principal component analysis further supported the observation that successive CTN applications could result in enhanced ecological toxicity.

Effects of high- and low-intensity fires on soil properties and plant growth in a Bolivian dry forest

Treesearch

Deborah K. Kennard; H.L. Gholz

2001-01-01

We compared soil nutrient availabiiity and soil physical properties among four treatments (high-intensity fire, low- intensity fire, plant removal, and harvesting gap) and a control (intact forest understory) over a period of 18 months in a tropical dry forest in Bolivia. The effect of treatments on plant growth was tested using a shade intolerant tree species (

Dielectric constants of soils at microwave frequencies

NASA Technical Reports Server (NTRS)

Geiger, F. E.; Williams, D.

1972-01-01

A knowledge of the complex dielectric constant of soils is essential in the interpretation of microwave airborne radiometer data of the earth's surface. Measurements were made at 37 GHz on various soils from the Phoenix, Ariz., area. Extensive data have been obtained for dry soil and soil with water content in the range from 0.6 to 35 percent by dry weight. Measurements were made in a two arm microwave bridge and results were corrected for reflections at the sample interfaces by solution of the parallel dielectric plate problem. The maximum dielectric constants are about a factor of 3 lower than those reported for similar soils at X-band frequencies.

[Effects of altitudes on soil microbial biomass and enzyme activity in alpine-gorge regions.

PubMed

Cao, Rui; Wu, Fu Zhong; Yang, Wan Qin; Xu, Zhen Feng; Tani, Bo; Wang, Bin; Li, Jun; Chang, Chen Hui

2016-04-22

In order to understand the variations of soil microbial biomass and soil enzyme activities with the change of altitude, a field incubation was conducted in dry valley, ecotone between dry valley and mountain forest, subalpine coniferous forest, alpine forest and alpine meadow from 1563 m to 3994 m of altitude in the alpine-gorge region of western Sichuan. The microbial biomass carbon and nitrogen, and the activities of invertase, urease and acid phosphorus were measured in both soil organic layer and mineral soil layer. Both the soil microbial biomass and soil enzyme activities showed the similar tendency in soil organic layer. They increased from 2158 m to 3028 m, then decreased to the lowest value at 3593 m, and thereafter increased until 3994 m in the alpine-gorge region. In contrast, the soil microbial biomass and soil enzyme activities in mineral soil layer showed the trends as, the subalpine forest at 3028 m > alpine meadow at 3994 m > montane forest ecotone at 2158 m > alpine forest at 3593 m > dry valley at 1563 m. Regardless of altitudes, soil microbial biomass and soil enzyme activities were significantly higher in soil organic layer than in mineral soil layer. The soil microbial biomass was significantly positively correlated with the activities of the measured soil enzymes. Moreover, both the soil microbial biomass and soil enzyme activities were significantly positively correlated with soil water content, organic carbon, and total nitrogen. The activity of soil invertase was significantly positively correlated with soil phosphorus content, and the soil acid phosphatase was so with soil phosphorus content and soil temperature. In brief, changes in vegetation and other environmental factors resulting from altitude change might have strong effects on soil biochemical properties in the alpine-gorge region.

Diagnosing the Nature of Land-Atmosphere Coupling: A Case Study of Dry/Wet Extremes

NASA Technical Reports Server (NTRS)

Santanello, Joseph A., Jr.; Peters-Lidard, Christa; Kennedy, Aaron D.

2012-01-01

Land-atmosphere (L-A) interactions play a critical role in determining the diurnal evolution of land surface and planetary boundary layer (PBL) temperature and moisture states and fluxes. In turn, these interactions regulate the strength of the connection between surface moisture and precipitation in a coupled system. To address deficiencies in numerical weather prediction and climate models due to improper treatment of L-A interactions, recent studies have focused on development of diagnostics to quantify the strength and accuracy of the land-PBL coupling at the process-level. In this study, a diagnosis of the nature and impacts oflocalland-atmosphere coupling (LoCo) during dry and wet extreme conditions is presented using a combination of models and observations during the summers of2006-7 in the U.S. Southern Great Plains. Specifically, the Weather Research and Forecasting (WRF) model has been coupled to NASA's Land Information System (LIS), which provides a flexible and high-resolution representation and initialization of land surface physics and states. A range of diagnostics exploring the links and feedbacks between soil moisture and precipitation are examined for the dry/wet regimes of this region, along with the behavior and accuracy of different land-PBL scheme couplings under these conditions. In addition, we examine the impact of improved specification ofland surface states, anomalies, and fluxes that are obtained through the use of a hew optimization and uncertainty module in LIS, on the L-A coupling in WRF forecasts. Results demonstrate how LoCo diagnostics can be applied to coupled model components in the context of their integrated impacts on the process-chain connecting the land surface to the PBL and support of hydrological anomalies.

Influence of altered precipitation pattern on greenhouse gas emissions and soil enzyme activities in Pannonian soils

NASA Astrophysics Data System (ADS)

Forstner, Stefan Johannes; Michel, Kerstin; Berthold, Helene; Baumgarten, Andreas; Wanek, Wolfgang; Zechmeister-Boltenstern, Sophie; Kitzler, Barbara

2013-04-01

Precipitation patterns are likely to be altered due to climate change. Recent models predict a reduction of mean precipitation during summer accompanied by a change in short-term precipitation variability for central Europe. Correspondingly, the risk for summer drought is likely to increase. This may especially be valid for regions which already have the potential for rare, but strong precipitation events like eastern Austria. Given that these projections hold true, soils in this area will receive water irregularly in few, heavy rainfall events and be subjected to long-lasting dry periods in between. This pattern of drying/rewetting can alter soil greenhouse gas fluxes, creating a potential feedback mechanism for climate change. Microorganisms are the key players in most soil carbon (C) and nitrogen (N) transformation processes including greenhouse gas exchange. A conceptual model proposed by Schimel and colleagues (2007) links microbial stress-response physiology to ecosystem-scale biogeochemical processes: In order to cope with decreasing soil water potential, microbes modify resource allocation patterns from growth to survival. However, it remains unclear how microbial resource acquisition via extracellular enzymes and microbial-controlled greenhouse gas fluxes respond to water stress induced by soil drying/rewetting. We designed a laboratory experiment to test for effects of multiple drying/rewetting cycles on soil greenhouse gas fluxes (CO2, CH4, N2O, NO), microbial biomass and extracellular enzyme activity. Three soils representing the main soil types of eastern Austria were collected in June 2012 at the Lysimeter Research Station of the Austrian Agency for Health and Food Safety (AGES) in Vienna. Soils were sieved to 2mm, filled in steel cylinders and equilibrated for one week at 50% water holding capacity (WHC) for each soil. Then soils were separated into two groups: One group received water several times per week (C=control), the other group received water only once in two weeks (D=dry). Both groups received same water totals for each soil. At the end of each two week drying period, greenhouse gas fluxes were measured via an open-chamber-system (CO2, NO) and a closed-chamber-approach (CH4, N2O, CO2). Additional cylinders were harvested destructively to quantify inorganic N forms, microbial biomass C, N and extracellular enzyme activity (Cellulase, Xylanase, Protease, Phenoloxidase, Peroxidase). We hypothesize that after rewetting (1) rates of greenhouse gas fluxes will generally increase, as well as (2) extracellular enzyme activity indicating enhanced microbial activity. However, response may be different for gases and enzymes involved in the C and N cycle, respectively, as drying/rewetting stress may uncouple microbial mediated biogeochemical cycles. Results will be presented at the EGU General Assembly. Reference: Schimel, J., Balser, T.C., and Wallenstein, M. (2007). Microbial stress-response physiology and its implications for ecosystem function. Ecology 88, 1386-1394.

Ecological aspects of selenium effects on plant growth and species diversity in soils with elevated concentrations of salinity and selenium

DOE Office of Scientific and Technical Information (OSTI.GOV)

Huang, Zhangzhi.

1991-01-01

A field study was conducted in soils with elevated concentrations of salinity and selenium during 1986-1990 at Kesterson Reservoir, Merced County, California. The investigation was conducted in three stages of plant habitat restoration: (1) wet habitat, (2) dry habitat, and (3) fill dirt cover habitat. The total water extractable selenium concentrations of wet habitat, dry habitat and fill dirt cover habitat were 2260-3700, 90-670, and undetectable-37 [mu]g/kg dry soil, respectively. Among the vascular flowering plants, saltgrass (Distichlis spicata L.) was the dominant species in dry habitat, and cattail (Typha latifolia L.) was the dominant species in wet habitat in themore » evaporation ponds at Kesterson. High concentrations of selenium were found in Kesterson marsh plant species. In wet habitat, selenium concentrations averaged 12.50 ppm ([mu]g/g dry wt) in Distichlis spicata leaves, 15.20 ppm in Typha latifolia leaves and 4.10 ppm in Juncus mexicanus leaves, respectively. In dry habitat, the tissue selenium concentration was about 1.5 ppm for Distichlis spicata and 4 ppm for Atriplex species. In fill dirt cover habitat, plant tissue selenium concentrations ranged from 1 to 19 ppm. Biomass distribution, species richness, and selenium accumulation of plants were studied for four sites during 1988-1990. At two sites, the surface soil consisted of fill dirt. Another two sites were native-soil cover (including Kesterson sediment).« less

Event- and site-specific soil wetting and seasonal change in amount of soil water

USDA-ARS?s Scientific Manuscript database

Numerous studies have examined ways to characterize the central tendency of soil water within a field or watershed. Extreme changes in water content reveal more about water movement within the area. The purpose of this study was to determine if extreme soil water changes varied among sites, and to s...

Soil Moisture as an Estimator for Crop Yield in Germany

NASA Astrophysics Data System (ADS)

Peichl, Michael; Meyer, Volker; Samaniego, Luis; Thober, Stephan

2015-04-01

Annual crop yield depends on various factors such as soil properties, management decisions, and meteorological conditions. Unfavorable weather conditions, e.g. droughts, have the potential to drastically diminish crop yield in rain-fed agriculture. For example, the drought in 2003 caused direct losses of 1.5 billion EUR only in Germany. Predicting crop yields allows to mitigate negative effects of weather extremes which are assumed to occur more often in the future due to climate change. A standard approach in economics is to predict the impact of climate change on agriculture as a function of temperature and precipitation. This approach has been developed further using concepts like growing degree days. Other econometric models use nonlinear functions of heat or vapor pressure deficit. However, none of these approaches uses soil moisture to predict crop yield. We hypothesize that soil moisture is a better indicator to explain stress on plant growth than estimations based on precipitation and temperature. This is the case because the latter variables do not explicitly account for the available water content in the root zone, which is the primary source of water supply for plant growth. In this study, a reduced form panel approach is applied to estimate a multivariate econometric production function for the years 1999 to 2010. Annual crop yield data of various crops on the administrative district level serve as depending variables. The explanatory variable of major interest is the Soil Moisture Index (SMI), which quantifies anomalies in root zone soil moisture. The SMI is computed by the mesoscale Hydrological Model (mHM, www.ufz.de/mhm). The index represents the monthly soil water quantile at a 4 km2 grid resolution covering entire Germany. A reduced model approach is suitable because the SMI is the result of a stochastic weather process and therefore can be considered exogenous. For the ease of interpretation a linear functionality is preferred. Meteorological, phenological, geological, agronomic, and socio-economic variables are also considered to extend the model in order to reveal the proper causal relation. First results show that dry as well as wet extremes of SMI have a negative impact on crop yield for winter wheat. This indicates that soil moisture has at least a limiting affect on crop production.

Flexible C, N and P allocation in maize plants and soil microbial biomass under recurrent and long-term drought

NASA Astrophysics Data System (ADS)

Larionova, Alla; Semenov, Vyacheslav; Yevdokimov, Ilya; Blagodatskaya, Evgenia

2016-04-01

One of the negative effects of the global warming is increasing aridity worldwide. Alterations in plant and microbial C, N and P in response to drought events can differ considerably in magnitude and direction. Therefore, synchronization between C, N and P in plants, dissolved forms and microbial biomass in soil is of great interest. Our objective was to evaluate C:N:P stoichiometry relations in plants and soil as affected by moderate water shortage and severe drought with subsequent rewetting. We tested the sensitivity of stoichiometry ratios in plants, dissolved compounds and soil microbial biomass in greenhouse experiment with maize. Three treatments were used: i) control with constant soil moisture (CTL); ii) soil with constantly low wetness of 25% WHC (DRY) and iii) soil exposed to drying-rewetting events (DRW). N dynamics was the most sensitive to water stress in maize plants and soil, while P dynamics was almost unaffected by drought and rewetting. As a result, C:N and N:P ratios were also sensitive to water treatment indicating that C, N and P cycles were decoupled by the water stresses. High C:N ratios in CTL and low C:N ratios in DRY and DRW treatments indicate stoichiometric flexibility in plants and soil microbes. N allocation was found to respond to N shortage in CTL and increased salt concentrations in soil solution in DRY and DRW treatments. C:N:P stoichiometry in soil microbes was found flexible during active plant growth, while that at the end of growth season turned to almost homeostatic ratio. The research was supported by Russian Science Foundation (project 14-14-00625)

Should precipitation influence dust emission in global dust models?

NASA Astrophysics Data System (ADS)

Okin, Gregory

2016-04-01

Soil moisture modulates the threshold shear stress required to initiate aeolian transport and dust emission. Most of the theoretical and laboratory work that has confirmed the impact of soil moisture has appropriately acknowledged that it is the soil moisture of a surface layer a few grain diameters thick that truly controls threshold shear velocity. Global and regional models of dust emission include the effect of soil moisture on transport threshold, but most ignore the fact that only the moisture of the very topmost "active layer" matters. The soil moisture in the active layer can differ greatly from that integrated through the top 2, 5, 10, or 100 cm (surface layers used by various global models) because the top 2 mm of heavy texture soils dries within ~1/2 day while sandy soils dry within less than 2 hours. Thus, in drylands where dust emission occurs, it is likely that this top layer is drier than the underlying soil in the days and weeks after rain. This paper explores, globally, the time between rain events in relation to the time for the active layer to dry and the timing of high wind events. This analysis is carried out using the same coarse reanalyses used in global dust models and is intended to inform the soil moisture controls in these models. The results of this analysis indicate that the timing between events is, in almost all dust-producing areas, significantly longer than the drying time of the active layer, even when considering soil texture differences. Further, the analysis shows that the probability of a high wind event during the period after a rain where the surface is wet is small. Therefore, in coarse global models, there is little reason to include rain-derived soil moisture in the modeling scheme.

Effects and risk assessment of linear alkylbenzene sulfonates in agricultural soil. 1. Short-term effects on soil microbiology.

PubMed

Elsgaard, L; Petersen, S O; Debosz, K

2001-08-01

Linear alkylbenzene sulfonates (LAS) may occur in sewage sludge that is applied to agricultural soil, in which LAS can be inhibitory to biological activity. As a part of a broader risk assessment of LAS in the terrestrial environment, we tested the short-term effects of aqueous LAS on microbial parameters in a sandy agricultural soil that was incubated for up to 11 d. The assays included 10 microbial soil parameters; ethylene degradation; potential ammonium oxidation; potential dehydrogenase activity; beta-glucosidase activity; iron reduction; the populations of cellulolytic bacteria, fungi and actinomycetes; the basal soil respiration; and the phospholipid fatty acid (PLFA) content. Except for beta-glucosidase activity, basal respiration, and total PLFA content, all soil parameters were sensitive to LAS, with EC10 values in the range of less than 8 to 22 mg/kg dry weight. This probably reflected a similar mode of LAS toxicity, ascribed to cell membrane interactions, and showed that sensitivity to LAS was common for various soil microorganisms. The extracellular beta-glucosidase activity was rather insensitive to LAS (ECI10, 47 mg/kg dry wt), whereas the basal soil respiration was not inhibited even at 793 mg/kg dry weight. This was interpreted as a combined response of inhibited and stimulated compartments of the microbial community. The PLFA content, surprisingly, showed no decrease even at 488 mg/kg. In conclusion, LAS inhibited specific microbial activities, although this could not be deduced from the basal respiration or the total PLFA content. The lowest EC10 values for microbial soil parameters were slightly higher than the predicted no-effect concentrations recently derived for plants and soil fauna (approximately 5 mg/kg dry wt).

Does monensin in chicken manure from poultry farms pose a threat to soil invertebrates?

PubMed

Zižek, Suzana; Hrženjak, Rok; Kalcher, Gabrijela Tavčar; Srimpf, Karin; Semrov, Neva; Zidar, Primož

2011-04-01

Monensin is a carboxylic polyether ionophore used in the poultry industry as a coccidiostat. It enters the environment via manure from broiler farms. In spite of its potential presence in the environment, information concerning monensin residues in manure and soil and its toxicity to soil organisms are insufficient. In the present study, two beneficial soil invertebrate species, earthworms (Eisenia andrei) and woodlice (Porcellio scaber), were used to assess the toxicity of monensin. Animals were exposed to a range of monensin concentrations via soil or food. Earthworm reproduction was found to be the most susceptible endpoint (NOEC=3.5 mg kg(-1) dry soil; EC(50)=12.7 mg kg(-1) dry soil), while no adverse effects were recorded in isopods (NOEC⩾849mgkg(-1) dry soil, NOEC⩾357mgkg(-1) dry food). The obtained toxicity data were compared with potential concentrations of monensin in soil. In view of this, manure from broiler chickens treated with monensin at a poultry farm was sampled. According to monensin and nitrogen concentrations in the chicken manure and the degradation time of monensin, the predicted environmental concentration (PEC) was calculated. PEC of monensin is around 0.013 mg kg(-1) soil if manure is used after 3 months of composting and 0.05 mg kg(-1) soil if used without storage. Data for earthworm reproduction was used to estimate the predicted no-effect concentration (PNEC). If fresh chicken manure is applied to terrestrial ecosystems, the risk quotient (PEC/PNEC ratio) is above 1, which indicates that monensin might pose an environmental risk under certain conditions. To prevent this, it is strongly recommended to compost chicken manure for several months before using it as fertiliser. Copyright © 2010 Elsevier Ltd. All rights reserved.

Development of remote sensing techniques capable of delineating soils as an aid to soil survey

NASA Technical Reports Server (NTRS)

Coleman, T. L.; Montgomery, O. L.

1988-01-01

Eighty-one benchmark soils from Alabama, Georgia, Florida, Tennessee, and Mississippi were evaluated to determine the feasibility of spectrally differentiating among soil categories. Relationships among spectral properties that occur between soils and within soils were examined, using discriminant analysis. Soil spectral data were obtained from air-dried samples using an Exotech Model 20C field spectroradiometer (0.37 to 2.36 microns). Differentiating among the orders, suborders, great groups, and subgroups using reflectance spectra achieved varying percentages of accuracy. Six distinct reflectance curve forms were developed from the air-dried samples based on the shape and presence or absence of adsorption bands. Iron oxide and organic matter content were the dominant soil parameters affecting the spectral characteristics for differentiating among and between these soils.

Impacts of a water stress followed by an early frost event on beech (Fagus sylvatica L.) susceptibility to Scolytine ambrosia beetles - Research strategy and first results

NASA Astrophysics Data System (ADS)

La Spina, Sylvie; de Cannière, Charles; Molenberg, Jean-Marc; Vincke, Caroline; Deman, Déborah; Grégoire, Jean-Claude

2010-05-01

Climate change tends to induce more frequent abiotic and biotic extreme events, having large impacts on tree vitality. Weakened trees are then more susceptible to secondary insect outbreaks, as it happened in Belgium in the early 2000s: after an early frost event, secondary Scolytine ambrosia beetles attacks were observed on beech trees. In this study, we test if a combination of stress, i.e. a soil water deficit preceding an early frost, could render trees more attractive to beetles. An experimental study was set in autumn 2008. Two parcels of a beech forest were covered with plastic tents to induce a water stress by rain interception. The parcels were surrounded by 2-meters depth trenches to avoid water supply by streaming. Soil water content and different indicators of tree water use (sap flow, predawn leaf water potential, tree radial growth) were followed. In autumn 2010, artificial frost injuries will be inflicted to trees using dry ice. Trees attractivity for Scolytine insects, and the success of insect colonization will then be studied. The poster will focus on experiment setting and first results (impacts of soil water deficit on trees).

Stomatal control in tomato with ABA-deficient roots: response of grafted plants to soil drying.

PubMed

Holbrook, N Michele; Shashidhar, V R; James, Richard A; Munns, Rana

2002-06-01

The hypothesis that ABA produced by roots in drying soil is responsible for stomatal closure was tested with grafted plants constructed from the ABA-deficient tomato mutants, sitiens and flacca and their near-isogenic wild-type parent. Three types of experiments were conducted. In the first type, reciprocal grafts were made between the wild type and sitiens or flacca. Stomatal conductance accorded with the genotype of the shoot, not the root. Stomates closed in all of the grafted plants in response to soil drying, regardless of the root genotype, i.e. regardless of the ability of the roots to produce ABA. In the second type of experiment, wild-type shoots were grafted onto a split-root system consisting of one wild-type root grafted to one mutant (flacca or sitiens) root. Water was withheld from one root system, while the other was watered well so that the shoots did not experience any decline in water potential or loss of turgor. Stomates closed to a similar extent when water was withheld from the mutant roots or the wild-type roots. In the third type of experiment, grafted plants with wild-type shoots and either wild-type or sitiens roots were established in pots that could be placed inside a pressure chamber, and the pressure increased as the soil dried so that the shoots remained fully turgid throughout. Stomates closed as the soil dried, regardless of whether the roots were wild type or sitiens. These experiments demonstrate that stomatal closure in response to soil drying can occur in the absence of leaf water deficit, and does not require ABA production by roots. A chemical signal from roots leading to a change in apoplastic ABA levels in leaves may be responsible for the stomatal closure.

Accounting for sap flow from different parts of the root system improves the prediction of xylem ABA concentration in plants grown with heterogeneous soil moisture.

PubMed

Dodd, Ian C; Egea, Gregorio; Davies, William J

2008-01-01

When soil moisture is heterogeneous, sap flow from, and ABA status of, different parts of the root system impact on leaf xylem ABA concentration ([X-ABA]leaf). The robustness of a model for predicting [X-ABA]leaf was assessed. 'Two root-one shoot' grafted sunflower (Helianthus annuus L.) plants received either deficit irrigation (DI, each root system received the same irrigation volumes) or partial rootzone drying (PRD, only one root system was watered and the other dried the soil). Irrespective of whether relative sap flow was assessed using sap flow sensors in vivo or by pressurization of de-topped roots, each root system contributed similarly to total sap flow during DI, while sap flow from roots in drying soil declined linearly with soil water potential (Psisoil) during PRD. Although Psisoil of the irrigated pot determined the threshold Psisoil at which sap flow from roots in drying soil decreased, the slope of this decrease was independent of the wet pot Psisoil. Irrespective of whether sap was collected from the wet or dry root system of PRD plants, or a DI plant, root xylem ABA concentration increased as Psisoil declined. The model, which weighted ABA contributions of each root system according to the sap flow from each, almost perfectly explained [X-ABA] immediately above the graft union. That the model overestimated measured [X-ABA]leaf may result from changes in [X-ABA] along the transport pathway or an artefact of collecting xylem sap from detached leaves. The implications of declining sap flow through partially dry roots during PRD for the control of stomatal behaviour and irrigation scheduling are discussed.

Influence of the individual or combined application of biochar and slurry on soil macro-aggregate formation under varying moisture conditions

NASA Astrophysics Data System (ADS)

Kaiser, Michael; Grunwald, Dennis; Koch, Heinz-Josef; Rauber, Rolf; Ludwig, Bernard

2017-04-01

The formation of aggregates is of large importance for the structure and the storage of organic matter (OM) in soil. Although positive effects of organic soil additives on the formation of macro-aggregates (> 250 µm) have been reported, the influence of biochar especially applied in combination with other organic amendments remains unclear. Furthermore, studies on the effect of varying soil moisture conditions in form of drying-rewetting cycles on soil aggregate dynamics in the presence of biochar are almost missing. The objectives of this study were to analyze the effects of biochar and slurry applied to the soil individually or in combination on the formation of macro-aggregates under constant and under varying moisture conditions. We sampled four silty loam soils, carefully crushed the soil macro-aggregates, and incubated the soil at 15 °C for 60 days with the following additions: (i) none (control), (ii) biochar (12 % of dry soil mass), (iii) slurry (150 kg N ha-1), (iv) biochar (6 %) + slurry (75 kg N ha-1), (v) biochar (12 %) + slurry (75 kg N ha-1), (vi) biochar (6 %) + slurry (150 kg N ha-1) and (vii) biochar (12 %) + slurry (150 kg N ha-1). The samples were further subdivided into two groups that were incubated under conditions of constant soil moisture and of three drying-rewetting cycles. The CO2 fluxes were continuously measured during the incubation period and the samples were analyzed for microbial biomass C, macro-aggregate yields and macro-aggregate-associated C after finishing the experiment. We found the application of biochar to result in lower macro-aggregate yields with or without slurry compared to the control or the individual slurry application. In contrast, similar or higher C contents in the macro-aggregate fraction of the biochar treatments as compared to the control or slurry treatments were found indicating an occlusion of biochar in macro-aggregates. Due to the sorption characteristics of biochar, we assume the aggregate formation to be partially abiotic with direct interactions between biochar, (adsorbed) slurry, and the mineral phase of the soil. Therefore, in the presence of slurry, a prolonged period of microbial processing does not seem to be necessary to render the biochar suitable to form aggregates. Drying and rewetting of the samples resulted in significantly lower aggregate yields especially for the biochar/slurry mixtures. The drying of slurry as thought to be the most important macro-aggregate binding agent in these treatments might irreversibly disrupt large amounts of the macro-aggregates formed. Additionally, the general lower microbial biomass C and CO2 emissions for the samples experiencing drying-rewetting cycles compared to the constantly moist soils point toward less microbial activity under varying moisture conditions. This might have led to less microbial derived aggregate binding agents contributing to the lower aggregate yields found for the samples from the drying-rewetting treatments. Beside the amount and type of binding agents derived from organic soil additives, the formation and stability of soil macro-aggregate seem also to be controlled by climatically controlled soil moisture conditions.

Project environmental microbiology as related to planetary quarantine

NASA Technical Reports Server (NTRS)

Pflug, I. J.

1973-01-01

The viability and dry heat resistance of indigenous microflora associated with small soil particles were investigated. An aluminum boat TDT CUP-TSA solid media system was developed for the analyses; a complete description of the technique is included. Data cited here were obtained using analyses of individual soil particles. Detailed particle viability profiles for dry heat effects were determined for Kennedy Space Center soil. At 110 C at least some particles retained viability through a heating period of between 8 and 16 hours. Single particles heated at 125 C for 80 minutes or longer did not show evidence of viability under test conditions. Preliminary aerobic, mesophilic plate counts of the 74-88 micron m soil fraction yielded mean values of 16.2 organisms per dark particle and 2.6 organisms per light particle. Heat treatment of particles in a dry atmosphere did not appear to increase the rate of inactivation for in situ soil particle microflora.

Comparison between fractionation and bioavailability of trace elements in rhizosphere and bulk soils.

PubMed

Wang, Zhongwen; Shan, Xiao-Quan; Zhang, Shuzhen

2002-03-01

Rhizosphere is a microbiosphere and has quite different chemical, physical and biological properties from bulk soils. A greenhouse experiment was performed to compare the difference of fractionation and bioavailability of trace elements Cr, Ni, Zn, Cu, Pb and Cd between rhizosphere soil and bulk soil. In the meantime, the influence of air-drying on the fractionation and bioavailability was also investigated by using wet soil sample as a control. Soils in a homemade rhizobox were divided into four zones: rhizosphere, near rhizosphere, near bulk soil and bulk soil zones, which was designated as S1, S2, S3 and S4. Elemental speciations were fractionated to water soluble, exchangeable and carbonate bound (B1), Fe-Mn oxide bound (B2), and organic and sulfide bound (B3) by a sequential extraction procedure. Speciation differences were observed for elements Cr, Ni, Zn, Cu, Pb and Cd between the rhizosphere and bulk soils, and between the air-dried and wet soils as well. The concentrations of all six heavy metals in fraction B1 followed the order of S2 > S3 > S1 > S4 and for B2, the order was S2 > S3 S4 > S1. For B3, the order was S1 > S3 S4 > S2, while for Cd the order was S2 > S3 approximately/= S4 > S1. The air-drying increased elemental concentration in fractions B1 and B2 by 20-50% and decreased in fraction B3 by about 20-100%. Correlation analysis also indicated that the bioavailability correlation coefficient of fraction B1 in rhizosphere wet soil to plants was better than that between either air-dried or nonrhizosphere soils. Therefore, application of rhizosphere wet soils should be recommended in the future study on the speciation analysis of trace elements in soils and bioavailability.

The Use of a Geographic Information System and Remote Sensing Technology for Monitoring Land Use and Soil Carbon Change in the Subtropical Dry Forest Life Zone of Puerto Rico

NASA Technical Reports Server (NTRS)

Velez-Rodriguez, Linda L. (Principal Investigator)

1996-01-01

Aerial photography, one of the first form of remote sensing technology, has long been an invaluable means to monitor activities and conditions at the Earth's surface. Geographic Information Systems or GIS is the use of computers in showing and manipulating spatial data. This report will present the use of geographic information systems and remote sensing technology for monitoring land use and soil carbon change in the subtropical dry forest life zone of Puerto Rico. This research included the south of Puerto Rico that belongs to the subtropical dry forest life zone. The Guanica Commonwealth Forest Biosphere Reserve and the Jobos Bay National Estuarine Research Reserve are studied in detail, because of their location in the subtropical dry forest life zone. Aerial photography, digital multispectral imagery, soil samples, soil survey maps, field inspections, and differential global positioning system (DGPS) observations were used.

The length of the dry season may be associated with leaf scleromorphism in cerrado plants.

PubMed

Souza, Marcelo C; Franco, Augusto C; Haridasan, Mundayatan; Rossatto, Davi R; de Araújo, Janaína F; Morellato, Leonor P C; Habermann, Gustavo

2015-09-01

Despite limitations of low fertility and high acidity of the soils, the cerrado flora is the richest amongst savannas. Many cerrado woody species show sclerophyllous leaves, which might be related to the availability of water and nutrients in the soil. To better understand the function and structure of cerrado vegetation within its own variations, we compared two cerrado communities: one in its core region in central Brazil (Brasília, DF) and the other on its southern periphery (Itirapina, SP). We contrasted the length of the dry season, soil fertility rates, leaf concentrations of N, P, K, Ca and Mg and the specific leaf area (SLA) between these communities. The dry season was shorter on the periphery, where the soil was more fertile although more acidic. Plants from the periphery showed higher SLA and higher leaf concentrations of N, P, Ca and Mg. We propose that the higher SLA of plants from the periphery is related to the shorter dry season, which allows better conditions for nutrient uptake.

Spatiotemporal variation and statistical characteristic of extreme precipitation in the middle reaches of the Yellow River Basin during 1960-2013

NASA Astrophysics Data System (ADS)

Zhang, Yin; Xia, Jun; She, Dunxian

2018-01-01

In recent decades, extreme precipitation events have been a research hotspot worldwide. Based on 12 extreme precipitation indices, the spatiotemporal variation and statistical characteristic of precipitation extremes in the middle reaches of the Yellow River Basin (MRYRB) during 1960-2013 were investigated. The results showed that the values of most extreme precipitation indices (except consecutive dry days (CDD)) increased from the northwest to the southeast of the MRYRB, reflecting that the southeast was the wettest region in the study area. Temporally, the precipitation extremes presented a drying trend with less frequent precipitation events. Generalized extreme value (GEV) distribution was selected to fit the time series of all indices, and the quantiles values under the 50-year return period showed a similar spatial extent with the corresponding precipitation extreme indices during 1960-2013, indicating a higher risk of extreme precipitation in the southeast of the MRYRB. Furthermore, the changes in probability distribution functions of indices for the period of 1960-1986 and 1987-2013 revealed a drying tendency in our study area. Both El Niño-Southern Oscillation (ENSO) and Pacific Decadal Oscillation (PDO) were proved to have a strong influence on precipitation extremes in the MRYRB. The results of this study are useful to master the change rule of local precipitation extremes, which will help to prevent natural hazards caused.

Orion Landing Simulation Eight Soil Model Comparison

NASA Technical Reports Server (NTRS)

Mark, Stephen D.

2009-01-01

LS-DYNA finite element simulations of a rigid Orion Crew Module (CM) were used to investigate the CM impact behavior on eight different soil models. Ten different landing conditions, characterized by the combination of CM vertical and horizontal velocity, hang angle, and roll angle were simulated on the eight different soils. The CM center of gravity accelerations, pitch angle, kinetic energy, and soil contact forces were the outputs of interest. The simulation results are presented, with comparisons of the CM behavior on the different soils. The soils analyzed in this study can be roughly categorized as soft, medium, or hard, according to the CM accelerations that occur when landing on them. The soft group is comprised of the Carson Sink Wet soil and the Kennedy Space Center (KSC) Low Density Dry Sand. The medium group includes Carson Sink Dry, the KSC High Density In-Situ Moisture Sand and High Density Flooded Sand, and Cuddeback B. The hard soils are Cuddeback A and the Gantry Unwashed Sand. The softer soils were found to produce lower peak accelerations, have more stable pitch behavior, and to be less sensitive to the landing conditions. This investigation found that the Cuddeback A soil produced the highest peak accelerations and worst stability conditions, and that the best landing performance was achieved on the KSC Low Density Dry Sand.

Aspect-dependent soil saturation and insight into debris-flow initiation during extreme rainfall in the Colorado Front Range

USGS Publications Warehouse

Ebel, Brian A.; Rengers, Francis K.; Tucker, Gregory E.

2015-01-01

Hydrologic processes during extreme rainfall events are poorly characterized because of the rarity of measurements. Improved understanding of hydrologic controls on natural hazards is needed because of the potential for substantial risk during extreme precipitation events. We present field measurements of the degree of soil saturation and estimates of available soil-water storage during the September 2013 Colorado extreme rainfall event at burned (wildfire in 2010) and unburned hillslopes with north- and south-facing slope aspects. Soil saturation was more strongly correlated with slope aspect than with recent fire history; south-facing hillslopes became fully saturated while north-facing hillslopes did not. Our results suggest multiple explanations for why aspect-dependent hydrologic controls favor saturation development on south-facing slopes, causing reductions in effective stress and triggering of slope failures during extreme rainfall. Aspect-dependent hydrologic behavior may result from (1) a larger gravel and stone fraction, and hence lower soil-water storage capacity, on south-facing slopes, and (2) lower weathered-bedrock permeability on south-facing slopes, because of lower tree density and associated deep roots penetrating bedrock as well as less intense weathering, inhibiting soil drainage.

An estimation of the main wetting branch of the soil water retention curve based on its main drying branch using the machine learning method

NASA Astrophysics Data System (ADS)

Lamorski, Krzysztof; Šimūnek, Jiří; Sławiński, Cezary; Lamorska, Joanna

2017-02-01

In this paper, we estimated using the machine learning methodology the main wetting branch of the soil water retention curve based on the knowledge of the main drying branch and other, optional, basic soil characteristics (particle size distribution, bulk density, organic matter content, or soil specific surface). The support vector machine algorithm was used for the models' development. The data needed by this algorithm for model training and validation consisted of 104 different undisturbed soil core samples collected from the topsoil layer (A horizon) of different soil profiles in Poland. The main wetting and drying branches of SWRC, as well as other basic soil physical characteristics, were determined for all soil samples. Models relying on different sets of input parameters were developed and validated. The analysis showed that taking into account other input parameters (i.e., particle size distribution, bulk density, organic matter content, or soil specific surface) than information about the drying branch of the SWRC has essentially no impact on the models' estimations. Developed models are validated and compared with well-known models that can be used for the same purpose, such as the Mualem (1977) (M77) and Kool and Parker (1987) (KP87) models. The developed models estimate the main wetting SWRC branch with estimation errors (RMSE = 0.018 m3/m3) that are significantly lower than those for the M77 (RMSE = 0.025 m3/m3) or KP87 (RMSE = 0. 047 m3/m3) models.

Comparative toxicity of imidacloprid and thiacloprid to different species of soil invertebrates.

PubMed

de Lima E Silva, Cláudia; Brennan, Nicola; Brouwer, Jitske M; Commandeur, Daniël; Verweij, Rudo A; van Gestel, Cornelis A M

2017-05-01

Neonicotinoid insecticides have come under increasing scrutiny for their impact on non-target organisms, especially pollinators. The current scientific literature is mainly focused on the impact of these insecticides on pollinators and some aquatic insects, leaving a knowledge gap concerning soil invertebrates. This study aimed at filling this gap, by determining the toxicity of imidacloprid and thiacloprid to five species of soil invertebrates: earthworms (Eisenia andrei), enchytraeids (Enchytraeus crypticus), Collembola (Folsomia candida), oribatid mites (Oppia nitens) and isopods (Porcellio scaber). Tests focused on survival and reproduction or growth, after 3-5 weeks exposure in natural LUFA 2.2 standard soil. Imidacloprid was more toxic than thiacloprid for all species tested. F. candida and E. andrei were the most sensitive species, with LC 50 s of 0.20-0.62 and 0.77 mg/kg dry soil for imidacloprid and 2.7-3.9 and 7.1 mg/kg dry soil for thiacloprid. EC 50 s for effects on the reproduction of F. candida and E. andrei were 0.097-0.30 and 0.39 mg/kg dry soil for imidacloprid and 1.7-2.4 and 0.44 mg/kg dry soil for thiacloprid. The least sensitive species were O. nitens and P. scaber. Enchytraeids were a factor of 5-40 less sensitive than the taxonomically related earthworm, depending on the endpoint considered. Although not all the species showed high sensitivity to the neonicotinoids tested, these results raise awareness about the effects these insecticides can have on non-target soil invertebrates.

Climate Change on Mars: From Wet in the Noachian at Meridiani to Dry and Desiccating in the Hesperian/Amazonian Plains of Gusev

NASA Astrophysics Data System (ADS)

Golombek, M.

2004-12-01

Sedimentary dirty evaporites in Meridiani Planum were deposited in salt-water playas or sabkhas in the Noachian, roughly coeval with a variety of geomorphic indicators (valley networks, degraded craters and highly eroded terrain) of a possible early warmer and wetter environment. In contrast, the cratered plains of Gusev that Spirit has traversed (exclusive of the Columbia Hills) have been dominated by impact and eolian processes and a gradation history that argues for a dry and desiccating environment since the Late Hesperian. The Late Hesperian/Early Amazonian cratered plains of Gusev crater are generally low relief moderately rocky plains dominated by hollows, which appear to be craters filled with soil. Rocks are generally angular basalt fragments in an unconsolidated >10 m thick regolith of likely impact origin. Eolian bedforms appear to be presently inactive ripples and no active sand dunes have been identified. Moderate localized surface deflation of 5 to 60 cm is indicated by two-toned rocks with a redder patination along the base, ventifacts that originate from a common horizon above the soil (suggesting that the lower part of the rock was shielded), rocks that appear to be perched on top of other rocks, and some undercut rocks, in which the soil has been removed from their bases. The observed gradation and deflation of ejected fines and deposition in craters to form hollows thus provides a measure of the rate of erosion (average vertical removal of material per unit time), which yields extremely slow erosion rates of order 0.1 nm/yr comparable to those estimated at the Mars Pathfinder ( ˜0.01 nm/yr) and Viking Lander 1 ( ˜1 nm/yr) sites and argues that a dry and desiccating environment similar to today's has been active throughout the Hesperian and Amazonian (since ˜3.7 Ga). By comparison, erosion rates estimated from changes in Noachian age crater distributions and shapes are 3-5 orders of magnitude higher and comparable to slow denudation rates on the Earth (>5 micron/yr) that are dominated by liquid water. The erosion rates from Gusev as well as those from Viking 1 and Pathfinder strongly limit this warmer and wetter period (possibly recorded in the Meridiani evaporites) to the Noachian, pre-3.7 Ga and a dry and desiccating climate since.

The 2016 southeastern US drought: an extreme departure from centennial wetting and cooling

NASA Astrophysics Data System (ADS)

Williams, P.; Cook, B. I.; Smerdon, J. E.; Bishop, D. A.; Seager, R.; Mankin, J. S.

2017-12-01

The southeastern United States (SE US) drought in fall 2016 appeared exceptional based on its wildfire and water-supply impacts but the current monitoring framework does not readily facilitate evaluation of moisture-balance anomalies in a centennial context. A new method to extend modeled soil-moisture records back to 1895 is developed using monthly climate data. Since 1895, October-November 2016 soil moisture (0-200 cm) in the SE US was likely the second lowest on record, behind 1954. This severe drought developed rapidly and was brought on by near record-low September-November precipitation and record-high September-November daily maximum temperatures (Tmax). Record Tmax drove record-high atmospheric moisture demand, accounting for 28% of the October-November 2016 soil-moisture anomaly. Drought and heat in fall 2016 contrasted strongly with 20th-century wetting and cooling trends, with few analogs after the mid-1950s. Dynamically, the exceptional drying in fall 2016 was driven by anomalous ridging over the central United States that reduced south-southwesterly moisture transports into the SE US by approximately 75%. These circulation anomalies were promoted by moderate La Niña conditions and warmth in the tropical North Atlantic, but these processes did not account for a majority of the SE US drying in fall 2016 and therefore imply a large role for internal atmospheric variability. The extended analysis back to 1895 indicates that SE US droughts as strong as the 2016 event are more likely than indicated from a shorter 60-year perspective, and continued multi-decadal swings in precipitation may combine with future warming to further enhance the likelihood of such events.

The Effects of More Extreme Rainfall Patterns on Infiltration and Nutrient Losses in Agricultural Soils

NASA Astrophysics Data System (ADS)

Hess, L.; Basso, B.; Hinckley, E. L. S.; Robertson, G. P.; Matson, P. A.

2015-12-01

In the coming century, the proportion of total rainfall that falls in heavy storm events is expected to increase in many areas, especially in the US Midwest, a major agricultural region. These changes in rainfall patterns may have consequences for hydrologic flow and nutrient losses, especially in agricultural soils, with potentially negative consequences for receiving ground- and surface waters. We used a tracer experiment to examine how more extreme rainfall patterns may affect the movement of water and solutes through an agricultural soil profile in the upper Midwest, and to what extent tillage may moderate these effects. Two rainfall patterns were created with 5m x 5m rainout shelters at the Kellogg Biological Station LTER site in replicated plots with either conventional tillage or no-till management. Control rainfall treatments received water 3x per week, and extreme rainfall treatments received the same total amount of water but once every two weeks, to simulate less frequent but larger storms. In April 2015, potassium bromide (KBr) was added as a conservative tracer of water flow to all plots, and Br- concentrations in soil water at 1.2m depth were measured weekly from April through July. Soil water Br- concentrations increased and peaked more quickly under the extreme rainfall treatment, suggesting increased infiltration and solute transfer to depth compared to soils exposed to control rainfall patterns. Soil water Br- also increased and peaked more quickly in no-till than in conventional tillage treatments, indicating differences in flow paths between management systems. Soil moisture measured every 15 minutes at 10, 40, and 100cm depths corroborates tracer experiment results: rainfall events simulated in extreme rainfall treatments led to large increases in deep soil moisture, while the smaller rainfall events simulated under control conditions did not. Deep soil moisture in no-till treatments also increased sooner after water application as compared to in conventional soils. Our results suggest that exposure to more extreme rainfall patterns will likely increase infiltration depth and nutrient losses in agricultural soils. In particular, soils under no-till management, which leads to development of preferential flow paths, may be particularly vulnerable to vertical nutrient losses.

Microbially-mediated carbon fluxes vary with landscape position in two erodible, intensively managed agricultural landscapes

NASA Astrophysics Data System (ADS)

Fine, A.; Wilson, C. G.; Papanicolaou, T.; Schaeffer, S. M.

2017-12-01

The balance between loss of C to the atmosphere, and the accumulation of soil organic matter is directly controlled by soil microorganisms. A key driver of microbial activity is soil moisture, but it is unclear how microbial C cycling responds to spatiotemporal shifts in hydrological conditions across a heterogeneous, dynamic landscape. We explored the relationship between soil wetness and biogeochemical cycling along landscape positions in two sloping fields of the Intensively Managed Landscape Critical Zone Observatory (IML-CZO) in Iowa, USA. Soils were collected (0-5 cm, 5-10 cm) from four positions (crest, shoulder, backslope, toeslope) along three transects identified as primary flow paths for runoff and sediment. Samples were incubated for 7 days and analyzed pre- and post-incubation for extractable dissolved organic C (DOC), microbial biomass C (MBC), microbial respiration (C-resp), and inorganic N. At both sites, field moisture, MBC, and CUE 0-5 cm increased from summit to toeslope, whereas CUE 5-10 cm decreased. The steeper and drier of the two fields (field 1) showed corresponding increases in C-resp and NO3, but decreases in DOC, moving downslope; the opposite trends were observed in the less erodible, wetter field 2. Comparing the two toeslopes (0-5 cm), field 2 had a larger labile C (DOC + MBC) pool (3.1 mg C g-1 dry soil) than field 1 (2.7 mg g-1 dry soil), but C-resp of field 1 was lower (53 and 42 ug g-1 dry soil for fields 1 and 2, respectively). No differences in MBC between depths were observed in field 1, but in field 2, MBC 5-10 cm (0.6 and 0.7 mg g-1 dry soil at crest and toeslope, respectively) was always less than MBC 0-5 cm (0.9 mg g-1 dry soil). Our findings indicate that wet, poorly drained soil conditions (such as those in lower landscape positions and at depth) decrease microbial activity and allow DOC to accumulate. Despite the relatively enhanced depositional environment of field 1, the low levels of DOC and high C-resp and MBC indicate more suitable conditions for aerobic respiration.

Estimating Rangeland Forage Production Using Remote Sensing Data from a Small Unmanned Aerial System (sUAS)

NASA Astrophysics Data System (ADS)

Liu, H.; Jin, Y.; Devine, S.; Dahlgren, R. A.; Covello, S.; Larsen, R.; O'Geen, A. T.

2017-12-01

California rangelands cover 23 million hectares and support a $3.4 billion annual cattle industry. Rangeland forage production varies appreciably from year-to-year and across short distances on the landscape. Spatially explicit and near real-time information on forage production at a high resolution is critical for effective rangeland management, especially during an era of climatic extremes. We here integrated a multispectral MicaSense RedEdge camera with a 3DR solo quad-copter and acquired time-series images during the 2017 growing season over a topographically complex 10-hectare rangeland in San Luis Obispo County, CA. Soil moisture and temperature sensors were installed at 16 landscape positions, and vegetation clippings were collected at 36 plots to quantify forage dry biomass. We built four centimeter-level models for forage production mapping using time series of sUAS images and ground measurements of forage biomass and soil temperature and moisture. The biophysical model based on Monteith's eco-physiological plant growth theory estimated forage production reasonably well with a coefficient of determination (R2) of 0.86 and a root-mean-square error (RMSE) of 424 kg/ha when the soil parameters were included, and a R2 of 0.79 and a RMSE of 510 kg/ha when only remote sensing and topographical variables were included. We built two empirical models of forage production using a stepwise variable selection technique, one with soil variables. Results showed that cumulative absorbed photosynthetically active radiation (APAR) and elevation were the most important variables in both models, explaining more than 40% of the spatio-temporal variance in forage production. Soil moisture accounted for an additional 29% of the variance. Illumination condition was selected as a proxy for soil moisture in the model without soil variables, and accounted for 18% of the variance. We applied the remote sensing-based models to map daily forage production at 30-cm resolution for the whole study area during the 2017 growing season. The forage maps captured similar seasonal and spatial patterns of forage production as ground measured dry biomass. This study demonstrated a near real-time monitoring tool for ranchers to estimate forage production with sUAS technology and improved watershed-scale rangeland management.

Ongoing change of site conditions important for sustainable forest management planning

NASA Astrophysics Data System (ADS)

Bidló, András; Horváth, Adrienn; Gulyás, Krisztina; Gálos, Borbála

2016-04-01

Observed tree mortality of the last decades has shown that the vulnerable forest ecosystems are especially affected by the recurrent, long lasting droughts, heat waves and their consequences. From all site conditions climate is changing the fastest, in this way it can be the largest threatening factor in the 21st century. Beyond climate, soil characteristics are playing an important influencing role. Until now, silvicultural technologies and species preferences of many countries are prescribed by binding regulation based on climate conditions that are assumed to be constant over time. Therefore the aim of our research was to investigate the ongoing and projected change of site conditions that are considered to be of primary importance in terms of tree species selection. For a case study region in Hungary (Keszthely Mountains, near to Lake Balaton) long-term climate tendencies have been determined for the period 1961-2100, as well as a detailed soil sample analysis has been carried out including ~100 sites. Results show a 0.5 degree increase of temperature and a 6-7 % decrease of the precipitation amount for the summer months in the last decades. For the future, significant warming and drying of summers is expected. Decrease of the summer precipitation sum can exceed 25 % until the end of the century, probability of extreme hot days may increase. These tendencies together with the unfavourable soil conditions and biotic damages can be the reason of the ongoing forest dieback. One of the characteristic soil type of the region is rendzina with a thin topsoil layer and an unfavourable water holding capacity. These properties are limiting the amount of available water for plants, especially in case of intense precipitation events. Black pine stands planted on rendzinas after many years of grazing; therefore erosion may have played a significant role. Not only microclimate conditions but also soil types show a large diversity within a relatively small distance. However, tree mortality has been observed also in stands on favourable soils (rusty brown forest soil, brown earth, lessivated brown forest soil) because these soil sites can only mitigate the damage of extremes. Consequently, there is ongoing change of site conditions that are important for the sustainable forest management planning. Therefore it is an urgent need to rethink regulations considering the changing climate and soil conditions in order to decide about sustainable tree species preference and to maintain forest cover. Keywords: climate change impacts, forest mortality, adaptation, sustainable forest management planning Acknowledgements: Research is supported by the "Agroclimate.2" (VKSZ_12-1-2013-0034) EU-national joint funded research project.

[Spatial distribution of mercury in soils of a typical small agricultural watershed in the Three Gorges Reservoir region].

PubMed

Wang, Ya; Zhao, Zheng; Mu, Zhi-jian; Wang, Dlng-yong; Yu, Ya-wei

2015-01-01

To understand the mercury (Hg) pollution level and the corresponding ecological risk in agricultural watershed of the Three Gorges Reservoir region, a typical watershed, Wangjiagou, located in Fuling, where is in interior zones of the Three Gorges Reservoir region, was selected as the study object. Meanwhile, ArcGIS geo-statistics module was conducted for investigation of the Hg contents and distribution characteristics in soils of different land use types including dry land, farmland, woodland and settlements. Also the corresponding Hg pollution level and ecological risk were assessed. The results suggested that soil Hg contents in this watershed ranged from 9.47 to 94.57 microg x kg(-1), and the mean value was (34.23 +/- 16.23) microg x kg(-1). Higher Hg contents in surfaces of soils were observed in woodland, followed by farmland and settlement. The lowest was found in dry land. Surfaces of soils significantly showed Hg accumulation, and an obvious inverse correlation between soil Hg contents and soil depths was also observed in this study. Additionally, geo-statistics analysis showed a weak spatial correlation of soil Hg contents in this watershed, indicating the spatial distribution of soil Hg in this watershed was mainly influenced by several natural factors such as atmospheric wet-dry deposit, vegetation coverage and topography, instead of anthropogenic interference. Overall confirmative soil Hg pollution was not found in this watershed, which showed a very low pollution index (-0.08), but a moderate potential ecological risk still existed (the ecological risk index was 57), of which woodland had the highest potential risk. The total capacity of Hg in this watershed was 25.39 kg, among which dry land accounted for 69%.

Soil physical properties changed induced by dry-wet cycles in the water-level fluctuation zone of Three Gorges Reservoir region, China

NASA Astrophysics Data System (ADS)

Cui, Junfang; Tang, Xiangyu; Zhang, Wei

2017-04-01

In southwest China, a grand hydraulic engineering called Three Gorges Dam (TGD) was completed and under full power run since 2009, making a total area of 349 km2 along Yangtze River exposing the dry-wet cycles by its impounding of water step by step from the elevations of 135 m in summer season to 175 m in winter season at each year. As populated area, the environmental issues aroused by the TGR have centered on water quality, biodiversity, sedimentation, downstream riverbed erosion and pollutants (both heavy metals and organic pollutants) transportation. All these are regulated or affected by soil structure and pore network, directly or indirectly. Thus, the study of soil physical quality changed induced by these seasonal dry-wet cycles is crucial. The objective of this study is: (1) to describe soil structural status in WLF zone of TGR by combination of laboratory measures and visual evaluation method; (2) to describe the pore system in this zone by both SWRC and CT images; and (3) to address the changes of soil physical quality changed by seasonal dry-wet cycles. Our results showed a deterioration of soil structure (indicated by a high Sq score in VESS) and soil aggregate stability (indicated by low MWD and the mass fractal dimension Dm) in lower land of TGR. The data from both soil water retention curve and micro-CT image demonstrates a going -worse of soil physical quality by decreasing of soil pore number and porosity as well as a shift of drainable micro-pores (0.1 < r < 125 µm) to non-drainable micro-pores (r < 0.1 µm) in the lower land of TGR.

The Impacts of Thawing and Rewetting Cycles on Greenhouse Gas Production in Wetland Soils

NASA Astrophysics Data System (ADS)

Eden, V.; Schade, J. D.

2016-12-01

Climate models predict longer periods of drought followed by intense precipitation, which will have an impact on the expansion and contraction of saturated soils and the extent of anoxic zones near wetlands. Climate models also predict reductions in snowpack which may increase soil freeze thaw cycles. These changes in soil conditions will impact microbial activities. To investigate these processes, we collected soils from saturated, seasonally saturated (SS), and dry areas of a wetland in central Minnesota. We simulated freeze/thaw cycles (FT), dry/rewet (DR), and combination of the two (FTDR) in anoxic incubations of soils from three different positions along a soil moisture gradient for 8-weeks. We also measured soil moisture and organic matter and extracellular enzyme activities of these soils to assess resource use by microbes. Results showed that N2O emissions were high in each area over the first week, suggesting that initially denitrifiers outcompeted methanogens for SOM. The SS soils produced especially high levels of N2O. N-acquiring enzymes involved in the breakdown of plant litter were found to be produced at a lower rate in all treatments of this zone when compared to the others, which indicates that those microbes were less nitrogen limited. CH4 emissions were low during the first two weeks in the control, DR, and FTDR treatments, but significantly higher in the FT treatment, suggesting that this cycle stimulates methanogenesis. This pattern continued in dry soils through the course of the incubation process, which could be the methanogens' reaction to a greater amount of saturation than normal. Enzyme analyses showed that enzymes involved in carbon acquisition were produced at the highest rate in FT treatment in dry soils, suggesting methanogens were carbon limited. Our results suggest that increasing the frequency of FT cycles could lead to higher methane production when wetland soils are saturated, which represents a potential positive feedback on climate change.

Effect of simulated climate warming on the morphological and physiological traits of Elsholtzia haichowensis in copper contaminated soil.

PubMed

Guan, Ming; Jin, Zexin; Li, Junmin; Pan, Xiaocui; Wang, Suizi; Li, Yuelin

2016-01-01

The aim of this study was to investigate the effects of temperature and Cu on the morphological and physiological traits of Elsholtzia haichowensis grown in soils amended with four Cu concentrations (0, 50, 500, and 1000 mg kg(-1)) under ambient temperature and slight warming. At the same Cu concentration, the height, shoot dry weight, total plant dry weight, and root morphological parameters such as length, surface area and tip number of E. haichowensis increased due to the slight warming. The net photosynthetic rate, stomatal conductance, transpiration, light use efficiency were also higher under the slight warming than under ambient temperature. The increased Cu concentrations, total Cu uptake, bioaccumulation factors and tolerance indexes of shoots and roots were also observed at the slight warming. The shoot dry weight, root dry weight, total plant dry weight and the bioaccumulation factors of shoots and roots at 50 mg Cu kg(-1) were significantly higher than those at 500 and 1000 mg Cu kg(-1) under the slight warming. Therefore, the climate warming may improve the ability of E. haichowensis to phytoremediate Cu-contaminated soil, and the ability improvement greatly depended on the Cu concentrations in soils.

Soil Metabolome and Metabolic Fate: Microbial Insights into Freshwater Tidal Wetland Redox Biogeochemistry

NASA Astrophysics Data System (ADS)

Roy Chowdhury, T.; Bramer, L.; Hoyt, D. W.; Kim, Y. M.; Metz, T. O.; McCue, L. A.; Jansson, J.; Bailey, V. L.

2017-12-01

Earth System Models predict climate extremes that will impact regional and global hydrology. Aquatic-terrestrial transition zones like wetlands will experience the immediate consequence of climate change as shifts in the magnitude and dynamics of hydrologic flow. Such fluctuating hydrology can alter the structure and function of the soil microbial populations that in turn will alter the nature and rate of biogeochemical transformations and significantly impact the carbon balance of the ecosystem. We tested the impacts of shifting hydrology on the soil microbiome and the role of antecedent moisture condition on redox active microbial processes in soils sampled from a tidal freshwater wetland system in the lower Columbia River, WA, USA. Our objectives were to characterize changes in the soil microbial community composition in response to soil moisture legacy effects, and to elucidate relationships between community response, geochemical signatures and metabolite profiles in this soil. The 16S rRNA gene sequencing showed significant decreases in bacterial abundance capable of anaerobic metabolism in response to drying, but quickly recovered to the antecedent moisture condition, as observed by redox processes. Metabolomics and biogeochemical process rates generated evidence for moisture-driven redox conditions as principal controls on the community and metabolic function. Fluctuating redox conditions altered terminal electron acceptor and donor availability and recovery strengths of these pools in soil such that a disproportionate release of carbon dioxide stemmed from alternative anaerobic degradation processes like sulfate and iron reduction in compared to methanogenesis. Our results show that anoxic conditions impact microbial communities in both permanently and temporarily saturated conditions and that rapid change in hydrology can increase substrate availability for both aerobic and anaerobic decomposition processes, including methanogenesis.

Soil water content assessment: critical issues concerning the operational application of the triangle method.

PubMed

Maltese, Antonino; Capodici, Fulvio; Ciraolo, Giuseppe; La Loggia, Goffredo

2015-03-19

Knowledge of soil water content plays a key role in water management efforts to improve irrigation efficiency. Among the indirect estimation methods of soil water content via Earth Observation data is the triangle method, used to analyze optical and thermal features because these are primarily controlled by water content within the near-surface evaporation layer and root zone in bare and vegetated soils. Although the soil-vegetation-atmosphere transfer theory describes the ongoing processes, theoretical models reveal limits for operational use. When applying simplified empirical formulations, meteorological forcing could be replaced with alternative variables when the above-canopy temperature is unknown, to mitigate the effects of calibration inaccuracies or to account for the temporal admittance of the soil. However, if applied over a limited area, a characterization of both dry and wet edges could not be properly achieved; thus, a multi-temporal analysis can be exploited to include outer extremes in soil water content. A diachronic empirical approach introduces the need to assume a constancy of other meteorological forcing variables that control thermal features. Airborne images were acquired on a Sicilian vineyard during most of an entire irrigation period (fruit-set to ripening stages, vintage 2008), during which in situ soil water content was measured to set up the triangle method. Within this framework, we tested the triangle method by employing alternative thermal forcing. The results were inaccurate when air temperature at airborne acquisition was employed. Sonic and aerodynamic air temperatures confirmed and partially explained the limits of simultaneous meteorological forcing, and the use of proxy variables improved model accuracy. The analysis indicates that high spatial resolution does not necessarily imply higher accuracies.

Drought consistently alters the composition of soil fungal and bacterial communities in grasslands from two continents.

PubMed

Ochoa-Hueso, Raúl; Collins, Scott L; Delgado-Baquerizo, Manuel; Hamonts, Kelly; Pockman, William T; Sinsabaugh, Robert L; Smith, Melinda D; Knapp, Alan K; Power, Sally A

2018-03-05

The effects of short-term drought on soil microbial communities remain largely unexplored, particularly at large scales and under field conditions. We used seven experimental sites from two continents (North America and Australia) to evaluate the impacts of imposed extreme drought on the abundance, community composition, richness, and function of soil bacterial and fungal communities. The sites encompassed different grassland ecosystems spanning a wide range of climatic and soil properties. Drought significantly altered the community composition of soil bacteria and, to a lesser extent, fungi in grasslands from two continents. The magnitude of the fungal community change was directly proportional to the precipitation gradient. This greater fungal sensitivity to drought at more mesic sites contrasts with the generally observed pattern of greater drought sensitivity of plant communities in more arid grasslands, suggesting that plant and microbial communities may respond differently along precipitation gradients. Actinobateria, and Chloroflexi, bacterial phyla typically dominant in dry environments, increased their relative abundance in response to drought, whereas Glomeromycetes, a fungal class regarded as widely symbiotic, decreased in relative abundance. The response of Chlamydiae and Tenericutes, two phyla of mostly pathogenic species, decreased and increased along the precipitation gradient, respectively. Soil enzyme activity consistently increased under drought, a response that was attributed to drought-induced changes in microbial community structure rather than to changes in abundance and diversity. Our results provide evidence that drought has a widespread effect on the assembly of microbial communities, one of the major drivers of soil function in terrestrial ecosystems. Such responses may have important implications for the provision of key ecosystem services, including nutrient cycling, and may result in the weakening of plant-microbial interactions and a greater incidence of certain soil-borne diseases. © 2018 John Wiley & Sons Ltd.

Carbon flow from volcanic CO2 into soil microbial communities of a wetland mofette

USGS Publications Warehouse

Beulig, Felix; Heuer, Verena B.; Akob, Denise M.; Viehweger, Bernhard; Elvert, Marcus; Herrmann, Martina; Hinrichs, Kai-Uwe; Küsel, Kirsten

2015-01-01

Effects of extremely high carbon dioxide (CO2) concentrations on soil microbial communities and associated processes are largely unknown. We studied a wetland area affected by spots of subcrustal CO2 degassing (mofettes) with focus on anaerobic autotrophic methanogenesis and acetogenesis because the pore gas phase was largely hypoxic. Compared with a reference soil, the mofette was more acidic (ΔpH ~0.8), strongly enriched in organic carbon (up to 10 times), and exhibited lower prokaryotic diversity. It was dominated by methanogens and subdivision 1Acidobacteria, which likely thrived under stable hypoxia and acidic pH. Anoxic incubations revealed enhanced formation of acetate and methane (CH4) from hydrogen (H2) and CO2 consistent with elevated CH4 and acetate levels in the mofette soil. 13CO2 mofette soil incubations showed high label incorporations with ~512 ng13C g (dry weight (dw)) soil−1 d−1 into the bulk soil and up to 10.7 ng 13C g (dw) soil−1 d−1 into almost all analyzed bacterial lipids. Incorporation of CO2-derived carbon into archaeal lipids was much lower and restricted to the first 10 cm of the soil. DNA-SIP analysis revealed that acidophilic methanogens affiliated withMethanoregulaceae and hitherto unknown acetogens appeared to be involved in the chemolithoautotrophic utilization of 13CO2. Subdivision 1 Acidobacteriaceae assimilated 13CO2 likely via anaplerotic reactions because Acidobacteriaceae are not known to harbor enzymatic pathways for autotrophic CO2 assimilation. We conclude that CO2-induced geochemical changes promoted anaerobic and acidophilic organisms and altered carbon turnover in affected soils.

The abundance of functional genes, cbbL, nifH, amoA and apsA, and bacterial community structure of intertidal soil from Arabian Sea.

PubMed

Keshri, Jitendra; Yousuf, Basit; Mishra, Avinash; Jha, Bhavanath

2015-06-01

The Gulf of Cambay is a trumpet-shaped inlet of the Arabian Sea, located along the west coast of India and confronts a high tidal range with strong water currents. The region belongs to a semi-arid zone and saline alkaline intertidal soils are considered biologically extreme. The selected four soil types (S1-S4) were affected by salinity, alkalinity and sodicity. Soil salinity ranged from 20 to 126 dS/m, soil pH 8.6-10.0 with high sodium adsorption ratio (SAR) and exchangeable sodium percentage (ESP). Abundance of the key functional genes like cbbL, nifH, amoA and apsA involved in biogeochemical cycling were targeted using qPCR, which varied from (2.36 ± 0.03) × 10(4) to (2.87 ± 0.26) × 10(8), (1.18 ± 0.28) × 10(6) to (1.01 ± 0.26) × 10(9), (1.41 ± 0.21) × 10(6) to (1.29 ± 0.05) × 10(8) and (8.47 ± 0.23) × 10(4) to (1.73 ± 0.01) × 10(6) per gram dry weight, respectively. The microbial community structure revealed that soils S1 and S3 were dominated by phylum Firmicutes whereas S4 and S2 showed an abundance of Proteobacterial clones. These soils also represented Bacteroidetes, Chloroflexi, Actinobacteria, Planctomycetes and Acidobacteria clones. Molecular phylogeny showed a significant variation in the bacterial community distribution among the intertidal soil types. A high number of novel taxonomic units were observed which makes the intertidal zone a unique reservoir of unidentified bacterial taxa that may be explored further. Copyright © 2015 Elsevier GmbH. All rights reserved.

Soil Water Content Assessment: Critical Issues Concerning the Operational Application of the Triangle Method

PubMed Central

Maltese, Antonino; Capodici, Fulvio; Ciraolo, Giuseppe; La Loggia, Goffredo

2015-01-01

Knowledge of soil water content plays a key role in water management efforts to improve irrigation efficiency. Among the indirect estimation methods of soil water content via Earth Observation data is the triangle method, used to analyze optical and thermal features because these are primarily controlled by water content within the near-surface evaporation layer and root zone in bare and vegetated soils. Although the soil-vegetation-atmosphere transfer theory describes the ongoing processes, theoretical models reveal limits for operational use. When applying simplified empirical formulations, meteorological forcing could be replaced with alternative variables when the above-canopy temperature is unknown, to mitigate the effects of calibration inaccuracies or to account for the temporal admittance of the soil. However, if applied over a limited area, a characterization of both dry and wet edges could not be properly achieved; thus, a multi-temporal analysis can be exploited to include outer extremes in soil water content. A diachronic empirical approach introduces the need to assume a constancy of other meteorological forcing variables that control thermal features. Airborne images were acquired on a Sicilian vineyard during most of an entire irrigation period (fruit-set to ripening stages, vintage 2008), during which in situ soil water content was measured to set up the triangle method. Within this framework, we tested the triangle method by employing alternative thermal forcing. The results were inaccurate when air temperature at airborne acquisition was employed. Sonic and aerodynamic air temperatures confirmed and partially explained the limits of simultaneous meteorological forcing, and the use of proxy variables improved model accuracy. The analysis indicates that high spatial resolution does not necessarily imply higher accuracies. PMID:25808771

Hydropedology of a mildly-arid loess covered area, southern Israel

NASA Astrophysics Data System (ADS)

Yair, Aaron; Goldshleger, Naftali

2016-04-01

Extensive loess covered areas characterize the mildly arid areas of western Israel, where average annual rainfall is 280 mm. Hydrological data available point to a peculiar hydrological behavior of the ephemeral streams. The frequency of channel flow is very high. Four to eight flows are recorded annually. However, even in extreme rain events peak discharges are extremely low representing 0.002-0.005% of the rain amount received by the basin at peak flow. In addition, hydrographs are usually characterized by very steep rising and falling limbs, representative of saturated or nearly saturated areas, extending over a limited part of the watershed. Following this observation we advanced the hypothesis that storm channel runoff originated in the channel itself, with negligible contribution from the adjoining hillslopes. The study was based on two complementary approaches. The hydrological approach was based on the detailed analysis of rainfall-runoff relationships in a small watershed (11 km2). The second approach was based on the toposequence concept. According to this concept soil's properties are closely related to the position of a soil along a slope. Constituents and water lost by the upper part of the slope accumulate in its lower part, which is richer in clay and better leached. Several boreholes were dug along a hillslope 400 m long. Soil samples were collected for chemical and particle size analysis. In addition, samples for soil moisture data were taken following each major rain event. Chemical data obtained show no significant observable difference in the downslope direction. Similar results were also obtained for the particle size distribution and soil moisture content. However, particle size distribution in the active channel reveals very high clay content down to 60 cm. Data obtained lead to two main conclusions. 1. Data presented perfectly fit the concept of "Partial Area Contribution", in its narrow sense, as it presents an extreme case of hydrological discontinuity at the hillslope-channel interface. The high water absorption of the clayey alluvium limits infiltration depth resulting in a very high frequency of channel flow, even at low intensity rain events. The limited wet channel area is responsible for the low peak discharges, and for the steep shapes of most hydrographs. 2. The lack of pedological trends in the downslope direction is an additional indication of the limited connectivity between the hillslopes and the adjoining channel. The limited connectivity is attributed to the prevalence of low rain intensities in the study area. 90-95% of the rains are below 10 mm/hr., whereas final infiltration rates of the loamy-clayey soils are 10-15 mm/hr. higher rain intensities do exist, but there duration is extremely short, drastically limiting flow distances and overland flow contribution to the channel. The present study is also relevant to our understanding of pedological processes in dry-land areas. The high frequency of the intermittent low intensity rainstorms limits runoff generation and flow distances, and casts doubt on the general application of the toposequence approach.

Mapping Live Fuel Moisture and the relation to drought and post fire events for Southern California region

NASA Astrophysics Data System (ADS)

Hatzopoulos, N.; Kim, S. H.; Kafatos, M.; Nghiem, S. V.; Myoung, B.

2016-12-01

Live Fuel Moisture is a dryness measure used by the fire departments to determine how dry is the current situation of the fuels from the forest areas. In order to map Live Fuel Moisture we conducted an analysis with a standardized regressional approach from various vegetation indices derived from remote sensing data of MODIS. After analyzing the results we concluded mapping Live Fuel Moisture using a standardized NDVI product. From the mapped remote sensed product we observed the appearance of extremely high dry fuels to be highly correlated with very dry years based on the overall yearly precipitation. The appearances of the extremely dry mapped fuels tend to have a direct association with fire events and observed to be a post fire indicator. In addition we studied the appearance of extreme dry fuels during critical months when season changes from spring to summer as well as the relation to fire events.

Using dry and wet year hydroclimatic extremes to guide future hydrologic projections

NASA Astrophysics Data System (ADS)

Oni, Stephen; Futter, Martyn; Ledesma, Jose; Teutschbein, Claudia; Buttle, Jim; Laudon, Hjalmar

2016-07-01

There are growing numbers of studies on climate change impacts on forest hydrology, but limited attempts have been made to use current hydroclimatic variabilities to constrain projections of future climatic conditions. Here we used historical wet and dry years as a proxy for expected future extreme conditions in a boreal catchment. We showed that runoff could be underestimated by at least 35 % when dry year parameterizations were used for wet year conditions. Uncertainty analysis showed that behavioural parameter sets from wet and dry years separated mainly on precipitation-related parameters and to a lesser extent on parameters related to landscape processes, while uncertainties inherent in climate models (as opposed to differences in calibration or performance metrics) appeared to drive the overall uncertainty in runoff projections under dry and wet hydroclimatic conditions. Hydrologic model calibration for climate impact studies could be based on years that closely approximate anticipated conditions to better constrain uncertainty in projecting extreme conditions in boreal and temperate regions.

Global Transcriptome Analysis Reveals Acclimation-Primed Processes Involved in the Acquisition of Desiccation Tolerance in Boea hygrometrica.

PubMed

Zhu, Yan; Wang, Bo; Phillips, Jonathan; Zhang, Zhen-Nan; Du, Hong; Xu, Tao; Huang, Lian-Cheng; Zhang, Xiao-Fei; Xu, Guang-Hui; Li, Wen-Long; Wang, Zhi; Wang, Ling; Liu, Yong-Xiu; Deng, Xin

2015-07-01

Boea hygrometrica resurrection plants require a period of acclimation by slow soil-drying in order to survive a subsequent period of rapid desiccation. The molecular basis of this observation was investigated by comparing gene expression profiles under different degrees of water deprivation. Transcripts were clustered according to the expression profiles in plants that were air-dried (rapid desiccation), soil-dried (gradual desiccation), rehydrated (acclimated) and air-dried after acclimation. Although phenotypically indistinguishable, it was shown by principal component analysis that the gene expression profiles in rehydrated, acclimated plants resemble those of desiccated plants more closely than those of hydrated acclimated plants. Enrichment analysis based on gene ontology was performed to deconvolute the processes that accompanied desiccation tolerance. Transcripts associated with autophagy and α-tocopherol accumulation were found to be activated in both air-dried, acclimated plants and soil-dried non-acclimated plants. Furthermore, transcripts associated with biosynthesis of ascorbic acid, cell wall catabolism, chaperone-assisted protein folding, respiration and macromolecule catabolism were activated and maintained during soil-drying and rehydration. Based on these findings, we hypothesize that activation of these processes leads to the establishment of an optimal physiological and cellular state that enables tolerance during rapid air-drying. Our study provides a novel insight into the transcriptional regulation of critical priming responses to enable survival following rapid dehydration in B. hygrometrica. © The Author 2015. Published by Oxford University Press on behalf of Japanese Society of Plant Physiologists. All rights reserved. For permissions, please email: journals.permissions@oup.com.

Revegetation of extremely acid mine soils based on aided phytostabilization: A case study from southern China.

PubMed

Yang, Sheng-Xiang; Liao, Bin; Yang, Zhi-Hui; Chai, Li-Yuan; Li, Jin-Tian

2016-08-15

Acidification is a major constraint for revegetation of sulphidic metal-contaminated soils, as exemplified by the limited literature reporting the successful phytostabilization of mine soils associated with pH<3 and high acidification potential. In this study, a combination of ameliorants (lime and chicken manure) and five acid-tolerant plant species has been employed in order to establish a self-sustaining vegetation cover on an extremely acid (pH<3) polymetallic pyritic mine waste heap in southern China exhibiting high acidification potential. The results from the first two-year data showed that the addition of the amendments and the establishment of a plant cover were effective in preventing soil acidification. Net acid-generating potential of the mine soil decreased steadily, whilst pH and acid neutralization capacity increased over time. All the five acid-tolerant plants colonized successfully in the acidic metal-contaminated soil and developed a good vegetation cover within six months, and subsequent vegetation development enhanced organic matter accumulation and nutrient element status in the mine soil. The two-year remediation program performed on this extremely acid metalliferous soil indicated that aided phytostabilization can be a practical and effective restoration strategy for such extremely acid mine soils. Copyright © 2016. Published by Elsevier B.V.

[Impact of periodical flooding-drying on nitrification and ammonia oxidizers in hydro-fluctuation belt of the Three Gorges Reservoir].

PubMed

Guo, Jia; Jiang, Xianjun; Zhou, Xue; Meng, Yao; Jia, Zhongjun

2016-06-04

This study was aimed to elucidate the effect of periodic flooding-drying to ecological processes of ammonia oxidizers in the hydro-fluctuation belt of the Three Gorges Reservoir. Soil samples were collected at thee altitudes in regions of Wanzhou, Fengdu and Changshou, representing 8, 5 and 0 times floodingdrying management, respectively. Soil physiochemical properties were analyzed and microcosms were constructed to monitor nitrification activity by fertilizing soils with ammonium substrate. Real-time PCR was used to quantify the population size of ammonia-oxidizing archaea (AOA) and bacteria (AOB). DGGE fingerprints and clone libraries were conducted to study the shift of AOA and AOB compositions in nitrifying soils. Among the physiochemical characteristics of the soils, soil organic matter and total phosphates increased along with cycle increasing. After incubation for 13 days, the net nitrification rates of the samples with 8 cycles exceeded those with 5 cycles. The quantities of both AOA and AOB have increased during the incubation. Phylogenetic analysis showed that AOA were placed within the soil group 1.1b and soil group 1.1a, while bacterial ammonia oxidizers were closely related to Nitrosospira and Cluster 0. Periodical flooding-drying increased soil organic matter, enhanced soil nitrification activity and likely played important roles in shaping community structures of soil ammonia oxidizers.

Permafrost Thaw, Soil Moisture and Plant Community Change Alter Organic Matter Decomposition in Alaskan Tundra

NASA Astrophysics Data System (ADS)

Natali, S.; Mauritz, M.; Pegoraro, E.; Schuur, E.

2015-12-01

Climate warming in arctic tundra has been associated with increased plant productivity and a shift in plant community composition, specifically an increase in shrub cover, which can impact soil organic matter through changes in the size and composition of the leaf litter pool. Shifts in litter quantity and quality will in turn interact with changes in the soil environment as the climate continues to warm. We examined the effects of permafrost thaw, soil moisture changes, and plant community composition on leaf litter decomposition in an upland tundra ecosystem in Interior Alaska. We present warming and drying effects on decomposition rates of graminoid-dominated and shrub-dominated leaf litter mixtures over three years (2 cm depth), and annual decomposition of a common cellulose substrate (0-10 cm and 10-20 cm) over five years at a permafrost thaw and soil drying experiment. We expected that warming and drying would increase decomposition, and that decomposition would be greater in the shrub litter than in the graminoid litter mix. Decomposition of Betula nana, the dominant shrub, was 50% greater in the shrub-dominated litter mix compared to the graminoid-dominated litter. Surprisingly, there was no significant difference in total litter mass loss between graminoid and shrub litter mixtures, despite significant differences in decomposition rates of the dominant plant species when decomposed alone and in community mixtures. Drying decreased decomposition of B. nana and of the shrub community litter overall, but after two years there was no detected warming effect on shrub-community decomposition. In contrast to leaf litter decomposition, both warming and drying increased decomposition of the common substrate. Warming caused an almost twofold increase in cellulose decomposition in surface soil (0-10cm), and drying caused a twofold increase in cellulose decomposition from deeper organic layer soils (10-20cm). These results demonstrate the importance of interactions among temperature, moisture and vegetation changes on organic matter decomposition, and the potential for increased plant productivity and vegetation changes to alter the size and composition of the soil organic matter pool.

Extrapolating carbon dynamics of tropical dry forests into future climates: improving simulation models with empirical observations

NASA Astrophysics Data System (ADS)

Medvigy, David; Waring, Bonnie; Vargas, German; Xu, Xiangtao; Smith, Christina; Becknell, Justin; Trierweiler, Annette; Brodribb, Timothy; Powers, Jennifer

2017-04-01

Tropical dry forests occur in areas with warm temperatures and a pronounced dry season with little to no rainfall that lasts 3 to 7 months. The potential area covered by this biome is vast: globally, 47% of all forest occurs in tropical and subtropical latitudes, and of all tropical forests approximately 42% are classified as dry forests. Throughout the last several centuries, the area covered by tropical dry forests has been dramatically reduced through conversion to grazing and croplands, and they are now considered the most threatened tropical biome. However, in many regions, tropical dry forests are now growing back. There is growing concern that this recovery process will be strongly impacted by climate variability and change. Observations show that climate is changing in the seasonal tropics, and climate models forecast that neotropical dry forests will receive significantly less rainfall in the 21st century than in the 20th century. Rates of nitrogen deposition are also changing rapidly in this sector, and the fertility of some soils may still be recovering from past land use. We are engaged in several efforts to understand how water and nutrients limit the productivity of these forests, including manipulative experiments, modeling, and investigation of responses to natural climate variability. In 2015, at a well-characterized site in Guanacaste, Costa Rica, we established a full-factorial fertilization experiment with N and P in diverse mature forest stands. Initial responses highlight stronger ecosystem sensitivity to P addition than to N addition. Intriguingly, pre-experiment numerical simulations with a mechanistic ecosystem model had indicated the reverse. Work is ongoing to use field observations to better represent critical processes in the model, and ultimately to improve the model's sensitivity to nutrients and water. In addition, in 2016, we established a full factorial nutrient addition and drought experiment in plantations. Thus far, soil moisture has been successfully reduced in the drought treatments. Finally, we are investigating the impact of an extreme climatic event, the 2015 drought, on the productivity of this forest. The fingerprint of the drought on tree mortality is very strong. We found that plot-level mortality rates were two to three times higher during the drought than before the drought, and varied from 0 to >50% among species. In contrast to observations at moist tropical forests, tree size had little influence on mortality. In terms of functional groups, mortality rates of evergreen oaks growing on nutrient-poor soils particularly increased during drought. However, elevated mortality rates were not clearly correlated with commonly-measured traits like wood density or specific leaf area. In addition, trees that died during the drought tended to have smaller relative growth rate prior to the drought than trees that survived the drought. Mechanistic models are able to simulate stand-level mortality following the drought, and model-data comparison highlights different tree hydraulic strategies that can mitigate drought effects.

Comparison of different assimilation methodologies of groundwater levels to improve predictions of root zone soil moisture with an integrated terrestrial system model

NASA Astrophysics Data System (ADS)

Zhang, Hongjuan; Kurtz, Wolfgang; Kollet, Stefan; Vereecken, Harry; Franssen, Harrie-Jan Hendricks

2018-01-01

The linkage between root zone soil moisture and groundwater is either neglected or simplified in most land surface models. The fully-coupled subsurface-land surface model TerrSysMP including variably saturated groundwater dynamics is used in this work. We test and compare five data assimilation methodologies for assimilating groundwater level data via the ensemble Kalman filter (EnKF) to improve root zone soil moisture estimation with TerrSysMP. Groundwater level data are assimilated in the form of pressure head or soil moisture (set equal to porosity in the saturated zone) to update state vectors. In the five assimilation methodologies, the state vector contains either (i) pressure head, or (ii) log-transformed pressure head, or (iii) soil moisture, or (iv) pressure head for the saturated zone only, or (v) a combination of pressure head and soil moisture, pressure head for the saturated zone and soil moisture for the unsaturated zone. These methodologies are evaluated in synthetic experiments which are performed for different climate conditions, soil types and plant functional types to simulate various root zone soil moisture distributions and groundwater levels. The results demonstrate that EnKF cannot properly handle strongly skewed pressure distributions which are caused by extreme negative pressure heads in the unsaturated zone during dry periods. This problem can only be alleviated by methodology (iii), (iv) and (v). The last approach gives the best results and avoids unphysical updates related to strongly skewed pressure heads in the unsaturated zone. If groundwater level data are assimilated by methodology (iii), EnKF fails to update the state vector containing the soil moisture values if for (almost) all the realizations the observation does not bring significant new information. Synthetic experiments for the joint assimilation of groundwater levels and surface soil moisture support methodology (v) and show great potential for improving the representation of root zone soil moisture.

Fate of Uranium in Wetlands: Impact of Drought Followed by Re-flooding

NASA Astrophysics Data System (ADS)

Gilson, E.; Huang, S.; Koster van Groos, P. G.; Scheckel, K.; Peacock, A. D.; Kaplan, D. I.; Jaffe, P. R.

2014-12-01

Uranium contamination in groundwater can be mitigated in anoxic zones by iron-reducing bacteria that reduce soluble U(VI) to insoluble U(IV) and by uranium immobilization through complexation and sorption. Wetlands often link ground and surface-waters, making them strategic systems for potentially limiting migration of uranium contamination. Little is known about how drought periods that result in the drying of wetland soils, and consequent redox changes, affect uranium fate and transport in wetlands. In order to better understand the fate and stability of immobilized uranium in wetland soils, and how dry periods affect the uranium stability, we dosed saturated wetland mesocosms planted with Scirpus acutus with low levels of uranyl-acetate for 5 months before imposing a 9-day drying period followed by a 13-day rewetting period. Concentrations of uranium in mesocosm effluent increased after rewetting, but the cumulative amount of uranium released in the 13 days following the drying constituted less than 1% of the uranium immobilized in the soil during the 5 months prior to the drought. This low level of remobilization suggests that the uranium immobilized in these soils was not primarily bioreduced U(IV), which could have been oxidized to soluble U(VI) during the drought and released in the effluent during the subsequent flood. XANES analyses confirm that most of the uranium immobilized in the mesocosms was U(VI) sorbed to iron oxides. Compared to mesocosms that did not experience drying or rewetting, mesocosms that were sacrificed immediately after drying and after 13 days of rewetting had less uranium in soil near roots and more uranium on root surfaces. Metal-reducing bacteria only dominated the bacterial community after 13 days of rewetting and not immediately after drying, indicating that these bacteria are not responsible for this redistribution of uranium after the drying and rewetting. Results show that short periods of drought conditions in a wetland may impact uranium distribution, but these conditions may not cause large losses of immobilized uranium from the wetland.

Effect of moisture content and dry unit weight on the resilient modulus of subgrade soils predicted by cone penetration test.

DOT National Transportation Integrated Search

2002-06-01

The objective of this study was to investigate the effect of moisture content and dry unit weight on the resilient characteristics of subgrade soil predicted by the cone penetration test. An experimental program was conducted in which cone penetratio...

Disruption rates for one vulnerable soil in Organ Pipe Cactus National Monument, Arizona, USA

USGS Publications Warehouse

Webb, Robert H.; Esque, Todd C.; Nussear, Kenneth E.; Sturm, Mark

2013-01-01

Rates of soil disruption from hikers and vehicle traffic are poorly known, particularly for arid landscapes. We conducted an experiment in Organ Pipe Cactus National Monument (ORPI) in western Arizona, USA, on an air-dry very fine sandy loam that is considered to be vulnerable to disruption. We created variable-pass tracks using hikers, an all-terrain vehicle (ATV), and a four-wheel drive vehicle (4WD) and measured changes in cross-track topography, penetration depth, and bulk density. Hikers (one pass = 5 hikers) increased bulk density and altered penetration depth but caused minimal surface disruption up to 100 passes; a minimum of 10 passes were required to overcome surface strength of this dry soil. Both ATV and 4WD traffic significantly disrupted the soil with one pass, creating deep ruts with increasing passes that rendered the 4WD trail impassable after 20 passes. Despite considerable soil loosening (dilation), bulk density increased in the vehicle trails, and lateral displacement created berms of loosened soil. This soil type, when dry, can sustain up to 10 passes of hikers but only one vehicle pass before significant soil disruption occurs; greater disruption is expected when soils are wet. Bulk density increased logarithmically with applied pressure from hikers, ATV, and 4WD.

Mechanical impedance of soil crusts and water content in loamy soils

NASA Astrophysics Data System (ADS)

Josa March, Ramon; Verdú, Antoni M. C.; Mas, Maria Teresa

2013-04-01

Soil crust development affects soil water dynamics and soil aeration. Soil crusts act as mechanical barriers to fluid flow and, as their mechanical impedance increases with drying, they also become obstacles to seedling emergence. As a consequence, the emergence of seedling cohorts (sensitive seeds) might be reduced. However, this may be of interest to be used as an effective system of weed control. Soil crusting is determined by several factors: soil texture, rain intensity, sedimentation processes, etc. There are different ways to characterize the crusts. One of them is to measure their mechanical impedance (MI), which is linked to their moisture level. In this study, we measured the evolution of the mechanical impedance of crusts formed by three loamy soil types (clay loam, loam and sandy clay loam, USDA) with different soil water contents. The aim of this communication was to establish a mathematical relationship between the crust water content and its MI. A saturated soil paste was prepared and placed in PVC cylinders (50 mm diameter and 10 mm height) arranged on a plastic tray. Previously the plastic tray was sprayed with a hydrophobic liquid to prevent the adherence of samples. The samples on the plastic tray were left to air-dry under laboratory conditions until their IM was measured. To measure IM, a food texture analyzer was used. The equipment incorporates a mobile arm, a load cell to apply force and a probe. The arm moves down vertically at a constant rate and the cylindrical steel probe (4 mm diameter) penetrates the soil sample vertically at a constant rate. The equipment is provided with software to store data (time, vertical distance and force values) at a rate of up to 500 points per second. Water content in crust soil samples was determined as the loss of weight after oven-drying (105°C). From the results, an exponential regression between MI and the water content was obtained (determination coefficient very close to 1). This methodology allows the prediction of the potential mechanical behaviour of soil crusts generated during soil drying, from initial saturated soil conditions (e.g. waterlogging conditions).

Rhizosphere biophysics and root water uptake

NASA Astrophysics Data System (ADS)

Carminati, Andrea; Zarebanadkouki, Mohsen; Ahmed, Mutez A.; Passioura, John

2016-04-01

The flow of water into the roots and the (putative) presence of a large resistance at the root-soil interface have attracted the attention of plant and soil scientists for decades. Such resistance has been attributed to a partial contact between roots and soil, large gradients in soil matric potential around the roots, or accumulation of solutes at the root surface creating a negative osmotic potential. Our hypothesis is that roots are capable of altering the biophysical properties of the soil around the roots, the rhizosphere, facilitating root water uptake in dry soils. In particular, we expect that root hairs and mucilage optimally connect the roots to the soil maintaining the hydraulic continuity across the rhizosphere. Using a pressure chamber apparatus we measured the relation between transpiration rate and the water potential difference between soil and leaf xylem during drying cycles in barley mutants with and without root hairs. The samples were grown in well structured soils. At low soil moistures and high transpiration rates, large drops in water potential developed around the roots. These drops in water potential recovered very slowly, even after transpiration was severely decreased. The drops in water potential were much bigger in barley mutants without root hairs. These mutants failed to sustain high transpiration rates in dry conditions. To explain the nature of such drops in water potential across the rhizosphere we performed high resolution neutron tomography of the rhizosphere of the barleys with and without root hairs growing in the same soil described above. The tomograms suggested that the hydraulic contact between the soil structures was the highest resistance for the water flow in dry conditions. The tomograms also indicate that root hairs and mucilage improved the hydraulic contact between roots and soil structures. At high transpiration rates and low water contents, roots extracted water from the rhizosphere, while the bulk soil, due its low unsaturated conductivity, failed to compensate root water uptake. We conclude that root hairs are functional to increase the contact area between the roots and the soil structures and mucilage maintains wet the soil region between root hairs. These observations demonstrate the importance of the biophysical processes in the rhizosphere in modulating root water uptake.

Assessing NIR & MIR Spectral Analysis as a Method for Soil C Estimation Across a Network of Sampling Sites

NASA Astrophysics Data System (ADS)

Spencer, S.; Ogle, S.; Borch, T.; Rock, B.

2008-12-01

Monitoring soil C stocks is critical to assess the impact of future climate and land use change on carbon sinks and sources in agricultural lands. A benchmark network for soil carbon monitoring of stock changes is being designed for US agricultural lands with 3000-5000 sites anticipated and re-sampling on a 5- to10-year basis. Approximately 1000 sites would be sampled per year producing around 15,000 soil samples to be processed for total, organic, and inorganic carbon, as well as bulk density and nitrogen. Laboratory processing of soil samples is cost and time intensive, therefore we are testing the efficacy of using near-infrared (NIR) and mid-infrared (MIR) spectral methods for estimating soil carbon. As part of an initial implementation of national soil carbon monitoring, we collected over 1800 soil samples from 45 cropland sites in the mid-continental region of the U.S. Samples were processed using standard laboratory methods to determine the variables above. Carbon and nitrogen were determined by dry combustion and inorganic carbon was estimated with an acid-pressure test. 600 samples are being scanned using a bench- top NIR reflectance spectrometer (30 g of 2 mm oven-dried soil and 30 g of 8 mm air-dried soil) and 500 samples using a MIR Fourier-Transform Infrared Spectrometer (FTIR) with a DRIFT reflectance accessory (0.2 g oven-dried ground soil). Lab-measured carbon will be compared to spectrally-estimated carbon contents using Partial Least Squares (PLS) multivariate statistical approach. PLS attempts to develop a soil C predictive model that can then be used to estimate C in soil samples not lab-processed. The spectral analysis of soil samples either whole or partially processed can potentially save both funding resources and time to process samples. This is particularly relevant for the implementation of a national monitoring network for soil carbon. This poster will discuss our methods, initial results and potential for using NIR and MIR spectral approaches to either replace or augment traditional lab-based carbon analyses of soils.

Global observation-based diagnosis of soil moisture control on land surface flux partition

NASA Astrophysics Data System (ADS)

Gallego-Elvira, Belen; Taylor, Christopher M.; Harris, Phil P.; Ghent, Darren; Veal, Karen L.; Folwell, Sonja S.

2016-04-01

Soil moisture plays a central role in the partition of available energy at the land surface between sensible and latent heat flux to the atmosphere. As soils dry out, evapotranspiration becomes water-limited ("stressed"), and both land surface temperature (LST) and sensible heat flux rise as a result. This change in surface behaviour during dry spells directly affects critical processes in both the land and the atmosphere. Soil water deficits are often a precursor in heat waves, and they control where feedbacks on precipitation become significant. State-of-the-art global climate model (GCM) simulations for the Coupled Model Intercomparison Project Phase 5 (CMIP5) disagree on where and how strongly the surface energy budget is limited by soil moisture. Evaluation of GCM simulations at global scale is still a major challenge owing to the scarcity and uncertainty of observational datasets of land surface fluxes and soil moisture at the appropriate scale. Earth observation offers the potential to test how well GCM land schemes simulate hydrological controls on surface fluxes. In particular, satellite observations of LST provide indirect information about the surface energy partition at 1km resolution globally. Here, we present a potentially powerful methodology to evaluate soil moisture stress on surface fluxes within GCMs. Our diagnostic, Relative Warming Rate (RWR), is a measure of how rapidly the land warms relative to the overlying atmosphere during dry spells lasting at least 10 days. Under clear skies, this is a proxy for the change in sensible heat flux as soil dries out. We derived RWR from MODIS Terra and Aqua LST observations, meteorological re-analyses and satellite rainfall datasets. Globally we found that on average, the land warmed up during dry spells for 97% of the observed surface between 60S and 60N. For 73% of the area, the land warmed faster than the atmosphere (positive RWR), indicating water stressed conditions and increases in sensible heat flux. Higher RWRs were observed for shorter vegetation and bare soil compared to tall, deep-rooted vegetation due to differences in both aerodynamic and hydrological properties. The variation of RWR with antecedent rainfall provides information on which evaporation regime a particular region lies in climatologically. Different drying stages for a given antecedent rainfall can thus be observed depending on land cover type. For instance, our results suggest that forests in a continental climate remain unstressed during a 10 day dry spell provided the previous month saw at least 95 mm of rain. Conversely, RWR values indicate that under similar conditions regions of grass/crop cover are water-stressed.

Historical influence of irrigation on climate extremes

NASA Astrophysics Data System (ADS)

Thiery, Wim; Davin, Edouard L.; Lawrence, Dave; Hauser, Mathias; Seneviratne, Sonia I.

2016-04-01

Land irrigation is an essential practice sustaining global food production and many regional economies. During the last decades, irrigation amounts have been growing rapidly. Emerging scientific evidence indicates that land irrigation substantially affects mean climate conditions in different regions of the world. However, a thorough understanding of the impact of irrigation on extreme climatic conditions, such as heat waves, droughts or intense precipitation, is currently still lacking. In this context, we aim to assess the historical influence of irrigation on the occurrence of climate extremes. To this end, two simulations are conducted over the period 1910-2010 with a state-of-the-art global climate model (the Community Earth System Model, CESM): a control simulation including all major anthropogenic and natural external forcings except for irrigation and a second experiment with transient irrigation enabled. The two simulations are evaluated for their ability to represent (i) hot, dry and wet extremes using the HadEX2 and ERA-Interim datasets as a reference, and (ii) latent heat fluxes using LandFlux-EVAL. Assuming a linear combination of climatic responses to different forcings, the difference between both experiments approximates the influence of irrigation. We will analyse the impact of irrigation on a number of climate indices reflecting the intensity and duration of heat waves. Thereby, particular attention is given to the role of soil moisture changes in modulating climate extremes. Furthermore, the contribution of individual biogeophysical processes to the total impact of irrigation on hot extremes is quantified by application of a surface energy balance decomposition technique to the 90th and 99th percentile surface temperature changes.

Contribution of glomalin to dissolve organic carbon under different land uses and seasonality in dry tropics.

PubMed

Singh, Ashutosh Kumar; Rai, Apurva; Pandey, Vivek; Singh, Nandita

2017-05-01

Glomalin related soil protein (GRSP) is a hydrophobic glycoprotein that is significant for soil organic carbon (SOC) persistence and sequestration, owing to its large contribution to SOC pool and long turnover time. However, the contribution of GRSP to dissolve OC (DOC) leach from soil is not yet comprehensively explored, though it could have implication in understanding SOC dynamics. We, therefore, aim to measure the contribution of GRSP to DOC, in a range of land uses and climatic seasons in the dry tropical ecosystem. Our results demonstrated that a significant proportion of GRSP (water soluble GRSP; WS-GRSP) leached with DOC (7.9-21.9 mg kg -1 ), which accounts for 0.2-0.23% of soils total GRSP (T-GRSP). Forest exhibited significantly higher WS-GRSP and DOC leaching than fallow and agriculture. WS-GRSP and DOC accumulations were higher in the dry season (summer and winter) than in rainy. The extent of seasonal variations was higher in forest than in other two land uses, indicating the role of vegetation and biological activity in soil dissolve organic matter (DOM) dynamics. The regression analysis among WS-GRSP, T-GRSP, DOC and SOC prove that the accumulations and leaching of GRSP and other soil OM (SOM) depend on similar factors. The ratio of WS-GRSP-C to DOC was higher in agriculture soil than in forest and fallow, likely a consequence of altered soil chemistry, and organic matter quantity and quality due to soil management practices. Multivariate analysis reflects a strong linkage among GRSP and SOC storage and leaching, soil nutrients (nitrogen and phosphorus) and other important soil properties (pH and bulk density), suggesting that improving GRSP and other SOM status is an urgent need for the both SOC sequestration and soil health in dry tropical agro-ecosystems. Copyright © 2017 Elsevier Ltd. All rights reserved.

Dry/Wet Cycles Change the Activity and Population Dynamics of Methanotrophs in Rice Field Soil

PubMed Central

Ma, Ke; Conrad, Ralf

2013-01-01

The methanotrophs in rice field soil are crucial in regulating the emission of methane. Drainage substantially reduces methane emission from rice fields. However, it is poorly understood how drainage affects microbial methane oxidation. Therefore, we analyzed the dynamics of methane oxidation rates, composition (using terminal restriction fragment length polymorphism [T-RFLP]), and abundance (using quantitative PCR [qPCR]) of methanotroph pmoA genes (encoding a subunit of particulate methane monooxygenase) and their transcripts over the season and in response to alternate dry/wet cycles in planted paddy field microcosms. In situ methane oxidation accounted for less than 15% of total methane production but was enhanced by intermittent drainage. The dry/wet alternations resulted in distinct effects on the methanotrophic communities in different soil compartments (bulk soil, rhizosphere soil, surface soil). The methanotrophic communities of the different soil compartments also showed distinct seasonal dynamics. In bulk soil, potential methanotrophic activity and transcription of pmoA were relatively low but were significantly stimulated by drainage. In contrast, however, in the rhizosphere and surface soils, potential methanotrophic activity and pmoA transcription were relatively high but decreased after drainage events and resumed after reflooding. While type II methanotrophs dominated the communities in the bulk soil and rhizosphere soil compartments (and to a lesser extent also in the surface soil), it was the pmoA of type I methanotrophs that was mainly transcribed under flooded conditions. Drainage affected the composition of the methanotrophic community only minimally but strongly affected metabolically active methanotrophs. Our study revealed dramatic dynamics in the abundance, composition, and activity of the various type I and type II methanotrophs on both a seasonal and a spatial scale and showed strong effects of dry/wet alternation cycles, which enhanced the attenuation of methane flux into the atmosphere. PMID:23770899

Temperature and moisture conditions for life in the extreme arid region of the Atacama desert: four years of observations including the El Nino of 1997-1998

NASA Technical Reports Server (NTRS)

McKay, Christopher P.; Friedmann, E. Imre; Gomez-Silva, Benito; Caceres-Villanueva, Luis; Andersen, Dale T.; Landheim, Ragnhild

2003-01-01

The Atacama along the Pacific Coast of Chile and Peru is one of the driest and possibly oldest deserts in the world. It represents an extreme habitat for life on Earth and is an analog for life in dry conditions on Mars. We report on four years (September 1994-October 1998) of climate and moisture data from the extreme arid region of the Atacama. Our data are focused on understanding moisture sources and their role in creating suitable environments for photosynthetic microorganisms in the desert surface. The average air temperature was 16.5 degrees C and 16.6 degrees C in 1995 and 1996, respectively. The maximum air temperature recorded was 37.9 degrees C, and the minimum was -5.7 degrees C. Annual average sunlight was 336 and 335 W m(-2) in 1995 and 1996, respectively. Winds averaged a few meters per second, with strong fohn winds coming from the west exceeding 12 m s(-1). During our 4 years of observation there was only one significant rain event of 2.3 mm, which occurred near midnight local time. We suggest that this event was a rainout of a heavy fog. It is of interest that the strong El Nino of 1997-1998 brought heavy rainfall to the deserts of Peru, but did not bring significant rain to the central Atacama in Chile. Dew occurred at our station frequently following high nighttime relative humidity, but is not a significant source of moisture in the soil or under stones. Groundwater also does not contribute to surface moisture. Only the one rain event of 2.3 mm resulted in liquid water in the soil and beneath stones for a total of only 65-85 h over 4 years. The paucity of liquid water under stones is consistent with the apparent absence of hypolithic (under-stone) cyanobacteria, the only known primary producers in such extreme deserts.

Tile Drainage Expansion Detection using Satellite Soil Moisture Dynamics

NASA Astrophysics Data System (ADS)

Jacobs, J. M.; Cho, E.; Jia, X.

2017-12-01

In the past two decades, tile drainage installation has accelerated throughout the Red River of the North Basin (RRB) in parts of western Minnesota, eastern North Dakota, and a small area of northeastern South Dakota, because the flat topography and low-permeability soils in this region necessitated the removal of excess water to improve crop production. Interestingly, streamflow in the Red River has markedly increased and six of 13 major floods during the past century have occurred since the late 1990s. It has been suggested that the increase in RRB flooding could be due to change in agricultural practices, including extensive tile drainage installation. Reliable information on existing and future tile drainage installation is greatly needed to capture the rapid extension of tile drainage systems and to locate tile drainage systems in the north central U.S. including the RRB region. However, there are few reliable data of tile drainage installation records, except tile drainage permit records in the Bois de Sioux watershed (a sub-basin in southern part of the RRB where permits are required for tile drainage installation). This study presents a tile drainage expansion detection method based on a physical principle that the soil-drying rate may increase with increasing tile drainage for a given area. In order to capture the rate of change in soil drying rate with time over entire RRB (101,500 km2), two satellite-based microwave soil moisture records from the Advanced Microwave Scanning Radiometer for Earth Observing System (AMSR-E) and AMSR2 were used during 2002 to 2016. In this study, a sub-watershed level (HUC10) potential tile drainage growth map was developed and the results show good agreement with tile drainage permit records of six sub-watersheds in the Bois de Sioux watershed. Future analyses will include improvement of the potential tile drainage map through additional information using optical- and thermal-based sensor products and evaluation of its hydrological impacts on intensity, duration, and frequency of extreme streamflow from watershed to basin scale.

Survivability of Microbes in Mars Wind Blown Dust Environment

NASA Technical Reports Server (NTRS)

Mancinelli, Rocco L.; Klovstad, Melisa R.; Fonda, Mark L.; DeVincenzi, Donald (Technical Monitor)

2000-01-01

Although the probability of Earth microbes growing (dividing) in the Martian environment is extremely low, the probability of their survival on the Martian surface is unknown. During the course of landed missions to Mars terrestrial microbes may reach the surface of Mars via inadequately sterilized spacecraft landers, rovers, or through accidental impact of orbiters. This investigation studied the potential for Earth microbes to survive in the windblown dust on the surface of Mars. The rationale for the study comes from the fact that Mars regularly has huge dust storms that engulf the planet, shading the surface from solar UV radiation. These storms serve as a mechanism for global transfer of dust particles. If live organisms were to be transported to the surface of Mars they could be picked up with the dust during a dust storm and transported across the planet. Washed, dried spores of Bacillus subtilis strain HA 101 were aseptically mixed with sterile sieved (size range of 1-5microns) Mars soil standard (obtained from NASA Johnson Space Center, Houston, Texas, USA), or Fe-montmorillonite such that the number of microbes equals 5 x 10(exp 6)/g dry wt soil. The microbe soil mixture was placed in a spherical 8 L Mars simulation chamber equipped with a variable speed rotor, gas ports and an Oriel deuterium UV lamp emitting light of wave lengths 180-400 nm. The chamber was sealed, flushed with a simulated Martian atmosphere (96.9% CO2, 3% O2, 0.1% H2O), and the pressure brought to 10 torr. The lamp and rotor were switched on to begin the experiment. Periodically samples were collected from the chamber, and the numbers of microbial survivors g soil was determined using plate counts and the most probable number method (MPN). The data indicate that Bacillus subtilis spores dispersed with Mars analog soil in a Mars atmosphere (wind blown dust) survive exposure to 5.13 KJ m-2 UV radiation, suggesting that Mars wind blown dust has potential to the protect microbes from solar UV radiation.

Temporal dynamics of CO 2 and CH 4 loss potentials in response to rapid hydrological shifts in tidal freshwater wetland soils

DOE Office of Scientific and Technical Information (OSTI.GOV)

RoyChowdhury, Taniya; Bramer, Lisa; Hoyt, David W.

tEarth System Models predict climate extremes that will impact regional and global hydrology. Aquatic-terrestrial transition zones like wetlands are subjected to the immediate consequence of climate change with shifts in the magnitude and dynamics of hydrologic flow. Such fluctuating hydrology can alterthe nature and rate of biogeochemical transformations and significantly impact the carbon balance ofthe ecosystem. We tested the impacts of fluctuating hydrology and, specifically, the role of antecedentmoisture conditions in determining the dominant carbon loss mechanisms in soils sampled from a tidalfreshwater wetland system in the lower Columbia River, WA, USA. Our objective was to understand shiftsin biogeochemical processesmore » in response to changing soil moisture, based on soil respiration and methaneproduction rates, and to elucidate such responses based on the observed electron acceptor and metaboliteprofiles under laboratory conditions. Metabolomics and biogeochemical process rates provided evidencethat soil redox was the principal factor driving metabolic function. Fluctuating redox conditions alteredterminal electron acceptor and donor availability and recovery strengths of their concentrations in soilsuch that a disproportionate release of carbon dioxide stemmed from alternative anaerobic degradationprocesses like sulfate and iron reduction compared to carbon loss due to methanogenesis. Our resultsshow that extended and short-term saturation created conditions conducive to increasing metaboliteavailability for anaerobic decomposition processes, with a significant lag in methanogenesis. In contrast,extended drying caused a cellular-level stress response and rapid recycling of alternate electron acceptors.« less

Temporal dynamics of CO2and CH4 loss potentials in response to rapid hydrological shifts in tidal freshwater wetland soils

DOE Office of Scientific and Technical Information (OSTI.GOV)

Roy Chowdhury, Taniya; Bramer, Lisa M.; Hoyt, Davi

2018-04-15

tEarth System Models predict climate extremes that will impact regional and global hydrology. Aquatic-terrestrial transition zones like wetlands are subjected to the immediate consequence of climate change with shifts in the magnitude and dynamics of hydrologic flow. Such fluctuating hydrology can alterthe nature and rate of biogeochemical transformations and significantly impact the carbon balance ofthe ecosystem. We tested the impacts of fluctuating hydrology and, specifically, the role of antecedentmoisture conditions in determining the dominant carbon loss mechanisms in soils sampled from a tidalfreshwater wetland system in the lower Columbia River, WA, USA. Our objective was to understand shiftsin biogeochemical processesmore » in response to changing soil moisture, based on soil respiration and methaneproduction rates, and to elucidate such responses based on the observed electron acceptor and metaboliteprofiles under laboratory conditions. Metabolomics and biogeochemical process rates provided evidencethat soil redox was the principal factor driving metabolic function. Fluctuating redox conditions alteredterminal electron acceptor and donor availability and recovery strengths of their concentrations in soilsuch that a disproportionate release of carbon dioxide stemmed from alternative anaerobic degradationprocesses like sulfate and iron reduction compared to carbon loss due to methanogenesis. Our resultsshow that extended and short-term saturation created conditions conducive to increasing metaboliteavailability for anaerobic decomposition processes, with a significant lag in methanogenesis. In contrast,extended drying caused a cellular-level stress response and rapid recycling of alternate electron acceptors.« less

Record dry summer in 2015 challenges precipitation projections in Central Europe.

PubMed

Orth, René; Zscheischler, Jakob; Seneviratne, Sonia I

2016-06-21

Central Europe was characterized by a humid-temperate climate in the 20(th) century. Climate change projections suggest that climate in this area will shift towards warmer temperatures by the end of the 21(st) century, while projected precipitation changes are highly uncertain. Here we show that the 2015 summer rainfall was the lowest on record since 1901 in Central Europe, and that climate models that perform best in the three driest years of the historical time period 1901-2015 project stronger drying trends in the 21(st) century than models that perform best in the remaining years. Analyses of precipitation and derived soil moisture reveal that the 2015 event was drier than both the recent 2003 or 2010 extreme summers in Central Europe. Additionally there are large anomalies in satellite-derived vegetation greenness. In terms of precipitation and temperature anomalies, the 2015 summer in Central Europe is found to lie between historical climate in the region and that characteristic of the Mediterranean area. Even though the models best capturing past droughts are not necessarily generally more reliable in the future, the 2015 drought event illustrates that potential future drying trends have severe implications and could be stronger than commonly assumed from the entire IPCC AR5 model ensemble.

Testing conceptual and physically based soil hydrology schemes against observations for the Amazon Basin

NASA Astrophysics Data System (ADS)

Guimberteau, M.; Ducharne, A.; Ciais, P.; Boisier, J. P.; Peng, S.; De Weirdt, M.; Verbeeck, H.

2014-06-01

This study analyzes the performance of the two soil hydrology schemes of the land surface model ORCHIDEE in estimating Amazonian hydrology and phenology for five major sub-basins (Xingu, Tapajós, Madeira, Solimões and Negro), during the 29-year period 1980-2008. A simple 2-layer scheme with a bucket topped by an evaporative layer is compared to an 11-layer diffusion scheme. The soil schemes are coupled with a river routing module and a process model of plant physiology, phenology and carbon dynamics. The simulated water budget and vegetation functioning components are compared with several data sets at sub-basin scale. The use of the 11-layer soil diffusion scheme does not significantly change the Amazonian water budget simulation when compared to the 2-layer soil scheme (+3.1 and -3.0% in evapotranspiration and river discharge, respectively). However, the higher water-holding capacity of the soil and the physically based representation of runoff and drainage in the 11-layer soil diffusion scheme result in more dynamic soil water storage variation and improved simulation of the total terrestrial water storage when compared to GRACE satellite estimates. The greater soil water storage within the 11-layer scheme also results in increased dry-season evapotranspiration (+0.5 mm d-1, +17%) and improves river discharge simulation in the southeastern sub-basins such as the Xingu. Evapotranspiration over this sub-basin is sustained during the whole dry season with the 11-layer soil diffusion scheme, whereas the 2-layer scheme limits it after only 2 dry months. Lower plant drought stress simulated by the 11-layer soil diffusion scheme leads to better simulation of the seasonal cycle of photosynthesis (GPP) when compared to a GPP data-driven model based on eddy covariance and satellite greenness measurements. A dry-season length between 4 and 7 months over the entire Amazon Basin is found to be critical in distinguishing differences in hydrological feedbacks between the soil and the vegetation cover simulated by the two soil schemes. On average, the multilayer soil diffusion scheme provides little improvement in simulated hydrology over the wet tropical Amazonian sub-basins, but a more significant improvement is found over the drier sub-basins. The use of a multilayer soil diffusion scheme might become critical for assessments of future hydrological changes, especially in southern regions of the Amazon Basin where longer dry seasons and more severe droughts are expected in the next century.

Precipitation regime effects on the transport of microbial-derived organic matter from soils to surface waters

NASA Astrophysics Data System (ADS)

Pissarello, Anna; Lechtenfeld, Oliver; Miltner, Anja; Kästner, Matthias

2017-04-01

In the last decades, decreases in soil organic matter (SOM) content and increases of dissolved organic carbon (DOC) concentrations in surface water bodies have been recorded in the northern hemisphere. These have severe consequences for soil fertility and for drinking water purification, respectively. We hypothesize that microbially degraded SOM is a potential source of the additional DOC in the surface water. Recently, rain events have become more extreme, resulting in longer droughts and more intense rain events. These changes in the precipitation regime may increase the input of DOC into surface waters, which occurs mainly directly after heavy rain events. Therefore, our interest was to evaluate the role of variations of the water regime on the mobilization of the DOC from soil organic matter to soil solution. Flow-through column experiments were conducted under extreme precipitation scenarios (from continuously wet to pronounced drying and rewetting) in the laboratory in order to test how fluctuation in the water content influences DOC concentration and composition in the leachates. In our experiment we analyzed both soil respiration and DOM mobilization and found that the increased DOM mobilization after heavy rain events was also an effect of increased microbial activity after the drought stress was relieved. Furthermore, we considered that an important contribution to DOC formation and export may come from microbial processing of microbial biomass residues, residing within the particulate organic matter (POM) fraction. Therefore our aim was to link the necromass contribution to the exported DOC by characterizing DOC leachates of the soil columns at the molecular level and comparing them to fractions of bacterial DOC and POC obtained from an Escherichia coli pure culture, by using ultra-high-resolution methods such as Electrospray Ionization and Matrix assisted laser desorption/ionization Fourier transform ion cyclotron resonance mass spectrometry (ESI-FTICR-MS and MALDI-FTICR-MS, respectively). The results help to relate the origin of organic matter to typical chemical composition patterns and to allow quantification of the relative contributions of plant and microbe-derived material to NOM and how they are affected by the different water regimes. The results of this experiment consent to link SOM degradation and DOC mobilization and to understand the role of water regime variations for these processes.

Changes in Concurrent Precipitation and Temperature Extremes

DOE PAGES

Hao, Zengchao; AghaKouchak, Amir; Phillips, Thomas J.

2013-08-01

While numerous studies have addressed changes in climate extremes, analyses of concurrence of climate extremes are scarce, and climate change effects on joint extremes are rarely considered. This study assesses the occurrence of joint (concurrent) monthly continental precipitation and temperature extremes in Climate Research Unit (CRU) and University of Delaware (UD) observations, and in 13 Coupled Model Intercomparison Project Phase 5 (CMIP5) global climate simulations. Moreover, the joint occurrences of precipitation and temperature extremes simulated by CMIP5 climate models are compared with those derived from the CRU and UD observations for warm/wet, warm/dry, cold/wet, and cold/dry combinations of joint extremes.more » The number of occurrences of these four combinations during the second half of the 20th century (1951–2004) is assessed on a common global grid. CRU and UD observations show substantial increases in the occurrence of joint warm/dry and warm/wet combinations for the period 1978–2004 relative to 1951–1977. The results show that with respect to the sign of change in the concurrent extremes, the CMIP5 climate model simulations are in reasonable overall agreement with observations. The results reveal notable discrepancies between regional patterns and the magnitude of change in individual climate model simulations relative to the observations of precipitation and temperature.« less

Heat waves reduce ecosystem carbon sink strength in a Eurasian meadow steppe.

PubMed

Qu, Luping; Chen, Jiquan; Dong, Gang; Jiang, Shicheng; Li, Linghao; Guo, Jixun; Shao, Changliang

2016-01-01

As a consequence of global change, intensity and frequency of extreme events such as heat waves (HW) have been increasing worldwide. By using a combination of continuous 60-year meteorological and 6-year tower-based carbon dioxide (CO2) flux measurements, we constructed a clear picture of a HWs effect on the dynamics of carbon, water, and vegetation on the Eurasian Songnen meadow steppe. The number of HWs in the Songnen meadow steppe began increasing since the 1980s and the rate of occurrence has advanced since the 2010s to higher than ever before. HWs can reduce the grassland carbon flux, while net ecosystem carbon exchange (NEE) will regularly fluctuate for 4-5 days during the HW before decreasing. However, ecosystem respiration (Re) and gross ecosystem production (GEP) decline from the beginning of the HW until the end, where Re and GEP will decrease 30% and 50%, respectively. When HWs last five days, water-use efficiency (WUE) will decrease by 26%, soil water content (SWC) by 30% and soil water potential (SWP) will increase by 38%. In addition, the soil temperature will still remain high after the HW although the air temperature will recover to its previous state. HWs, as an extreme weather event, have increased during the last two decades in the Songnen meadow steppe. HWs will reduce the carbon flux of the steppe and will cause a sustained impact. Drought may be the main reason why HWs decrease carbon flux. At the later stages of or after a HW, the ecosystem usually lacks water and the soil becomes so hot and dry that it prevents roots from absorbing enough water to maintain their metabolism. This is the main reason why this grassland carbon exchange decreases during and after HWs. Copyright © 2015 Elsevier Inc. All rights reserved.

Aspergillus and Penicillium (Eurotiales: Trichocomaceae) in soils of the Brazilian tropical dry forest: diversity in an area of environmental preservation.

PubMed

Barbosa, Renan do Nascimento; Bezerra, Jadson Diogo Pereira; Costa, Phelipe Manoel Oller; de Lima-Júnior, Nelson Correia; Alves de Souza Galvão, Ivana Roberta Gomes; Alves dos Santos-Júnior, Anthony; Fernandes, Maria José; de Souza-Motta, Cristina Maria; Oliveira, Neiva Tinti

2016-03-01

Soil is a complex biological system that plays a key role for plants and animals, especially in dry forests such as the Caatinga. Fungi from soils, such as Aspergillus and Penicillium, can be used as bioindica- tors for biodiversity conservation. The aim of this study was to isolate and identify species of Aspergillus and Penicillium in soil, from the municipalities of Tupanatinga and Ibimirim, with dry forests, in the Catimbau National Park. Five collections were performed in each area during the drought season of 2012, totaling 25 soil samples per area. Fungi were isolated by suspending soil samples in sterile distilled water and plating on Sabouraud Agar media plus Chloramphenicol and Rose Bengal, and Glycerol Dicloran Agar. Isolates were identified by morphological taxonomy in the Culture Collection Laboratory and confirmed by sequencing of the Internal Transcribed Spacer of rDNA. A total of 42 species were identified, of which 22 belong to the genus Aspergillus and 20 to Penicillium. Penicillium isolates showed uniform distribution from the collecting area in Tupanatinga, and the evenness indices found were 0.92 and 0.88 in Tupanatinga and Ibimirim, respectively. Among isolates of Aspergillus evenness, the value found in Tupanatinga (0.85) was very close to that found in Ibimirim (0.86). High diversity and low dominance of fungi in soil samples was observed. These results con- tributed to the estimation of fungal diversity in dry environments of the Caatinga, where diversity is decreasing in soils that have undergone disturbance.

Volatilization of pesticides from the bare soil surface: evaluation of the humidity effect.

PubMed

Schneider, Martina; Endo, Satoshi; Goss, Kai-Uwe

2013-01-01

Volatilization of pesticides from soils under dry conditions (water content below the permanent wilting point) can be significantly influenced by sorption to hydrated mineral surfaces. This sorption process strongly depends on the water activity, expressed as equilibrium relative humidity in the pore space of the soil, and on the available surface area of the hydrated minerals. In this study, the influence of different humidity regimes on the volatilization of two pesticides (triallate and trifluralin) was demonstrated with a bench-scale wind tunnel system that allowed the establishment of well controlled humidity conditions within the soil. In the experiment starting with very dry conditions, increasing the relative humidity in the adjacent air from 60 to 85% resulted in an up to 8 times higher volatilization rate of the pesticides. An additional strong increase in volatilization (up to 3 times higher) was caused by a simulated rain event, which eliminates all sorption sites associated to mineral surfaces. In agreement with this interpretation, the comparison of two soils suggested that mineral surface area was the soil property that governs the volatilization under dry conditions, whereas soil organic matter was the controlling variable under wet conditions. In contrast to expectations, the use of a novel capsulated suspension for triallate showed the same humidity effects and no substantially lower volatilization rates in comparison to the regular formulation. This study demonstrated that humidity effects on pesticide volatilization can be interpreted via the mechanism of sorption to mineral surfaces under dry conditions. Copyright © by the American Society of Agronomy, Crop Science Society of America, and Soil Science Society of America, Inc.

Degradation of anionic surfactants during drying of UASBR sludges on sand drying beds.

PubMed

Mungray, Arvind Kumar; Kumar, Pradeep

2008-09-01

Anionic surfactant (AS) concentrations in wet up-flow anaerobic sludge blanket reactor (UASBR) sludges from five sewage treatment plants (STPs) were found to range from 4480 to 9,233 mg kg(-1)dry wt. (average 7,347 mg kg(-1)dry wt.) over a period of 18 months. After drying on sand drying beds (SDBs), AS in dried-stabilized sludges averaged 1,452 mg kg(-1)dry wt., a reduction of around 80%. The kinetics of drying followed simple first-order reduction of moisture with value of drying constant (k(d))=0.051 d(-1). Reduction of AS also followed first-order kinetics. AS degradation rate constant (k(AS)) was found to be 0.034 d(-1) and half-life of AS as 20 days. The order of rates of removal observed was k(d)>k(AS)>k(COD)>k(OM) (drying >AS degradation>COD reduction>organic matter reduction). For the three applications of dried-stabilized sludges (soil, agricultural soil, grassland), values of risk quotient (RQ) were found to be <1, indicating no risk.

Land application of mine water causes minimal uranium loss offsite in the wet-dry tropics: Ranger Uranium Mine, Northern Territory, Australia.

PubMed

Mumtaz, Saqib; Streten, Claire; Parry, David L; McGuinness, Keith A; Lu, Ping; Gibb, Karen S

2015-11-01

Ranger Uranium Mine (RUM) is situated in the wet-dry tropics of Northern Australia. Land application (irrigation) of stockpile (ore and waste) runoff water to natural woodland on the mine lease is a key part of water management at the mine. Consequently, the soil in these Land Application Areas (LAAs) presents a range of uranium (U) and other metals concentrations. Knowledge of seasonal and temporal changes in soil U and physicochemical parameters at RUM LAAs is important to develop suitable management and rehabilitation strategies. Therefore, soil samples were collected from low, medium, high and very high U sites at RUM LAAs for two consecutive years and the effect of time and season on soil physicochemical parameters particularly U and other major solutes applied in irrigation water was measured. Concentrations of some of the solutes applied in the irrigation water such as sulphur (S), iron (Fe) and calcium (Ca) showed significant seasonal and temporal changes. Soil S, Fe and Ca concentration decreased from year 1 to year 2 and from dry to wet seasons during both years. Soil U followed the same pattern except that we recorded an increase in soil U concentrations at most of the RUM LAAs after year 2 wet season compared to year 2 dry season. Thus, these sites did not show a considerable decrease in soil U concentration from year 1 to year 2. Sites which contained elevated U after wet season 2 also had higher moisture content which suggests that pooling of U containing rainwater at these sites may be responsible for elevated U. Thus, U may be redistributed within RUM LAAs due to surface water movement. The study also suggested that a decrease in U concentrations in LAA soils at very high U (>900 mg kg(-1)) sites is most likely due to transport of particulate matter bound U by surface runoff and U may not be lost from the surface soil due to vertical movement through the soil profile. Uranium attached to particulate matter may reduce its potential for environmental impact. These findings suggest that U is effectively adsorbed by the soils and thus land application may serve as a useful tool for U management in the wet-dry tropics of northern Australia. Copyright © 2015 Elsevier Ltd. All rights reserved.

Hysteresis and uncertainty in soil water-retention curve parameters

USGS Publications Warehouse

Likos, William J.; Lu, Ning; Godt, Jonathan W.

2014-01-01

Accurate estimates of soil hydraulic parameters representing wetting and drying paths are required for predicting hydraulic and mechanical responses in a large number of applications. A comprehensive suite of laboratory experiments was conducted to measure hysteretic soil-water characteristic curves (SWCCs) representing a wide range of soil types. Results were used to quantitatively assess differences and uncertainty in three simplifications frequently adopted to estimate wetting-path SWCC parameters from more easily measured drying curves. They are the following: (1) αw=2αd, (2) nw=nd, and (3) θws=θds, where α, n, and θs are fitting parameters entering van Genuchten’s commonly adopted SWCC model, and the superscripts w and d indicate wetting and drying paths, respectively. The average ratio αw/αd for the data set was 2.24±1.25. Nominally cohesive soils had a lower αw/αd ratio (1.73±0.94) than nominally cohesionless soils (3.14±1.27). The average nw/nd ratio was 1.01±0.11 with no significant dependency on soil type, thus confirming the nw=nd simplification for a wider range of soil types than previously available. Water content at zero suction during wetting (θws) was consistently less than during drying (θds) owing to air entrapment. The θws/θds ratio averaged 0.85±0.10 and was comparable for nominally cohesive (0.87±0.11) and cohesionless (0.81±0.08) soils. Regression statistics are provided to quantitatively account for uncertainty in estimating hysteretic retention curves. Practical consequences are demonstrated for two case studies.

Reduced dry season transpiration is coupled with shallow soil water use in tropical montane forest trees.

PubMed

Muñoz-Villers, Lyssette E; Holwerda, Friso; Alvarado-Barrientos, M Susana; Geissert, Daniel R; Dawson, Todd E

2018-06-25

Tropical montane cloud forests (TMCF) are ecosystems particularly sensitive to climate change; however, the effects of warmer and drier conditions on TMCF ecohydrology remain poorly understood. To investigate functional responses of TMCF trees to reduced water availability, we conducted a study during the 2014 dry season in the lower altitudinal limit of TMCF in central Veracruz, Mexico. Temporal variations of transpiration, depth of water uptake and tree water sources were examined for three dominant, brevi-deciduous species using micrometeorological, sap flow and soil moisture measurements, in combination with oxygen and hydrogen stable isotope composition of rainfall, tree xylem, soil and stream water. Over the course of the dry season, reductions in crown conductance and transpiration were observed in canopy species (43 and 34%, respectively) and mid-story trees (23 and 8%), as atmospheric demand increased and soil moisture decreased. Canopy species consistently showed more depleted isotope values compared to mid-story trees. However, MixSIAR Bayesian model results showed that the evaporated (enriched) soil water pool was the main source for trees despite reduced soil moisture. Additionally, while increases in tree water uptake from deeper to shallower soil water sources occurred, concomitant decreases in transpiration were observed as the dry season progressed. A larger reduction in deep soil water use was observed for canopy species (from 79 ± 19 to 24 ± 20%) compared to mid-story trees (from 12 ± 17 to 10 ± 12%). The increase in shallower soil water sources may reflect a trade-off between water and nutrient requirements in this forest.

Seasonal soil moisture and drought occurrence in Europe in CMIP5 projections for the 21st century

NASA Astrophysics Data System (ADS)

Ruosteenoja, Kimmo; Markkanen, Tiina; Venäläinen, Ari; Räisänen, Petri; Peltola, Heli

2018-02-01

Projections for near-surface soil moisture content in Europe for the 21st century were derived from simulations performed with 26 CMIP5 global climate models (GCMs). Two Representative Concentration Pathways, RCP4.5 and RCP8.5, were considered. Unlike in previous research in general, projections were calculated separately for all four calendar seasons. To make the moisture contents simulated by the various GCMs commensurate, the moisture data were normalized by the corresponding local maxima found in the output of each individual GCM. A majority of the GCMs proved to perform satisfactorily in simulating the geographical distribution of recent soil moisture in the warm season, the spatial correlation with an satellite-derived estimate varying between 0.4 and 0.8. In southern Europe, long-term mean soil moisture is projected to decline substantially in all seasons. In summer and autumn, pronounced soil drying also afflicts western and central Europe. In northern Europe, drying mainly occurs in spring, in correspondence with an earlier melt of snow and soil frost. The spatial pattern of drying is qualitatively similar for both RCP scenarios, but weaker in magnitude under RCP4.5. In general, those GCMs that simulate the largest decreases in precipitation and increases in temperature and solar radiation tend to produce the most severe soil drying. Concurrently with the reduction of time-mean soil moisture, episodes with an anomalously low soil moisture, occurring once in 10 years in the recent past simulations, become far more common. In southern Europe by the late 21st century under RCP8.5, such events would be experienced about every second year.

Hydraulic redistribution in a Mediterranean wild olive-pasture ecosystem: A key to tree survival and a limit to tree-patch size.

NASA Astrophysics Data System (ADS)

Curreli, Matteo; Montaldo, Nicola; Oren, Ram

2017-04-01

In water-limited environments, such as certain Mediterranean ecosystems, trees may survive prolonged droughts by uptake of water by dimorphic root system: deep roots, growing vertically, and shallower lateral roots, extending beyond the crown projection of tree clumps into zones of seasonal vegetative cover. In such ecosystems, therefore, the balance between soil water under tree canopy versus that in treeless patches plays a crucial role on sustaining tree physiological performance and surface water fluxes during drought periods. The study has been performed at the Orroli site, Sardinia (Italy). The landscape is covered by patchy vegetation: wild olives trees in clumps, herbaceous species, drying to bare soil in late spring. The climate is Mediterranean maritime with long droughts from May to October, and an historical mean yearly rain of about 670 mm concentrated in the autumn and winter months. Soil depth varies from 10 to 50 cm, with underlying fractured rocky layer of basalt. From 2003, a 10 meters micrometeorological tower equipped with eddy-covariance system has been used for measuring water and energy surface fluxes, as well as key state variables (e.g. leaf and soil skin temperature, radiations, air humidity and wind velocity). Soil moisture was measured with five soil water reflectometers (two below the olive canopy and three in patches with pasture vegetation alternating with bare soil in the dry season). Early analyses show that wild olive continue to transpire even as the soil dries and the pasture desiccates. In 2015, to estimate plant water use and in the context of soil water dynamic, 33 Granier-type thermal dissipation probes were installed for estimating sap flow in stems of wild olives trees, 40 cm aboveground, in representative trees over the eddy-covariance foot-print. The combined data of sap flow, soil water content, and eddy covariance, revealed hydraulic redistribution system through the plant and the soil at different layers, allowing to quantify the reliance of the system on different horizontally and vertically differentiated soil compartments. Results shows that during light hours, until transpiration decreases in midday, shallow roots uptake deplete the water content in the upper layer. As transpiration decreases, hydraulically redistributed water provides for both transpiration of wild olives and recharge of shallow soil layers. This buffering, attained by long recharge time of shallow soil, allow woody vegetation to remain physiologically active during very dry conditions. The hydraulically redistributed water is the main source of water for evapotranspiration in the dry summer, and its relevance increases with decreasing water availability. Thus, the spatial coverage and distribution of tree clumps is regulated by the soil water available in the inter-tree clump areas, suggesting that, if Mediterranean areas dry as predicted by IPCC, the proportion of an area occupied by tree clumps will shrink in the future, with predictable consequences to ecosystem services.

Do Reductions in Dry Season Transpiration Allow Shallow Soil Water Uptake to Persist in a Tropical Lower Montane Cloud Forest?

NASA Astrophysics Data System (ADS)

Munoz Villers, L. E.; Holwerda, F.; Alvarado-Barrientos, M. S.; Goldsmith, G. R.; Geissert Kientz, D. R.; González Martínez, T. M.; Dawson, T. E.

2016-12-01

Tropical montane cloud forests (TMCF) are ecosystems particularly sensitive to climate change; however, the effects of warmer and drier conditions on TMCF water cycling remain poorly understood. To investigate the plant functional response to reduced water availability, we conducted a study during the mid to late dry season (2014) in the lower limit (1,325 m asl) of the TMCF belt (1200-2500 m asl) in central Veracruz, Mexico. The temporal variation of transpiration rates of dominant upper canopy and mid-story tree species, depth of water uptake, as well as tree water sources were examined using micrometeorological, sapflow and soil moisture measurements, in combination with data on stable isotope (δ18O and δ2H) composition of rain, tree xylem, soil (bulk and low suction-lysimeter) and stream water. The sapflow data suggest that crown conductances decreased as temperature and vapor pressure deficit increased, and soil moisture decreased from the mid to late dry season. Across all samplings (January 21, April 12 and 26), upper canopy species (Quercus spp.) showed more depleted (negative) isotope values compared to mid-story trees (Carpinus tropicalis). Overall, we found that the evaporated soil water pool was the main source for the trees. Furthermore, our MixSIAR Bayesian mixing model results showed that the depth of tree water uptake changed over the course of the dry season. Unexpectedly, a shift in water uptake from deeper (60-120 cm depth) to shallower soil water (0-30 cm) sources was observed, coinciding with the decreases in transpiration rates towards the end of the dry season. A larger reduction in deep soil water contributions was observed for upper canopy trees (from 70±14 to 22±15%) than for mid-story species (from 10±13 to 7±10%). The use of shallow soil water by trees during the dry season seems consistent with the greater root biomass and higher macronutrient concentrations found in the first 10 cm of the soil profiles. These findings are an important step towards enhancing our understanding about the water movement through this TMCF ecosystem, providing information that may be used for forest protection and management under the increasing climate change pressures.

Ecotoxicological study of arsenic and lead contaminated soils in former orchards at the Hanford Site, USA.

PubMed

Delistraty, Damon; Yokel, Jerry

2014-01-01

The purpose of this study was to assess ecotoxicity of former orchard soils contaminated with lead arsenate pesticides at the Hanford Site in Washington state (USA). Surface soil, plant, and invertebrate samples were collected from 11 sites in former orchard areas. Mean (standard deviation [SD]) for As and Pb in soil were 39.5 (40.6) and 208 (142) mg/kg dry wt, respectively (n = 11). These concentrations exceeded Hanford background levels but were similar to orchard soils elsewhere. In our study, As and Pb soil concentrations were positively and significantly correlated (r = 0.87, Bonferroni P < 0.05). Speciation of total inorganic As in soil (n = 6) demonstrated that As+5 was the dominant form (>99%). Mean (SD) for As and Pb in cheatgrass were 3.9 (7.9) and 12.4 (20.0) mg/kg dry wt, respectively (n = 11), while mean (SD) for As and Pb in darkling beetles were 5.4 (2.6) and 3.9 (3.0) mg/kg dry wt, respectively (n = 8). Linear regressions were constructed to estimate soil to cheatgrass and soil to darkling beetle uptake for As and Pb. These were significant (Bonferroni P < 0.05) only for cheatgrass versus soil (As) and darkling beetle versus soil (Pb). Standardized lettuce seedling and earthworm bioassays were performed with a subset of soil samples (n = 6). No significant effects (P > 0.05) were observed in lettuce survival or growth nor in earthworm survival or sublethal effects. Based on these bioassays, unbounded no observed effect concentrations (NOECs) in soil for As and Pb were 128 and 390 mg/kg dry wt, respectively. However, our range of soil concentrations generally overlapped a set of ecotoxicological benchmarks reported in the literature. Given uncertainty and limited sampling related to our NOECs, as well as uncertainty in generic benchmarks from the literature, further study is needed to refine characterization of As and Pb ecotoxicity in former orchard soils at the Hanford Site. Copyright © 2011 Wiley Periodicals, Inc.

Temporal dynamics of CO 2 and CH 4 loss potentials in response to rapid hydrological shifts in tidal freshwater wetland soils

DOE Office of Scientific and Technical Information (OSTI.GOV)

RoyChowdhury, Taniya; Bramer, Lisa; Hoyt, David W.

Earth System Models predict climate extremes that will impact regional and global hydrology. Aquatic-terrestrial transition zones like wetlands are subjected to the immediate consequence of climate change with shifts in the magnitude and dynamics of hydrologic flow. Such fluctuating hydrology can alter the nature and rate of biogeochemical transformations and significantly impact the carbon balance of the ecosystem. We tested the impacts of fluctuating hydrology and, specifically, the role of antecedent moisture conditions in determining the dominant carbon loss mechanisms in soils sampled from a tidal freshwater wetland system in the lower Columbia River, WA, USA. The objective was tomore » understand shifts in biogeochemical processes in response to changing soil moisture, based on soil respiration and methane production rates, and to elucidate such responses based on the observed electron acceptor and metabolite profiles under laboratory conditions. Metabolomics and biogeochemical process rates provided evidence that soil redox was the principal factor driving metabolic function. Fluctuating redox conditions altered terminal electron acceptor and donor availability and recovery strengths of their concentrations in soil such that a disproportionate release of carbon dioxide stemmed from alternative anaerobic degradation processes like sulfate and iron reduction compared to carbon loss due to methanogenesis. These results show that extended and short-term saturation created conditions conducive to increasing metabolite availability for anaerobic decomposition processes, with a significant lag in methanogenesis. In contrast, extended drying caused a cellular-level stress response and rapid recycling of alternate electron acceptors.« less

Temporal dynamics of CO 2 and CH 4 loss potentials in response to rapid hydrological shifts in tidal freshwater wetland soils

DOE PAGES

RoyChowdhury, Taniya; Bramer, Lisa; Hoyt, David W.; ...

2017-06-27

Earth System Models predict climate extremes that will impact regional and global hydrology. Aquatic-terrestrial transition zones like wetlands are subjected to the immediate consequence of climate change with shifts in the magnitude and dynamics of hydrologic flow. Such fluctuating hydrology can alter the nature and rate of biogeochemical transformations and significantly impact the carbon balance of the ecosystem. We tested the impacts of fluctuating hydrology and, specifically, the role of antecedent moisture conditions in determining the dominant carbon loss mechanisms in soils sampled from a tidal freshwater wetland system in the lower Columbia River, WA, USA. The objective was tomore » understand shifts in biogeochemical processes in response to changing soil moisture, based on soil respiration and methane production rates, and to elucidate such responses based on the observed electron acceptor and metabolite profiles under laboratory conditions. Metabolomics and biogeochemical process rates provided evidence that soil redox was the principal factor driving metabolic function. Fluctuating redox conditions altered terminal electron acceptor and donor availability and recovery strengths of their concentrations in soil such that a disproportionate release of carbon dioxide stemmed from alternative anaerobic degradation processes like sulfate and iron reduction compared to carbon loss due to methanogenesis. These results show that extended and short-term saturation created conditions conducive to increasing metabolite availability for anaerobic decomposition processes, with a significant lag in methanogenesis. In contrast, extended drying caused a cellular-level stress response and rapid recycling of alternate electron acceptors.« less

Literature review: Phytoaccumulation of chromium, uranium, and plutonium in plant systems

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hossner, L.R.; Loeppert, R.H.; Newton, R.J.

1998-05-01

Phytoremediation is an integrated multidisciplinary approach to the cleanup of contaminated soils, which combines the disciplines of plant physiology, soil chemistry, and soil microbiology. Metal hyperaccumulator plants are attracting increasing attention because of their potential application in decontamination of metal-polluted soils. Traditional engineering technologies may be too expensive for the remediation of most sites. Removal of metals from these soils using accumulator plants is the goal of phytoremediation. The emphasis of this review has been placed on chromium (Cr), plutonium (Pu), and uranium (U). With the exception of Cr, these metals and their decay products exhibit two problems, specifically, radiationmore » dose hazards and their chemical toxicity. The radiation hazard introduces the need for special precautions in reclamation beyond that associated with non-radioactive metals. The uptake of beneficial metals by plants occurs predominantly by way of channels, pores, and transporters in the root plasma membrane. Plants characteristically exhibit a remarkable capacity to absorb what they need and exclude what they don`t need. But most vascular plants absorb toxic and heavy metals through their roots to some extent, though to varying degrees, from negligible to substantial. Sometimes absorption occurs because of the chemical similarity between beneficial and toxic metals. Some plants utilize exclusion mechanisms, where there is a reduced uptake by the roots or a restricted transport of the metal from root to shoot. At the other extreme, hyperaccumulator plants absorb and concentrate metals in both roots and shoots. Some plant species endemic to metalliferous soils accumulate metals in percent concentrations in the leaf dry matter.« less

Wetting and drying of soil in response to precipitation: Data analysis, modeling, and forecasting

USGS Publications Warehouse

Basak, Aniruddha; Kulkarni, Chinmay; Schmidt, Kevin M.; Mengshoel, Ole

2016-01-01

This paper investigates methods to analyze and forecast soil moisture time series. We extend an existing Antecedent Water Index (AWI) model, which expresses soil moisture as a function of time and rainfall. Unfortunately, the existing AWI model does not forecast effectively for time periods beyond a few hours. To overcome this limitation, we develop a novel AWI-based model. Our model accumulates rainfall over a time interval and can fit a diverse range of wetting and drying curves. In addition, parameters in our model reflect hydrologic redistribution processes of gravity and suction.We validate our models using experimental soil moisture and rainfall time series data collected from steep gradient post-wildfire sites in Southern California, where rapid landscape change was observed in response to small to moderate rain storms. We found that our novel model fits the data for three distinct soil textures, occurring at different depths below the ground surface (5, 15, and 30 cm). Our model also successfully forecasts soil moisture trends, such as drying and wetting rate.

Effects of warming and drying of soils on the ectomycorrhizal community of a mixed Pinus contorta/Picea engelmannii stand in Yellowstone Park

NASA Technical Reports Server (NTRS)

Cullings, Kenneth; Finley, S. K.; Parker, V. T.; Makhija, S.; DeVincenzi, Donald L. (Technical Monitor)

2001-01-01

Restriction Fragment Length Polymorphisms (RFLPs) analyses were used to determine patterns of change in ectomycorrhizal community structure response to seasonal warming and drying of soils. Soil cores (42 total, 21 from cold and wet soil in early June, and 21 from dry, warm soil in late August) were collected from replicate blocks in a mixed-conifer forest stand in Yellowstone. Results indicated no significant differences in species richness (2.62 species/core, SE 0.2 in June; 3.25, SE 0.2 in August), however there was a significant effect on ectomycorrhizal infection (P<0.05), mean number of EM tips/core was significantly lower in June (185.8, SE 34) than in August (337 SE 78). Data indicated no difference in overall EM fungal species composition, however among system dominants, two species (Cortinarius 9 and Cortinarius 10) were more abundant in August than in June (P<0.02). The remaining dominant fungal species exhibited no differences in relative abundance. Results are discussed in relation to soil fertility and composition.

Earthworm tolerance to residual agricultural pesticide contamination: field and experimental assessment of detoxification capabilities.

PubMed

Givaudan, Nicolas; Binet, Françoise; Le Bot, Barbara; Wiegand, Claudia

2014-09-01

This study investigates if acclimatization to residual pesticide contamination in agricultural soils is reflected in detoxification, antioxidant enzyme activities and energy budget of earthworms. Five fields within a joint agricultural area exhibited different chemical and farming histories from conventional cultivation to organic pasture. Soil multiresidual pesticide analysis revealed up to 9 molecules including atrazine up to 2.4 ng g(-1) dry soil. Exposure history of endogeic Aporrectodea caliginosa and Allolobophora chlorotica modified their responses to pesticides. In the field, activities of soluble glutathione-S-transferases (sGST) and catalase increased with soil pesticide contamination in A. caliginosa. Pesticide stress was reflected in depletion of energy reserves in A. chlorotica. Acute exposure of pre-adapted and naïve A. caliginosa to pesticides (fungicide Opus(®), 0.1 μg active ingredient epoxiconazole g(-1) dry soil, RoundUp Flash(®), 2.5 μg active ingredient glyphosate g(-1) dry soil, and their mixture), revealed that environmental pre-exposure accelerated activation of the detoxification enzyme sGST towards epoxiconazole. Copyright © 2014 Elsevier Ltd. All rights reserved.

Dechlorination of PCBs, CAHs, herbicides and pesticides neat and in soils at 25 degrees C using Na/NH3.

PubMed

Pittman, Charles U; He, Jinbao

2002-05-03

Na/NH3 reductions have been used to dehalogenate polychlorinated biphenyls (PCBs), chlorinated aliphatic hydrocarbons (CAHs) and pesticides at diffusion controlled rates at room temperature in model compound studies in both dry NH3 and when water was added. The rate ratio of dechlorination (aliphatic and aromatic compounds) versus reaction of the solvated electron with water is very large, allowing wet soils or sludges to be remediated without an unreasonable consumption of sodium. Several soils, purposely contaminated with 1,1,1-trichloroethane, 1-chlorooctane and tetrachloroethylene, were remediated by slurring the soils in NH3 followed by addition of sodium. The consumption of sodium per mole of chlorine removed was examined as a function of both the hazardous substrate's concentration in the soil and the amount of water present. The Na consumption per Cl removed increases as the amount of water increases and as the substrate concentration in soil decreases. However, remediation was still readily accomplished from 5000 to 3000ppm to sub ppm levels of RCl in the presence of substantial amounts of water. PCB- and dioxin-contaminated oils were remediated with Na/NH3 as were PCB-contaminated soils and sludges from contaminated sites. Ca/NH3 treatments also successfully remediated PCB-contaminated clay, sandy and organic soils but laboratory studies demonstrated that Ca was less efficient than Na when substantial amounts of water were present. The advantages of solvated electron reductions using Na/NH3 include: (1) very rapid dehalogenation rates at ambient temperature, (2) soils (even clay soils) break down into particles and slurry nicely in NH3, (3) liquid ammonia handling technology is well known and (4) removal from soils, recovery and recycle of ammonia is easy due to its low boiling point. Finally, dechlorination is extremely fast even for the 'corner' chlorines in the substrate Mirex (structure in Eq. (5)).

An advanced process-based distributed model for the investigation of rainfall-induced landslides: The effect of process representation and boundary conditions

NASA Astrophysics Data System (ADS)

Anagnostopoulos, Grigorios G.; Fatichi, Simone; Burlando, Paolo

2015-09-01

Extreme rainfall events are the major driver of shallow landslide occurrences in mountainous and steep terrain regions around the world. Subsurface hydrology has a dominant role on the initiation of rainfall-induced shallow landslides, since changes in the soil water content affect significantly the soil shear strength. Rainfall infiltration produces an increase of soil water potential, which is followed by a rapid drop in apparent cohesion. Especially on steep slopes of shallow soils, this loss of shear strength can lead to failure even in unsaturated conditions before positive water pressures are developed. We present HYDROlisthisis, a process-based model, fully distributed in space with fine time resolution, in order to investigate the interactions between surface and subsurface hydrology and shallow landslides initiation. Fundamental elements of the approach are the dependence of shear strength on the three-dimensional (3-D) field of soil water potential, as well as the temporal evolution of soil water potential during the wetting and drying phases. Specifically, 3-D variably saturated flow conditions, including soil hydraulic hysteresis and preferential flow phenomena, are simulated for the subsurface flow, coupled with a surface runoff routine based on the kinematic wave approximation. The geotechnical component of the model is based on a multidimensional limit equilibrium analysis, which takes into account the basic principles of unsaturated soil mechanics. A series of numerical simulations were carried out with various boundary conditions and using different hydrological and geotechnical components. Boundary conditions in terms of distributed soil depth were generated using both empirical and process-based models. The effect of including preferential flow and soil hydraulic hysteresis was tested together with the replacement of the infinite slope assumption with the multidimensional limit equilibrium analysis. The results show that boundary conditions play a crucial role in the model performance and that the introduced hydrological (preferential flow and soil hydraulic hysteresis) and geotechnical components (multidimensional limit equilibrium analysis) significantly improve predictive capabilities in the presented case study.

Landscape Change and Microbial Response in the McMurdo Dry Valleys, Antarctica: Preliminary Results

NASA Astrophysics Data System (ADS)

Fountain, A. G.; Levy, J.; Gooseff, M. N.; Van Horn, D. J.; Obryk, M.; Pettersson, R.; Telling, J. W.; Glennie, C. L.

2017-12-01

Permafrost in the McMurdo Dry Valleys (MDV), Antarctica is ubiquitous with active layer depths ranging from a few cm at the highest elevations to 1 m near sea level. Although many landscapes in this region have been considered stable over millennia, ad-hoc field observations have documented extreme geomorphic changes in the valley bottoms over the past decade. To assess these changes across the region, we compared a lidar dataset surveyed in the austral summers of 2001-2002 against one surveyed in 2014-2015. Results showed that the vertical resolution of the surveys was < 0.1m. However, a mounting bias of the NASA sensor reduced the resolution of the elevation differences and we ignored differences < ±0.25 m. The surveys revealed large (>1m) landscape changes, including stream channel incision into buried ice deposits (implying the advection of heat by stream water locally degrades thermokarst) and slope failures in thermokarst landforms from block failure and insolation-driven retreat. Smaller changes (<0.5 m) were observed in stream channels where lateral bank erosion intercepted buried ice, or in thermokarst ponds. The magnitude and rate of change is much larger than observed previously in this otherwise stable and slowly changing environment. Biological surveys and experimental manipulations show that wetted soils host microbial communities different from those hosted by adjacent dry soils, and are hotspots of biodiversity highly susceptible to changing physical conditions. In all cases field-checked, the association of sediment and rock debris blanketing buried ice was noted, indicating these are the most vulnerable landscapes to climate warming. Ground penetrating radar mapping of buried ice showed, however, that not all buried ice is associated with landscape change due to the depth of burial, slope, and proximity to stream water. Similarly, modeling of soil temperatures suggests a spatial heterogeneity in warming rates across the valley bottom, as a consequence of microclimatic influences, topographic shading and moisture content. Collectively, these conditions imply that landscapes in the MDV will become progressively unstable in a warming future as heat is increasingly transported to greater depths in the valley floor, and that these changes are likely to significantly impact the associated microbial communities.

A non-equilibrium model for soil heating and moisture transport during extreme surface heating: The soil (heat-moisture-vapor) HMV-Model Version

Treesearch

William Massman

2015-01-01

Increased use of prescribed fire by land managers and the increasing likelihood of wildfires due to climate change require an improved modeling capability of extreme heating of soils during fires. This issue is addressed here by developing and testing the soil (heat-moisture-vapor) HMVmodel, a 1-D (one-dimensional) non-equilibrium (liquid- vapor phase change)...

The effect of soil properties on the toxicity and bioaccumulation of Ag nanoparticles and Ag ions in Enchytraeus crypticus.

PubMed

Topuz, Emel; van Gestel, Cornelis A M

2017-10-01

Standard natural Lufa soils (2.2, 2.3 and 5M) with different organic carbon contents (0.67-1.61%) and pH CaCl2 (5.5-7.3) were spiked with ionic Ag (AgNO 3 ) and polyvinyl pyrrolidone (AgNP-PVP) and citrate (AgNP-Cit) coated Ag nanoparticles (NPs). Enchytraeus crypticus were exposed for 21 days to assess effects on survival and reproduction. Soil, pore water and animals were analyzed for Ag. AgNP-Cit had a strong increasing effect on soil pH, leading to high enchytraeid mortality at concentrations higher than 60-100mg Ag/kg dry soil which made it impossible to determine the influence of soil properties on its toxicity. LC50s were lower for AgNO 3 than for AgNP-PVP (92-112 and 335-425mg Ag/kg dry soil, respectively) and were not affected by soil properties. AgNO 3 and AgNP-PVP had comparable reproductive toxicity with EC50s of 26.9-75.2 and 28.2-92.3mg Ag/kg dry soil, respectively; toxicity linearly increased with decreasing organic carbon content of the soils but did not show a clear effect of soil pH. Ag uptake in the enchytraeids was higher at higher organic carbon content, but could not explain differences in toxicity between soils. This study indicates that the bioavailability of both ionic and nanoparticulate Ag is mainly affected by soil organic carbon, with little effect of soil pH. Copyright © 2017. Published by Elsevier Inc.

An annual model of SSM/I radiobrightness for dry soil

NASA Technical Reports Server (NTRS)

Liou, Yuei-An; England, A. W.

1992-01-01

An annual model is presented of the temperature structure within a homogeneous, dry soil halfspace that is subject to both diurnal and annual insolation, radiant heating from the atmosphere, sensible heat exchange with the atmosphere, and radiant cooling. The thermal constitutive properties of the soil are assumed to be constant so that the heat flow equation can be solved analytically. For computational economy, a variable time interval Laplace transform method is developed to predict the temperature.

Study on Strength Behavior of Organic Soil Stabilized with Fly Ash

PubMed Central

Molla, Md. Keramat Ali; Sarkar, Grytan

2017-01-01

The aim of this study is to investigate the effect of fly ash on the consistency, compactness, acidic properties, and strength of organic soil. The presence of organic content in the soil has detrimental impacts on the physical and strength behavior of soil. To investigate the effectiveness of fly ash in the stabilization of organic soil, two types of fly ashes (Type I and Type II) at different percentages were used. It is found that fly ash significantly reduces the plasticity index of the organic soil, whereas the liquid and plastic limits increase. The dry density of the fly ash-soil mixture increases significantly, while the water requirement reduces due to the addition of fly ash. The increase of dry density compromises higher strength. The increase of qu with the increase of fly ash content is mainly due to the pozzolanic reaction of fly ash, although the reduction in water content results from the addition of dry fly ash solid. Moreover, Type I fly ash contributes a higher value of qu compared to Type II fly ash. This is attributed to the characteristics of fly ash including CaO and CaO/SiO2 ratio. PMID:29085881

Invariant soil water potential at zero microbial respiration explained by hydrological discontinuity in dry soils

DOE PAGES

Manzoni, S.; Katul, G.

2014-09-30

We report that soil microbial respiration rates decrease with soil drying, ceasing below water potentials around -15 MPa. A proposed mechanism for this pattern is that under dry conditions, microbes are substrate limited because solute diffusivity is halted due to breaking of water film continuity. However, pore connectivity estimated from hydraulic conductivity and solute diffusivity (at Darcy's scale) is typically interrupted at much less negative water potentials than microbial respiration (-0.1 to -1 MPa). It is hypothesized here that the more negative respiration thresholds than at the Darcy's scale emerge because microbial activity is restricted to microscale soil patches thatmore » retain some hydrological connectivity even when it is lost at the macroscale. This hypothesis is explored using results from percolation theory and meta-analyses of respiration-water potential curves and hydrological percolation points. Lastly, when reducing the spatial scale from macroscale to microscale, hydrological and respiration thresholds become consistent, supporting the proposed hypothesis.« less

Modelling Water Flow through Paddy Soils under Alternate Wetting and Drying Irrigation Practice

NASA Astrophysics Data System (ADS)

Shekhar, S.; Mailapalli, D. R.; Das, B. S.; Raghuwanshi, N. S.

2017-12-01

Alternate wetting and drying (AWD) irrigation practice in paddy cultivation requires an optimum soil moisture stress (OSMS) level at which irrigation water savings can be maximized without compromising the yield reduction. Determining OSMS experimentally is challenging and only possible with appropriate modeling tools. In this study, field experiments on paddy were conducted in thirty non-weighing type lysimeters during dry seasons of 2016 and 2017. Ten plots were irrigated using continuous flooding (CF) and the rest were irrigated with AWD practice at 40mb and 75mb soil moisture stress levels. Depth of ponding and soil suction at 10, 40 and 70 cm from the soil surface were measured daily from all lysimeter plots. The measured field data were used in calibration and validation of Hydrus-1D model and simulated the water flow for both AWD and CF plots. The Hydrus-1D is being used to estimate OSMS for AWD practice and compared the seasonal irrigation water input and deep percolation losses with CF practice.

Salts in the dry valleys of Antartica

NASA Technical Reports Server (NTRS)

Gibson, E. K., Jr.; Presley, B. J.; Hatfield, J.

1984-01-01

The Dry Valleys of Antarctica are examples of polar deserts which are rare geological features on the Earth. Such deserts typically have high salinities associated with their closed-basin waters and on many surficial materials throughout them. In order to examine the possible sources for the salts observed in association with the soils in the Dry Valleys. The chloride and bromide concentrations of the water leachates from 58 soils and core samples were measured. The Cl/Br ratio for seawater is 289 and ratios measured for most of the 58 soils studied (greater than 85% of the soils studied) was larger than the seawater ratio (ratios typically were greater than 1000 and ranged up to 50,000). The enrichment in Cl relative to Br is strong evidence that the alts present within the soils were derived from seawater during ordinary evaporation processes, and not from the deposition of Cl and Br from aerosols or from rock weathering as has often been suggested.

Increasing precipitation volatility in twenty-first-century California

NASA Astrophysics Data System (ADS)

Swain, Daniel L.; Langenbrunner, Baird; Neelin, J. David; Hall, Alex

2018-05-01

Mediterranean climate regimes are particularly susceptible to rapid shifts between drought and flood—of which, California's rapid transition from record multi-year dryness between 2012 and 2016 to extreme wetness during the 2016-2017 winter provides a dramatic example. Projected future changes in such dry-to-wet events, however, remain inadequately quantified, which we investigate here using the Community Earth System Model Large Ensemble of climate model simulations. Anthropogenic forcing is found to yield large twenty-first-century increases in the frequency of wet extremes, including a more than threefold increase in sub-seasonal events comparable to California's `Great Flood of 1862'. Smaller but statistically robust increases in dry extremes are also apparent. As a consequence, a 25% to 100% increase in extreme dry-to-wet precipitation events is projected, despite only modest changes in mean precipitation. Such hydrological cycle intensification would seriously challenge California's existing water storage, conveyance and flood control infrastructure.

An analysis of soil moisture and vegetation conditions during a period of rapid subseasonal oscillations between drought and pluvials over Texas during 2015

NASA Astrophysics Data System (ADS)

Hunt, E. D.; Otkin, J.; Zhong, Y.

2017-12-01

Flash drought, characterized by the rapid onset of abnormally warm and dry weather conditions that leads to the rapid depletion of soil moisture and rapid deteriorations in vegetation health. Flash recovery, on the other hand, is characterized by a period(s) of intense precipitation where drought conditions are quickly eradicated and may be replaced by saturated soils and flooding. Both flash drought and flash recovery are closely tied to the rapid depletion or recharge of root zone soil moisture; therefore, soil moisture observations are very useful for monitoring their evolution. However, in-situ soil moisture observations tend to be concentrated over small regions and thus other methods are needed to provide a spatially continuous depiction of soil moisture conditions. One option is to use top soil moisture retrievals from the Soil Moisture Active Passive (SMAP) sensor. SMAP provides routine coverage of surface soil moisture (0-5 cm) over most of the globe, including the timespan (2015) and region of interest (Texas) that are the focus of our study. This region had an unusual sequence of flash recovery-flash drought-flash recovery during an six-month period during 2015 that provides a valuable case study of rapid transitions between extreme soil moisture conditions. During this project, SMAP soil moisture retrievals are being used in combination with in-situ soil moisture observations and assimilated into the Land Information System (LIS) to provide information about soil moisture content. LIS also provides greenness vegetation fraction data over large regions. The relationship between soil moisture and vegetation conditions and the response of the vegetation to the rapidly changing conditions are also assessed using the satellite thermal infrared based Evaporative Stress Index (ESI) that depicts anomalies in evapotranspiration, along with other vegetation datasets (leaf area index, greenness fraction) derived using MODIS observations. Preliminary results with the Noah land surface model (inside of LIS) shows that it broadly captured the soil moisture evolution during the 2015 sequence but tended to underestimate the magnitude of soil moisture anomalies. The ESI also showed negative anomalies during the drought. These and other results will be presented at the annual meeting.

Spray washing, absorbent cornstarch powder, and dry time to reduce bacterial numbers on soiled transport cage flooring

USDA-ARS?s Scientific Manuscript database

Broiler transport cages are often used repeatedly without washing and fecal matter deposited on the floor surface can transfer Campylobacter from one flock to another. Allowing feces to dry is an effective but slow and logistically impractical means to kill Campylobacter in soiled transport cages. ...

The effect of western corn rootworm (Coleoptera: Chrysomelidae) and water deficit on maize performance under controlled conditions

USDA-ARS?s Scientific Manuscript database

A series of greenhouse experiments using three infestation levels of the western corn rootworm, Diabrotica virgifera virgifera LeConte, under well-watered, moderately dry, and very dry soil moisture levels were conducted to quantify the interaction of western corn rootworm and soil water deficit on ...

Isolation of Radiation-Resistant Bacteria from Mars Analog Antarctic Dry Valleys by Preselection, and the Correlation between Radiation and Desiccation Resistance.

PubMed

Musilova, Michaela; Wright, Gary; Ward, John M; Dartnell, Lewis R

2015-12-01

Extreme radiation-resistant microorganisms can survive doses of ionizing radiation far greater than are present in the natural environment. Radiation resistance is believed to be an incidental adaptation to desiccation resistance, as both hazards cause similar cellular damage. Desert soils are, therefore, promising targets to prospect for new radiation-resistant strains. This is the first study to isolate radiation-resistant microbes by using gamma-ray exposure preselection from the extreme cold desert of the Antarctic Dry Valleys (a martian surface analogue). Halomonads, identified by 16S rRNA gene sequencing, were the most numerous survivors of the highest irradiation exposures. They were studied here for the first time for both their desiccation and irradiation survival characteristics. In addition, the association between desiccation and radiation resistance has not been investigated quantitatively before for a broad diversity of microorganisms. Thus, a meta-analysis of scientific literature was conducted to gather a larger data set. A strong correlation was found between desiccation and radiation resistance, indicating that an increase in the desiccation resistance of 5 days corresponds to an increase in the room-temperature irradiation survival of 1 kGy. Irradiation at -79°C (representative of average martian surface temperatures) increases the microbial radiation resistance 9-fold. Consequently, the survival of the cold-, desiccation-, and radiation-resistant organisms isolated here has implications for the potential habitability of dormant or cryopreserved life on Mars. Extremophiles-Halomonas sp.-Antarctica-Mars-Ionizing radiation-Cosmic rays.

Assimilating soil moisture into an Earth System Model

NASA Astrophysics Data System (ADS)

Stacke, Tobias; Hagemann, Stefan

2017-04-01

Several modelling studies reported potential impacts of soil moisture anomalies on regional climate. In particular for short prediction periods, perturbations of the soil moisture state may result in significant alteration of surface temperature in the following season. However, it is not clear yet whether or not soil moisture anomalies affect climate also on larger temporal and spatial scales. In an earlier study, we showed that soil moisture anomalies can persist for several seasons in the deeper soil layers of a land surface model. Additionally, those anomalies can influence root zone moisture, in particular during explicitly dry or wet periods. Thus, one prerequisite for predictability, namely the existence of long term memory, is evident for simulated soil moisture and might be exploited to improve climate predictions. The second prerequisite is the sensitivity of the climate system to soil moisture. In order to investigate this sensitivity for decadal simulations, we implemented a soil moisture assimilation scheme into the Max-Planck Institute for Meteorology's Earth System Model (MPI-ESM). The assimilation scheme is based on a simple nudging algorithm and updates the surface soil moisture state once per day. In our experiments, the MPI-ESM is used which includes model components for the interactive simulation of atmosphere, land and ocean. Artificial assimilation data is created from a control simulation to nudge the MPI-ESM towards predominantly dry and wet states. First analyses are focused on the impact of the assimilation on land surface variables and reveal distinct differences in the long-term mean values between wet and dry state simulations. Precipitation, evapotranspiration and runoff are larger in the wet state compared to the dry state, resulting in an increased moisture transport from the land to atmosphere and ocean. Consequently, surface temperatures are lower in the wet state simulations by more than one Kelvin. In terms of spatial pattern, the largest differences between both simulations are seen for continental areas, while regions with a maritime climate are least sensitive to soil moisture assimilation.

Enhanced degradation of isoproturon in an agricultural soil by a Sphingomonas sp. strain and a microbial consortium.

PubMed

Li, Renyi; Dörfler, Ulrike; Munch, Jean Charles; Schroll, Reiner

2017-02-01

Isoproturon (IPU) degradation in an agricultural soil inoculated with an isolated IPU-degrader strain (Sphingomonas sp. strain AK1, IS) or a microbial consortium (MC) harboring this strain, with or without carrier material, were investigated in soil microcosm experiments during 46 days. Effect of the carrier material and inoculation size on IPU-degradation efficacy of the inoculants were studied. Mineralization, extractable residues and non-extractable residues of 14 C-labeled IPU were analyzed. The low IPU mineralization in untreated soil (7.0%) was enhanced to different extents by inoculation of IS (17.4%-46.0%) or MC (58.9%-67.5%). Concentrations of IPU residues in soils amended with MC (0.002-0.095 μg g dry soil -1 ) were significantly lower than in soils amended with IS (0.02-0.67 μg g dry soil -1 ) and approximately 10 times lower than in the uninoculated soil (0.06-0.80 μg g dry soil -1 ). Less extractable residues and non-extractable residues were detected in soil with higher IPU mineralization. Inoculation size (as indicated by the volume of liquid cultures or by the number of carrier particles) determined the IPU-removal efficacy of IS in soil, but this effect was less pronounced for MC. The low sorption of IPU to soil and the decreasing IPU-mineralizing rates suggested incapability of IS to establish the IPU-mineralizing function in the soil. The thorough removal of IPU and persistent IPU-mineralizing activity of soil inoculated with MC indicated a high persistence of IPU-metabolic trait. Our results showed that microbial consortia might be more efficient than single degrader strains to enhance clean-up of organic chemicals in soil. Copyright © 2016 Elsevier Ltd. All rights reserved.

Why can postwildfire runoff and erosion vary from negligible to extreme?

NASA Astrophysics Data System (ADS)

Noske, P.; Nyman, P.; Lane, P. N. J.; Van der Sant, R.; Sheridan, G. J.

2016-12-01

Soil surface properties vary with aridity, as does runoff and erosion after wildfire. Here we draw on studies conducted in different upland eucalypt forests of Victoria Australia, to compare and contrast the hydrological effects of wildfire. The study central to this presentation was conducted in two small (0.2-0.3 ha) dry forested headwater catchments burned during the 2009 Black Saturday wildfire. Surface runoff ratios during rainfall events approached 0.45 in the first year postwildfire. High runoff ratios in these dry forests were attributed to wildfire-induced soil water repellency and inherently low hydraulic conductivity. Average annual sediment yields peaked at 10 t ha-1 during the first year before declining dramatically to background levels, suggesting high-magnitude erosion processes may become limited by sediment availability on hillslopes. Surface runoff and erosion differed substantially between the equatorial and polar-facing catchments; this was most likely due to higher rates of infiltration and surface roughness on polar-facing slopes. Data collected from a plot scale study from 5 different burned forest locations of differing aridity produced a range of runoff ratios that support the findings of the central study. Additional data from burned catchments supporting wetter forests are also presented to further illustrate the contrast in rates of runoff and recovery from a different forest type. Results show that rates of postwildfire erosion and runoff in eucalypt forests in south-east Australia are highly variable. Large differences in erosion and runoff occur with relatively small changes in aridity.

Determination of low methylmercury concentrations in peat soil samples by isotope dilution GC-ICP-MS using distillation and solvent extraction methods.

PubMed

Pietilä, Heidi; Perämäki, Paavo; Piispanen, Juha; Starr, Mike; Nieminen, Tiina; Kantola, Marjatta; Ukonmaanaho, Liisa

2015-04-01

Most often, only total mercury concentrations in soil samples are determined in environmental studies. However, the determination of extremely toxic methylmercury (MeHg) in addition to the total mercury is critical to understand the biogeochemistry of mercury in the environment. In this study, N2-assisted distillation and acidic KBr/CuSO4 solvent extraction methods were applied to isolate MeHg from wet peat soil samples collected from boreal forest catchments. Determination of MeHg was performed using a purge and trap GC-ICP-MS technique with a species-specific isotope dilution quantification. Distillation is known to be more prone to artificial MeHg formation compared to solvent extraction which may result in the erroneous MeHg results, especially with samples containing high amounts of inorganic mercury. However, methylation of inorganic mercury during the distillation step had no effect on the reliability of the final MeHg results when natural peat soil samples were distilled. MeHg concentrations determined in peat soil samples after distillation were compared to those determined after the solvent extraction method. MeHg concentrations in peat soil samples varied from 0.8 to 18 μg kg(-1) (dry weight) and the results obtained with the two different methods did not differ significantly (p=0.05). The distillation method with an isotope dilution GC-ICP-MS was shown to be a reliable method for the determination of low MeHg concentrations in unpolluted soil samples. Furthermore, the distillation method is solvent-free and less time-consuming and labor-intensive when compared to the solvent extraction method. Copyright © 2014 Elsevier Ltd. All rights reserved.

Long-Term Effects of Multiwalled Carbon Nanotubes and Graphene on Microbial Communities in Dry Soil.

PubMed

Ge, Yuan; Priester, John H; Mortimer, Monika; Chang, Chong Hyun; Ji, Zhaoxia; Schimel, Joshua P; Holden, Patricia A

2016-04-05

Little is known about the long-term effects of engineered carbonaceous nanomaterials (ECNMs) on soil microbial communities, especially when compared to possible effects of natural or industrial carbonaceous materials. To address these issues, we exposed dry grassland soil for 1 year to 1 mg g(-1) of either natural nanostructured material (biochar), industrial carbon black, three types of multiwalled carbon nanotubes (MWCNTs), or graphene. Soil microbial biomass was assessed by substrate induced respiration and by extractable DNA. Bacterial and fungal communities were examined by terminal restriction fragment length polymorphism (T-RFLP). Microbial activity was assessed by soil basal respiration. At day 0, there was no treatment effect on soil DNA or T-RFLP profiles, indicating negligible interference between the amended materials and the methods for DNA extraction, quantification, and community analysis. After a 1-year exposure, compared to the no amendment control, some treatments reduced soil DNA (e.g., biochar, all three MWCNT types, and graphene; P < 0.05) and altered bacterial communities (e.g., biochar, carbon black, narrow MWCNTs, and graphene); however, there were no significant differences across the amended treatments. These findings suggest that ECNMs may moderately affect dry soil microbial communities but that the effects are similar to those from natural and industrial carbonaceous materials, even after 1-year exposure.

Biological soil crusts exhibit a dynamic response to seasonal rain and release from grazing with implications for soil stability

USGS Publications Warehouse

Jimenez, Aguilar A.; Huber-Sannwald, E.; Belnap, J.; Smart, D.R.; Arredondo, Moreno J.T.

2009-01-01

In Northern Mexico, long-term grazing has substantially degraded semiarid landscapes. In semiarid systems, ecological and hydrological processes are strongly coupled by patchy plant distribution and biological soil crust (BSC) cover in plant-free interspaces. In this study, we asked: 1) how responsive are BSC cover/composition to a drying/wetting cycle and two-year grazing removal, and 2) what are the implications for soil erosion? We characterized BSC morphotypes and their influence on soil stability under grazed/non-grazed conditions during a dry and wet season. Light- and dark-colored cyanobacteria were dominant at the plant tussock and community level. Cover changes in these two groups differed after a rainy season and in response to grazing removal. Lichens with continuous thalli were more vulnerable to grazing than those with semi-continuous/discontinuous thalli after the dry season. Microsites around tussocks facilitated BSC colonization compared to interspaces. Lichen and cyanobacteria morphotypes differentially enhanced resistance to soil erosion; consequently, surface soil stability depends on the spatial distribution of BSC morphotypes, suggesting soil stability may be as dynamic as changes in the type of BSC cover. Longer-term spatially detailed studies are necessary to elicit spatiotemporal dynamics of BSC communities and their functional role in biotically and abiotically variable environments. ?? 2009 Elsevier Ltd.

An Evaluation of Total Solar Reflectance and Spectral Band Ratioing Techniques for Estimating Soil Water Content

NASA Technical Reports Server (NTRS)

Reginato, R. J.; Vedder, J. F.; Idso, S. B.; Jackson, R. D.; Blanchard, M. B.; Goettelman, R.

1977-01-01

For several days in March of 1975, reflected solar radiation measurements were obtained from smooth and rough surfaces of wet, drying, and continually dry Avondale loam at Phoenix, Arizona, with pyranometers located 50 cm above the ground surface and a multispectral scanner flown at a 300-m height. The simple summation of the different band radiances measured by the multispectral scanner proved equally as good as the pyranometer data for estimating surface soil water content if the multispectral scanner data were standardized with respect to the intensity of incoming solar radiation or the reflected radiance from a reference surface, such as the continually dry soil. Without this means of standardization, multispectral scanner data are most useful in a spectral band ratioing context. Our results indicated that, for the bands used, no significant information on soil water content could be obtained by band ratioing. Thus the variability in soil water content should insignificantly affect soil-type discrimination based on identification of type-specific spectral signatures. Therefore remote sensing, conducted in the 0.4- to 1.0-micron wavelength region of the solar spectrum, would seem to be much More suited to identifying crop and soil types than to estimating of soil water content.

Semiquantitative color profiling of soils over a land degradation gradient in Sakaerat, Thailand.

PubMed

Doi, Ryoichi; Wachrinrat, Chongrak; Teejuntuk, Sakhan; Sakurai, Katsutoshi; Sahunalu, Pongsak

2010-11-01

In this study, we attempted multivariate color profiling of soils over a land degradation gradient represented by dry evergreen forest (original vegetation), dry deciduous forest (moderately disturbed by fire), and bare ground (severely degraded) in Sakaerat, Thailand. The soils were sampled in a dry-to-wet seasonal transition. Values of the red-green-blue (RGB), cyan-magenta-yellow-key black (CMYK), L*a*b*, and hue-intensity-saturation (HIS) color models were determined using the digital software Adobe Photoshop. Land degradation produced significant variations (p<0.05) in R, C, Y, L*, a*, b*, S, and I values (p<0.05). The seasonal transition produced significant variations (p<0.05) in R, G, B, C, M, K, L*, b*, and I values. In discriminating the soils, the color models did not differ in discriminatory power, while discriminatory power was affected by seasonal changes. Most color variation patterns had nonlinear relationships with the intensity of the land degradation gradient, due to effects of fire that darkened the deciduous forest soil, masking the nature of the soil as the intermediate between the evergreen forest and the bare ground soils. Taking these findings into account, the utilization of color profiling of soils in land conservation and rehabilitation is discussed.

The effects of land use and its patterns on soil properties in a small catchment of the Loess Plateau.

PubMed

Wang, Jun; Fu, Bo-jie; Qiu, Yang; Chen, Li-ding

2003-03-01

Due to relatively strong human activities in the hilly area of Loess Plateau, the natural vegetation has been destroyed, and landscape pattern based on agricultural land matrix was land use mosaic composing of shrub land, grassland, woodland and orchard. This pattern has an important effect on soil moisture and soil nutrients. The Danangou catchment, a typical small catchment, was selected to study the effects of land use and its patterns on soil moisture and nutrients in this paper. The results are as follows: The comparisons of soil moisture among seven land uses for wet year and dry year were performed; (1) the average of soil moisture content for whole catchment was 12.11% in wet year, while it was 9.37% in dry year; (2) soil moisture among seven land uses significantly different in dry year, but not in wet year; (3) from wet year to dry year, the profile type of soil moisture changed from decreasing type to fluctuation-type and from fluctuant type to increasing type; (4) the increasing trend in soil moisture from the top to foot of hillslope occurred in simple land use along slope, while complicated distribution of soil moisture was observed in multiple land uses along slope. The relationship between soil nutrients and land uses and landscape positions were analysed: (1) five nutrient contents of soil organic matter (SOM), total N (TN), available N (AN), total P (TP) and available P (AP) in hilly area were lower than that in other area. SOM content was less than 1%, TN content less than 0.07%, and TP content between 0.05% and 0.06%; (2) SOM and TN contents in woodland, shrub land and grassland were significantly higher than that in fallow land and cropland, and higher level in soil fertility was found in crop-fruit intercropping land among croplands; (3) soil nutrient distribution and responses to landscape positions were variable depending on slope and the location of land use types.

[Effect of short-time drought process on denitrifying bacteria abundance and N2O emission in paddy soil].

PubMed

Lu, Jing; Liu, Jin-Bo; Sheng, Rong; Liu, Yi; Chen, An-Lei; Wei, Wen-Xue

2014-10-01

In order to investigate the impact of drying process on greenhouse gas emissions and denitrifying microorganisms in paddy soil, wetting-drying process was simulated in laboratory conditions. N2O flux, redox potential (Eh) were monitored and narG- and nosZ-containing denitrifiers abundances were determined by real-time PCR. N2O emission was significantly increased only 4 h after drying process began, and it was more than 6 times of continuous flooding (CF) at 24 h. In addition, narG and nosZ gene abundances were increased rapidly with the drying process, and N2O emission flux was significantly correlated with narG gene abundance (P < 0.01). Our results indicated that the narG-containing deniteifiers were the main driving microorganisms which caused the N2O emission in the short-time drought process in paddy soil.

Retention of stored water enables tropical tree saplings to survive extreme drought conditions.

PubMed

Wolfe, Brett T

2017-04-01

Trees generally maintain a small safety margin between the stem water potential (Ψstem) reached during seasonal droughts and the Ψstem associated with their mortality. This pattern may indicate that species face similar mortality risk during extreme droughts. However, if tree species vary in their ability to regulate Ψstem, then safety margins would poorly predict drought mortality. To explore variation among species in Ψstem regulation, I subjected potted saplings of six tropical tree species to extreme drought and compared their responses with well-watered plants and pretreatment reference plants. In the drought treatment, soil water potential reached <-10 MPa, yet three species, Bursera simaruba (L.) Sarg., Cavanillesia platanifolia (Bonpl.) Kunth and Cedrela odorata L. had 100% survival and maintained Ψstem near -1 MPa (i.e., desiccation-avoiding species). Three other species, Cojoba rufescens (Benth.) Britton and Rose, Genipa americana L. and Hymenaea courbaril L. had 50%, 0% and 25% survival, respectively, and survivors had Ψstem <-6 MPa (i.e., desiccation-susceptible species). The desiccation-avoiding species had lower relative water content (RWC) in all organs and tissues (root, stem, bark and xylem) in the drought treatment than in the reference plants (means 72.0-90.4% vs 86.9-97.9%), but the survivors of the desiccation-susceptible C. rufescens had much lower RWC in the drought treatment (44.5-72.1%). Among the reference plants, the desiccation-avoiding species had lower tissue density, leaf-mass fraction and lateral-root surface area (LRA) than the desiccation-susceptible species. Additionally, C. platanifolia and C. odorata had reduced LRA in the drought treatment, which may slow water loss into dry soil. Together, these results suggest that the ability to regulate Ψstem during extreme drought is associated with functional traits that favor retention of stored water and that safety margins during seasonal drought poorly predict survival during extreme drought. © The Author 2017. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

Multi-Sensor Mud Detection

NASA Technical Reports Server (NTRS)

Rankin, Arturo L.; Matthies, Larry H.

2010-01-01

Robust mud detection is a critical perception requirement for Unmanned Ground Vehicle (UGV) autonomous offroad navigation. A military UGV stuck in a mud body during a mission may have to be sacrificed or rescued, both of which are unattractive options. There are several characteristics of mud that may be detectable with appropriate UGV-mounted sensors. For example, mud only occurs on the ground surface, is cooler than surrounding dry soil during the daytime under nominal weather conditions, is generally darker than surrounding dry soil in visible imagery, and is highly polarized. However, none of these cues are definitive on their own. Dry soil also occurs on the ground surface, shadows, snow, ice, and water can also be cooler than surrounding dry soil, shadows are also darker than surrounding dry soil in visible imagery, and cars, water, and some vegetation are also highly polarized. Shadows, snow, ice, water, cars, and vegetation can all be disambiguated from mud by using a suite of sensors that span multiple bands in the electromagnetic spectrum. Because there are military operations when it is imperative for UGV's to operate without emitting strong, detectable electromagnetic signals, passive sensors are desirable. JPL has developed a daytime mud detection capability using multiple passive imaging sensors. Cues for mud from multiple passive imaging sensors are fused into a single mud detection image using a rule base, and the resultant mud detection is localized in a terrain map using range data generated from a stereo pair of color cameras.

Desert shrub responses to experimental modification of precipitation seasonality and soil depth: relationship to the two-layer model and ecohydrological niche

USGS Publications Warehouse

Germino, Matthew J.; Reinhardt, Keith

2013-01-01

1. Ecohydrological niches are important for understanding plant community responses to climate shifts, particularly in dry lands. According to the two-layer hypothesis, selective use of deep-soil water increases growth or persistence of woody species during warm and dry summer periods and thereby contributes to their coexistence with shallow-rooted herbs in dry ecosystems. The resource-pool hypothesis further suggests that shallow-soil water benefits growth of all plants while deep-soil water primarily enhances physiological maintenance and survival of woody species. Few studies have directly tested these by manipulating deep-soil water availability and observing the long-term outcomes. 2. We predicted that factors promoting infiltration and storage of water in deep soils, specifically greater winter precipitation and soil depth, would enhance Artemisia tridentata (big sagebrush) in cold, winter-wet/summer-dry desert. Sagebrush responses to 20 years of winter irrigation were compared to summer- or no irrigation, on plots having relatively deep or shallow soils (2 m vs. 1 m depths). 3. Winter irrigation increased sagebrush cover, and crown and canopy volumes, but not density (individuals/plot) compared to summer or no irrigation, on deep-soil plots. On shallow-soil plots, winter irrigation surprisingly decreased shrub cover and size, and summer irrigation had no effect. Furthermore, multiple regression suggested that the variations in growth were related (i) firstly to water in shallow soils (0-0.2 m) and secondly to deeper soils (> 1 m deep) and (ii) more by springtime than by midsummer soil water. Water-use efficiency increased considerably on shallow soils without irrigation and was lowest with winter irrigation. 4. Synthesis. Sagebrush was more responsive to the seasonal timing of precipitation than to total annual precipitation. Factors that enhanced deep-water storage (deeper soils plus more winter precipitation) led to increases in Artemisia tridentata that were consistent with the two-layer hypothesis, and the contribution of shallow water to growth on these plots was consistent with the resource-pool hypothesis. However, shallow-soil water also had negative effects on sagebrush, suggesting an ecohydrological trade-off not considered in these or related theories. The interaction between precipitation timing and soil depth indicates that increased winter precipitation could lead to a mosaic of increases and decreases in A. tridentata across landscapes having variable soil depth.

Provisioning of bioavailable carbon between the wet and dry phases in a semi-arid floodplain.

PubMed

Baldwin, Darren S; Rees, Gavin N; Wilson, Jessica S; Colloff, Matthew J; Whitworth, Kerry L; Pitman, Tara L; Wallace, Todd A

2013-06-01

Ecosystem functioning on arid and semi-arid floodplains may be described by two alternate traditional paradigms. The pulse-reserve model suggests that rainfall is the main driver of plant growth and subsequent carbon and energy reserve formation in the soil of arid and semi-arid regions. The flood pulse concept suggests that periodic flooding facilitates the two-way transfer of materials between a river and its adjacent floodplain, but focuses mainly on the period when the floodplain is inundated. We compared the effects of both rainfall and flooding on soil moisture and carbon in a semi-arid floodplain to determine the relative importance of each for soil moisture recharge and the generation of a bioavailable organic carbon reserve that can potentially be utilised during the dry phase. Flooding, not rainfall, made a substantial contribution to moisture in the soil profile. Furthermore, the growth of aquatic macrophytes during the wet phase produced at least an order of magnitude more organic material than rainfall-induced pulse-reserve responses during the dry phase, and remained as recognizable soil carbon for years following flood recession. These observations have led us to extend existing paradigms to encompass the reciprocal provisioning of carbon between the wet and dry phases on the floodplain, whereby, in addition to carbon fixed during the dry phase being important for driving biogeochemical transformations upon return of the next wet phase, aquatic macrophyte carbon fixed during the wet phase is recognized as an important source of energy for the dry phase. Reciprocal provisioning presents a conceptual framework on which to formulate questions about the resistance and ecosystem resilience of arid and semi-arid floodplains in the face of threats like climate change and alterations to flood regimes.

Shift from ecosystem P to N limitation at precipitation gradient in tropical dry forests at Yucatan, Mexico

NASA Astrophysics Data System (ADS)

Campo, Julio

2016-09-01

The effect of precipitation regime on N and P cycles in tropical forests is poorly understood, despite global climate models project total precipitation reductions during the 21st Century. I investigated the influence of variation in annual precipitation (1240-642 mm yr-1) on N and P intra-system cycling along a precipitation regime gradient at Yucatan including 12 mature, tropical dry forests (TDFs) growing under otherwise similar conditions (similar annual temperature, rainfall seasonality and geological substrate). I analyzed N and P storage and turnover in the forest floor and mineral soil and explored the dependence of these processes and pools on precipitation level. The study findings indicate that with decreasing precipitation the litterfall decreases slightly (10%), while nutrient use efficiency increases by 20% for N, and by 40% for P. Decomposition rate and nutrient release was smallest in the dry extremity of precipitation regime. The difference between N and P turnover times in the forest floor and in organic matter indicates that different nutrients control the ecosystem function across the precipitation gradient. The data from this study reveals a pattern of limitation shifting from P towards N with decreasing annual precipitation. I suggest that the long-term consequences of the expected decrease in precipitation in many tropical dry regions would changes N and P supply could have long-term negative effects on primary productivity and future carbon storage in TDFs.

Copper removal from contaminated soils by soil washing process using camellian-derived saponin

NASA Astrophysics Data System (ADS)

Reyes, Arturo; Fernanda Campos, Maria; Videla, Álvaro; Letelier, María Victoria; Fuentes, Bárbara

2015-04-01

Antofagasta Region in North of Chile has been the main copper producer district in the world. As a consequence of a lack of mining closure regulation, a large number of abandon small-to-medium size metal-contaminated sites have been identified in the last survey performed by the Chilean Government. Therefore, more research development on sustainable reclamation technologies must be made in this extreme arid-dry zone. The objective of this study is to test the effectiveness of soil remediation by washing contaminated soil using camellian-derived saponin for the mobilization of copper. Soil samples were taken from an abandoned copper mine site located at 30 km North Antofagasta city. They were dried and sieved at 75 µm for physico-chemical characterization. A commercial saponin extracted from camellias seed was used as biosurfactant. The soil used contains 67.4 % sand, 26.3 % silt and 6.3 % clay. The soil is highly saline (electric conductivity, 61 mScm-1), with low organic matter content (0.41%), with pH 7.30, and a high copper concentration (2200 mg Kg-1 soil). According to the sequential extraction procedure of the whole soil, copper species are mainly as exchangeable fraction (608.2 mg Kg-1 soil) and reducible fraction (787.3 mg Kg-1 soil), whereas the oxidizable and residual fractions are around 205.7 and 598.8 mg Kg-1 soil, respectively. Soil particles under 75 µm contain higher copper concentrations (1242 mg Kg-1 soil) than the particle fraction over 75 µm (912 mg Kg-1 soil). All washing assays were conducted in triplicate using a standard batch technique with and without pH adjustment. The testing protocols includes evaluation of four solid to liquid ratio (0.5:50; 1.0:50; 2.0:50, and 5.0:50) and three saponin concentrations (0, 1, and 4 mg L-1). After shaking (24 h, 20±1 °C) and subsequently filtration (0.45 µm), the supernatants were analyzed for copper and pH. The removal efficiencies of copper by saponin solutions were calculated in according to the concentrations of copper in aqueous solution and its initial concentration on contaminated soil. It was found along this study that the washing of soils reaches a maximum performance when a 0.5:50 ratio soil:water, and 4 mg L-1 of saponin solution were used, in comparison with any other ratios and saponin dosage evaluated. Moreover, when saponin solution (4 mg L-1) was adjusted at pH 4.0, the efficiency of copper removal increased more than three times (98.3 mg Kg-1 soil) in comparison with the washing without pH adjustment (27.7 mg Kg-1 soil soil). Copper removal was found to be dependent on saponin concentration. The carboxyl group of the saponin hydrophilic head molecule could form copper-aquo complexes, which contribute to the mobilization of copper. However, a low pH is also necessary to solubilize and release copper from soil allowing interaction with saponin. It can be concluded that the use of saponin for washing soils containing copper is a cost-effective and environmental friendly alternative for cleaning and remediation of contaminated soils in the Antofagasta Region.

Toxicity of four veterinary pharmaceuticals on the survival and reproduction of Folsomia candida in tropical soils.

PubMed

Zortéa, Talyta; Segat, Julia C; Maccari, Ana Paula; Sousa, José Paulo; Da Silva, Aleksandro S; Baretta, Dilmar

2017-04-01

This study aimed to evaluate the effect of veterinary pharmaceuticals (VPs) used to control endo- and ectoparasites in ruminants, on the survival and reproduction of the collembolan species Folsomia candida. Standard ecotoxicological tests were conducted in Tropical Artificial Soil and the treatments consisted of increasing dosages of four commercial products with different active ingredients: ivermectin, fipronil, fluazuron and closantel. Ecotoxicological effects were related to the class and mode of action of the different compounds. Fipronil and ivermectin were the most toxic compounds causing a significant reduction in the number of juveniles at the lowest doses tested (LOEC reprod values of 0.3 and 0.2 mg kg -1 of dry soil, respectively) and similar low EC 50 values (fipronil: 0.19 mg kg -1 dry soil, CL 95% 0.16-0.22; ivermectin: 0.43 mg kg -1 dry soil, CL 95% 0.09-0.77), although the effects observed in the former compound were possibly related to a low adult survival (LC 50 of 0.62 mg kg -1 dry soil; CL 95% : 0.25-1.06). For the latter compound no significant lethal effects were observed. Fluazuron caused an intermediate toxicity (EC 50 of 3.07 mg kg -1 dry soil, CL 95% : 2.26-3.87), and also here a decrease in adult survival could explain the effects observed at reproduction. Closantel, despite showing a significant reduction on the number of juveniles produced, no dose-response relationship nor effects higher than 50% were observed. Overall, all tested compounds, especially ivermectin, when present in soil even at sub-lethal concentrations, can impair the reproduction of collembolans and possibly other arthropods. However, the actual risk to arthropod communities should be further investigated performing tests under a more realistic exposure (e.g., by testing the dung itself as the contaminated matrix) and by deriving ecotoxicologically relevant exposure concentration in soil derived from the presence of cattle dung. Copyright © 2017 Elsevier Ltd. All rights reserved.

Contribution of Soil Fauna to Foliar Litter-Mass Loss in Winter in an Ecotone between Dry Valley and Montane Forest in the Upper Reaches of the Minjiang River.

PubMed

Peng, Yan; Yang, Wanqin; Li, Jun; Wang, Bin; Zhang, Chuan; Yue, Kai; Wu, Fuzhong

2015-01-01

Litter decomposition during winter can provide essential nutrients for plant growth in the subsequent growing season, which plays important role in preventing the expansion of dry areas and maintaining the stability of ecotone ecosystems. However, limited information is currently available on the contributions of soil fauna to litter decomposition during winter in such ecosystems. Therefore, a field experiment that included litterbags with two different mesh sizes (0.04 mm and 3 mm) was conducted to investigate the contribution of soil fauna to the loss of foliar litter mass in winter from November 2013 to April 2014 along the upper reaches of the Minjiang River. Two litter types of the dominant species were selected in each ecosystem: cypress (Cupressus chengiana) and oak (Quercus baronii) in ecotone; cypress (Cupressus chengiana) and clovershrub (Campylotropis macrocarpa) in dry valley; and fir (Abies faxoniana) and birch (Betula albosinensis) in montane forest. Over one winter incubation, foliar litter lost 6.0%-16.1%, 11.4%-26.0%, and 6.4%-8.5% of initial mass in the ecotone, dry valley and montane forest, respectively. Soil fauna showed obvious contributions to the loss of foliar litter mass in all of the ecosystems. The highest contribution (48.5%-56.8%) was observed in the ecotone, and the lowest contribution (0.4%-25.8%) was observed in the montane forest. Compared with other winter periods, thawing period exhibited higher soil fauna contributions to litter mass loss in ecotone and dry valley, but both thawing period and freezing period displayed higher soil fauna contributions in montane forest. Statistical analysis demonstrated that the contribution of soil fauna was significantly correlated with temperature and soil moisture during the winter-long incubation. These results suggest that temperature might be the primary control factor in foliar litter decomposition, but more active soil fauna in the ecotone could contribute more in litter decomposition and its related ecological processes in this region.

Contribution of Soil Fauna to Foliar Litter-Mass Loss in Winter in an Ecotone between Dry Valley and Montane Forest in the Upper Reaches of the Minjiang River

PubMed Central

Peng, Yan; Yang, Wanqin; Li, Jun; Wang, Bin; Zhang, Chuan; Yue, Kai; Wu, Fuzhong

2015-01-01

Litter decomposition during winter can provide essential nutrients for plant growth in the subsequent growing season, which plays important role in preventing the expansion of dry areas and maintaining the stability of ecotone ecosystems. However, limited information is currently available on the contributions of soil fauna to litter decomposition during winter in such ecosystems. Therefore, a field experiment that included litterbags with two different mesh sizes (0.04 mm and 3 mm) was conducted to investigate the contribution of soil fauna to the loss of foliar litter mass in winter from November 2013 to April 2014 along the upper reaches of the Minjiang River. Two litter types of the dominant species were selected in each ecosystem: cypress (Cupressus chengiana) and oak (Quercus baronii) in ecotone; cypress (Cupressus chengiana) and clovershrub (Campylotropis macrocarpa) in dry valley; and fir (Abies faxoniana) and birch (Betula albosinensis) in montane forest. Over one winter incubation, foliar litter lost 6.0%-16.1%, 11.4%-26.0%, and 6.4%-8.5% of initial mass in the ecotone, dry valley and montane forest, respectively. Soil fauna showed obvious contributions to the loss of foliar litter mass in all of the ecosystems. The highest contribution (48.5%-56.8%) was observed in the ecotone, and the lowest contribution (0.4%-25.8%) was observed in the montane forest. Compared with other winter periods, thawing period exhibited higher soil fauna contributions to litter mass loss in ecotone and dry valley, but both thawing period and freezing period displayed higher soil fauna contributions in montane forest. Statistical analysis demonstrated that the contribution of soil fauna was significantly correlated with temperature and soil moisture during the winter-long incubation. These results suggest that temperature might be the primary control factor in foliar litter decomposition, but more active soil fauna in the ecotone could contribute more in litter decomposition and its related ecological processes in this region. PMID:25901894

Growth and Chemical Responses to CO2 Enrichment Virginia Pine (Pinus Virginiana Mill.) (NDP-009)

DOE Data Explorer

Luxmoore, R. J. [Oak Ridge National Laboratory (ORNL), Oak Ridge, TN (USA); Norby, R. J. [Oak Ridge National Laboratory (ORNL), Oak Ridge, TN (USA); O'Neill, E. G. [Oak Ridge National Laboratory (ORNL), Oak Ridge, TN (USA); Weller, D. G. [Oak Ridge National Laboratory (ORNL), Oak Ridge, TN (USA); Ells, J. M. [Agricultural Research Service, USDA; North Carolina State University, Raleigh, NC (USA); Rogers, H. H. [Agricultural Research Service, USDA; North Carolina State University, Raleigh, NC (USA)

1985-01-01

From June 28 to October 29 in 1982, Virginia pine seedlings were exposed to elevated CO2 levels in open-top growth chambers at one of four concentrations (75, 150, 300, and 600 ppm above ambient). Plant dry weight; height; stem diameter; and chemical contents of leaf, stem, and root tissues were measured before and after exposure. Soil variables were also characterized. These data illustrate the short-term physical and chemical response of Virginia pine seedlings to elevated levels of CO2. The data are in seven files: initial dry weights before exposure (844 kB), dry weights after exposure (4 kB), major nutrient concentrations after final harvest (12 kB), minor nutrient concentrations after final harvest (17 kB), soil nutrient concentrations after final harvest (4 kB), soil leachate elements after final harvest (5 kB), and soil leachate solutes after final harvest (4 kB).

Ailanthus Altissima and Phragmites Australis for chromium removal from a contaminated soil.

PubMed

Ranieri, Ezio; Fratino, Umberto; Petrella, Andrea; Torretta, Vincenzo; Rada, Elena Cristina

2016-08-01

The comparative effectiveness for hexavalent chromium removal from irrigation water, using two selected plant species (Phragmites australis and Ailanthus altissima) planted in soil contaminated with hexavalent chromium, has been studied in the present work. Total chromium removal from water was ranging from 55 % (Phragmites) to 61 % (Ailanthus). After 360 days, the contaminated soil dropped from 70 (initial) to 36 and 41 mg Cr/kg (dry soil), for Phragmites and Ailanthus, respectively. Phragmites accumulated the highest amount of chromium in the roots (1910 mg Cr/kg(dry tissue)), compared with 358 mg Cr/kg(dry tissue) for Ailanthus roots. Most of chromium was found in trivalent form in all plant tissues. Ailanthus had the lowest affinity for Cr(VI) reduction in the root tissues. Phragmites indicated the highest chromium translocation potential, from roots to stems. Both plant species showed good potentialities to be used in phytoremediation installations for chromium removal.

The impact of non-isothermal soil moisture transport on evaporation fluxes in a maize cropland

NASA Astrophysics Data System (ADS)

Shao, Wei; Coenders-Gerrits, Miriam; Judge, Jasmeet; Zeng, Yijian; Su, Ye

2018-06-01

The process of evaporation interacts with the soil, which has various comprehensive mechanisms. Multiphase flow models solve air, vapour, water, and heat transport equations to simulate non-isothermal soil moisture transport of both liquid water and vapor flow, but are only applied in non-vegetated soils. For (sparsely) vegetated soils often energy balance models are used, however these lack the detailed information on non-isothermal soil moisture transport. In this study we coupled a multiphase flow model with a two-layer energy balance model to study the impact of non-isothermal soil moisture transport on evaporation fluxes (i.e., interception, transpiration, and soil evaporation) for vegetated soils. The proposed model was implemented at an experimental agricultural site in Florida, US, covering an entire maize-growing season (67 days). As the crops grew, transpiration and interception became gradually dominated, while the fraction of soil evaporation dropped from 100% to less than 20%. The mechanisms of soil evaporation vary depending on the soil moisture content. After precipitation the soil moisture content increased, exfiltration of the liquid water flow could transport sufficient water to sustain evaporation from soil, and the soil vapor transport was not significant. However, after a sufficient dry-down period, the soil moisture content significantly reduced, and the soil vapour flow significantly contributed to the upward moisture transport in topmost soil. A sensitivity analysis found that the simulations of moisture content and temperature at the soil surface varied substantially when including the advective (i.e., advection and mechanical dispersion) vapour transport in simulation, including the mechanism of advective vapour transport decreased soil evaporation rate under wet condition, while vice versa under dry condition. The results showed that the formulation of advective soil vapor transport in a soil-vegetation-atmosphere transfer continuum can affect the simulated evaporation fluxes, especially under dry condition.

State-Space Estimation of Soil Organic Carbon Stock

NASA Astrophysics Data System (ADS)

Ogunwole, Joshua O.; Timm, Luis C.; Obidike-Ugwu, Evelyn O.; Gabriels, Donald M.

2014-04-01

Understanding soil spatial variability and identifying soil parameters most determinant to soil organic carbon stock is pivotal to precision in ecological modelling, prediction, estimation and management of soil within a landscape. This study investigates and describes field soil variability and its structural pattern for agricultural management decisions. The main aim was to relate variation in soil organic carbon stock to soil properties and to estimate soil organic carbon stock from the soil properties. A transect sampling of 100 points at 3 m intervals was carried out. Soils were sampled and analyzed for soil organic carbon and other selected soil properties along with determination of dry aggregate and water-stable aggregate fractions. Principal component analysis, geostatistics, and state-space analysis were conducted on the analyzed soil properties. The first three principal components explained 53.2% of the total variation; Principal Component 1 was dominated by soil exchange complex and dry sieved macroaggregates clusters. Exponential semivariogram model described the structure of soil organic carbon stock with a strong dependence indicating that soil organic carbon values were correlated up to 10.8m.Neighbouring values of soil organic carbon stock, all waterstable aggregate fractions, and dithionite and pyrophosphate iron gave reliable estimate of soil organic carbon stock by state-space.