NSRD-15:Computational Capability to Substantiate DOE-HDBK-3010 Data

DOE Office of Scientific and Technical Information (OSTI.GOV)

Louie, David; Bignell, John; Dingreville, Remi Philippe Michel

Safety basis analysts throughout the U.S. Department of Energy (DOE) complex rely heavily on the information provided in the DOE Handbook, DOE-HDBK-3010, Airborne Release Fractions/Rates and Respirable Fractions for Nonreactor Nuclear Facilities, to determine radionuclide source terms from postulated accident scenarios. In calculating source terms, analysts tend to use the DOE Handbook’s bounding values on airborne release fractions (ARFs) and respirable fractions (RFs) for various categories of insults (representing potential accident release categories). This is typically due to both time constraints and the avoidance of regulatory critique. Unfortunately, these bounding ARFs/RFs represent extremely conservative values. Moreover, they were derived frommore » very limited small-scale bench/laboratory experiments and/or from engineered judgment. Thus, the basis for the data may not be representative of the actual unique accident conditions and configurations being evaluated. The goal of this research is to develop a more accurate and defensible method to determine bounding values for the DOE Handbook using state-of-art multi-physics-based computer codes.« less

Atomic rate coefficients in a degenerate plasma

NASA Astrophysics Data System (ADS)

Aslanyan, Valentin; Tallents, Greg

2015-11-01

The electrons in a dense, degenerate plasma follow Fermi-Dirac statistics, which deviate significantly in this regime from the usual Maxwell-Boltzmann approach used by many models. We present methods to calculate the atomic rate coefficients for the Fermi-Dirac distribution and present a comparison of the ionization fraction of carbon calculated using both models. We have found that for densities close to solid, although the discrepancy is small for LTE conditions, there is a large divergence from the ionization fraction by using classical rate coefficients in the presence of strong photoionizing radiation. We have found that using these modified rates and the degenerate heat capacity may affect the time evolution of a plasma subject to extreme ultraviolet and x-ray radiation such as produced in free electron laser irradiation of solid targets.

Minimizing metastatic risk in radiotherapy fractionation schedules

NASA Astrophysics Data System (ADS)

Badri, Hamidreza; Ramakrishnan, Jagdish; Leder, Kevin

2015-11-01

Metastasis is the process by which cells from a primary tumor disperse and form new tumors at distant anatomical locations. The treatment and prevention of metastatic cancer remains an extremely challenging problem. This work introduces a novel biologically motivated objective function to the radiation optimization community that takes into account metastatic risk instead of the status of the primary tumor. In this work, we consider the problem of developing fractionated irradiation schedules that minimize production of metastatic cancer cells while keeping normal tissue damage below an acceptable level. A dynamic programming framework is utilized to determine the optimal fractionation scheme. We evaluated our approach on a breast cancer case using the heart and the lung as organs-at-risk (OAR). For small tumor α /β values, hypo-fractionated schedules were optimal, which is consistent with standard models. However, for relatively larger α /β values, we found the type of schedule depended on various parameters such as the time when metastatic risk was evaluated, the α /β values of the OARs, and the normal tissue sparing factors. Interestingly, in contrast to standard models, hypo-fractionated and semi-hypo-fractionated schedules (large initial doses with doses tapering off with time) were suggested even with large tumor α/β values. Numerical results indicate the potential for significant reduction in metastatic risk.

Retainment of r-process material in dwarf galaxies

NASA Astrophysics Data System (ADS)

Beniamini, Paz; Dvorkin, Irina; Silk, Joe

2018-04-01

The synthesis of r-process elements is known to involve extremely energetic explosions. At the same time, recent observations find significant r-process enrichment even in extremely small ultra-faint dwarf (UFD) galaxies. This raises the question of retainment of those elements within their hosts. We estimate the retainment fraction and find that it is large ˜0.9, unless the r-process event is very energetic (≳ 1052erg) and / or the host has lost a large fraction of its gas prior to the event. We estimate the r-process mass per event and rate as implied by abundances in UFDs, taking into account imperfect retainment and different models of UFD evolution. The results are consistent with previous estimates (Beniamini et al. 2016b) and with the constraints from the recently detected macronova accompanying a neutron star merger (GW170817). We also estimate the distribution of abundances predicted by these models. We find that ˜0.07 of UFDs should have r-process enrichment. The results are consistent with both the mean values and the fluctuations of [Eu/Fe] in galactic metal poor stars, supporting the possibility that UFDs are the main 'building blocks' of the galactic halo population.

How does public opinion become extreme?

NASA Astrophysics Data System (ADS)

Ramos, Marlon; Shao, Jia; Reis, Saulo D. S.; Anteneodo, Celia; Andrade, José S.; Havlin, Shlomo; Makse, Hernán A.

2015-05-01

We investigate the emergence of extreme opinion trends in society by employing statistical physics modeling and analysis on polls that inquire about a wide range of issues such as religion, economics, politics, abortion, extramarital sex, books, movies, and electoral vote. The surveys lay out a clear indicator of the rise of extreme views. The precursor is a nonlinear relation between the fraction of individuals holding a certain extreme view and the fraction of individuals that includes also moderates, e.g., in politics, those who are “very conservative” versus “moderate to very conservative” ones. We propose an activation model of opinion dynamics with interaction rules based on the existence of individual “stubbornness” that mimics empirical observations. According to our modeling, the onset of nonlinearity can be associated to an abrupt bootstrap-percolation transition with cascades of extreme views through society. Therefore, it represents an early-warning signal to forecast the transition from moderate to extreme views. Moreover, by means of a phase diagram we can classify societies according to the percolative regime they belong to, in terms of critical fractions of extremists and people’s ties.

How does public opinion become extreme?

PubMed Central

Ramos, Marlon; Shao, Jia; Reis, Saulo D. S.; Anteneodo, Celia; Andrade, José S.; Havlin, Shlomo; Makse, Hernán A.

2015-01-01

We investigate the emergence of extreme opinion trends in society by employing statistical physics modeling and analysis on polls that inquire about a wide range of issues such as religion, economics, politics, abortion, extramarital sex, books, movies, and electoral vote. The surveys lay out a clear indicator of the rise of extreme views. The precursor is a nonlinear relation between the fraction of individuals holding a certain extreme view and the fraction of individuals that includes also moderates, e.g., in politics, those who are “very conservative” versus “moderate to very conservative” ones. We propose an activation model of opinion dynamics with interaction rules based on the existence of individual “stubbornness” that mimics empirical observations. According to our modeling, the onset of nonlinearity can be associated to an abrupt bootstrap-percolation transition with cascades of extreme views through society. Therefore, it represents an early-warning signal to forecast the transition from moderate to extreme views. Moreover, by means of a phase diagram we can classify societies according to the percolative regime they belong to, in terms of critical fractions of extremists and people’s ties. PMID:25989484

How does public opinion become extreme?

PubMed

Ramos, Marlon; Shao, Jia; Reis, Saulo D S; Anteneodo, Celia; Andrade, José S; Havlin, Shlomo; Makse, Hernán A

2015-05-19

We investigate the emergence of extreme opinion trends in society by employing statistical physics modeling and analysis on polls that inquire about a wide range of issues such as religion, economics, politics, abortion, extramarital sex, books, movies, and electoral vote. The surveys lay out a clear indicator of the rise of extreme views. The precursor is a nonlinear relation between the fraction of individuals holding a certain extreme view and the fraction of individuals that includes also moderates, e.g., in politics, those who are "very conservative" versus "moderate to very conservative" ones. We propose an activation model of opinion dynamics with interaction rules based on the existence of individual "stubbornness" that mimics empirical observations. According to our modeling, the onset of nonlinearity can be associated to an abrupt bootstrap-percolation transition with cascades of extreme views through society. Therefore, it represents an early-warning signal to forecast the transition from moderate to extreme views. Moreover, by means of a phase diagram we can classify societies according to the percolative regime they belong to, in terms of critical fractions of extremists and people's ties.

Cerebral Small Vessel Disease Burden Is Associated with Motor Performance of Lower and Upper Extremities in Community-Dwelling Populations

PubMed Central

Su, Ning; Zhai, Fei-Fei; Zhou, Li-Xin; Ni, Jun; Yao, Ming; Li, Ming-Li; Jin, Zheng-Yu; Gong, Gao-Lang; Zhang, Shu-Yang; Cui, Li-Ying; Tian, Feng; Zhu, Yi-Cheng

2017-01-01

Objective: To investigate the correlation between cerebral small vessel disease (CSVD) burden and motor performance of lower and upper extremities in community-dwelling populations. Methods: We performed a cross-sectional analysis on 770 participants enrolled in the Shunyi study, which is a population-based cohort study. CSVD burden, including white matter hyperintensities (WMH), lacunes, cerebral microbleeds (CMBs), perivascular spaces (PVS), and brain atrophy were measured using 3T magnetic resonance imaging. All participants underwent quantitative motor assessment of lower and upper extremities, which included 3-m walking speed, 5-repeat chair-stand time, 10-repeat pronation–supination time, and 10-repeat finger-tapping time. Data on demographic characteristics, vascular risk factors, and cognitive functions were collected. General linear model analysis was performed to identify potential correlations between motor performance measures and imaging markers of CSVD after controlling for confounding factors. Results: For motor performance of the lower extremities, WMH was negatively associated with gait speed (standardized β = -0.092, p = 0.022) and positively associated with chair-stand time (standardized β = 0.153, p < 0.0001, surviving FDR correction). For motor performance of the upper extremities, pronation–supination time was positively associated with WMH (standardized β = 0.155, p < 0.0001, surviving FDR correction) and negatively with brain parenchymal fraction (BPF; standardized β = -0.125, p = 0.011, surviving FDR correction). Only BPF was found to be negatively associated with finger-tapping time (standardized β = -0.123, p = 0.012). However, lacunes, CMBs, or PVS were not found to be associated with motor performance of lower or upper extremities in multivariable analysis. Conclusion: Our findings suggest that cerebral microstructural changes related to CSVD may affect motor performance of both lower and upper extremities. WMH and brain atrophy are most strongly associated with motor function deterioration in community-dwelling populations. PMID:29021757

Cerebral Small Vessel Disease Burden Is Associated with Motor Performance of Lower and Upper Extremities in Community-Dwelling Populations.

PubMed

Su, Ning; Zhai, Fei-Fei; Zhou, Li-Xin; Ni, Jun; Yao, Ming; Li, Ming-Li; Jin, Zheng-Yu; Gong, Gao-Lang; Zhang, Shu-Yang; Cui, Li-Ying; Tian, Feng; Zhu, Yi-Cheng

2017-01-01

Objective: To investigate the correlation between cerebral small vessel disease (CSVD) burden and motor performance of lower and upper extremities in community-dwelling populations. Methods: We performed a cross-sectional analysis on 770 participants enrolled in the Shunyi study, which is a population-based cohort study. CSVD burden, including white matter hyperintensities (WMH), lacunes, cerebral microbleeds (CMBs), perivascular spaces (PVS), and brain atrophy were measured using 3T magnetic resonance imaging. All participants underwent quantitative motor assessment of lower and upper extremities, which included 3-m walking speed, 5-repeat chair-stand time, 10-repeat pronation-supination time, and 10-repeat finger-tapping time. Data on demographic characteristics, vascular risk factors, and cognitive functions were collected. General linear model analysis was performed to identify potential correlations between motor performance measures and imaging markers of CSVD after controlling for confounding factors. Results: For motor performance of the lower extremities, WMH was negatively associated with gait speed (standardized β = -0.092, p = 0.022) and positively associated with chair-stand time (standardized β = 0.153, p < 0.0001, surviving FDR correction). For motor performance of the upper extremities, pronation-supination time was positively associated with WMH (standardized β = 0.155, p < 0.0001, surviving FDR correction) and negatively with brain parenchymal fraction (BPF; standardized β = -0.125, p = 0.011, surviving FDR correction). Only BPF was found to be negatively associated with finger-tapping time (standardized β = -0.123, p = 0.012). However, lacunes, CMBs, or PVS were not found to be associated with motor performance of lower or upper extremities in multivariable analysis. Conclusion: Our findings suggest that cerebral microstructural changes related to CSVD may affect motor performance of both lower and upper extremities. WMH and brain atrophy are most strongly associated with motor function deterioration in community-dwelling populations.

THE ORIGIN OF LOW [α/Fe] RATIOS IN EXTREMELY METAL-POOR STARS

DOE Office of Scientific and Technical Information (OSTI.GOV)

Kobayashi, Chiaki; Ishigaki, Miho N.; Tominaga, Nozomu

2014-04-10

We show that the low ratios of α elements (Mg, Si, and Ca) to Fe recently found for a small fraction of extremely metal-poor stars can be naturally explained with the nucleosynthesis yields of core-collapse supernovae, i.e., 13-25 M {sub ☉} supernovae, or hypernovae. For the case without carbon enhancement, the ejected iron mass is normal, consistent with observed light curves and spectra of nearby supernovae. On the other hand, the carbon enhancement requires much smaller iron production, and the low [α/Fe] of carbon-enhanced metal-poor stars can also be reproduced with 13-25 M {sub ☉} faint supernovae or faint hypernovae.more » Iron-peak element abundances, in particular Zn abundances, are important to put further constraints on the enrichment sources from galactic archaeology surveys.« less

Maximum Rate of Growth of Enstrophy in Solutions of the Fractional Burgers Equation

NASA Astrophysics Data System (ADS)

Yun, Dongfang; Protas, Bartosz

2018-02-01

This investigation is a part of a research program aiming to characterize the extreme behavior possible in hydrodynamic models by analyzing the maximum growth of certain fundamental quantities. We consider here the rate of growth of the classical and fractional enstrophy in the fractional Burgers equation in the subcritical and supercritical regimes. Since solutions to this equation exhibit, respectively, globally well-posed behavior and finite-time blowup in these two regimes, this makes it a useful model to study the maximum instantaneous growth of enstrophy possible in these two distinct situations. First, we obtain estimates on the rates of growth and then show that these estimates are sharp up to numerical prefactors. This is done by numerically solving suitably defined constrained maximization problems and then demonstrating that for different values of the fractional dissipation exponent the obtained maximizers saturate the upper bounds in the estimates as the enstrophy increases. We conclude that the power-law dependence of the enstrophy rate of growth on the fractional dissipation exponent has the same global form in the subcritical, critical and parts of the supercritical regime. This indicates that the maximum enstrophy rate of growth changes smoothly as global well-posedness is lost when the fractional dissipation exponent attains supercritical values. In addition, nontrivial behavior is revealed for the maximum rate of growth of the fractional enstrophy obtained for small values of the fractional dissipation exponents. We also characterize the structure of the maximizers in different cases.

Temporal pattern and memory in sediment transport in an experimental step-pool channel

NASA Astrophysics Data System (ADS)

Saletti, Matteo; Molnar, Peter; Zimmermann, André; Hassan, Marwan A.; Church, Michael; Burlando, Paolo

2015-04-01

In this work we study the complex dynamics of sediment transport and bed morphology in steep streams, using a dataset of experiments performed in a steep flume with natural sediment. High-resolution (1 sec) time series of sediment transport were measured for individual size classes at the outlet of the flume for different combinations of sediment input rates, discharges, and flume slopes. The data show that the relation between instantaneous discharge and sediment transport exhibits large variability on different levels. After dividing the time series into segments of constant water discharge, we quantify the statistical properties of transport rates by fitting the data with a Generalized Extreme Value distribution, whose 3 parameters are related to the average sediment flux. We analyze separately extreme events of transport rate in terms of their fractional composition; if only events of high magnitude are considered, coarse grains become the predominant component of the total sediment yield. We quantify the memory in grain size dependent sediment transport with variance scaling and autocorrelation analyses; more specifically, we study how the variance changes with different aggregation scales and how the autocorrelation coefficient changes with different time lags. Our results show that there is a tendency to an infinite memory regime in transport rate signals, which is limited by the intermittency of the largest fractions. Moreover, the structure of memory is both grain size-dependent and magnitude-dependent: temporal autocorrelation is stronger for small grain size fractions and when the average sediment transport rate is large. The short-term memory in coarse grain transport increases with temporal aggregation and this reveals the importance of the sampling frequency of bedload transport rates in natural streams, especially for large fractions.

Small-angle X-ray scattering and rheological characterization of alginate gels. 2. Time-resolved studies on ionotropic gels

NASA Astrophysics Data System (ADS)

Yuguchi, Y.; Urakawa, H.; Kajiwara, K.; Draget, K. I.; Stokke, B. T.

2000-10-01

Gelation was observed by time-resolved small-angle X-ray scattering and rheology on 10 mg/ml Ca-alginate gels prepared by in situ release of Ca 2+ from CaEGTA or CaCO 3 with total Ca 2+ concentration in the range 10-20 mM. This was carried out for alginates having a fraction of α- L-GulA (G) of FG=0.39 and 0.68, respectively, obtained by the selection of alginates isolated from two different brown algae, Ascophyllum nodosum and Laminaria hyperborea stipe. Correlation between the rheological data and SAXS data shows that a large fraction of the lateral association precedes the formation of a continuous network through the sample cell. Following the initial association of chain segments in junction zones, the analysis using two-component broken rod model indicates the formation of larger bundles, and that the relative weight of these bundles increases with increasing time. The molecular model for the bundles is proposed by associating 2-16 units (G-blocks) composed of 14 (1→4) linked residues of α- L-GulA in parallel according to the available crystallographic data. The storage modulus increases as the bundles composed of associated alginate chains grow during the gel formation. The gel elasticity is mainly sustained by single chains in the alginate sample with a low fraction of α- L-GulA. The alginates with a high fraction of α- L-GulA associate into thicker bundles which join to form a network. Here the gel elasticity seems to be due to the flexible joints between bundles, since the fraction of single chains is extremely low.

Xiphinema americanum as Affected by Soil Organic Matter and Porosity.

PubMed

Ponchillia, P E

1972-07-01

The effects of four soil types, soil porosity, particle size, and organic matter were tested on survival and migration of Xiphinema americanum. Survival and migration were significantly greater in silt loam than in clay loam and silty clay soils. Nematode numbers were significantly greater in softs planted with soybeans than in fallow softs. Nematode survival was greatest at the higher of two pore space levels in four softs. Migration of X. americanum through soft particle size fractions of 75-150, 150-250, 250-500, 500-700, and 700-1,000 mu was significantly greater in the middle three fractions, with the least occurring in the smallest fraction. Additions of muck to silt loam and loamy sand soils resulted in reductions in survival and migration of the nematode. The fulvic acid fraction of muck, extracted with sodium hydroxide, had a deleterious effect on nematode activity. I conclude that soils with small amounts of air-filled pore space, extremes in pore size, or high organic matter content are deleterious to the migration and survival of X. americanum, and that a naturally occurring toxin affecting this species may be present in native soft organic matter.

A Computational Approach to Modeling Magma Ocean Evolution in 2-D and 3-D

NASA Astrophysics Data System (ADS)

Tackley, P. J.; Louro Lourenço, D. J.; Fomin, I.

2017-12-01

Models of magma ocean evolution have typically been performed in 1-D (e.g. Abe, PEPI 1997; Solomatov and Stevenson, JGR 1993; Elkins-Tanton EPSL 2008). However, 1-D models may miss important aspects of the process, in particular the possible development of solid-state convection before the magma ocean has completely crystallised, and possible large-scale overturn driven by thermal and/or compositional gradients. On the other hand, fully resolving magma ocean evolution in 2-D or 3-D would be extremely challenging due to the small time-scales and length-scales associated with turbulent convection in the magma and the extreme viscosity contrast between regions of high melt fraction and regions of low melt fraction, which are separated by a rheological threshold associated with the solid forming an interconnected matrix. Here, an intermediate approach to treat these has been implemented within the framework of the mantle convection code StagYY (Tackley, PEPI 2008). The basic approach is to resolve processes that occur in the mostly solid state (i.e. below the rheological threshold) while parameterising processes that occur in the mostly liquid state, based largely on the works of Y. Abe. Thus, turbulent convection in magma-rich regions is treated using an effective thermal conductivity based on mixing-length theory, and segregation of solid and liquid is treated using Darcy's law for low melt fractions or crystal settling (offset by vigorous convection) for high melt fractions. At the outer surface a combined radiative-conductive heat balance is implemented, including the temperature drop over a very thin ( cm) thermal boundary layer and reduction of radiative heat loss by an atmosphere. Key to the whole process is petrology: the coexisting compositions of magma and solid under various conditions including possible fractionation, and for this different approaches have been parameterised ranging from a simple basalt-harzburgite parameterisation to a bi-eutectic lower mantle melting model based on ab initio and laboratory experiments.

A computational approach to modelling magma ocean evolution in 2-D and 3-D

NASA Astrophysics Data System (ADS)

Tackley, Paul; Lourenco, Diogo; Fomin, Ilya

2017-04-01

Models of magma ocean evolution have typically been performed in 1-D (e.g. Abe, PEPI 1997; Solomatov and Stevenson, JGR 1993; Elkins-Tanton EPSL 2008). However, 1-D models may miss important aspects of the process, in particular the possible development of solid-state convection before the magma ocean has completely crystallised, and possible large-scale overturn driven by thermal and/or compositional gradients. On the other hand, fully resolving magma ocean evolution in 2-D or 3-D would be extremely challenging due to the small time-scales and length-scales associated with turbulent convection in the magma and the extreme viscosity contrast between regions of high melt fraction and regions of low melt fraction, which are separated by a rheological threshold associated with the solid forming an interconnected matrix. Here, an intermediate approach to treat these has been implemented within the framework of the mantle convection code StagYY (Tackley, PEPI 2008). The basic approach is to resolve processes that occur in the mostly solid state (i.e. below the rheological threshold) while parameterising processes that occur in the mostly liquid state, based largely on the works of Y. Abe. Thus, turbulent convection in magma-rich regions is treated using an effective thermal conductivity based on mixing-length theory, and segregation of solid and liquid is treated using Darcy's law for low melt fractions or crystal settling (offset by vigorous convection) for high melt fractions. At the outer surface a combined radiative-conductive heat balance is implemented, including the temperature drop over a very thin ( cm) thermal boundary layer and reduction of radiative heat loss by an atmosphere. Key to the whole process is petrology: the coexisting compositions of magma and solid under various conditions including possible fractionation, and for this different approaches have been parameterised ranging from a simple basalt-harzburgite parameterisation to a bi-eutectic lower mantle melting model based on ab initio and laboratory experiments.

Gravo-Aeroelastic Scaling for Extreme-Scale Wind Turbines

DOE Office of Scientific and Technical Information (OSTI.GOV)

Fingersh, Lee J; Loth, Eric; Kaminski, Meghan

2017-06-09

A scaling methodology is described in the present paper for extreme-scale wind turbines (rated at 10 MW or more) that allow their sub-scale turbines to capture their key blade dynamics and aeroelastic deflections. For extreme-scale turbines, such deflections and dynamics can be substantial and are primarily driven by centrifugal, thrust and gravity forces as well as the net torque. Each of these are in turn a function of various wind conditions, including turbulence levels that cause shear, veer, and gust loads. The 13.2 MW rated SNL100-03 rotor design, having a blade length of 100-meters, is herein scaled to the CART3more » wind turbine at NREL using 25% geometric scaling and blade mass and wind speed scaled by gravo-aeroelastic constraints. In order to mimic the ultralight structure on the advanced concept extreme-scale design the scaling results indicate that the gravo-aeroelastically scaled blades for the CART3 are be three times lighter and 25% longer than the current CART3 blades. A benefit of this scaling approach is that the scaled wind speeds needed for testing are reduced (in this case by a factor of two), allowing testing under extreme gust conditions to be much more easily achieved. Most importantly, this scaling approach can investigate extreme-scale concepts including dynamic behaviors and aeroelastic deflections (including flutter) at an extremely small fraction of the full-scale cost.« less

Free-stream disturbance, continuous Eigenfunctions, boundary-layer instability and transition

NASA Technical Reports Server (NTRS)

Grosch, C. E.

1980-01-01

A rational foundation is presented for the application of the linear shear flows to transition prediction, and an explicit method is given for carrying out the necessary calculations. The expansions used are shown to be complete. Sample calculations show that a typical boundary layer is very sensitive to vorticity disturbances in the inner boundary layer, near the critical layer. Vorticity disturbances three or four boundary layer thicknesses above the boundary are nearly uncoupled from the boundary layer in that the amplitudes of the discrete Tollmien-Schlicting waves are an extremely small fraction of the amplitude of the disturbance.

Investigation of CNTD Silicon Nitride on Complex Shapes.

DTIC Science & Technology

1980-02-06

tubing) ! NH 3 + H 2 + N 2 SiCl4 + N2 Chamber Pressure, 4 2 To Manometer (copper tubing) t8 2 A: 2" DIA or 0 0 " To Pumping System _____________Pt/Pt-l3Rh...Total Gas Flow Rate: 47,350 cm3/min Gas Composition: N2 = 25,000 ml/min H2 = 20,600 ml/min Ar = 700 ml/min NH3 = 650 ml/min SiCl4 = 400 ml/min The...Values for SiCl4 were not available. In addition, the fractions of these two gases are extremely small in the overall gas composition. Individual

Markers of Successful Extubation in Extremely Preterm Infants, and Morbidity After Failed Extubation

PubMed Central

Chawla, Sanjay; Natarajan, Girija; Shankaran, Seetha; Carper, Benjamin; Brion, Luc P.; Keszler, Martin; Carlo, Waldemar A.; Ambalavanan, Namasivayam; Gantz, Marie G.; Das, Abhik; Finer, Neil; Goldberg, Ronald N.; Cotten, C. Michael; Higgins, Rosemary D.

2017-01-01

Objectives To identify variables associated with successful elective extubation, and to determine neonatal morbidities associated with extubation failure in extremely preterm neonates. Study design This study was a secondary analysis of the National Institute of Child Health and Human Development Neonatal Research Network’s Surfactant, Positive Pressure, and Oxygenation Randomized Trial that included extremely preterm infants born at 240/7 to 276/7 weeks’ gestation. Patients were randomized either to a permissive ventilatory strategy (continuous positive airway pressure group) or intubation followed by early surfactant (surfactant group). There were prespecified intubation and extubation criteria. Extubation failure was defined as reintubation within 5 days of extubation. Results Of 1316 infants in the trial, 1071 were eligible; 926 infants had data available on extubation status; 538 were successful and 388 failed extubation. The rate of successful extubation was 50% (188/374) in the continuous positive airway pressure group and 63% (350/552) in the surfactant group. Successful extubation was associated with higher 5-minute Apgar score, and pH prior to extubation, lower peak fraction of inspired oxygen within the first 24 hours of age and prior to extubation, lower partial pressure of carbon dioxide prior to extubation, and non-small for gestational age status after adjustment for the randomization group assignment. Infants who failed extubation had higher adjusted rates of mortality (OR 2.89), bronchopulmonary dysplasia (OR 3.06), and death/bronchopulmonary dysplasia (OR 3.27). Conclusions Higher 5-minute Apgar score, and pH prior to extubation, lower peak fraction of inspired oxygen within first 24 hours of age, lower partial pressure of carbon dioxide and fraction of inspired oxygen prior to extubation, and nonsmall for gestational age status were associated with successful extubation. Failed extubation was associated with significantly higher likelihood of mortality and morbidities. Trial registration ClinicalTrials.gov: NCT00233324. PMID:28600154

Markers of Successful Extubation in Extremely Preterm Infants, and Morbidity After Failed Extubation.

PubMed

Chawla, Sanjay; Natarajan, Girija; Shankaran, Seetha; Carper, Benjamin; Brion, Luc P; Keszler, Martin; Carlo, Waldemar A; Ambalavanan, Namasivayam; Gantz, Marie G; Das, Abhik; Finer, Neil; Goldberg, Ronald N; Cotten, C Michael; Higgins, Rosemary D

2017-10-01

To identify variables associated with successful elective extubation, and to determine neonatal morbidities associated with extubation failure in extremely preterm neonates. This study was a secondary analysis of the National Institute of Child Health and Human Development Neonatal Research Network's Surfactant, Positive Pressure, and Oxygenation Randomized Trial that included extremely preterm infants born at 24 0/7 to 27 6/7 weeks' gestation. Patients were randomized either to a permissive ventilatory strategy (continuous positive airway pressure group) or intubation followed by early surfactant (surfactant group). There were prespecified intubation and extubation criteria. Extubation failure was defined as reintubation within 5 days of extubation. Of 1316 infants in the trial, 1071 were eligible; 926 infants had data available on extubation status; 538 were successful and 388 failed extubation. The rate of successful extubation was 50% (188/374) in the continuous positive airway pressure group and 63% (350/552) in the surfactant group. Successful extubation was associated with higher 5-minute Apgar score, and pH prior to extubation, lower peak fraction of inspired oxygen within the first 24 hours of age and prior to extubation, lower partial pressure of carbon dioxide prior to extubation, and non-small for gestational age status after adjustment for the randomization group assignment. Infants who failed extubation had higher adjusted rates of mortality (OR 2.89), bronchopulmonary dysplasia (OR 3.06), and death/ bronchopulmonary dysplasia (OR 3.27). Higher 5-minute Apgar score, and pH prior to extubation, lower peak fraction of inspired oxygen within first 24 hours of age, lower partial pressure of carbon dioxide and fraction of inspired oxygen prior to extubation, and nonsmall for gestational age status were associated with successful extubation. Failed extubation was associated with significantly higher likelihood of mortality and morbidities. ClinicalTrials.gov: NCT00233324. Copyright © 2017 Elsevier Inc. All rights reserved.

Greenland Ice Sheet Melt from MODIS and Associated Atmospheric Variability

NASA Technical Reports Server (NTRS)

Hakkinen, Sirpa; Hall, Dorothy K.; Shuman, Christopher A.; Worthen, Denise L.; DiGirolamo, Nicolo E.

2014-01-01

Daily June-July melt fraction variations over the Greenland Ice Sheet (GIS) derived from the MODerate-resolution Imaging Spectroradiometer (MODIS) (2000-2013) are associated with atmospheric blocking forming an omega-shape ridge over the GIS at 500hPa height (from NCEPNCAR). Blocking activity with a range of time scales, from synoptic waves breaking poleward ( 5 days) to full-fledged blocks (5 days), brings warm subtropical air masses over the GIS controlling daily surface temperatures and melt. The temperature anomaly of these subtropical air mass intrusions is also important for melting. Based on the largest MODIS melt years (2002 and 2012), the area-average temperature anomaly of 2 standard deviations above the 14-year June-July mean, results in a melt fraction of 40 or more. Summer 2007 had the most blocking days, however atmospheric temperature anomalies were too small to instigate extreme melting.

Toward one-loop tunneling rates of near-extremal magnetic black hole pair production

DOE Office of Scientific and Technical Information (OSTI.GOV)

Yi, P.

Pair production of magnetic Reissner-Nordstroem black holes (of charges [plus minus][ital q]) was recently studied in the leading WKB approximation. Here we consider generic quantum fluctuations in the corresponding instanton geometry given by the Euclidean Ernst metric, in order to simulate the behavior of the one-loop tunneling rate. A detailed study of the Ernst metric suggests that for a sufficiently weak field [ital B], the problem can be reduced to that of quantum fluctuations around a single near-extremal Euclidean black hole in thermal equilibrium with a heat bath of finite size. After appropriate renormalization procedures, typical one-loop contributions to themore » WKB exponent are shown to be inversely proportional to [ital B], as [ital B][r arrow]0, indicating that the leading Schwinger term is corrected by a small fraction [similar to][h bar]/[ital q][sup 2]. We demonstrate that this correction to the Schwinger term is actually due to a semiclassical shift of the black hole mass-to-charge ratio that persists even in the extremal limit. Finally we discuss a few loose ends.« less

SU-G-JeP4-14: Assessment of Inter- and Intra-Fractional Motion for Extremity Soft Tissue Sarcoma Patients by Using In-House Real-Time Optical Image-Based Monitoring System

DOE Office of Scientific and Technical Information (OSTI.GOV)

Kim, H; Kim, I; Ye, S

Purpose: This study aimed to assess inter- and intra-fractional motion for extremity Soft Tissue Sarcoma (STS) patients, by using in-house real-time optical image-based monitoring system (ROIMS) with infra-red (IR) external markers. Methods: Inter- and intra-fractional motions for five extremity (1 upper, 4 lower) STS patients received postoperative 3D conformal radiotherapy (3D-CRT) were measured by registering the image acquired by ROIMS with the planning CT image (REG-ROIMS). To compare with the X-ray image-based monitoring, pre- and post-treatment cone beam computed tomography (CBCT) scans were performed once per week and registered with planning CT image as well (REG-CBCT). If the CBCT scanmore » is not feasible due to the large couch shift, AP and LR on-board imager (OBI) images were acquired. The comparison was done by calculating mutual information (MI) of those registered images. Results: The standard deviation (SD) of the inter-fractional motion was 2.6 mm LR, 2.8 mm SI, and 2.0 mm AP, and the SD of the intra-fractional motion was 1.4 mm, 2.1 mm, and 1.3 mm in each axis, respectively. The SD of rotational inter-fractional motion was 0.6° pitch, 0.9° yaw, and 0.8° roll and the SD of rotational intra-fractional motion was 0.4° pitch, 0.9° yaw, and 0.7° roll. The derived averaged MI values were 0.83, 0.92 for REG-CBCT without rotation and REG-ROIMS with rotation, respectively. Conclusion: The in-house real-time optical image-based monitoring system was implemented clinically and confirmed the feasibility to assess inter- and intra-fractional motion for extremity STS patients while the daily basis and real-time CBCT scan is not feasible in clinic.« less

The EUV spectrophotometer on Atmosphere Explorer.

NASA Technical Reports Server (NTRS)

Hinteregger, H. E.; Bedo, D. E.; Manson, J. E.

1973-01-01

An extreme ultraviolet (EUV) spectrophotometer for measurements of solar radiation at wavelengths ranging from 140 to 1850 A will be included in the payload of each of the three Atmosphere-Explorer (AE) missions, AE-C, -D, and -E. The instrument consists of 24 grating monochromators, 12 of which can be telecommanded either to execute 128-step scans each covering a relatively small section of the total spectrophotometer wavelength range or to maintain fixed (command-selected) wavelength positions. The remaining 12 nonscan monochromators operate at permanently fixed wavelengths and view only a small fraction of the solar disk except for one viewing the whole sun in H Lyman alpha. Ten of the 12 scan-capable monochromators also view the entire solar disk since their primary function is to measure the total fluxes independent of the distribution of sources across the solar disk.

Design and Manufacturing of Extremely Low Mass Flight Systems

NASA Technical Reports Server (NTRS)

Johnson, Michael R.

2002-01-01

Extremely small flight systems pose some unusual design and manufacturing challenges. The small size of the components that make up the system generally must be built with extremely tight tolerances to maintain the functionality of the assembled item. Additionally, the total mass of the system is extremely sensitive to what would be considered small perturbations in a larger flight system. The MUSES C mission, designed, built, and operated by Japan, has a small rover provided by NASA that falls into this small flight system category. This NASA-provided rover is used as a case study of an extremely small flight system design. The issues that were encountered with the rover portion of the MUSES C program are discussed and conclusions about the recommended mass margins at different stages of a small flight system project are presented.

Extreme events in total ozone over Arosa - Part 1: Application of extreme value theory

NASA Astrophysics Data System (ADS)

Rieder, H. E.; Staehelin, J.; Maeder, J. A.; Peter, T.; Ribatet, M.; Davison, A. C.; Stübi, R.; Weihs, P.; Holawe, F.

2010-10-01

In this study ideas from extreme value theory are for the first time applied in the field of stratospheric ozone research, because statistical analysis showed that previously used concepts assuming a Gaussian distribution (e.g. fixed deviations from mean values) of total ozone data do not adequately address the structure of the extremes. We show that statistical extreme value methods are appropriate to identify ozone extremes and to describe the tails of the Arosa (Switzerland) total ozone time series. In order to accommodate the seasonal cycle in total ozone, a daily moving threshold was determined and used, with tools from extreme value theory, to analyse the frequency of days with extreme low (termed ELOs) and high (termed EHOs) total ozone at Arosa. The analysis shows that the Generalized Pareto Distribution (GPD) provides an appropriate model for the frequency distribution of total ozone above or below a mathematically well-defined threshold, thus providing a statistical description of ELOs and EHOs. The results show an increase in ELOs and a decrease in EHOs during the last decades. The fitted model represents the tails of the total ozone data set with high accuracy over the entire range (including absolute monthly minima and maxima), and enables a precise computation of the frequency distribution of ozone mini-holes (using constant thresholds). Analyzing the tails instead of a small fraction of days below constant thresholds provides deeper insight into the time series properties. Fingerprints of dynamical (e.g. ENSO, NAO) and chemical features (e.g. strong polar vortex ozone loss), and major volcanic eruptions, can be identified in the observed frequency of extreme events throughout the time series. Overall the new approach to analysis of extremes provides more information on time series properties and variability than previous approaches that use only monthly averages and/or mini-holes and mini-highs.

Extreme events in total ozone over Arosa - Part 1: Application of extreme value theory

NASA Astrophysics Data System (ADS)

Rieder, H. E.; Staehelin, J.; Maeder, J. A.; Peter, T.; Ribatet, M.; Davison, A. C.; Stübi, R.; Weihs, P.; Holawe, F.

2010-05-01

In this study ideas from extreme value theory are for the first time applied in the field of stratospheric ozone research, because statistical analysis showed that previously used concepts assuming a Gaussian distribution (e.g. fixed deviations from mean values) of total ozone data do not adequately address the structure of the extremes. We show that statistical extreme value methods are appropriate to identify ozone extremes and to describe the tails of the Arosa (Switzerland) total ozone time series. In order to accommodate the seasonal cycle in total ozone, a daily moving threshold was determined and used, with tools from extreme value theory, to analyse the frequency of days with extreme low (termed ELOs) and high (termed EHOs) total ozone at Arosa. The analysis shows that the Generalized Pareto Distribution (GPD) provides an appropriate model for the frequency distribution of total ozone above or below a mathematically well-defined threshold, thus providing a statistical description of ELOs and EHOs. The results show an increase in ELOs and a decrease in EHOs during the last decades. The fitted model represents the tails of the total ozone data set with high accuracy over the entire range (including absolute monthly minima and maxima), and enables a precise computation of the frequency distribution of ozone mini-holes (using constant thresholds). Analyzing the tails instead of a small fraction of days below constant thresholds provides deeper insight into the time series properties. Fingerprints of dynamical (e.g. ENSO, NAO) and chemical features (e.g. strong polar vortex ozone loss), and major volcanic eruptions, can be identified in the observed frequency of extreme events throughout the time series. Overall the new approach to analysis of extremes provides more information on time series properties and variability than previous approaches that use only monthly averages and/or mini-holes and mini-highs.

OXYGEN AND SODIUM ABUNDANCES IN M13 (NGC 6205) GIANTS: LINKING GLOBULAR CLUSTER FORMATION SCENARIOS, DEEP MIXING, AND POST-RGB EVOLUTION

DOE Office of Scientific and Technical Information (OSTI.GOV)

Johnson, Christian I.; Pilachowski, Catherine A., E-mail: cijohnson@astro.ucla.edu, E-mail: catyp@astro.indiana.edu

We present O, Na, and Fe abundances, as well as radial velocities, for 113 red giant branch (RGB) and asymptotic giant branch (AGB) stars in the globular cluster M13. The abundances and velocities are based on spectra obtained with the WIYN-Hydra spectrograph, and the observations range in luminosity from the horizontal branch (HB) to RGB tip. The results are examined in the context of recent globular cluster formation scenarios. We find that M13 exhibits many key characteristics that suggest its formation and chemical enrichment are well described by current models. Some of these observations include the central concentration of O-poormore » stars, the notable decrease in [O/Fe] (but small increase in [Na/Fe]) with increasing luminosity that affects primarily the 'extreme' population, the small fraction of stars with halo-like composition, and the paucity of O-poor AGB stars. In agreement with recent work, we conclude that the most O-poor M13 giants are likely He-enriched and that most (all?) O-poor RGB stars evolve to become extreme HB and AGB-manque stars. In contrast, the 'primordial' and 'intermediate' population stars appear to experience standard HB and AGB evolution.« less

A Preliminary Study of the Preparation of Slurry Fuels from Vaporized Magnesium

NASA Technical Reports Server (NTRS)

Witzke, Walter R; Prok, George M; Walsh, Thomas J

1954-01-01

Slurry fuels containing extremely small particles of magnesium were prepared by concentrating the dilute slurry product resulting from the shock-cooling of magnesium metal vapors with a liquid hydrocarbon spray. A complete description of the equipment and procedure used in preparing the fuel is given. Ninety-five percent by weight of the solid particles formed by this process passed through a 100-mesh screen. The particle-size distribution of the screened fraction of one run, as determined by sedimentation analysis, indicated that 73 percent by weight of the metal particles were finer than 2 microns in equivalent spherical diameter. The purity of the solid particles ranged as high as 98.9 percent by weight of free magnesium. The screened product was concentrated by means of a bowl-type centrifuge from 0.5 to more than 50 percent by weight solids content to form an extremely viscous, clay-like mass. By addition of a surface active agent, this viscous material was converted into a pumpable slurry fuel.

Confirmation of Small Dynamical and Stellar Masses for Extreme Emission Line Galaxies at z Approx. 2

NASA Technical Reports Server (NTRS)

Maseda, Michael V.; van Der Wel, Arjen; da Cunha, Elisabete; Rix, Hans-Walter; Pacifici, Camilla; Momcheva, Ivelina; Brammer, Gabriel B.; Franx, Marijn; van Dokkum, Pieter; Bell, Eric F.;

The Support of Air Operations Under Extreme Hot and Cold Weather Conditions (Les Operatons Aeriennes en Environnement Extreme Chaud/Froid)

DTIC Science & Technology

1993-10-01

particular subject’s water turnover data could be considered triglyceride , high density lipoprotein ( HDL ), low density an outlier (20). Ali results are... Cholesterol and triglycerides values tended to decrease pre- retrospectively distinguish the bars enough to accurately rate to post-study. Further...there was an increase in the HDL them individually. However, the field data show that even fraction and a decrease in the LDL fraction of cholesterol

Fractionation in the solar nebula - Condensation of yttrium and the rare earth elements

NASA Technical Reports Server (NTRS)

Boynton, W. V.

1975-01-01

The condensation of Y and the rare earth elements (REE) from the solar nebula may be controlled by thermodynamic equilibrium between gas and condensed solids. Highly fractionated REE patterns may result if condensates are removed from the gas before condensation is complete. It is found that the fractionation is not a smooth function of REE ionic radius but varies in an extremely irregular pattern. Both Yb and Eu are predicted to be extremely depleted in the early condensate without the requirement of condensation in the divalent state. The model is discussed with respect to a highly fractionated pattern observed by Tanaka and Masuda (1973), in a pink Ca-Al-rich inclusion from the Allende meteorite and can account for the abundances of each REE determined. According to the model this inclusion represents a condensate from a previously fractionated gas rather than from a gas of solar composition. Before the condensation of this inclusion, an earlier condensate was formed and was removed from equilibrium with the gas.

Practice makes perfect in memory recall

PubMed Central

Romani, Sandro; Katkov, Mikhail

2016-01-01

A large variability in performance is observed when participants recall briefly presented lists of words. The sources of such variability are not known. Our analysis of a large data set of free recall revealed a small fraction of participants that reached an extremely high performance, including many trials with the recall of complete lists. Moreover, some of them developed a number of consistent input-position-dependent recall strategies, in particular recalling words consecutively (“chaining”) or in groups of consecutively presented words (“chunking”). The time course of acquisition and particular choice of positional grouping were variable among participants. Our results show that acquiring positional strategies plays a crucial role in improvement of recall performance. PMID:26980785

Application of phenotypic microarrays to environmental microbiology

DOE Office of Scientific and Technical Information (OSTI.GOV)

Borglin, sharon; Joyner, Dominique; DeAngelis, Kristen

2012-01-01

Environmental organisms are extremely diverse and only a small fraction has been successfully cultured in the laboratory. Culture in micro wells provides a method for rapid screening of a wide variety of growth conditions and commercially available plates contain a large number of substrates, nutrient sources, and inhibitors, which can provide an assessment of the phenotype of an organism. This review describes applications of phenotype arrays to anaerobic and thermophilic microorganisms, use of the plates in stress response studies, in development of culture media for newly discovered strains, and for assessment of phenotype of environmental communities. Also discussed are considerationsmore » and challenges in data interpretation and visualization, including data normalization, statistics, and curve fitting.« less

Analytical Phase Equilibrium Function for Mixtures Obeying Raoult's and Henry's Laws

NASA Astrophysics Data System (ADS)

Hayes, Robert

When a mixture of two substances exists in both the liquid and gas phase at equilibrium, Raoults and Henry's laws (ideal solution and ideal dilute solution approximations) can be used to estimate the gas and liquid mole fractions at the extremes of either very little solute or solvent. By assuming that a cubic polynomial can reasonably approximate the intermediate values to these extremes as a function of mole fraction, the cubic polynomial is solved and presented. A closed form equation approximating the pressure dependence on mole fraction of the constituents is thereby obtained. As a first approximation, this is a very simple and potentially useful means to estimate gas and liquid mole fractions of equilibrium mixtures. Mixtures with an azeotrope require additional attention if this type of approach is to be utilized. This work supported in part by federal Grant NRC-HQ-84-14-G-0059.

Characterization of extreme air-sea turbulent fluxes

NASA Astrophysics Data System (ADS)

Gulev, Sergey; Belyaev, Konstantin

2017-04-01

Extreme ocean-atmosphere turbulent fluxes play a critical role in the convective processes in the mid and subpolar latitudes and may also affect a variety of atmospheric processes, such as generation and re-intensification of extreme cyclones in the areas of the mid latitude storm tracks. From the ocean dynamics perspective, specifically for quantifying extreme vertical mixing, characterization of the extreme fluxes requires, besides estimation of the extreme events, also consideration of the relative extremeness of surface fluxes and their timing, e.g. the duration of periods of high surface fluxes. In order to comprehensively characterize extreme turbulent fluxes at sea surface we propose a formalism based upon probability density distributions of surface turbulent fluxes and flux-related variables. Individual absolute flux extremes were derived using Modified Fisher-Tippett (MFT) distribution of turbulent fluxes. Then, we extend this distribution to the fractional distribution, characterizing the fraction of time-integrated turbulent heat flux provided by the fluxes exceeding a given percentile. Finally, we consider the time durations during which fluxes of a given intensity provide extreme accumulations of heat loss from the surface. For estimation of these characteristics of surface fluxes we use fluxes recomputed from the state variables available from modern era reanalyses (ERA-Interim, MERRA and CFSR) for the period from 1979 onwards. Applications of the formalism to the VOS (Voluntary Observing Ship) - based surface fluxes are also considered. We discuss application of the new metrics of mesoscale and synoptic variability of surface fluxes to the dynamics of mixed layer depth in the North Atlantic.

Repeatability of chemical-shift-encoded water-fat MRI and diffusion-tensor imaging in lower extremity muscles in children.

PubMed

Ponrartana, Skorn; Andrade, Kristine E; Wren, Tishya A L; Ramos-Platt, Leigh; Hu, Houchun H; Bluml, Stefan; Gilsanz, Vicente

2014-06-01

The purpose of this study was to assess the repeatability of water-fat MRI and diffusion-tensor imaging (DTI) as quantitative biomarkers of pediatric lower extremity skeletal muscle. MRI at 3 T of a randomly selected thigh and lower leg of seven healthy children was studied using water-fat separation and DTI techniques. Muscle-fat fraction, apparent diffusion coefficient (ADC), and fractional anisotropy (FA) values were calculated. Test-retest and interrater repeatability were assessed by calculating the Pearson correlation coefficient, intraclass correlation coefficient, and Bland-Altman analysis. Bland-Altman plots show that the mean difference between test-retest and interrater measurements of muscle-fat fraction, ADC, and FA was near 0. The correlation coefficients and intraclass correlation coefficients were all between 0.88 and 0.99 (p < 0.05), suggesting excellent reliability of the measurements. Muscle-fat fraction measurements from water-fat MRI exhibited the highest intraclass correlation coefficient. Interrater agreement was consistently better than test-retest comparisons. Water-fat MRI and DTI measurements in lower extremity skeletal muscles are objective repeatable biomarkers in children. This knowledge should aid in the understanding of the number of participants needed in clinical trials when using these determinations as an outcome measure to noninvasively monitor neuromuscular disease.

Using the Student's "t"-Test with Extremely Small Sample Sizes

ERIC Educational Resources Information Center

de Winter, J. C .F.

2013-01-01

Researchers occasionally have to work with an extremely small sample size, defined herein as "N" less than or equal to 5. Some methodologists have cautioned against using the "t"-test when the sample size is extremely small, whereas others have suggested that using the "t"-test is feasible in such a case. The present…

Individual Differences in Students' Knowing and Learning about Fractions: Evidence from an In-Depth Qualitative Study

ERIC Educational Resources Information Center

Bempeni, Maria; Vamvakoussi, Xenia

2015-01-01

We present the results of an in-depth qualitative study that examined ninth graders' conceptual and procedural knowledge of fractions as well as their approach to mathematics learning, in particular fraction learning. We traced individual differences, even extreme, in the way that students combine the two kinds of knowledge. We also provide…

Survival of microbial life under shock compression: implications for Panspermia

NASA Astrophysics Data System (ADS)

Burchell, M.

2007-09-01

An analysis is carried out of the survival fraction of micro-organisms exposed to extreme shock pressures. A variety of data sources are used in this analysis. The key findings are that survival depends on the behaviour of the cell wall. Below a critical shock pressure there is a relatively slow fall in survival fraction as shock pressures increase. Above the critical threshold survival starts to fall rapidly as shock pressure increases further. The critical shock pressures found here are in the range 2.4 to 20 GPa, and vary not only from organism to organism, but also depend on the growth stage of given organisms, with starved (i.e., no growth) states favoured for survival. At the shock pressures typical of those involved in interplanetary transfer of rocky materials, the survival fractions are found to be small but finite. This lends credence to the idea of Panspermia, i.e. life may naturally migrate through space. Thus for example, Martian meteorites should not a prior be considered as sterile due to the shock processes they have undergone, but their lack of viable micro-organisms either reflects no such life being present at the source at the time of departure or the influence of other hazardous processes such as radiation in space or heating of surfaces during entry into a planetary atmosphere.

An approach to the determination of the enantiomeric excess at the extreme case by capillary electrophoresis.

PubMed

Xiao, Hongting; Fu, Xia; Liang, Shuang; Li, Youxin; Bao, James J; Zhang, Yong

2015-08-21

Capillary electrophoresis (CE) has been applied to determine the percentage of enantiomeric excess (ee%) of chiral compounds. In such assays, the quality of chiral selectors (CSs) plays vital roles in resolving the enantiomers for accurate determination of the ee%. Selecting an efficient CS is usually by trial and error, and is, if ever possible, time-consuming and costly. Here we propose a new approach by using the velocity gap mode of CE (VGCE) method, to simplify the method development process for ee% determination. With VGCE, it is still possible to measure ee% even when the CS has a weak resolving power. This is especially important at the extreme cases where one of the enantiomers is significantly higher than the other one. The key point of VGCE in this case is to fractionate the small part of the mixture containing both enantiomers from the major component of the enantiomer, which is already enantiopure. Baseline separations can be achieved between the two enantiomers for the small mixture due to less longitudinal dispersion, making it possible to determine the ee%. The feasibility of this VGCE approach was confirmed by the ee% measurements of amlodipine and ofloxacin, respectively. And the practical application of VGCE was tested by analyzing levamlodipine besylate tablet. Copyright © 2015 Elsevier B.V. All rights reserved.

Evidence for extensive horizontal gene transfer from the draft genome of a tardigrade

PubMed Central

Boothby, Thomas C.; Tenlen, Jennifer R.; Smith, Frank W.; Wang, Jeremy R.; Patanella, Kiera A.; Osborne Nishimura, Erin; Tintori, Sophia C.; Li, Qing; Jones, Corbin D.; Yandell, Mark; Glasscock, Jarret; Goldstein, Bob

2015-01-01

Horizontal gene transfer (HGT), or the transfer of genes between species, has been recognized recently as more pervasive than previously suspected. Here, we report evidence for an unprecedented degree of HGT into an animal genome, based on a draft genome of a tardigrade, Hypsibius dujardini. Tardigrades are microscopic eight-legged animals that are famous for their ability to survive extreme conditions. Genome sequencing, direct confirmation of physical linkage, and phylogenetic analysis revealed that a large fraction of the H. dujardini genome is derived from diverse bacteria as well as plants, fungi, and Archaea. We estimate that approximately one-sixth of tardigrade genes entered by HGT, nearly double the fraction found in the most extreme cases of HGT into animals known to date. Foreign genes have supplemented, expanded, and even replaced some metazoan gene families within the tardigrade genome. Our results demonstrate that an unexpectedly large fraction of an animal genome can be derived from foreign sources. We speculate that animals that can survive extremes may be particularly prone to acquiring foreign genes. PMID:26598659

Evidence for extensive horizontal gene transfer from the draft genome of a tardigrade.

PubMed

Boothby, Thomas C; Tenlen, Jennifer R; Smith, Frank W; Wang, Jeremy R; Patanella, Kiera A; Nishimura, Erin Osborne; Tintori, Sophia C; Li, Qing; Jones, Corbin D; Yandell, Mark; Messina, David N; Glasscock, Jarret; Goldstein, Bob

2015-12-29

Horizontal gene transfer (HGT), or the transfer of genes between species, has been recognized recently as more pervasive than previously suspected. Here, we report evidence for an unprecedented degree of HGT into an animal genome, based on a draft genome of a tardigrade, Hypsibius dujardini. Tardigrades are microscopic eight-legged animals that are famous for their ability to survive extreme conditions. Genome sequencing, direct confirmation of physical linkage, and phylogenetic analysis revealed that a large fraction of the H. dujardini genome is derived from diverse bacteria as well as plants, fungi, and Archaea. We estimate that approximately one-sixth of tardigrade genes entered by HGT, nearly double the fraction found in the most extreme cases of HGT into animals known to date. Foreign genes have supplemented, expanded, and even replaced some metazoan gene families within the tardigrade genome. Our results demonstrate that an unexpectedly large fraction of an animal genome can be derived from foreign sources. We speculate that animals that can survive extremes may be particularly prone to acquiring foreign genes.

Practice makes perfect in memory recall.

PubMed

Romani, Sandro; Katkov, Mikhail; Tsodyks, Misha

2016-04-01

A large variability in performance is observed when participants recall briefly presented lists of words. The sources of such variability are not known. Our analysis of a large data set of free recall revealed a small fraction of participants that reached an extremely high performance, including many trials with the recall of complete lists. Moreover, some of them developed a number of consistent input-position-dependent recall strategies, in particular recalling words consecutively ("chaining") or in groups of consecutively presented words ("chunking"). The time course of acquisition and particular choice of positional grouping were variable among participants. Our results show that acquiring positional strategies plays a crucial role in improvement of recall performance. © 2016 Romani et al.; Published by Cold Spring Harbor Laboratory Press.

Regional and local increases in storm intensity in the San Francisco Bay Area, USA, between 1890 and 2010

NASA Astrophysics Data System (ADS)

Russo, Tess A.; Fisher, Andrew T.; Winslow, Dustin M.

2013-04-01

Studies of extreme precipitation have documented changes at the continental scale during the twentieth century, but few studies have quantified changes at small to regional spatial scales during the same time. We analyze historic data from over 600 precipitation stations in the San Francisco Bay Area (SFBA), California, to assess whether there have been statistically significant changes in extreme precipitation between 1890 and 2010. An annual exceedance probability analysis of extreme precipitation events in the SFBA, coupled with a Markov chain Monte Carlo algorithm, reveals an increase in the occurrence of large events. The depth-duration-frequency characteristics of maximum annual precipitation events having durations of 1 h to 60 days indicate on average an increase in storm intensity in the last 120 years, with the intensity of the largest (least frequent) events increasing the most. Mean annual precipitation (MAP) also increased during the study period, but the relative increase in extreme event intensity exceeds that of MAP, indicating that a greater fraction of precipitation fell during large events. Analysis of data from subareas within the SFBA region indicates considerable heterogeneity in the observed nonstationarity; for example, the 5 day, 25 year event exceedance depth changed by +26%, +16%, and -1% in San Francisco, Santa Rosa, and San Jose, respectively. These results emphasize the importance of analyzing local data for accurate risk assessment, emergency planning, resource management, and climate model calibration.

F response and H reflex analysis of physiological unity of gravity and antigravity muscles in man.

PubMed

García, H A; Fisher, M A

1977-01-01

Observational differences between reflex (H reflex) and antidromic (F response) activation of segmental motoneurons by a peripheral electrical stimulus are described. In contrast to H reflexes, the percentage of F responses found after a series of stimuli is directly related to the pick-up field of the recording electrode consistent with this response being due to the variable activation of a small fraction of the available motoneuron pool. Despite the differing physiological mechanisms, both F responses and H reflexes can be used to demonstrate similar relative "central excitatory states" for antigravity muscles (i.e. extensors in the lower extremity and flexors in the upper extremity) and their antagonist gravity muscles. H reflexes were elicited not only in their usual location in certain antigravity muscles but also in unusual locations by length/tension changes in agonist and antagonist groups as well as by passive stretch. The data argue for the physiological unity of similarly acting gravity and antigravity muscles as well as supporting a meaningful role of group II afferents in normal segmental motoneuron pool excitability.

A Fast Reduced Kernel Extreme Learning Machine.

PubMed

Deng, Wan-Yu; Ong, Yew-Soon; Zheng, Qing-Hua

2016-04-01

In this paper, we present a fast and accurate kernel-based supervised algorithm referred to as the Reduced Kernel Extreme Learning Machine (RKELM). In contrast to the work on Support Vector Machine (SVM) or Least Square SVM (LS-SVM), which identifies the support vectors or weight vectors iteratively, the proposed RKELM randomly selects a subset of the available data samples as support vectors (or mapping samples). By avoiding the iterative steps of SVM, significant cost savings in the training process can be readily attained, especially on Big datasets. RKELM is established based on the rigorous proof of universal learning involving reduced kernel-based SLFN. In particular, we prove that RKELM can approximate any nonlinear functions accurately under the condition of support vectors sufficiency. Experimental results on a wide variety of real world small instance size and large instance size applications in the context of binary classification, multi-class problem and regression are then reported to show that RKELM can perform at competitive level of generalized performance as the SVM/LS-SVM at only a fraction of the computational effort incurred. Copyright © 2015 Elsevier Ltd. All rights reserved.

Riverine C, N, Si and P transport to the coastal ocean: An overview

USGS Publications Warehouse

Peterson, David H.; Hager, Stephen W.; Schemel, Laurence E.; Cayan, Daniel R.

1988-01-01

Terrestrial ecosystems cycle and recyle inorganic nutrients including a feedback to atmospheric dry deposition and precipitation (cf. Lewis et al., 1985). Each year, however, a small fraction per unit area of the atmosphere/plant/soil flux leaks from these land-based cycles via precipitation/runoff (Meybeck, 1982). These losses are, in general, unpreventable. Moreover, such nutrient “losses” have increased with increasing human population (Wollast, 1983); although to some extent this anthropogenic component can be controlled. Most rivers eventually flow into estuaries and the coastal ocean where their natural and anthropogenic nutrient loads continue to recycle, are lost to the atmosphere, or are buried in sediment. In one extreme, when riverine nutrient concentrations are exceedingly low, as in southwestern Canadian streams (Naiman and Sibert, 1978; Stockner and Shortreed, 1978, 1985), downstream plant biomass can be nutrient limited. In the other extreme, when these nutrient concentrations are very high such as in highly populated European river basins, downstream plant biomass can increase, perhaps intensifying natural anoxia cycles within the receiving estuarine/coastal ocean waters if these waters are stratified (Rosenberg, 1985).

Ablative Fractional Carbon Dioxide Laser in the Treatment of Chronic, Posttraumatic, Lower-Extremity Ulcers in Elderly Patients.

PubMed

Phillips, Tania J; Morton, Laurel M; Uebelhoer, Nathan S; Dover, Jeffrey S

2015-08-01

Treating posttraumatic lower extremity wounds can be challenging, especially in elderly patients. Recently, the use of fractional carbon dioxide laser has been shown to improve wound healing in scar-related wounds. We used this treatment modality in posttraumatic wounds that were slow to heal in 3 elderly patients. Each wound underwent one fractional carbon dioxide laser treatment. The wound base was treated at 30 mJ and 5% density. The entire wound edge and 1 to 2 cm into the normal surrounding skin were treated at 50 mJ and 5% density. One pass was completed at 150 Hz per treatment. Treatments were well tolerated with only mild discomfort. Each wound healed by 60% or greater within 3 weeks. No adverse events were reported aside from mild and transient erythema at site of treatment. Fractional carbon dioxide laser treatment appeared to accelerate healing in each of these posttraumatic wounds. It may be a helpful adjunct in nonhealing posttraumatic wounds.

Variation of a Lightning NOx Indicator for National Climate Assessment

NASA Technical Reports Server (NTRS)

Koshak, W. J.; Vant-Hull, B.; McCaul, E. W.; Peterson, H. S.

2014-01-01

In support of the National Climate Assessment (NCA) program, satellite Lightning Imaging Sensor (LIS) data is used to estimate lightning nitrogen oxides (LNOx) production over the southern portion of the conterminous US. The total energy of each flash is estimated by analyzing the LIS optical event data associated with each flash (i.e., event radiance, event footprint area, and derivable event range). The LIS detects an extremely small fraction of the total flash energy; this fraction is assumed to be constant apart from the variability associated with the flash optical energy detected across the narrow (0.909 nm) LIS band. The estimate of total energy from each flash is converted to moles of LNOx production by assuming a chemical yield of 10(17) molecules Joule(-1). The LIS-inferred variable LNOx production from each flash is summed to obtain total LNOx production, and then appropriately enhanced to account for LIS detection efficiency and LIS view time. Annual geographical plots and time series of LNOx production are provided for a 16 year period (1998-2013).

Size dependence of chondrule textural types

NASA Technical Reports Server (NTRS)

Goswami, J. N.

1984-01-01

Chrondrule textural types were studied for size sorted chondrules from the ordinary chondrites Dhajala, Eston and Chainpur and the CM chondrite Murchison. Aliquot samples from size sorted Dhajala chondrules were studied for their oxygen isotopic composition and chondrules from Weston were studied for their precompaction irradiation records by nuclear track technique. Correlations between chondrule textural types and oxygen isotope or track data were identified. A distinct dependence of chondrule textural type on chondrule size was evident in the data for both Dhajala and Weston chondrules. No significant deviation was noticed in the abundance pattern of nonporphyritic chondrules within individual size fractions in the 200 to 800 micron size interval. Overabundance is found of nonporphyritic chondrules in the 100 to 200 micron size fraction of Murchison chondrules, the trend is not as distinct for Chainpur chondrules. Two hundred microns is suggested as the cutoff size below which radiative cooling is extremely efficient during the chondrule forming process. It is suggested that this offers a possibility for use of physical and chemical characteristics of small chondrules to constrain the temperature history during the chondrule formation process.

Greenland ice sheet melt from MODIS and associated atmospheric variability.

PubMed

Häkkinen, Sirpa; Hall, Dorothy K; Shuman, Christopher A; Worthen, Denise L; DiGirolamo, Nicolo E

2014-03-16

Daily June-July melt fraction variations over the Greenland ice sheet (GIS) derived from the Moderate Resolution Imaging Spectroradiometer (MODIS) (2000-2013) are associated with atmospheric blocking forming an omega-shape ridge over the GIS at 500 hPa height. Blocking activity with a range of time scales, from synoptic waves breaking poleward (<5 days) to full-fledged blocks (≥5 days), brings warm subtropical air masses over the GIS controlling daily surface temperatures and melt. The temperature anomaly of these subtropical air mass intrusions is also important for melting. Based on the years with the greatest melt (2002 and 2012) during the MODIS era, the area-average temperature anomaly of 2 standard deviations above the 14 year June-July mean results in a melt fraction of 40% or more. Though the summer of 2007 had the most blocking days, atmospheric temperature anomalies were too small to instigate extreme melting. Short-term atmospheric blocking over Greenland contributes to melt episodesAssociated temperature anomalies are equally important for the meltDuration and strength of blocking events contribute to surface melt intensity.

Recalibration of the Shear Stress Transport Model to Improve Calculation of Shock Separated Flows

NASA Technical Reports Server (NTRS)

Georgiadis, Nicholas J.; Yoder, Dennis A.

2013-01-01

The Menter Shear Stress Transport (SST) k . turbulence model is one of the most widely used two-equation Reynolds-averaged Navier-Stokes turbulence models for aerodynamic analyses. The model extends Menter s baseline (BSL) model to include a limiter that prevents the calculated turbulent shear stress from exceeding a prescribed fraction of the turbulent kinetic energy via a proportionality constant, a1, set to 0.31. Compared to other turbulence models, the SST model yields superior predictions of mild adverse pressure gradient flows including those with small separations. In shock - boundary layer interaction regions, the SST model produces separations that are too large while the BSL model is on the other extreme, predicting separations that are too small. In this paper, changing a1 to a value near 0.355 is shown to significantly improve predictions of shock separated flows. Several cases are examined computationally and experimental data is also considered to justify raising the value of a1 used for shock separated flows.

Report on monitoring and support instruments for solar physics research from Spacelab

NASA Technical Reports Server (NTRS)

1978-01-01

The Quick Reaction and Special Purpose Facility Definition Team for Solar Physics Spacelab Payloads examined a variety of instruments to fulfill the following functions: (1) solar physics research appropriate to Spacelab, (2) correlative data for research in such fields as aeronomy, magnetospheric physics, ionospheric physics, meteorology and climatology, (3) target selection for activity alert monitoring and (4) pointing accuracy monitoring of Spacelab platforms. In this examination the team accepted a number of restrictions and qualifications: (1) the cost of such instruments must be low, so as not to adversely impact the development of new, research class instrumentation in the early Spacelab era; (2) the instruments should be of such a size that they each would occupy a small fraction of a pointing system, and (3) the weight and power consumption of the instruments should also be small. With these restrictions, the instruments chosen are: the visible light telescope and magnetograph, the extreme-ultraviolet telescope, and the solar irradiance monitor.

Novel All-Extremity High-Intensity Interval Training Improves Aerobic Fitness, Cardiac Function and Insulin Resistance in Healthy Older Adults

PubMed Central

Hwang, Chueh-Lung; Yoo, Jeung-Ki; Kim, Han-Kyul; Hwang, Moon-Hyon; Handberg, Eileen M.; Petersen, John W.; Christou, Demetra D.

2016-01-01

Aging is associated with decreased aerobic fitness and cardiac remodeling leading to increased risk for cardiovascular disease. High-intensity interval training (HIIT) on the treadmill has been reported to be more effective in ameliorating these risk factors compared with moderate-intensity continuous training (MICT) in patients with cardiometabolic disease. In older adults, however, weight-bearing activities are frequently limited due to musculoskeletal and balance problems. The purpose of this study was to examine the feasibility and safety of non-weight-bearing all-extremity HIIT in older adults. In addition, we tested the hypothesis that all-extremity HIIT will be more effective in improving aerobic fitness, cardiac function, and metabolic risk factors compared with all-extremity MICT. Fifty-one healthy sedentary older adults (age: 65±1 years) were randomized to HIIT (n=17), MICT (n=18) or non-exercise control (CONT; n=16). HIIT (4×4 minutes 90% of peak heart rate; HRpeak) and isocaloric MICT (70% of HRpeak) were performed on a non-weight-bearing all-extremity ergometer, 4x/week for 8 weeks under supervision. All-extremity HIIT was feasible in older adults and resulted in no adverse events. Aerobic fitness (peak oxygen consumption; VO2peak) and ejection fraction (echocardiography) improved by 11% (P<0.0001) and 4% (P=0.001) respectively in HIIT, while no changes were observed in MICT and CONT (P≥0.1). Greater improvements in ejection fraction were associated with greater improvements in VO2peak (r=0.57; P<0.0001). Insulin resistance (homeostatic model assessment) decreased only in HIIT by 26% (P=0.016). Diastolic function, body composition, glucose and lipids were unaffected (P≥0.1). In conclusion, all-extremity HIIT is feasible and safe in older adults. HIIT, but not MICT, improved aerobic fitness, ejection fraction, and insulin resistance. PMID:27346646

Novel all-extremity high-intensity interval training improves aerobic fitness, cardiac function and insulin resistance in healthy older adults.

PubMed

Hwang, Chueh-Lung; Yoo, Jeung-Ki; Kim, Han-Kyul; Hwang, Moon-Hyon; Handberg, Eileen M; Petersen, John W; Christou, Demetra D

2016-09-01

Aging is associated with decreased aerobic fitness and cardiac remodeling leading to increased risk for cardiovascular disease. High-intensity interval training (HIIT) on the treadmill has been reported to be more effective in ameliorating these risk factors compared with moderate-intensity continuous training (MICT) in patients with cardiometabolic disease. In older adults, however, weight-bearing activities are frequently limited due to musculoskeletal and balance problems. The purpose of this study was to examine the feasibility and safety of non-weight-bearing all-extremity HIIT in older adults. In addition, we tested the hypothesis that all-extremity HIIT will be more effective in improving aerobic fitness, cardiac function, and metabolic risk factors compared with all-extremity MICT. Fifty-one healthy sedentary older adults (age: 65±1years) were randomized to HIIT (n=17), MICT (n=18) or non-exercise control (CONT; n=16). HIIT (4×4min 90% of peak heart rate; HRpeak) and isocaloric MICT (70% of HRpeak) were performed on a non-weight-bearing all-extremity ergometer, 4×/week for 8weeks under supervision. All-extremity HIIT was feasible in older adults and resulted in no adverse events. Aerobic fitness (peak oxygen consumption; VO2peak) and ejection fraction (echocardiography) improved by 11% (P<0.0001) and 4% (P=0.001), respectively in HIIT, while no changes were observed in MICT and CONT (P≥0.1). Greater improvements in ejection fraction were associated with greater improvements in VO2peak (r=0.57; P<0.0001). Insulin resistance (homeostatic model assessment) decreased only in HIIT by 26% (P=0.016). Diastolic function, body composition, glucose and lipids were unaffected (P≥0.1). In conclusion, all-extremity HIIT is feasible and safe in older adults. HIIT, but not MICT, improved aerobic fitness, ejection fraction, and insulin resistance. Copyright © 2016 Elsevier Inc. All rights reserved.

Emergence of heat extremes attributable to anthropogenic influences

NASA Astrophysics Data System (ADS)

King, Andrew D.; Black, Mitchell T.; Min, Seung-Ki; Fischer, Erich M.; Mitchell, Daniel M.; Harrington, Luke J.; Perkins-Kirkpatrick, Sarah E.

2016-04-01

Climate scientists have demonstrated that a substantial fraction of the probability of numerous recent extreme events may be attributed to human-induced climate change. However, it is likely that for temperature extremes occurring over previous decades a fraction of their probability was attributable to anthropogenic influences. We identify the first record-breaking warm summers and years for which a discernible contribution can be attributed to human influence. We find a significant human contribution to the probability of record-breaking global temperature events as early as the 1930s. Since then, all the last 16 record-breaking hot years globally had an anthropogenic contribution to their probability of occurrence. Aerosol-induced cooling delays the timing of a significant human contribution to record-breaking events in some regions. Without human-induced climate change recent hot summers and years would be very unlikely to have occurred.

Prognostic value of proliferation in pleomorphic soft tissue sarcomas: a new look at an old measure.

PubMed

Seinen, Jojanneke M; Jönsson, Mats; Bendahl, Pär-Ola O; Baldetorp, Bo; Rambech, Eva; Åkerman, Måns; Rydholm, Anders; Nilbert, Mef; Carneiro, Ana

2012-12-01

Though proliferation has repeatedly shown a prognostic role in sarcomas, it has not reached clinical application. We performed a comprehensive evaluation of the prognostic role of 5 proliferation measures in a large series of soft tissue sarcomas of the extremities and the trunk wall. One hundred ninety-six primary soft tissue sarcomas of the extremities and the trunk wall were subjected to DNA flow cytometry for quantification of S-phase fraction and to immunohistochemical evaluation of Ki-67, Top2a, p21, and p27Kip1. In univariate analysis, positive expression of Ki-67 (hazard ratio = 4.5, CI = 1.6-12.1), Top2a (hazard ratio = 2.2, CI = 1.2-3.5) and high S-phase fraction (hazard ratio = 1.8, CI = 1.2-3.7) significantly correlated with risk for metastasis. When combined with currently used prognostic factors, Ki-67, S-phase fraction and Top2a fraction contributed to refined identification of prognostic risk groups. Proliferation, as assessed by expression of Ki-67 and Top2a and evaluation of S-phase fraction and applied to statistical decision-tree models, provides prognostic information in soft tissue sarcomas of the extremity and trunk wall. Though proliferation contributes independently to currently applied prognosticators, its role is particularly strong when few other factors are available, which suggests a role in preoperative decision-making related to identification of high-risk individuals who would benefit from neoadjuvant therapy. Copyright © 2012 Elsevier Inc. All rights reserved.

Questions on the existence, persistence, and mechanical effects of a very small melt fraction in the asthenosphere

NASA Astrophysics Data System (ADS)

Holtzman, Benjamin K.

2016-02-01

This paper integrates current questions in rock physics on the effects and behavior of very small melt fractions (≪1%) in the asthenosphere. In experiment and theory, it has been shown that a very small melt fraction forming a connected network has a large effect on the diffusion creep shear viscosity, as well as in the anelastic behavior. Because small concentrations of volatiles, particularly H2O and CO2, significantly lower the peridotite solidus, a small melt fraction is expected in the asthenosphere. Even with connected networks, permeability will be low and surface tension will generate a strong force resisting complete draining of small melt fractions. The anelastic reduction of shear velocity due to melt could cause a ≥5% shear velocity contrast across the solidus, consistent with the contrast measured on features in the shallow suboceanic upper mantle that are often interpreted as the lithosphere-asthenosphere boundary. This article was corrected on 12 MAR 2016. See the end of the full text for details.

Rare event simulation in radiation transport

DOE Office of Scientific and Technical Information (OSTI.GOV)

Kollman, Craig

1993-10-01

This dissertation studies methods for estimating extremely small probabilities by Monte Carlo simulation. Problems in radiation transport typically involve estimating very rare events or the expected value of a random variable which is with overwhelming probability equal to zero. These problems often have high dimensional state spaces and irregular geometries so that analytic solutions are not possible. Monte Carlo simulation must be used to estimate the radiation dosage being transported to a particular location. If the area is well shielded the probability of any one particular particle getting through is very small. Because of the large number of particles involved,more » even a tiny fraction penetrating the shield may represent an unacceptable level of radiation. It therefore becomes critical to be able to accurately estimate this extremely small probability. Importance sampling is a well known technique for improving the efficiency of rare event calculations. Here, a new set of probabilities is used in the simulation runs. The results are multiple by the likelihood ratio between the true and simulated probabilities so as to keep the estimator unbiased. The variance of the resulting estimator is very sensitive to which new set of transition probabilities are chosen. It is shown that a zero variance estimator does exist, but that its computation requires exact knowledge of the solution. A simple random walk with an associated killing model for the scatter of neutrons is introduced. Large deviation results for optimal importance sampling in random walks are extended to the case where killing is present. An adaptive ``learning`` algorithm for implementing importance sampling is given for more general Markov chain models of neutron scatter. For finite state spaces this algorithm is shown to give with probability one, a sequence of estimates converging exponentially fast to the true solution.« less

Extreme Ultraviolet Fractional Orbital Angular Momentum Beams from High Harmonic Generation

PubMed Central

Turpin, Alex; Rego, Laura; Picón, Antonio; San Román, Julio; Hernández-García, Carlos

2017-01-01

We investigate theoretically the generation of extreme-ultraviolet (EUV) beams carrying fractional orbital angular momentum. To this end, we drive high-order harmonic generation with infrared conical refraction (CR) beams. We show that the high-order harmonic beams emitted in the EUV/soft x-ray regime preserve the characteristic signatures of the driving beam, namely ringlike transverse intensity profile and CR-like polarization distribution. As a result, through orbital and spin angular momentum conservation, harmonic beams are emitted with fractional orbital angular momentum, and they can be synthesized into structured attosecond helical beams –or “structured attosecond light springs”– with rotating linear polarization along the azimuth. Our proposal overcomes the state of the art limitations for the generation of light beams far from the visible domain carrying non-integer orbital angular momentum and could be applied in fields such as diffraction imaging, EUV lithography, particle trapping, and super-resolution imaging. PMID:28281655

Hidden Charge States in Soft-X-Ray Laser-Produced Nanoplasmas Revealed by Fluorescence Spectroscopy

NASA Astrophysics Data System (ADS)

Schroedter, L.; Müller, M.; Kickermann, A.; Przystawik, A.; Toleikis, S.; Adolph, M.; Flückiger, L.; Gorkhover, T.; Nösel, L.; Krikunova, M.; Oelze, T.; Ovcharenko, Y.; Rupp, D.; Sauppe, M.; Wolter, D.; Schorb, S.; Bostedt, C.; Möller, T.; Laarmann, T.

2014-05-01

Highly charged ions are formed in the center of composite clusters by strong free-electron laser pulses and they emit fluorescence on a femtosecond time scale before competing recombination leads to neutralization of the nanoplasma core. In contrast to mass spectrometry that detects remnants of the interaction, fluorescence in the extreme ultraviolet spectral range provides fingerprints of transient states of high energy density matter. Spectra from clusters consisting of a xenon core and a surrounding argon shell show that a small fraction of the fluorescence signal comes from multiply charged xenon ions in the cluster core. Initially, these ions are as highly charged as the ions in the outer shells of pure xenon clusters with charge states up to at least 11+.

A new class of galactic discrete gamma ray sources: Chaotic winds of massive stars

NASA Technical Reports Server (NTRS)

Chen, Wan; White, Richard L.

1992-01-01

We propose a new class of galactic discrete gamma-ray sources, the chaotic, high mass-loss-rate winds from luminous early-type stars. Early-type stellar winds are highly unstable due to intrinsic line-driven instabilities, and so are permeated by numerous strong shocks. These shocks can accelerate a small fraction of thermal electrons and ions to relativistic energies via the first-order Fermi mechanism. A power-law-like photon spectrum extending from keV to above 10 MeV energies is produced by inverse Compton scattering of the extremely abundant stellar UV photons by the relativistic electrons. In addition, a typical pi(sup 0)-decay gamma-ray spectrum is generated by proton-ion interactions in the densest part of the winds.

The building stones of ancient Egypt a gift of its geology

NASA Astrophysics Data System (ADS)

Klemm, Dietrich D.; Klemm, Rosemarie

2001-08-01

Building stones and clay-rich Nile mud were ancient Egypt's main raw construction materials. While the mud was easily accessible along the Nile river valley, the immense quantities of the different stone materials used for construction of the famous pyramids, precious temples and tombs needed a systematic quarrying organization, well arranged transport logistics over extreme distances and a high standard of stone masonry. The petrography, occurrence, and main applications of the 11 most popular stone types used in ancient Egypt are described in this contribution. Rough estimates of the scale of this mining activity, based on the volume of many different ancient quarry sites, all over Egypt, reveal that the monuments known today represent only a small fraction of the amount of building stones mined during the long, ancient Egyptian history.

Active alignment/contact verification system

DOEpatents

Greenbaum, William M.

2000-01-01

A system involving an active (i.e. electrical) technique for the verification of: 1) close tolerance mechanical alignment between two component, and 2) electrical contact between mating through an elastomeric interface. For example, the two components may be an alumina carrier and a printed circuit board, two mating parts that are extremely small, high density parts and require alignment within a fraction of a mil, as well as a specified interface point of engagement between the parts. The system comprises pairs of conductive structures defined in the surfaces layers of the alumina carrier and the printed circuit board, for example. The first pair of conductive structures relate to item (1) above and permit alignment verification between mating parts. The second pair of conductive structures relate to item (2) above and permit verification of electrical contact between mating parts.

The Cubesat Heliospheric Imaging Experiment for Space Weather Prediction

NASA Astrophysics Data System (ADS)

DeForest, Craig; Howard, T.; Dickinson, J.; Epperly, M.; Kief, C.

2010-05-01

Heliospheric imaging data have been shown to improve space weather prediction by an order of magnitude, and heliospheric monitoring by the SMEI and STEREO-HI instruments have proven to be extremely useful for understanding heliospheric conditions near Earth. However, SMEI is approaching end-of-life and the STEREOs are drifting away from favorable Earth-viewing geometry just as the new solar cycle begins. CHIME is an innovative, miniaturized, fully functional space weather heliospheric monitor that fits within the 3U CubeSat envelope and can be flown individually (as a scientific or demonstrator mission) or in a swarm (to attain operational-class reliability) at a small fraction of the cost of a conventional mission. Here we describe the CHIME concept and its use with the automated processing pipeline AICMED to improve space weather prediction.

A Model of the Temporal Variability of Optical Light from Extrasolar Terrestrial Planets

NASA Astrophysics Data System (ADS)

Ford, E. B.; Seager, S.; Turner, E. L.

2001-05-01

New observatories such as TPF (NASA) and Darwin (ESA) are being designed to detect light directly from terrestrial-mass planets. Such observations will provide new data to constrain theories of planet formation and may identify the possible presence of liquid water and even spectroscopic signatures suggestive of life. We model the light scattered by Earth-like planets focusing on temporal variability due to planetary rotation and weather. Since a majority of the scattered light comes from only a small fraction of the planet's surface, significant variations in brightness are possible. The variations can be as large as a factor of two for a cloud-free planet which has a range of albedos similar to those of the different surfaces found on Earth. If a significant fraction of the observed light is scattered by the planet's atmosphere, including clouds, then the amplitude of variations due to surface features will be diluted. Atmospheric variability (e.g. clouds) itself is extremely interesting because it provides evidence for weather. The planet's rotation period, fractional ice and cloud cover, gross distribution of land and water on the surface, large scale weather patterns, large regions of unusual reflectivity or color (such as major desserts or vegetation's "red edge") as well as the geometry of its spin, orbit, and illumination relative to the observer all have substantial effects on the planet's rotational light curve.

Design Matters: Explorations of Content and Design in Fraction Games

ERIC Educational Resources Information Center

Gresalfi, Melissa Sommerfeld; Rittle-Johnson, Bethany; Loehr, Abbey; Nichols, Isaac

2018-01-01

The goal of the current study was to contribute to our emergent understanding of whether and how particular types of digital games can support student learning and engagement. We focused on commercially available educational apps that focused on similar content (fraction comparison and equivalence) but represented extremes in how game-like they…

Quantitative Detection of Small Molecule/DNA Complexes Employing a Force-Based and Label-Free DNA-Microarray

PubMed Central

Ho, Dominik; Dose, Christian; Albrecht, Christian H.; Severin, Philip; Falter, Katja; Dervan, Peter B.; Gaub, Hermann E.

2009-01-01

Force-based ligand detection is a promising method to characterize molecular complexes label-free at physiological conditions. Because conventional implementations of this technique, e.g., based on atomic force microscopy or optical traps, are low-throughput and require extremely sensitive and sophisticated equipment, this approach has to date found only limited application. We present a low-cost, chip-based assay, which combines high-throughput force-based detection of dsDNA·ligand interactions with the ease of fluorescence detection. Within the comparative unbinding force assay, many duplicates of a target DNA duplex are probed against a defined reference DNA duplex each. The fractions of broken target and reference DNA duplexes are determined via fluorescence. With this assay, we investigated the DNA binding behavior of artificial pyrrole-imidazole polyamides. These small compounds can be programmed to target specific dsDNA sequences and distinguish between D- and L-DNA. We found that titration with polyamides specific for a binding motif, which is present in the target DNA duplex and not in the reference DNA duplex, reliably resulted in a shift toward larger fractions of broken reference bonds. From the concentration dependence nanomolar to picomolar dissociation constants of dsDNA·ligand complexes were determined, agreeing well with prior quantitative DNAase footprinting experiments. This finding corroborates that the forced unbinding of dsDNA in presence of a ligand is a nonequilibrium process that produces a snapshot of the equilibrium distribution between dsDNA and dsDNA·ligand complexes. PMID:19486688

Laser Resurfacing: Full Field and Fractional.

PubMed

Pozner, Jason N; DiBernardo, Barry E

2016-07-01

Laser resurfacing is a very popular procedure worldwide. Full field and fractional lasers are used in many aesthetic practices. There have been significant advances in laser resurfacing in the past few years, which make patient treatments more efficacious and with less downtime. Erbium and carbon dioxide and ablative, nonablative, and hybrid fractional lasers are all extremely effective and popular tools that have a place in plastic surgery and dermatology offices. Copyright © 2016 Elsevier Inc. All rights reserved.

The Role of Management in Enrichment Ratio Dynamics and Resilience of Aggregate Fractions Via Raindrop Impact within Agricultural Hillslopes

NASA Astrophysics Data System (ADS)

Wacha, K.; Papanicolaou, T.; Hatfield, J.; Cambardella, C.; Abban, B. K.; Wilson, C. G.; Filley, T. R.; Hou, T.; Dold, C.

2017-12-01

The abundance and distribution of surface soil size fractions has been shown to be reflective of changes in management practices and landscape position. Soil size fractions exist in both un-aggregated and aggregated forms that differ in textural and biological composition, which can impact soil hydrology and aggregation processes. Soils with higher stocks of soil organic matter (SOM) promote higher biological activity, infiltration, and soil structure due to stronger, more resilient aggregates. Within ag-systems, intensive cultivation and steep gradients can negatively impact the formation/stability of aggregates and amplify erosion processes, which redistributes material along downslope flowpathways to varying degrees, based on the amount of available surface cover during a rainfall event. The innate variability in SOM composition found amongst the size fractions combined with these highly active flowpathways, produces a symphony of interactive biogeochemical and hydrologic processes, which promote spatial landscape heterogeneity. Due to this intricacy, accurately assessing changes in SOM stocks within high energy ag-systems is extremely challenging, and could greatly impact soil carbon budgets at the hillslope and greater spatial scales. To address this, in part, we utilize a systematic approach that isolates the role of management in building aggregate resilience to hydrologic forcing. Soil samples were collected from farm fields with varying slopes (1-20%) and management conditions, and then isolated into seven aggregate size fractions. Each aggregate fraction was tested for resilience to raindrop impact with corresponding SOM composition and biological activity. Rainfall simulations were conducted on plots under representative management and gradient to capture the dynamicity of the size fractions being transported during an applied rainfall event. Results found that small macroaggregate fractions were most indicative of changes in management, and erosion rates from plots were inversely proportional to SOM enrichment. These experiments not only promote our fundamental understanding on the dynamics of surface soil and SOM redistribution but also can provide guidance into best management practices that promote aggregate stability, decrease soil loss, and enhance soil health.

Interaction between fractional Josephson vortices in multi-gap superconductor tunnel junctions

NASA Astrophysics Data System (ADS)

Kim, Ju H.

In a long Josephson junction (LJJ) with two-band superconductors, fractionalization of Josephson vortices (fluxons) can occur in the broken time reversal symmetry state when spatial phase textures (i-solitons) are excited. Excitation of i-solitons in each superconductor layer of the junction, arising due to the presence of two condensates and the interband Josephson effect, leads to spatial variation of the critical current density between the superconductor layers. Similar to the situation in a YBa2 Cu3O7 - x superconductor film grain boundary, this spatial dependence of the crtitical current density can self-generate magnetic flux in the insulator layer, resulting in fractional fluxons with large and small fraction of flux quantum. Similar to fluxons in one-band superconductor LJJ, these fractional fluxons are found to interact with each other. The interaction between large and small fractional fluxons determines the size of a fluxon which includes two (one large and one small) fractional fluxons. We discuss the nature of interaction between fractional fluxons and suggest that i-soliton excitations in multi-gap superconductor LJJs may be probed by using magnetic flux measurements.

Antioxidant Capacities of Fractions of Bamboo Shaving Extract and Their Antioxidant Components.

PubMed

Gong, Jinyan; Huang, Jun; Xiao, Gongnian; Chen, Feng; Lee, Bolim; Ge, Qing; You, Yuru; Liu, Shiwang; Zhang, Ying

2016-07-30

This research was conducted for evaluation of antioxidant activities of four fractions from bamboo shavings extract (BSE) and their antioxidant components. The antioxidant capacities of BSE and four fractions on ABTS, DPPH, FRAP and total antioxidant capacity assays exhibited the following descending order: DF > n-butanol fraction (BF) > BSE ≈ ethyl acetate fraction (AF) > water fraction (WF). Among the identified phenolic compounds, caffeic acid exhibited the highest antioxidant capacities on DPPH, FRAP and total antioxidant capacity assays. An extremely significant positive correlation between the antioxidant activities with the contents of total flavonoids, total phenolic acids, or total phenolics was observed in this study. The result indicated that the bamboo shaving extract and its solvent fractions could act as natural antioxidants in light of their potent antioxidant activities.

Heavily reddened quasars at z ˜ 2 in the UKIDSS Large Area Survey: a transitional phase in AGN evolution

NASA Astrophysics Data System (ADS)

Banerji, Manda; McMahon, Richard G.; Hewett, Paul C.; Alaghband-Zadeh, Susannah; Gonzalez-Solares, Eduardo; Venemans, Bram P.; Hawthorn, Melanie J.

2012-12-01

We present a new sample of purely near-infrared-selected KVega < 16.5 [KAB < 18.4] extremely red [(J - K)Vega > 2.5] quasar candidates at z ˜ 2 from ≃900 deg2 of data in the UKIDSS Large Area Survey (LAS). Five of these are spectroscopically confirmed to be heavily reddened type 1 active galactic nuclei (AGN) with broad emission lines bringing our total sample of reddened quasars from the UKIDSS-LAS to 12 at z = 1.4-2.7. At these redshifts, Hα (6563 Å) is in the K band. However, the mean Hα equivalent width of the reddened quasars is only 10 per cent larger than that of the optically selected population and cannot explain the extreme colours. Instead, dust extinction of AV ˜ 2-6 mag is required to reproduce the continuum colours of our sources. This is comparable to the dust extinctions seen in submillimetre galaxies at similar redshifts. We argue that the AGN are likely being observed in a relatively short-lived breakout phase when they are expelling gas and dust following a massive starburst, subsequently turning into UV-luminous quasars. Some of our quasars show direct evidence for strong outflows (v ˜ 800-1000 km s-1) affecting the Hα line consistent with this scenario. We predict that a larger fraction of reddened quasar hosts are likely to be submillimetre bright compared to the UV-luminous quasar population. We use our sample to place new constraints on the fraction of obscured type 1 AGN likely to be missed in optical surveys. Taken at face value our findings suggest that the obscured fraction depends on quasar luminosity. The space density of obscured quasars is approximately five times that inferred for UV-bright quasars from the Sloan Digital Sky Survey (SDSS) luminosity function at Mi < -30 but seems to drop at lower luminosities even accounting for various sources of incompleteness in our sample. We find that at Mi ˜ -28 for example, this fraction is unlikely to be larger than ˜20 per cent although these fractions are highly uncertain at present due to the small size of our sample. A deeper K-band survey for highly obscured quasars is clearly needed to test this hypothesis fully and is now becoming possible with new sensitive all-sky infrared surveys such as the VISTA Hemisphere Survey and the Wide Infrared Survey Explorer (WISE) All Sky Survey.

Release of small phenolic compounds from brewer's spent grain and its lignin fractions by human intestinal microbiota in vitro.

PubMed

Aura, Anna-Marja; Niemi, Piritta; Mattila, Ismo; Niemelä, Klaus; Smeds, Annika; Tamminen, Tarja; Faulds, Craig; Buchert, Johanna; Poutanen, Kaisa

2013-10-09

Brewer's spent grain (BSG), the major side-stream from brewing, is rich in protein, lignin, and nonstarch polysaccharides. Lignin is a polyphenolic macromolecule considered resilient toward breakdown and utilization by colon microbiota, although some indications of release of small phenolic components from lignin in animals have been shown. The aim of this study was to investigate if the human intestinal microbiota can release lignans and small phenolic compounds from whole BSG, a lignin-enriched insoluble fraction from BSG and a deferuloylated fraction, in a metabolic in vitro colon model. The formation of short-chain fatty acid (SCFA) was also investigated. More lignin-related monomers and dilignols were detected from the lignin-enriched fraction than from BSG or deferuloylated BSG. SCFA formation was not suppressed by any of the fractions. It was shown that small lignin-like compounds were released from these samples in the in vitro colon model, originating most likely from lignin.

A rational decision rule with extreme events.

PubMed

Basili, Marcello

2006-12-01

Risks induced by extreme events are characterized by small or ambiguous probabilities, catastrophic losses, or windfall gains. Through a new functional, that mimics the restricted Bayes-Hurwicz criterion within the Choquet expected utility approach, it is possible to represent the decisionmaker behavior facing both risky (large and reliable probability) and extreme (small or ambiguous probability) events. A new formalization of the precautionary principle (PP) is shown and a new functional, which encompasses both extreme outcomes and expectation of all the possible results for every act, is claimed.

[Analytical chemistry in works of Maria Skłodowska-Curie].

PubMed

Hulanicki, Adam

2012-01-01

Maria Skłodowska-Curie--a Nobel Prize winner in chemistry--the elements of learning of chemistry gained just by a dint of work of more than ten months in Warsaw in the Institute of Industry and Agriculture Museum. The Nobel Prize concerned a contribution to the progress of chemistry through the discovery of radium and polonium, separation of radium and study of properties of this amazing element. It was awarded for an extremely arduous work, during which the chemical reactions being the principles of analytical chemistry were realized. Unlike to a typical analytical procedure, an initial attempt here was the thousands of kilograms of uranium ore: pitchblende. The final effect was small amounts of new elements: polonium and radium. Both the knowledge and the intuition of the researcher let her have a triumph. The difficulties she experienced because the properties of the searched chemical elements could only be evaluated thanks to the knowledge on other chemical elements. A significant achievement was the determination of the samples by means of radioactivity measurement, which gave rise to radiochemical analytical methods. An extreme analytical precision was demanded in multiple processes of fractional crystallization and precipitation which finally led to the calculation of the atomic mass of radium.

Aerosol cloud interactions in southeast Pacific stratocumulus: satellite observations, in situ data and regional modeling

NASA Astrophysics Data System (ADS)

George, Rhea

The influence of anthropogenic aerosols on cloud radiative properties in the persistent southeast Pacific stratocumulus deck is investigated using MODIS satellite observations, in situ data from the VAMOS Ocean-Cloud-Atmosphere-Land Study Regional Experiment (VOCALS-REx), and WRF-Chem, a regional model with interactive chemistry and aerosols. An albedo proxy is derived based on the fractional coverage of low cloud (a macrophysical field) and the cloud albedo, with the latter broken down into contributions from microphysics (cloud droplet concentration, Nd and macrophysics (liquid water path). Albedo variability is dominated by low cloud fraction variability, except within 10-15° of the South American coast, where cloud albedo variability contributes significantly. Covariance between cloud fraction and cloud albedo also contributes significantly to the variance in albedo, which highlights how complex and inseparable the factors controlling albedo are. N d variability contributes only weakly, which emphasizes that attributing albedo variability to the indirect effects of aerosols against the backdrop of natural meteorological variability is extremely challenging. Specific cases of aerosol changes can have strong impacts on albedo. We identify a pathway for periodic anthropogenic aerosol transport to the unpolluted marine stratocumulus >1000 km offshore, which strongly enhances Nd and albedo in zonally-elongated 'hook'-shaped arc. Hook development occurs with Nd increasing to polluted levels over the remote ocean primarily due to entrainment of a large number of small aerosols from the free troposphere that contribute a relatively small amount of aerosol mass to the marine boundary layer. Strong, deep offshore flow needed to transport continental aerosols to the remote ocean is favored by a trough approaching the South American coast and a southeastward shift of the climatological subtropical high pressure system. DMS significantly influences the aerosol number and size distributions, but does not cause hooks. The Twomey effect contributes 50-80% of the total aerosol indirect effect (AIE) both near sources and offshore during hook events. Meteorological variability between simulations can swamp the signal of AIEs, particularly due to the binary model cloud fraction field and distinguishing AIE requires determination of appropriate spatial and temporal averaging scales over which AIE is significant above this noise.

High δ56Fe values in Samoan basalts

NASA Astrophysics Data System (ADS)

Konter, J. G.; Pietruszka, A. J.; Hanan, B. B.; Finlayson, V.

2014-12-01

Fe isotope fractionation spans ~0-0.4 permil in igneous systems, which cannot all be attributed to variable source compositions since peridotites barely overlap these compositions. Other processes may fractionate Fe isotopes such as variations in the degree of partial melting, magmatic differentiation, fluid addition related to the final stages of melt evolution, and kinetic fractionation related to diffusion. An important observation in igneous systems is the trend of increasing Fe isotope values against an index of magmatic fractionation (e.g. SiO2; [1]). The data strongly curve from δ56Fe >0.3 permil for SiO2 >70 wt% down to values around 0.09 permil from ~65 wt% down to 40 wt% SiO2 of basalts. However, ocean island basalts (OIBs) have a slightly larger δ56Fe variability than mid ocean ridge basalts (MORBs; [e.g. 2]). We present Fe isotope data on samples from the Samoan Islands (OIB) that have unusually high δ56Fe values for their SiO2 content. We rule out alteration by using fresh samples, and further test for the effects of magmatic processes on the δ56Fe values. In order to model the largest possible fractionation, unusually small degrees of melting with extreme fractionation factors are modeled with fractional crystallization of olivine alone, but such processing fails to fractionate the Fe isotopes to the observed values. Moreover, Samoan lavas likely also fractionated clinopyroxene, and its lower fractionation factor would limit the final δ56Fe value of the melt. We therefore suggest the mantle source of Samoan lavas must have had unusually high δ56Fe. However, there is no clear correlation with the highly radiogenic isotope signatures that reflect the unique source compositions of Samoa. Instead, increasing melt extraction correlates with lower δ56Fe values in peridotites assumed to be driven by the preference for the melt phase by heavy Fe3+, while high values may be related to metasomatism [3]. The latter would be in line with metasomatized xenoliths from Samoa [4]. [1] Heimann et al., 2008, doi:10.1016/j.gca.2008.06.009 [2] Teng et al., 2013, doi:10.1016/j.gca.2012.12.027 [3] Williams et al., 2004, doi: 10.1126/science.1095679 [4] Hauri et al., 1993, doi: 10.1038/365221a0

Estimating Perturbation and Meta-Stability in the Daily Attendance Rates of Six Small High Schools

NASA Astrophysics Data System (ADS)

Koopmans, Matthijs

This paper discusses the daily attendance rates in six small high schools over a ten-year period and evaluates how stable those rates are. “Stability” is approached from two vantage points: pulse models are fitted to estimate the impact of sudden perturbations and their reverberation through the series, and Autoregressive Fractionally Integrated Moving Average (ARFIMA) techniques are used to detect dependencies over the long range of the series. The analyses are meant to (1) exemplify the utility of time series approaches in educational research, which lacks a time series tradition, (2) discuss some time series features that seem to be particular to daily attendance rate trajectories such as the distinct downward pull coming from extreme observations, and (3) present an analytical approach to handle the important yet distinct patterns of variability that can be found in these data. The analysis also illustrates why the assumption of stability that underlies the habitual reporting of weekly, monthly and yearly averages in the educational literature is questionable, as it reveals dynamical processes (perturbation, meta-stability) that remain hidden in such summaries.

Generating Health Estimates by Zip Code: A Semiparametric Small Area Estimation Approach Using the California Health Interview Survey.

PubMed

Wang, Yueyan; Ponce, Ninez A; Wang, Pan; Opsomer, Jean D; Yu, Hongjian

2015-12-01

We propose a method to meet challenges in generating health estimates for granular geographic areas in which the survey sample size is extremely small. Our generalized linear mixed model predicts health outcomes using both individual-level and neighborhood-level predictors. The model's feature of nonparametric smoothing function on neighborhood-level variables better captures the association between neighborhood environment and the outcome. Using 2011 to 2012 data from the California Health Interview Survey, we demonstrate an empirical application of this method to estimate the fraction of residents without health insurance for Zip Code Tabulation Areas (ZCTAs). Our method generated stable estimates of uninsurance for 1519 of 1765 ZCTAs (86%) in California. For some areas with great socioeconomic diversity across adjacent neighborhoods, such as Los Angeles County, the modeled uninsured estimates revealed much heterogeneity among geographically adjacent ZCTAs. The proposed method can increase the value of health surveys by providing modeled estimates for health data at a granular geographic level. It can account for variations in health outcomes at the neighborhood level as a result of both socioeconomic characteristics and geographic locations.

Microfluidic approaches to malaria detection

PubMed Central

Gascoyne, Peter; Satayavivad, Jutamaad; Ruchirawat, Mathuros

2009-01-01

Microfluidic systems are under development to address a variety of medical problems. Key advantages of micrototal analysis systems based on microfluidic technology are the promise of small size and the integration of sample handling and measurement functions within a single, automated device having low mass-production costs. Here, we review the spectrum of methods currently used to detect malaria, consider their advantages and disadvantages, and discuss their adaptability towards integration into small, automated micro total analysis systems. Molecular amplification methods emerge as leading candidates for chip-based systems because they offer extremely high sensitivity, the ability to recognize malaria species and strain, and they will be adaptable to the detection of new genotypic signatures that will emerge from current genomic-based research of the disease. Current approaches to the development of chip-based molecular amplification are considered with special emphasis on flow-through PCR, and we present for the first time the method of malaria specimen preparation by dielectrophoretic field-flow-fractionation. Although many challenges must be addressed to realize a micrototal analysis system for malaria diagnosis, it is concluded that the potential benefits of the approach are well worth pursuing. PMID:14744562

Definitive Radiotherapy for Ewing Tumors of Extremities and Pelvis: Long-Term Disease Control, Limb Function, and Treatment Toxicity

DOE Office of Scientific and Technical Information (OSTI.GOV)

Indelicato, Daniel J.; Keole, Sameer R.; Shahlaee, Amir H.

2008-11-01

Purpose: More than 70% of Ewing tumors occur in the extremities and pelvis. This study identified factors influencing local control and functional outcomes after management with definitive radiotherapy (RT). Patients and Methods: A total of 75 patients with a localized Ewing tumor of the extremity or pelvis were treated with definitive RT at the University of Florida between 1970 and 2006 (lower extremity tumors in 30, pelvic tumors in 26, and upper extremity tumors in 19). RT was performed on a once-daily (40%) or twice-daily (60%) basis. The median dose was 55.2 Gy in 1.8-Gy daily fractions or 55.0 Gymore » in 1.2-Gy twice-daily fractions. The median observed follow-up was 4.7 years. Functional outcome was assessed using the Toronto Extremity Salvage Score. Results: The 10-year actuarial overall survival, cause-specific survival, freedom from relapse, and local control rate was 48%, 48%, 42%, and 71%, respectively. Of the 72 patients, 3 required salvage amputation. Inferior cause-specific survival was associated with larger tumors (81% for tumors <8 cm vs. 39% for tumors {>=}8 cm, p <0.05). No patient characteristics or treatment variables were predictive of local failure. No fractures occurred in patients treated with hyperfractionation or with tumors of the distal extremities. Severe late complications were more frequently associated with use of <8-MV photons and fields encompassing the entire bone or hemipelvis. A significantly better Toronto Extremity Salvage Score was associated with a late-effect biologically effective dose of <91.7 Gy{sub 3}. Conclusions: Limb preservation was effectively achieved through definitive RT. Treating limited field sizes with hyperfractionated high-energy RT could minimize long-term complications and provides superior functional outcomes.« less

Growth and dissolution of an encapsulated contrast microbubble: effects of encapsulation permeability

PubMed Central

Sarkar, Kausik; Katiyar, Amit; Jain, Pankaj

2009-01-01

Gas diffusion from an encapsulated microbubble is modeled using an explicit linear relation for gas permeation through the encapsulation. Both the cases of single gas (air) and multiple gases (perfluorocarbon inside the bubble and air dissolved in surrounding liquid) are considered. An analytical expression for the dissolution time for an encapsulated air bubble is obtained; it showed that for small permeability the dissolution time increases linearly with decreasing permeability. A perfluorocarbon-filled contrast microbubble such as Definity was predicted to experience a transient growth due to air infusion before it dissolves in conformity with previous experimental findings. The growth phase occurs only for bubbles with a critical value of initial partial mole fraction of perfluorocarbon relative to air. With empirically obtained property values, the dissolution time of a 2.5 micron diameter (same as that of Definity) lipid coated octafluoropropane bubble with surface tension 25 mN/m predicts a lifetime of 42 minutes in an air saturated medium. The properties such as shell permeability, surface tension, relative mole fraction of octafluoropropane are varied to investigate their effects on the time scales of bubble growth and dissolution including their asymptotic scalings where appropriate. The dissolution dynamics scales with permeability, in that when the time is nondimensioanlized with permeability, curves for different permeabilities collapse on a single curve. Investigation of bubbles filled with other gases (non-octafluoropropane perfluorocarbon and sulfur hexafluoride) indicates longer dissolution time due to lower solubility and lower diffusivity for larger gas molecules. For such micron size encapsulated bubbles, lifetime of hours is possible only at extremely low surface tension (<1mN/m) or at extreme oversaturation. PMID:19616160

Controls on the Transition Metal Isotopic Composition of Seawater: Diatom Culture Experiments

NASA Astrophysics Data System (ADS)

Vance, D.; Archer, C.; Kennaway, G.; Cox, E.; Statham, P. J.

2004-12-01

Many transition metals are essential micronutrients for marine phytoplankton. As a result the expectation is that biological processes play an important, perhaps a dominant, role in their marine isotope geochemistry. These observations raise the prospect of using isotope records to trace transition metal micronutrient usage in the past oceans, an issue that is of importance to the efficiency of the biological pump and atmospheric carbon dioxide. As such, the characterisation of trace metal isotopic fractionations associated with marine primary productivity are an important scientific goal. Here we report fractionations associated with Fe, Cu and Zn sequestration by diatoms, one of the main primary producers in the oceans. Axenic unialgal cultures of Thalassiosira weissflogii and Thalassiosira pseudonana were established in artificial seawater + F/2 medium at 18° C on a 16:8 light:dark cycle. The cultures were filtered to separate diatom material from residual media and analysed for Zn, Cu and Fe concentrations and isotope composition using techniques described elsewhere1,2. Aliquots of the starting medium were also measured for each batch of cultures. The diatom organic material shows small, but consistent and resolvable, positive fractionations (0.1-0.3 per mil) for Fe, Cu and Zn relative to the starting medium. In the case of all three metals, but particularly for Zn (70-95% depending on experiment size), the diatoms had sequestered a large proportion of the available metal, suggesting that the fractionation factor for metal usage by the diatoms is much greater than 1.0001 to 1.0003. Time-series experiments are under way to determine the exact magnitude of the fractionation factor. The mass-balance is supported by the fact that the residual medium is around -0.4 per mil for Zn. The fact that diatoms incorporate trace metals that are isotopically heavier than the nutrient pool is a surprising result, the expectation having been that, as with carbon, the biological usage of trace metals would result in kinetic fractionations3. The positive fractionations necessitate an equilibrium process and, perhaps, active extra-cellular sequestration of trace metals. The second broader implication is that given the proposed role of diatoms in controlling the extreme depletion of Zn in open ocean surface waters, particularly in the Pacific where surface waters are have up to a factor of 250 less Zn than deep waters4, the depletion of the light isotope in surface waters and its enrichment in deep waters are predicted to be extreme. Zn, and other trace metal, isotopes may have an important role in recording this process in the past oceans. 1 C. Archer and D. Vance, 2004, J. Anal. Atom. Spectr. 19, 656-665. 2 J. Bermin, et al., 2004, this volume. 3 Pichat, S et al., 2003, Earth Planet. Sci. Lett. 210, 167-178. 4 Lohan, M.C. et al., 2002, Deep-Sea Res. II 49, 5793-5808.

Steering attosecond electron wave packets with light.

PubMed

Kienberger, R; Hentschel, M; Uiberacker, M; Spielmann, Ch; Kitzler, M; Scrinzi, A; Wieland, M; Westerwalbesloh, Th; Kleineberg, U; Heinzmann, U; Drescher, M; Krausz, F

2002-08-16

Photoelectrons excited by extreme ultraviolet or x-ray photons in the presence of a strong laser field generally suffer a spread of their energies due to the absorption and emission of laser photons. We demonstrate that if the emitted electron wave packet is temporally confined to a small fraction of the oscillation period of the interacting light wave, its energy spectrum can be up- or downshifted by many times the laser photon energy without substantial broadening. The light wave can accelerate or decelerate the electron's drift velocity, i.e., steer the electron wave packet like a classical particle. This capability strictly relies on a sub-femtosecond duration of the ionizing x-ray pulse and on its timing to the phase of the light wave with a similar accuracy, offering a simple and potentially single-shot diagnostic tool for attosecond pump-probe spectroscopy.

Stellar Magnetism, Winds and their Effects on Planetary Environments

NASA Astrophysics Data System (ADS)

Vidotto, A. A.

2016-08-01

Here, I review some recent works on magnetism of cool, main-sequence stars, their winds and potential impact on surrounding exoplanets. The winds of these stars are very tenuous and persist during their lifetime. Although carrying just a small fraction of the stellar mass, these magnetic winds carry away angular momentum, thus regulating the rotation of the star. Since cool stars are likely to be surrounded by planets, understanding the host star winds and magnetism is a key step towards characterisation of exoplanetary environments. As rotation and activity are intimately related, the spin down of stars leads to a decrease in stellar activity with age. As a consequence, as stars age, a decrease in high-energy (X-ray, extreme ultraviolet) irradiation is observed, which can a ect the evaporation of exoplanetary atmospheres and, thus, also altering exoplanetary evolution.

Production of extreme-purity aluminum and silicon by fractional crystallization processing

NASA Astrophysics Data System (ADS)

Dawless, R. K.; Troup, R. L.; Meier, D. L.; Rohatgi, A.

1988-06-01

Large scale fractional crystallization is used commercially at Alcoa to produce extreme purity aluminum (99.999+% Al). The primary market is sputtering targets used to make interconnects for integrated circuits. For some applications the impurities uranium and thorium are reduced to less than 1 ppbw to avoid "soft errors" associated with α particle emission. The crystallization process achieves segregation coefficients which are close to theoretical at normal yields, and this, coupled with the scale of the units, allows practical production of this material. The silicon purification process involves crystallization of Si from molten aluminum alloys containing about 30% silicon. The crystallites from this process are further treated to remove residual Al and an extreme purity ingot is obtained. This material is considered suitable for single crystal or ribbon type photovoltaic cells and for certain IC applications, including highly doped substrates used for epitaxial growth. In production of both extreme purity Al and Si, impurities are rejected to the remaining melt as the crystals form and some separation is achieved by draining this downgraded melt from the unit. Purification of this downgrade by crystallization has also been demonstrated for both systems and is important for achieving high recoveries.

Nonlinear electroelastic deformations of dielectric elastomer composites: II - Non-Gaussian elastic dielectrics

NASA Astrophysics Data System (ADS)

Lefèvre, Victor; Lopez-Pamies, Oscar

2017-02-01

This paper presents an analytical framework to construct approximate homogenization solutions for the macroscopic elastic dielectric response - under finite deformations and finite electric fields - of dielectric elastomer composites with two-phase isotropic particulate microstructures. The central idea consists in employing the homogenization solution derived in Part I of this work for ideal elastic dielectric composites within the context of a nonlinear comparison medium method - this is derived as an extension of the comparison medium method of Lopez-Pamies et al. (2013) in nonlinear elastostatics to the coupled realm of nonlinear electroelastostatics - to generate in turn a corresponding solution for composite materials with non-ideal elastic dielectric constituents. Complementary to this analytical framework, a hybrid finite-element formulation to construct homogenization solutions numerically (in three dimensions) is also presented. The proposed analytical framework is utilized to work out a general approximate homogenization solution for non-Gaussian dielectric elastomers filled with nonlinear elastic dielectric particles that may exhibit polarization saturation. The solution applies to arbitrary (non-percolative) isotropic distributions of filler particles. By construction, it is exact in the limit of small deformations and moderate electric fields. For finite deformations and finite electric fields, its accuracy is demonstrated by means of direct comparisons with finite-element solutions. Aimed at gaining physical insight into the extreme enhancement in electrostriction properties displayed by emerging dielectric elastomer composites, various cases wherein the filler particles are of poly- and mono-disperse sizes and exhibit different types of elastic dielectric behavior are discussed in detail. Contrary to an initial conjecture in the literature, it is found (inter alia) that the isotropic addition of a small volume fraction of stiff (semi-)conducting/high-permittivity particles to dielectric elastomers does not lead to the extreme electrostriction enhancements observed in experiments. It is posited that such extreme enhancements are the manifestation of interphasial phenomena.

Analytical approximation for the Einstein-dilaton-Gauss-Bonnet black hole metric

NASA Astrophysics Data System (ADS)

Kokkotas, K. D.; Konoplya, R. A.; Zhidenko, A.

2017-09-01

We construct an analytical approximation for the numerical black hole metric of P. Kanti et al. [Phys. Rev. D 54, 5049 (1996), 10.1103/PhysRevD.54.5049] in the four-dimensional Einstein-dilaton-Gauss-Bonnet (EdGB) theory. The continued fraction expansion in terms of a compactified radial coordinate, used here, converges slowly when the dilaton coupling approaches its extremal values, but for a black hole far from the extremal state, the analytical formula has a maximal relative error of a fraction of one percent already within the third order of the continued fraction expansion. The suggested analytical representation of the numerical black hole metric is relatively compact and a good approximation in the whole space outside the black hole event horizon. Therefore, it can serve in the same way as an exact solution when analyzing particles' motion, perturbations, quasinormal modes, Hawking radiation, accreting disks, and many other problems in the vicinity of a black hole. In addition, we construct the approximate analytical expression for the dilaton field.

Evolutionary Strategies of Viruses, Bacteria and Archaea in Hydrothermal Vent Ecosystems Revealed through Metagenomics

PubMed Central

Anderson, Rika E.; Sogin, Mitchell L.; Baross, John A.

2014-01-01

The deep-sea hydrothermal vent habitat hosts a diverse community of archaea and bacteria that withstand extreme fluctuations in environmental conditions. Abundant viruses in these systems, a high proportion of which are lysogenic, must also withstand these environmental extremes. Here, we explore the evolutionary strategies of both microorganisms and viruses in hydrothermal systems through comparative analysis of a cellular and viral metagenome, collected by size fractionation of high temperature fluids from a diffuse flow hydrothermal vent. We detected a high enrichment of mobile elements and proviruses in the cellular fraction relative to microorganisms in other environments. We observed a relatively high abundance of genes related to energy metabolism as well as cofactors and vitamins in the viral fraction compared to the cellular fraction, which suggest encoding of auxiliary metabolic genes on viral genomes. Moreover, the observation of stronger purifying selection in the viral versus cellular gene pool suggests viral strategies that promote prolonged host integration. Our results demonstrate that there is great potential for hydrothermal vent viruses to integrate into hosts, facilitate horizontal gene transfer, and express or transfer genes that manipulate the hosts’ functional capabilities. PMID:25279954

The Lyman Continuum Escape Fraction of Emission Line-selected z ∼ 2.5 Galaxies Is Less Than 15%

DOE Office of Scientific and Technical Information (OSTI.GOV)

Rutkowski, Michael J.; Hayes, Matthew; Scarlata, Claudia

Recent work suggests that strong emission line, star-forming galaxies (SFGs) may be significant Lyman continuum leakers. We combine archival Hubble Space Telescope broadband ultraviolet and optical imaging (F275W and F606W, respectively) with emission line catalogs derived from WFC3 IR G141 grism spectroscopy to search for escaping Lyman continuum (LyC) emission from homogeneously selected z ∼ 2.5 SFGs. We detect no escaping Lyman continuum from SFGs selected on [O ii] nebular emission ( N = 208) and, within a narrow redshift range, on [O iii]/[O ii]. We measure 1 σ upper limits to the LyC escape fraction relative to the non-ionizingmore » UV continuum from [O ii] emitters, f {sub esc} ≲ 5.6%, and strong [O iii]/[O ii] > 5 ELGs, f {sub esc} ≲ 14.0%. Our observations are not deep enough to detect f {sub esc} ∼ 10% typical of low-redshift Lyman continuum emitters. However, we find that this population represents a small fraction of the star-forming galaxy population at z ∼ 2. Thus, unless the number of extreme emission line galaxies grows substantially to z ≳ 6, such galaxies may be insufficient for reionization. Deeper survey data in the rest-frame ionizing UV will be necessary to determine whether strong line ratios could be useful for pre-selecting LyC leakers at high redshift.« less

Estimation of evapotranspiration in an arid region by remote sensing—A case study in the middle reaches of the Heihe River Basin

NASA Astrophysics Data System (ADS)

Li, Xingmin; Lu, Ling; Yang, Wenfeng; Cheng, Guodong

2012-07-01

Estimating surface evapotranspiration is extremely important for the study of water resources in arid regions. Data from the National Oceanic and Atmospheric Administration's Advanced Very High Resolution Radiometer (NOAA/AVHRR), meteorological observations and data obtained from the Watershed Allied Telemetry Experimental Research (WATER) project in 2008 are applied to the evaporative fraction model to estimate evapotranspiration over the Heihe River Basin. The calculation method for the parameters used in the model and the evapotranspiration estimation results are analyzed and evaluated. The results observed within the oasis and the banks of the river suggest that more evapotranspiration occurs in the inland river basin in the arid region from May to September. Evapotranspiration values for the oasis, where the land surface types and vegetations are highly variable, are relatively small and heterogeneous. In the Gobi desert and other deserts with little vegetation, evapotranspiration remains at its lowest level during this period. These results reinforce the conclusion that rational utilization of water resources in the oasis is essential to manage the water resources in the inland river basin. In the remote sensing-based evapotranspiration model, the accuracy of the parameter estimate directly affects the accuracy of the evapotranspiration results; more accurate parameter values yield more precise values for evapotranspiration. However, when using the evaporative fraction to estimate regional evapotranspiration, better calculation results can be achieved only if evaporative fraction is constant in the daytime.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Farrah, Duncan; Petty, Sara; Connolly, Brian

We present Hubble Space Telescope WFC3 F160W imaging and infrared spectral energy distributions for 12 extremely luminous, obscured active galactic nuclei (AGNs) at 1.8 < z < 2.7 selected via “hot, dust-obscured” mid-infrared colors. Their infrared luminosities span (2–15) × 10{sup 13} L {sub ⊙}, making them among the most luminous objects in the universe at z ∼ 2. In all cases, the infrared emission is consistent with arising at least for the most part from AGN activity. The AGN fractional luminosities are higher than those in either submillimeter galaxies or AGNs selected via other mid-infrared criteria. Adopting the Gmore » , M {sub 20}, and A morphological parameters, together with traditional classification boundaries, infers that three-quarters of the sample are mergers. Our sample does not, however, show any correlation between the considered morphological parameters and either infrared luminosity or AGN fractional luminosity. Moreover, the asymmetries and effective radii of our sample are distributed identically to those of massive galaxies at z ∼ 2. We conclude that our sample is not preferentially associated with mergers, though a significant merger fraction is still plausible. Instead, we propose that our sample includes examples of the massive galaxy population at z ∼ 2 that harbor a briefly luminous, “flickering” AGN and in which the G and M {sub 20} values have been perturbed due to either the AGN and/or the earliest formation stages of a bulge in an inside-out manner. Furthermore, we find that the mass assembly of the central black holes in our sample leads the mass assembly of any bulge component. Finally, we speculate that our sample represents a small fraction of the immediate antecedents of compact star-forming galaxies at z ∼ 2.« less

Advanced film-forming gel formula vs spring thermal water and white petrolatum as primary dressings after full-face ablative fractional CO2 laser resurfacing: a comparative split-face pilot study.

PubMed

Marini, L

2018-01-01

Aesthetically pleasing results and fast, uneventful recovery are highly desirable after rejuvenating ablative laser procedures. Wound dressings following ablative laser procedures should ideally improve and optimize the wound healing environment. The purpose of this comparative split-face, single-blinded, prospective observational study was to assess the efficacy and acceptability of two primary wound dressings immediately after a full-face fractional CO 2 laser resurfacing procedure. The assessments of an innovative film-forming dressing called Stratacel (SC) vs spring thermal water + Vaseline (V+) were conducted after a standardized, single-pass, full-face ablative fractional CO 2 laser skin resurfacing procedure. Clinical parameters, such as haemoglobin - HB; surface temperature - ST; micro-textural modifications - MT; superficial melanin - M; intrafollicular porphyrins - P, were assessed at different phases of the healing process using standardized, non-invasive technologies. Five female volunteers were enrolled in this inpatient, controlled pilot study. Most of the clinical parameters considered, including 3D surface texture analysis, revealed a better performance of SC vs. V+ during the early, more delicate phases of the healing process. This preliminary study, even if performed on a small number of volunteers, confirmed a definite advantage of the tested semipermeable film-forming formula (SC) over a more conventional postoperative skin care regime (V+). Clinical results could be explained by a better uniformity of distribution of SC over the micro-irregularities induced by ablative fractional CO 2 laser resurfacing. Its thin, semipermeable film might, in fact, act as an efficient, perfectly biocompatible, full contact, temporary skin barrier, able to protect extremely delicate healing surfaces from potential environmental irritations. © 2017 European Academy of Dermatology and Venereology.

Small scale heterogeneity of Phanerozoic lower crust: evidence from isotopic and geochemical systematics of mid-Cretaceous granulite gneisses, San Gabriel Mountains, southern California

USGS Publications Warehouse

Barth, A.P.; Wooden, J.L.; May, D.J.

1992-01-01

An elongate belt of mid-Cretaceous, compositionally banded gneisses and granulites is exposed in Cucamonga terrane, in the southeastern foothills of the San Gabriel Mountains of southern California. Banded gneisses include mafic granulites of two geochemical types: type 1 rocks are similar to high Al arc basalts and andesites but have higher HFSE (high-field-strength-element) abundances and extremely variable LILE (largeion-lithophile-element) abundances, while type 2 rocks are relatively low in Al and similar to alkali rich MOR (midocean-ridge) or intraplate basalts. Intercalated with mafic granulites are paragneisses which include felsic granulites, aluminous gneisses, marble, and calc-silicate gneisses. Type 1 mafic granulites and calcic trondhjemitic pegmatites also oceur as cross-cutting, synmetamorphic dikes or small plutons. Small-scale heterogeneity of deep continental crust is indicated by the lithologic and isotopic diversity of intercalated ortho-and paragneisses exposed in Cucamonga terrane. Geochemical and isotopic data indicate that K, Rb, and U depletion and Sm/Nd fractionation were associated with biotite +/- muscovite dehydration reactions in type 1 mafic granulites and aluminous gneisses during high-grade metamorphism. Field relations and model initial isotopic ratios imply a wide range of protolith ages, ranging from Early Proterozoic to Phanerozoic. ?? 1992 Springer-Verlag.

Simulated trends of extreme climate indices for the Carpathian basin using outputs of different regional climate models

NASA Astrophysics Data System (ADS)

Pongracz, R.; Bartholy, J.; Szabo, P.; Pieczka, I.; Torma, C. S.

2009-04-01

Regional climatological effects of global warming may be recognized not only in shifts of mean temperature and precipitation, but in the frequency or intensity changes of different climate extremes. Several climate extreme indices are analyzed and compared for the Carpathian basin (located in Central/Eastern Europe) following the guidelines suggested by the joint WMO-CCl/CLIVAR Working Group on climate change detection. Our statistical trend analysis includes the evaluation of several extreme temperature and precipitation indices, e.g., the numbers of severe cold days, winter days, frost days, cold days, warm days, summer days, hot days, extremely hot days, cold nights, warm nights, the intra-annual extreme temperature range, the heat wave duration, the growing season length, the number of wet days (using several threshold values defining extremes), the maximum number of consecutive dry days, the highest 1-day precipitation amount, the greatest 5-day rainfall total, the annual fraction due to extreme precipitation events, etc. In order to evaluate the future trends (2071-2100) in the Carpathian basin, daily values of meteorological variables are obtained from the outputs of various regional climate model (RCM) experiments accomplished in the frame of the completed EU-project PRUDENCE (Prediction of Regional scenarios and Uncertainties for Defining EuropeaN Climate change risks and Effects). Horizontal resolution of the applied RCMs is 50 km. Both scenarios A2 and B2 are used to compare past and future trends of the extreme climate indices for the Carpathian basin. Furthermore, fine-resolution climate experiments of two additional RCMs adapted and run at the Department of Meteorology, Eotvos Lorand University are used to extend the trend analysis of climate extremes for the Carpathian basin. (1) Model PRECIS (run at 25 km horizontal resolution) was developed at the UK Met Office, Hadley Centre, and it uses the boundary conditions from the HadCM3 GCM. (2) Model RegCM3 (run at 10 km horizontal resolution) was developed by Giorgi et al. and it is available from the ICTP (International Centre for Theoretical Physics). Analysis of the simulated daily temperature datasets suggests that the detected regional warming is expected to continue in the 21st century. Cold temperature extremes are projected to decrease while warm extremes tend to increase significantly. Expected changes of annual precipitation indices are small, but generally consistent with the detected trends of the 20th century. Based on the simulations, extreme precipitation events are expected to become more intense and more frequent in winter, while a general decrease of extreme precipitation indices is expected in summer.

Measuring missing heritability: Inferring the contribution of common variants

PubMed Central

Golan, David; Lander, Eric S.; Rosset, Saharon

2014-01-01

Genome-wide association studies (GWASs), also called common variant association studies (CVASs), have uncovered thousands of genetic variants associated with hundreds of diseases. However, the variants that reach statistical significance typically explain only a small fraction of the heritability. One explanation for the “missing heritability” is that there are many additional disease-associated common variants whose effects are too small to detect with current sample sizes. It therefore is useful to have methods to quantify the heritability due to common variation, without having to identify all causal variants. Recent studies applied restricted maximum likelihood (REML) estimation to case–control studies for diseases. Here, we show that REML considerably underestimates the fraction of heritability due to common variation in this setting. The degree of underestimation increases with the rarity of disease, the heritability of the disease, and the size of the sample. Instead, we develop a general framework for heritability estimation, called phenotype correlation–genotype correlation (PCGC) regression, which generalizes the well-known Haseman–Elston regression method. We show that PCGC regression yields unbiased estimates. Applying PCGC regression to six diseases, we estimate the proportion of the phenotypic variance due to common variants to range from 25% to 56% and the proportion of heritability due to common variants from 41% to 68% (mean 60%). These results suggest that common variants may explain at least half the heritability for many diseases. PCGC regression also is readily applicable to other settings, including analyzing extreme-phenotype studies and adjusting for covariates such as sex, age, and population structure. PMID:25422463

Class I and II Small Heat Shock Proteins Together with HSP101 Protect Protein Translation Factors during Heat Stress1[OPEN

PubMed Central

Basha, Eman; Fowler, Mary E.; Kim, Minsoo; Bordowitz, Juliana; Katiyar-Agarwal, Surekha

2016-01-01

The ubiquitous small heat shock proteins (sHSPs) are well documented to act in vitro as molecular chaperones to prevent the irreversible aggregation of heat-sensitive proteins. However, the in vivo activities of sHSPs remain unclear. To investigate the two most abundant classes of plant cytosolic sHSPs (class I [CI] and class II [CII]), RNA interference (RNAi) and overexpression lines were created in Arabidopsis (Arabidopsis thaliana) and shown to have reduced and enhanced tolerance, respectively, to extreme heat stress. Affinity purification of CI and CII sHSPs from heat-stressed seedlings recovered eukaryotic translation elongation factor (eEF) 1B (α-, β-, and γ-subunits) and eukaryotic translation initiation factor 4A (three isoforms), although the association with CI sHSPs was stronger and additional proteins involved in translation were recovered with CI sHSPs. eEF1B subunits became partially insoluble during heat stress and, in the CI and CII RNAi lines, showed reduced recovery to the soluble cell fraction after heat stress, which was also dependent on HSP101. Furthermore, after heat stress, CI sHSPs showed increased retention in the insoluble fraction in the CII RNAi line and vice versa. Immunolocalization revealed that both CI and CII sHSPs were present in cytosolic foci, some of which colocalized with HSP101 and with eEF1Bγ and eEF1Bβ. Thus, CI and CII sHSPs have both unique and overlapping functions and act either directly or indirectly to protect specific translation factors in cytosolic stress granules. PMID:27474115

Small deformations of extreme five dimensional Myers-Perry black hole initial data

NASA Astrophysics Data System (ADS)

Alaee, Aghil; Kunduri, Hari K.

2015-02-01

We demonstrate the existence of a one-parameter family of initial data for the vacuum Einstein equations in five dimensions representing small deformations of the extreme Myers-Perry black hole. This initial data set has `' symmetry and preserves the angular momenta and horizon geometry of the extreme solution. Our proof is based upon an earlier result of Dain and Gabach-Clement concerning the existence of -invariant initial data sets which preserve the geometry of extreme Kerr (at least for short times). In addition, we construct a general class of transverse, traceless symmetric rank 2 tensors in these geometries.

Experimental Results of Fractionation of HDO and H2O with simulated Martian Dust: Implications for the interpretation of past climate on Mars

NASA Astrophysics Data System (ADS)

Moores, J. E.; Smith, P.; Brown, R.; Lauretta, D.; Boynton, W.

2009-05-01

Climate change on Mars has been greatly debated in recent years. This has been motivated by the results from the Mars Reconnaissance Orbiter, Phoenix Lander and ground-based spectroscopic studies which have found mounting evidence that not only may Mars have had a wet and warm past, but those conditions inclement to life may also have been present more recently. On Mars, this is largely a story of water transport and, as on the Earth, isotopic analysis presents a key to understanding and decoding the Martian paleoclimate. For Mars, the major fractionation observed is in HDO, analogous to the Oxygen-18 cycle on Earth, and observations have shown that the D/H ratio of the planet is enriched by a factor of 5 to 6 from comparable terrestrial values. The conventional explanation is that a great deal of water has been lost to space over geologic time. However, previous studies have not taken into account the ability of present-day Mars to fractionate water as it moves from the polar caps to the polar layered deposits through the atmosphere, potentially masking any climate signal which may exist. In this presentation, we shall report on a series of Mars analogue experiments completed at the relevant ranges of pressure and temperature. Two different scenarios were simulated: the sublimation of dusty water ice and the sublimation of clean water ice through a simulated regolith/dust lag. In both cases, we have found that the system is dominated by adsorption of water. However, the simulant dust (JSC-1) appears to be an extremely efficient vehicle for fractionating water at cold temperatures, as different desorption rates have been recorded for HDO and H2O. This, when coupled with the relatively small amount of water exchanging today implies heavy fractionations in the current Mars system without requiring significant water losses to space.

36 CFR 254.34 - Mineral survey fractions.

Code of Federal Regulations, 2010 CFR

2010-07-01

... 36 Parks, Forests, and Public Property 2 2010-07-01 2010-07-01 false Mineral survey fractions. 254... LANDOWNERSHIP ADJUSTMENTS Conveyance of Small Tracts § 254.34 Mineral survey fractions. (a) Mineral survey... survey fractions under this subpart: (1) The mineral survey fractions are interspersed among and are more...

36 CFR 254.34 - Mineral survey fractions.

Code of Federal Regulations, 2012 CFR

2012-07-01

... 36 Parks, Forests, and Public Property 2 2012-07-01 2012-07-01 false Mineral survey fractions. 254... LANDOWNERSHIP ADJUSTMENTS Conveyance of Small Tracts § 254.34 Mineral survey fractions. (a) Mineral survey... survey fractions under this subpart: (1) The mineral survey fractions are interspersed among and are more...

36 CFR 254.34 - Mineral survey fractions.

Code of Federal Regulations, 2014 CFR

2014-07-01

... 36 Parks, Forests, and Public Property 2 2014-07-01 2014-07-01 false Mineral survey fractions. 254... LANDOWNERSHIP ADJUSTMENTS Conveyance of Small Tracts § 254.34 Mineral survey fractions. (a) Mineral survey... survey fractions under this subpart: (1) The mineral survey fractions are interspersed among and are more...

36 CFR 254.34 - Mineral survey fractions.

Code of Federal Regulations, 2011 CFR

2011-07-01

... 36 Parks, Forests, and Public Property 2 2011-07-01 2011-07-01 false Mineral survey fractions. 254... LANDOWNERSHIP ADJUSTMENTS Conveyance of Small Tracts § 254.34 Mineral survey fractions. (a) Mineral survey... survey fractions under this subpart: (1) The mineral survey fractions are interspersed among and are more...

SU-E-T-427: Cell Surviving Fractions Derived From Tumor-Volume Variation During Radiotherapy for Non-Small Cell Lung Cancer: Comparison with Predictive Assays

DOE Office of Scientific and Technical Information (OSTI.GOV)

Chvetsov, A; Schwartz, J; Mayr, N

2014-06-01

Purpose: To show that a distribution of cell surviving fractions S{sub 2} in a heterogeneous group of patients can be derived from tumor-volume variation curves during radiotherapy for non-small cell lung cancer. Methods: Our analysis was based on two data sets of tumor-volume variation curves for heterogeneous groups of 17 patients treated for nonsmall cell lung cancer with conventional dose fractionation. The data sets were obtained previously at two independent institutions by using megavoltage (MV) computed tomography (CT). Statistical distributions of cell surviving fractions S{sup 2} and cell clearance half-lives of lethally damaged cells T1/2 have been reconstructed in eachmore » patient group by using a version of the two-level cell population tumor response model and a simulated annealing algorithm. The reconstructed statistical distributions of the cell surviving fractions have been compared to the distributions measured using predictive assays in vitro. Results: Non-small cell lung cancer presents certain difficulties for modeling surviving fractions using tumor-volume variation curves because of relatively large fractional hypoxic volume, low gradient of tumor-volume response, and possible uncertainties due to breathing motion. Despite these difficulties, cell surviving fractions S{sub 2} for non-small cell lung cancer derived from tumor-volume variation measured at different institutions have similar probability density functions (PDFs) with mean values of 0.30 and 0.43 and standard deviations of 0.13 and 0.18, respectively. The PDFs for cell surviving fractions S{sup 2} reconstructed from tumor volume variation agree with the PDF measured in vitro. Comparison of the reconstructed cell surviving fractions with patient survival data shows that the patient survival time decreases as the cell surviving fraction increases. Conclusion: The data obtained in this work suggests that the cell surviving fractions S{sub 2} can be reconstructed from the tumor volume variation curves measured during radiotherapy with conventional fractionation. The proposed method can be used for treatment evaluation and adaptation.« less

Relationship between diffusion tensor fractional anisotropy and long-term motor outcome in patients with hemiparesis after middle cerebral artery infarction.

PubMed

Koyama, Tetsuo; Marumoto, Kohei; Miyake, Hiroji; Domen, Kazuhisa

2014-10-01

Magnetic resonance diffusion tensor fractional anisotropy (DTI-FA) is often used to characterize neural damage after stroke. Here we assessed the relationship between DTI-FA and long-term motor outcome in patients after middle cerebral artery (MCA) infarction. Fractional anisotropy (FA) maps were generated from diffusion tensor brain images obtained from 16 patients 14-18 days postinfarction, and tract-based spatial statistics (TBSS) analysis was applied. Regions of interest were set within the right and left corticospinal tracts, and mean FA values were extracted from individual TBSS data. Hemiparesis motor outcome was evaluated according to Brunnstrom stage (BRS: 1-6, severe-normal) for separate shoulder/elbow/forearm, hand, and lower extremity functions, as well as the motor component score of the Functional Independence Measure (FIM-motor: 13-91, null-full) 5-7 months after onset. Ratios between FA values in the affected and unaffected hemispheres (rFA) were assessed by BRS and FIM-motor scores. rFA values were .636-.984 (median, .883) and BRS scores were 1-6 (median, 3) for shoulder/elbow/forearm, 2-6 (median, 3) for hand, and 3-6 (median, 5) for the lower extremities. FIM-motor scores were 51-90 (median, 75). Analysis revealed significant relationships between rFA and BRS data (correlation coefficient: .687 for shoulder/elbow/forearm, .579 for hand, and .623 for lower extremities) but no significance relationship between rFA and FIM-motor scores. The results suggest that DTI-FA is applicable for predicting the long-term outcome of extremity functions after MCA infarction. Copyright © 2014 National Stroke Association. Published by Elsevier Inc. All rights reserved.

SSTO rockets. A practical possibility

NASA Technical Reports Server (NTRS)

Bekey, Ivan

1994-01-01

Most experts agree that single-stage-to-orbit (SSTO) rockets would become feasible if more advanced technologies were available to reduce the vehicle dry weight, increase propulsion system performance, or both. However, these technologies are usually judged to be very ambitious and very far off. This notion persists despite major advances in technology and vehicle design in the past decade. There appears to be four major misperceptions about SSTOs, regarding their mass fraction, their presumed inadequate performance margin, their supposedly small payloads, and their extreme sensitivity to unanticipated vehicle weight growth. These misperceptions can be dispelled for SSTO rockets using advanced technologies that could be matured and demonstrated in the near term. These include a graphite-composite primary structure, graphite-composite and Al-Li propellant tanks with integral reusable thermal protection, long-life tripropellant or LOX-hydrogen engines, and several technologies related to operational effectiveness, including vehicle health monitoring, autonomous avionics/flight control, and operable launch and ground handling systems.

SSTO rockets. A practical possibility

NASA Astrophysics Data System (ADS)

Bekey, Ivan

1994-07-01

Most experts agree that single-stage-to-orbit (SSTO) rockets would become feasible if more advanced technologies were available to reduce the vehicle dry weight, increase propulsion system performance, or both. However, these technologies are usually judged to be very ambitious and very far off. This notion persists despite major advances in technology and vehicle design in the past decade. There appears to be four major misperceptions about SSTOs, regarding their mass fraction, their presumed inadequate performance margin, their supposedly small payloads, and their extreme sensitivity to unanticipated vehicle weight growth. These misperceptions can be dispelled for SSTO rockets using advanced technologies that could be matured and demonstrated in the near term. These include a graphite-composite primary structure, graphite-composite and Al-Li propellant tanks with integral reusable thermal protection, long-life tripropellant or LOX-hydrogen engines, and several technologies related to operational effectiveness, including vehicle health monitoring, autonomous avionics/flight control, and operable launch and ground handling systems.

Mathematical modeling of hydrolysate diffusion and utilization in cellulolytic biofilms of the extreme thermophile Caldicellulosiruptor obsidiansis.

PubMed

Wang, Zhi-Wu; Hamilton-Brehm, Scott D; Lochner, Adriane; Elkins, James G; Morrell-Falvey, Jennifer L

2011-02-01

In this study, a hydrolysate diffusion and utilization model was developed to examine factors influencing cellulolytic biofilm morphology. Model simulations using Caldicellulosiruptor obsidiansis revealed that the cellulolytic biofilm needs to generate more hydrolysate than it consumes to establish a higher than bulk solution intra-biofilm substrate concentration to support its growth. This produces a hydrolysate surplus that diffuses through the thin biofilm structure into the bulk solution, which gives rise to a uniform growth rate and hence the homogeneous morphology of the cellulolytic biofilm. Model predictions were tested against experimental data from a cellulose-fermenting bioreactor and the results were consistent with the model prediction and indicated that only a small fraction (10-12%) of the soluble hydrolysis products are utilized by the biofilm. The factors determining the rate-limiting step of cellulolytic biofilm growth are also analyzed and discussed. Copyright © 2010 Elsevier Ltd. All rights reserved.

Starch Structure Influences Its Digestibility: A Review.

PubMed

Magallanes-Cruz, Perla A; Flores-Silva, Pamela C; Bello-Perez, Luis A

2017-09-01

Twenty-five years ago, it was found that a significant fraction of the starch present in foods is not digested in the small intestine and continues to the large intestine, where it is fermented by the microbiota; this fraction was named resistant starch (RS). It was also reported that there is a fraction of starch that is slowly digested, sustaining a release of glucose in the small intestine. Later, health benefits were found to be associated with the consumption of this fraction, called slowly digestible starch (SDS). The authors declare both fractions to be "nutraceutical starch." An overview of the structure of both fractions (RS and SDS), as well as their nutraceutical characteristics, is presented with the objective of suggesting methods and processes that will increase both fractions in starchy foods and prevent diseases that are associated with the consumption of glycemic carbohydrates. © 2017 Institute of Food Technologists®.

Analysis of the giant genomes of Fritillaria (Liliaceae) indicates that a lack of DNA removal characterizes extreme expansions in genome size.

PubMed

Kelly, Laura J; Renny-Byfield, Simon; Pellicer, Jaume; Macas, Jiří; Novák, Petr; Neumann, Pavel; Lysak, Martin A; Day, Peter D; Berger, Madeleine; Fay, Michael F; Nichols, Richard A; Leitch, Andrew R; Leitch, Ilia J

2015-10-01

Plants exhibit an extraordinary range of genome sizes, varying by > 2000-fold between the smallest and largest recorded values. In the absence of polyploidy, changes in the amount of repetitive DNA (transposable elements and tandem repeats) are primarily responsible for genome size differences between species. However, there is ongoing debate regarding the relative importance of amplification of repetitive DNA versus its deletion in governing genome size. Using data from 454 sequencing, we analysed the most repetitive fraction of some of the largest known genomes for diploid plant species, from members of Fritillaria. We revealed that genomic expansion has not resulted from the recent massive amplification of just a handful of repeat families, as shown in species with smaller genomes. Instead, the bulk of these immense genomes is composed of highly heterogeneous, relatively low-abundance repeat-derived DNA, supporting a scenario where amplified repeats continually accumulate due to infrequent DNA removal. Our results indicate that a lack of deletion and low turnover of repetitive DNA are major contributors to the evolution of extremely large genomes and show that their size cannot simply be accounted for by the activity of a small number of high-abundance repeat families. © 2015 The Authors. New Phytologist © 2015 New Phytologist Trust.

Continuous Isotropic-Nematic Transition in Amyloid Fibril Suspensions Driven by Thermophoresis.

PubMed

Vigolo, Daniele; Zhao, Jianguo; Handschin, Stephan; Cao, Xiaobao; deMello, Andrew J; Mezzenga, Raffaele

2017-04-27

The isotropic and nematic (I + N) coexistence for rod-like colloids is a signature of the first-order thermodynamics nature of this phase transition. However, in the case of amyloid fibrils, the biphasic region is too small to be experimentally detected, due to their extremely high aspect ratio. Herein, we study the thermophoretic behaviour of fluorescently labelled β-lactoglobulin amyloid fibrils by inducing a temperature gradient across a microfluidic channel. We discover that fibrils accumulate towards the hot side of the channel at the temperature range studied, thus presenting a negative Soret coefficient. By exploiting this thermophoretic behaviour, we show that it becomes possible to induce a continuous I-N transition with the I and N phases at the extremities of the channel, starting from an initially single N phase, by generating an appropriate concentration gradient along the width of the microchannel. Accordingly, we introduce a new methodology to control liquid crystal phase transitions in anisotropic colloidal suspensions. Because the induced order-order transitions are achieved under stationary conditions, this may have important implications in both applied colloidal science, such as in separation and fractionation of colloids, as well as in fundamental soft condensed matter, by widening the accessibility of target regions in the phase diagrams.

Thermodynamic sensitivities in observed and simulated extreme-rain-producing mesoscale convective systems

NASA Astrophysics Data System (ADS)

Schumacher, R. S.; Peters, J. M.

2015-12-01

Mesoscale convective systems (MCSs) are responsible for a large fraction of warm-season extreme rainfall events over the continental United States, as well as other midlatitude regions globally. The rainfall production in these MCSs is determined by numerous factors, including the large-scale forcing for ascent, the organization of the convection, cloud microphysical processes, and the surrounding thermodynamic and kinematic environment. Furthermore, heavy-rain-producing MCSs are most common at night, which means that well-studied mechanisms for MCS maintenance and organization such as cold pools (gravity currents) are not always at work. In this study, we use numerical model simulations and recent field observations to investigate the sensitivity of low-level MCS structures, and their influences on rainfall, to the details of the thermodynamic environment. In particular, small alterations to the initial conditions in idealized and semi-idealized simulations result in comparatively large precipitation changes, both in terms of the intensity and the spatial distribution. The uncertainties in the thermodynamic enviroments in the model simulations will be compared with high-resolution observations from the Plains Elevated Convection At Night (PECAN) field experiment in 2015. The results have implications for the paradigms of "surface-based" versus "elevated" convection, as well as for the predictability of warm-season convective rainfall.

Shotgun proteomics of Aspergillus niger microsomes upon D-xylose induction.

PubMed

Ferreira de Oliveira, José Miguel P; van Passel, Mark W J; Schaap, Peter J; de Graaff, Leo H

2010-07-01

Protein secretion plays an eminent role in cell maintenance and adaptation to the extracellular environment of microorganisms. Although protein secretion is an extremely efficient process in filamentous fungi, the mechanisms underlying protein secretion have remained largely uncharacterized in these organisms. In this study, we analyzed the effects of the d-xylose induction of cellulase and hemicellulase enzyme secretion on the protein composition of secretory organelles in Aspergillus niger. We aimed to systematically identify the components involved in the secretion of these enzymes via mass spectrometry of enriched subcellular microsomal fractions. Under each condition, fractions enriched for secretory organelles were processed for tandem mass spectrometry, resulting in the identification of peptides that originate from 1,081 proteins, 254 of which-many of them hypothetical proteins-were predicted to play direct roles in the secretory pathway. d-Xylose induction led to an increase in specific small GTPases known to be associated with polarized growth, exocytosis, and endocytosis. Moreover, the endoplasmic-reticulum-associated degradation (ERAD) components Cdc48 and all 14 of the 20S proteasomal subunits were recruited to the secretory organelles. In conclusion, induction of extracellular enzymes results in specific changes in the secretory subproteome of A. niger, and the most prominent change found in this study was the recruitment of the 20S proteasomal subunits to the secretory organelles.

Ion Traps at the Sun: Implications for Elemental Fractionation

NASA Astrophysics Data System (ADS)

Fleishman, Gregory D.; Musset, Sophie; Bommier, Véronique; Glesener, Lindsay

2018-04-01

Why the tenuous solar outer atmosphere, or corona, is much hotter than the underlying layers remains one of the greatest challenges for solar modeling. Detailed diagnostics of the coronal thermal structure come from extreme ultraviolet (EUV) emission. The EUV emission is produced by heavy ions in various ionization states and depends on the amount of these ions and on plasma temperature and density. Any nonuniformity of the elemental distribution in space or variability in time affects thermal diagnostics of the corona. Here we theoretically predict ionized chemical element concentrations in some areas of the solar atmosphere, where the electric current is directed upward. We then detect these areas observationally, by comparing the electric current density with the EUV brightness in an active region. We found a significant excess in EUV brightness in the areas with positive current density rather than negative. Therefore, we report the observational discovery of substantial concentrations of heavy ions in current-carrying magnetic flux tubes, which might have important implications for the elemental fractionation in the solar corona known as the first ionization potential effect. We call such areas of heavy ion concentration the “ion traps.” These traps hold enhanced ion levels until they are disrupted by a flare, whether large or small.

Combinatorial Multidomain Mesoporous Chips and a Method for Fractionation, Stabilization, and Storage of Biomolecules

NASA Technical Reports Server (NTRS)

Tasciotti, Ennio (Inventor); Hu, Ye (Inventor); Ferrari, Mauro (Inventor); Bouamrani, Ali (Inventor); Liu, Xuewu (Inventor)

2014-01-01

A new fractionation device shows desirable features for exploratory screening and biomarker discovery. The constituent MSCs may be tailored for desired pore sizes and surface properties and for the sequestration and enrichment of extremely low abundant protein and peptides in desired ranges of the mass/charge spectrum. The MSCs are effective in yielding reproducible extracts from complex biological samples as small as 10 microliter in a time as short as 30 minutes. They are inexpensive to manufacture, and allow for scaled up production to attain the simultaneous processing of a large number of samples. The MSCs are multiplexed, label-free diagnostic tools with the potential of biological recognition moiety modification for enhanced specificity. The MSCs may store, protect and stabilize biological fluids, enabling the simplified and cost-effective collection and transportation of clinical samples. The MSC-based device may serve as a diagnostic tool to complement histopathology, imaging, and other conventional clinical techniques. The MSCs mediated identification of disease-specific protein signatures may help in the selection of personalized therapeutic combinations, in the real-time assessment of therapeutic efficacy and toxicity, and in the rational modulation of therapy based on the changes in the protein networks associated with the prognosis and the drug resistance of the disease.

Bubble breakup phenomena in a venturi tube

NASA Astrophysics Data System (ADS)

Fujiwara, Akiko

2005-11-01

Microbubble has distinguished characteristics of large surface area to unit volume and small buoyancy, and it has advantages in many engineering fields. Recently microbubble generators with low energy and high performance are required to wide applications. In the present study, we propose one new effective technique to generate tiny bubbles with less than 200 μm diameter utilizing venturi tube under high void fraction condition. The objective of the present study is to elucidate the mechanism of bubble breakup phenomena in the venturi tube and to clarify the effects of parameters which are necessary to realize an optimum system experimentally. Experiment was conducted with void fraction of 4% and variation of liquid velocity from 9 to 26 m/s at the throat. Under low velocity condition, bubbles which were observed with a high speed camera parted gradually in a wide region. On the contrary under high velocity condition, bubbles expanded after passing through the throat and shrank rapidly. Since the speed of sound in gas-liquid system is extremely lower than that of single-phase flow, the bubble breakup phenomenon in the venturi tube is explained as the supersonic flow in a Laval nozzle. By rapid pressure recovery in diverging area, expanding bubbles collapse violently. The tiny bubbles are generated due to the surface instability of shrinking bubbles.

The Characteristics of Extreme Erosion Events in a Small Mountainous Watershed

PubMed Central

Fang, Nu-Fang; Shi, Zhi-Hua; Yue, Ben-Jiang; Wang, Ling

2013-01-01

A large amount of soil loss is caused by a small number of extreme events that are mainly responsible for the time compression of geomorphic processes. The aim of this study was to analyze suspended sediment transport during extreme erosion events in a mountainous watershed. Field measurements were conducted in Wangjiaqiao, a small agricultural watershed (16.7 km2) in the Three Gorges Area (TGA) of China. Continuous records were used to analyze suspended sediment transport regimes and assess the sediment loads of 205 rainfall–runoff events during a period of 16 hydrological years (1989–2004). Extreme events were defined as the largest events, ranked in order of their absolute magnitude (representing the 95th percentile). Ten extreme erosion events from 205 erosion events, representing 83.8% of the total suspended sediment load, were selected for study. The results of canonical discriminant analysis indicated that extreme erosion events are characterized by high maximum flood-suspended sediment concentrations, high runoff coefficients, and high flood peak discharge, which could possibly be explained by the transport of deposited sediment within the stream bed during previous events or bank collapses. PMID:24146898

Carbon turnover in the water-soluble protein of the adult human lens

PubMed Central

Stewart, Daniel N.; Lango, Jozsef; Nambiar, Krishnan P.; Falso, Miranda J. S.; FitzGerald, Paul G.; Rocke, David M.; Hammock, Bruce D.

2013-01-01

Purpose Human eye lenses contain cells that persist from embryonic development. These unique, highly specialized fiber cells located at the core (nucleus) of the lens undergo pseudo-apoptosis to become devoid of cell nuclei and most organelles. Ostensibly lacking in protein transcriptional capabilities, it is currently believed that these nuclear fiber cells owe their extreme longevity to the perseverance of highly stable and densely packed crystallin proteins. Maintaining the structural and functional integrity of lenticular proteins is necessary to sustain cellular transparency and proper vision, yet the means by which the lens actually copes with a lifetime of oxidative stress, seemingly without any capacity for protein turnover and repair, is not completely understood. Although many years of research have been predicated upon the assumption that there is no protein turnover or renewal in nuclear fiber cells, we investigated whether or not different protein fractions possess protein of different ages by using the 14C bomb pulse. Methods Adult human lenses were concentrically dissected by gently removing the cell layers in water or shaving to the nucleus with a curved micrometer-controlled blade. The cells were lysed, and the proteins were separated into water-soluble and water-insoluble fractions. The small molecules were removed using 3 kDa spin filters. The 14C/C was measured in paired protein fractions by accelerator mass spectrometry, and an average age for the material within the sample was assigned using the 14C bomb pulse. Results The water-insoluble fractions possessed 14C/C ratios consistent with the age of the cells. In all cases, the water-soluble fractions contained carbon that was younger than the paired water-insoluble fraction. Conclusions As the first direct evidence of carbon turnover in protein from adult human nuclear fiber cells, this discovery supports the emerging view of the lens nucleus as a dynamic system capable of maintaining homeostasis in part due to intricate protein transport mechanisms and possibly protein repair. This finding implies that the lens plays an active role in the aversion of age-related nuclear (ARN) cataract. PMID:23441119

Collisional erosion and the non-chondritic composition of the terrestrial planets.

PubMed

O'Neill, Hugh St C; Palme, Herbert

2008-11-28

The compositional variations among the chondrites inform us about cosmochemical fractionation processes during condensation and aggregation of solid matter from the solar nebula. These fractionations include: (i) variable Mg-Si-RLE ratios (RLE: refractory lithophile element), (ii) depletions in elements more volatile than Mg, (iii) a cosmochemical metal-silicate fractionation, and (iv) variations in oxidation state. Moon- to Mars-sized planetary bodies, formed by rapid accretion of chondrite-like planetesimals in local feeding zones within 106 years, may exhibit some of these chemical variations. However, the next stage of planetary accretion is the growth of the terrestrial planets from approximately 102 embryos sourced across wide heliocentric distances, involving energetic collisions, in which material may be lost from a growing planet as well as gained. While this may result in averaging out of the 'chondritic' fractionations, it introduces two non-chondritic chemical fractionation processes: post-nebular volatilization and preferential collisional erosion. In the latter, geochemically enriched crust formed previously is preferentially lost. That post-nebular volatilization was widespread is demonstrated by the non-chondritic Mn/Na ratio in all the small, differentiated, rocky bodies for which we have basaltic samples, including the Moon and Mars. The bulk silicate Earth (BSE) has chondritic Mn/Na, but shows several other compositional features in its pattern of depletion of volatile elements suggestive of non-chondritic fractionation. The whole-Earth Fe/Mg ratio is 2.1+/-0.1, significantly greater than the solar ratio of 1.9+/-0.1, implying net collisional erosion of approximately 10 per cent silicate relative to metal during the Earth's accretion. If this collisional erosion preferentially removed differentiated crust, the assumption of chondritic ratios among all RLEs in the BSE would not be valid, with the BSE depleted in elements according to their geochemical incompatibility. In the extreme case, the Earth would only have half the chondritic abundances of the highly incompatible, heat-producing elements Th, U and K. Such an Earth model resolves several geochemical paradoxes: the depleted mantle occupies the whole mantle, is completely outgassed in (40)Ar and produces the observed (4)He flux through the ocean basins. But the lower radiogenic heat production exacerbates the discrepancy with heat loss.

Rationale, conduct, and outcome using hypofractionated radiotherapy in prostate cancer

PubMed Central

Ritter, Mark

2008-01-01

Hypofractionated radiation therapy for prostate cancer has become of increasing interest with the recognition of a potential improvement in therapeutic ratio with treatments delivered in larger-sized fractions. In addition, the associated reduction in fraction number produces attractive cost and patient convenience advantages as well. A still limited but growing number of hypofractionation trials have reported acceptable short-term levels of toxicity and biochemical control, but most have insufficient follow-up to assure the long-term safety and efficacy of this approach. This situation will improve as many currently active trials mature, particularly several high value randomized trials. In contrast, extreme hypofractionation, with schedules delivering only on the order of 5 fractions, is truly in its infancy for prostate cancer, with extremely limited tolerance and efficacy information currently available. Several uncertainties in the radiobiology of hypofractionation mitigate for an organized, cautious investigational approach. The fractionation response (α/β ratio) of prostate cancers and, for that matter, late responding normal tissues, has yet to be rigorously defined. Additionally, the linear quadratic (LQ) model used in the design of hypofractionation schedules is subject to its own uncertainties, particularly with respect to the upper limit of fraction sizes for which it remains valid. Contemporary dose escalated radiation therapy is already highly effective, making it imperative that ongoing and future studies of hypofractionation be carried out in carefully designed, randomized clinical trials. Clinical validation permitting, the adaptation of hypofractionation as a standard of care could profoundly influence future management of localized prostate cancer. PMID:18725112

Extreme Temperature Performance of Automotive-Grade Small Signal Bipolar Junction Transistors

NASA Technical Reports Server (NTRS)

Boomer, Kristen; Damron, Benny; Gray, Josh; Hammoud, Ahmad

2018-01-01

Electronics designed for space exploration missions must display efficient and reliable operation under extreme temperature conditions. For example, lunar outposts, Mars rovers and landers, James Webb Space Telescope, Europa orbiter, and deep space probes represent examples of missions where extreme temperatures and thermal cycling are encountered. Switching transistors, small signal as well as power level devices, are widely used in electronic controllers, data instrumentation, and power management and distribution systems. Little is known, however, about their performance in extreme temperature environments beyond their specified operating range; in particular under cryogenic conditions. This report summarizes preliminary results obtained on the evaluation of commercial-off-the-shelf (COTS) automotive-grade NPN small signal transistors over a wide temperature range and thermal cycling. The investigations were carried out to establish a baseline on functionality of these transistors and to determine suitability for use outside their recommended temperature limits.

Small (13)C/(12)C fractionation contrasts with large enantiomer fractionation in aerobic biodegradation of phenoxy acids.

PubMed

Qiu, Shiran; Gözdereliler, Erkin; Weyrauch, Philip; Lopez, Eva C Magana; Kohler, Hans-Peter E; Sørensen, Sebastian R; Meckenstock, Rainer U; Elsner, Martin

2014-05-20

Phenoxy acid herbicides are important groundwater contaminants. Stable isotope analysis and enantiomer analysis are well-recognized approaches for assessing in situ biodegradation in the field. In an aerobic degradation survey with six phenoxyacetic acid and three phenoxypropionic acid-degrading bacteria we measured (a) enantiomer-specific carbon isotope fractionation of MCPP ((R,S)-2-(4-chloro-2-methylphenoxy)-propionic acid), DCPP ((R,S)-2-(2,4-dichlorophenoxy)-propionic acid), and 4-CPP ((R,S)-2-(4-chlorophenoxy)-propionic acid); (b) compound-specific isotope fractionation of MCPA (4-chloro-2-methylphenoxyacetic acid) and 2,4-D (2,4-dichlorophenoxyacetic acid); and (c) enantiomer fractionation of MCPP, DCPP, and 4-CPP. Insignificant or very slight (ε = -1.3‰ to -2.0‰) carbon isotope fractionation was observed. Equally small values in an RdpA enzyme assay (εea = -1.0 ± 0.1‰) and even smaller fractionation in whole cell experiments of the host organism Sphingobium herbicidovorans MH (εwc = -0.3 ± 0.1‰) suggest that (i) enzyme-associated isotope effects were already small, yet (ii) further masked by active transport through the cell membrane. In contrast, enantiomer fractionation in MCPP, DCPP, and 4-CPP was pronounced, with enantioselectivities (ES) of -0.65 to -0.98 with Sphingomonas sp. PM2, -0.63 to -0.89 with Sphingobium herbicidovorans MH, and 0.74 to 0.97 with Delftia acidovorans MC1. To detect aerobic biodegradation of phenoxypropionic acids in the field, enantiomer fractionation seems, therefore, a stronger indicator than carbon isotope fractionation.

A New Void Fraction Measurement Method for Gas-Liquid Two-Phase Flow in Small Channels

PubMed Central

Li, Huajun; Ji, Haifeng; Huang, Zhiyao; Wang, Baoliang; Li, Haiqing; Wu, Guohua

2016-01-01

Based on a laser diode, a 12 × 6 photodiode array sensor, and machine learning techniques, a new void fraction measurement method for gas-liquid two-phase flow in small channels is proposed. To overcome the influence of flow pattern on the void fraction measurement, the flow pattern of the two-phase flow is firstly identified by Fisher Discriminant Analysis (FDA). Then, according to the identification result, a relevant void fraction measurement model which is developed by Support Vector Machine (SVM) is selected to implement the void fraction measurement. A void fraction measurement system for the two-phase flow is developed and experiments are carried out in four different small channels. Four typical flow patterns (including bubble flow, slug flow, stratified flow and annular flow) are investigated. The experimental results show that the development of the measurement system is successful. The proposed void fraction measurement method is effective and the void fraction measurement accuracy is satisfactory. Compared with the conventional laser measurement systems using standard laser sources, the developed measurement system has the advantages of low cost and simple structure. Compared with the conventional void fraction measurement methods, the proposed method overcomes the influence of flow pattern on the void fraction measurement. This work also provides a good example of using low-cost laser diode as a competent replacement of the expensive standard laser source and hence implementing the parameter measurement of gas-liquid two-phase flow. The research results can be a useful reference for other researchers’ works. PMID:26828488

A New Void Fraction Measurement Method for Gas-Liquid Two-Phase Flow in Small Channels.

PubMed

Li, Huajun; Ji, Haifeng; Huang, Zhiyao; Wang, Baoliang; Li, Haiqing; Wu, Guohua

2016-01-27

Based on a laser diode, a 12 × 6 photodiode array sensor, and machine learning techniques, a new void fraction measurement method for gas-liquid two-phase flow in small channels is proposed. To overcome the influence of flow pattern on the void fraction measurement, the flow pattern of the two-phase flow is firstly identified by Fisher Discriminant Analysis (FDA). Then, according to the identification result, a relevant void fraction measurement model which is developed by Support Vector Machine (SVM) is selected to implement the void fraction measurement. A void fraction measurement system for the two-phase flow is developed and experiments are carried out in four different small channels. Four typical flow patterns (including bubble flow, slug flow, stratified flow and annular flow) are investigated. The experimental results show that the development of the measurement system is successful. The proposed void fraction measurement method is effective and the void fraction measurement accuracy is satisfactory. Compared with the conventional laser measurement systems using standard laser sources, the developed measurement system has the advantages of low cost and simple structure. Compared with the conventional void fraction measurement methods, the proposed method overcomes the influence of flow pattern on the void fraction measurement. This work also provides a good example of using low-cost laser diode as a competent replacement of the expensive standard laser source and hence implementing the parameter measurement of gas-liquid two-phase flow. The research results can be a useful reference for other researchers' works.

Impact and recovery process of mini flash crashes: An empirical study.

PubMed

Braun, Tobias; Fiegen, Jonas A; Wagner, Daniel C; Krause, Sebastian M; Guhr, Thomas

2018-01-01

In an Ultrafast Extreme Event (or Mini Flash Crash), the price of a traded stock increases or decreases strongly within milliseconds. We present a detailed study of Ultrafast Extreme Events in stock market data. In contrast to popular belief, our analysis suggests that most of the Ultrafast Extreme Events are not necessarily due to feedbacks in High Frequency Trading: In at least 60 percent of the observed Ultrafast Extreme Events, the largest fraction of the price change is due to a single market order. In times of financial crisis, large market orders are more likely which leads to a significant increase of Ultrafast Extreme Events occurrences. Furthermore, we analyze the 100 trades following each Ultrafast Extreme Events. While we observe a tendency of the prices to partially recover, less than 40 percent recover completely. On the other hand we find 25 percent of the Ultrafast Extreme Events to be almost recovered after only one trade which differs from the usually found price impact of market orders.

Impact and recovery process of mini flash crashes: An empirical study

PubMed Central

Wagner, Daniel C.; Krause, Sebastian M.; Guhr, Thomas

2018-01-01

In an Ultrafast Extreme Event (or Mini Flash Crash), the price of a traded stock increases or decreases strongly within milliseconds. We present a detailed study of Ultrafast Extreme Events in stock market data. In contrast to popular belief, our analysis suggests that most of the Ultrafast Extreme Events are not necessarily due to feedbacks in High Frequency Trading: In at least 60 percent of the observed Ultrafast Extreme Events, the largest fraction of the price change is due to a single market order. In times of financial crisis, large market orders are more likely which leads to a significant increase of Ultrafast Extreme Events occurrences. Furthermore, we analyze the 100 trades following each Ultrafast Extreme Events. While we observe a tendency of the prices to partially recover, less than 40 percent recover completely. On the other hand we find 25 percent of the Ultrafast Extreme Events to be almost recovered after only one trade which differs from the usually found price impact of market orders. PMID:29782503

Microbial community assembly and evolution in subseafloor sediment.

PubMed

Starnawski, Piotr; Bataillon, Thomas; Ettema, Thijs J G; Jochum, Lara M; Schreiber, Lars; Chen, Xihan; Lever, Mark A; Polz, Martin F; Jørgensen, Bo B; Schramm, Andreas; Kjeldsen, Kasper U

2017-03-14

Bacterial and archaeal communities inhabiting the subsurface seabed live under strong energy limitation and have growth rates that are orders of magnitude slower than laboratory-grown cultures. It is not understood how subsurface microbial communities are assembled and whether populations undergo adaptive evolution or accumulate mutations as a result of impaired DNA repair under such energy-limited conditions. Here we use amplicon sequencing to explore changes of microbial communities during burial and isolation from the surface to the >5,000-y-old subsurface of marine sediment and identify a small core set of mostly uncultured bacteria and archaea that is present throughout the sediment column. These persisting populations constitute a small fraction of the entire community at the surface but become predominant in the subsurface. We followed patterns of genome diversity with depth in four dominant lineages of the persisting populations by mapping metagenomic sequence reads onto single-cell genomes. Nucleotide sequence diversity was uniformly low and did not change with age and depth of the sediment. Likewise, there was no detectable change in mutation rates and efficacy of selection. Our results indicate that subsurface microbial communities predominantly assemble by selective survival of taxa able to persist under extreme energy limitation.

Three-dimensional murine airway segmentation in micro-CT images

NASA Astrophysics Data System (ADS)

Shi, Lijun; Thiesse, Jacqueline; McLennan, Geoffrey; Hoffman, Eric A.; Reinhardt, Joseph M.

2007-03-01

Thoracic imaging for small animals has emerged as an important tool for monitoring pulmonary disease progression and therapy response in genetically engineered animals. Micro-CT is becoming the standard thoracic imaging modality in small animal imaging because it can produce high-resolution images of the lung parenchyma, vasculature, and airways. Segmentation, measurement, and visualization of the airway tree is an important step in pulmonary image analysis. However, manual analysis of the airway tree in micro-CT images can be extremely time-consuming since a typical dataset is usually on the order of several gigabytes in size. Automated and semi-automated tools for micro-CT airway analysis are desirable. In this paper, we propose an automatic airway segmentation method for in vivo micro-CT images of the murine lung and validate our method by comparing the automatic results to manual tracing. Our method is based primarily on grayscale morphology. The results show good visual matches between manually segmented and automatically segmented trees. The average true positive volume fraction compared to manual analysis is 91.61%. The overall runtime for the automatic method is on the order of 30 minutes per volume compared to several hours to a few days for manual analysis.

Nanofocusing beyond the near-field diffraction limit via plasmonic Fano resonance.

PubMed

Song, Maowen; Wang, Changtao; Zhao, Zeyu; Pu, Mingbo; Liu, Ling; Zhang, Wei; Yu, Honglin; Luo, Xiangang

2016-01-21

The past decade has witnessed a great deal of optical systems designed for exceeding the Abbe's diffraction limit. Unfortunately, a deep subwavelength spot is obtained at the price of extremely short focal length, which is indeed a near-field diffraction limit that could rarely go beyond in the nanofocusing device. One method to mitigate such a problem is to set up a rapid oscillatory electromagnetic field that converges at the prescribed focus. However, abrupt modulation of phase and amplitude within a small fraction of a wavelength seems to be the main obstacle in the visible regime, aggravated by loss and plasmonic features that come into function. In this paper, we propose a periodically repeated ring-disk complementary structure to break the near-field diffraction limit via plasmonic Fano resonance, originating from the interference between the complex hybrid plasmon resonance and the continuum of propagating waves through the silver film. This plasmonic Fano resonance introduces a π phase jump in the adjacent channels and amplitude modulation to achieve radiationless electromagnetic interference. As a result, deep subwavelength spots as small as 0.0045λ(2) at 36 nm above the silver film have been numerically demonstrated. This plate holds promise for nanolithography, subdiffraction imaging and microscopy.

Finding binaries from phase modulation of pulsating stars with Kepler: V. Orbital parameters, with eccentricity and mass-ratio distributions of 341 new binaries

NASA Astrophysics Data System (ADS)

Murphy, Simon J.; Moe, Maxwell; Kurtz, Donald W.; Bedding, Timothy R.; Shibahashi, Hiromoto; Boffin, Henri M. J.

2018-03-01

The orbital parameters of binaries at intermediate periods (102-103 d) are difficult to measure with conventional methods and are very incomplete. We have undertaken a new survey, applying our pulsation timing method to Kepler light curves of 2224 main-sequence A/F stars and found 341 non-eclipsing binaries. We calculate the orbital parameters for 317 PB1 systems (single-pulsator binaries) and 24 PB2s (double-pulsators), tripling the number of intermediate-mass binaries with full orbital solutions. The method reaches down to small mass ratios q ≈ 0.02 and yields a highly homogeneous sample. We parametrize the mass-ratio distribution using both inversion and Markov-Chain Monte Carlo forward-modelling techniques, and find it to be skewed towards low-mass companions, peaking at q ≈ 0.2. While solar-type primaries exhibit a brown dwarf desert across short and intermediate periods, we find a small but statistically significant (2.6σ) population of extreme-mass-ratio companions (q < 0.1) to our intermediate-mass primaries. Across periods of 100-1500 d and at q > 0.1, we measure the binary fraction of current A/F primaries to be 15.4 per cent ± 1.4 per cent, though we find that a large fraction of the companions (21 per cent ± 6 per cent) are white dwarfs in post-mass-transfer systems with primaries that are now blue stragglers, some of which are the progenitors of Type Ia supernovae, barium stars, symbiotics, and related phenomena. Excluding these white dwarfs, we determine the binary fraction of original A/F primaries to be 13.9 per cent ± 2.1 per cent over the same parameter space. Combining our measurements with those in the literature, we find the binary fraction across these periods is a constant 5 per cent for primaries M1 < 0.8 M⊙, but then increases linearly with log M1, demonstrating that natal discs around more massive protostars M1 ≳ 1 M⊙ become increasingly more prone to fragmentation. Finally, we find the eccentricity distribution of the main-sequence pairs to be much less eccentric than the thermal distribution.

Numerical investigation of gapped edge states in fractional quantum Hall-superconductor heterostructures

NASA Astrophysics Data System (ADS)

Repellin, Cécile; Cook, Ashley M.; Neupert, Titus; Regnault, Nicolas

2018-03-01

Fractional quantum Hall-superconductor heterostructures may provide a platform towards non-abelian topological modes beyond Majoranas. However their quantitative theoretical study remains extremely challenging. We propose and implement a numerical setup for studying edge states of fractional quantum Hall droplets with a superconducting instability. The fully gapped edges carry a topological degree of freedom that can encode quantum information protected against local perturbations. We simulate such a system numerically using exact diagonalization by restricting the calculation to the quasihole-subspace of a (time-reversal symmetric) bilayer fractional quantum Hall system of Laughlin ν = 1/3 states. We show that the edge ground states are permuted by spin-dependent flux insertion and demonstrate their fractional 6π Josephson effect, evidencing their topological nature and the Cooper pairing of fractionalized quasiparticles. The versatility and efficiency of our setup make it a well suited method to tackle wider questions of edge phases and phase transitions in fractional quantum Hall systems.

Hubble Goes to the eXtreme to Assemble Farthest-Ever View of the Universe

NASA Image and Video Library

2017-12-08

NASA image release September 25, 2012 Like photographers assembling a portfolio of best shots, astronomers have assembled a new, improved portrait of mankind's deepest-ever view of the universe. Called the eXtreme Deep Field, or XDF, the photo was assembled by combining 10 years of NASA Hubble Space Telescope photographs taken of a patch of sky at the center of the original Hubble Ultra Deep Field. The XDF is a small fraction of the angular diameter of the full moon. The Hubble Ultra Deep Field is an image of a small area of space in the constellation Fornax, created using Hubble Space Telescope data from 2003 and 2004. By collecting faint light over many hours of observation, it revealed thousands of galaxies, both nearby and very distant, making it the deepest image of the universe ever taken at that time. The new full-color XDF image is even more sensitive, and contains about 5,500 galaxies even within its smaller field of view. The faintest galaxies are one ten-billionth the brightness of what the human eye can see. To read more go to:http://www.nasa.gov/mission_pages/hubble/science/xdf.html Credit: NASA; ESA; G. Illingworth, D. Magee, and P. Oesch, University of California, Santa Cruz; R. Bouwens, Leiden University; and the HUDF09 Team NASA image use policy. NASA Goddard Space Flight Center enables NASA’s mission through four scientific endeavors: Earth Science, Heliophysics, Solar System Exploration, and Astrophysics. Goddard plays a leading role in NASA’s accomplishments by contributing compelling scientific knowledge to advance the Agency’s mission. Follow us on Twitter Like us on Facebook Find us on Instagram

High-resolution spectroscopy of extremely metal-poor stars from SDSS/Segue. II. Binary fraction

DOE Office of Scientific and Technical Information (OSTI.GOV)

Aoki, Wako; Suda, Takuma; Beers, Timothy C.

2015-02-01

The fraction of binary systems in various stellar populations of the Galaxy and the distribution of their orbital parameters are important but not well-determined factors in studies of star formation, stellar evolution, and Galactic chemical evolution. While observational studies have been carried out for a large sample of nearby stars, including some metal-poor Population II stars, almost no constraints on the binary nature for extremely metal-poor (EMP; [Fe/H] <−3.0) stars have yet been obtained. Here we investigate the fraction of double-lined spectroscopic binaries and carbon-enhanced metal-poor (CEMP) stars, many of which could have formed as pairs of low-mass and intermediate-massmore » stars, to estimate the lower limit of the fraction of binary systems having short periods. The estimate is based on a sample of very metal-poor stars selected from the Sloan Digital Sky Survey and observed at high spectral resolution in a previous study by Aoki et al. That survey reported 3 double-lined spectroscopic binaries and 11 CEMP stars, which we consider along with a sample of EMP stars from the literature compiled in the SAGA database. We have conducted measurements of the velocity components for stacked absorption features of different spectral lines for each double-lined spectroscopic binary. Our estimate indicates that the fraction of binary stars having orbital periods shorter than 1000 days is at least 10%, and possibly as high as 20% if the majority of CEMP stars are formed in such short-period binaries. This result suggests that the period distribution of EMP binary systems is biased toward short periods, unless the binary fraction of low-mass EMP stars is significantly higher than that of other nearby stars.« less

Closing the Gap: An Analysis of Options for Improving the USAF Fighter Fleet from 2105 to 2035

DTIC Science & Technology

2015-10-01

capacity. The CBO predicts an increase in capacity for both large, or 2000 lbs class weapons, and small , either 500 lbs class or Small Diameter Bomb ...Laser Guided Bomb (LGB) designed to penetrate extremely hardened bunkers with extreme accuracy.54 Larger weapons can provide better standoff range...operate with impunity in low intensity CAS scenarios. While survivability, with the exception of against small arms ground fire, is far less a

Pharmacokinetics and N-acetylation metabolism of S-methyl-l-cysteine and trans-S-1-propenyl-l-cysteine in rats and dogs.

PubMed

Amano, Hirotaka; Kazamori, Daichi; Itoh, Kenji

2016-11-01

1. Pharmacokinetics and N-acetylation metabolism of S-methyl-L-cysteine (SMC) and trans-S-1-propenyl-L-cysteine (S1PC) were examined in rats and dogs. SMC and S1PC (2-5 mg/kg) were well absorbed in both species with high bioavailability (88-100%). 2. SMC and S1PC were excreted only to a small extent in the urine of rats and dogs. The small renal clearance values (<0.03 l/h/kg) indicated the extensive renal reabsorption of SMC and S1PC, which potentially contributed to their long elimination half-lives (>5 h) in dogs. 3. S1PC, but not SMC, underwent N-acetylation extensively in vivo, which can be explained by the relative activities of N-acetylation of S1PC/SMC and deacetylation of their N-acetylated forms, N-acetyl-S1PC/N-acetyl-SMC, in the liver and kidney in vitro. The activities for S1PC N-acetylation were similar to or higher than those for N-acetyl-S1PC deacetylation in liver S9 fractions of rat and dog, whereas liver and kidney S9 fractions of rat and dog had little activity for SMC N-acetylation or considerably higher activities for N-acetyl-SMC deacetylation. 4. Our study demonstrated that the pharmacokinetics of SMC and S1PC in rats and dogs was characterized by high bioavailability and extensive renal reabsorption; however, the extent of undergoing the N-acetylation metabolism was extremely different between SMC and S1PC.

Class I and II Small Heat Shock Proteins Together with HSP101 Protect Protein Translation Factors during Heat Stress.

PubMed

McLoughlin, Fionn; Basha, Eman; Fowler, Mary E; Kim, Minsoo; Bordowitz, Juliana; Katiyar-Agarwal, Surekha; Vierling, Elizabeth

2016-10-01

The ubiquitous small heat shock proteins (sHSPs) are well documented to act in vitro as molecular chaperones to prevent the irreversible aggregation of heat-sensitive proteins. However, the in vivo activities of sHSPs remain unclear. To investigate the two most abundant classes of plant cytosolic sHSPs (class I [CI] and class II [CII]), RNA interference (RNAi) and overexpression lines were created in Arabidopsis (Arabidopsis thaliana) and shown to have reduced and enhanced tolerance, respectively, to extreme heat stress. Affinity purification of CI and CII sHSPs from heat-stressed seedlings recovered eukaryotic translation elongation factor (eEF) 1B (α-, β-, and γ-subunits) and eukaryotic translation initiation factor 4A (three isoforms), although the association with CI sHSPs was stronger and additional proteins involved in translation were recovered with CI sHSPs. eEF1B subunits became partially insoluble during heat stress and, in the CI and CII RNAi lines, showed reduced recovery to the soluble cell fraction after heat stress, which was also dependent on HSP101. Furthermore, after heat stress, CI sHSPs showed increased retention in the insoluble fraction in the CII RNAi line and vice versa. Immunolocalization revealed that both CI and CII sHSPs were present in cytosolic foci, some of which colocalized with HSP101 and with eEF1Bγ and eEF1Bβ. Thus, CI and CII sHSPs have both unique and overlapping functions and act either directly or indirectly to protect specific translation factors in cytosolic stress granules. © 2016 American Society of Plant Biologists. All Rights Reserved.

Asymmetric electroosmotic pumping across porous media sandwiched with perforated ion-exchange membranes.

PubMed

Yaroshchuk, A; Licón, E E; Zholkovskiy, E K; Bondarenko, M P; Heldal, T

2017-07-01

To have non-zero net flow in AC electroosmotic pumps, the electroosmosis (EO) has to be non-linear and asymmetric. This can be achieved due to ionic concentration polarization. This is known to occur close to micro-/nano-interfaces provided that the sizes of the nanopores are not too large compared to the Debye screening length. However, operation of the corresponding EO pumps can be quite sensitive to the solution concentration and, thus, unstable in practical applications. Concentration polarization of ion-exchange membranes is much more robust. However, the hydraulic permeability of the membrane is very low, which makes EO flows through them extremely small. This communication shows theoretically how this problem can be resolved via making scarce microscopic perforations in an ion-exchange membrane and putting it in series with an EO-active nano-porous medium. The problem of coupled flow, concentration and electrostatic-potential distributions is solved numerically by using finite-element methods. This analysis reveals that even quite scarce perforations of micron-scale diameters are sufficient to observe practically-interesting EO flows in the system. If the average distance between the perforations is smaller than the thickness of the EO-active layer, there is an effective homogenization of the electrolyte concentration and hydrostatic pressure in the lateral direction at some distance from the interface. The simulations show this distance to be somewhat lower than the half-distance between the perforations. On the other hand, when the surface fraction of perforations is sufficiently small (below a fraction of a percent) this "homogeneous" concentration is considerably reduced (or increased, depending on the current direction), which makes the EO strongly non-linear and asymmetric. This analysis provides initial guidance for the design of high-productivity and inexpensive AC electroosmotic pumps.

A Specific Antibody to Neuropeptide AF1 (KNEFIRFamide) Recognizes a Small Subset of Neurons in Ascaris suum: Differences from Caenorhabditis elegans

PubMed Central

Sithigorngul, Paisarn; Jarecki, Jessica L.; Stretton, Antony O.W.

2016-01-01

A monoclonal antibody, AF1-003, highly specific to the Ascaris suum neuropeptide AF1 (KNEFIRFamide), was generated. This antibody binds strongly to AF1 and extremely weakly to other peptides with C-terminal FIR-Famide: AF5 (SGKPTFIRFamide), AF6 (FIRFamide), and AF7 (AGPRFIRFamide). It does not recognize 35 other AF (A. suum FMRFamide-like) peptides at the highest concentration tested, nor does it recognize FMRFamide. When crude peptide extracts of A. suum are fractionated by two-step HPLC, the only fractions recognized by AF1-003 are those comigrating with synthetic AF1. By immunocytochemistry, antibody AF1-003 recognizes a small subset of the 298 neurons of A. suum: these include the paired URX and RIP neurons, two pairs of lateral ganglion neurons in the head, and the unpaired PQR and PDA or -B tail neurons that send processes to the head along the dorsal and ventral nerve cords, respectively. AF1 immunoreactivity is also seen in three pairs of pharyngeal neurons. Mass spectroscopy (MS) shows the presence of AF1 in the head, pharynx, and dorsal and ventral nerve cords. In A. suum, the neurons that contain AF1 show little overlap with neurons that express green fluorescent protein constructs targeting the flp-8 gene, which encodes AF1 in Caenorhabditis elegans (Kim and Li [2004] J. Comp. Neurol. 475:540– 550); the URX neurons express AF1 in both species, but, in C. elegans, flp-8 expression was not detected in RIP, PQR, and PDA or -B or in the pharynx. Other, less specific monoclonal antibodies recognize AF1, as well as other peptides to differing degrees; these antibodies are useful reagents for determination of neuronal morphology. PMID:21452223

UPLC-MS-ELSD-PDA as a powerful dereplication tool to facilitate compound identification from small molecule natural product libraries

USDA-ARS?s Scientific Manuscript database

Generation of natural product libraries containing column fractions, each with only a few small molecules, by a high throughput, automated fractionation system has made it possible to implement an improved dereplication strategy for selection and prioritization of hits in a natural product discovery...

Nanofocusing beyond the near-field diffraction limit via plasmonic Fano resonance

NASA Astrophysics Data System (ADS)

Song, Maowen; Wang, Changtao; Zhao, Zeyu; Pu, Mingbo; Liu, Ling; Zhang, Wei; Yu, Honglin; Luo, Xiangang

2016-01-01

The past decade has witnessed a great deal of optical systems designed for exceeding the Abbe's diffraction limit. Unfortunately, a deep subwavelength spot is obtained at the price of extremely short focal length, which is indeed a near-field diffraction limit that could rarely go beyond in the nanofocusing device. One method to mitigate such a problem is to set up a rapid oscillatory electromagnetic field that converges at the prescribed focus. However, abrupt modulation of phase and amplitude within a small fraction of a wavelength seems to be the main obstacle in the visible regime, aggravated by loss and plasmonic features that come into function. In this paper, we propose a periodically repeated ring-disk complementary structure to break the near-field diffraction limit via plasmonic Fano resonance, originating from the interference between the complex hybrid plasmon resonance and the continuum of propagating waves through the silver film. This plasmonic Fano resonance introduces a π phase jump in the adjacent channels and amplitude modulation to achieve radiationless electromagnetic interference. As a result, deep subwavelength spots as small as 0.0045λ2 at 36 nm above the silver film have been numerically demonstrated. This plate holds promise for nanolithography, subdiffraction imaging and microscopy.The past decade has witnessed a great deal of optical systems designed for exceeding the Abbe's diffraction limit. Unfortunately, a deep subwavelength spot is obtained at the price of extremely short focal length, which is indeed a near-field diffraction limit that could rarely go beyond in the nanofocusing device. One method to mitigate such a problem is to set up a rapid oscillatory electromagnetic field that converges at the prescribed focus. However, abrupt modulation of phase and amplitude within a small fraction of a wavelength seems to be the main obstacle in the visible regime, aggravated by loss and plasmonic features that come into function. In this paper, we propose a periodically repeated ring-disk complementary structure to break the near-field diffraction limit via plasmonic Fano resonance, originating from the interference between the complex hybrid plasmon resonance and the continuum of propagating waves through the silver film. This plasmonic Fano resonance introduces a π phase jump in the adjacent channels and amplitude modulation to achieve radiationless electromagnetic interference. As a result, deep subwavelength spots as small as 0.0045λ2 at 36 nm above the silver film have been numerically demonstrated. This plate holds promise for nanolithography, subdiffraction imaging and microscopy. Electronic supplementary information (ESI) available: The plasmon hybridization modes have been analyzed. The transmittance, reflectance and absorbance have been plotted to have a better understanding of the coupling in a silver nanoring. The dependencies of the intensity enhancement on the total numbers of building blocks have been shown. See DOI: 10.1039/c5nr06504f

Relationship between diffusion tensor fractional anisotropy and motor outcome in patients with hemiparesis after corona radiata infarct.

PubMed

Koyama, Tetsuo; Marumoto, Kohei; Miyake, Hiroji; Domen, Kazuhisa

2013-11-01

This study examined the relationship between fractional anisotropy (FA) values of magnetic resonance-diffusion tensor imaging (DTI) and motor outcome (1 month after onset) in 15 patients with hemiparesis after ischemic stroke of corona radiata lesions. DTI data were obtained on days 14-18. FA values within the cerebral peduncle were analyzed using a computer-automated method. Motor outcome of hemiparesis was evaluated according to Brunnstrom stage (BRS; 6-point scale: severe to normal) for separate shoulder/elbow/forearm, wrist/hand, and lower extremity functions. The ratio of FA values in the affected hemisphere to those in the unaffected hemisphere (rFA) was assessed in relation to the BRS data (Spearman rank correlation test, P<.05). rFA values ranged from .715 to 1.002 (median=.924). BRS ranged from 1 to 6 (median=4) for shoulder/elbow/forearm, from 1 to 6 (median=5) for wrist/hand, and from 2 to 6 (median=4) for the lower extremities. Analysis revealed statistically significant relationships between rFA and upper extremity functions (correlation coefficient=.679 for shoulder/elbow/forearm and .706 for wrist/hand). Although slightly less evident, the relationship between rFA and lower extremity function was also statistically significant (correlation coefficient=.641). FA values within the cerebral peduncle are moderately associated with the outcome of both upper and lower extremity functions, suggesting that DTI may be applicable for outcome prediction in stroke patients with corona radiata infarct. Copyright © 2013 National Stroke Association. Published by Elsevier Inc. All rights reserved.

Structure and Dynamics of Bimodal Colloidal Dispersions in a Low-Molecular-Weight Polymer Solution

DOE PAGES

Zhang, Fan; Allen, Andrew J.; Levine, Lyle E.; ...

2017-02-24

We present an experimental study of the structural and dynamical properties of bimodal, micrometersized colloidal dispersions (size ratio ≈ 2) in an aqueous solution of low-molecular weight polymer (polyethylene glycol 2000) using synchrotron ultra-small angle X-ray scattering (USAXS) and USAXSbased X-ray photon correlation spectroscopy. We fixed the volume fraction of the large particles at 5 % and systematically increased the volume fraction of the small particles from 0 % to 5 % to evaluate its effect on the structure and dynamics. The bimodal dispersions were homogenous through the investigated parameter space. We found that the partial structure factors can bemore » satisfactorily retrieved for the bimodal colloidal dispersions using a Percus-Yevick hard sphere potential when the particle size distributions of the particles were taken into account. We also found that the partial structure factor between the large particles does not exhibit significant variation with increasing volume fraction of small particles, whereas the isothermal compressibility of the binary mixture was found to decrease with increasing volume fraction of small particles. The dynamics of single-component large particle dispersion obey the principles of de Gennes narrowing, where the wave vector dependence of the interparticle diffusion coefficient is inversely proportional to the interparticle structure factor. The dynamics of the bimodal dispersions demonstrate strong dependence on the fraction of small particles. As a result, we also made a comparison between the experimental effective dynamic viscosity of the bimodal dispersion with theoretical predictions, which suggest that the complex mutual interactions between large and small particles have a strong effect on the dynamic behaviors of bimodal dispersions.« less

Structure and Dynamics of Bimodal Colloidal Dispersions in a Low-Molecular-Weight Polymer Solution.

PubMed

Zhang, Fan; Allen, Andrew J; Levine, Lyle E; Tsai, De-Hao; Ilavsky, Jan

2017-03-21

We present an experimental study of the structural and dynamical properties of bimodal, micrometer-sized colloidal dispersions (size ratio ≈ 2) in an aqueous solution of low-molecular-weight polymer (polyethylene glycol 2000) using synchrotron ultra-small angle X-ray scattering (USAXS) and USAXS-based X-ray photon correlation spectroscopy. We fixed the volume fraction of the large particles at 5% and systematically increased the volume fraction of the small particles from 0 to 5% to evaluate their effects on the structure and dynamics. The bimodal dispersions were homogenous through the investigated parameter space. We found that the partial structure factors can be satisfactorily retrieved for the bimodal colloidal dispersions using a Percus-Yevick hard-sphere potential when the size distributions of the particles were taken into account. We also found that the partial structure factor between the large particles did not exhibit a significant variation with increasing volume fraction of the small particles, whereas the isothermal compressibility of the binary mixture was found to decrease with increasing volume fraction of the small particles. The dynamics of single-component large-particle dispersion obey the principles of de Gennes narrowing, where the wave vector dependence of the interparticle diffusion coefficient is inversely proportional to the interparticle structure factor. The dynamics of the bimodal dispersions demonstrate a strong dependence on the fraction of small particles. We also made a comparison between the experimental effective dynamic viscosity of the bimodal dispersion with the theoretical predictions, which suggest that the complex mutual interactions between the large and small particles have a strong effect on the dynamic behaviors of bimodal dispersions.

Structure and Dynamics of Bimodal Colloidal Dispersions in a Low-Molecular-Weight Polymer Solution

DOE Office of Scientific and Technical Information (OSTI.GOV)

Zhang, Fan; Allen, Andrew J.; Levine, Lyle E.

We present an experimental study of the structural and dynamical properties of bimodal, micrometersized colloidal dispersions (size ratio ≈ 2) in an aqueous solution of low-molecular weight polymer (polyethylene glycol 2000) using synchrotron ultra-small angle X-ray scattering (USAXS) and USAXSbased X-ray photon correlation spectroscopy. We fixed the volume fraction of the large particles at 5 % and systematically increased the volume fraction of the small particles from 0 % to 5 % to evaluate its effect on the structure and dynamics. The bimodal dispersions were homogenous through the investigated parameter space. We found that the partial structure factors can bemore » satisfactorily retrieved for the bimodal colloidal dispersions using a Percus-Yevick hard sphere potential when the particle size distributions of the particles were taken into account. We also found that the partial structure factor between the large particles does not exhibit significant variation with increasing volume fraction of small particles, whereas the isothermal compressibility of the binary mixture was found to decrease with increasing volume fraction of small particles. The dynamics of single-component large particle dispersion obey the principles of de Gennes narrowing, where the wave vector dependence of the interparticle diffusion coefficient is inversely proportional to the interparticle structure factor. The dynamics of the bimodal dispersions demonstrate strong dependence on the fraction of small particles. As a result, we also made a comparison between the experimental effective dynamic viscosity of the bimodal dispersion with theoretical predictions, which suggest that the complex mutual interactions between large and small particles have a strong effect on the dynamic behaviors of bimodal dispersions.« less

Revealing the ultrafast outflow in IRAS 13224-3809 through spectral variability

NASA Astrophysics Data System (ADS)

Parker, M. L.; Alston, W. N.; Buisson, D. J. K.; Fabian, A. C.; Jiang, J.; Kara, E.; Lohfink, A.; Pinto, C.; Reynolds, C. S.

2017-08-01

We present an analysis of the long-term X-ray variability of the extreme narrow-line Seyfert 1 galaxy IRAS 13224-3809 using principal component analysis (PCA) and fractional excess variability (Fvar) spectra to identify model-independent spectral components. We identify a series of variability peaks in both the first PCA component and Fvar spectrum which correspond to the strongest predicted absorption lines from the ultrafast outflow (UFO) discovered by Parker et al. (2017). We also find higher order PCA components, which correspond to variability of the soft excess and reflection features. The subtle differences between RMS and PCA results argue that the observed flux-dependence of the absorption is due to increased ionization of the gas, rather than changes in column density or covering fraction. This result demonstrates that we can detect outflows from variability alone and that variability studies of UFOs are an extremely promising avenue for future research.

Molecular Gas Heating Mechanisms, and Star Formation Feedback in Merger/Starbursts: NGC 6240 and Arp 193 as Case Studies

NASA Astrophysics Data System (ADS)

Papadopoulos, Padelis P.; Zhang, Zhi-Yu; Xilouris, E. M.; Weiss, Axel; van der Werf, Paul; Israel, F. P.; Greve, T. R.; Isaak, Kate G.; Gao, Y.

2014-06-01

We used the SPIRE/FTS instrument aboard the Herschel Space Observatory to obtain the Spectral Line Energy Distributions (SLEDs) of CO from J = 4-3 to J = 13-12 of Arp 193 and NGC 6240, two classical merger/starbursts selected from our molecular line survey of local Luminous Infrared Galaxies (L IR >= 1011 L ⊙). The high-J CO SLEDs are then combined with ground-based low-J CO, 13CO, HCN, HCO+, CS line data and used to probe the thermal and dynamical states of their large molecular gas reservoirs. We find the two CO SLEDs strongly diverging from J = 4-3 onward, with NGC 6240 having a much higher CO line excitation than Arp 193, despite their similar low-J CO SLEDs and L FIR/L CO, 1 - 0, L HCN/L CO (J = 1-0) ratios (proxies of star formation efficiency and dense gas mass fraction). In Arp 193, one of the three most extreme starbursts in the local universe, the molecular SLEDs indicate a small amount (~5%-15%) of dense gas (n >= 104 cm-3) unlike NGC 6240 where most of the molecular gas (~60%-70%) is dense (n ~ (104-105) cm-3). Strong star-formation feedback can drive this disparity in their dense gas mass fractions, and also induce extreme thermal and dynamical states for the molecular gas. In NGC 6240, and to a lesser degree in Arp 193, we find large molecular gas masses whose thermal states cannot be maintained by FUV photons from Photon-Dominated Regions. We argue that this may happen often in metal-rich merger/starbursts, strongly altering the initial conditions of star formation. ALMA can now directly probe these conditions across cosmic epoch, and even probe their deeply dust-enshrouded outcome, the stellar initial mass function averaged over galactic evolution.

Extreme event statistics in a drifting Markov chain

NASA Astrophysics Data System (ADS)

Kindermann, Farina; Hohmann, Michael; Lausch, Tobias; Mayer, Daniel; Schmidt, Felix; Widera, Artur

2017-07-01

We analyze extreme event statistics of experimentally realized Markov chains with various drifts. Our Markov chains are individual trajectories of a single atom diffusing in a one-dimensional periodic potential. Based on more than 500 individual atomic traces we verify the applicability of the Sparre Andersen theorem to our system despite the presence of a drift. We present detailed analysis of four different rare-event statistics for our system: the distributions of extreme values, of record values, of extreme value occurrence in the chain, and of the number of records in the chain. We observe that, for our data, the shape of the extreme event distributions is dominated by the underlying exponential distance distribution extracted from the atomic traces. Furthermore, we find that even small drifts influence the statistics of extreme events and record values, which is supported by numerical simulations, and we identify cases in which the drift can be determined without information about the underlying random variable distributions. Our results facilitate the use of extreme event statistics as a signal for small drifts in correlated trajectories.

15N Fractionation in Star-Forming Regions and Solar System Objects

NASA Technical Reports Server (NTRS)

Wirstrom, Eva; Milam, Stefanie; Adande, GIlles; Charnley, Steven; Cordiner, Martin

2015-01-01

A central issue for understanding the formation and evolution of matter in the early Solar System is the relationship between the chemical composition of star-forming interstellar clouds and that of primitive Solar System materials. The pristinemolecular content of comets, interplanetary dust particles and carbonaceous chondrites show significant bulk nitrogen isotopic fractionation relative to the solar value, 14N15N 440. In addition, high spatial resolution measurements in primitive materials locally show even more extreme enhancements of 14N15N 100.

76 FR 29251 - Guidance for Industry and Food and Drug Administration Staff; Class II Special Controls; Guidance...

Federal Register 2010, 2011, 2012, 2013, 2014

2011-05-20

...: Topical Oxygen Chamber for Extremities; Availability; Correction AGENCY: Food and Drug Administration, HHS... Special Controls Guidance Documents: Topical Oxygen Chamber for Extremities.'' The document published... Oxygen Chamber for Extremities'' to the Division of Small Manufacturers, International, and Consumer...

Retention of stored water enables tropical tree saplings to survive extreme drought conditions.

PubMed

Wolfe, Brett T

2017-04-01

Trees generally maintain a small safety margin between the stem water potential (Ψstem) reached during seasonal droughts and the Ψstem associated with their mortality. This pattern may indicate that species face similar mortality risk during extreme droughts. However, if tree species vary in their ability to regulate Ψstem, then safety margins would poorly predict drought mortality. To explore variation among species in Ψstem regulation, I subjected potted saplings of six tropical tree species to extreme drought and compared their responses with well-watered plants and pretreatment reference plants. In the drought treatment, soil water potential reached <-10 MPa, yet three species, Bursera simaruba (L.) Sarg., Cavanillesia platanifolia (Bonpl.) Kunth and Cedrela odorata L. had 100% survival and maintained Ψstem near -1 MPa (i.e., desiccation-avoiding species). Three other species, Cojoba rufescens (Benth.) Britton and Rose, Genipa americana L. and Hymenaea courbaril L. had 50%, 0% and 25% survival, respectively, and survivors had Ψstem <-6 MPa (i.e., desiccation-susceptible species). The desiccation-avoiding species had lower relative water content (RWC) in all organs and tissues (root, stem, bark and xylem) in the drought treatment than in the reference plants (means 72.0-90.4% vs 86.9-97.9%), but the survivors of the desiccation-susceptible C. rufescens had much lower RWC in the drought treatment (44.5-72.1%). Among the reference plants, the desiccation-avoiding species had lower tissue density, leaf-mass fraction and lateral-root surface area (LRA) than the desiccation-susceptible species. Additionally, C. platanifolia and C. odorata had reduced LRA in the drought treatment, which may slow water loss into dry soil. Together, these results suggest that the ability to regulate Ψstem during extreme drought is associated with functional traits that favor retention of stored water and that safety margins during seasonal drought poorly predict survival during extreme drought. © The Author 2017. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

200 million years of komatiite evolution in the Barberton Greenstone Belt, South Africa

NASA Astrophysics Data System (ADS)

Christoph, Robin; Arndt, Nick; Byerly, Gary; Puchtel, Igor; Blichert-Toft, Janne; Wilson, Allan

2010-05-01

Komatiites with complex and contrasting chemical compositions erupted throughout the 200 m.y. history of the Barberton greenstone belt in South Africa. The oldest well-preserved examples, from the ca. 3.5 Ga Komati Formation, display a range of volcanic structures, from thin differentiated spinifex-textured flows to much thicker flows or sills composed mainly of massive olivine cumulate. Pyroxene spinifex layers that cap the latter units indicate crystallization from komatiitic basaltic liquids. Although some rare, unusually coarse, vesicular, completely serpentinized units may have contained a small fraction of water, most of the flows are essentially anhydrous. Two geochemical types are present in the Komati Fm; Al-depleted komatiites with moderately enriched LREE and depleted HREE, and Al-undepleted komatiites with near-chondritic REE ratios. Komatiites from the 3.2 Ga Mendon and Weltevreden Fm display two patterns -Al-undepleted with near-chondritic REE ratios and Al-enriched with extremely low REE concentrations and marked depletion of LREE. In many units, both geochemical types are present. The Al- and HREE-depletion of Komati Fm magmas indicates that residual garnet was retained in the mantle source and their high MgO contents require that melting was at great depth. Up to 30% batch melting at 300 km depth is indicated; the high percentage of batch melting is possible because melt is neutrally buoyant at these depths. The Al-undepleted to enrichedmagmas formed by up to 50% cumulative fractional melting that terminated at shallower depth. The. presence of both types inseveral units points to complex dynamics in the mantle plumes that yielded these magmas. Epsilon Nd in all Barbertonkomatiites ranges from 0 to +2; epsilon Hf from +2 to +7; gamma Os from 0 to +3.7. The combination of fractionated REE, positive epsilon Nd and Hf, and near-chondritic Os in certain komatiites is attributed to differentiation of the komatiite sourcevery early in Earth history followed by fractionation during komatiite formation.

Crystal settling and crystal growth caused by Ostwald Ripening in a terrestrial magma ocean under rotation

NASA Astrophysics Data System (ADS)

Maas, C.; Moeller, A.; Hansen, U.

2013-12-01

About 4.5 billion years ago the earth was covered by a heavily convecting and rotating global magma ocean which was caused by an impact of a mars-sized impactor in a later stage of the earth's accretion. After the separation of metal and silicate (see A. Möller, U. Hansen (2013)) and the formation of the earth's core it began to crystallize. Small silicate crystals emerge and grow by Ostwald Ripening when the fluid is supersaturated. This process results in shrinking of small crystals and growing of large crystals on behalf of the smaller ones. This leads to an altering of the crystal settling time. One question which is still under great debate is whether fractional or equilibrium crystallization occurred in the magma ocean. Fractional crystallization means that different mineral fractions settle one after the other which would lead to a strongly differentiated mantle after solidification of the magma ocean. In contrast to that equilibrium crystallization would result in a well mixed mantle. Whether fractional or equilibrium crystallization occurred is for example important for the starting model of plate tectonics or the understanding of the mantle development until today. To study the change of crystal radius in a convecting and rotating magma ocean we employed a 3D numerical model. Due to the low viscosity and strong rotation the influence of rotation on the early magma Ocean cannot be neglected. In the model the crystals are able to influence each other and the fluid flow. They are able to grow, shrink, vanish and form and gravitational, Coriolis and drag forces due to the fluid act on them. In our present work we study the crystal settling depending on different rotation rates and rotation axes with two configurations. For the polar setting the rotation axis is parallel, at the equator it is perpendicular to gravity. Low rotation at the pole leads to a large fraction of suspended crystals. With increasing rotation the crystals settle and form a thick layer at the bottom of the magma ocean. At the equator we find three regimes (see A. Möller, U. Hansen (2013)) depending on the rotation strength. At low rotation a high fraction of silicate crystals settle at the bottom. At higher rotation the crystals form a thick layer in the bottom 1/3 of box. At high rotation all crystals are suspended and we observe a ribbon structure in the middle of the box. With a second model we investigate growing and shrinking of crystals by Ostwald Ripening and include formation and melting. In general we observe the same behaviour and regimes as described above, however due to Ostwald Ripening the evolution of crystal radius with time depends on the strength of rotation and on the orientation of the rotation axis. Very first results show that at the pole the growth of the silicate crystals is limited. The resulting small radius leads to a slow crystal settling. At the equator the crystals are able to grow larger than at the pole and therefore settle faster. This could lead to an asymmetrical crystallization of the magma ocean. In an extreme case due to the different settling times this could lead to a well mixed mantle at the pole whereas at the equator the mantle could be strongly differentiated after the solidification of the magma ocean.

Monitoring Cellular Events in Living Mast Cells Stimulated with an Extremely Small Amount of Fluid on a Microchip

NASA Astrophysics Data System (ADS)

Munaka, Tatsuya; Abe, Hirohisa; Kanai, Masaki; Sakamoto, Takashi; Nakanishi, Hiroaki; Yamaoka, Tetsuji; Shoji, Shuichi; Murakami, Akira

2006-07-01

We successfully developed a measurement system for real-time analysis of cellular function using a newly designed microchip. This microchip was equipped with a micro cell incubation chamber (240 nl) and was stimulated by a very small amount of stimuli (as small as 24 nl). Using the microchip system, cultivation of mast cells was successfully carried out. Monitoring of the cellular events after stimulation with an extremely small amount of fluid on a microchip was performed. This system could be applicable for various types of cellular analysis including real-time monitoring of cellular response by stimulation.

Proteomic analysis of exosomes from human neural stem cells by flow field-flow fractionation and nanoflow liquid chromatography-tandem mass spectrometry.

PubMed

Kang, Dukjin; Oh, Sunok; Ahn, Sung-Min; Lee, Bong-Hee; Moon, Myeong Hee

2008-08-01

Exosomes, small membrane vesicles secreted by a multitude of cell types, are involved in a wide range of physiological roles such as intercellular communication, membrane exchange between cells, and degradation as an alternative to lysosomes. Because of the small size of exosomes (30-100 nm) and the limitations of common separation procedures including ultracentrifugation and flow cytometry, size-based fractionation of exosomes has been challenging. In this study, we used flow field-flow fractionation (FlFFF) to fractionate exosomes according to differences in hydrodynamic diameter. The exosome fractions collected from FlFFF runs were examined by transmission electron microscopy (TEM) to morphologically confirm their identification as exosomes. Exosomal lysates of each fraction were digested and analyzed using nanoflow LC-ESI-MS-MS for protein identification. FIFFF, coupled with mass spectrometry, allows nanoscale size-based fractionation of exosomes and is more applicable to primary cells and stem cells since it requires much less starting material than conventional gel-based separation, in-gel digestion and the MS-MS method.

Extreme UV induced dissociation of amorphous solid water and crystalline water bilayers on Ru(0001)

NASA Astrophysics Data System (ADS)

Liu, Feng; Sturm, J. M.; Lee, Chris J.; Bijkerk, Fred

2016-04-01

The extreme ultraviolet (EUV, λ = 13.5 nm) induced dissociation of water layers on Ru(0001) was investigated. We irradiated amorphous and crystalline water layers on a Ru crystal with EUV light, and measured the surface coverage of remaining water and oxygen as a function of radiation dose by temperature programmed desorption (TPD). The main reaction products are OH and H with a fraction of oxygen from fully dissociated water. TPD spectra from a series of exposures reveal that EUV promotes formation of the partially dissociated water overlayer on Ru. Furthermore, loss of water due to desorption and dissociation is also observed. The water loss cross sections for amorphous and crystalline water are measured at 9 ± 2 × 10- 19 cm2 and 5 ± 1 × 10- 19 cm2, respectively. Comparison between the two cross sections suggests that crystalline water is more stable against EUV induced desorption/dissociation. The dissociation products can oxidize the Ru surface. For this early stage of oxidation, we measured a smaller (compared to water loss) cross section at 2 × 10- 20 cm2, which is 2 orders of magnitude smaller than the photon absorption cross section (at 92 eV) of gas phase water. The secondary electron (SE) contributions to the cross sections are also estimated. From our estimation, SE only forms a small part (20-25%) of the observed photon cross section.

In vitro encystment of Himasthla elongata cercariae (Digenea, Echinostomatidae) in the haemolymph of blue mussels Mytilus edulis as a tool for assessing cercarial infectivity and molluscan susceptibility.

PubMed

Levakin, I A; Losev, E A; Nikolaev, K E; Galaktionov, K V

2013-06-01

Infectivity of Himasthla elongata cercariae to mussels, their second intermediate hosts, and resistance by these hosts to infection were assessed on the basis of the cercariae's ability to encyst in mussel haemolymph in vitro. A series of experimental in vivo infections of mussels with batches of cercariae, each batch released from a different single infected mollusc and referred to as a clone (due to their shared genotype), demonstrated that the results of the in vitro tests corresponded to the actual indices of infectivity/susceptibility of the parasites and their hosts. Most cercarial clones had high infectivity, with a few clones having very high or, at the other extreme, very low infectivity. A similar pattern was revealed in mussel resistance to cercarial infection. Most of the molluscs tested were moderately susceptible to cercarial infection, but at each extreme a small fraction (less than 10%) displayed very high or very low susceptibility. It was shown that there were no totally compatible or totally incompatible 'cercaria clone/mussel' combinations. Results obtained are compared with the data on intra-population variability using the characters parasite infectivity/host compatibility for trematode/mollusc-first intermediate host associations. Results are made relevant to actual infection levels in mussel settlements at the White Sea.

An assessment of precipitation and surface air temperature over China by regional climate models

NASA Astrophysics Data System (ADS)

Wang, Xueyuan; Tang, Jianping; Niu, Xiaorui; Wang, Shuyu

2016-12-01

An analysis of a 20-year summer time simulation of present-day climate (1989-2008) over China using four regional climate models coupled with different land surface models is carried out. The climatic means, interannual variability, linear trends, and extremes are examined, with focus on precipitation and near surface air temperature. The models are able to reproduce the basic features of the observed summer mean precipitation and temperature over China and the regional detail due to topographic forcing. Overall, the model performance is better for temperature than that of precipitation. The models reasonably grasp the major anomalies and standard deviations over China and the five subregions studied. The models generally reproduce the spatial pattern of high interannual variability over wet regions, and low variability over the dry regions. The models also capture well the variable temperature gradient increase to the north by latitude. Both the observed and simulated linear trend of precipitation shows a drying tendency over the Yangtze River Basin and wetting over South China. The models capture well the relatively small temperature trends in large areas of China. The models reasonably simulate the characteristics of extreme precipitation indices of heavy rain days and heavy precipitation fraction. Most of the models also performed well in capturing both the sign and magnitude of the daily maximum and minimum temperatures over China.

Shotgun Proteomics of Aspergillus niger Microsomes upon d-Xylose Induction▿ †

PubMed Central

de Oliveira, José Miguel P. Ferreira; van Passel, Mark W. J.; Schaap, Peter J.; de Graaff, Leo H.

2010-01-01

Protein secretion plays an eminent role in cell maintenance and adaptation to the extracellular environment of microorganisms. Although protein secretion is an extremely efficient process in filamentous fungi, the mechanisms underlying protein secretion have remained largely uncharacterized in these organisms. In this study, we analyzed the effects of the d-xylose induction of cellulase and hemicellulase enzyme secretion on the protein composition of secretory organelles in Aspergillus niger. We aimed to systematically identify the components involved in the secretion of these enzymes via mass spectrometry of enriched subcellular microsomal fractions. Under each condition, fractions enriched for secretory organelles were processed for tandem mass spectrometry, resulting in the identification of peptides that originate from 1,081 proteins, 254 of which—many of them hypothetical proteins—were predicted to play direct roles in the secretory pathway. d-Xylose induction led to an increase in specific small GTPases known to be associated with polarized growth, exocytosis, and endocytosis. Moreover, the endoplasmic-reticulum-associated degradation (ERAD) components Cdc48 and all 14 of the 20S proteasomal subunits were recruited to the secretory organelles. In conclusion, induction of extracellular enzymes results in specific changes in the secretory subproteome of A. niger, and the most prominent change found in this study was the recruitment of the 20S proteasomal subunits to the secretory organelles. PMID:20453123

Efficient calculation of many-body induced electrostatics in molecular systems

DOE Office of Scientific and Technical Information (OSTI.GOV)

McLaughlin, Keith, E-mail: kmclaugh@mail.usf.edu; Cioce, Christian R.; Pham, Tony

Potential energy functions including many-body polarization are in widespread use in simulations of aqueous and biological systems, metal-organics, molecular clusters, and other systems where electronically induced redistribution of charge among local atomic sites is of importance. The polarization interactions, treated here via the methods of Thole and Applequist, while long-ranged, can be computed for moderate-sized periodic systems with extremely high accuracy by extending Ewald summation to the induced fields as demonstrated by Nymand, Sala, and others. These full Ewald polarization calculations, however, are expensive and often limited to very small systems, particularly in Monte Carlo simulations, which may require energymore » evaluation over several hundred-thousand configurations. For such situations, it shall be shown that sufficiently accurate computation of the polarization energy can be produced in a fraction of the central processing unit (CPU) time by neglecting the long-range extension to the induced fields while applying the long-range treatments of Ewald or Wolf to the static fields; these methods, denoted Ewald E-Static and Wolf E-Static (WES), respectively, provide an effective means to obtain polarization energies for intermediate and large systems including those with several thousand polarizable sites in a fraction of the CPU time. Furthermore, we shall demonstrate a means to optimize the damping for WES calculations via extrapolation from smaller trial systems.« less

Detailed investigation of causes of avionics field failures

NASA Astrophysics Data System (ADS)

Kallis, J. M.; Buechler, D. W.; Richardson, Z. C.; Backes, P. G.; Lopez, S. B.; Erickson, J. J.; van Westerhuyzen, D. H.

A detailed analysis of digital and analog modules from the F-15 AN/APG-63 Radar was performed to identify the kinds, types, and number of life models based on observed failure modes, mechanisms, locations, and characteristics needed to perform a Failure Free Operating Period prediction for these items. It is found that a significant fraction of the failures of the analog module and a small fraction of those of the digital module resulted from the exacerbation of latent defects by environmental stresses. It is also found that the fraction of failures resulting from thermal cycling and vibration is small.

36 CFR 254.34 - Mineral survey fractions.

Code of Federal Regulations, 2013 CFR

2013-07-01

... 36 Parks, Forests, and Public Property 2 2013-07-01 2013-07-01 false Mineral survey fractions. 254... LANDOWNERSHIP ADJUSTMENTS Conveyance of Small Tracts § 254.34 Mineral survey fractions. (a) Mineral survey...) Forest Service officials shall consider the following criteria in determining whether to convey mineral...

Extremism without extremists: Deffuant model with emotions

NASA Astrophysics Data System (ADS)

Sobkowicz, Pawel

2015-03-01

The frequent occurrence of extremist views in many social contexts, often growing from small minorities to almost total majority, poses a significant challenge for democratic societies. The phenomenon can be described within the sociophysical paradigm. We present a modified version of the continuous bounded confidence opinion model, including a simple description of the influence of emotions on tolerances, and eventually on the evolution of opinions. Allowing for psychologically based correlation between the extreme opinions, high emotions and low tolerance for other people's views leads to quick dominance of the extreme views within the studied model, without introducing a special class of agents, as has been done in previous works. This dominance occurs even if the initial numbers of people with extreme opinions is very small. Possible suggestions related to mitigation of the process are briefly discussed.

Microfiltration of raw whole milk to select fractions with different fat globule size distributions: process optimization and analysis.

PubMed

Michalski, M C; Leconte, N; Briard-Bion, V; Fauquant, J; Maubois, J L; Goudédranche, H

2006-10-01

We present an extensive description and analysis of a microfiltration process patented in our laboratory to separate different fractions of the initial milk fat globule population according to the size of the native milk fat globules (MFG). We used nominal membrane pore sizes of 2 to 12 microm and a specially designed pilot rig. Using this process with whole milk [whose MFG have a volume mean diameter (d43) = 4.2 +/- 0.2 microm] and appropriate membrane pore size and hydrodynamic conditions, we collected 2 extremes of the initial milk fat globule distribution consisting of 1) a retentate containing large MFG of d43 = 5 to 7.5 microm (with up to 250 g/kg of fat, up to 35% of initial milk fat, and up to 10% of initial milk volume), and 2) a permeate containing small MFG of d43 = 0.9 to 3.3 microm (with up to 16 g/kg of fat, up to 30% of initial milk fat, and up to 83% of initial milk volume and devoid of somatic cells). We checked that the process did not mechanically damage the MFG by measuring their zeta-potential. This new microfiltration process, avoiding milk aging, appears to be more efficient than gravity separation in selecting native MFG of different sizes. As we summarize from previous and new results showing that the physico-chemical and technological properties of native milk fat globules vary according to their size, the use of different fat globule fractions appears to be advantageous regarding the quality of cheeses and can lead to new dairy products with adapted properties (sensory, functional, and perhaps nutritional).

Carbon isotope discrepancy between precambrian stromatolites and their modern analogs: Inferences from hypersaline microbial mats of the sinai coast

NASA Astrophysics Data System (ADS)

Schidlowski, Manfred

1985-12-01

The isotopic composition of organic carbon from extant stromatolite-type microbial ecosystems is commonly slanted toward heavy δ13 C values as compared to respective compositions of average organic matter (including that from Precambrian stromatolites). This seems the more enigmatic as the bulk of primary producers from benthic microbial communities are known to fix carbon via the C3 pathway normally entailing the sizable fractionations of the RuBP carboxylase reaction. There is reason to believe that the small fractionations displayed by aquatic microorganisms result from the limitations of a diffusion-controlled assimilatory pathway in which the isotope effect of the enzymatic reaction is largely suppressed. Apart from the diffusion-control exercised by the aqueous environment, transport of CO2 to the photosynthetically active sites will be further impeded by the protective slime (polysaccharide) coatings commonly covering microbial mats in which gas diffusivities are extremely low. Ineffective discrimination against13C becomes, however, most pronounced in hypersaline environments where substantially reduced CO2 solubilities tend to push carbon into the role of a limiting nutrient (brine habitats constitute preferential sanctuaries of mat-forming microbenthos since the emergence of Metazoan grazers ˜ 0.7 Ga ago). As the same microbial communities had been free to colonize normal marine environments during the Precambrian, the CO2 concentration effect was irrelevant to the carbon-fixing pathway of these ancient forms. Therefore, it might not surprise that organic matter from Precambrian stromatolites displays the large fractionations commonly associated with C3 photosynthesis. Increased mixing ratios of CO2 in the Precambrian atmosphere may have additionally contributed to the elimination of the diffusion barrier in the carbon-fixing pathways of ancient mat-forming microbiota.

Environmental chemical data for perishable sediments and soils collected in New Orleans, Louisiana, and along the Louisiana Delta following Hurricanes Katrina and Rita, 2005

USGS Publications Warehouse

Witt, Emitt C.; Shi, Honglan; Karstensen, Krista A.; Wang, Jianmin; Adams, Craig D.

2008-01-01

In October 2005, nearly one month after Hurricanes Katrina and Rita, a team of scientists from the U.S. Geological Survey and the Missouri University of Science and Technology deployed to southern Louisiana to collect perishable environmental data resulting from the impacts of these storms. Perishable samples collected for this investigation are subject to destruction or ruin by removal, mixing, or natural decay; therefore, collection is time-critical following the depositional event. A total of 238 samples of sediment, soil, and vegetation were collected to characterize chemical quality. For this analysis, 157 of the 238 samples were used to characterize trace element, iron, total organic carbon, pesticide, and polychlorinated biphenyl concentrations of deposited sediment and associated shallow soils. In decreasing order, the largest variability in trace element concentration was detected for lead, vanadium, chromium, copper, arsenic, cadmium, and mercury. Lead was determined to be the trace element of most concern because of the large concentrations present in the samples ranging from 4.50 to 551 milligrams per kilogram (mg/kg). Sequential extraction analysis of lead indicate that 39.1 percent of the total lead concentration in post-hurricane sediment is associated with the iron-manganese oxide fraction. This fraction is considered extremely mobile under reducing environmental conditions, thereby making lead a potential health hazard. The presence of lead in post-hurricane sediments likely is from redistribution of pre-hurricane contaminated soils and sediments from Lake Pontchartrain and the flood control canals of New Orleans. Arsenic concentrations ranged from 0.84 to 49.1 mg/kg. Although Arsenic concentrations generally were small and consistent with other research results, all samples exceeded the U.S. Environmental Protection Agency’s Human Health Medium-Specific Screening Level of 0.39 mg/kg. Mercury concentrations ranged from 0.02 to 1.30 mg/kg. Comparing the mean mercury concentration present in post-hurricane samples with regional background data from the U.S. Geological Survey National Geochemical Dataset, indicates that mercury concentrations in post-hurricane sediment generally are larger. Sequential extraction analysis of 51 samples for arsenic indicate that 54.5 percent of the total arsenic concentration is contained in the extremely mobile iron-manganese oxide fraction. Pesticide and polychlorinated biphenyl Arochlor concentrations in post-hurricane samples were small. Prometon was the most frequently detected pesticide with concentrations ranging from 2.4 to 193 micrograms per kilogram (µg/kg). Methoxychlor was present in 22 samples with a concentration ranging from 3.5 to 3,510 µg/kg. Although methoxychlor had the largest detected pesticide concentration, it was well below the U.S. Environmental Protection Agency’s High-Priority Screening Level for residential soils. Arochlor congeners were not detected for any sample above the minimum detection level of 7.9 µg/kg.

Multiphase flowmeter successfully measures three-phase flow at extremely high gas-volume fractions -- Gulf of Suez, Egypt

DOE Office of Scientific and Technical Information (OSTI.GOV)

Leggett, R.B.; Borling, D.C.; Powers, B.S.

1998-02-01

A multiphase flowmeter (MPFM) installed in offshore Egypt has accurately measured three-phase flow in extremely gassy flow conditions. The meter is completely nonintrusive, with no moving parts, requires no flow mixing before measurement, and has no bypass loop to remove gas before multiphase measurement. Flow regimes observed during the field test of this meter ranged from severe slugging to annular flow caused by the dynamics of gas-lift gas in the production stream. Average gas-volume fraction ranged from 93 to 98% during tests conducted on seven wells. The meter was installed in the Gulf of Suez on a well protector platformmore » in the Gulf of Suez Petroleum Co. (Gupco) October field, and was placed in series with a test separator located on a nearby production platform. Wells were individually tested with flow conditions ranging from 1,300 to 4,700 B/D fluid, 2.4 to 3.9 MMscf/D of gas, and water cuts from 1 to 52%. The meter is capable of measuring water cuts up to 100%. Production was routed through both the MPFM and the test separator simultaneously as wells flowed with the assistance of gas-lift gas. The MPFM measured gas and liquid rates to within {+-} 10% of test-separator reference measurement flow rates, and accomplished this at gas-volume fractions from 93 to 96%. At higher gas-volume fractions up to 98%, accuracy deteriorated but the meter continued to provide repeatable results.« less

Stability and delay sensitivity of neutral fractional-delay systems.

PubMed

Xu, Qi; Shi, Min; Wang, Zaihua

2016-08-01

This paper generalizes the stability test method via integral estimation for integer-order neutral time-delay systems to neutral fractional-delay systems. The key step in stability test is the calculation of the number of unstable characteristic roots that is described by a definite integral over an interval from zero to a sufficient large upper limit. Algorithms for correctly estimating the upper limits of the integral are given in two concise ways, parameter dependent or independent. A special feature of the proposed method is that it judges the stability of fractional-delay systems simply by using rough integral estimation. Meanwhile, the paper shows that for some neutral fractional-delay systems, the stability is extremely sensitive to the change of time delays. Examples are given for demonstrating the proposed method as well as the delay sensitivity.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Ene, D.; Andersson, K.; Jensen, M.

The European Spallation Source (ESS) will produce tritium via spallation and activation processes during operational activities. Within the location of ESS facility in Lund, Sweden site it is mandatory to demonstrate that the management strategy of the produced tritium ensures the compliance with the country regulation criteria. The aim of this paper is to give an overview of the different aspects of the tritium management in ESS facility. Besides the design parameter study of the helium coolant purification system of the target the consequences of the tritium releasing into the environment were also analyzed. Calculations show that the annual releasemore » of tritium during the normal operations represents a small fraction from the estimated total dose. However, more refined calculations of migration of activated-groundwater should be performed for higher hydraulic conductivities, with the availability of the results on soil examinations. With the assumption of 100% release of tritium to the atmosphere during the occurring of the extreme accidents, it was found as well that the total dose complies with the constraint. (authors)« less

White-light coronal mass ejections: A new perspective from LASCO

NASA Technical Reports Server (NTRS)

St.Cyr, O. C.; Howard, R. A.; Simnett, G. M.; Gurman, J. B.; Plunkett, S. P.; Sheeley, N. R., Jr.; Schwenn, R.; Koomen, M. J.; Brueckner, G. E.; Michels, D. J.;

An Artificial-Gravity Space-Settlement Ground-Analogue Design Concept

NASA Technical Reports Server (NTRS)

Dorais, Gregory A.

2016-01-01

The design concept of a modular and extensible hypergravity facility is presented. Several benefits of this facility are described including that the facility is suitable as a full-scale artificial-gravity space-settlement ground analogue for humans, animals, and plants for indefinite durations. The design is applicable as an analogue for on-orbit settlements as well as those on moons, asteroids, and Mars. The design creates an extremely long-arm centrifuge using a multi-car hypergravity vehicle travelling on one or more concentric circular tracks. This design supports the simultaneous generation of multiple-gravity levels to explore the feasibility and value of and requirements for such space-settlement designs. The design synergizes a variety of existing technologies including centrifuges, tilting trains, roller coasters, and optionally magnetic levitation. The design can be incrementally implemented such that the facility can be operational for a small fraction of the cost and time required for a full implementation. Brief concept of operation examples are also presented.

Nucleosynthesis in Hypernovae Associated with Gamma-Ray Bursts

NASA Astrophysics Data System (ADS)

Nomoto, Ken'ichi

We present nucleosynthesis in very energetic hypernovae, whose kinetic energy (KE) is more than 10 times the KE of normal core-collapse supernovae (SNe). The light curve and spectra fitting of individual SN are used to estimate the mass of the progenitor, explosion energy, and produced 56Ni mass. Comparison with the abundance patterns of extremely metal-poor (EMP) stars has made it possible to determine the model parameters of core-collapse SNe. Nucleosynthesis in hypernovae is characterized by larger abundance ratios (Zn, Co, V, Ti)/Fe and smaller (Mn, Cr)/Fe than normal SNe, which can explain the observed trends of these ratios in EMP stars. Hypernovae are also jet-induced explosions, so that their nucleosynthesis yields can well reproduce the large C/Fe ratio observed in carbon-enhanced metal-poor (CEMP) stars if a small fraction of Fe-peak elements is mixed into the C-rich ejecta in the form of a jet while the bulk of Fe undergoes fallback from equatorial direction (faint supernovae/hypernovae).

OCTOCAM: A Workhorse Instrument for the Gemini Telescopes During the Era of LSST

NASA Astrophysics Data System (ADS)

Roming, Peter; van der Horst, Alexander; OCTOCAM Team

2018-01-01

The decade of the 2020s are planned to be an era of large surveys and giant telescopes. A trademark of this era will be the large number of interesting objects observed daily by high-cadence surveys, such as the LSST. Because of the sheer numbers, only a very small fraction of these interesting objects will be observed with extremely large telescopes. The follow up workhorses during this era will be the 8-meter class telescopes and corresponding instruments that are prepared to pursue these interesting objects. One such workhorse instrument is OCTOCAM, a highly efficient instrument designed to probe the time domain window with simulatenous broad-wavelength coverage. OCTOCAM optimizes the use of Gemini for broadband imaging and spectroscopic single-target observations. The instrument is designed for high temporal resolution, broad spectral coverage, and moderate spectral resolution. OCTOCAM was selected as part of the Gemini instrumentation program in early 2017. Here we provide a description of the science cases to be addressed, overall instrument design, and current status.

Precise Th/U-dating of small and heavily coated samples of deep sea corals

NASA Astrophysics Data System (ADS)

Lomitschka, Michael; Mangini, Augusto

1999-07-01

Marine carbonate skeletons like deep-sea corals are frequently coated with iron and manganese oxides/hydroxides which adsorb additional thorium and uranium out of the sea water. A new cleaning procedure has been developed to reduce this contamination. In this further cleaning step a solution of Na 2EDTA (Na 2H 2T B) and ascorbic acid is used which composition is optimised especially for samples of 20 mg of weight. It was first tested on aliquots of a reef-building coral which had been artificially contaminated with powdered ferromanganese nodule. Applied on heavily contaminated deep-sea corals (scleractinia), it reduced excess 230Th by another order of magnitude in addition to usual cleaning procedures. The measurement of at least three fractions of different contamination, together with an additional standard correction for contaminated carbonates results in Th/U-ages corrected for the authigenic component. A good agreement between Th/U- and 14C-ages can be achieved even for extremely coated corals.

Evaluation of extreme temperature events in northern Spain based on process control charts

NASA Astrophysics Data System (ADS)

Villeta, M.; Valencia, J. L.; Saá, A.; Tarquis, A. M.

2018-02-01

Extreme climate events have recently attracted the attention of a growing number of researchers because these events impose a large cost on agriculture and associated insurance planning. This study focuses on extreme temperature events and proposes a new method for their evaluation based on statistical process control tools, which are unusual in climate studies. A series of minimum and maximum daily temperatures for 12 geographical areas of a Spanish region between 1931 and 2009 were evaluated by applying statistical process control charts to statistically test whether evidence existed for an increase or a decrease of extreme temperature events. Specification limits were determined for each geographical area and used to define four types of extreme anomalies: lower and upper extremes for the minimum and maximum anomalies. A new binomial Markov extended process that considers the autocorrelation between extreme temperature events was generated for each geographical area and extreme anomaly type to establish the attribute control charts for the annual fraction of extreme days and to monitor the occurrence of annual extreme days. This method was used to assess the significance of changes and trends of extreme temperature events in the analysed region. The results demonstrate the effectiveness of an attribute control chart for evaluating extreme temperature events. For example, the evaluation of extreme maximum temperature events using the proposed statistical process control charts was consistent with the evidence of an increase in maximum temperatures during the last decades of the last century.

Food proteins and maturation of small intestinal microvillus membranes (MVM). II. Binding of gliadin hydrolysate fractions and of the gliadin peptide B3142.

PubMed

Stern, M; Gellermann, B; Belitz, H D; Wieser, H

1988-01-01

To investigate in vitro interactions between gliadin peptide fractions that have been shown to be toxic to celiac small intestinal mucosa in humans and small intestinal microvillus membranes (MVM) from rats during postnatal maturation, MVM were prepared from newborn, 18-day-old preweanling, and adult rats. Partially hydrolyzed gliadin peptide fractions B1-B4, and the pure gliadin peptide B3142 were radioiodinated and used for binding assays. Miniature ultracentrifugation was used for separation of unbound material. Binding of gliadin fractions to MVM was weak and nonspecific in terms of lacking saturation and inhibition. There was no inhibition of binding by mannan. Enzyme pretreatment of MVM (trypsin, neuraminidase, phospholipase C) did not result in any significant change of binding. Compared with peptides prepared from bovine serum albumin as a control, there was no significant difference in binding of gliadin peptide fractions to MVM. Thus, a lectin-like effect of gliadin peptides toward MVM, or the existence of a specific intestinal surface receptor for gliadin peptides appeared improbable. There were, however, consistent maturational changes in MVM binding in that newborn MVM bound more B1-B4 and B3142 compared with adult controls (p less than 0.001). Nonspecific binding of gliadin fractions to MVM might be related to the initiation of nonspecific in vitro effects of gliadin, particularly toward the immature small intestine. The MVM binding model in the rat clearly does not provide a system for studying celiac disease pathogenesis, but it might help clarify basic processes in the interaction between food-derived substances and elements of the gastrointestinal mucosal barrier.

Relationship between Icodextrin use and decreased level of small low-density lipoprotein cholesterol fractioned by high-performance gel permeation chromatography

PubMed Central

2013-01-01

Background Because of the absorption of glucose in peritoneal dialysis (PD) solution, PD patients show an atherogenic lipid profile, which is predictive of poor survival in PD patients. Lipoprotein subclasses consist of a continuous spectrum of particles of different sizes and densities (fraction). In this study, we investigated the lipoprotein fractions in PD patients with controlled serum low-density lipoprotein (LDL) cholesterol level, and evaluated the effects of icodextrin on lipid metabolism. Methods Forty-nine PD patients were enrolled in this cross-sectional study in Japan. The proportions of cholesterol levels to total cholesterol level (cholesterol proportion) in 20 lipoprotein fractions were measured using an improved method of high-performance gel permeation chromatography (HPGPC). Results Twenty-six patients used icodextrin. Although no significant differences in cholesterol levels in LDL and high-density lipoprotein (HDL) were observed between the patients using icodextrin (icodextrin group) and control groups, HPGPC showed that the icodextrin group had significantly lower cholesterol proportions in the small LDL (t-test, p=0.053) and very small LDL (p=0.019), and significantly higher cholesterol proportions in the very large HDL and large HDL than the control group (p=0.037; p=0.066, respectively). Multivariate analysis adjusted for patient characteristics and statin use showed that icodextrin use was negatively associated with the cholesterol proportions in the small LDL (p=0.037) and very small LDL (p=0.026), and positively with those in the very large HDL (p=0.040), large HDL (p=0.047), and medium HDL (p=0.009). Conclusions HPGPC showed the relationship between icodextrin use and the cholesterol proportions in lipoprotein fractions in PD patients. These results suggest that icodextrin may improve atherogenic lipid profiles in a manner different from statin. PMID:24161017

Composting in small laboratory pilots: performance and reproducibility.

PubMed

Lashermes, G; Barriuso, E; Le Villio-Poitrenaud, M; Houot, S

2012-02-01

Small-scale reactors (<10 l) have been employed in composting research, but few attempts have assessed the performance of composting considering the transformations of organic matter. Moreover, composting at small scales is often performed by imposing a fixed temperature, thus creating artificial conditions, and the reproducibility of composting has rarely been reported. The objectives of this study are to design an innovative small-scale composting device safeguarding self-heating to drive the composting process and to assess the performance and reproducibility of composting in small-scale pilots. The experimental setup included six 4-l reactors used for composting a mixture of sewage sludge and green wastes. The performance of the process was assessed by monitoring the temperature, O(2) consumption and CO(2) emissions, and characterising the biochemical evolution of organic matter. A good reproducibility was found for the six replicates with coefficients of variation for all parameters generally lower than 19%. An intense self-heating ensured the existence of a spontaneous thermophilic phase in all reactors. The average loss of total organic matter (TOM) was 46% of the initial content. Compared to the initial mixture, the hot water soluble fraction decreased by 62%, the hemicellulose-like fraction by 68%, the cellulose-like fraction by 50% and the lignin-like fractions by 12% in the final compost. The TOM losses, compost stabilisation and evolution of the biochemical fractions were similar to observed in large reactors or on-site experiments, excluding the lignin degradation, which was less important than in full-scale systems. The reproducibility of the process and the quality of the final compost make it possible to propose the use of this experimental device for research requiring a mass reduction of the initial composted waste mixtures. Copyright © 2011 Elsevier Ltd. All rights reserved.

Secondary Sulfate Mineralization and Basaltic Chemistry of Craters of the Moon National Monument, Idaho: Potential Martian Analog

DOE Office of Scientific and Technical Information (OSTI.GOV)

C. Doc Richardson; Nancy W. Hinman; Lindsay J. McHenry

2012-05-01

Secondary deposits associated with the basaltic caves of Craters of the Moon National Monument (COM) in southern Idaho were examined using X-ray powder diffraction, X-ray fluorescence spectrometry, Fourier transform infrared spectrometry, and Fourier transform ion cyclotron resonance mass spectrometry (FTICR-MS). The secondary mineral assemblages are dominated by Na-sulfate minerals (thenardite, mirabilite) with a small fraction of the deposits containing minor concentrations of Na-carbonate minerals. The assemblages are found as white, efflorescent deposits in small cavities along the cave walls and ceilings and as localized mounds on the cave floors. Formation of the deposits is likely due to direct and indirectmore » physiochemical leaching of meteoritic water through the overlying basalts. Whole rock data from the overlying basaltic flows are characterized by their extremely high iron concentrations, making them good analogs for martian basalts. Understanding the physiochemical pathways leading to secondary mineralization at COM is also important because lava tubes and basaltic caves are present on Mars. The ability of FTICR-MS to consistently and accurately identify mineral species within these heterogeneous mineral assemblages proves its validity as a valuable technique for the direct fingerprinting of mineral species by deductive reasoning or by comparison with reference spectra.« less

Revealing the structure of the world airline network

PubMed Central

Verma, T.; Araújo, N. A. M.; Herrmann, H. J.

2014-01-01

Resilience of most critical infrastructures against failure of elements that appear insignificant is usually taken for granted. The World Airline Network (WAN) is an infrastructure that reduces the geographical gap between societies, both small and large, and brings forth economic gains. With the extensive use of a publicly maintained data set that contains information about airports and alternative connections between these airports, we empirically reveal that the WAN is a redundant and resilient network for long distance air travel, but otherwise breaks down completely due to removal of short and apparently insignificant connections. These short range connections with moderate number of passengers and alternate flights are the connections that keep remote parts of the world accessible. It is surprising, insofar as there exists a highly resilient and strongly connected core consisting of a small fraction of airports (around 2.3%) together with an extremely fragile star-like periphery. Yet, in spite of their relevance, more than 90% of the world airports are still interconnected upon removal of this core. With standard and unconventional removal measures we compare both empirical and topological perceptions for the fragmentation of the world. We identify how the WAN is organized into different classes of clusters based on the physical proximity of airports and analyze the consequence of this fragmentation. PMID:25005934

Tiny Mimas, Huge Rings

NASA Image and Video Library

2016-11-28

Saturn's icy moon Mimas is dwarfed by the planet's enormous rings. Because Mimas (near lower left) appears tiny by comparison, it might seem that the rings would be far more massive, but this is not the case. Scientists think the rings are no more than a few times as massive as Mimas, or perhaps just a fraction of Mimas' mass. Cassini is expected to determine the mass of Saturn's rings to within just a few hundredths of Mimas' mass as the mission winds down by tracking radio signals from the spacecraft as it flies close to the rings. The rings, which are made of small, icy particles spread over a vast area, are extremely thin -- generally no thicker than the height of a house. Thus, despite their giant proportions, the rings contain a surprisingly small amount of material. Mimas is 246 miles (396 kilometers) wide. This view looks toward the sunlit side of the rings from about 6 degrees above the ring plane. The image was taken in red light with the Cassini spacecraft wide-angle camera on July 21, 2016. The view was obtained at a distance of approximately 564,000 miles (907,000 kilometers) from Saturn and at a Sun-Saturn-spacecraft, or phase, angle of 31 degrees. Image scale is 34 miles (54 kilometers) per pixel. http://photojournal.jpl.nasa.gov/catalog/PIA20509

Bias in fallout data from nuclear surface shot SMALL BOY: an evaluation of sample perturbation by sieve sizing. Technical report

DOE Office of Scientific and Technical Information (OSTI.GOV)

Pascual, J.N.

1967-06-26

Evaluation of sample bias introduced by the mechanical sieving of Small Boy fallout samples for 10 minutes revealed the following: Up to 20% of the mass and 30% of the gamma-ray activity can be lost from the large-particle (greater than 1400 microns) fraction. The pan fraction (less than 44 microns) can gain in weight by as much as 79%, and in activity by as much as 44%. The gamma-ray spectra of the fractions were not noticeably altered by the process. Examination of unbiased pan fractions (before mechanical sieving) indicated bimodality of the mass-size distribution in a sample collected 9,200 feetmore » from ground zero, but not in a sample collected at 13,300 feet.« less

On the upper ocean turbulent dissipation rate due to microscale breakers and small whitecaps

NASA Astrophysics Data System (ADS)

Banner, Michael L.; Morison, Russel P.

2018-06-01

In ocean wave modelling, accurately computing the evolution of the wind-wave spectrum depends on the source terms and the spectral bandwidth used. The wave dissipation rate source term which spectrally quantifies wave breaking and other dissipative processes remains poorly understood, including the spectral bandwidth needed to capture the essential model physics. The observational study of Sutherland and Melville (2015a) investigated the relative dissipation rate contributions of breaking waves, from large-scale whitecaps to microbreakers. They concluded that a large fraction of wave energy was dissipated by microbreakers. However, in strong contrast with their findings, our analysis of their data and other recent data sets shows that for young seas, microbreakers and small whitecaps contribute only a small fraction of the total breaking wave dissipation rate. For older seas, we find microbreakers and small whitecaps contribute a large fraction of the breaking wave dissipation rate, but this is only a small fraction of the total dissipation rate, which is now dominated by non-breaking contributions. Hence, for all the wave age conditions observed, microbreakers make an insignificant contribution to the total wave dissipation rate in the wave boundary layer. We tested the sensitivity of the results to the SM15a whitecap analysis methodology by transforming the SM15a breaking data using our breaking crest processing methodology. This resulted in the small-scale breaking waves making an even smaller contribution to the total wave dissipation rate, and so the result is independent of the breaker processing methodology. Comparison with other near-surface total TKE dissipation rate observations also support this conclusion. These contributions to the spectral dissipation rate in ocean wave models are small and need not be explicitly resolved.

A Test-Length Correction to the Estimation of Extreme Proficiency Levels

ERIC Educational Resources Information Center

Magis, David; Beland, Sebastien; Raiche, Gilles

2011-01-01

In this study, the estimation of extremely large or extremely small proficiency levels, given the item parameters of a logistic item response model, is investigated. On one hand, the estimation of proficiency levels by maximum likelihood (ML), despite being asymptotically unbiased, may yield infinite estimates. On the other hand, with an…

Particulate matter, its elemental carbon fraction, and very early preterm birth

EPA Science Inventory

Background: Particulate matter (PM) has been variably associated with preterm birth, with potentially increased vulnerability during weeks 20-27 of gestation (extremely preterm birth (EPTB)), but the role of PM components have been less studied. Objectives: To estimate associati...

Prevention through policy: Urban macroplastic leakages to the marine environment during extreme rainfall events.

PubMed

Axelsson, Charles; van Sebille, Erik

2017-11-15

The leakage of large plastic litter (macroplastics) into the ocean is a major environmental problem. A significant fraction of this leakage originates from coastal cities, particularly during extreme rainfall events. As coastal cities continue to grow, finding ways to reduce this macroplastic leakage is extremely pertinent. Here, we explore why and how coastal cities can reduce macroplastic leakages during extreme rainfall events. Using nine global cities as a basis, we establish that while cities actively create policies that reduce plastic leakages, more needs to be done. Nonetheless, these policies are economically, socially and environmentally cobeneficial to the city environment. While the lack of political engagement and economic concerns limit these policies, lacking social motivation and engagement is the largest limitation towards implementing policy. We recommend cities to incentivize citizen and municipal engagement with responsible usage of plastics, cleaning the environment and preparing for future extreme rainfall events. Copyright © 2017 The Author(s). Published by Elsevier Ltd.. All rights reserved.

Rare Event Simulation in Radiation Transport

NASA Astrophysics Data System (ADS)

Kollman, Craig

This dissertation studies methods for estimating extremely small probabilities by Monte Carlo simulation. Problems in radiation transport typically involve estimating very rare events or the expected value of a random variable which is with overwhelming probability equal to zero. These problems often have high dimensional state spaces and irregular geometries so that analytic solutions are not possible. Monte Carlo simulation must be used to estimate the radiation dosage being transported to a particular location. If the area is well shielded the probability of any one particular particle getting through is very small. Because of the large number of particles involved, even a tiny fraction penetrating the shield may represent an unacceptable level of radiation. It therefore becomes critical to be able to accurately estimate this extremely small probability. Importance sampling is a well known technique for improving the efficiency of rare event calculations. Here, a new set of probabilities is used in the simulation runs. The results are multiplied by the likelihood ratio between the true and simulated probabilities so as to keep our estimator unbiased. The variance of the resulting estimator is very sensitive to which new set of transition probabilities are chosen. It is shown that a zero variance estimator does exist, but that its computation requires exact knowledge of the solution. A simple random walk with an associated killing model for the scatter of neutrons is introduced. Large deviation results for optimal importance sampling in random walks are extended to the case where killing is present. An adaptive "learning" algorithm for implementing importance sampling is given for more general Markov chain models of neutron scatter. For finite state spaces this algorithm is shown to give, with probability one, a sequence of estimates converging exponentially fast to the true solution. In the final chapter, an attempt to generalize this algorithm to a continuous state space is made. This involves partitioning the space into a finite number of cells. There is a tradeoff between additional computation per iteration and variance reduction per iteration that arises in determining the optimal grid size. All versions of this algorithm can be thought of as a compromise between deterministic and Monte Carlo methods, capturing advantages of both techniques.

Cooperation in N-person evolutionary snowdrift game in scale-free Barabási Albert networks

NASA Astrophysics Data System (ADS)

Lee, K. H.; Chan, Chun-Him; Hui, P. M.; Zheng, Da-Fang

2008-09-01

Cooperation in the N-person evolutionary snowdrift game (NESG) is studied in scale-free Barabási-Albert (BA) networks. Due to the inhomogeneity of the network, two versions of NESG are proposed and studied. In a model where the size of the competing group varies from agent to agent, the fraction of cooperators drops as a function of the payoff parameter. The networking effect is studied via the fraction of cooperative agents for nodes with a particular degree. For small payoff parameters, it is found that the small- k agents are dominantly cooperators, while large- k agents are of non-cooperators. Studying the spatial correlation reveals that cooperative agents will avoid to be nearest neighbors and the correlation disappears beyond the next-nearest neighbors. The behavior can be explained in terms of the networking effect and payoffs. In another model with a fixed size of competing groups, the fraction of cooperators could show a non-monotonic behavior in the regime of small payoff parameters. This non-trivial behavior is found to be a combined effect of the many agents with the smallest degree in the BA network and the increasing fraction of cooperators among these agents with the payoff for small payoffs.

ELROI Extremely Low Resource Optical Identifier. A license plate for your satellite, and more.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Palmer, David

ELROI (Extremely Low Resource Optical Identifier) is a license plate for your satellite; a small tag that flashes an optical identification code that can be read by a small telescope on the ground. The final version of the tag will be the size of a thick postage stamp and fully autonomous: you can attach it to everything that goes into space, including small cubesats and inert debris like rocket stages, and it will keep blinking even after the satellite is shut down, reliably identifying the object from launch until re-entry.

Halophilic viruses with varying biochemical and biophysical properties are amenable to purification with asymmetrical flow field-flow fractionation.

PubMed

Eskelin, Katri; Lampi, Mirka; Meier, Florian; Moldenhauer, Evelin; Bamford, Dennis H; Oksanen, Hanna M

2017-11-01

Viruses come in various shapes and sizes, and a number of viruses originate from extremities, e.g. high salinity or elevated temperature. One challenge for studying extreme viruses is to find efficient purification conditions where viruses maintain their infectivity. Asymmetrical flow field-flow fractionation (AF4) is a gentle native chromatography-like technique for size-based separation. It does not have solid stationary phase and the mobile phase composition is readily adjustable according to the sample needs. Due to the high separation power of specimens up to 50 µm, AF4 is suitable for virus purification. Here, we applied AF4 for extremophilic viruses representing four morphotypes: lemon-shaped, tailed and tailless icosahedral, as well as pleomorphic enveloped. AF4 was applied to input samples of different purity: crude supernatants of infected cultures, polyethylene glycol-precipitated viruses and viruses purified by ultracentrifugation. All four virus morphotypes were successfully purified by AF4. AF4 purification of culture supernatants or polyethylene glycol-precipitated viruses yielded high recoveries, and the purities were comparable to those obtained by the multistep ultracentrifugation purification methods. In addition, we also demonstrate that AF4 is a rapid monitoring tool for virus production in slowly growing host cells living in extreme conditions.

Spatio-Temporal Changes In Non-Extreme Precipitation Variability Over North America

NASA Astrophysics Data System (ADS)

Roque, S.

2016-12-01

Precipitation variability encompasses attributes associated with the sequencing and duration of events of the full range of magnitudes. However, climate change studies have largely focused on extreme events. Using analyses of long-term weather station data we show that high frequency events, such as fraction of wet days in a year and average duration of wet and dry periods, are undergoing significant changes across North America. The median increase in fraction of wet days in a year indicates that in 2010, North America experienced an additional 11 days of precipitation compared to 1960 (when the median number of wet days was 96), and wet periods that were 0.14 days longer than those in 1960 (when the median was 1.78 days). Further, these changes in high-frequency precipitation are more prevalent and larger than those associated with extremes. Such trends also exist for events of a range of magnitudes. Results reveal the existence of localized clusters with opposing trends to that of broader geographic variation, which illustrates the role of microclimate and other drivers of trends. Such hitherto unknown patterns have the potential to significantly inform our characterization of the resilience and vulnerability of a broad range of ecosystems, and agricultural and socio-economic systems. They can also set new benchmarks for climate model assessments.

Rate-induced solubility and suppression of the first-order phase transition in olivine LiFePO4.

PubMed

Zhang, Xiaoyu; van Hulzen, Martijn; Singh, Deepak P; Brownrigg, Alex; Wright, Jonathan P; van Dijk, Niels H; Wagemaker, Marnix

2014-05-14

The impact of ultrahigh (dis)charge rates on the phase transition mechanism in LiFePO4 Li-ion electrodes is revealed by in situ synchrotron diffraction. At high rates the solubility limits in both phases increase dramatically, causing a fraction of the electrode to bypass the first-order phase transition. The small transforming fraction demonstrates that nucleation rates are consequently not limiting the transformation rate. In combination with the small fraction of the electrode that transforms at high rates, this indicates that higher performances may be achieved by further optimizing the ionic/electronic transport in LiFePO4 electrodes.

Regularised extreme learning machine with misclassification cost and rejection cost for gene expression data classification.

PubMed

Lu, Huijuan; Wei, Shasha; Zhou, Zili; Miao, Yanzi; Lu, Yi

2015-01-01

The main purpose of traditional classification algorithms on bioinformatics application is to acquire better classification accuracy. However, these algorithms cannot meet the requirement that minimises the average misclassification cost. In this paper, a new algorithm of cost-sensitive regularised extreme learning machine (CS-RELM) was proposed by using probability estimation and misclassification cost to reconstruct the classification results. By improving the classification accuracy of a group of small sample which higher misclassification cost, the new CS-RELM can minimise the classification cost. The 'rejection cost' was integrated into CS-RELM algorithm to further reduce the average misclassification cost. By using Colon Tumour dataset and SRBCT (Small Round Blue Cells Tumour) dataset, CS-RELM was compared with other cost-sensitive algorithms such as extreme learning machine (ELM), cost-sensitive extreme learning machine, regularised extreme learning machine, cost-sensitive support vector machine (SVM). The results of experiments show that CS-RELM with embedded rejection cost could reduce the average cost of misclassification and made more credible classification decision than others.

Isolation and structural characterization of lignin from cotton stalk treated in an ammonia hydrothermal system.

PubMed

Kang, Sumin; Xiao, Lingping; Meng, Lingyan; Zhang, Xueming; Sun, Runcang

2012-11-16

To investigate the potential for the utilization of cotton stalk, ammonia hydrothermal treatment was applied to fractionate the samples into aqueous ammonia-soluble and ammonia-insoluble portions. The ammonia-soluble portion was purified to yield lignin fractions. The lignin fractions obtained were characterized by wet chemistry (carbohydrate analysis) and spectroscopy methods (FT-IR, 13C and 1H-13C HSQC NMR spectroscopy) as well as gel permeation chromatography (GPC). The results showed that the cotton stalk lignin fractions were almost absent of neutral sugars (0.43%-1.29%) and had relatively low average molecular weights (1255-1746 g/mol). The lignin fractions belonged to typical G-S lignin, which was composed predominately of G-type units (59%) and noticeable amounts of S-type units (40%) together with a small amount of H-type units (~1%). Furthermore, the ammonia-extractable lignin fractions were mainly composed of β-0-4' inter-unit linkages (75.6%), and small quantities of β-β' (12.2%), together with lower amounts of β-5' carbon-carbon linkages (7.4%) and p-hydroxycinnamyl alcohol end groups.

Uranium isotope composition of a laterite profile during extreme weathering of basalt in Guangdong, South China

NASA Astrophysics Data System (ADS)

Huang, J.; Zhou, Z.; Gong, Y.; Lundstrom, C.; Huang, F.

2015-12-01

Rock weathering and soil formation in the critical zone are important for material cycle from the solid Earth to superficial system. Laterite is a major type of soil in South China forming at hot-humid climate, which has strong effect on the global uranium cycle. Uranium is closely related to the environmental redox condition because U is stable at U(Ⅳ) in anoxic condition and U(Ⅵ) as soluble uranyl ion (UO22+) under oxic circumstance. In order to understand the behavior of U isotopes during crust weathering, here we report uranium isotopic compositions of soil and base rock samples from a laterite profile originated from extreme weathering of basalt in Guangdong, South China. The uranium isotopic data were measured on a Nu Plasma MC-ICP-MS at the University of Illinois at Urbana-Champaign using the double spike method. The δ238U of BCR-1 is -0.29±0.03‰ (relative to the international standard CRM-112A), corresponding to a 238U/235U ratio of 137.911±0.004. Our result of BCR-1 agrees with previous analyses (e.g., -0.28‰ in Weyer et al. 2008) [1]. U contents of the laterite profile decrease from 1.9 ppm to 0.9 ppm with depth, and peak at 160 - 170 cm (2.3 ppm), much higher than the U content of base rocks (~0.5 ppm). In contrary, U/Th of laterites is lower than that of base rock (0.27) except the peak at the depth of 160-170 cm (0.38), indicating significant U loss during weathering. Notably, U isotope compositions of soils show a small variation from -0.38 to -0.28‰, consistent with the base rock within analytical error (0.05‰ to 0.08‰, 2sd). Such small variation can be explained by a "rind effect" (Wang et al., 2015) [2], by which U(Ⅳ) can be completely oxidized to U(VI) layer by layer during basalt weathering by dissolved oxygen. Therefore, our study indicates that U loss during basalt weathering at the hot-humid climate does not change U isotope composition of superficial water system. [1] Weyer S. et al. (2008) Natural fractionation of 238U/235U. GCA 72,345-359 [2] Wang X. et al. (2015) Isotope fractionation during oxidation of tetravalent uranium by dissolved oxygen. GCA 150, 160-170

Monitoring of DSP toxins in small-sized plankton fraction of seawater collected in Mutsu Bay, Japan, by ELISA method: relation with toxin contamination of scallop.

PubMed

Imai, Ichiro; Sugioka, Hikaru; Nishitani, Goh; Mitsuya, Tadashi; Hamano, Yonekazu

2003-01-01

Monitorings were conducted on DSP toxins in mid-gut gland of scallop (mouse assay), cell numbers of toxic dinoflagellate species of Dinophysis, and diarrhetic shellfish poisoning (DSP) toxins in small-sized (0.7-5 microm) plankton fraction of seawater collected from surface (0 m) and 20 m depth at a station in Mutsu Bay, Aomori Prefecture, Japan, in 2000. A specific enzyme-linked immunosorbent assay (ELISA) was employed for the analysis of DSP toxins in small-sized plankton fraction using a mouse monoclonal anti-okadaic acid antibody which recognizes okadaic acid, dinophysistoxin-1, and dinophysistoxin-3. DSP toxins were detected twice in the mid-gut gland of scallops at 1.1-2.3 MU (mouse units) g(-1) on 26 June and at 0.6-1.2 MU g(-1) on 3 July, respectively. Relatively high cell densities of D. fortii were observed on 26 June and 11 September, and may only contribute to the bivalve toxicity during late June to early July. D. acuminata did not appear to be responsible for the toxicity of scallops in Mutsu Bay in 2000. ELISA monitoring of small-sized plankton fraction in seawater could detect DSP toxins two weeks before the detection of the toxin in scallops, and could do so two weeks after the loss of the bivalve toxicity by mouse assay. On 17 July, toxic D. fortii was detected at only small number, <10 cells l(-1), but DSP toxins were detected by the ELISA assay, suggesting a presence of other toxic small-sized plankton in seawater. For the purpose of reducing negative impacts of DSP occurrences, monitorings have been carried out hitherto on DSP toxins of bivalve tissues by mouse assay and on cell densities of "toxic" species of Dinophysis. Here we propose a usefulness of ELISA monitoring of plankton toxicity, especially in small-sized fraction, which are possible foods of mixotrophic Dinophysis, as a practical tool for detecting and predicting DSPs in coastal areas of fisheries grounds of bivalve aquaculture.

Some interesting examples of binormal degeneracy and analysis using a contaminated binormal ROC model

NASA Astrophysics Data System (ADS)

Berbaum, Kevin S.; Dorfman, Donald D.

2001-06-01

Receiver operating characteristic (ROC) data with false positive fractions of zero are often difficult to fit with standard ROC methodology, and are sometimes discarded. Some extreme examples of such data were analyzed. A new ROC model is proposed that assumes that for a proportion of abnormalities, no signal information is captured and that those abnormalities have the same distribution as noise along the latent decision axis. Rating reports of fracture for single view ankle radiographs were also analyzed with the binormal ROC model and two proper ROC models. The conventional models gave ROC area close to one, implying a true positive fraction close to one. The data contained no such fractions. When all false positive fractions were zero, conventional ROC areas gave little or no hint of unmistakable differences in true positive fractions. In contrast, the new model can fit ROC data in which some or all of the ROC points have false positive fractions of zero and true positive fractions less than one without concluding perfect performance. These data challenge the validity and robustness of conventional ROC models, but the contaminated binormal model accounts for these data. This research has been published for a different audience.

Magnetic Resonance Imaging-Guided Adaptive Radiation Therapy: A "Game Changer" for Prostate Treatment?

PubMed

Pathmanathan, Angela U; van As, Nicholas J; Kerkmeijer, Linda G W; Christodouleas, John; Lawton, Colleen A F; Vesprini, Danny; van der Heide, Uulke A; Frank, Steven J; Nill, Simeon; Oelfke, Uwe; van Herk, Marcel; Li, X Allen; Mittauer, Kathryn; Ritter, Mark; Choudhury, Ananya; Tree, Alison C

2018-02-01

Radiation therapy to the prostate involves increasingly sophisticated delivery techniques and changing fractionation schedules. With a low estimated α/β ratio, a larger dose per fraction would be beneficial, with moderate fractionation schedules rapidly becoming a standard of care. The integration of a magnetic resonance imaging (MRI) scanner and linear accelerator allows for accurate soft tissue tracking with the capacity to replan for the anatomy of the day. Extreme hypofractionation schedules become a possibility using the potentially automated steps of autosegmentation, MRI-only workflow, and real-time adaptive planning. The present report reviews the steps involved in hypofractionated adaptive MRI-guided prostate radiation therapy and addresses the challenges for implementation. Copyright © 2017 The Authors. Published by Elsevier Inc. All rights reserved.

Using binary statistics in Taurus-Auriga to distinguish between brown dwarf formation processes

NASA Astrophysics Data System (ADS)

Marks, M.; Martín, E. L.; Béjar, V. J. S.; Lodieu, N.; Kroupa, P.; Manjavacas, E.; Thies, I.; Rebolo López, R.; Velasco, S.

2017-08-01

Context. One of the key questions of the star formation problem is whether brown dwarfs (BDs) form in the manner of stars directly from the gravitational collapse of a molecular cloud core (star-like) or whether BDs and some very low-mass stars (VLMSs) constitute a separate population that forms alongside stars comparable to the population of planets, for example through circumstellar disk (peripheral) fragmentation. Aims: For young stars in Taurus-Auriga the binary fraction has been shown to be large with little dependence on primary mass above ≈ 0.2 M⊙, while for BDs the binary fraction is < 10%. Here we investigate a case in which BDs in Taurus formed dominantly, but not exclusively, through peripheral fragmentation, which naturally results in small binary fractions. The decline of the binary frequency in the transition region between star-like formation and peripheral formation is modelled. Methods: We employed a dynamical population synthesis model in which stellar binary formation is universal with a large binary fraction close to unity. Peripheral objects form separately in circumstellar disks with a distinctive initial mass function (IMF), their own orbital parameter distributions for binaries, and small binary fractions, according to observations and expectations from smoothed particle hydrodynamics (SPH) and grid-based computations. A small amount of dynamical processing of the stellar component was accounted for as appropriate for the low-density Taurus-Auriga embedded clusters. Results: The binary fraction declines strongly in the transition region between star-like and peripheral formation, exhibiting characteristic features. The location of these features and the steepness of this trend depend on the mass limits for star-like and peripheral formation. Such a trend might be unique to low density regions, such as Taurus, which host binary populations that are largely unprocessed dynamically in which the binary fraction is large for stars down to M-dwarfs and small for BDs. Conclusions: The existence of a strong decline in the binary fraction - primary mass diagram will become verifiable in future surveys on BD and VLMS binarity in the Taurus-Auriga star-forming region. The binary fraction - primary mass diagram is a diagnostic of the (non-)continuity of star formation along the mass scale, the separateness of the stellar and BD populations, and the dominant formation channel for BDs and BD binaries in regions of low stellar density hosting dynamically unprocessed populations.

Fate of organic carbon from different waste materials in cropland soils

NASA Astrophysics Data System (ADS)

Paetsch, Lydia; Mueller, Carsten; Rumpel, Cornelia; Houot, Sabine; Kögel-Knabner, Ingrid

2015-04-01

Organic amendments are widely used to enhance the fertility of cropland soils. However, there is only scarce knowledge about the long term impact of added organic matter (OM) on the soil organic carbon (SOC) pool. Therefore, we analyzed a long-term field experiment in Feucherolles (France), which regularly received three different composts (home sorted bio-waste mixed with green waste (BIO), municipal solid waste (MSW) and a mixture of green waste and sewage sludge (GWS) and cattle manure since 1998. With these organic materials approximately 4 Mg total OC were added to the soil in two year intervals. The experiment was fully randomized with 4 replicates for each amendment. In September 2013 we took samples from the surface soil (0-5 cm of Ap horizon) of all 4 treatments and the unamended control. To study the chemical alteration and the fate of the added OC into different soil compartments, we fractionated the soils by physical means using a combined density and particle size protocol. Carbon and N content were determined in bulk soils, amendments as well as in size fractions (fPOM, oPOM <20µm and oPOM >20µm, sand, silt and a combined fine silt-clay fraction). Chemical composition was determined by solid-state 13C CPMAS NMR spectroscopy. We found significant higher C contents for the oPOM small and sand fraction of BIO treated soil and for the clay fraction of GWS treated soils (p<0.05). Nitrogen contents were significantly higher for BIO treated soils in bulk soil, fPOM, oPOM small and for GWS treated soils in bulk soil, fPOM and oPOM. The NMR measurements revealed that only the chemical composition of the fPOM differed according to the treatment; towards the more altered fractions as the oPOM small, the compositional differences leveled out and became almost homogeneous. Furthermore, the NMR measurements indicate a similar OC composition within the independent field replicates regarding the different amendments and fractions. As previously shown, N was found to be concentrated in the clay fractions, but interestingly we were able to show this also for the oPOM small. Proteins and peptides, as indicated by the broad resonance between 30 and 55 ppm, clearly point to the presence of microbial products and residues in this fraction.

Gravitational Waves From the Kerr/CFT Correspondence

NASA Astrophysics Data System (ADS)

Porfyriadis, Achilleas

Astronomical observation suggests the existence of near-extreme Kerr black holes in the sky. Properties of diffeomorphisms imply that dynamics of the near-horizon region of near-extreme Kerr are governed by an infinite-dimensional conformal symmetry. This symmetry may be exploited to analytically, rather than numerically, compute a variety of potentially observable processes. In this thesis we compute the gravitational radiation emitted by a small compact object that orbits in the near-horizon region and plunges into the horizon of a large rapidly rotating black hole. We study the holographically dual processes in the context of the Kerr/CFT correspondence and find our conformal field theory (CFT) computations in perfect agreement with the gravity results. We compute the radiation emitted by a particle on the innermost stable circular orbit (ISCO) of a rapidly spinning black hole. We confirm previous estimates of the overall scaling of the power radiated, but show that there are also small oscillations all the way to extremality. Furthermore, we reveal an intricate mode-by-mode structure in the flux to infinity, with only certain modes having the dominant scaling. The scaling of each mode is controlled by its conformal weight. Massive objects in adiabatic quasi-circular inspiral towards a near-extreme Kerr black hole quickly plunge into the horizon after passing the ISCO. The post-ISCO plunge trajectory is shown to be related by a conformal map to a circular orbit. Conformal symmetry of the near-horizon region is then used to compute analytically the gravitational radiation produced during the plunge phase. Most extreme-mass-ratio-inspirals of small compact objects into supermassive black holes end with a fast plunge from an eccentric last stable orbit. We use conformal transformations to analytically solve for the radiation emitted from various fast plunges into extreme and near-extreme Kerr black holes.

Compilation of 1986 annual reports of the Navy ELF (Extremely Low Frequency) communications system ecological monitoring program, volume 2

NASA Astrophysics Data System (ADS)

1987-07-01

The U.S. Navy is conducting a long-term program to monitor for possible effects from the operation of its Extremely Low Frequency (ELF) Communications System to resident biota and their ecological relationships. This report documents progress of the following studies: soil amoeba; soil and litter arthropoda and earthworm studies; biological studies on pollinating insects: megachilid bees; and small vertebrates: small mammals and nesting birds.

Polygenic determinants in extremes of high-density lipoprotein cholesterol[S

PubMed Central

Dron, Jacqueline S.; Wang, Jian; Low-Kam, Cécile; Khetarpal, Sumeet A.; Robinson, John F.; McIntyre, Adam D.; Ban, Matthew R.; Cao, Henian; Rhainds, David; Dubé, Marie-Pierre; Rader, Daniel J.; Lettre, Guillaume; Tardif, Jean-Claude

2017-01-01

HDL cholesterol (HDL-C) remains a superior biochemical predictor of CVD risk, but its genetic basis is incompletely defined. In patients with extreme HDL-C concentrations, we concurrently evaluated the contributions of multiple large- and small-effect genetic variants. In a discovery cohort of 255 unrelated lipid clinic patients with extreme HDL-C levels, we used a targeted next-generation sequencing panel to evaluate rare variants in known HDL metabolism genes, simultaneously with common variants bundled into a polygenic trait score. Two additional cohorts were used for validation and included 1,746 individuals from the Montréal Heart Institute Biobank and 1,048 individuals from the University of Pennsylvania. Findings were consistent between cohorts: we found rare heterozygous large-effect variants in 18.7% and 10.9% of low- and high-HDL-C patients, respectively. We also found common variant accumulation, indicated by extreme polygenic trait scores, in an additional 12.8% and 19.3% of overall cases of low- and high-HDL-C extremes, respectively. Thus, the genetic basis of extreme HDL-C concentrations encountered clinically is frequently polygenic, with contributions from both rare large-effect and common small-effect variants. Multiple types of genetic variants should be considered as contributing factors in patients with extreme dyslipidemia. PMID:28870971

Polygenic determinants in extremes of high-density lipoprotein cholesterol.

PubMed

Dron, Jacqueline S; Wang, Jian; Low-Kam, Cécile; Khetarpal, Sumeet A; Robinson, John F; McIntyre, Adam D; Ban, Matthew R; Cao, Henian; Rhainds, David; Dubé, Marie-Pierre; Rader, Daniel J; Lettre, Guillaume; Tardif, Jean-Claude; Hegele, Robert A

2017-11-01

HDL cholesterol (HDL-C) remains a superior biochemical predictor of CVD risk, but its genetic basis is incompletely defined. In patients with extreme HDL-C concentrations, we concurrently evaluated the contributions of multiple large- and small-effect genetic variants. In a discovery cohort of 255 unrelated lipid clinic patients with extreme HDL-C levels, we used a targeted next-generation sequencing panel to evaluate rare variants in known HDL metabolism genes, simultaneously with common variants bundled into a polygenic trait score. Two additional cohorts were used for validation and included 1,746 individuals from the Montréal Heart Institute Biobank and 1,048 individuals from the University of Pennsylvania. Findings were consistent between cohorts: we found rare heterozygous large-effect variants in 18.7% and 10.9% of low- and high-HDL-C patients, respectively. We also found common variant accumulation, indicated by extreme polygenic trait scores, in an additional 12.8% and 19.3% of overall cases of low- and high-HDL-C extremes, respectively. Thus, the genetic basis of extreme HDL-C concentrations encountered clinically is frequently polygenic, with contributions from both rare large-effect and common small-effect variants. Multiple types of genetic variants should be considered as contributing factors in patients with extreme dyslipidemia. Copyright © 2017 by the American Society for Biochemistry and Molecular Biology, Inc.

Beach ridge sedimentology: field observation and palaeoenvironmental interpretation for Anegada Island, British Virgin Islands.

NASA Astrophysics Data System (ADS)

Cescon, Anna Lisa; Cooper, J. Andrew G.; Jackson, Derek W. T.

2014-05-01

Beach ridge landforms have been observed in different environments and in settings that range from polar to tropical. Their stratigraphy and sedimentology has received a limited amount of discussion in the literature (Tamura, 2012). In coastal geomorphology a beach ridge can be seen as a transitional deposit between onshore and offshore environments. They are regarded as representing high level wave action along a coastline. In the Caribbean the origin of beach ridges has been variously attributed to one of three extreme wave events: extreme swell, extreme storm or tsunami waves. Beach ridges are arranged in beach ridge plains where there is succession of the landforms and can be several kilometres long. Beach ridge accumulation is not continuous and the coast shows alternating accretion and erosion periods. The use of beach ridges as palaeostorm archives is therefore not straightforward. The temporal continuity of beach ridge formation is being assessed on the beach ridge plains of Anegada, British Virgin Islands (Lesser Antilles). This carbonate platform surrounded by a fringing reef contains two beach ridge plains. There are more than 30 ridges in the Atlantic facing- coast and around 10 in the south, Caribbean- facing coast. The sediments of the modern beaches are dominated by the sand fraction and are 100% biogenic origin due to the isolation of Anegada from terrestrial sediment sources. The beach ridge sections have been studied in different area of Anegada beach ridge plains and present low angle seaward-dipping bedding. The sand fraction is dominant in the stratigraphy with a few intact shells. At only one site were coral pebbles deposited in association with the sand fraction. Aeolian deposits represent the upper part of the beach ridges and reflect the stabilization of the beach ridges with ongoing accretion. The sedimentology of the contemporary beach and dunes will be discussed in terms of their implications for understanding beach ridge genesis and its relationship to extreme wave events. Tamura, T., 2012. Beach ridges and prograded beach deposits as palaeoenvironment records. Earth-Science Reviews, 114, pp. 279-297.

Transmembrane molecular transport during versus after extremely large, nanosecond electric pulses.

PubMed

Smith, Kyle C; Weaver, James C

2011-08-19

Recently there has been intense and growing interest in the non-thermal biological effects of nanosecond electric pulses, particularly apoptosis induction. These effects have been hypothesized to result from the widespread creation of small, lipidic pores in the plasma and organelle membranes of cells (supra-electroporation) and, more specifically, ionic and molecular transport through these pores. Here we show that transport occurs overwhelmingly after pulsing. First, we show that the electrical drift distance for typical charged solutes during nanosecond pulses (up to 100 ns), even those with very large magnitudes (up to 10 MV/m), ranges from only a fraction of the membrane thickness (5 nm) to several membrane thicknesses. This is much smaller than the diameter of a typical cell (∼16 μm), which implies that molecular drift transport during nanosecond pulses is necessarily minimal. This implication is not dependent on assumptions about pore density or the molecular flux through pores. Second, we show that molecular transport resulting from post-pulse diffusion through minimum-size pores is orders of magnitude larger than electrical drift-driven transport during nanosecond pulses. While field-assisted charge entry and the magnitude of flux favor transport during nanosecond pulses, these effects are too small to overcome the orders of magnitude more time available for post-pulse transport. Therefore, the basic conclusion that essentially all transmembrane molecular transport occurs post-pulse holds across the plausible range of relevant parameters. Our analysis shows that a primary direct consequence of nanosecond electric pulses is the creation (or maintenance) of large populations of small pores in cell membranes that govern post-pulse transmembrane transport of small ions and molecules. Copyright © 2011 Elsevier Inc. All rights reserved.

Transmembrane molecular transport during versus after extremely large, nanosecond electric pulses

PubMed Central

Smith, Kyle C.; Weaver, James C.

2012-01-01

Recently there has been intense and growing interest in the non-thermal biological effects of nanosecond electric pulses, particularly apoptosis induction. These effects have been hypothesized to result from the widespread creation of small, lipidic pores in the plasma and organelle membranes of cells (supra-electroporation) and, more specifically, ionic and molecular transport through these pores. Here we show that transport occurs overwhelmingly after pulsing. First, we show that the electrical drift distance for typical charged solutes during nanosecond pulses (up to 100 ns), even those with very large magnitudes (up to 10 MV/m), ranges from only a fraction of the membrane thickness (5 nm) to several membrane thicknesses. This is much smaller than the diameter of a typical cell (~16 μm), which implies that molecular drift transport during nanosecond pulses is necessarily minimal. This implication is not dependent on assumptions about pore density or the molecular flux through pores. Second, we show that molecular transport resulting from post-pulse diffusion through minimum-size pores is orders of magnitude larger than electrical drift-driven transport during nanosecond pulses. While field-assisted charge entry and the magnitude of flux favor transport during nanosecond pulses, these effects are too small to overcome the orders of magnitude more time available for post-pulse transport. Therefore, the basic conclusion that essentially all transmembrane molecular transport occurs post-pulse holds across the plausible range of relevant parameters. Our analysis shows that a primary direct consequence of nanosecond electric pulses is the creation (or maintenance) of large populations of small pores in cell membranes that govern post-pulse transmembrane transport of small ions and molecules. PMID:21756883

Estimates of the organic aerosol volatility in a boreal forest using two independent methods

NASA Astrophysics Data System (ADS)

Hong, Juan; Äijälä, Mikko; Häme, Silja A. K.; Hao, Liqing; Duplissy, Jonathan; Heikkinen, Liine M.; Nie, Wei; Mikkilä, Jyri; Kulmala, Markku; Prisle, Nønne L.; Virtanen, Annele; Ehn, Mikael; Paasonen, Pauli; Worsnop, Douglas R.; Riipinen, Ilona; Petäjä, Tuukka; Kerminen, Veli-Matti

2017-03-01

The volatility distribution of secondary organic aerosols that formed and had undergone aging - i.e., the particle mass fractions of semi-volatile, low-volatility and extremely low volatility organic compounds in the particle phase - was characterized in a boreal forest environment of Hyytiälä, southern Finland. This was done by interpreting field measurements using a volatility tandem differential mobility analyzer (VTDMA) with a kinetic evaporation model. The field measurements were performed during April and May 2014. On average, 40 % of the organics in particles were semi-volatile, 34 % were low-volatility organics and 26 % were extremely low volatility organics. The model was, however, very sensitive to the vaporization enthalpies assumed for the organics (ΔHVAP). The best agreement between the observed and modeled temperature dependence of the evaporation was obtained when effective vaporization enthalpy values of 80 kJ mol-1 were assumed. There are several potential reasons for the low effective enthalpy value, including molecular decomposition or dissociation that might occur in the particle phase upon heating, mixture effects and compound-dependent uncertainties in the mass accommodation coefficient. In addition to the VTDMA-based analysis, semi-volatile and low-volatility organic mass fractions were independently determined by applying positive matrix factorization (PMF) to high-resolution aerosol mass spectrometer (HR-AMS) data. The factor separation was based on the oxygenation levels of organics, specifically the relative abundance of mass ions at m/z 43 (f43) and m/z 44 (f44). The mass fractions of these two organic groups were compared against the VTDMA-based results. In general, the best agreement between the VTDMA results and the PMF-derived mass fractions of organics was obtained when ΔHVAP = 80 kJ mol-1 was set for all organic groups in the model, with a linear correlation coefficient of around 0.4. However, this still indicates that only about 16 % (R2) of the variation can be explained by the linear regression between the results from these two methods. The prospect of determining of extremely low volatility organic aerosols (ELVOAs) from AMS data using the PMF analysis should be assessed in future studies.

Polycyclic aromatic hydrocarbons are enriched but bioaccessibility reduced in brownfield soils adhered to human hands.

PubMed

Siciliano, Steven D; Laird, B D; Lemieux, C L

2010-08-01

The health risk associated with exposure to urban brownfields is often driven by the incidental ingestion of soil by humans. Recent evidence found that humans likely ingest the fraction of soil that passes a 45-microm sieve, which is the particle size adhered to the hands. We evaluated if PAH concentrations were enriched in this soil fraction compared to the bulk soil and if this enrichment lead to an increase in bioaccessibility and thus an increase in incremental lifetime cancer risk for exposed persons. Soils (n=18) with PAH concentrations below the current Canadian soil quality guidelines for human health were collected from an Arctic urban site and were sieved to pass a 45-microm sieve. Soil PAH profiles were measured and bioaccessibility was assessed using the Simulator of the Human Intestinal Microbial Ecosystem (SHIME). PAHs were significantly enriched in the <45 microm size fraction (3.7-fold) and this enrichment could be predicted according to the fugacity capacity of soil (Enrichment=2.18-0.055Zsoil, r2=0.65, p<0.001). PAH release in the stomach and small intestine compartments of the SHIME was low (8%) and could not be predicted by PAH concentrations in 45-microm sieved soil. In fact, PAH release in the SHIME was lower from the <45 microm size fraction despite the fact that this fraction had higher levels of PAHs than the bulk soil. We postulate that this occurs because PAHs adsorbed to soil did not reach equilibrium with the small intestinal fluid. In contrast, PAH release in the colonic compartment of the SHIME reached equilibrium and was linked to soil concentration. Bioaccessibility in the SHIME colon could be predicted by the ratio of fugacity capacity of soil to water for a PAH (Bioaccessibility=0.15e(-6.4x10E-7Zsoil/Zwater), r2=0.53, p<0.01). The estimated incremental lifetime cancer risk was significantly greater for the <45 microm soil fraction compared to the bulk fraction; however, when bioaccessible PAH concentrations in a simulated small intestine were used in the risk assessment calculations, cancer risk was slightly lower in the <45 microm soil fraction for these soils. Our results highlight the importance of using a small soil size fraction, e.g. 45 microm, for contaminated site human health risk assessment. However, further work is needed to estimate the bioavailability of this size fraction in an in vivo model and to assess the correlation between in vitro and in vivo gastrointestinal models. Copyright (c) 2010 Elsevier Ltd. All rights reserved.

Copper isotope behavior during extreme magma differentiation and degassing: a case study on Laacher See phonolite tephra (East Eifel, Germany)

NASA Astrophysics Data System (ADS)

Huang, Jian; Liu, Sheng-Ao; Wörner, Gerhard; Yu, Huimin; Xiao, Yilin

2016-09-01

Copper (Cu) isotopic analyses were performed on a set of samples from the Laacher See tephra (LST) (Eifel, Germany) to investigate whether Cu isotopes are fractionated during extreme magma differentiation and degassing. The LST represents a continuous fractional crystallization series from parental basanite through mafic to highly differentiated phonolites. Samples analyzed here include phonolites of variable degrees of differentiation, phonolite-basanite hybrid rocks formed by mixing basanite and phonolite magmas, and basanite-derived mega-crystals (i.e., clinopyroxene, amphibole, phlogopite). In addition, we analyzed a series of mafic parental lavas from surrounding volcanic centers to constrain the Cu isotopic features of the Eifel mantle. Mafic phonolites show strong depletion in Cu compared to their parental basanites from ~50 to ~3 ppm, indicating sulfide fractionation during the basanite-to-phonolite differentiation. Mass balance calculations, based on the most Cu-rich hybrid rock (δ65Cu = -0.21 ‰, [Cu] = 46.2 ppm), show that the parental basanite magmas have δ65Cu of ca. -0.21 ‰, lighter than those of the mafic phonolites (~0.11 ‰). This suggests that sulfide fractionation preferentially removes the lighter Cu isotope (63Cu) in S-saturated magmas. By contrast, all phonolites have a limited range of Cu contents (1.1 to 4.0 ppm) with no systematic variations with S, suggesting that Cu is not controlled by sulfide fractionation during the evolution of mafic to highly differentiated phonolites. The identical δ65Cu values (0.11 ± 0.03 ‰, 2SD, n = 10) of the phonolites, irrespective of highly diverse composition and extents of differentiation, indicate that fractional crystallization of silicates (e.g., plagioclase, sanidine, amphibole, pyroxene, olivine), Fe-Ti-oxides and phosphate (e.g., apatite) generates insignificant Cu isotope fractionation. The lack of correlations between δ65Cu and volatile contents (e.g., S, Cl) in the LST sequence implies that volcanic degassing causes no detectable Cu isotope fractionation of igneous rocks. Eifel basalts and mega-crystals have variable δ65Cu (-0.18 to 0.21 ‰) that are uncorrelated to MgO and Cu, suggesting that such variations were not caused by differentiation but reflect the Cu isotopic heterogeneity of the Eifel mantle source due to metasomatism by fluids derived from hydrothermally altered oceanic lithosphere.

A Phase I Study of Chemoradiotherapy With Use of Involved-Field Conformal Radiotherapy and Accelerated Hyperfractionation for Stage III Non-Small Cell Lung Cancer: WJTOG 3305

DOE Office of Scientific and Technical Information (OSTI.GOV)

Tada, Takuhito, E-mail: tada@msic.med.osaka-cu.ac.jp; Department of Radiology, Izumi Municipal Hospital, Izumi; Chiba, Yasutaka

2012-05-01

Purpose: A Phase I study to determine a recommended dose of thoracic radiotherapy using accelerated hyperfractionation for unresectable non-small-cell lung cancer was conducted. Methods and Materials: Patients with unresectable Stage III non-small-cell lung cancer were treated intravenously with carboplatin (area under the concentration curve 2) and paclitaxel (40 mg/m{sup 2}) on Days 1, 8, 15, and 22 with concurrent twice-daily thoracic radiotherapy (1.5 Gy per fraction) beginning on Day 1 followed by two cycles of consolidation chemotherapy using carboplatin (area under the concentration curve 5) and paclitaxel (200 mg/m{sup 2}). Total doses were 54 Gy in 36 fractions, 60 Gymore » in 40 fractions, 66 Gy in 44 fractions, and 72 Gy in 48 fractions at Levels 1 to 4. The dose-limiting toxicity, defined as Grade {>=}4 esophagitis and neutropenic fever and Grade {>=}3 other nonhematologic toxicities, was monitored for 90 days. Results: Of 26 patients enrolled, 22 patients were assessable for response and toxicity. When 4 patients entered Level 4, enrollment was closed to avoid severe late toxicities. Dose-limiting toxicities occurred in 3 patients. They were Grade 3 neuropathy at Level 1 and Level 3 and Grade 3 infection at Level 1. However, the maximum tolerated dose was not reached. The median survival time was 28.6 months for all patients. Conclusions: The maximum tolerated dose was not reached, although the dose of radiation was escalated to 72 Gy in 48 fractions. However, a dose of 66 Gy in 44 fractions was adopted for this study because late toxicity data were insufficient.« less

Proteoform-specific protein binding of small molecules in complex matrices

USDA-ARS?s Scientific Manuscript database

Characterizing the specific binding between protein targets and small molecules is critically important for drug discovery. Conventional assays require isolation and purification of small molecules from complex matrices through multistep chromatographic fractionation, which may alter their original ...

The Thermal Pressure in Low Metallicity Galaxies

NASA Astrophysics Data System (ADS)

Wolfire, Mark; McKee, Christopher; Ostriker, Eve C.; Bolatto, Alberto; Jenkins, Edward

2015-08-01

The thermal pressure in the diffuse interstellar medium (ISM) is a relatively small fraction of the total ISM pressure yet it is extremely important for the evolution of the ISM phases. A multi-phase medium can exist between a range of thermal pressures Pmin < Pth < Pmax. The phase separation is driven by thermal instability and produces a cold (T ˜ 100 K) neutral atomic gas and a warm (T ˜ 8000 K) neutral atomic gas separated by thermally unstable gas. At thermal pressures greater than Pmax only the cold phase can exist and at thermal pressures less than Pmin only the warm phase can exist. The ISM is also highly turbulent and turbulence can both initiate the thermal phase transition and be produced in a rapid phase transition. Hydrodynamic modeling also points to a strong two-phase distribution (.e.g., Kim et al. 2011; Audit & Hennebelle 2010) with a median thermal pressure in the cold gas very near the expected two-phase pressure. Global, theoretical models including star-formation feedback have been developed for the molecular fraction in galactic disks using, at their core, the paradigm that thermal pressure determines the phase transitions to warm, cold, or multiphase medium (e.g., Krumholz et al. 2009; Ostriker et al. 2010).Here we present a phase diagram for a low metallicity galaxy using the Small Magellanic Clouds as an example. We find that although the heating rates and metallicities can differ by factors of 5 to 10 from the Milky Way, the resulting two-phase pressure and physical conditions of the phases are not very different from Galactic. We also confirm that a widely used fitting function for Pmin presented in Wolfire et al. 2003 provides an accurate prediction for the new results. We demonstrate how the variation in input parameters determine the final pressures and physical conditions.

Statistical mechanics of two-dimensional shuffled foams: Geometry-topology correlation in small or large disorder limits

NASA Astrophysics Data System (ADS)

Durand, Marc; Kraynik, Andrew M.; van Swol, Frank; Käfer, Jos; Quilliet, Catherine; Cox, Simon; Ataei Talebi, Shirin; Graner, François

2014-06-01

Bubble monolayers are model systems for experiments and simulations of two-dimensional packing problems of deformable objects. We explore the relation between the distributions of the number of bubble sides (topology) and the bubble areas (geometry) in the low liquid fraction limit. We use a statistical model [M. Durand, Europhys. Lett. 90, 60002 (2010), 10.1209/0295-5075/90/60002] which takes into account Plateau laws. We predict the correlation between geometrical disorder (bubble size dispersity) and topological disorder (width of bubble side number distribution) over an extended range of bubble size dispersities. Extensive data sets arising from shuffled foam experiments, surface evolver simulations, and cellular Potts model simulations all collapse surprisingly well and coincide with the model predictions, even at extremely high size dispersity. At moderate size dispersity, we recover our earlier approximate predictions [M. Durand, J. Kafer, C. Quilliet, S. Cox, S. A. Talebi, and F. Graner, Phys. Rev. Lett. 107, 168304 (2011), 10.1103/PhysRevLett.107.168304]. At extremely low dispersity, when approaching the perfectly regular honeycomb pattern, we study how both geometrical and topological disorders vanish. We identify a crystallization mechanism and explore it quantitatively in the case of bidisperse foams. Due to the deformability of the bubbles, foams can crystallize over a larger range of size dispersities than hard disks. The model predicts that the crystallization transition occurs when the ratio of largest to smallest bubble radii is 1.4.

Cosmic Extremes: Probing Energetic Transients with Radio Observations

NASA Astrophysics Data System (ADS)

Denham Alexander, Kate

2018-01-01

With the advent of sensitive facilities like the Karl G. Jansky Very Large Array (VLA) and planning well underway for vastly more powerful wide-field interferometers like the Square Kilometer Array, the study of radio astrophysical transients is poised for dramatic growth. Radio observations provide a unique window into a wide variety of transient events, from gamma-ray bursts (GRBs) to supernovae to tidal disruption events (TDEs) in which a star is torn apart by a supermassive black hole. In particular, GRBs and TDEs have emerged as valuable probes of some of the most extreme physics in the Universe. In these high-energy laboratories, the longer timescale of radio emission allows for extensive followup and characterization of the event energies and the densities of surrounding material. I will present high-cadence broadband radio studies of GRB afterglows and TDEs undertaken with the goal of learning more about their physical properties, the physics underlying the formation and growth of relativistic jets and outflows, and the environments in which these events occur. Our observations confirm that only a small fraction of TDEs produce relativistic jets but reveal low-luminosity, non-relativistic outflows in two nearby TDEs, allowing us to begin constraining the bulk of the TDE population. Our GRB radio observations reveal both intrinsic variability (reverse shocks) and extrinsic variability (interstellar scintillation). The insights derived from these studies will be invaluable for designing and interpreting the results from future radio transient surveys.

Characterization of outer membranes isolated from Treponema pallidum, the syphilis spirochete.

PubMed

Radolf, J D; Robinson, E J; Bourell, K W; Akins, D R; Porcella, S F; Weigel, L M; Jones, J D; Norgard, M V

1995-11-01

Previous freeze-fracture electron microscopy (EM) studies have shown that the outer membrane (OM) of Treponema pallidum contains sparse transmembrane proteins. One strategy for molecular characterization of these rare OM proteins involves isolation of T. pallidum OMs. Here we describe a simple and extremely gentle method for OM isolation based upon isopycnic sucrose density gradient ultracentrifugation of treponemes following plasmolysis in 20% sucrose. Evidence that T. pallidum OMs were isolated included (i) the extremely low protein/lipid ratio of the putative OM fraction, (ii) a paucity of antigenic and/or biochemical markers for periplasmic, cytoplasmic membrane, and cytosolic compartments, and (iii) freeze-fracture EM demonstrating that the putative OMs contained intramembranous particles highly similar in size and density to those in native T. pallidum OMs. Sodium dodecyl sulfate-polyacrylamide gel electrophoresis analysis revealed that the OMs contained a relatively small number of treponemal proteins, including several which did not appear to correspond to previously characterized T. pallidum antigens. Interestingly, these candidate rare OM proteins reacted poorly with syphilitic sera as determined by both conventional immunoblotting and enhanced chemiluminescence. Compared with whole cells, T. pallidum OMs were deficient in cardiolipin, the major lipoidal antigen reactive with antibodies in syphilitic sera. Also noteworthy was that other lipoidal constituents of OMs, including the recently discovered glycolipids, did not react with human syphilitic sera. These latter observations suggest that the poor antigenicity of virulent T. pallidum is a function of both the lipid composition and the low protein content of its OM.

Fractional quantum Hall effect in strained graphene: Stability of Laughlin states in disordered pseudomagnetic fields

NASA Astrophysics Data System (ADS)

Bagrov, Andrey A.; Principi, Alessandro; Katsnelson, Mikhail I.

2017-03-01

We address the question of the stability of the fractional quantum Hall effect in the presence of pseudomagnetic disorder generated by mechanical deformations of a graphene sheet. Neglecting the potential disorder and taking into account only strain-induced random pseudomagnetic fields, it is possible to write down a Laughlin-like trial ground-state wave function explicitly. Exploiting the Laughlin plasma analogy, we demonstrate that in the case of fluctuating pseudomagnetic fluxes of a relatively small amplitude, the fractional quantum Hall effect is always stable upon the deformations. By contrast, in the case of bubble-induced pseudomagnetic fields in graphene on a substrate (a small number of large fluxes) the disorder can be strong enough to cause a glass transition in the corresponding classical Coulomb plasma, resulting in the destruction of the fractional quantum Hall regime and in a quantum phase transition to a nonergodic state of the lowest Landau level.

Compilation of 1986 annual reports of the Navy ELF (extremely low frequency) communications system ecological-monitoring program. Volume 2. Tabs D-G. Annual progress report, January-December 1986

DOE Office of Scientific and Technical Information (OSTI.GOV)

Not Available

1987-07-01

The U.S. Navy is conducting a long-term program to monitor for possible effects from the operation of its Extremely Low Frequency (ELF) Communications System to resident biota and their ecological relationships. This report documents progress of the following studies: Soil Amoeba; Soil and Litter Arthropoda and Earthworm Studies; Biological Studies on Pollinating insects: Megachilid Bees; and Small Vertebrates: Small Mammals and Nesting Birds.

The jammed-to-mobile transition in frozen sand under stress

NASA Astrophysics Data System (ADS)

Durham, W. B.; Pathare, A.; Stern, L. A.; Lenferink, H. J.

2009-12-01

We conducted laboratory deformation experiments on sand-rich mixtures of sand + ice under sufficient confinement to inhibit macroscopic dilation. Dry sand packs constrained not to dilate when they are under a shearing load reach an immobile or “jammed” state, as load-supporting “force chains” of sand particles form after a small amount of strain and cannot be broken without volume expansion. Our research objective here was to find the minimum volume fraction of ice required to overcome the jammed state. The result surprised us: the required volume fraction is not a fixed number, but depends on the packing characteristics of the sand in question. Experiments were carried out in a triaxial gas deformation rig at confining pressures (60 - 200 MPa) always at least twice the level of differential stresses (11 - 50 MPa) in order to suppress dilatancy. Run temperatures were 223 - 243 K. We used two kinds of quartz sand, one well-sorted, with a maximum dry packing density (MDPD) of about 0.68 sand by volume, and the other a mixture of two sizes, having a higher MDPD of 0.75. Ice volume fraction ranged from well below saturation (where unfilled porosity necessarily remained) to slightly greater than the value of porosity at MDPD. We tested these frozen sands in compression under constant applied differential stress (creep). Strain rates were very low at these conditions, and runs took days or weeks to complete. The amount of strain required to reach the jammed state in ice-undersaturated samples was approximately 0.04, and did not show an obvious dependence on ice content. For both sands, the onset of mobility occurred at approximately 5% above the value of pore volume at MDPD. Furthermore, viscosity of mobile frozen sand near the transition point was extremely sensitive to ice fraction, which implies that at geologic strain rates, far slower than we can reach in the lab, the ice fraction at transition may lie closer to that at MDPD. Cryogenic scanning electron microscopy shows that fracturing of sand grains occurs in ice-undersaturated samples, but gradually disappears as saturation is reached. There are no fractured sand grains in deforming mobile frozen sand packs. One application of this work is to the regolith of Mars at mid-latitudes and poleward, where significant ice is expected to be present. Partially relaxed (“softened”) landforms such as craters require the presence of ice, but also suggest strengths far higher than that of ice. The extreme sensitivity of viscosity to ice content near the mobility boundary, and the near coincidence of mobility and saturation at MDPD together suggest a plausible explanation for partial landform softening on Mars that does not require a fortuitous ice content or an unrealistically brief period of saturation; namely, that the water content of the Martian regolith lies at or near saturation. If true, we can estimate the historical water content of the Martian regolith for reasonable soil densities as being between 120 and 240 global meters of water for the upper kilometer of crust. This is somewhat lower than previous estimates.

Does a Heavy Fe-Isotope Composition of Akilia Quartz-Amphibole-Pyroxene Rocks Necessitate a BIF Origin?

PubMed

Whitehouse, M J; Schoenberg, R; Fedo, C M; Kamber, B S

2015-10-01

The age and origin of the quartz-amphibole-pyroxene (qap) gneiss from the island of Akilia, southern West Greenland, have been the subject of intense debate since the light C-isotope composition of graphite inclusions in apatite was interpreted to indicate the presence of Earth's earliest biological activity. Although this claim for biogenic relicts has been vigorously challenged, the possibility that the rocks might represent some of Earth's earliest water-lain sediments and, hence, a suitable repository for life remains an open question. While some workers have suggested that the entire sequence represents an originally mafic-ultramafic igneous precursor subsequently modified by metasomatism, quartz injection, high-grade metamorphism, and extreme ductile deformation, others maintain that at least a small part of the sequence retains geochemical characteristics indicative of a chemical sedimentary origin. Fractionated Fe isotopes with δ(56)Fe values similar to those observed in Isua BIF have been reported from high-SiO2 units of qap and used to support a chemical sedimentary protolith for the qap unit. Here, we present new Fe isotope data from all lithologic variants in the qap gneiss on Akilia, including layers of undisputed ultramafic igneous origin. Since the latter require introduction of fractionated Fe into at least part of the qap unit, we argue that Fe isotopes must therefore be treated with considerable caution when used to infer BIF for part or all of the qap protolith.

The effect of defect cluster size and interpolation on radiographic image quality

NASA Astrophysics Data System (ADS)

Töpfer, Karin; Yip, Kwok L.

2011-03-01

For digital X-ray detectors, the need to control factory yield and cost invariably leads to the presence of some defective pixels. Recently, a standard procedure was developed to identify such pixels for industrial applications. However, no quality standards exist in medical or industrial imaging regarding the maximum allowable number and size of detector defects. While the answer may be application specific, the minimum requirement for any defect specification is that the diagnostic quality of the images be maintained. A more stringent criterion is to keep any changes in the images due to defects below the visual threshold. Two highly sensitive image simulation and evaluation methods were employed to specify the fraction of allowable defects as a function of defect cluster size in general radiography. First, the most critical situation of the defect being located in the center of the disease feature was explored using image simulation tools and a previously verified human observer model, incorporating a channelized Hotelling observer. Detectability index d' was obtained as a function of defect cluster size for three different disease features on clinical lung and extremity backgrounds. Second, four concentrations of defects of four different sizes were added to clinical images with subtle disease features and then interpolated. Twenty observers evaluated the images against the original on a single display using a 2-AFC method, which was highly sensitive to small changes in image detail. Based on a 50% just-noticeable difference, the fraction of allowed defects was specified vs. cluster size.

Biogeochemical Role of Subsurface Coherent Eddies in the Ocean: Tracer Cannonballs, Hypoxic Storms, and Microbial Stewpots?

NASA Astrophysics Data System (ADS)

Frenger, Ivy; Bianchi, Daniele; Stührenberg, Carolin; Oschlies, Andreas; Dunne, John; Deutsch, Curtis; Galbraith, Eric; Schütte, Florian

2018-02-01

Subsurface eddies are known features of ocean circulation, but the sparsity of observations prevents an assessment of their importance for biogeochemistry. Here we use a global eddying (0.1°) ocean-biogeochemical model to carry out a census of subsurface coherent eddies originating from eastern boundary upwelling systems (EBUS) and quantify their biogeochemical effects as they propagate westward into the subtropical gyres. While most eddies exist for a few months, moving over distances of hundreds of kilometers, a small fraction (<5%) of long-lived eddies propagates over distances greater than 1,000 km, carrying the oxygen-poor and nutrient-rich signature of EBUS into the gyre interiors. In the Pacific, transport by subsurface coherent eddies accounts for roughly 10% of the offshore transport of oxygen and nutrients in pycnocline waters. This "leakage" of subsurface waters can be a significant fraction of the transport by nutrient-rich poleward undercurrents and may contribute to the well-known reduction of productivity by eddies in EBUS. Furthermore, at the density layer of their cores, eddies decrease climatological oxygen locally by close to 10%, thereby expanding oxygen minimum zones. Finally, eddies represent low-oxygen extreme events in otherwise oxygenated waters, increasing the area of hypoxic waters by several percent and producing dramatic short-term changes that may play an important ecological role. Capturing these nonlocal effects in global climate models, which typically include noneddying oceans, would require dedicated parameterizations.

Dissociation of retinoblastoma gene protein hyperphosphorylation and commitment to enter S phase.

PubMed Central

Ogryzko, V V; Hirai, T H; Shih, C E; Howard, B H

1994-01-01

Mitogenic activities of simian virus 40 large T and small t antigens were studied in serum-deprived human diploid fibroblasts. Wild-type large T and small t cooperated in stimulating DNA synthesis and in inducing hyperphosphorylation of the Rb gene product (pRb). In contrast, a T antigen mutant defective for pRb binding (Rb- T) possessed no detectable mitogenic activity alone and failed to complement small t in stimulating DNA synthesis. Surprisingly, Rb- T and small t cooperated as strongly as wild-type T and small t with respect to pRb hyperphosphorylation. As a consequence, in two closely related conditions (i.e., stimulation by small t plus wild-type T versus small t plus Rb- T), the fraction of pRb in hyperphosphorylated forms dissociated from the fraction of cells in the S phase. These results indicate that pRb hyperphosphorylation is not always tightly coupled with a commitment to initiate DNA replication. Images PMID:8189510

Diverse Mafic Influences on the Magmatic System of the 2.08 Ma Huckleberry Ridge Eruption, Yellowstone

NASA Astrophysics Data System (ADS)

Wilson, C. J. N.; Swallow, E. J.; Charlier, B. L. A.; Gamble, J. A.

2016-12-01

The Yellowstone Plateau Volcanic Field (YPVF) is the youngest, currently active focus of the long-lived Yellowstone-Snake River Plain (YSRP) volcanic province. This province is traditionally considered to be bimodal1, with mantle-derived olivine tholeiites providing the thermal and volatile fluxes to generate the voluminous rhyolitic volcanism that forms the initial stages at each caldera focus2. There are also lesser volumes of alkalic compositions, which define a Craters of the Moon (COM) trend1. These eruptives, dominantly trachy-basalts and -andesites but continuous to high-Ba rhyolites, are often found at the margins of the YSRP and are believed to represent small-volume magma batches derived by extreme mid-crustal fractionation of a tholeiitic parent3,4. The 2,500 km3 Huckleberry Ridge Tuff (HRT), the first of three caldera-forming eruptions at the YPVF, consists of minor fall deposits followed by three voluminous ignimbrite members: A, B and C4. The HRT was preceded and followed by the eruption of YSRP olivine tholeiites within and around the inferred caldera4. Previously identified4 aphyric scoria in HRT member B, and a newly identified juvenile mafic component in HRT member A, are however more extreme in composition than the COM magma type with SiO2 of 49.3- 59.0 wt %, Na2O+K2O 4.5-6.6 wt %, Ba to 3500 ppm, Zr to 1850 ppm and P2O5 to 1.8 wt %. This `HRT-COM' trend is parallel to but offset to higher Ba from that defined by younger surficial COM-type lava flows west of the HRT caldera. We here summarise major, trace and isotopic data from these three mafic lineages, which temporally encompass the HRT. We compare them with other data of the COM suite and evaluate interpretations for their source which range from extreme fractional crystallisation to melts from metasomatised mantle. We highlight the close spatial and temporal association of the mafic lineages, despite their distinct chemical signatures, indicating the presence of complex root zones underplating the large-scale YSRP rhyolitic body or bodies during the onset of voluminous rhyolitic volcanism in the YPVF. 1Christiansen EH, McCurry M 2009: Bull Volc 70, 251; 2Leeman WP 2008: Geol Soc Lond Spec Pub 304, 235; 3Whitaker ML et al. 2008: Bull Volc 70, 417; 4Putirka KD et al. 2009: J Petrol 50, 1639; 5Christiansen RL 2001: USGS Prof Paper 729-G.

Quantities and qualities of physical and chemical fractions of soil organic matter under a rye cover crop

USDA-ARS?s Scientific Manuscript database

To detect the effects of a rye cover crop on labile soil carbon, the light fraction, large particulate organic matter (POM), small POM, and two NaOH-extractable humic fractions were extracted from three depths of a corn soil in central Iowa having an overwinter rye cover crop treatment and a contro...

Isolation and Structural Characterization of Lignin from Cotton Stalk Treated in an Ammonia Hydrothermal System

PubMed Central

Kang, Sumin; Xiao, Lingping; Meng, Lingyan; Zhang, Xueming; Sun, Runcang

2012-01-01

To investigate the potential for the utilization of cotton stalk, ammonia hydrothermal treatment was applied to fractionate the samples into aqueous ammonia-soluble and ammonia-insoluble portions. The ammonia-soluble portion was purified to yield lignin fractions. The lignin fractions obtained were characterized by wet chemistry (carbohydrate analysis) and spectroscopy methods (FT-IR, 13C and 1H-13C HSQC NMR spectroscopy) as well as gel permeation chromatography (GPC). The results showed that the cotton stalk lignin fractions were almost absent of neutral sugars (0.43%–1.29%) and had relatively low average molecular weights (1255–1746 g/mol). The lignin fractions belonged to typical G-S lignin, which was composed predominately of G-type units (59%) and noticeable amounts of S-type units (40%) together with a small amount of H-type units (~1%). Furthermore, the ammonia-extractable lignin fractions were mainly composed of β-O-4′ inter-unit linkages (75.6%), and small quantities of β-β′ (12.2%), together with lower amounts of β-5′ carbon-carbon linkages (7.4%) and p-hydroxycinnamyl alcohol end groups. PMID:23203120

Quantile-based bias correction and uncertainty quantification of extreme event attribution statements

DOE PAGES

Jeon, Soyoung; Paciorek, Christopher J.; Wehner, Michael F.

2016-02-16

Extreme event attribution characterizes how anthropogenic climate change may have influenced the probability and magnitude of selected individual extreme weather and climate events. Attribution statements often involve quantification of the fraction of attributable risk (FAR) or the risk ratio (RR) and associated confidence intervals. Many such analyses use climate model output to characterize extreme event behavior with and without anthropogenic influence. However, such climate models may have biases in their representation of extreme events. To account for discrepancies in the probabilities of extreme events between observational datasets and model datasets, we demonstrate an appropriate rescaling of the model output basedmore » on the quantiles of the datasets to estimate an adjusted risk ratio. Our methodology accounts for various components of uncertainty in estimation of the risk ratio. In particular, we present an approach to construct a one-sided confidence interval on the lower bound of the risk ratio when the estimated risk ratio is infinity. We demonstrate the methodology using the summer 2011 central US heatwave and output from the Community Earth System Model. In this example, we find that the lower bound of the risk ratio is relatively insensitive to the magnitude and probability of the actual event.« less

Fractionation of families of major, minor, and trace metals across the melt-vapor interface in volcanic exhalations

USGS Publications Warehouse

Hinkley, T.K.; Le Cloarec, M.-F.; Lambert, G.

1994-01-01

Chemical families of metals fractionate systematically as they pass from a silicate melt across the interface with the vapor phase and on into a cooled volcanic plume. We measured three groups of metals in a small suite of samples collected on filters from the plumes of Kilauea (Hawaii, USA), Etna (Sicily), and Merapi (Java) volcanoes. These were the major, minor, and trace metals of the alkali and alkaline earth families (K, Rb, Cs, Ca, Sr, Ba), a group of ordinarily rare metals (Cd, Cu, In, Pb, Tl) that are related by their chalcophile affinities, and the radon daughter nuclides 210Po, 210Bi, and 210Pb. The measurements show the range and some details of systematic melt-vapor fractionation within and between these groups of metals. In the plumes of all three volcanoes, the alkali metals are much more abundant than the alkaline earth metals. In the Kilauea plume, the alkali metals are at least six times more abundant than the alkaline earth metals, relative to abundances in the melt; at Etna, the factor is at least 300. Fractionations within each family are, commonly, also distinctive; in the Kilauea plume, in addition to the whole alkaline earth family being depleted, the heaviest metals of the family (Sr, Ba) are progressively more depleted than the light metal Ca. In plumes of fumaroles at Merapi, K/Cs ratios were approximately three orders of magnitude smaller than found in other earth materials. This may represent the largest observed enrichment of the "light ion lithophile" (LIL) metals. Changes in metal ratios were seen through the time of eruption in the plumes of Kilauea and Etna. This may reflect degree of degassing of volatiles, with which metals complex, from the magma bodies. At Kilauea, the changes in fractionation were seen over about three years; fractionation within the alkaline earth family increased, and that between the two families decreased, over that time. All of the ordinarily rare chalcophile metals measured are extremely abundant in volcanic plumes, and Cd and Tl are enriched relative to the others. Indium is much more abundant in the plume of the hotspot volcano Kilauea than in the Etna plume (probably non-hotspot in character). It may be a useful indicator of the tapping of deep mantle zones, or could aid in the interpretation of reports of Pt group metals in exhalations from hot spot volcanoes. Indium in old glacial ice strata could help assess magnitude and variability of exhalations from hotspot volcanoes in past time. Strong melt-vapor fractionation of the alkali and alkaline earth metals may only be observed in plumes during quiescent degassing of volcanoes; when large amounts of ash or spatter (undifferentiated lava) enter the plume, its alkali and alkaline earth metal composition may approach that of the melt. Ratios among the chalcophile metals may not be much changed by addition of ash, because their concentrations in melt are so small, and masses of them in any plume may remain dominated by transfer across the melt-vapor interface. Radon daughter nuclides give information about state of volcanic activity at time of sampling. The precisely known origins, ultratrace detectability, decay systematics, and wide variations in volatility of these species provide information about residence times, degassing and travel histories, and identities of melt bodies in volcanic systems. ?? 1994.

A new approach for the description of discharge extremes in small catchments

NASA Astrophysics Data System (ADS)

Pavia Santolamazza, Daniela; Lebrenz, Henning; Bárdossy, András

2017-04-01

Small catchment basins in Northwestern Switzerland, characterized by small concentration times, are frequently targeted by floods. The peak and the volume of these floods are commonly estimated by a frequency analysis of occurrence and described by a random variable, assuming a uniform distributed probability and stationary input drivers (e.g. precipitation, temperature). For these small catchments, we attempt to describe and identify the underlying mechanisms and dynamics at the occurrence of extremes by means of available high temporal resolution (10 min) observations and to explore the possibilities to regionalize hydrological parameters for short intervals. Therefore, we investigate new concepts for the flood description such as entropy as a measure of disorder and dispersion of precipitation. First findings and conclusions of this ongoing research are presented.

Investigation of the Dirac Equation by Using the Conformable Fractional Derivative

NASA Astrophysics Data System (ADS)

Mozaffari, F. S.; Hassanabadi, H.; Sobhani, H.; Chung, W. S.

2018-05-01

In this paper,the Dirac equation is constructed using the conformable fractional derivative so that in its limit for the fractional parameter, the normal version is recovered. Then, the Cornell potential is considered as the interaction of the system. In this case, the wave function and the energy eigenvalue equation are derived with the aim of the bi-confluent Heun functions. use of the conformable fractional derivative is proven to lead to a branching treatment for the energy of the system. Such a treatment is obvious for small values of the fractional parameter, and a united value as the fractional parameter approaches unity.

Therapeutic use of fractionated total body and subtotal body irradiation. [X-rays

DOE Office of Scientific and Technical Information (OSTI.GOV)

Loeffler, R.K.

1981-05-01

Ninety-one patients were treated using fractionated subtotal body (STBI) or total body irradiation (TBI). These patients had generalized lymphomas, Hodgkin's disease, leukemias, myelomas, seminomas, or oat-cell carcinomas. Subtotal body irradiation is delivered to the entire body, except for the skull and extremities. It was expected that a significantly higher radiation dose could be administered with STBI than with TBI. A five- to ten-fold increase in tolerance for STBI was demonstrated. Many of these patients have had long-term emissions. There is little or no treatment-induced symptomatology, and no sanctuary sites.

Extreme events in total ozone over the northern mid-latitudes: A case study based on long-term data sets from 5 ground-based stations

NASA Astrophysics Data System (ADS)

Rieder, Harald E.; Jancso, Leonhardt M.; Staehelin, Johannes; Maeder, Jörg A.; Ribatet, Mathieu; Peter, Thomas; Davison, Anthony C.

2010-05-01

In this study we analyze the frequency distribution of extreme events in low and high total ozone (termed ELOs and EHOs) for 5 long-term stations in the northern mid-latitudes in Europe (Belsk, Poland; Hradec Kralove, Czech Republic; Hohenpeissenberg and Potsdam, Germany; and Uccle, Belgium). Further, the influence of these extreme events on annual and seasonal mean values and trends is analysed. The applied method follows the new "ozone extreme concept", which is based on tools from extreme value theory [Coles, 2001; Ribatet, 2007], recently developed by Rieder et al. [2010a, b]. Mathematically seen the decisive feature within the extreme concept is the Generalized Pareto Distribution (GPD). In this analysis, the long-term trends needed to be removed first, differently to the treatment of Rieder et al. [2010a, b], in which the time series of Arosa was analysed, covering many decades of measurements in the anthropogenically undisturbed stratosphere. In contrast to previous studies only focusing on so called ozone mini-holes and mini-highs the "ozone extreme concept" provides a statistical description of the tails in total ozone distributions (i.e. extreme low and high values). It is shown that this concept is not only an appropriate method to describe the frequency and distribution of extreme events, it also provides new information on time series properties and internal variability. Furthermore it allows detection of fingerprints of physical (e.g. El Niño, NAO) and chemical (e.g. polar vortex ozone loss) features in the Earth's atmosphere as well as major volcanic eruptions (e.g. El Chichón, Mt. Pinatubo). It is shown that mean values and trends in total ozone are strongly influenced by extreme events. Trend calculations (for the period 1970-1990) are performed for the entire as well as the extremes-removed time series. The results after excluding extremes show that annual trends are most reduced at Hradec Kralove (about a factor of 3), followed by Potsdam (factor of 2.5), and Hohenpeissenberg and Belsk (both about a factor of 2). In general the reduction of trend is strongest during winter and spring. Throughout all stations the influence of ELOs on observed trends is larger than those of EHOs. Especially from the 1990s on ELOs dominate the picture as only a relatively small fraction of EHOs can be observed in the records (due to strong influence of Mt. Pinatubo eruption and polar vortex ozone loss contributions). Additionally it is evidenced that the number of observed mini-holes can be estimated highly accurate by the GPD-model. Overall the results of this thesis show that extreme events play a major role in total ozone and the "ozone extremes concept" provides deeper insight in the influence of chemical and physical features on column ozone. References: Coles, S.: An Introduction to Statistical Modeling of Extreme Values, Springer Series in Statistics, ISBN:1852334592, Springer, Berlin, 2001. Ribatet, M.: POT: Modelling peaks over a threshold, R News, 7, 34-36, 2007. Rieder ,H.E., Staehelin, J., Maeder, J.A., Ribatet, M., Stübi, R., Weihs, P., Holawe, F., Peter, T., and A.D., Davison (2010): Extreme events in total ozone over Arosa - Part I: Application of extreme value theory, to be submitted to ACPD. Rieder, H.E., Staehelin, J., Maeder, J.A., Ribatet, M., Stübi, R., Weihs, P., Holawe, F., Peter, T., and A.D., Davison (2010): Extreme events in total ozone over Arosa - Part II: Fingerprints of atmospheric dynamics and chemistry and effects on mean values and long-term changes, to be submitted to ACPD.

The heterogeneity statistic I(2) can be biased in small meta-analyses.

PubMed

von Hippel, Paul T

2015-04-14

Estimated effects vary across studies, partly because of random sampling error and partly because of heterogeneity. In meta-analysis, the fraction of variance that is due to heterogeneity is estimated by the statistic I(2). We calculate the bias of I(2), focusing on the situation where the number of studies in the meta-analysis is small. Small meta-analyses are common; in the Cochrane Library, the median number of studies per meta-analysis is 7 or fewer. We use Mathematica software to calculate the expectation and bias of I(2). I(2) has a substantial bias when the number of studies is small. The bias is positive when the true fraction of heterogeneity is small, but the bias is typically negative when the true fraction of heterogeneity is large. For example, with 7 studies and no true heterogeneity, I(2) will overestimate heterogeneity by an average of 12 percentage points, but with 7 studies and 80 percent true heterogeneity, I(2) can underestimate heterogeneity by an average of 28 percentage points. Biases of 12-28 percentage points are not trivial when one considers that, in the Cochrane Library, the median I(2) estimate is 21 percent. The point estimate I(2) should be interpreted cautiously when a meta-analysis has few studies. In small meta-analyses, confidence intervals should supplement or replace the biased point estimate I(2).

Supplementing formula-fed piglets with a low molecular weight fraction of bovine colostrum whey results in an improved intestinal barrier.

PubMed

De Vos, M; Huygelen, V; Van Raemdonck, G; Willemen, S; Fransen, E; Van Ostade, X; Casteleyn, C; Van Cruchten, S; Van Ginneken, C

2014-08-01

To test the hypothesis that a low molecular weight fraction of colostral whey could affect the morphology and barrier function of the small intestine, 30 3-d-old piglets (normal or low birth weight) were suckled (n = 5), artificially fed with milk formula (n = 5), or artificially fed with milk formula with a low molecular weight fraction of colostral whey (n = 5) until 10 d of age. The small intestine was sampled for histology (haematoxylin and eosin stain; anti-KI67 immunohistochemistry) and enzyme activities (aminopeptidase A, aminopeptidase N, dipeptidylpeptidase IV, lactase, maltase, and sucrase). In addition, intestinal permeability was evaluated via a dual sugar absorption test and via the measurement of occludin abundance. Artificially feeding of piglets reduced final BW (P < 0.001), villus height (P < 0.001), lactase (P < 0.001), and dipeptidylpeptidase IV activities (P < 0.07), whereas crypt depth (P < 0.001) was increased. No difference was observed with regard to the permeability measurements when comparing artificially fed with naturally suckling piglets. Supplementing piglets with the colostral whey fraction did not affect BW, enzyme activities, or the outcome of the dual sugar absorption test. On the contrary, the small intestines of supplemented piglets had even shorter villi (P = 0.001) than unsupplemented piglets and contained more occludin (P = 0.002). In conclusion, at 10 d of age, no differences regarding intestinal morphology and permeability measurements were observed between the 2 BW categories. In both weight categories, the colostral whey fraction affected the morphology of the small intestine but did not improve the growth performances or the in vivo permeability. These findings should be acknowledged when developing formulated milk for neonatal animals with the aim of improving the performance of low birth weight piglets.

33 CFR 80.105 - Calais, ME to Cape Small, ME.

Code of Federal Regulations, 2010 CFR

2010-07-01

... 33 Navigation and Navigable Waters 1 2010-07-01 2010-07-01 false Calais, ME to Cape Small, ME. 80... INTERNATIONAL NAVIGATION RULES COLREGS DEMARCATION LINES Atlantic Coast § 80.105 Calais, ME to Cape Small, ME... International Bridge at Calais, ME to the southwesternmost extremity of Bald Head at Cape Small. ...

33 CFR 80.105 - Calais, ME to Cape Small, ME.

Code of Federal Regulations, 2012 CFR

2012-07-01

... 33 Navigation and Navigable Waters 1 2012-07-01 2012-07-01 false Calais, ME to Cape Small, ME. 80... INTERNATIONAL NAVIGATION RULES COLREGS DEMARCATION LINES Atlantic Coast § 80.105 Calais, ME to Cape Small, ME... International Bridge at Calais, ME to the southwesternmost extremity of Bald Head at Cape Small. ...

33 CFR 80.105 - Calais, ME to Cape Small, ME.

Code of Federal Regulations, 2013 CFR

2013-07-01

... 33 Navigation and Navigable Waters 1 2013-07-01 2013-07-01 false Calais, ME to Cape Small, ME. 80... INTERNATIONAL NAVIGATION RULES COLREGS DEMARCATION LINES Atlantic Coast § 80.105 Calais, ME to Cape Small, ME... International Bridge at Calais, ME to the southwesternmost extremity of Bald Head at Cape Small. ...

33 CFR 80.105 - Calais, ME to Cape Small, ME.

Code of Federal Regulations, 2011 CFR

2011-07-01

... 33 Navigation and Navigable Waters 1 2011-07-01 2011-07-01 false Calais, ME to Cape Small, ME. 80... INTERNATIONAL NAVIGATION RULES COLREGS DEMARCATION LINES Atlantic Coast § 80.105 Calais, ME to Cape Small, ME... International Bridge at Calais, ME to the southwesternmost extremity of Bald Head at Cape Small. ...

Environmental Pressure May Change the Composition Protein Disorder in Prokaryotes

PubMed Central

Vicedo, Esmeralda; Schlessinger, Avner; Rost, Burkhard

2015-01-01

Many prokaryotic organisms have adapted to incredibly extreme habitats. The genomes of such extremophiles differ from their non-extremophile relatives. For example, some proteins in thermophiles sustain high temperatures by being more compact than homologs in non-extremophiles. Conversely, some proteins have increased volumes to compensate for freezing effects in psychrophiles that survive in the cold. Here, we revealed that some differences in organisms surviving in extreme habitats correlate with a simple single feature, namely the fraction of proteins predicted to have long disordered regions. We predicted disorder with different methods for 46 completely sequenced organisms from diverse habitats and found a correlation between protein disorder and the extremity of the environment. More specifically, the overall percentage of proteins with long disordered regions tended to be more similar between organisms of similar habitats than between organisms of similar taxonomy. For example, predictions tended to detect substantially more proteins with long disordered regions in prokaryotic halophiles (survive high salt) than in their taxonomic neighbors. Another peculiar environment is that of high radiation survived, e.g. by Deinococcus radiodurans. The relatively high fraction of disorder predicted in this extremophile might provide a shield against mutations. Although our analysis fails to establish causation, the observed correlation between such a simplistic, coarse-grained, microscopic molecular feature (disorder content) and a macroscopic variable (habitat) remains stunning. PMID:26252577

Dynamically sculpturing plasmonic vortices: from integer to fractional orbital angular momentum

PubMed Central

Wang, Yu; Zhao, Peng; Feng, Xue; Xu, Yuntao; Liu, Fang; Cui, Kaiyu; Zhang, Wei; Huang, Yidong

2016-01-01

As a fundamental tool for light-matter interactions, plasmonic vortex (PV) is extremely useful due to the unique near field property. However, it is a pity that, up to now, the orbital angular momentum (OAM) carried by PVs could not be dynamically and continuously tuned in practice as well as the properties of fractional PVs are still not well investigated. By comparing with two previously reported methods, it is suggested that our proposal of utilizing the propagation induced radial phase gradient of incident Laguerre-Gaussian (LG) beam is a promising candidate to sculpture PVs from integer to fractional OAM dynamically. Consequently, the preset OAM of PVs could have four composing parts: the incident spin and orbital angular momentum, the geometric contribution of chiral plasmonic structure, and the radial phase gradient dependent contribution. Moreover, an analytical expression for the fractional PV is derived as a linear superposition of infinite numbers of integer PVs described by Bessel function of the first kind. It is also shown that the actual mean OAM of a fractional PV would deviate from the preset value, which is similar with previous results for spatial fractional optical vortices. PMID:27811986

Influence of a Small Fraction of Individuals with Enhanced Mutations on a Population Genetic Pool

NASA Astrophysics Data System (ADS)

Cebrat, S.; Stauffer, D.

It has been observed that a higher mutation load could be introduced into the genomes of children conceived by assisted reproduction technology (fertilization in-vitro). This generates two effects — slightly higher mutational pressure on the whole genetic pool of population and inhomogeneity of mutation distributions in the genetic pool. Computer simulations of the Penna ageing model suggest that already a small fraction of births with enhanced number of new mutations can negatively influence the whole population.

Signatures of fractional exclusion statistics in the spectroscopy of quantum Hall droplets.

PubMed

Cooper, Nigel R; Simon, Steven H

2015-03-13

We show how spectroscopic experiments on a small Laughlin droplet of rotating bosons can directly demonstrate Haldane fractional exclusion statistics of quasihole excitations. The characteristic signatures appear in the single-particle excitation spectrum. We show that the transitions are governed by a "many-body selection rule" which allows one to relate the number of allowed transitions to the number of quasihole states on a finite geometry. We illustrate the theory with numerically exact simulations of small numbers of particles.

Quick Tips Guide for Small Manufacturing Businesses

EPA Pesticide Factsheets

Small manufacturing businesses can use this Quick Tips Guide to be better prepared for future extreme weather events. This guide discusses keeping good records, improving housekeeping procedures, and training employees.

Iron availability influences 15N-isotope fractionation during nitrogen fixation by aerobic chemoheterotroph Azotobacter vinelandii

NASA Astrophysics Data System (ADS)

Zhang, X.; Kopf, S.; Lee, A. C.

2016-12-01

The N stable isotope composition (δ15N) of biomass provides a powerful tool for reconstructing present and past N cycling, but its interpretation hinges on a complete understanding of the isotopic signature of biological nitrogen fixation, which sets the δ15N of newly fixed N. All biological nitrogen fixation is catalyzed by the metalloenzyme nitrogenase in a complex reaction that reduces inert atmospheric N2 gas into bioavailable ammonium. Recent investigations into the metal cofactor variants of nitrogenase revealed that the canonical Mo-, and alternative V-, and Fe-only isoforms of nitrogenase impart different isotope fractionations during N2 fixation in vivo, challenging the traditional view that N2 fixation only imparts small, invariable isotope effects of 0-2‰. However, the mechanistic basis for the fractionation of N2 fixation remains largely unknown. To better understand mechanisms underlying fractionation, we varied Fe availability and measured in vivo fractionations for the aerobic chemoheterotroph Azotobacter vinelandii utilizing Mo- or V-nitrogenase under batch culture conditions. Under all iron conditions, N2 fixation based on Mo-nitrogenase yielded lower fractionations (heavier biomasss δ15N) compared to V-nitrogenase. For fractionations associated with a single metalloenzyme, higher Fe concentrations, which correlated with faster growth rates, yielded small but systematically larger fractionations ( 1 ‰ increase for Mo- and V- nitrogenases). To directly determine the effect of growth rate on fractionation, we grew Mo-nitrogenase expressing A. vinelandii in Fe-replete medium at different growth rates using chemostats and found that growth rate alone does not alter fractionation. The results indicate that Fe availability, in addition to the type of nitrogenase metalloenzyme, controls 15N fractionation during N2 fixation by A. vinelandii.

Effect of cold drawing ratio on γ′ precipitation in Inconel X-750

DOE Office of Scientific and Technical Information (OSTI.GOV)

Ha, Jeong Won; Research and Development Center, KOS Limited, Yangsan 626-230; Seong, Baek Seok

2014-10-15

Inconel X-750 is a Ni-based precipitation-hardened superalloy having large tensile and fracture strengths. In the study, X-750 wires were cold drawn to different extents. Small angle neutron scattering was employed to quantitatively measure the size and volume fraction of the γ′ phase as a function of the cold drawing ratio (DR) and aging temperature. The presence and size of γ′ precipitates were confirmed by transmission electron microscopy. The drawing ratio had an important effect on the volume fraction of the γ′ precipitates. However, the size of the precipitates was independent on the drawing ratio. The specimen with the minimum drawingmore » ratio (DR0) produced the largest volume fraction of γ′ as compared with large drawing ratio (DR) specimens such as DR17 and DR42. The small volume fraction of the γ′ phase for a sizeable drawing ratio was associated with the large amount of nucleation sites for secondary carbides, M{sub 23}C{sub 6}, and the fast diffusion path, i.e., dislocation, needed to form M{sub 23}C{sub 6}. A Cr depletion zone around the secondary carbides raised the solubility of γ′. Therefore, the significant drawing ratio contributing to the large volume fraction of the secondary carbides decreased the volume fraction of the γ′ precipitates in Inconel X-750. - Highlights: • The volume fraction of secondary carbides increased with the drawing ratio. • The volume fraction of γ′ decreased as the drawing ratio increased. • The drawing ratio affected the γ′ volume fraction with no variation of the γ' size. • The volume fraction of γ′ was affected by the secondary carbide volume fraction.« less

Complex carbohydrates of red wine: characterization of the extreme diversity of neutral oligosaccharides by ESI-MS.

PubMed

Doco, Thierry; Williams, Pascale; Meudec, Emmanuelle; Cheynier, Véronique; Sommerer, Nicolas

2015-01-21

The major neutral oligosaccharides of a Carignan red wine have been characterized for the first time. The oligosaccharides were prepared after removal of phenolic compounds by polyamide chromatography and of polysaccharides by alcohol precipitation and then were fractionated by anion exchange and size-exclusion chromatography. In a second step, the glycosyl composition and linkages of wine oligosaccharides were determined. Oligosaccharide fractions were analyzed by mass spectrometry (MS) with an electrospray ionization (ESI) source and an ion trap mass analyzer after separation by hydrophilic interaction liquid chromatography on a Nucleodur HILIC column (zwitterionic sulfoalkyl betaine stationary phase). Glycosyl residue composition analysis showed the predominant presence of arabinose, with galactose, rhamnose, and mannose in lower proportion. Neutral oligosaccharides were present at a concentration of 185 mg/L in this wine. The MS spectra in the negative ion mode of the oligosaccharide fractions showed a series of oligosaccharidic structures corresponding to oligo-arabinans often linked to the basic unit α-l-Rhap-(1 → 4)-α-d-GalpA. The wine oligosaccharides identified correspond to arabino-oligosaccharides, rhamno-arabino-oligosaccharides, and different rhamnogalacturonan-arabino-oligosaccharides with DP ranging from 5 to 49, resulting from the degradation of grape cell wall pectins. Oligosaccharides have an extreme diversity, with more than 100 peaks detected in HPLC-ESI-MS spectra corresponding each to at least one oligosaccharidic structure.

Dynamic pion irradiation of unresectable soft tissue sarcomas.

PubMed

Greiner, R H; Blattmann, H J; Thum, P; Coray, A; Crawford, J F; Kann, R H; Munkel, G; Pedroni, E; von Essen, C F; Zimmermann, A

1989-11-01

Since November 1981, when pion irradiation was introduced for deep seated tumors at the Swiss Institute for Nuclear Research (SIN, now Paul Scherrer Institute, PSI) a dynamic, 3-dimensional spot scan treatment technique has been in use. To exploit this technique a special optimization treatment planning system has been designed. Of a total of 331 patients treated with pions from November 1981-December 1987, 35 were irradiated for unresectable soft tissue sarcomas. In 32/35 patients, tumor sites were retroperitoneal, pelvic or in the groin or thigh. Twenty-nine tumors had a maximum diameter of greater than 10 cm, 18 tumors of greater than 15 cm; 30 tumors had grade 2/3 and 32 Stage III B/IV A/IV B. Eight of 35 patients received a low pion total dose, 7-27 Gy. Twenty-seven patients received a total dose of 30-36 Gy, fraction size 150-170 cGy (90%-isodose), 20 fractions, 4 times per week. Of these 27 patients, severe late reactions appeared in five: 2/8 patients with extremity/groin sarcomas (1/2 caused by biopsy) and 3/19 patients with retroperitoneal/pelvic sarcomas (one a skin reaction after Actinomycin-D, one a small bowel reaction after 36 Gy, a dose no longer used). Seven of 27 patients had metastases at the beginning of irradiation. Three of 27 were treated with excisional biopsy, 9 with incisional biopsy or partial resection and in 15 patients biopsies were performed for histology only. The median follow-up of these 27 patients was 17 months (5-66). There was no progression in eight extremity/groin tumors but in 4 of 19 retroperitoneal/pelvic tumors. Three of these were marginal progressions. The actuarial 5-year rate of local tumor control is 64%; the actuarial 5-year survival rate of patients without metastases at the beginning of treatment is 58%. Dynamic spot scan pion irradiation proves to be a successful treatment technique for unresectable sarcomas with a high rate of tumor control and a very low rate of severe late reactions.

Molecular gas heating mechanisms, and star formation feedback in merger/starbursts: NGC 6240 and Arp 193 as case studies

DOE Office of Scientific and Technical Information (OSTI.GOV)

Papadopoulos, Padelis P.; Zhang, Zhi-Yu; Xilouris, E. M.

2014-06-20

We used the SPIRE/FTS instrument aboard the Herschel Space Observatory to obtain the Spectral Line Energy Distributions (SLEDs) of CO from J = 4-3 to J = 13-12 of Arp 193 and NGC 6240, two classical merger/starbursts selected from our molecular line survey of local Luminous Infrared Galaxies (L {sub IR} ≥ 10{sup 11} L {sub ☉}). The high-J CO SLEDs are then combined with ground-based low-J CO, {sup 13}CO, HCN, HCO{sup +}, CS line data and used to probe the thermal and dynamical states of their large molecular gas reservoirs. We find the two CO SLEDs strongly diverging frommore » J = 4-3 onward, with NGC 6240 having a much higher CO line excitation than Arp 193, despite their similar low-J CO SLEDs and L {sub FIR}/L {sub CO,} {sub 1} {sub –0}, L {sub HCN}/L {sub CO} (J = 1-0) ratios (proxies of star formation efficiency and dense gas mass fraction). In Arp 193, one of the three most extreme starbursts in the local universe, the molecular SLEDs indicate a small amount (∼5%-15%) of dense gas (n ≥ 10{sup 4} cm{sup –3}) unlike NGC 6240 where most of the molecular gas (∼60%-70%) is dense (n ∼ (10{sup 4}-10{sup 5}) cm{sup –3}). Strong star-formation feedback can drive this disparity in their dense gas mass fractions, and also induce extreme thermal and dynamical states for the molecular gas. In NGC 6240, and to a lesser degree in Arp 193, we find large molecular gas masses whose thermal states cannot be maintained by FUV photons from Photon-Dominated Regions. We argue that this may happen often in metal-rich merger/starbursts, strongly altering the initial conditions of star formation. ALMA can now directly probe these conditions across cosmic epoch, and even probe their deeply dust-enshrouded outcome, the stellar initial mass function averaged over galactic evolution.« less

A trypanosomal orthologue of an intermembrane space chaperone has a non-canonical function in biogenesis of the single mitochondrial inner membrane protein translocase.

PubMed

Wenger, Christoph; Oeljeklaus, Silke; Warscheid, Bettina; Schneider, André; Harsman, Anke

2017-08-01

Mitochondrial protein import is essential for Trypanosoma brucei across its life cycle and mediated by membrane-embedded heterooligomeric protein complexes, which mainly consist of trypanosomatid-specific subunits. However, trypanosomes contain orthologues of small Tim chaperones that escort hydrophobic proteins across the intermembrane space. Here we have experimentally analyzed three novel trypanosomal small Tim proteins, one of which contains only an incomplete Cx3C motif. RNAi-mediated ablation of TbERV1 shows that their import, as in other organisms, depends on the MIA pathway. Submitochondrial fractionation combined with immunoprecipitation and BN-PAGE reveals two pools of small Tim proteins: a soluble fraction forming 70 kDa complexes, consistent with hexamers and a second fraction that is tightly associated with the single trypanosomal TIM complex. RNAi-mediated ablation of the three proteins leads to a growth arrest and inhibits the formation of the TIM complex. In line with these findings, the changes in the mitochondrial proteome induced by ablation of one small Tim phenocopy the effects observed after ablation of TbTim17. Thus, the trypanosomal small Tims play an unexpected and essential role in the biogenesis of the single TIM complex, which for one of them is not linked to import of TbTim17.

Sulfur and oxygen isotope fractionation during benzene, toluene, ethyl benzene, and xylene degradation by sulfate-reducing bacteria.

PubMed

Knöller, Kay; Vogt, Carsten; Richnow, Hans-Herrmann; Weise, Stephan M

2006-06-15

We examined the oxygen and sulfur isotope fractionation of sulfate during anaerobic degradation of toluene by sulfate-reducing bacteria in culture experiments with Desulfobacula toluolica as a type strain and with an enrichment culture Zz5-7 obtained from a benzene, toluene, ethylbenzene, and xylene (BTEX)-contaminated aquifer. Sulfur isotope fractionation can show considerable variation upon sulfate reduction and may react extremely sensitively to changes in environmental conditions. In contrast, oxygen isotope fractionation seems to be less sensitive to environmental changes. Our results clearly indicate that oxygen isotope fractionation is dominated by isotope exchange with ambient water. To verify our experimental results and to test the applicability of oxygen and sulfur isotope investigations under realistic field conditions, we evaluated isotope data from two BTEX-contaminated aquifers presented in the recent literature. On a field scale, bacterial sulfate reduction may be superimposed by processes such as dispersion, adsorption, reoxidation, or mixing. The dual isotope approach enables the identification of such sulfur transformation processes. This identification is vital for a general qualitative evaluation of the natural attenuation potential of the contaminated aquifer.

THE ORIGIN AND OPTICAL DEPTH OF IONIZING RADIATION IN THE 'GREEN PEA' GALAXIES

DOE Office of Scientific and Technical Information (OSTI.GOV)

Jaskot, A. E.; Oey, M. S.

2013-04-01

Although Lyman-continuum (LyC) radiation from star-forming galaxies likely drove the reionization of the universe, observations of star-forming galaxies at low redshift generally indicate low LyC escape fractions. However, the extreme [O III]/[O II] ratios of the z = 0.1-0.3 Green Pea galaxies may be due to high escape fractions of ionizing radiation. To analyze the LyC optical depths and ionizing sources of these rare, compact starbursts, we compare nebular photoionization and stellar population models with observed emission lines in the Peas' Sloan Digital Sky Survey (SDSS) spectra. We focus on the six most extreme Green Peas, the galaxies with themore » highest [O III]/[O II] ratios and the best candidates for escaping ionizing radiation. The Balmer line equivalent widths and He I {lambda}3819 emission in the extreme Peas support young ages of 3-5 Myr, and He II {lambda}4686 emission in five extreme Peas signals the presence of hard ionizing sources. Ionization by active galactic nuclei or high-mass X-ray binaries is inconsistent with the Peas' line ratios and ages. Although stacked spectra reveal no Wolf-Rayet (WR) features, we tentatively detect WR features in the SDSS spectra of three extreme Peas. Based on the Peas' ages and line ratios, we find that WR stars, chemically homogeneous O stars, or shocks could produce the observed He II emission. If hot stars are responsible, then the Peas' optical depths are ambiguous. However, accounting for emission from shocks lowers the inferred optical depth and suggests that the Peas may be optically thin. The Peas' ages likely optimize the escape of LyC radiation; they are old enough for supernovae and stellar winds to reshape the interstellar medium, but young enough to possess large numbers of UV-luminous O or WR stars.« less

Small-scale structure and 21cm fluctuations by primordial black holes

DOE Office of Scientific and Technical Information (OSTI.GOV)

Gong, Jinn-Ouk; Kitajima, Naoya, E-mail: jinn-ouk.gong@apctp.org, E-mail: kitajima.naoya@f.mbox.nagoya-u.ac.jp

We discuss early structure formation of small scales sourced by primordial black holes (PBHs) which constitute a small part of present cold dark matter component. We calculate the mass function and power spectrum of haloes originated from the Poisson fluctuations of PBH number and show that the number of small haloes is significantly modified in the presence of PBHs even if their fraction accounts for only 10{sup −4}–10{sup −3} of total dark matter abundance. We then compute the subsequent 21cm signature from those haloes. We find that PBHs can provide major contributions at high redshifts within the detectability of futuremore » experiments such as Square Kilometer Array, and provide a forecast constraint on the PBH fraction.« less

Multiple sessions of transcranial direct current stimulation and upper extremity rehabilitation in stroke: A review and meta-analysis.

PubMed

Tedesco Triccas, L; Burridge, J H; Hughes, A M; Pickering, R M; Desikan, M; Rothwell, J C; Verheyden, G

2016-01-01

To systematically review the methodology in particular treatment options and outcomes and the effect of multiple sessions of transcranial direct current stimulation (tDCS) with rehabilitation programmes for upper extremity recovery post stroke. A search was conducted for randomised controlled trials involving tDCS and rehabilitation for the upper extremity in stroke. Quality of included studies was analysed using the Modified Downs and Black form. The extent of, and effect of variation in treatment parameters such as anodal, cathodal and bi-hemispheric tDCS on upper extremity outcome measures of impairment and activity were analysed using meta-analysis. Nine studies (371 participants with acute, sub-acute and chronic stroke) were included. Different methodologies of tDCS and upper extremity intervention, outcome measures and timing of assessments were identified. Real tDCS combined with rehabilitation had a small non-significant effect of +0.11 (p=0.44) and +0.24 (p=0.11) on upper extremity impairments and activities at post-intervention respectively. Various tDCS methods have been used in stroke rehabilitation. The evidence so far is not statistically significant, but is suggestive of, at best, a small beneficial effect on upper extremity impairment. Future research should focus on which patients and rehabilitation programmes are likely to respond to different tDCS regimes. Copyright © 2015 International Federation of Clinical Neurophysiology. Published by Elsevier Ireland Ltd. All rights reserved.

Composting in small laboratory pilots: Performance and reproducibility

DOE Office of Scientific and Technical Information (OSTI.GOV)

Lashermes, G.; Barriuso, E.; Le Villio-Poitrenaud, M.

2012-02-15

Highlights: Black-Right-Pointing-Pointer We design an innovative small-scale composting device including six 4-l reactors. Black-Right-Pointing-Pointer We investigate the performance and reproducibility of composting on a small scale. Black-Right-Pointing-Pointer Thermophilic conditions are established by self-heating in all replicates. Black-Right-Pointing-Pointer Biochemical transformations, organic matter losses and stabilisation are realistic. Black-Right-Pointing-Pointer The organic matter evolution exhibits good reproducibility for all six replicates. - Abstract: Small-scale reactors (<10 l) have been employed in composting research, but few attempts have assessed the performance of composting considering the transformations of organic matter. Moreover, composting at small scales is often performed by imposing a fixed temperature, thus creatingmore » artificial conditions, and the reproducibility of composting has rarely been reported. The objectives of this study are to design an innovative small-scale composting device safeguarding self-heating to drive the composting process and to assess the performance and reproducibility of composting in small-scale pilots. The experimental setup included six 4-l reactors used for composting a mixture of sewage sludge and green wastes. The performance of the process was assessed by monitoring the temperature, O{sub 2} consumption and CO{sub 2} emissions, and characterising the biochemical evolution of organic matter. A good reproducibility was found for the six replicates with coefficients of variation for all parameters generally lower than 19%. An intense self-heating ensured the existence of a spontaneous thermophilic phase in all reactors. The average loss of total organic matter (TOM) was 46% of the initial content. Compared to the initial mixture, the hot water soluble fraction decreased by 62%, the hemicellulose-like fraction by 68%, the cellulose-like fraction by 50% and the lignin-like fractions by 12% in the final compost. The TOM losses, compost stabilisation and evolution of the biochemical fractions were similar to observed in large reactors or on-site experiments, excluding the lignin degradation, which was less important than in full-scale systems. The reproducibility of the process and the quality of the final compost make it possible to propose the use of this experimental device for research requiring a mass reduction of the initial composted waste mixtures.« less

MEASUREMENT OF SMALL MECHANICAL VIBRATIONS OF BRAIN TISSUE EXPOSED TO EXTREMELY-LOW-FREQUENCY ELECTRIC FIELDS

EPA Science Inventory

Electromagnetic fields can interact with biological tissue both electrically and mechanically. This study investigated the mechanical interaction between brain tissue and an extremely-low-frequency (ELF) electric field by measuring the resultant vibrational amplitude. The exposur...

The influence of particles recycling on the geochemistry of sediments in a large tropical dam lake in the Amazonian region, Brazil

NASA Astrophysics Data System (ADS)

Fonseca, Rita; Pinho, Catarina; Oliveira, Manuela

2016-12-01

As a result of over-erosion of soils, the fine particles, which contain the majority of nutrients, are easily washed away from soils, which become deficient in a host of components, accumulating in lakes. On one hand, the accumulation of nutrients-rich sediments are a problem, as they affect the quality of the overlying water and decrease the water storage capacity of the system; on the other hand, sediments may constitute an important resource, as they are often extremely rich in organic and inorganic nutrients in readily available forms. In the framework of an extensive work on the use of rock related materials to enhance the fertility of impoverish soils, this study aimed to evaluate the role on the nutrients cycle, of particles recycling processes from the watershed to the bottom of a large dam reservoir, at a wet tropical region under high weathering conditions. The study focus on the mineralogical transformations that clay particles undergo from the soils of the drainage basin to their final deposition within the reservoir and their influence in terms of the geochemical characteristics of sediments. We studied the bottom sediments that accumulate in two distinct seasonal periods in Tucuruí reservoir, located in the Amazonian Basin, Brazil, and soils from its drainage basin. The surface layers of sediments in twenty sampling points with variable depths, are representative of the different morphological sections of the reservoir. Nineteen soil samples, representing the main soil classes, were collected near the margins of the reservoir. Sediments and soils were subjected to the same array of physical, mineralogical and geochemical analyses: (1) texture, (2) characterization and semi-quantification of the clay fraction mineralogy and (3) geochemical analysis of the total concentration of major elements, organic compounds (organic C and nitrogen), soluble fractions of nutrients (P and K), exchangeable fractions (cation exchange capacity, exchangeable bases and acidity) and pH(H2O). There is a remarkable homogeneity in the sedimentary distribution along the reservoir in terms of the texture and mineralogy of the clay fraction and of the chemistry of the total, soluble and exchangeable phases. These observations contrast with the physical, morphological and chemical heterogeneity of the soils and the setting lithology. Most of the sediments has a higher contribution of fine-grained material and the mineralogy of the clay fraction is dominated by kaolinite in soils and kaolinite and illite in sediments, followed by lesser amounts of gibbsite, goethite, and metahaloisite and by small/vestigial contents of chlorite and smectite. The sediments are mainly inherited from the watershed but there exist marked differences between the accumulated sediments and their parent materials. These differences mainly come from the selective erosion of fine-grained particles and the extreme climatic conditions which enhance complex transformations of mineralogical and chemical nature. Compared with the parental soils, the reservoir sediments show the following differences: (1) enrichment in fine-grained and less dense inorganic particles, (2) aggradative mineralogical transformations, including enrichment in clay minerals with higher cationic adsorption and exchange capacity, (3) degradation of the crystalline structure of Fe- and Al-oxides (goethite, gibbsite), (4) increase in easily leached elements (Mg, Ca, P, K, Na) and decrease in chemically less mobile elements (Si, Fe) and (5) higher contents of organic carbon, nitrogen, and soluble forms of P and K, mainly concentrated in the clay fraction. These transformations are extremely important in the nutrients cycle, denoting that sediments represent an efficient sink for nutrients from the over-erosion of soils. Mineral and organic compounds can permanently or temporarily sequester these nutrients, recycling them and enhancing their availability through the slow release of components from relatively loose crystal structures. These processes can easily explain the enrichment in soluble and exchangeable forms of elements such as P, K, Ca or Mg. This study conclude that the particles recycling in a large tropical dam reservoir which receives high fluxes of allochthonous nutrients, has an important role in the good quality of sediments for agricultural use and in the profitable use of this technology to recover depleted soils in remediation projects in regions near large hydroelectric plants.

Thermomechanical Fractional Model of TEMHD Rotational Flow

PubMed Central

Hamza, F.; Abd El-Latief, A.; Khatan, W.

2017-01-01

In this work, the fractional mathematical model of an unsteady rotational flow of Xanthan gum (XG) between two cylinders in the presence of a transverse magnetic field has been studied. This model consists of two fractional parameters α and β representing thermomechanical effects. The Laplace transform is used to obtain the numerical solutions. The fractional parameter influence has been discussed graphically for the functions field distribution (temperature, velocity, stress and electric current distributions). The relationship between the rotation of both cylinders and the fractional parameters has been discussed on the functions field distribution for small and large values of time. PMID:28045941

Multi-scale Modeling of Arctic Clouds

NASA Astrophysics Data System (ADS)

Hillman, B. R.; Roesler, E. L.; Dexheimer, D.

2017-12-01

The presence and properties of clouds are critically important to the radiative budget in the Arctic, but clouds are notoriously difficult to represent in global climate models (GCMs). The challenge stems partly from a disconnect in the scales at which these models are formulated and the scale of the physical processes important to the formation of clouds (e.g., convection and turbulence). Because of this, these processes are parameterized in large-scale models. Over the past decades, new approaches have been explored in which a cloud system resolving model (CSRM), or in the extreme a large eddy simulation (LES), is embedded into each gridcell of a traditional GCM to replace the cloud and convective parameterizations to explicitly simulate more of these important processes. This approach is attractive in that it allows for more explicit simulation of small-scale processes while also allowing for interaction between the small and large-scale processes. The goal of this study is to quantify the performance of this framework in simulating Arctic clouds relative to a traditional global model, and to explore the limitations of such a framework using coordinated high-resolution (eddy-resolving) simulations. Simulations from the global model are compared with satellite retrievals of cloud fraction partioned by cloud phase from CALIPSO, and limited-area LES simulations are compared with ground-based and tethered-balloon measurements from the ARM Barrow and Oliktok Point measurement facilities.

LoCuSS: connecting the dominance and shape of brightest cluster galaxies with the assembly history of massive clusters

NASA Astrophysics Data System (ADS)

Smith, Graham P.; Khosroshahi, Habib G.; Dariush, A.; Sanderson, A. J. R.; Ponman, T. J.; Stott, J. P.; Haines, C. P.; Egami, E.; Stark, D. P.

2010-11-01

We study the luminosity gap, Δm12, between the first- and second-ranked galaxies in a sample of 59 massive (~1015Msolar) galaxy clusters, using data from the Hale Telescope, the Hubble Space Telescope, Chandra and Spitzer. We find that the Δm12 distribution, p(Δm12), is a declining function of Δm12 to which we fitted a straight line: p(Δm12) ~ -(0.13 +/- 0.02)Δm12. The fraction of clusters with `large' luminosity gaps is p(Δm12 >= 1) = 0.37 +/- 0.08, which represents a 3σ excess over that obtained from Monte Carlo simulations of a Schechter function that matches the mean cluster galaxy luminosity function. We also identify four clusters with `extreme' luminosity gaps, Δm12 >= 2, giving a fraction of . More generally, large luminosity gap clusters are relatively homogeneous, with elliptical/discy brightest cluster galaxies (BCGs), cuspy gas density profiles (i.e. strong cool cores), high concentrations and low substructure fractions. In contrast, small luminosity gap clusters are heterogeneous, spanning the full range of boxy/elliptical/discy BCG morphologies, the full range of cool core strengths and dark matter concentrations, and have large substructure fractions. Taken together, these results imply that the amplitude of the luminosity gap is a function of both the formation epoch and the recent infall history of the cluster. `BCG dominance' is therefore a phase that a cluster may evolve through and is not an evolutionary `cul-de-sac'. We also compare our results with semi-analytic model predictions based on the Millennium Simulation. None of the models is able to reproduce all of the observational results on Δm12, underlining the inability of the current generation of models to match the empirical properties of BCGs. We identify the strength of active galactic nucleus feedback and the efficiency with which cluster galaxies are replenished after they merge with the BCG in each model as possible causes of these discrepancies.

Iron isotopic fractionation between silicate mantle and metallic core at high pressure

PubMed Central

Liu, Jin; Dauphas, Nicolas; Roskosz, Mathieu; Hu, Michael Y.; Yang, Hong; Bi, Wenli; Zhao, Jiyong; Alp, Esen E.; Hu, Justin Y.; Lin, Jung-Fu

2017-01-01

The +0.1‰ elevated 56Fe/54Fe ratio of terrestrial basalts relative to chondrites was proposed to be a fingerprint of core-mantle segregation. However, the extent of iron isotopic fractionation between molten metal and silicate under high pressure–temperature conditions is poorly known. Here we show that iron forms chemical bonds of similar strengths in basaltic glasses and iron-rich alloys, even at high pressure. From the measured mean force constants of iron bonds, we calculate an equilibrium iron isotope fractionation between silicate and iron under core formation conditions in Earth of ∼0–0.02‰, which is small relative to the +0.1‰ shift of terrestrial basalts. This result is unaffected by small amounts of nickel and candidate core-forming light elements, as the isotopic shifts associated with such alloying are small. This study suggests that the variability in iron isotopic composition in planetary objects cannot be due to core formation. PMID:28216664

Minimum important differences for the patient-specific functional scale, 4 region-specific outcome measures, and the numeric pain rating scale.

PubMed

Abbott, J Haxby; Schmitt, John

2014-08-01

Multicenter, prospective, longitudinal cohort study. To investigate the minimum important difference (MID) of the Patient-Specific Functional Scale (PSFS), 4 region-specific outcome measures, and the numeric pain rating scale (NPRS) across 3 levels of patient-perceived global rating of change in a clinical setting. The MID varies depending on the external anchor defining patient-perceived "importance." The MID for the PSFS has not been established across all body regions. One thousand seven hundred eight consecutive patients with musculoskeletal disorders were recruited from 5 physical therapy clinics. The PSFS, NPRS, and 4 region-specific outcome measures-the Oswestry Disability Index, Neck Disability Index, Upper Extremity Functional Index, and Lower Extremity Functional Scale-were assessed at the initial and final physical therapy visits. Global rating of change was assessed at the final visit. MID was calculated for the PSFS and NPRS (overall and for each body region), and for each region-specific outcome measure, across 3 levels of change defined by the global rating of change (small, medium, large change) using receiver operating characteristic curve methodology. The MID for the PSFS (on a scale from 0 to 10) ranged from 1.3 (small change) to 2.3 (medium change) to 2.7 (large change), and was relatively stable across body regions. MIDs for the NPRS (-1.5 to -3.5), Oswestry Disability Index (-12), Neck Disability Index (-14), Upper Extremity Functional Index (6 to 11), and Lower Extremity Functional Scale (9 to 16) are also reported. We reported the MID for small, medium, and large patient-perceived change on the PSFS, NPRS, Oswestry Disability Index, Neck Disability Index, Upper Extremity Functional Index, and Lower Extremity Functional Scale for use in clinical practice and research.

Matter-Radiation Interactions in Extremes

Science.gov Websites

to resolve this capability gap. An experimental explosive is shown igniting during small-scale impact testing. An experimental explosive is shown igniting during small-scale impact testing. Accelerating in to

Skeletal muscle magnetic resonance biomarkers correlate with function and sentinel events in Duchenne muscular dystrophy.

PubMed

Barnard, Alison M; Willcocks, Rebecca J; Finanger, Erika L; Daniels, Michael J; Triplett, William T; Rooney, William D; Lott, Donovan J; Forbes, Sean C; Wang, Dah-Jyuu; Senesac, Claudia R; Harrington, Ann T; Finkel, Richard S; Russman, Barry S; Byrne, Barry J; Tennekoon, Gihan I; Walter, Glenn A; Sweeney, H Lee; Vandenborne, Krista

2018-01-01

To provide evidence for quantitative magnetic resonance (qMR) biomarkers in Duchenne muscular dystrophy by investigating the relationship between qMR measures of lower extremity muscle pathology and functional endpoints in a large ambulatory cohort using a multicenter study design. MR spectroscopy and quantitative imaging were implemented to measure intramuscular fat fraction and the transverse magnetization relaxation time constant (T2) in lower extremity muscles of 136 participants with Duchenne muscular dystrophy. Measures were collected at 554 visits over 48 months at one of three imaging sites. Fat fraction was measured in the soleus and vastus lateralis using MR spectroscopy, while T2 was assessed using MRI in eight lower extremity muscles. Ambulatory function was measured using the 10m walk/run, climb four stairs, supine to stand, and six minute walk tests. Significant correlations were found between all qMR and functional measures. Vastus lateralis qMR measures correlated most strongly to functional endpoints (|ρ| = 0.68-0.78), although measures in other rapidly progressing muscles including the biceps femoris (|ρ| = 0.63-0.73) and peroneals (|ρ| = 0.59-0.72) also showed strong correlations. Quantitative MR biomarkers were excellent indicators of loss of functional ability and correlated with qualitative measures of function. A VL FF of 0.40 was an approximate lower threshold of muscle pathology associated with loss of ambulation. Lower extremity qMR biomarkers have a robust relationship to clinically meaningful measures of ambulatory function in Duchenne muscular dystrophy. These results provide strong supporting evidence for qMR biomarkers and set the stage for their potential use as surrogate outcomes in clinical trials.

Compound Extremes and Bunched Black (or Grouped Grey) Swans.

NASA Astrophysics Data System (ADS)

Watkins, Nicholas

2013-04-01

Observed "wild" natural fluctuations may differ substantially in their character. Some events may be genuinely unforeseen (and unforeseeable), as with Taleb's "black swans". These may occur singly, or may have their impact further magnified by being ``bunched" in time. Some of the others may, however, be the rare extreme events from a light-tailed underlying distribution. Studying their occurrence may then be tractable with the methods of extreme value theory [e.g. Coles, 2001], suitably adapted to allow correlation if that is observed to be present. Yet others may belong to a third broad class, described in today's presentation [ reviewed in Watkins, GRL Frontiers, 2013, doi: 10.1002/grl.50103]. Such "bursty" time series may show comparatively frequent high amplitude events, and/or long range correlations between successive values. The frequent large values due to the first of these effects, modelled in economics by Mandelbrot in 1963 using heavy- tailed probability distributions, can give rise to an "IPCC type I" burst composed of successive wild events. Conversely, long range dependence, even in a light-tailed Gaussian model like Mandelbrot and van Ness' fractional Brownian motion, can integrate ``mild" events into an extreme "IPCC type III" burst. I will show how a standard statistical time series model, linear fractional stable motion (LFSM), which descends from the two special cases advocated by Mandelbrot, allows these two effects to be varied independently, and will present results from a preliminary study of such bursts in LFSM. The consequences for burst scaling when low frequency effects due to dissipation (FARIMA models), and multiplicative cascades (such as multifractals) are included will also be discussed, and the physical assumptions and constraints associated with making a given choice of model.

Nitrification during extended co-composting of extreme mixtures of green waste and solid fraction of cattle slurry to obtain growing media.

PubMed

Cáceres, Rafaela; Coromina, Narcís; Malińska, Krystyna; Martínez-Farré, F Xavier; López, Marga; Soliva, Montserrat; Marfà, Oriol

2016-12-01

Next generation of waste management systems should apply product-oriented bioconversion processes that produce composts or biofertilisers of desired quality that can be sold in high priced markets such as horticulture. Natural acidification linked to nitrification can be promoted during composting. If nitrification is enhanced, suitable compost in terms of pH can be obtained for use in horticultural substrates. Green waste compost (GW) represents a potential suitable product for use in growing medium mixtures. However its low N provides very limited slow-release nitrogen fertilization for suitable plant growth; and GW should be composted with a complementary N-rich raw material such as the solid fraction of cattle slurry (SFCS). Therefore, it is important to determine how very different or extreme proportions of the two materials in the mixture can limit or otherwise affect the nitrification process. The objectives of this work were two-fold: (a) To assess the changes in chemical and physicochemical parameters during the prolonged composting of extreme mixtures of green waste (GW) and separated cattle slurry (SFCS) and the feasibility of using the composts as growing media. (b) To check for nitrification during composting in two different extreme mixtures of GW and SFCS and to describe the conditions under which this process can be maintained and its consequences. The physical and physicochemical properties of both composts obtained indicated that they were appropriate for use as ingredients in horticultural substrates. The nitrification process occurred in both mixtures in the medium-late thermophilic stage of the composting process. In particular, its feasibility has been demonstrated in the mixtures with a low N content. Nitrification led to the inversion of each mixture's initial pH. Copyright © 2016 Elsevier Ltd. All rights reserved.

The Robust Relationship Between Extreme Precipitation and Convective Organization in Idealized Numerical Modeling Simulations

NASA Astrophysics Data System (ADS)

Bao, Jiawei; Sherwood, Steven C.; Colin, Maxime; Dixit, Vishal

2017-10-01

The behavior of tropical extreme precipitation under changes in sea surface temperatures (SSTs) is investigated with the Weather Research and Forecasting Model (WRF) in three sets of idealized simulations: small-domain tropical radiative-convective equilibrium (RCE), quasi-global "aquapatch", and RCE with prescribed mean ascent from the tropical band in the aquapatch. We find that, across the variations introduced including SST, large-scale circulation, domain size, horizontal resolution, and convective parameterization, the change in the degree of convective organization emerges as a robust mechanism affecting extreme precipitation. Higher ratios of change in extreme precipitation to change in mean surface water vapor are associated with increases in the degree of organization, while lower ratios correspond to decreases in the degree of organization. The spread of such changes is much larger in RCE than aquapatch tropics, suggesting that small RCE domains may be unreliable for assessing the temperature-dependence of extreme precipitation or convective organization. When the degree of organization does not change, simulated extreme precipitation scales with surface water vapor. This slightly exceeds Clausius-Clapeyron (CC) scaling, because the near-surface air warms 10-25% faster than the SST in all experiments. Also for simulations analyzed here with convective parameterizations, there is an increasing trend of organization with SST.

Survival of Escherichia coli after isoelectric solubilization and precipitation of fish protein.

PubMed

Lansdowne, L R; Beamer, S; Jaczynski, J; Matak, K E

2009-07-01

Protein recovery for fish processing by-products utilizes extreme pH shifts for isoelectric solubilization and precipitation. The purpose of this study was to determine if Escherichia coli would survive exposure to the extreme pH shifts during the protein recovery process. Fresh rainbow trout were beheaded, gutted, and minced and then inoculated with approximately 10(9) CFU of E. coli ATCC 25922 per g, homogenized, and brought to the target pH of 2.0, 3.0, 11.5, or 12.5 by the addition of concentrated hydrochloric acid or sodium hydroxide to solubilize muscle proteins. The homogenate was blended and centrifuged to separate the lipid and insoluble components (bones, skin, insoluble protein, etc.) from the protein solution. The protein solution was subjected to a second pH shift (pH 5.5) resulting in protein precipitation that was recovered with centrifugation. Microbial analysis was conducted on each fraction (i.e., lipid, insoluble components, protein, and water) with selective and nonselective media. The sums of the surviving E. coli in these fractions were compared with the initial inoculum. The greatest total microbial reduction occurred when the pH was shifted to 12.5 (P < 0.05), i.e., a 4.4-log reduction of cells on nonselective media and a 6.0-log reduction of cells on selective media. The use of selective and nonselective media showed that there was significant (P < 0.05) injury sustained by cells exposed to alkaline treatment (pH 11.5 and 12.5) in all fractions except the insoluble fraction at pH 11.5. Increasing the exposure time or the pH may result in greater bacterial reductions in the recovered protein.

mirRICH, a simple method to enrich the small RNA fraction from over-dried RNA pellets.

PubMed

Choi, Cheolwon; Yoon, Seulgi; Moon, Hyesu; Bae, Yun-Ui; Kim, Chae-Bin; Diskul-Na-Ayudthaya, Penchatr; Ngu, Trinh Van; Munir, Javaria; Han, JaeWook; Park, Se Bin; Moon, Jong-Seok; Song, Sujung; Ryu, Seongho

2018-04-11

Techniques to isolate the small RNA fraction (<200nt) by column-based methods are commercially available. However, their use is limited because of the relatively high cost. We found that large RNA molecules, including mRNAs and rRNAs, are aggregated together in the presence of salts when RNA pellets are over-dried. Moreover, once RNA pellets are over-dried, large RNA molecules are barely soluble again during the elution process, whereas small RNA molecules (<100nt) can be eluted. We therefore modified the acid guanidinium thiocyanate-phenol-chloroform (AGPC)-based RNA extraction protocol by skipping the 70% ethanol washing step and over-drying the RNA pellet for 1 hour at room temperature. We named this novel small RNA isolation method "mirRICH." The quality of the small RNA sequences was validated by electrophoresis, next-generation sequencing, and quantitative PCR, and the findings support that our newly developed column-free method can successfully and efficiently isolate small RNAs from over-dried RNA pellets.

Trojan Binaries

NASA Astrophysics Data System (ADS)

Noll, K. S.

2017-12-01

The Jupiter Trojans, in the context of giant planet migration models, can be thought of as an extension of the small body populations found beyond Neptune in the Kuiper Belt. Binaries are a distinctive feature of small body populations in the Kuiper Belt with an especially high fraction apparent among the brightest Cold Classicals. The binary fraction, relative sizes, and separations in the dynamically excited populations (Scattered, Resonant) reflects processes that may have eroded a more abundant initial population. This trend continues in the Centaurs and Trojans where few binaries have been found. We review new evidence including a third resolved Trojan binary and lightcurve studies to understand how the Trojans are related to the small body populations that originated in the outer protoplanetary disk.

The Small Nuclear Genomes of Selaginella Are Associated with a Low Rate of Genome Size Evolution.

PubMed

Baniaga, Anthony E; Arrigo, Nils; Barker, Michael S

2016-06-03

The haploid nuclear genome size (1C DNA) of vascular land plants varies over several orders of magnitude. Much of this observed diversity in genome size is due to the proliferation and deletion of transposable elements. To date, all vascular land plant lineages with extremely small nuclear genomes represent recently derived states, having ancestors with much larger genome sizes. The Selaginellaceae represent an ancient lineage with extremely small genomes. It is unclear how small nuclear genomes evolved in Selaginella We compared the rates of nuclear genome size evolution in Selaginella and major vascular plant clades in a comparative phylogenetic framework. For the analyses, we collected 29 new flow cytometry estimates of haploid genome size in Selaginella to augment publicly available data. Selaginella possess some of the smallest known haploid nuclear genome sizes, as well as the lowest rate of genome size evolution observed across all vascular land plants included in our analyses. Additionally, our analyses provide strong support for a history of haploid nuclear genome size stasis in Selaginella Our results indicate that Selaginella, similar to other early diverging lineages of vascular land plants, has relatively low rates of genome size evolution. Further, our analyses highlight that a rapid transition to a small genome size is only one route to an extremely small genome. © The Author 2016. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution.

Quantitative and qualitative responses of soil organic carbon to six years of extreme soil warming in a subarctic grassland in Iceland

NASA Astrophysics Data System (ADS)

Poeplau, Christopher; Leblans, Niki I. W.; Sigurdsson, Bjarni D.; Kätterer, Thomas

2016-04-01

Terrestrial carbon cycle feedbacks to global warming are expected, but constitute a major uncertainty in climate models. Soils in northern latitudes store a large proportion of the total global biosphere carbon stock and might thus become a strong source of CO2 when warmed. Long-term in situ observations of warming effects on soil organic carbon (SOC) dynamics are indispensable for an in depth understanding of the involved processes. We investigated the effect of six years of soil warming on SOC quantity and quality in a geothermally heated grassland soil in Iceland. We isolated five fractions of SOC along an extreme soil warming gradient of +0 to +40°C. Those fractions vary conceptually in turnover time from active to passive in the following order: particulate organic matter (POM), dissolved organic carbon (DOC), SOC in sand and stable aggregates (SA), SOC in silt and clay (SC-rSOC) and resistant SOC (rSOC). Soil warming of 1°C increased bulk SOC by 22% (0-10 cm) and 27% (20-30 cm), while further warming led to exponential SOC depletion of up to 79% (0-10 cm) and 74% (20-30) in the most heated plots (~ +40°C). Only the SA fraction was more sensitive than the bulk soil, with 93% (0-10 cm) and 86% (20-30 cm) losses and with the highest relative enrichment in 13C (+1.6‰ in 0-10 cm and +1.3‰ in 20-30 cm). In addition, the mass of the SA fraction did significantly decline along the warming gradient, which we explained by devitalization of aggregate binding mechanisms. As a consequence, the fine SC fraction mass increased with warming which explained the relative enrichment of presumably more slow-cycling SOC (R2=0.61 in 0-10 cm and R2=0.92 in 20-30 cm). Unexpectedly, no difference was observed between the responses of SC-rSOC (slow-cycling) and rSOC (passive) to warming. Furthermore, the 13C enrichment by trophic fractionation in the passive rSOC fraction was equal to this in the bulk soil. We therefore conclude that the sensitivity of SOC to warming was not a function of age or chemical recalcitrance, but rather triggered by changes in bio-physical stabilization mechanisms, such as aggregation.

Cloud Chemistry of Fallout Formation

DTIC Science & Technology

1968-01-31

SILICATES ....... 19 LEACHING STUDIES ..... ............................ 26 HIGH-TEMPERATURE MASS SPECTROMETRY ............... 31 Rare-Earth Oxide ...reactions between technetium oxides ................. 39 TABLES 1 . Small Boy particle size-weight fraction description (each particle size fraction...29 9. Rare-earth oxide thermodynamics (Reaction 15) ............... 32 10. Enthalpies for gas-phase reactions

Insight into the bacterial diversity of fermentation woad dye vats as revealed by PCR-DGGE and pyrosequencing.

PubMed

Milanović, Vesna; Osimani, Andrea; Taccari, Manuela; Garofalo, Cristiana; Butta, Alessandro; Clementi, Francesca; Aquilanti, Lucia

2017-07-01

The bacterial diversity in fermenting dye vats with woad (Isatis tinctoria L.) prepared and maintained in a functional state for approximately 12 months was examined using a combination of culture-dependent and -independent PCR-DGGE analyses and next-generation sequencing of 16S rRNA amplicons. An extremely complex ecosystem including taxa potentially contributing to both indigo reduction and formation, as well as indigo degradation was found. PCR-DGGE analyses revealed the presence of Paenibacillus lactis, Sporosarcina koreensis, Bacillus licheniformis, and Bacillus thermoamylovorans, while Bacillus thermolactis, Bacillus pumilus and Bacillus megaterium were also identified but with sequence identities lower than 97%. Dominant operational taxonomic units (OTUs) identified by pyrosequencing included Clostridium ultunense, Tissierella spp., Alcaligenes faecalis, Erysipelothrix spp., Enterococcus spp., Virgibacillus spp. and Virgibacillus panthothenicus, while sub-dominant OTUs included clostridia, alkaliphiles, halophiles, bacilli, moderately thermophilic bacteria, lactic acid bacteria, Enterobacteriaceae, aerobes, and even photosynthetic bacteria. Based on the current knowledge of indigo-reducing bacteria, it is considered that indigo-reducing bacteria constituted only a small fraction in the unique microcosm detected in the natural indigo dye vats.

Time Not Our Time: Physical Controls on the Preservation and Measurement of Geologic Time

NASA Astrophysics Data System (ADS)

Paola, Chris; Ganti, Vamsi; Mohrig, David; Runkel, Anthony C.; Straub, Kyle M.

2018-05-01

Sadler's (1981) analysis of how measured sedimentation rate decreases with timescale of measurement quantified the vanishingly small fractional time preservation—completeness—of the stratigraphic record. Generalized numerical models have shown that the Sadler effect can be recovered, through the action of erosional clipping and time removal (the “stratigraphic filter”), from even fairly simple topographic sequences. However, several lines of evidence suggest that most of the missing time has not been eroded out but rather represents periods of inactivity or stasis. Low temporal completeness could also imply that the stratigraphic record is dominated by rare, extreme events, but paleotransport estimates suggest that this is not generally the case: The stratigraphic record is strangely ordinary. It appears that the organization of the topography into a hierarchy of forms also organizes the deposition into concentrated events that tend to preserve relatively ordinary conditions, albeit for very short intervals. Our understanding of time preservation would benefit from insight about how inactivity is recorded in strata; better ways to constrain localized, short-term rates of deposition; and a new focus on integrated time–space dynamics of deposition and preservation.

A New Spin to Exoplanet Habitability Criteria

NASA Astrophysics Data System (ADS)

Georgoulis, M. K.; Patsourakos, S.

2017-12-01

We describe a physically- and statistically-based method to infer the near-Sun magnetic field of coronal mass ejections (CMEs) and then extrapolate it to the inner heliosphere and beyond. Besides a ballpark agreement with in-situ observations of interplanetary CMEs (ICMEs) at L1, we use our estimates to show that Earth does not seem to be at risk of an extinction-level atmospheric erosion or stripping by the magnetic pressure of extreme solar eruptions, even way above a Carrington-type event. This does not seem to be the case with exoplanets, however, at least those orbiting in the classically defined habitability zones of magnetically active dwarf stars at orbital radii of a small fraction of 1 AU. We show that the combination of stellar ICMEs and the tidally locking zone of mother stars, that quite likely does not allow these exoplanets to attain Earth-like magnetic fields to shield themselves, probably render the existence of a proper atmosphere in them untenable. We propose, therefore, a critical revision of habitability criteria in these cases that would limit the number of target exoplanets considered as potential biosphere hosts.

Design of focused and restrained subsets from extremely large virtual libraries.

PubMed

Jamois, Eric A; Lin, Chien T; Waldman, Marvin

2003-11-01

With the current and ever-growing offering of reagents along with the vast palette of organic reactions, virtual libraries accessible to combinatorial chemists can reach sizes of billions of compounds or more. Extracting practical size subsets for experimentation has remained an essential step in the design of combinatorial libraries. A typical approach to computational library design involves enumeration of structures and properties for the entire virtual library, which may be unpractical for such large libraries. This study describes a new approach termed as on the fly optimization (OTFO) where descriptors are computed as needed within the subset optimization cycle and without intermediate enumeration of structures. Results reported herein highlight the advantages of coupling an ultra-fast descriptor calculation engine to subset optimization capabilities. We also show that enumeration of properties for the entire virtual library may not only be unpractical but also wasteful. Successful design of focused and restrained subsets can be achieved while sampling only a small fraction of the virtual library. We also investigate the stability of the method and compare results obtained from simulated annealing (SA) and genetic algorithms (GA).

H2-rich fluids from serpentinization: Geochemical and biotic implications

PubMed Central

Sleep, N. H.; Meibom, A.; Fridriksson, Th.; Coleman, R. G.; Bird, D. K.

2004-01-01

Metamorphic hydration and oxidation of ultramafic rocks produces serpentinites, composed of serpentine group minerals and varying amounts of brucite, magnetite, and/or FeNi alloys. These minerals buffer metamorphic fluids to extremely reducing conditions that are capable of producing hydrogen gas. Awaruite, FeNi3, forms early in this process when the serpentinite minerals are Fe-rich. Olivine with the current mantle Fe/Mg ratio was oxidized during serpentinization after the Moon-forming impact. This process formed some of the ferric iron in the Earth's mantle. For the rest of Earth's history, serpentinites covered only a small fraction of the Earth's surface but were an important prebiotic and biotic environment. Extant methanogens react H2 with CO2 to form methane. This is a likely habitable environment on large silicate planets. The catalytic properties of FeNi3 allow complex organic compounds to form within serpentinite and, when mixed with atmospherically produced complex organic matter and waters that circulated through basalts, constitutes an attractive prebiotic substrate. Conversely, inorganic catalysis of methane by FeNi3 competes with nascent and extant life. PMID:15326313

Metagenomic analysis of size-fractionated picoplankton in a marine oxygen minimum zone

PubMed Central

Ganesh, Sangita; Parris, Darren J; DeLong, Edward F; Stewart, Frank J

2014-01-01

Marine oxygen minimum zones (OMZs) support diverse microbial communities with roles in major elemental cycles. It is unclear how the taxonomic composition and metabolism of OMZ microorganisms vary between particle-associated and free-living size fractions. We used amplicon (16S rRNA gene) and shotgun metagenome sequencing to compare microbial communities from large (>1.6 μm) and small (0.2–1.6 μm) filter size fractions along a depth gradient in the OMZ off Chile. Despite steep vertical redox gradients, size fraction was a significantly stronger predictor of community composition compared to depth. Phylogenetic diversity showed contrasting patterns, decreasing towards the anoxic OMZ core in the small size fraction, but exhibiting maximal values at these depths within the larger size fraction. Fraction-specific distributions were evident for key OMZ taxa, including anammox planctomycetes, whose coding sequences were enriched up to threefold in the 0.2–1.6 μm community. Functional gene composition also differed between fractions, with the >1.6 μm community significantly enriched in genes mediating social interactions, including motility, adhesion, cell-to-cell transfer, antibiotic resistance and mobile element activity. Prokaryotic transposase genes were three to six fold more abundant in this fraction, comprising up to 2% of protein-coding sequences, suggesting that particle surfaces may act as hotbeds for transposition-based genome changes in marine microbes. Genes for nitric and nitrous oxide reduction were also more abundant (three to seven fold) in the larger size fraction, suggesting microniche partitioning of key denitrification steps. These results highlight an important role for surface attachment in shaping community metabolic potential and genome content in OMZ microorganisms. PMID:24030599

Metagenomic analysis of size-fractionated picoplankton in a marine oxygen minimum zone.

PubMed

Ganesh, Sangita; Parris, Darren J; DeLong, Edward F; Stewart, Frank J

2014-01-01

Marine oxygen minimum zones (OMZs) support diverse microbial communities with roles in major elemental cycles. It is unclear how the taxonomic composition and metabolism of OMZ microorganisms vary between particle-associated and free-living size fractions. We used amplicon (16S rRNA gene) and shotgun metagenome sequencing to compare microbial communities from large (>1.6 μm) and small (0.2-1.6 μm) filter size fractions along a depth gradient in the OMZ off Chile. Despite steep vertical redox gradients, size fraction was a significantly stronger predictor of community composition compared to depth. Phylogenetic diversity showed contrasting patterns, decreasing towards the anoxic OMZ core in the small size fraction, but exhibiting maximal values at these depths within the larger size fraction. Fraction-specific distributions were evident for key OMZ taxa, including anammox planctomycetes, whose coding sequences were enriched up to threefold in the 0.2-1.6 μm community. Functional gene composition also differed between fractions, with the >1.6 μm community significantly enriched in genes mediating social interactions, including motility, adhesion, cell-to-cell transfer, antibiotic resistance and mobile element activity. Prokaryotic transposase genes were three to six fold more abundant in this fraction, comprising up to 2% of protein-coding sequences, suggesting that particle surfaces may act as hotbeds for transposition-based genome changes in marine microbes. Genes for nitric and nitrous oxide reduction were also more abundant (three to seven fold) in the larger size fraction, suggesting microniche partitioning of key denitrification steps. These results highlight an important role for surface attachment in shaping community metabolic potential and genome content in OMZ microorganisms.

Extreme 13C depletions in seawater-derived brines and their implications for the past geochemical carbon cycle

NASA Astrophysics Data System (ADS)

Lazar, Boaz; Erez, Jonathan

1990-12-01

Extreme depletions in the 13C content of the total dissolved inorganic carbon (CT) were found in brines overlying microbial mat communities. Total alkalinity (AT) and CT in the brines suggest that intense photosynthetic activity of the microbial mat communities depletes the CT from the brine. We suggest that this depletion drives a large, kinetic, negative fractionation of carbon isotopes similar to that observed in highly alkaline solutions. In brines of extreme salinity where microbial mat communities no longer exist, the 13C content of the CT increases, probably because photosynthesis no longer dominates the gas-exchange processes. This mechanism explains light carbon-isotope compositions of carbonate rocks from evaporitic sections and bears on the interpretation of δ13C values in bedded stromatolitic limestones that are ca. 3.5 b.y. old.

Mesosiderite clasts with the most extreme positive europium anomalies among solar system rocks

NASA Technical Reports Server (NTRS)

Mittlefehldt, David W.; Rubin, Alan E.; Davis, Andrew M.

1992-01-01

Pigeonite-plagioclase gabbros that occur as clasts in mesosiderites (brecciated stony-iron meteorites) show extreme fractionations of the rare-earth elements (REEs) with larger positive europium anomalies than any previously known for igneous rocks from the earth, moon, or meteorite parent bodies and greater depletions of light REEs relative to heavy REEs than known for comparable cumulate gabbros. The REE pattern for merrillite in one of these clasts is depleted in light REEs and has a large positive europium anomaly as a result of metamorphic equilibration with the silicates. The extreme REE ratios exhibited by the mesosiderite clasts demonstrate that multistage igneous processes must have occurred on some asteroids in the early solar system. Melting of the crust by large-scale impacts or electrical induction from an early T-Tauri-phase sun may be responsible for these processes.

UPLC-MS-ELSD-PDA as a powerful dereplication tool to facilitate compound identification from small-molecule natural product libraries.

PubMed

Yang, Jin; Liang, Qian; Wang, Mei; Jeffries, Cynthia; Smithson, David; Tu, Ying; Boulos, Nidal; Jacob, Melissa R; Shelat, Anang A; Wu, Yunshan; Ravu, Ranga Rao; Gilbertson, Richard; Avery, Mitchell A; Khan, Ikhlas A; Walker, Larry A; Guy, R Kiplin; Li, Xing-Cong

2014-04-25

The generation of natural product libraries containing column fractions, each with only a few small molecules, using a high-throughput, automated fractionation system, has made it possible to implement an improved dereplication strategy for selection and prioritization of leads in a natural product discovery program. Analysis of databased UPLC-MS-ELSD-PDA information of three leads from a biological screen employing the ependymoma cell line EphB2-EPD generated details on the possible structures of active compounds present. The procedure allows the rapid identification of known compounds and guides the isolation of unknown compounds of interest. Three previously known flavanone-type compounds, homoeriodictyol (1), hesperetin (2), and sterubin (3), were identified in a selected fraction derived from the leaves of Eriodictyon angustifolium. The lignan compound deoxypodophyllotoxin (8) was confirmed to be an active constituent in two lead fractions derived from the bark and leaves of Thuja occidentalis. In addition, two new but inactive labdane-type diterpenoids with an uncommon triol side chain were also identified as coexisting with deoxypodophyllotoxin in a lead fraction from the bark of T. occidentalis. Both diterpenoids were isolated in acetylated form, and their structures were determined as 14S,15-diacetoxy-13R-hydroxylabd-8(17)-en-19-oic acid (9) and 14R,15-diacetoxy-13S-hydroxylabd-8(17)-en-19-oic acid (10), respectively, by spectroscopic data interpretation and X-ray crystallography. This work demonstrates that a UPLC-MS-ELSD-PDA database produced during fractionation may be used as a powerful dereplication tool to facilitate compound identification from chromatographically tractable small-molecule natural product libraries.

Extreme Hafnium Values in Archean Banded Iron Formations: Evidence for Sedimentary Lu/Hf Fractionation at 3.2 Ga or Diagenesis?

NASA Astrophysics Data System (ADS)

Foster, I. S.; Agranier, A.; Heubeck, C. E.; Köhler, I.; Homann, M.; Tripati, A. K.; Nonnotte, P.; Ponzevera, E.; Lalonde, S.

2017-12-01

The emergence of continental crust above sea level in the early Precambrian would have created the first terrestrial habitats, and initiated atmosphere-driven weathering of the continents, yet the history of continental emergence is largely unknown[1]. Precambrian chemical sediments, specifically Banded Iron Formation (BIF), appear to have sampled the Hf-Nd isotope composition of ancient seawater, and may preserve a historical record of the emergence of the continental landmass[2] via Lu/Hf fractionation induced by subaerial differential weathering[3,4]. However, paired Hf-Nd isotope data are available for only one BIF to date, indicating appreciable emerged continental landmass ca. 2.7 Ga[2]. Our work extends this record back into the Eo- and Meso-Archean using samples of 3.8 Ga BIF from Isua, Greenland, and 3.2 Ga BIF from the Moodies Group, S. Africa. Isua samples appear to have been altered by amphibolite-grade metamorphism, however Moodies Group samples appear primary, having experienced significantly lower metamorphic grades. Moodies samples appear to retain their primary seawater signatures, however, their range of ˜Hf(i) values, from -54.6 to +40.7, is among the most extreme ever reported. Such extreme values may be indicative of one of several possibilities: unusual and intense sedimentary Lu/Hf fractionation during the Mesoarchean relative to today, sampling of a continuum of compositions from two sources with distinct Hf-compositions, or the result of early diagenetic processes occurring soon after the deposition of the Moodies Group BIF. These results suggest that interpretation of ˜Hf and ˜Nd data from BIF is not as straightforward as previously suggested[2], and positive ˜Hf values are not necessarily indicative of emerged continental crust. [1] Flament et al. (2013), Precambrian Research, 229, 177-188. [2] Veihmann et al. (2014), Geology, 42, 115-118. [3] Bayon et al. (2006), Geology, 34, 433-436. [4] Vervoort et al. (2011), Geochimica et Cosmochimica Acta, 75, 5903-5926.

Estimating the probability that the sample mean is within a desired fraction of the standard deviation of the true mean.

PubMed

Schillaci, Michael A; Schillaci, Mario E

2009-02-01

The use of small sample sizes in human and primate evolutionary research is commonplace. Estimating how well small samples represent the underlying population, however, is not commonplace. Because the accuracy of determinations of taxonomy, phylogeny, and evolutionary process are dependant upon how well the study sample represents the population of interest, characterizing the uncertainty, or potential error, associated with analyses of small sample sizes is essential. We present a method for estimating the probability that the sample mean is within a desired fraction of the standard deviation of the true mean using small (n<10) or very small (n < or = 5) sample sizes. This method can be used by researchers to determine post hoc the probability that their sample is a meaningful approximation of the population parameter. We tested the method using a large craniometric data set commonly used by researchers in the field. Given our results, we suggest that sample estimates of the population mean can be reasonable and meaningful even when based on small, and perhaps even very small, sample sizes.

Soil organic matter composition affected by potato cropping managements

USDA-ARS?s Scientific Manuscript database

Organic matter is a small but important soil component. As a heterogeneous mixture of geomolecules and biomolecules, soil organic matter (SOM) can be fractionated into distinct pools with different solubility and lability. Water extractable organic matter (WEOM) fraction is the most labile and mobil...

The balance and harmony of control power for a combat aircraft in tactical maneuvering

NASA Technical Reports Server (NTRS)

Bocvarov, Spiro; Cliff, Eugene M.; Lutze, Frederick H.

1992-01-01

An analysis is presented for a family of regular extremal attitude-maneuvers for the High Angle-of-Attack Research Vehicle that has thrust-vectoring capability. Different levels of dynamic coupling are identified in the combat aircraft attitude model, and the characteristic extremal-family motion is explained. It is shown why the extremal-family trajectories develop small sideslip-angles, a highly desirable feature from a practical viewpoint.

Structural characterization of casein micelles: shape changes during film formation.

PubMed

Gebhardt, R; Vendrely, C; Kulozik, U

2011-11-09

The objective of this study was to determine the effect of size-fractionation by centrifugation on the film structure of casein micelles. Fractionated casein micelles in solution were asymmetrically distributed with a small distribution width as measured by dynamic light scattering. Films prepared from the size-fractionated samples showed a smooth surface in optical microscopy images and a homogeneous microstructure in atomic force micrographs. The nano- and microstructure of casein films was probed by micro-beam grazing incidence small angle x-ray scattering (μGISAXS). Compared to the solution measurements, the sizes determined in the film were larger and broadly distributed. The measured GISAXS patterns clearly deviate from those simulated for a sphere and suggest a deformation of the casein micelles in the film. © 2011 IOP Publishing Ltd

Nitrogen dioxide in exhaust emissions from motor vehicles

NASA Astrophysics Data System (ADS)

Lenner, Magnus

NO 2/NO x (v/v) fractions and NO 2 exhaust emission rates were determined for diesel- and gasoline-powered passenger cars and a diesel truck, at several conditions of constant engine load and speed. Vehicles with various kinds of emission control equipment were investigated. Also, integrations of NO 2/NO x percentages during Federal Test Procedure driving cycles were made for six types of passenger car. High (> 30 %) NO 2 fractions were measured for gasoline cars with air injection, and for diesel vehicles. A gasoline car with a 3-way catalyst had low NO x totals with small (< 1 %) NO 2 fractions. A passenger diesel with particle trap yielded surprisingly small (0-2%) NO 2 fractions at moderate speeds. The results have implications for NO 2 concentration in the atmosphere of northern cities during wintertime inversions, in view of the increasing use of air injection systems for passenger cars to meet legal restrictions on vehicle emissions of hydrocarbons and CO.

GATE Simulations of Small Animal SPECT for Determination of Scatter Fraction as a Function of Object Size

NASA Astrophysics Data System (ADS)

Konik, Arda; Madsen, Mark T.; Sunderland, John J.

2012-10-01

In human emission tomography, combined PET/CT and SPECT/CT cameras provide accurate attenuation maps for sophisticated scatter and attenuation corrections. Having proven their potential, these scanners are being adapted for small animal imaging using similar correction approaches. However, attenuation and scatter effects in small animal imaging are substantially less than in human imaging. Hence, the value of sophisticated corrections is not obvious for small animal imaging considering the additional cost and complexity of these methods. In this study, using GATE Monte Carlo package, we simulated the Inveon small animal SPECT (single pinhole collimator) scanner to find the scatter fractions of various sizes of the NEMA-mouse (diameter: 2-5.5 cm , length: 7 cm), NEMA-rat (diameter: 3-5.5 cm, length: 15 cm) and MOBY (diameter: 2.1-5.5 cm, length: 3.5-9.1 cm) phantoms. The simulations were performed for three radionuclides commonly used in small animal SPECT studies:99mTc (140 keV), 111In (171 keV 90% and 245 keV 94%) and 125I (effective 27.5 keV). For the MOBY phantoms, the total Compton scatter fractions ranged (over the range of phantom sizes) from 4-10% for 99mTc (126-154 keV), 7-16% for 111In (154-188 keV), 3-7% for 111In (220-270 keV) and 17-30% for 125I (15-45 keV) including the scatter contributions from the tungsten collimator, lead shield and air (inside and outside the camera heads). For the NEMA-rat phantoms, the scatter fractions ranged from 10-15% (99mTc), 17-23% 111In: 154-188 keV), 8-12% (111In: 220-270 keV) and 32-40% (125I). Our results suggest that energy window methods based on solely emission data are sufficient for all mouse and most rat studies for 99mTc and 111In. However, more sophisticated methods may be needed for 125I.

Improving Ramsey spectroscopy in the extreme-ultraviolet region with a random-sampling approach

DOE Office of Scientific and Technical Information (OSTI.GOV)

Eramo, R.; Bellini, M.; European Laboratory for Non-linear Spectroscopy

2011-04-15

Ramsey-like techniques, based on the coherent excitation of a sample by delayed and phase-correlated pulses, are promising tools for high-precision spectroscopic tests of QED in the extreme-ultraviolet (xuv) spectral region, but currently suffer experimental limitations related to long acquisition times and critical stability issues. Here we propose a random subsampling approach to Ramsey spectroscopy that, by allowing experimentalists to reach a given spectral resolution goal in a fraction of the usual acquisition time, leads to substantial improvements in high-resolution spectroscopy and may open the way to a widespread application of Ramsey-like techniques to precision measurements in the xuv spectral region.

Extremozymes from Marine Actinobacteria.

PubMed

Suriya, J; Bharathiraja, S; Krishnan, M; Manivasagan, P; Kim, S-K

Marine microorganisms that have the possibility to survive in diverse conditions such as extreme temperature, pH, pressure, and salinity are known as extremophiles. They produce biocatalysts so named as extremozymes that are active and stable at extreme conditions. These enzymes have numerous industrial applications due to its distinct properties. Till now, only a fraction of microorganisms on Earth have been exploited for screening of extremozymes. Novel techniques used for the cultivation and production of extremophiles, as well as cloning and overexpression of their genes in various expression systems, will pave the way to use these enzymes for chemical, food, pharmaceutical, and other industrial applications. © 2016 Elsevier Inc. All rights reserved.

Predictors of High-grade Esophagitis After Definitive Three-dimensional Conformal Therapy, Intensity-modulated Radiation Therapy, or Proton Beam Therapy for Non-small cell Lung Cancer

DOE Office of Scientific and Technical Information (OSTI.GOV)

Gomez, Daniel R., E-mail: dgomez@mdanderson.org; Tucker, Susan L.; Martel, Mary K.

2012-11-15

Introduction: We analyzed the ability of various patient- and treatment-related factors to predict radiation-induced esophagitis (RE) in patients with non-small cell lung cancer (NSCLC) treated with three-dimensional conformal radiation therapy (3D-CRT), intensity-modulated radiation therapy (IMRT), or proton beam therapy (PBT). Methods and Materials: Patients were treated for NSCLC with 3D-CRT, IMRT, or PBT at MD Anderson from 2000 to 2008 and had full dose-volume histogram (DVH) data available. The endpoint was severe (grade {>=}3) RE. The Lyman-Kutcher-Burman (LKB) model was used to analyze RE as a function of the fractional esophageal DVH, with clinical variables included as dose-modifying factors. Results:more » Overall, 652 patients were included: 405 patients were treated with 3D-CRT, 139 with IMRT, and 108 with PBT; corresponding rates of grade {>=}3 RE were 8%, 28%, and 6%, respectively, with a median time to onset of 42 days (range, 11-93 days). A fit of the fractional DVH LKB model demonstrated that the fractional effective dose was significantly different (P=.046) than 1 (fractional mean dose) indicating that high doses to small volumes are more predictive than mean esophageal dose. The model fit was better for 3D-CRT and PBT than for IMRT. Including receipt of concurrent chemotherapy as a dose-modifying factor significantly improved the LKB model (P=.005), and the model was further improved by including a variable representing treatment with >30 fractions. Examining individual types of chemotherapy agents revealed a trend toward receipt of concurrent taxanes and increased risk of RE (P=.105). Conclusions: Fractional dose (dose rate) and number of fractions (total dose) distinctly affect the risk of severe RE, estimated using the LKB model, and concurrent chemotherapy improves the model fit. This risk of severe RE is underestimated by this model in patients receiving IMRT.« less

Predictors of high-grade esophagitis after definitive three-dimensional conformal therapy, intensity-modulated radiation therapy, or proton beam therapy for non-small cell lung cancer.

PubMed

Gomez, Daniel R; Tucker, Susan L; Martel, Mary K; Mohan, Radhe; Balter, Peter A; Lopez Guerra, Jose Luis; Liu, Hongmei; Komaki, Ritsuko; Cox, James D; Liao, Zhongxing

2012-11-15

We analyzed the ability of various patient- and treatment-related factors to predict radiation-induced esophagitis (RE) in patients with non-small cell lung cancer (NSCLC) treated with three-dimensional conformal radiation therapy (3D-CRT), intensity-modulated radiation therapy (IMRT), or proton beam therapy (PBT). Patients were treated for NSCLC with 3D-CRT, IMRT, or PBT at MD Anderson from 2000 to 2008 and had full dose-volume histogram (DVH) data available. The endpoint was severe (grade≥3) RE. The Lyman-Kutcher-Burman (LKB) model was used to analyze RE as a function of the fractional esophageal DVH, with clinical variables included as dose-modifying factors. Overall, 652 patients were included: 405 patients were treated with 3D-CRT, 139 with IMRT, and 108 with PBT; corresponding rates of grade≥3 RE were 8%, 28%, and 6%, respectively, with a median time to onset of 42 days (range, 11-93 days). A fit of the fractional DVH LKB model demonstrated that the fractional effective dose was significantly different (P=.046) than 1 (fractional mean dose) indicating that high doses to small volumes are more predictive than mean esophageal dose. The model fit was better for 3D-CRT and PBT than for IMRT. Including receipt of concurrent chemotherapy as a dose-modifying factor significantly improved the LKB model (P=.005), and the model was further improved by including a variable representing treatment with >30 fractions. Examining individual types of chemotherapy agents revealed a trend toward receipt of concurrent taxanes and increased risk of RE (P=.105). Fractional dose (dose rate) and number of fractions (total dose) distinctly affect the risk of severe RE, estimated using the LKB model, and concurrent chemotherapy improves the model fit. This risk of severe RE is underestimated by this model in patients receiving IMRT. Copyright © 2012 Elsevier Inc. All rights reserved.

Susceptibility to Mortality in Weather Extremes: Effect Modification by Personal and Small Area Characteristics In a Multi-City Case-Only Analysis

PubMed Central

Zanobetti, Antonella; O’Neill, Marie S.; Gronlund, Carina J.; Schwartz, Joel D

2015-01-01

Background Extremes of temperature have been associated with short-term increases in daily mortality. We identified subpopulations with increased susceptibility to dying during temperature extremes, based on personal demographics, small-area characteristics and preexisting medical conditions. Methods We examined Medicare participants in 135 U.S. cities and identified preexisting conditions based on hospitalization records prior to their deaths, from 1985–2006. Personal characteristics were obtained from the Medicare records, and area characteristics were assigned based on zip-code of residence. We conducted a case-only analysis of over 11 million deaths, and evaluated modification of the risk of dying associated with extremely hot days and extremely cold days, continuous temperatures, and water-vapor pressure. Modifiers included preexisting conditions, personal characteristics, zip-code-level population characteristics, and land-cover characteristics. For each effect modifier, a city-specific logistic regression model was fitted and then an overall national estimate was calculated using meta-analysis. Results People with certain preexisting conditions were more susceptible to extreme heat, with an additional 6% (95% confidence interval= 4% – 8%) increase in the risk of dying on an extremely hot day in subjects with previous admission for atrial fibrillation, an additional 8% (4%–12%) in subjects with Alzheimer disease, and an additional 6% (3%–9%) in subjects with dementia. Zip-code level and personal characteristics were also associated with increased susceptibility to temperature. Conclusions We identified several subgroups of the population who are particularly susceptible to temperature extremes, including persons with atrial fibrillation. PMID:24045717

Iron-Virus Interactions in the Oceans

NASA Astrophysics Data System (ADS)

Bonnain, C. C.; Buck, K. N.; Breitbart, M.

2016-02-01

Iron is an essential nutrient in the oceans, with the sub-nanomolar concentrations found in open ocean surface waters often insufficient for supporting biological activity. More than 99.9% of dissolved iron is bound to organic ligands, yet identifying the sources of these ligands in seawater remains a major challenge. A significant portion of iron-binding ligands fall into the colloidal fraction, which is operationally defined as the fraction collected between a 0.02 µm and a 0.45 µm filter. Among the organic ligands in this fraction persists an extremely abundant biological candidate: viruses. On average there are 107 viruses per milliliter of seawater, most of which are phages (viruses that infect bacteria). The impact of viruses on ocean biogeochemistry is often evoked purely through the act of lysing hosts and very few studies have considered the geochemical potential of the viral particles themselves. Recent work in non-marine model systems has revealed the presence of iron atoms within the structure of diverse phages infecting Escherichia coli. Combined with the small size and sheer abundance of phages in the oceans, the inclusion of iron in phage structures would translate into a major factor for cycling of this important trace metal. In addition, iron is so critical for growth that bacteria have evolved multiple uptake systems for assimilating iron, such as siderophores. Certain outer membrane proteins serve a dual function in siderophore uptake and as a phage receptor, suggesting that some of the strategies utilized for iron acquisition make bacteria vulnerable to phage infection. Given the constant arms race between bacteria and phages to develop resistance and counter-resistance, respectively, it is not surprising that phage would have evolved to utilize critical regions of surface-exposed proteins which are indispensable for bacterial growth as receptors. The research presented here explores the potential of marine phages to serve as iron-binding ligands and discusses the implications for both trace metal biogeochemistry and marine phage-host interactions.

Ultra-soft magnetic properties and correlated phase analysis by {sup 57}Fe Mössbauer spectroscopy of Fe{sub 74}Cu{sub 0.8}Nb{sub 2.7}Si{sub 15.5}B{sub 7} alloy

DOE Office of Scientific and Technical Information (OSTI.GOV)

Manjura Hoque, S.; Liba, S. I.; Akhter, Shireen

2016-02-15

A detailed study of magnetic softness has been performed on FINEMENT type of ribbons by investigating the BH loop with maximum applied field of 960 A/m. The ribbon with the composition of Fe{sub 74}Cu{sub 0.8}Nb{sub 2.7}Si{sub 15.5}B{sub 7} was synthesized by rapid solidification technique and the compositions volume fraction was controlled by changing the annealing condition. Detail phase analysis was performed through X-ray diffraction (XRD), Differential scanning calorimetry (DSC), Vibrating sample magnetometer (VSM) and Mössbauer spectroscopy in order to correlate the ultrasoft magnetic properties with the volume fraction of amorphous and α-Fe(Si) soft nano composites. Bright (BF) and dark fieldmore » (DF) image with selective area diffraction (SAD) patterns by the transmission electron microscopy (TEM) of the sample annealed for the optimized annealed condition at 853 K for 3 min reveals nanocrystals with an average size between 10-15 nm possessing the bcc structure which matches with the grain size revealed by the X-ray diffraction. Kinetics of crystallization of α-Fe(Si) phases has been determined by DSC curves. Extremely small coercivity of 30.9 A/m and core loss of 2.5 W/Kg for the sample annealed at 853 K for 3 min was found. Similar values for other crystalline conditions were determined by using BH loop tracer with a maximum applied field of around 960 A/m. Mössbauer spectroscopy was used to determine chemical shift, hyperfine field distribution (HFD), and peak width of different phases. The volume fractions of the relative amount of amorphous and crystalline phases are also determined by Mössbauer spectroscopy. High saturation magnetization along with ultrasoft magnetic properties exhibits very high potentials technological applications.« less

Ultra-soft magnetic properties and correlated phase analysis by 57Fe Mössbauer spectroscopy of Fe74Cu0.8Nb2.7Si15.5B7 alloy

NASA Astrophysics Data System (ADS)

Manjura Hoque, S.; Liba, S. I.; Anirban, A.; Choudhury, Shamima; Akhter, Shireen

2016-02-01

A detailed study of magnetic softness has been performed on FINEMENT type of ribbons by investigating the BH loop with maximum applied field of 960 A/m. The ribbon with the composition of Fe74Cu0.8Nb2.7Si15.5B7 was synthesized by rapid solidification technique and the compositions volume fraction was controlled by changing the annealing condition. Detail phase analysis was performed through X-ray diffraction (XRD), Differential scanning calorimetry (DSC), Vibrating sample magnetometer (VSM) and Mössbauer spectroscopy in order to correlate the ultrasoft magnetic properties with the volume fraction of amorphous and α-Fe(Si) soft nano composites. Bright (BF) and dark field (DF) image with selective area diffraction (SAD) patterns by the transmission electron microscopy (TEM) of the sample annealed for the optimized annealed condition at 853 K for 3 min reveals nanocrystals with an average size between 10-15 nm possessing the bcc structure which matches with the grain size revealed by the X-ray diffraction. Kinetics of crystallization of α-Fe(Si) phases has been determined by DSC curves. Extremely small coercivity of 30.9 A/m and core loss of 2.5 W/Kg for the sample annealed at 853 K for 3 min was found. Similar values for other crystalline conditions were determined by using BH loop tracer with a maximum applied field of around 960 A/m. Mössbauer spectroscopy was used to determine chemical shift, hyperfine field distribution (HFD), and peak width of different phases. The volume fractions of the relative amount of amorphous and crystalline phases are also determined by Mössbauer spectroscopy. High saturation magnetization along with ultrasoft magnetic properties exhibits very high potentials technological applications.

Distribution of metals in various particle-size fractions in topsoils of a small dry valley system (European Russia, forest zone)

NASA Astrophysics Data System (ADS)

Samonova, Olga; Aseyeva, Elena

2017-04-01

A detailed study of heavy metals distribution in various soil grain-size fractions helps to increase the knowledge about the complex nature of metals' occurrence and their distribution pathways in the environment. On the basis of particle size fractionation of topsoil horizons we examined the specific behavior of heavy metals in a small erosional landform located in the humid temperate zone of the Russian Plain. The object of the study is a 400 m small U-shaped dry valley (balka in Russian) with a catchment area of 32.8 ha located in the central part of the Protva river basin, 100 km southwest of Moscow. The uppermost parts of the landform are incised in Late Pleistocene loessial loams, which cover significant portions of interfluve area in the region, while the middle and the lower parts cut through Middle Pleistocene glacial sediments. A total of 50 samples were collected from topsoil horizons of different landform geomorphic units along three cross-sections as well as along the bottom of the landform and its detrital fan. Samples were analyzed for Mn, Cu, Ni, Co, Cr, Zn, Pb, Ti, Zr, and Fe content. Eleven samples were chosen for physical fractionation into 5 grain-size fractions (1-0.25 mm, 0.25-0.05 mm, 0.05-0.01 mm, 0.01-0.001 mm and <0.001 mm) and further analysis for fractionized metal contents. Across the grain-size fractions the maximum Zr content was observed in the coarse silt fraction and Ti - in the medium and fine silt fraction, while other metals, such as Fe, Mn, Co, Ni, Cr, Pb, and Zn revealed their highest concentrations in the clay fraction. For Fe, Mn, Co and Ni a second concentration peak was observed in the coarse and medium sand fraction. Due to probably eolian genesis and (or) transformation during weathering, the coarse silt fraction in comparison to other fractions showed a depletion of the majority of metals while the minimum concentrations of Ti, Zr and Cr were limited to the coarse and medium sand. Statistical analysis showed that the variation of metal contents depends on particle sizes: the Cv coefficients calculated for Cu, Ni, Co, Fe, Mn, Ti and Zr reach their maximum in the 1-0.25 mm fraction (for Cu and Ni exceeding 75%, for Ti, Zr being around 40%). For Zn, Cr and Pb the maximum variation (50-60%) was found in the 0.25-0.05 mm fraction. In contrast, the two studied silt fractions and also the clay showed very low variations of all metal contents (except for Mn) characteristically in the range between 6% (Cr) and 23.5% (Zn). Unlike the finer fractions, which displayed very poor geochemical differentiation across the landform's geomorphic units, the coarser (sand) fractions showed distinct spatial patterns in the elements' distribution, possibly related to migration processes, the depletion of metals in the landforms' slopes and their prevalent enrichment in the bottom unit is observed.

Crystal fractionation in the SNC meteorites: Implications for sample selection

NASA Technical Reports Server (NTRS)

Treiman, Allan H.

1988-01-01

Almost all rock types in the SNC meteorites are cumulates, products of magma differentiation by crystal fractionation (addition or removal of crystals). If the SNC meteorites are from the surface of Mars or near subsurface, then most of the igneous units on Mars are differentiated. Basaltic units probably experienced minor to moderate differientation, but ultrabasic units probably experienced extreme differentiation. Products of this differentiation may include Fe-rich gabbro, pyroxenite, periodotite (and thus serpentine), and possibly massive sulfides. The SNC meteorites include ten lithologies (three in EETA79001), eight of which are crystal cumulates. The other lithologies, EETA79001 A and B are subophitic basalts.

Angular distributions and polarization fractions of helium resonance radiation (n 1P - 1 1S) in the extreme ultraviolet

NASA Technical Reports Server (NTRS)

Mumma, M. J.; Misakian, M.; Jackson, W. M.; Faris, J. L.

1973-01-01

Angular intensity distributions of helium (n 1P - 1 1S) resonance photons with respect to the exciting electron beam are presented. The angular intensity distributions were measured at selected electron impact energies from 25 eV (near threshold) to 150 eV. Polarization fractions (Pi) were obtained by analyzing the data in terms of the theoretical relation between angular intensity distribution and Pi, i.e. Iota (theta) = Iota (90) (1 - Pi sq cos theta). The experimental values for Pi are compared with recent theoretical results and with previous experimental values for the (3 1P - 2 1S) transition.

Atmospheric rivers and the mass mortality of wild oysters: insight into an extreme future?

PubMed Central

Chang, Andrew L.; Deck, Anna; Ferner, Matthew C.

2016-01-01

Climate change is predicted to increase the frequency and severity of extreme events. However, the biological consequences of extremes remain poorly resolved owing to their unpredictable nature and difficulty in quantifying their mechanisms and impacts. One key feature delivering precipitation extremes is an atmospheric river (AR), a long and narrow filament of enhanced water vapour transport. Despite recent attention, the biological impacts of ARs remain undocumented. Here, we use biological data coupled with remotely sensed and in situ environmental data to describe the role of ARs in the near 100% mass mortality of wild oysters in northern San Francisco Bay. In March 2011, a series of ARs made landfall within California, contributing an estimated 69.3% of the precipitation within the watershed and driving an extreme freshwater discharge into San Francisco Bay. This discharge caused sustained low salinities (less than 6.3) that almost perfectly matched the known oyster critical salinity tolerance and was coincident with a mass mortality of one of the most abundant populations throughout this species' range. This is a concern, because wild oysters remain a fraction of their historical abundance and have yet to recover. This study highlights a novel mechanism by which precipitation extremes may affect natural systems and the persistence of sensitive species in the face of environmental change. PMID:27974516

Extreme events and event size fluctuations in biased random walks on networks.

PubMed

Kishore, Vimal; Santhanam, M S; Amritkar, R E

2012-05-01

Random walk on discrete lattice models is important to understand various types of transport processes. The extreme events, defined as exceedences of the flux of walkers above a prescribed threshold, have been studied recently in the context of complex networks. This was motivated by the occurrence of rare events such as traffic jams, floods, and power blackouts which take place on networks. In this work, we study extreme events in a generalized random walk model in which the walk is preferentially biased by the network topology. The walkers preferentially choose to hop toward the hubs or small degree nodes. In this setting, we show that extremely large fluctuations in event sizes are possible on small degree nodes when the walkers are biased toward the hubs. In particular, we obtain the distribution of event sizes on the network. Further, the probability for the occurrence of extreme events on any node in the network depends on its "generalized strength," a measure of the ability of a node to attract walkers. The generalized strength is a function of the degree of the node and that of its nearest neighbors. We obtain analytical and simulation results for the probability of occurrence of extreme events on the nodes of a network using a generalized random walk model. The result reveals that the nodes with a larger value of generalized strength, on average, display lower probability for the occurrence of extreme events compared to the nodes with lower values of generalized strength.

Methyl bromide: ocean sources, ocean sinks, and climate sensitivity

NASA Technical Reports Server (NTRS)

Anbar, A. D.; Yung, Y. L.; Chavez, F. P.

1996-01-01

The oceans play an important role in the geochemical cycle of methyl bromide (CH3Br), the major carrier of O3-destroying bromine to the stratosphere. The quantity of CH3Br produced annually in seawater is comparable to the amount entering the atmosphere each year from natural and anthropogenic sources. The production mechanism is unknown but may be biological. Most of this CH3Br is consumed in situ by hydrolysis or reaction with chloride. The size of the fraction which escapes to the atmosphere is poorly constrained; measurements in seawater and the atmosphere have been used to justify both a large oceanic CH3Br flux to the atmosphere and a small net ocean sink. Since the consumption reactions are extremely temperature-sensitive, small temperature variations have large effects on the CH3Br concentration in seawater, and therefore on the exchange between the atmosphere and the ocean. The net CH3Br flux is also sensitive to variations in the rate of CH3Br production. We have quantified these effects using a simple steady state mass balance model. When CH3Br production rates are linearly scaled with seawater chlorophyll content, this model reproduces the latitudinal variations in marine CH3Br concentrations observed in the east Pacific Ocean by Singh et al. [1983] and by Lobert et al. [1995]. The apparent correlation of CH3Br production with primary production explains the discrepancies between the two observational studies, strengthening recent suggestions that the open ocean is a small net sink for atmospheric CH3Br, rather than a large net source. The Southern Ocean is implicated as a possible large net source of CH3Br to the atmosphere. Since our model indicates that both the direction and magnitude of CH3Br exchange between the atmosphere and ocean are extremely sensitive to temperature and marine productivity, and since the rate of CH3Br production in the oceans is comparable to the rate at which this compound is introduced to the atmosphere, even small perturbations to temperature or productivity can modify atmospheric CH3Br. Therefore atmospheric CH3Br should be sensitive to climate conditions. Our modeling indicates that climate-induced CH3Br variations can be larger than those resulting from small (+/- 25%) changes in the anthropogenic source, assuming that this source comprises less than half of all inputs. Future measurements of marine CH3Br, temperature, and primary production should be combined with such models to determine the relationship between marine biological activity and CH3Br production. Better understanding of the biological term is especially important to assess the importance of non-anthropogenic sources to stratospheric ozone loss and the sensitivity of these sources to global climate change.

Methyl bromide: ocean sources, ocean sinks, and climate sensitivity.

PubMed

Anbar, A D; Yung, Y L; Chavez, F P

1996-03-01

The oceans play an important role in the geochemical cycle of methyl bromide (CH3Br), the major carrier of O3-destroying bromine to the stratosphere. The quantity of CH3Br produced annually in seawater is comparable to the amount entering the atmosphere each year from natural and anthropogenic sources. The production mechanism is unknown but may be biological. Most of this CH3Br is consumed in situ by hydrolysis or reaction with chloride. The size of the fraction which escapes to the atmosphere is poorly constrained; measurements in seawater and the atmosphere have been used to justify both a large oceanic CH3Br flux to the atmosphere and a small net ocean sink. Since the consumption reactions are extremely temperature-sensitive, small temperature variations have large effects on the CH3Br concentration in seawater, and therefore on the exchange between the atmosphere and the ocean. The net CH3Br flux is also sensitive to variations in the rate of CH3Br production. We have quantified these effects using a simple steady state mass balance model. When CH3Br production rates are linearly scaled with seawater chlorophyll content, this model reproduces the latitudinal variations in marine CH3Br concentrations observed in the east Pacific Ocean by Singh et al. [1983] and by Lobert et al. [1995]. The apparent correlation of CH3Br production with primary production explains the discrepancies between the two observational studies, strengthening recent suggestions that the open ocean is a small net sink for atmospheric CH3Br, rather than a large net source. The Southern Ocean is implicated as a possible large net source of CH3Br to the atmosphere. Since our model indicates that both the direction and magnitude of CH3Br exchange between the atmosphere and ocean are extremely sensitive to temperature and marine productivity, and since the rate of CH3Br production in the oceans is comparable to the rate at which this compound is introduced to the atmosphere, even small perturbations to temperature or productivity can modify atmospheric CH3Br. Therefore atmospheric CH3Br should be sensitive to climate conditions. Our modeling indicates that climate-induced CH3Br variations can be larger than those resulting from small (+/- 25%) changes in the anthropogenic source, assuming that this source comprises less than half of all inputs. Future measurements of marine CH3Br, temperature, and primary production should be combined with such models to determine the relationship between marine biological activity and CH3Br production. Better understanding of the biological term is especially important to assess the importance of non-anthropogenic sources to stratospheric ozone loss and the sensitivity of these sources to global climate change.

On the formation age of the first planetary system

NASA Astrophysics Data System (ADS)

Hara, T.; Kunitomo, S.; Shigeyasu, M.; Kajiura, D.

2008-05-01

Recently, it has been observed the extreme metal-poor stars in the Galactic halo, which must be formed just after Pop III objects. On the other hand, the first gas clouds of mass 106 M are supposed to be formed at z 10, 20, and 30 for the 1σ, 2σ and 3σ, where the density perturbations are assumed of the standard ΛCDM cosmology. Usually it is approximated that the distribution of the density perturbation amplitudes is gaussian where σ means the standard deviation. If we could apply this gaussian distribution to the extreme small probability, the gas clouds would be formed at z 40, 60, and 80 for the 4σ, 6σ, and 8σ where the probabilities are approximately 3 × 10-5, 10-9, and 10-15. Within our universe, there are almost 1016 ( 1022M/106M) clouds of mass 106M. Then the first gas clouds must be formed around z 80, where the time is 20 Myr ( 13.7/(1 + z)3/2 Gyr). Even within our galaxy, there are 105 ( 1011M/106M) clouds, then the first gas clouds within our galaxy must be formed around z 40, where the time is 54 Myr ( 13.7/(1+z)3/2Gyr). The evolution time for massive star ( 102 M) is 3 Myr and the explosion of the massive supernova distributes the metal within a cloud. The damping time of the supernova shock wave in the adiabatic and isothermal era is several Myr and stars of the second generation (Pop II) are formed within a free fall time 20 Myr. Even if the gas cloud is metal poor, there is a lot of possibility to form the planets around such stars. The first planetary systems could be formed within 6 × 107 years after the Big Bang in the universe. Even in our galaxies, the first planetary systems could be formed within 1.7 × 108 years. If the abundance of heavy elements such as Fe is small compared to the elements of C, N, O, the planets must be the one where the rock fraction is small. It is interesting to wait the observations of planets around metal-poor stars. For the panspermia theory, the origin of life could be expected in such systems.

Methodological Considerations in Estimation of Phenotype Heritability Using Genome-Wide SNP Data, Illustrated by an Analysis of the Heritability of Height in a Large Sample of African Ancestry Adults

PubMed Central

Chen, Fang; He, Jing; Zhang, Jianqi; Chen, Gary K.; Thomas, Venetta; Ambrosone, Christine B.; Bandera, Elisa V.; Berndt, Sonja I.; Bernstein, Leslie; Blot, William J.; Cai, Qiuyin; Carpten, John; Casey, Graham; Chanock, Stephen J.; Cheng, Iona; Chu, Lisa; Deming, Sandra L.; Driver, W. Ryan; Goodman, Phyllis; Hayes, Richard B.; Hennis, Anselm J. M.; Hsing, Ann W.; Hu, Jennifer J.; Ingles, Sue A.; John, Esther M.; Kittles, Rick A.; Kolb, Suzanne; Leske, M. Cristina; Monroe, Kristine R.; Murphy, Adam; Nemesure, Barbara; Neslund-Dudas, Christine; Nyante, Sarah; Ostrander, Elaine A; Press, Michael F.; Rodriguez-Gil, Jorge L.; Rybicki, Ben A.; Schumacher, Fredrick; Stanford, Janet L.; Signorello, Lisa B.; Strom, Sara S.; Stevens, Victoria; Van Den Berg, David; Wang, Zhaoming; Witte, John S.; Wu, Suh-Yuh; Yamamura, Yuko; Zheng, Wei; Ziegler, Regina G.; Stram, Alexander H.; Kolonel, Laurence N.; Marchand, Loïc Le; Henderson, Brian E.; Haiman, Christopher A.; Stram, Daniel O.

2015-01-01

Height has an extremely polygenic pattern of inheritance. Genome-wide association studies (GWAS) have revealed hundreds of common variants that are associated with human height at genome-wide levels of significance. However, only a small fraction of phenotypic variation can be explained by the aggregate of these common variants. In a large study of African-American men and women (n = 14,419), we genotyped and analyzed 966,578 autosomal SNPs across the entire genome using a linear mixed model variance components approach implemented in the program GCTA (Yang et al Nat Genet 2010), and estimated an additive heritability of 44.7% (se: 3.7%) for this phenotype in a sample of evidently unrelated individuals. While this estimated value is similar to that given by Yang et al in their analyses, we remain concerned about two related issues: (1) whether in the complete absence of hidden relatedness, variance components methods have adequate power to estimate heritability when a very large number of SNPs are used in the analysis; and (2) whether estimation of heritability may be biased, in real studies, by low levels of residual hidden relatedness. We addressed the first question in a semi-analytic fashion by directly simulating the distribution of the score statistic for a test of zero heritability with and without low levels of relatedness. The second question was addressed by a very careful comparison of the behavior of estimated heritability for both observed (self-reported) height and simulated phenotypes compared to imputation R2 as a function of the number of SNPs used in the analysis. These simulations help to address the important question about whether today's GWAS SNPs will remain useful for imputing causal variants that are discovered using very large sample sizes in future studies of height, or whether the causal variants themselves will need to be genotyped de novo in order to build a prediction model that ultimately captures a large fraction of the variability of height, and by implication other complex phenotypes. Our overall conclusions are that when study sizes are quite large (5,000 or so) the additive heritability estimate for height is not apparently biased upwards using the linear mixed model; however there is evidence in our simulation that a very large number of causal variants (many thousands) each with very small effect on phenotypic variance will need to be discovered to fill the gap between the heritability explained by known versus unknown causal variants. We conclude that today's GWAS data will remain useful in the future for causal variant prediction, but that finding the causal variants that need to be predicted may be extremely laborious. PMID:26125186

Methodological Considerations in Estimation of Phenotype Heritability Using Genome-Wide SNP Data, Illustrated by an Analysis of the Heritability of Height in a Large Sample of African Ancestry Adults.

PubMed

Chen, Fang; He, Jing; Zhang, Jianqi; Chen, Gary K; Thomas, Venetta; Ambrosone, Christine B; Bandera, Elisa V; Berndt, Sonja I; Bernstein, Leslie; Blot, William J; Cai, Qiuyin; Carpten, John; Casey, Graham; Chanock, Stephen J; Cheng, Iona; Chu, Lisa; Deming, Sandra L; Driver, W Ryan; Goodman, Phyllis; Hayes, Richard B; Hennis, Anselm J M; Hsing, Ann W; Hu, Jennifer J; Ingles, Sue A; John, Esther M; Kittles, Rick A; Kolb, Suzanne; Leske, M Cristina; Millikan, Robert C; Monroe, Kristine R; Murphy, Adam; Nemesure, Barbara; Neslund-Dudas, Christine; Nyante, Sarah; Ostrander, Elaine A; Press, Michael F; Rodriguez-Gil, Jorge L; Rybicki, Ben A; Schumacher, Fredrick; Stanford, Janet L; Signorello, Lisa B; Strom, Sara S; Stevens, Victoria; Van Den Berg, David; Wang, Zhaoming; Witte, John S; Wu, Suh-Yuh; Yamamura, Yuko; Zheng, Wei; Ziegler, Regina G; Stram, Alexander H; Kolonel, Laurence N; Le Marchand, Loïc; Henderson, Brian E; Haiman, Christopher A; Stram, Daniel O

2015-01-01

Height has an extremely polygenic pattern of inheritance. Genome-wide association studies (GWAS) have revealed hundreds of common variants that are associated with human height at genome-wide levels of significance. However, only a small fraction of phenotypic variation can be explained by the aggregate of these common variants. In a large study of African-American men and women (n = 14,419), we genotyped and analyzed 966,578 autosomal SNPs across the entire genome using a linear mixed model variance components approach implemented in the program GCTA (Yang et al Nat Genet 2010), and estimated an additive heritability of 44.7% (se: 3.7%) for this phenotype in a sample of evidently unrelated individuals. While this estimated value is similar to that given by Yang et al in their analyses, we remain concerned about two related issues: (1) whether in the complete absence of hidden relatedness, variance components methods have adequate power to estimate heritability when a very large number of SNPs are used in the analysis; and (2) whether estimation of heritability may be biased, in real studies, by low levels of residual hidden relatedness. We addressed the first question in a semi-analytic fashion by directly simulating the distribution of the score statistic for a test of zero heritability with and without low levels of relatedness. The second question was addressed by a very careful comparison of the behavior of estimated heritability for both observed (self-reported) height and simulated phenotypes compared to imputation R2 as a function of the number of SNPs used in the analysis. These simulations help to address the important question about whether today's GWAS SNPs will remain useful for imputing causal variants that are discovered using very large sample sizes in future studies of height, or whether the causal variants themselves will need to be genotyped de novo in order to build a prediction model that ultimately captures a large fraction of the variability of height, and by implication other complex phenotypes. Our overall conclusions are that when study sizes are quite large (5,000 or so) the additive heritability estimate for height is not apparently biased upwards using the linear mixed model; however there is evidence in our simulation that a very large number of causal variants (many thousands) each with very small effect on phenotypic variance will need to be discovered to fill the gap between the heritability explained by known versus unknown causal variants. We conclude that today's GWAS data will remain useful in the future for causal variant prediction, but that finding the causal variants that need to be predicted may be extremely laborious.

Analysis of extreme rainfall events using attributes control charts in temporal rainfall processes

NASA Astrophysics Data System (ADS)

Villeta, María; Valencia, Jose Luis; Saá-Requejo, Antonio; María Tarquis, Ana

2015-04-01

The impacts of most intense rainfall events on agriculture and insurance industry can be very severe. This research focuses in the analysis of extreme rainfall events throughout the use of attributes control charts, which constitutes a usual tool in Statistical Process Control (SPC) but unusual in climate studios. Here, series of daily precipitations for the years 1931-2009 within a Spanish region are analyzed, based on a new type of attributes control chart that takes into account the autocorrelation between the extreme rainfall events. The aim is to conclude if there exist or not evidence of a change in the extreme rainfall model of the considered series. After adjusting seasonally the precipitation series and considering the data of the first 30 years, a frequency-based criterion allowed fixing specification limits in order to discriminate between extreme observed rainfall days and normal observed rainfall days. The autocorrelation amongst maximum precipitation is taken into account by a New Binomial Markov Extended Process obtained for each rainfall series. These modelling of the extreme rainfall processes provide a way to generate the attributes control charts for the annual fraction of rainfall extreme days. The extreme rainfall processes along the rest of the years under study can then be monitored by such attributes control charts. The results of the application of this methodology show evidence of change in the model of extreme rainfall events in some of the analyzed precipitation series. This suggests that the attributes control charts proposed for the analysis of the most intense precipitation events will be of practical interest to agriculture and insurance sectors in next future.

Wealth distribution of simple exchange models coupled with extremal dynamics

NASA Astrophysics Data System (ADS)

Bagatella-Flores, N.; Rodríguez-Achach, M.; Coronel-Brizio, H. F.; Hernández-Montoya, A. R.

2015-01-01

Punctuated Equilibrium (PE) states that after long periods of evolutionary quiescence, species evolution can take place in short time intervals, where sudden differentiation makes new species emerge and some species extinct. In this paper, we introduce and study the effect of punctuated equilibrium on two different asset exchange models: the yard sale model (YS, winner gets a random fraction of a poorer player's wealth) and the theft and fraud model (TF, winner gets a random fraction of the loser's wealth). The resulting wealth distribution is characterized using the Gini index. In order to do this, we consider PE as a perturbation with probability ρ of being applied. We compare the resulting values of the Gini index at different increasing values of ρ in both models. We found that in the case of the TF model, the Gini index reduces as the perturbation ρ increases, not showing dependence with the agents number. While for YS we observe a phase transition which happens around ρc = 0.79. For perturbations ρ <ρc the Gini index reaches the value of one as time increases (an extreme wealth condensation state), whereas for perturbations greater than or equal to ρc the Gini index becomes different to one, avoiding the system reaches this extreme state. We show that both simple exchange models coupled with PE dynamics give more realistic results. In particular for YS, we observe a power low decay of wealth distribution.

Active galaxies observed during the Extreme Ultraviolet Explorer all-sky survey

NASA Technical Reports Server (NTRS)

Marshall, H. L.; Fruscione, A.; Carone, T. E.

1995-01-01

We present observations of active galactic nuclei (AGNs) obtained with the Extreme Ultraviolet Explorer (EUVE) during the all-sky survey. A total of 13 sources were detected at a significance of 2.5 sigma or better: seven Seyfert galaxies, five BL Lac objects, and one quasar. The fraction of BL Lac objects is higher in our sample than in hard X-ray surveys but is consistent with the soft X-ray Einstein Slew Survey, indicating that the main reason for the large number of BL Lac objects in the extreme ulktraviolet (EUV) and soft X-ray bands is their steeper X-ray spectra. We show that the number of AGNs observed in both the EUVE and ROSAT Wide Field Camera surveys can readily be explained by modelling the EUV spectra with a simple power law in the case of BL Lac objects and with an additional EUV excess in the case of Seyferts and quasars. Allowing for cold matter absorption in Seyfert galaxy hosts drive up the inferred average continuum slope to 2.0 +/- 0.5 (at 90% confidence), compared to a slope of 1.0 usually found from soft X-ray data. If Seyfert galaxies without EUV excesses form a significant fraction of the population, then the average spectrum of those with bumps should be even steeper. We place a conservative limit on neutral gas in BL Lac objects: N(sub H) less than 10(exp 20)/sq cm.

Application of probabilistic event attribution in the summer heat extremes in the western US to emissions traced to major industrial carbon producers

NASA Astrophysics Data System (ADS)

Mera, R. J.; Allen, M. R.; Mote, P.; Ekwurzel, B.; Frumhoff, P. C.; Rupp, D. E.

2015-12-01

Heat waves in the western US have become progressively more severe due to increasing relative humidity and nighttime temperatures, increasing the health risks of vulnerable portions of the population, including Latino farmworkers in California's Central Valley and other socioeconomically disadvantaged communities. Recent research has shown greenhouse gas emissions doubled the risk of the hottest summer days during the 2000's in the Central Valley, increasing public health risks and costs, and raising the question of which parties are responsible for paying these costs. It has been argued that these costs should not be taken up solely by the general public through taxation, but that additional parties can be considered, including multinational corporations who have extracted and marketed a large proportion of carbon-based fuels. Here, we apply probabilistic event attribution (PEA) to assess the contribution of emissions traced to the world's 90 largest major industrial carbon producers to the severity and frequency of these extreme heat events. Our research uses very large ensembles of regional climate model simulations to calculate fractional attribution of policy-relevant extreme heat variables. We compare a full forcings world with observed greenhouse gases, sea surface temperatures and sea ice extent to a counter-factual world devoid of carbon pollution from major industrial carbon producers. The results show a discernable fraction of record-setting summer temperatures in the western US during the 2000's can be attributed to emissions sourced from major carbon producers.

Aspect-dependent soil saturation and insight into debris-flow initiation during extreme rainfall in the Colorado Front Range

USGS Publications Warehouse

Ebel, Brian A.; Rengers, Francis K.; Tucker, Gregory E.

2015-01-01

Hydrologic processes during extreme rainfall events are poorly characterized because of the rarity of measurements. Improved understanding of hydrologic controls on natural hazards is needed because of the potential for substantial risk during extreme precipitation events. We present field measurements of the degree of soil saturation and estimates of available soil-water storage during the September 2013 Colorado extreme rainfall event at burned (wildfire in 2010) and unburned hillslopes with north- and south-facing slope aspects. Soil saturation was more strongly correlated with slope aspect than with recent fire history; south-facing hillslopes became fully saturated while north-facing hillslopes did not. Our results suggest multiple explanations for why aspect-dependent hydrologic controls favor saturation development on south-facing slopes, causing reductions in effective stress and triggering of slope failures during extreme rainfall. Aspect-dependent hydrologic behavior may result from (1) a larger gravel and stone fraction, and hence lower soil-water storage capacity, on south-facing slopes, and (2) lower weathered-bedrock permeability on south-facing slopes, because of lower tree density and associated deep roots penetrating bedrock as well as less intense weathering, inhibiting soil drainage.

So Small, So Loud: Extremely High Sound Pressure Level from a Pygmy Aquatic Insect (Corixidae, Micronectinae)

PubMed Central

Sueur, Jérôme; Mackie, David; Windmill, James F. C.

2011-01-01

To communicate at long range, animals have to produce intense but intelligible signals. This task might be difficult to achieve due to mechanical constraints, in particular relating to body size. Whilst the acoustic behaviour of large marine and terrestrial animals has been thoroughly studied, very little is known about the sound produced by small arthropods living in freshwater habitats. Here we analyse for the first time the calling song produced by the male of a small insect, the water boatman Micronecta scholtzi. The song is made of three distinct parts differing in their temporal and amplitude parameters, but not in their frequency content. Sound is produced at 78.9 (63.6–82.2) SPL rms re 2.10−5 Pa with a peak at 99.2 (85.7–104.6) SPL re 2.10−5 Pa estimated at a distance of one metre. This energy output is significant considering the small size of the insect. When scaled to body length and compared to 227 other acoustic species, the acoustic energy produced by M. scholtzi appears as an extreme value, outperforming marine and terrestrial mammal vocalisations. Such an extreme display may be interpreted as an exaggerated secondary sexual trait resulting from a runaway sexual selection without predation pressure. PMID:21698252

So small, so loud: extremely high sound pressure level from a pygmy aquatic insect (Corixidae, Micronectinae).

PubMed

Sueur, Jérôme; Mackie, David; Windmill, James F C

2011-01-01

To communicate at long range, animals have to produce intense but intelligible signals. This task might be difficult to achieve due to mechanical constraints, in particular relating to body size. Whilst the acoustic behaviour of large marine and terrestrial animals has been thoroughly studied, very little is known about the sound produced by small arthropods living in freshwater habitats. Here we analyse for the first time the calling song produced by the male of a small insect, the water boatman Micronecta scholtzi. The song is made of three distinct parts differing in their temporal and amplitude parameters, but not in their frequency content. Sound is produced at 78.9 (63.6-82.2) SPL rms re 2.10(-5) Pa with a peak at 99.2 (85.7-104.6) SPL re 2.10(-5) Pa estimated at a distance of one metre. This energy output is significant considering the small size of the insect. When scaled to body length and compared to 227 other acoustic species, the acoustic energy produced by M. scholtzi appears as an extreme value, outperforming marine and terrestrial mammal vocalisations. Such an extreme display may be interpreted as an exaggerated secondary sexual trait resulting from a runaway sexual selection without predation pressure.

Habitable planets with high obliquities

NASA Technical Reports Server (NTRS)

Williams, D. M.; Kasting, J. F.

1997-01-01

Earth's obliquity would vary chaotically from 0 degrees to 85 degrees were it not for the presence of the Moon (J. Laskar, F. Joutel, and P. Robutel, 1993, Nature 361, 615-617). The Moon itself is thought to be an accident of accretion, formed by a glancing blow from a Mars-sized planetesimal. Hence, planets with similar moons and stable obliquities may be extremely rare. This has lead Laskar and colleagues to suggest that the number of Earth-like planets with high obliquities and temperate, life-supporting climates may be small. To test this proposition, we have used an energy-balance climate model to simulate Earth's climate at obliquities up to 90 degrees. We show that Earth's climate would become regionally severe in such circumstances, with large seasonal cycles and accompanying temperature extremes on middle- and high-latitude continents which might be damaging to many forms of life. The response of other, hypothetical, Earth-like planets to large obliquity fluctuations depends on their land-sea distribution and on their position within the habitable zone (HZ) around their star. Planets with several modest-sized continents or equatorial supercontinents are more climatically stable than those with polar supercontinents. Planets farther out in the HZ are less affected by high obliquities because their atmospheres should accumulate CO2 in response to the carbonate-silicate cycle. Dense, CO2-rich atmospheres transport heat very effectively and therefore limit the magnitude of both seasonal cycles and latitudinal temperature gradients. We conclude that a significant fraction of extrasolar Earth-like planets may still be habitable, even if they are subject to large obliquity fluctuations.

Unusual void galaxy DDO 68: implications of the HST-resolved photometry

NASA Astrophysics Data System (ADS)

Makarov, D. I.; Makarova, L. N.; Pustilnik, S. A.; Borisov, S. B.

2017-04-01

DDO 68 (UGC 5340) is an unusual dwarf galaxy with extremely low gas metallicity [12 + log (O/H) = 7.14] residing in the nearby Lynx-Cancer void. Despite its apparent isolation, it shows both optical and H I morphological evidence for strong tidal disturbance. Here, we study the resolved stellar populations of DDO 68 using deep images from the HST archive. We determined a distance of 12.75 ± 0.41 Mpc using the tip of the red giant branch (TRGB). The star formation history reconstruction reveals that about 60 per cent of stars formed during the initial period of star formation, about 12-14 Gyr ago. During the next 10 Gyr, DDO 68 was in the quenched state, with only slight traces of star formation. The onset of the most recent burst of star formation occurred about 300 Myr ago. We find that young populations with ages of several million to a few hundred million years are widely spread across various parts of DDO 68, indicating an intense star formation episode with a high mean rate of 0.15 M⊙ yr-1. A major fraction of the visible stars in the whole system (˜80 per cent) have low metallicities: Z = Z⊙/50-Z⊙/20. The properties of the northern periphery of DDO 68 can be explained by an ongoing burst of star formation induced by the minor merger of a small, gas-rich, extremely metal-poor galaxy with a more typical dwarf galaxy. The current TRGB-based distance of DDO 68 implies a total negative peculiar velocity of ≈500 km s-1.

Fractionally charged skyrmions in fractional quantum Hall effect

PubMed Central

Balram, Ajit C.; Wurstbauer, U.; Wójs, A.; Pinczuk, A.; Jain, J. K.

2015-01-01

The fractional quantum Hall effect has inspired searches for exotic emergent topological particles, such as fractionally charged excitations, composite fermions, abelian and nonabelian anyons and Majorana fermions. Fractionally charged skyrmions, which support both topological charge and topological vortex-like spin structure, have also been predicted to occur in the vicinity of 1/3 filling of the lowest Landau level. The fractional skyrmions, however, are anticipated to be exceedingly fragile, suppressed by very small Zeeman energies. Here we show that, slightly away from 1/3 filling, the smallest manifestations of the fractional skyrmion exist in the excitation spectrum for a broad range of Zeeman energies, and appear in resonant inelastic light scattering experiments as well-defined resonances slightly below the long wavelength spin wave mode. The spectroscopy of these exotic bound states serves as a sensitive tool for investigating the residual interaction between composite fermions, responsible for delicate new fractional quantum Hall states in this filling factor region. PMID:26608906

Effects of long-term grassland management on the carbon and nitrogen pools of different soil aggregate fractions.

PubMed

Egan, Gary; Crawley, Michael J; Fornara, Dario A

2018-02-01

Common grassland management practices include animal grazing and the repeated addition of lime and nutrient fertilizers to soils. These practices can greatly influence the size and distribution of different soil aggregate fractions, thus altering the cycling and storage of carbon (C) and nitrogen (N) in grassland soils. So far, very few studies have simultaneously addressed the potential long-term effect that multiple management practices might have on soil physical aggregation. Here we specifically ask whether and how grazing, liming and nutrient fertilization might influence C and N content (%) as well as C and N pools of different soil aggregate fractions in a long-term grassland experiment established in 1991 at Silwood Park, Berkshire, UK. We found that repeated liming applications over 23years significantly decreased the C pool (i.e. gCKg -1 soil) of Large Macro Aggregate (LMA>2mm) fractions and increased C pools within three smaller soil aggregate fractions: Small Macro Aggregate (SMA, 250μm-2mm), Micro Aggregate (MiA, 53-250μm), and Silt Clay Aggregate (SCA<53μm). Soil C (and N) accrual in smaller fractions was mainly caused by positive liming effects on aggregate fraction mass rather than on changes in soil C (and N) content (%). Liming effects could be explained by increases in soil pH, as this factor was significantly positively related to greater soil C and N pools of smaller aggregate fractions. Long-term grazing and inorganic nutrient fertilization had much weaker effects on both soil aggregate-fraction mass and on soil C and N concentrations, however, our evidence is that these practices could also contribute to greater C and N pools of smaller soil fractions. Overall our study demonstrates how agricultural liming can contribute to increase C pools of small (more stable) soil fractions with potential significant benefits for the long-term C balance of human-managed grassland soils. Copyright © 2017 Elsevier B.V. All rights reserved.

Green Space and Deaths Attributable to the Urban Heat Island Effect in Ho Chi Minh City.

PubMed

Dang, Tran Ngoc; Van, Doan Quang; Kusaka, Hiroyuki; Seposo, Xerxes T; Honda, Yasushi

2018-04-01

To quantify heat-related deaths in Ho Chi Minh City, Vietnam, caused by the urban heat island (UHI) and explore factors that may alleviate the impact of UHIs. We estimated district-specific meteorological conditions from 2010 to 2013 using the dynamic downscaling model and calculated the attributable fraction and number of mortalities resulting from the total, extreme, and mild heat in each district. The difference in attributable fraction of total heat between the central and outer districts was classified as the attributable fraction resulting from the UHI. The association among attributable fraction, attributable number with a green space, population density, and budget revenue of each district was then explored. The temperature-mortality relationship between the central and outer areas was almost identical. The attributable fraction resulting from the UHI was 0.42%, which was contributed by the difference in temperature distribution between the 2 areas. Every 1-square-kilometer increase in green space per 1000 people can prevent 7.4 deaths caused by heat. Green space can alleviate the impacts of UHIs, although future studies conducting a heath economic evaluation of tree planting are warranted.

Green Space and Deaths Attributable to the Urban Heat Island Effect in Ho Chi Minh City

PubMed Central

Van, Doan Quang; Kusaka, Hiroyuki; Seposo, Xerxes T.; Honda, Yasushi

2018-01-01

Objectives. To quantify heat-related deaths in Ho Chi Minh City, Vietnam, caused by the urban heat island (UHI) and explore factors that may alleviate the impact of UHIs. Methods. We estimated district-specific meteorological conditions from 2010 to 2013 using the dynamic downscaling model and calculated the attributable fraction and number of mortalities resulting from the total, extreme, and mild heat in each district. The difference in attributable fraction of total heat between the central and outer districts was classified as the attributable fraction resulting from the UHI. The association among attributable fraction, attributable number with a green space, population density, and budget revenue of each district was then explored. Results. The temperature–mortality relationship between the central and outer areas was almost identical. The attributable fraction resulting from the UHI was 0.42%, which was contributed by the difference in temperature distribution between the 2 areas. Every 1-square-kilometer increase in green space per 1000 people can prevent 7.4 deaths caused by heat. Conclusions. Green space can alleviate the impacts of UHIs, although future studies conducting a heath economic evaluation of tree planting are warranted. PMID:29072938

ALH85085: a unique volatile-poor carbonaceous chondrite with possible implications for nebular fractionation processes

USGS Publications Warehouse

Grossman, J.N.; Rubin, A.E.; MacPherson, G.J.

1988-01-01

Allan Hills 85085 is a unique chondrite with affinities to the Al Rais-Renazzo clan of carbonaceous chondrites. Its constituents are less than 50 ??m in mean size. Chondrules and microchondrules of all textures are present; nonporphyritic chondrules are unusually abundant. The mean compositions of porphyritic, nonporphyritic and barred olivine chondrules resemble those in ordinary chondrites except that they are depleted in volatile elements. Ca-, Al-rich inclusions are abundant and largely free of nebular alteration; they comprise types similar to those in CM and CO chondrites, as well as unique types. Calcium dialuminate occurs in several inclusions. Metal, silicate and sulfide compositions are close to those in CM-CO chondrites and Al Rais and Renazzo. C1-chondrite clasts and metal-rich "reduced" clasts are present, but opaque matrix is absent. Siderophile abundances in ALH85085 are extremely high (e.g., Fe Si = 1.7 ?? solar), and volatiles are depleted (e.g., Na Si = 0.25 ?? solar, S Si = 0.03 ?? solar). Nonvolatile lithophile abundances are similar to those in Al Rais, Renazzo, and CM and CO chondrites. ALH85085 agglomerated when temperatures in the nebula were near 1000 K, in the same region where Renazzo, Al Rais and the CI chondrites formed. Agglomeration of high-temperature material may thus be a mechanism by which the fractionation of refractory lithophiles occurred in the nebula. Chondrule formation must have occurred at high temperatures when clumps of precursors were small. After agglomeration, ALH85085 was annealed and lightly shocked. C1 and other clasts were subsequently incorporated during late-stage brecciation. ?? 1988.

Nerve membrane ion channels as the target site of environmental toxicants

DOE Office of Scientific and Technical Information (OSTI.GOV)

Narahashi, T.

1987-04-01

There are many environmentally important chemicals which exhibit potent effects on the nervous system. Since nerve excitation takes place in a fraction of a second, electrophysiological methods provide the authors with the most straightforward approach to the study of the mechanisms of action of environmental toxicants on the nervous system. Aquatic animals such as crayfish, lobster, squid, and marine snails represent extremely useful materials for such electrophysiological studies, because much of the authors knowledge of nerve excitation is derived from those animals. Nerve excitation takes place as a result of opening and closing of ion channels of the membrane. Thesemore » functions are independent of metabolic energy, and can be measured most effectively by voltage clamp techniques as applied to the giant axons of the crayfish and the squid. Patch clamp techniques developed during the past 10 years have added a new dimension to the electrophysiological investigation. These techniques allow them to measure the activity of individual ion channels, thereby making it possible to analyze the interaction of toxic molecules directly with single ion channels. Examples are given summarizing electrophysiological studies of environmental neurotoxicants. The abdominal nerve cords and neuromuscular preparations isolated from the crayfish are convenient materials for bioassay of certain environmental toxicants such as pyrethroids, chlorinated hydrocarbons, and other insecticides. Only a small fraction of the flux through the sodium channel, less than 1%, must be modified by pyrethroids for the animal to develop symptoms of poisoning. Such a toxicological application from channel to animal is important is understanding the potent toxic effect.« less

{sup 90}Y -PET imaging: Exploring limitations and accuracy under conditions of low counts and high random fraction

DOE Office of Scientific and Technical Information (OSTI.GOV)

Carlier, Thomas, E-mail: thomas.carlier@chu-nantes.fr; Willowson, Kathy P.; Fourkal, Eugene

Purpose: {sup 90}Y -positron emission tomography (PET) imaging is becoming a recognized modality for postinfusion quantitative assessment following radioembolization therapy. However, the extremely low counts and high random fraction associated with {sup 90}Y -PET may significantly impair both qualitative and quantitative results. The aim of this work was to study image quality and noise level in relation to the quantification and bias performance of two types of Siemens PET scanners when imaging {sup 90}Y and to compare experimental results with clinical data from two types of commercially available {sup 90}Y microspheres. Methods: Data were acquired on both Siemens Biograph TruePointmore » [non-time-of-flight (TOF)] and Biograph microcomputed tomography (mCT) (TOF) PET/CT scanners. The study was conducted in three phases. The first aimed to assess quantification and bias for different reconstruction methods according to random fraction and number of true counts in the scan. The NEMA 1994 PET phantom was filled with water with one cylindrical insert left empty (air) and the other filled with a solution of {sup 90}Y . The phantom was scanned for 60 min in the PET/CT scanner every one or two days. The second phase used the NEMA 2001 PET phantom to derive noise and image quality metrics. The spheres and the background were filled with a {sup 90}Y solution in an 8:1 contrast ratio and four 30 min acquisitions were performed over a one week period. Finally, 32 patient data (8 treated with Therasphere{sup ®} and 24 with SIR-Spheres{sup ®}) were retrospectively reconstructed and activity in the whole field of view and the liver was compared to theoretical injected activity. Results: The contribution of both bremsstrahlung and LSO trues was found to be negligible, allowing data to be decay corrected to obtain correct quantification. In general, the recovered activity for all reconstruction methods was stable over the range studied, with a small bias appearing at extremely high random fraction and low counts for iterative algorithms. Point spread function (PSF) correction and TOF reconstruction in general reduce background variability and noise and increase recovered concentration. Results for patient data indicated a good correlation between the expected and PET reconstructed activities. A linear relationship between the expected and the measured activities in the organ of interest was observed for all reconstruction method used: a linearity coefficient of 0.89 ± 0.05 for the Biograph mCT and 0.81 ± 0.05 for the Biograph TruePoint. Conclusions: Due to the low counts and high random fraction, accurate image quantification of {sup 90}Y during selective internal radionuclide therapy is affected by random coincidence estimation, scatter correction, and any positivity constraint of the algorithm. Nevertheless, phantom and patient studies showed that the impact of number of true and random coincidences on quantitative results was found to be limited as long as ordinary Poisson ordered subsets expectation maximization reconstruction algorithms with random smoothing are used. Adding PSF correction and TOF information to the reconstruction greatly improves the image quality in terms of bias, variability, noise reduction, and detectability. On the patient studies, the total activity in the field of view is in general accurately measured by Biograph mCT and slightly overestimated by the Biograph TruePoint.« less

Identification and quantitation of morphological cell types in electrophoretically separated human embryonic kidney cell cultures

NASA Technical Reports Server (NTRS)

Williams, K. B.; Kunze, M. E.; Todd, P. W.

1985-01-01

Four major cell types were identified by phase microscopy in early passage human embryonic kidney cell cultures. They are small and large epithelioid, domed, and fenestrated cells. Fibroblasts are also present in some explants. The percent of each cell type changes with passage number as any given culture grows. As a general rule, the fraction of small epithelioid cells increases, while the fraction of fenestrated cells, always small, decreases further. When fibroblasts are present, they always increase in percentage of the total cell population. Electrophoretic separation of early passage cells showed that the domed cells have the highest electrophoretic mobility, fibroblasts have an intermediate high mobility, small epithelioid cells have a low mobility, broadly distributed, and fenestrated cells have the lowest mobility. All cell types were broadly distributed among electrophoretic subfractions, which were never pure but only enriched with respect to a given cell type.

Extreme-value statistics of fractional Brownian motion bridges.

PubMed

Delorme, Mathieu; Wiese, Kay Jörg

2016-11-01

Fractional Brownian motion is a self-affine, non-Markovian, and translationally invariant generalization of Brownian motion, depending on the Hurst exponent H. Here we investigate fractional Brownian motion where both the starting and the end point are zero, commonly referred to as bridge processes. Observables are the time t_{+} the process is positive, the maximum m it achieves, and the time t_{max} when this maximum is taken. Using a perturbative expansion around Brownian motion (H=1/2), we give the first-order result for the probability distribution of these three variables and the joint distribution of m and t_{max}. Our analytical results are tested and found to be in excellent agreement, with extensive numerical simulations for both H>1/2 and H<1/2. This precision is achieved by sampling processes with a free end point and then converting each realization to a bridge process, in generalization to what is usually done for Brownian motion.

Monitoring BTEX degradation by CSIA - chances and challenges

NASA Astrophysics Data System (ADS)

Vogt, Carsten; Dorer, Conrad; Kümmel, Steffen; Bombach, Petra; Fischer, Anko; Richnow, Hans Hermann

2014-05-01

Monitoring is crucial for evaluating the success of any geobiotechnological applications. Compound- specific stable isotope analysis (CSIA) has emerged as a key method for monitoring biogeochemical transformation processes. Isotope compositions of residual reactants may change during the first rate-limiting step in (bio)chemical reactions; measurement of these changes are the basis for CSIA. Caused by differences in the activation energy, light isotopologues often react slightly faster than heavy isotopologues, resulting in enrichment of heavy isotopes at the reactive site in the substrate or of light isotopes in the product. This is termed isotope fractionation. Upon multi-dimensional CSIA (2D-CSIA, 3D-CSIA), the isotope fractionation of two or more different elements within a molecule is determined, allowing highly resolved analyses of degradation processes as masking effects typically occurring in one-dimensional CSIA are cancelled. In the last years, 2D-CSIA making use of the ratio of stable carbon to hydrogen isotopes (13C/12C, 2H/1H), turned out to be an important tool for elucidating the environmental biodegradation pattern of BTEX compounds which are global notorious contaminants. This presentation aims to summarize the current knowledge on 2D-CSIA of BTEX, to point out the prospects and to indicate future perspectives upon monitoring in the field. Degradation experiments for determining carbon and hydrogen isotope fractionation factors were carried out using several pure and mixed cultures performing different BTEX-activating reactions. Various anaerobic key reactions showed pronounced hydrogen isotope fractionation: (i) fumarate addition to the methyl moiety of toluene, xylene isomers and probably ethylbenzene catalyzed by benzylsuccinate synthases, (ii) anaerobic hydroxylation of the ethyl side chain of ethylbenzene catalyzed by ethylbenzene dehydrogenase, and (iii) anaerobic activation of benzene by yet unknown biochemical mechanisms. Due to the high hydrogen isotope fractionation, the ratios of hydrogen vs. carbon isotope fractionation in two-dimensional plots (lambda values, Λ) were generally higher than 10 (in extreme cases > 100). Upon aerobic activation reactions at the aromatic ring catalyzed by mono- or dioxygenases, usually Λ values smaller than 10 were observed due to small, absent or inverse hydrogen isotope fractionation. An exception is the aerobic monooxygenation of methyl or methylene moieties which is linked to large hydrogen and carbon isotope fractionation. Since Λ values are highly indicative for specific transformation reactions, 2D-CSIA has a great potential for evaluating biodegradation processes of BTEX in the environment. Moreover, reactions catalyzed by benzylsuccinate synthases showed partially variable Λ values, indicating slightly different reaction mechanisms of isoenzymes, probably permitting the detection of specific isoenzymes by 2D-CSIA in field applications. In contrast, ethylbenzene dehydrogenase of three tested organisms showed similar, very characteristic isotope fractionation pattern even under different redox conditions. The major goal of future investigations is to use 2D-CSIA at contaminated field sites for elucidating specific degradation pathways. Single data for benzene are promising, demonstrating e.g., anaerobic benzene degradation by 2D-CSIA at a highly contaminated site. Nevertheless, 2D-CSIA field data for BTEX are yet lacking and need to be surveyed for a proper evaluation of the 2D-CSIA concept for BTEX.

Thermoregulatory value of cracking-clay soil shelters for small vertebrates during extreme desert conditions.

PubMed

Waudby, Helen P; Petit, Sophie

2017-05-01

Deserts exhibit extreme climatic conditions. Small desert-dwelling vertebrates have physiological and behavioral adaptations to cope with these conditions, including the ability to seek shelter. We investigated the temperature (T) and relative humidity (RH) regulating properties of the soil cracks that characterize the extensive cracking-clay landscapes of arid Australia, and the extent of their use by 2 small marsupial species: fat-tailed and stripe-faced dunnarts (Sminthopsis crassicaudata and Sminthopsis macroura). We measured hourly (over 24-h periods) the T and RH of randomly-selected soil cracks compared to outside conditions, during 2 summers and 2 winters. We tracked 17 dunnarts (8 Sminthopsis crassicaudata and 9 Sminthopsis macroura) to quantify their use of cracks. Cracks consistently moderated microclimate, providing more stable conditions than available from non-crack points, which often displayed comparatively dramatic fluctuations in T and RH. Both dunnart species used crack shelters extensively. Cracks constitute important shelter for small animals during extreme conditions by providing a stable microclimate, which is typically cooler than outside conditions in summer and warmer in winter. Cracks likely play a fundamental sheltering role by sustaining the physiological needs of small mammal populations. Globally, cracking-clay areas are dominated by agricultural land uses, including livestock grazing. Management of these systems should focus not only on vegetation condition, but also on soil integrity, to maintain shelter resources for ground-dwelling fauna. © 2016 International Society of Zoological Sciences, Institute of Zoology/Chinese Academy of Sciences and John Wiley & Sons Australia, Ltd.

Experimental investigation on thermal conductivity and viscosity of maghemite (γ –Fe2O3) water-based nanofluids

NASA Astrophysics Data System (ADS)

Nurdin, I.; Johan, M. R.; Ang, B. C.

2018-03-01

Thermal conductivity and kinematic viscosity of maghemite nanofluids were experimentally investigated at a small volume fraction of maghemite nanoparticles and temperatures. Maghemite nanofluids were prepared by suspending maghemite nanoparticles in water as base fluids. Results show that the thermal conductivity of maghemite nanofluids linearly increase with increasing particle volume fraction and temperature, while kinematic viscosity increase with increasing particle volume fraction and decrease with increasing temperature. The highest enhancement of thermal conductivity and kinematic viscosity are 18.84% and 13.66% respectively, at particle volume fraction 0.6% and temperature 35.

Extreme Vertical Gusts in the Atmospheric Boundary Layer

DTIC Science & Technology

2015-07-01

significant effect on the statistics of the rare, extreme gusts. In the lowest 5,000 ft, boundary layer effects make small to moderate vertical...4 2.4 Effects of Gust Shape ............................................................................................... 5... Definitions Adiabatic Lapse Rate The rate of change of temperature with altitude that would occur if a parcel of air was transported sufficiently

Mechanisms for creating accommodation space during early Tertiary sedimentation in Tibet.

NASA Astrophysics Data System (ADS)

Studnicki-Gizbert, C.; Burchfiel, B. C.

2003-12-01

The Tibetan plateau is for the most part underlain by rocks of pre-Cenozoic age, a fact that has hindered the identification of Cenozoic shortening structures that can be unequivocally related to the effects of India-Asia collision. Notably, however, the Qiangtang block contains a number of small, short wavelength basins filled with terrestrial sediments of early Tertiary age. Where these basins have been well studied, sedimentation is recognized as having occurred coevally with compressional deformation. The classic treatment of compressional basins appeals to accommodation space created by the flexure of an elastic plate in response to loads created by adjacent thrust fault bound ranges. It is unlikely that the Tertiary basins of the Qiangtang block formed in this manner. The wavelength of a classically modelled flexural basin is a basically a function of the thickness of the elastic plate and the density difference between sedimentary fill and ductile material underlying the plate. Assuming a model of elastic flexure, the very small wavelengths (5 - 30km) characteristic of Qiangtang basins would then imply extremely thin (~ 1-5 km) effective elastic plate thicknesses. These very low values are difficult to reconcile with any reasonable characterization of crustal rheology. Instead, these relatively small basins likely record the creation of accommodation space created by differential uplift across the strike of folds and faults. Stratal geometries and sedimentation rates reflect the kinematics and geometries of local compressional structures and the mechanical basis for the creation of accommodation space remains uncertain. Finally, the origin of these basins makes it unlikely that early Tertiary sedimentation represents a significant fraction of the upper crust of Tibetan plateau.

Characterization and prediction of extreme events in turbulence

NASA Astrophysics Data System (ADS)

Fonda, Enrico; Iyer, Kartik P.; Sreenivasan, Katepalli R.

2017-11-01

Extreme events in Nature such as tornadoes, large floods and strong earthquakes are rare but can have devastating consequences. The predictability of these events is very limited at present. Extreme events in turbulence are the very large events in small scales that are intermittent in character. We examine events in energy dissipation rate and enstrophy which are several tens to hundreds to thousands of times the mean value. To this end we use our DNS database of homogeneous and isotropic turbulence with Taylor Reynolds numbers spanning a decade, computed with different small scale resolutions and different box sizes, and study the predictability of these events using machine learning. We start with an aggressive data augmentation to virtually increase the number of these rare events by two orders of magnitude and train a deep convolutional neural network to predict their occurrence in an independent data set. The goal of the work is to explore whether extreme events can be predicted with greater assurance than can be done by conventional methods (e.g., D.A. Donzis & K.R. Sreenivasan, J. Fluid Mech. 647, 13-26, 2010).

Contrasting environmental memories by ancient soils on different parent rocks in the South-western Italian Alps

NASA Astrophysics Data System (ADS)

D'Amico, Michele; Catoni, Marcella; Bonifacio, Eleonora; Zanini, Ermanno

2014-05-01

Ancient soils (pre-Holocenic paleosols and vetusols) are uncommon on the Alps, because of the extensive Pleistocenic glaciations which erased most of the previously existing soils, the slope steepness and climatic conditions favoring soil erosion. However, in few sites, particularly in the outermost sections of the Alpine range, Pleistocene glaciers covered only small and scattered surfaces because of the low altitude reached in the basins, and ancient soils could be preserved for long periods of time on particularly stable surfaces. We described and sampled soils on 11 stable surfaces in the Upper Tanaro valley, Ligurian Alps (Southwestern Piemonte, Italy). The sampling sites were characterized by low steepness and elevation between 600 to 1600 m, under present day lower montane Castanea sativa/Ostrya carpinifolia forests, montane Fagus sylvatica and Pinus uncinata forests or montane heath/grazed grassland, on different substrata. In particular, we sampled soils developed on dolomite, limestone, quartzite, gneiss and shales. The soils were always well representative of the pedogenic trends active on the respective parent materials, i.e. the skeletal fraction in each soil was always composed of just one rock type, despite the proximity of lithological boundaries and the small dimensions of the different outcrops, often coexisting on the same stable surface. All the considered profiles showed signs of extremely long pedogenesis and/or different phases of intense pedogenesis interrupted by the deposition of periglacial cover beds in the steepest sites. Up to four phases of intense pedogenesis were recognized where cover beds were developed, presumably during cold Pleistocene phases, as present-day climate is not cold enough to create such periglacial morphologies. In such cases, each cover bed underwent similar pedogenesis, strongly dependent on the parent material: on quartzite, podzols with thick E horizons and well developed placic ones were formed in all phases except the most superficial one (i.e., Holocene phase), where non cemented spodic horizons or weakly cemented ortstein were formed; placic horizons were never found in Holocene soils. On limestone, each cover bed separated soils with extremely hard petrocalcic horizons overlaid by argillic ones. Where no cover beds were observed, podzols with extremely thick E horizons (up to more than 2 m thick) and a very hard, very thick ortstein were formed on quartzite. Red Nitisols-like or reddish brown Luvisols were formed on limestone and dolomite, while red, extremely acidic Alisols, with or without fragipan horizons were formed on shales. Very large stone circles and other large patterned ground features, which can be interpreted as evidence of past permafrost conditions, were preserved on coarse quartzitic conglomerate. These soils represent excellent pedo-signatures of different specific past climatic or environmental conditions, as a response of different lithologies to specific soil-forming environments, which range from warm and humid climates typical of red Luvisols and Nitisols, to cool and wet climates leading to the formation of Podzols with placic or ortstein horizons, to extremely cold and dry ones characterizing permafrost sites and often associated with fragipan formation, to warm and dry leading to the cementation of petrocalcic horizons. The precise dating and interpretation of these soils are intriguing.

From Galaxies to the Intergalactic Medium

NASA Astrophysics Data System (ADS)

Peeples, Molly S.

2010-07-01

Deep in dark matter halos, galaxies are large factories that convert gas into stars. Gas is accreted from the expansive intergalactic medium (IGM); stars process this gas by fusing lighter elements into heavier ones. In this Dissertation, I combine both observations and theories from a variety of subfields of astrophysics with analytic and numerical models in an aim for a comprehensive understanding of the underlying physics of star formation feedback, galaxy chemical evolution, and the IGM. The mass-metallicity relation is an observed tight correlation between the stellar masses and gas-phase oxygen abundances of star-forming galaxies. I show that while the intrinsic scatter in this relation is small, extreme outliers do exist; I argue that these outliers have unusual metallicities for their masses because they have unusual gas fractions for their masses. The low-mass high-metallicity galaxies appear to be nearing the end of their star formation, and thus should have abnormally small gas reservoirs with which to dilute their metals. On the other hand, the high-mass low-metallicity galaxies appear to be undergoing gas-rich galaxy mergers, implying that they have larger-than-normal amounts of gas diluting their metals. I then show through analytic arguments that while gas fractions can have a large impact on observed metallicities, the low-redshift mass-metallicity relation is dominated by outflow properties because typical galaxies have relatively small gas fractions. Specifically, the mass-metallicity relation implies that the efficiency with which galaxies expel metals should scale steeply with galaxy mass. Combining this model with reasonable models for star formation feedback, I show that the outflow metallicity should likewise vary with galaxy mass; future measurements of wind metallicity can therefore inform models of the physics underlying galaxy winds. The high-redshift IGM is primarily observed through the Lyman-alpha absorption of neutral hydrogen along the line of sight to a distant quasar. As samples of close quasar pairs increase, so does the amount of potential information in the Lya forest transverse to the line-of-sight. Using two cosmological hydrodynamic simulations with different photoionization heating rates and thus different IGM temperature-density relations, I show that the small-scale structure in the Lya forest along the line of sight is dominated by the current thermal state of the gas. On the other hand, the transverse signal is sensitive to - and thus could be used to place unique constraints on - the thermal history of the gas. Finally, I investigate how a two-phase medium is treated in a suite of idealized smoothed particle hydrodynamic (SPH) simulations. I show that cold, dense spherical blobs become over-pressured relative to their hot, tenuous surroundings, arguing that this is because of an effective numerical surface tension owing to the un-resolveable density discontinuity. I then test one proposed modification to how pressure gradients are calculated in SPH, the so-called "relative pressure SPH" (rpSPH); while rpSPH leads to a more uniform pressure across the simulation, I show that it is ultimately unstable because of its lack of momentum conservation.

Size fractionation as a tool for separating charcoal of different fuel source and recalcitrance in the wildfire ash layer.

PubMed

Mastrolonardo, Giovanni; Hudspith, Victoria A; Francioso, Ornella; Rumpel, Cornelia; Montecchio, Daniela; Doerr, Stefan H; Certini, Giacomo

2017-10-01

Charcoal is a heterogeneous material exhibiting a diverse range of properties. This variability represents a serious challenge in studies that use the properties of natural charcoal for reconstructing wildfires history in terrestrial ecosystems. In this study, we tested the hypothesis that particle size is a sufficiently robust indicator for separating forest wildfire combustion products into fractions with distinct properties. For this purpose, we examined two different forest environments affected by contrasting wildfires in terms of severity: an eucalypt forest in Australia, which experienced an extremely severe wildfire, and a Mediterranean pine forest in Italy, which burned to moderate severity. We fractionated the ash/charcoal layers collected on the ground into four size fractions (>2, 2-1, 1-0.5, <0.5mm) and analysed them for mineral ash content, elemental composition, chemical structure (by IR spectroscopy), fuel source and charcoal reflectance (by reflected-light microscopy), and chemical/thermal recalcitrance (by chemical and thermal oxidation). At both sites, the finest fraction (<0.5mm) had, by far, the greatest mass. The C concentration and C/N ratio decreased with decreasing size fraction, while pH and the mineral ash content followed the opposite trend. The coarser fractions showed higher contribution of amorphous carbon and stronger recalcitrance. We also observed that certain fuel types were preferentially represented by particular size fractions. We conclude that the differences between ash/charcoal size fractions were most likely primarily imposed by fuel source and secondarily by burning conditions. Size fractionation can therefore serve as a valuable tool to characterise the forest wildfire combustion products, as each fraction displays a narrower range of properties than the whole sample. We propose the mineral ash content of the fractions as criterion for selecting the appropriate number of fractions to analyse. Copyright © 2016. Published by Elsevier B.V.

A mixed helium-oxygen shell in some core-collapse supernova progenitors

NASA Astrophysics Data System (ADS)

Gofman, Roni Anna; Gilkis, Avishai; Soker, Noam

2018-04-01

We evolve models of rotating massive stars up to the stage of iron core collapse using the MESA code and find a shell with a mixed composition of primarily helium and oxygen in some cases. In the parameter space of initial masses of 13-40M⊙ and initial rotation velocities of 0-450 kms-1 that we investigate, we find a mixed helium-oxygen (He-O) shell with a significant total He-O mass and with a helium to oxygen mass ratio in the range of 0.5-2 only for a small fraction of the models. While the shell formation due to mixing is instigated by rotation, the pre-collapse rotation rate is not very high. The fraction of models with a shell of He-O composition required for an energetic collapse-induced thermonuclear explosion is small, as is the fraction of models with high specific angular momentum, which can aid the thermonuclear explosion by retarding the collapse. Our results suggest that the collapse-induced thermonuclear explosion mechanism that was revisited recently can account for at most a small fraction of core-collapse supernovae. The presence of such a mixed He-O shell still might have some implications for core-collapse supernovae, such as some nucleosynthesis processes when jets are present, or might result in peculiar sub-luminous core-collapse supernovae.

A mixed helium-oxygen shell in some core-collapse supernova progenitors

NASA Astrophysics Data System (ADS)

Gofman, Roni Anna; Gilkis, Avishai; Soker, Noam

2018-07-01

We evolve models of rotating massive stars up to the stage of iron core collapse using the MESA code and find a shell with a mixed composition of primarily helium and oxygen in some cases. In the parameter space of initial masses of 13-40 M⊙ and initial rotation velocities of 0-450 km s-1 that we investigate, we find a mixed helium-oxygen (He-O) shell with a significant total He-O mass and with a helium to oxygen mass ratio in the range of 0.5-2 only for a small fraction of the models. While the shell formation due to mixing is instigated by rotation, the pre-collapse rotation rate is not very high. The fraction of models with a shell of He-O composition required for an energetic collapse-induced thermonuclear explosion is small, as is the fraction of models with high specific angular momentum, which can aid the thermonuclear explosion by retarding the collapse. Our results suggest that the collapse-induced thermonuclear explosion mechanism that was revisited recently can account for at most a small fraction of core-collapse supernovae. The presence of such a mixed He-O shell still might have some implications for core-collapse supernovae, such as some nucleosynthesis processes when jets are present, or might result in peculiar sub-luminous core-collapse supernovae.

The Denaturation Transition of DNA in Mixed Solvents

PubMed Central

Hammouda, Boualem; Worcester, David

2006-01-01

The helix-to-coil denaturation transition in DNA has been investigated in mixed solvents at high concentration using ultraviolet light absorption spectroscopy and small-angle neutron scattering. Two solvents have been used: water and ethylene glycol. The “melting” transition temperature was found to be 94°C for 4% mass fraction DNA/d-water and 38°C for 4% mass fraction DNA/d-ethylene glycol. The DNA melting transition temperature was found to vary linearly with the solvent fraction in the mixed solvents case. Deuterated solvents (d-water and d-ethylene glycol) were used to enhance the small-angle neutron scattering signal and 0.1M NaCl (or 0.0058 g/g mass fraction) salt concentration was added to screen charge interactions in all cases. DNA structural information was obtained by small-angle neutron scattering, including a correlation length characteristic of the inter-distance between the hydrogen-containing (desoxyribose sugar-amine base) groups. This correlation length was found to increase from 8.5 to 12.3 Å across the melting transition. Ethylene glycol and water mixed solvents were found to mix randomly in the solvation region in the helix phase, but nonideal solvent mixing was found in the melted coil phase. In the coil phase, solvent mixtures are more effective solvating agents than either of the individual solvents. Once melted, DNA coils behave like swollen water-soluble synthetic polymer chains. PMID:16815902

An Investigation into the Properties and Microstructure of Cement Mixtures Modified with Cellulose Nanocrystal

PubMed Central

Flores, Jessica; Kamali, Mahsa; Ghahremaninezhad, Ali

2017-01-01

This paper aims to examine the effect of cellulose nanocrystals (CNC) on the hydration, transport behavior, and microstructure of cement mixtures. The addition of CNC delayed hydration at an early age but improved hydration at later ages. A small increase in the electrical resistivity of the cement mixtures with CNC was observed. Statistical nanoindentation showed a small tendency to a larger volume fraction of high density calcium-silicate-hydrate (C-S-H) and a smaller volume fraction of low-density C-S-H in the mixture with CNC. PMID:28772857

Applying herbicides to desiccate manzanita brushfields before burning

Treesearch

Jay R. Bentley; Charles A. Graham

1976-01-01

On small plots in a greenleaf manzanita brushfield, herbicides applied as a foliar spray in May killed the small-fuel fractions of the shrubs (leaves, twigs, and small stems up to ½-inch diameter) by October, in tests near Mount Shasta, California. Late summer spraying did not kill most of the small fields until the next spring, and September sprays required 1 year to...

Exact traveling wave solutions of fractional order Boussinesq-like equations by applying Exp-function method

NASA Astrophysics Data System (ADS)

Rahmatullah; Ellahi, Rahmat; Mohyud-Din, Syed Tauseef; Khan, Umar

2018-03-01

We have computed new exact traveling wave solutions, including complex solutions of fractional order Boussinesq-Like equations, occurring in physical sciences and engineering, by applying Exp-function method. The method is blended with fractional complex transformation and modified Riemann-Liouville fractional order operator. Our obtained solutions are verified by substituting back into their corresponding equations. To the best of our knowledge, no other technique has been reported to cope with the said fractional order nonlinear problems combined with variety of exact solutions. Graphically, fractional order solution curves are shown to be strongly related to each other and most importantly, tend to fixate on their integer order solution curve. Our solutions comprise high frequencies and very small amplitude of the wave responses.

Brush-Like Polymers: New Design Platforms for Soft, Dry Materials with Unique Property Relations

NASA Astrophysics Data System (ADS)

Daniel, William Francis McKemie, Jr.

Elastomers represent a unique class of engineering materials due to their light weight, low cost, and desirable combination of softness (105 -107 Pa) and large extensibilities (up to 1000%). Despite these advantages, there exist applications that require many times softer modulus, greater extensibility, and stronger strain hardening for the purpose of mimicking the mechanical properties of systems such as biological tissues. Until recently, only liquid-filled gels were suitable materials for such applications, including soft robotics and implants. A considerable amount of work has been done to create gels with superior properties, but despite unique strengths they also suffer from unique weaknesses. This class of material displays fundamental limitations in the form of heterogeneous structures, solvent loss and phase transitions at extreme temperatures, and loss of liquid fraction upon high deformations. In gels the solvent fraction also introduces a large solvent/polymer interaction parameter which must be carefully considered when designing the final mechanical properties. These energetic considerations further exaggerate the capacity for inconstant mechanical properties caused by fluctuations of the solvent fraction. In order to overcome these weaknesses, a new platform for single component materials with low modulus (<105 Pa) must be developed. Single component systems do not suffer from compositional changes over time and display more stable performance in a wider variety of temperatures and humidity conditions. A solvent-free system also has the potential to be homogeneous which replaces the large energetic interactions with comparatively small architectural interaction parameters. If a solvent-free alternative to liquid-filled gels is to be created, we must first consider the fundamental barrier to softer elastomers, i.e. entanglements - intrinsic topological restrains which define a lower limit of modulus ( 105 Pa). These entanglements are determined by chemistry specific parameters (repeat unit volume and Kuhn segment size) in the polymer liquid (melt) prior to crosslinking. Previous solvent free replacements for gels include elastomers end-linked in semidilute conditions. These materials are generated through crosslinking telechelic polymer chains in semidilute solutions at the onset of chain overlap. At such low polymer concentrations entanglements are greatly diluted and once the resulting gel is dried it creates a supersoft and super-elastic network. Although such methods have successfully generated materials with moduli below the 105 Pa limit and high extensibilities ( 1000%) they present their own limitations. Firstly, the semidilute crosslinking methods uses an impractically large volume of solvent which is unattractive in industry. Second, producing and crosslinking large monodisperse telechelic chains is a nontrivial process leading to large uncertainties in the final network architecture and properties. Specifically, telechelics have a distribution of end-to-end distances and in semidilute solutions with extremely low fraction of chain ends the crosslink reaction is diffusion limited, very slow, and imprecise. In order to achieve a superior solvent-free platform, we propose alteration of mechanical properties through the architectural disentanglement of brush-like polymer structures. In recent year there has been an increase in the synthetic conditions and crosslinking schemes available for producing brush-like structures. This makes brush-like materials an attractive alternative to more restrictive methods such as end-linking. Standard networks have one major control factor outside of chemistry, the network stand length. Brush-like architectures are created from long strands with regularly grafted side chains creating three characteristic length scales which may be independently manipulated. In collaboration with M. Rubinstein, we have utilized bottlebrush polymer architectures (a densely grafted brush-like polymer) to experimentally verify theoretical predictions of disentangled bottlebrush melts. By attaching well-defined side chains onto long polymer backbones, individual polymer strands are separated in space (similar to dilution with solvent) accompanied by a comparatively small increase in the rigidity of the strands. The end result is an architectural disentangled melt with an entanglement plateau modulus as much as three orders of magnitude lower than typical linear polymers and a broadly expanded potential for extensibility once crosslinked.

Attribution of the 2015 record high sea surface temperatures over the central equatorial Pacific and tropical Indian Ocean

NASA Astrophysics Data System (ADS)

Park, In-Hong; Min, Seung-Ki; Yeh, Sang-Wook; Weller, Evan; Kim, Seon Tae

2017-04-01

This study assessed the anthropogenic contribution to the 2015 record-breaking high sea surface temperatures (SSTs) observed in the central equatorial Pacific and tropical Indian Ocean. Considering a close link between extreme warm events in these regions, we conducted a joint attribution analysis using a fraction of attributable risk approach. Probability of occurrence of such extreme anomalies and long-term trends for the two oceanic regions were compared between CMIP5 multi-model simulations with and without anthropogenic forcing. Results show that the excessive warming in both regions is well beyond the range of natural variability and robustly attributable to human activities due to greenhouse gas increase. We further explored associated mechanisms including the Bjerknes feedback and background anthropogenic warming. It is concluded that background warming was the main contribution to the 2015 extreme SST event over the central equatorial Pacific Ocean on a developing El Niño condition, which in turn induced the extreme SST event over the tropical Indian Ocean through the atmospheric bridge effect.

Extremely preterm infants who are small for gestational age have a high risk of early hypophosphatemia and hypokalemia.

PubMed

Boubred, F; Herlenius, E; Bartocci, M; Jonsson, B; Vanpée, M

2015-11-01

Electrolyte balances have not been sufficiently evaluated in extremely preterm infants after early parenteral nutrition. We investigated the risk of early hypophosphatemia and hypokalemia in extremely preterm infants born small for gestational age (SGA) who received nutrition as currently recommended. This prospective, observational cohort study included all consecutive extremely preterm infants born at 24-27 weeks who received high amino acids and lipid perfusion from birth. We evaluated the electrolyte levels of SGA infants and infants born appropriate for gestational age (AGA) during the first five days of life. The 12 SGA infants had lower plasma potassium levels from Day One compared to the 36 AGA infants and were more likely to have hypokalemia (58% vs 17%, p = 0.001) and hypophosphatemia (40% vs 9%, p < 0.01) during the five-day observation period. After adjusting for perinatal factors, SGA remained significantly associated with hypophosphatemia (odds ratio 1.39, confidence intervals 1.07-1.81, p = 0.01). Extremely preterm infants born SGA who were managed with currently recommended early parenteral nutrition had a high risk of early hypokalemia and hypophosphatemia. Potassium and phosphorus intakes should be set at sufficient levels from birth onwards, especially in SGA infants. ©2015 Foundation Acta Paediatrica. Published by John Wiley & Sons Ltd.

Cultural definitions of elder maltreatment in Portugal.

PubMed

Mercurio, Andrea E; Nyborn, Justin

2006-01-01

A small convenience sample of 34 participants (17 males, 17 females) from the Portuguese islands of the Azores and Madeira were asked to provide examples of how extreme, moderate, and mild maltreatment towards an elder would be defined in their culture and society. Neglect, especially psychological neglect, physical maltreatment, and psychological maltreatment were the most frequently reported types of maltreatment. References to neglect and physical maltreatment appeared most often as examples of extreme maltreatment. In general, men were somewhat more likely than women to provide examples of physical aggression in their examples of maltreatment. As examples of extreme maltreatment, females provided significantly more examples of abandonment than males. Although interpretations of the findings must be cautious because of the small sample size and limited statistical power, the study illustrates a procedure for assessing constructs of elder mistreatment in a way that attends to respondents' own constructions of the phenomenon.

An Overview of 2014 SBIR Phase I and Phase II Materials Structures for Extreme Environments

NASA Technical Reports Server (NTRS)

Nguyen, Hung D.; Steele, Gynelle C.; Morris, Jessica R.

2015-01-01

NASA's Small Business Innovation Research (SBIR) program focuses on technological innovation by investing in development of innovative concepts and technologies to help NASA mission directorates address critical research needs for Agency programs. This report highlights nine of the innovative SBIR 2014 Phase I and Phase II projects that emphasize one of NASA Glenn Research Center's six core competencies-Materials and Structures for Extreme Environments. The technologies cover a wide spectrum of applications such as high temperature environmental barrier coating systems, deployable space structures, solid oxide fuel cells, and self-lubricating hard coatings for extreme temperatures. Each featured technology describes an innovation, technical objective, and highlights NASA commercial and industrial applications. This report provides an opportunity for NASA engineers, researchers, and program managers to learn how NASA SBIR technologies could help their programs and projects, and lead to collaborations and partnerships between the small SBIR companies and NASA that would benefit both.

Molybdenum accumulation in Cariaco basin sediment over the past 24 k.y.: A record of water-column anoxia and climate

USGS Publications Warehouse

Dean, W.E.; Piper, D.Z.; Peterson, L.C.

1999-01-01

Molybdenum (Mo) concentrations in a sediment core from the Cariaco basin on the Venezuelan continental shelf can be partitioned between a marine fraction and a terrigenous fraction. The accumulation rate of the marine fraction of Mo increased abruptly 15 000 calendar years ago (15 ka), from 4 ??g ?? cm-2 ?? yr-1, and then decreased abruptly at 9 ka. The accumulation rate remained high throughout this 6 k.y. period, but exhibited maxima at 15-14 and 12.5 ka, corresponding in time to meltwater pulse IA into the Gulf of Mexico and the onset of the Younger Dryas cold event, respectively. The marine fraction of Mo is interpreted in terms of redox conditions of bottom water, as dictated by both the flux of settling organic matter and bottom-water residence time. Correspondence between geochemical extremes in this core with changes in sea level and global climate demonstrates the high degree to which this ocean-margin basin has responded to the paleoceanographic regime throughout the past 24 k.y.

First-principles investigations of equilibrium Ca, Mg, Si and O isotope fractionations between silicate melts and minerals

NASA Astrophysics Data System (ADS)

Qi, Y.; Liu, X.; Kang, J.; He, L.

2017-12-01

Equilibrium isotope fractionation factors are essential for using stable isotope data to study many geosciences processes such as planetary differentiation and mantle evolution. The mass-dependent equilibrium isotope fractionation is primarily controlled by the difference in bond energies triggered by the isotope substitution. With the recent advances in computational capabilities, first-principles calculation has become a reliable tool to investigate equilibrium isotopic fractionations, greatly improving our understanding of the factors controlling isotope fractionations. It is important to understand the isotope fractionation between melts and minerals because magmatism is critical for creating and shaping the Earth. However, because isotope fractionation between melts and minerals is small at high temperature, it is difficult to experimentally calibrate such small signature. Due to the disordered and dynamic character of melts, calculations of equilibrium isotope fractionation of melts are more challenging than that for gaseous molecules or minerals. Here, we apply first-principles molecular dynamics method to calculate equilibrium Ca, Mg, Si, and O isotope fractionations between silicate melts and minerals. Our results show that equilibrium Mg, Si, and O isotope fractionations between olivine and pure Mg2SiO4 melt are close to zero at high temperature (e.g. δ26Mgmelt-ol = 0.03 ± 0.04‰, δ30Simelt-ol = -0.06 ± 0.07‰, δ18Omelt-ol = 0.07‰ ± 0.08 at 1500 K). Equilibrium Ca, Mg, Si, and O isotope fractionations between diopside and basalt melt (67% CaMgSi2O6 + 33% CaAl2Si2O8) are also negligible at high temperature (e.g. δ44/40Camelt-cpx = -0.01 ± 0.02‰, δ26Mgmelt-cpx = -0.05 ± 0.14‰, δ30Simelt-cpx = 0.04 ± 0.04‰, δ18Omelt-cpx = 0.03 ± 0.07‰ at 1500 K). These results are consistent with the observations in natural samples that there is no significant Ca, Mg, Si, and O isotope fractionation during mantle partial melting, demonstrating the reliability of our methods. Thus, our results can be used to understand stable isotope fractionation during partial melting of mantle peridotite or fractional crystallization during magmatic differentiation. The first-principles molecular dynamics method is a promising tool to obtain equilibrium fractionation of more isotope systems for complicate liquids.

Extreme events in total ozone over Arosa: Application of extreme value theory and fingerprints of atmospheric dynamics and chemistry and their effects on mean values and long-term changes

NASA Astrophysics Data System (ADS)

Rieder, Harald E.; Staehelin, Johannes; Maeder, Jörg A.; Peter, Thomas; Ribatet, Mathieu; Davison, Anthony C.; Stübi, Rene; Weihs, Philipp; Holawe, Franz

2010-05-01

In this study tools from extreme value theory (e.g. Coles, 2001; Ribatet, 2007) are applied for the first time in the field of stratospheric ozone research, as statistical analysis showed that previously used concepts assuming a Gaussian distribution (e.g. fixed deviations from mean values) of total ozone data do not address the internal data structure concerning extremes adequately. The study illustrates that tools based on extreme value theory are appropriate to identify ozone extremes and to describe the tails of the world's longest total ozone record (Arosa, Switzerland - for details see Staehelin et al., 1998a,b) (Rieder et al., 2010a). A daily moving threshold was implemented for consideration of the seasonal cycle in total ozone. The frequency of days with extreme low (termed ELOs) and extreme high (termed EHOs) total ozone and the influence of those on mean values and trends is analyzed for Arosa total ozone time series. The results show (a) an increase in ELOs and (b) a decrease in EHOs during the last decades and (c) that the overall trend during the 1970s and 1980s in total ozone is strongly dominated by changes in these extreme events. After removing the extremes, the time series shows a strongly reduced trend (reduction by a factor of 2.5 for trend in annual mean). Furthermore, it is shown that the fitted model represents the tails of the total ozone data set with very high accuracy over the entire range (including absolute monthly minima and maxima). Also the frequency distribution of ozone mini-holes (using constant thresholds) can be calculated with high accuracy. Analyzing the tails instead of a small fraction of days below constant thresholds provides deeper insight in time series properties. Excursions in the frequency of extreme events reveal "fingerprints" of dynamical factors such as ENSO or NAO, and chemical factors, such as cold Arctic vortex ozone losses, as well as major volcanic eruptions of the 20th century (e.g. Gunung Agung, El Chichón, Mt. Pinatubo). Furthermore, atmospheric loading in ozone depleting substances lead to a continuous modification of column ozone in the northern hemisphere also with respect to extreme values (partly again in connection with polar vortex contributions). It is shown that application of extreme value theory allows the identification of many more such fingerprints than conventional time series analysis of annual and seasonal mean values. Especially, the analysis shows the strong influence of dynamics, revealing that even moderate ENSO and NAO events have a discernible effect on total ozone (Rieder et al., 2010b). Overall the presented new extremes concept provides new information on time series properties, variability, trends and the influence of dynamics and chemistry, complementing earlier analyses focusing only on monthly (or annual) mean values. References: Coles, S.: An Introduction to Statistical Modeling of Extreme Values, Springer Series in Statistics, ISBN:1852334592, Springer, Berlin, 2001. Ribatet, M.: POT: Modelling peaks over a threshold, R News, 7, 34-36, 2007. Rieder ,H.E., Staehelin, J., Maeder, J.A., Ribatet, M., Stübi, R., Weihs, P., Holawe, F., Peter, T., and A.D., Davison (2010): Extreme events in total ozone over Arosa - Part I: Application of extreme value theory, to be submitted to ACPD. Rieder, H.E., Staehelin, J., Maeder, J.A., Ribatet, M., Stübi, R., Weihs, P., Holawe, F., Peter, T., and A.D., Davison (2010): Extreme events in total ozone over Arosa - Part II: Fingerprints of atmospheric dynamics and chemistry and effects on mean values and long-term changes, to be submitted to ACPD. Staehelin, J., Renaud, A., Bader, J., McPeters, R., Viatte, P., Hoegger, B., Bugnion, V., Giroud, M., and Schill, H.: Total ozone series at Arosa (Switzerland): Homogenization and data comparison, J. Geophys. Res., 103(D5), 5827-5842, doi:10.1029/97JD02402, 1998a. Staehelin, J., Kegel, R., and Harris, N. R.: Trend analysis of the homogenized total ozone series of Arosa (Switzerland), 1929-1996, J. Geophys. Res., 103(D7), 8389-8400, doi:10.1029/97JD03650, 1998b.

Spitzer 24 Micron Observations of Optical/Near-Infrared-Selected Extremely Red Galaxies: Evidence for Assembly of Massive Galaxies at Z approximately equal to 1-2?

NASA Technical Reports Server (NTRS)

Yan, Lin; Choi, Philip I.; Fadda, D.; Marleau, F. R.; Soifer, B. T.; Im, M.; Armus, L.; Frayer, D. T.; Storrie-Lombardi, L. J.; Thompson, D. J.;

Anomalous subdiffusion in fluorescence photobleaching recovery: a Monte Carlo study.

PubMed Central

Saxton, M J

2001-01-01

Anomalous subdiffusion is hindered diffusion in which the mean-square displacement of a diffusing particle is proportional to some power of time less than one. Anomalous subdiffusion has been observed for a variety of lipids and proteins in the plasma membranes of a variety of cells. Fluorescence photobleaching recovery experiments with anomalous subdiffusion are simulated to see how to analyze the data. It is useful to fit the recovery curve with both the usual recovery equation and the anomalous one, and to judge the goodness of fit on log-log plots. The simulations show that the simplest approximate treatment of anomalous subdiffusion usually gives good results. Three models of anomalous subdiffusion are considered: obstruction, fractional Brownian motion, and the continuous-time random walk. The models differ significantly in their behavior at short times and in their noise level. For obstructed diffusion the approach to the percolation threshold is marked by a large increase in noise, a broadening of the distribution of diffusion coefficients and anomalous subdiffusion exponents, and the expected abrupt decrease in the mobile fraction. The extreme fluctuations in the recovery curves at and near the percolation threshold result from extreme fluctuations in the geometry of the percolation cluster. PMID:11566793

Somersault of Paramecium in extremely confined environments.

PubMed

Jana, Saikat; Eddins, Aja; Spoon, Corrie; Jung, Sunghwan

2015-08-19

We investigate various swimming modes of Paramecium in geometric confinements and a non-swimming self-bending behavior like a somersault, which is quite different from the previously reported behaviors. We observe that Paramecia execute directional sinusoidal trajectories in thick fluid films, whereas Paramecia meander around a localized region and execute frequent turns due to collisions with adjacent walls in thin fluid films. When Paramecia are further constrained in rectangular channels narrower than the length of the cell body, a fraction of meandering Paramecia buckle their body by pushing on the channel walls. The bucking (self-bending) of the cell body allows the Paramecium to reorient its anterior end and explore a completely new direction in extremely confined spaces. Using force deflection method, we quantify the Young's modulus of the cell and estimate the swimming and bending powers exerted by Paramecium. The analysis shows that Paramecia can utilize a fraction of its swimming power to execute the self-bending maneuver within the confined channel and no extra power may be required for this new kind of self-bending behavior. This investigation sheds light on how micro-organisms can use the flexibility of the body to actively navigate within confined spaces.

Somersault of Paramecium in extremely confined environments

PubMed Central

Jana, Saikat; Eddins, Aja; Spoon, Corrie; Jung, Sunghwan

2015-01-01

We investigate various swimming modes of Paramecium in geometric confinements and a non-swimming self-bending behavior like a somersault, which is quite different from the previously reported behaviors. We observe that Paramecia execute directional sinusoidal trajectories in thick fluid films, whereas Paramecia meander around a localized region and execute frequent turns due to collisions with adjacent walls in thin fluid films. When Paramecia are further constrained in rectangular channels narrower than the length of the cell body, a fraction of meandering Paramecia buckle their body by pushing on the channel walls. The bucking (self-bending) of the cell body allows the Paramecium to reorient its anterior end and explore a completely new direction in extremely confined spaces. Using force deflection method, we quantify the Young’s modulus of the cell and estimate the swimming and bending powers exerted by Paramecium. The analysis shows that Paramecia can utilize a fraction of its swimming power to execute the self-bending maneuver within the confined channel and no extra power may be required for this new kind of self-bending behavior. This investigation sheds light on how micro-organisms can use the flexibility of the body to actively navigate within confined spaces. PMID:26286234

Somersault of Paramecium in extremely confined environments

NASA Astrophysics Data System (ADS)

Jana, Saikat; Eddins, Aja; Spoon, Corrie; Jung, Sunghwan

2015-08-01

We investigate various swimming modes of Paramecium in geometric confinements and a non-swimming self-bending behavior like a somersault, which is quite different from the previously reported behaviors. We observe that Paramecia execute directional sinusoidal trajectories in thick fluid films, whereas Paramecia meander around a localized region and execute frequent turns due to collisions with adjacent walls in thin fluid films. When Paramecia are further constrained in rectangular channels narrower than the length of the cell body, a fraction of meandering Paramecia buckle their body by pushing on the channel walls. The bucking (self-bending) of the cell body allows the Paramecium to reorient its anterior end and explore a completely new direction in extremely confined spaces. Using force deflection method, we quantify the Young’s modulus of the cell and estimate the swimming and bending powers exerted by Paramecium. The analysis shows that Paramecia can utilize a fraction of its swimming power to execute the self-bending maneuver within the confined channel and no extra power may be required for this new kind of self-bending behavior. This investigation sheds light on how micro-organisms can use the flexibility of the body to actively navigate within confined spaces.

Improved belief propagation algorithm finds many Bethe states in the random-field Ising model on random graphs

NASA Astrophysics Data System (ADS)

Perugini, G.; Ricci-Tersenghi, F.

2018-01-01

We first present an empirical study of the Belief Propagation (BP) algorithm, when run on the random field Ising model defined on random regular graphs in the zero temperature limit. We introduce the notion of extremal solutions for the BP equations, and we use them to fix a fraction of spins in their ground state configuration. At the phase transition point the fraction of unconstrained spins percolates and their number diverges with the system size. This in turn makes the associated optimization problem highly non trivial in the critical region. Using the bounds on the BP messages provided by the extremal solutions we design a new and very easy to implement BP scheme which is able to output a large number of stable fixed points. On one hand this new algorithm is able to provide the minimum energy configuration with high probability in a competitive time. On the other hand we found that the number of fixed points of the BP algorithm grows with the system size in the critical region. This unexpected feature poses new relevant questions about the physics of this class of models.

Production and properties of an exopolysaccharide synthesized by the extreme halophilic archaeon Haloterrigena turkmenica.

PubMed

Squillaci, Giuseppe; Finamore, Rosario; Diana, Paola; Restaino, Odile Francesca; Schiraldi, Chiara; Arbucci, Salvatore; Ionata, Elena; La Cara, Francesco; Morana, Alessandra

2016-01-01

We have isolated a novel exopolysaccharide (EPS) produced by the extreme halophilic archaeon Haloterrigena turkmenica. Some features, remarkable from an industrial point of view, such as emulsifying and antioxidant properties, were investigated. H. turkmenica excreted 20.68 mg of EPS per 100 ml of culture medium when grown in usual medium supplemented with glucose. The microorganism excreted the biopolymer mainly in the middle exponential growth phase and reached the maximal production in the stationary phase. Analyses by anion exchange chromatography and SEC-TDA Viscotek indicated that the EPS was composed of two main fractions of 801.7 and 206.0 kDa. It was a sulfated heteropolysaccharide containing glucose, galactose, glucosamine, galactosamine, and glucuronic acid. Studies performed utilizing the mixture of EPS anionic fractions showed that the biopolymer had emulsifying activity towards vegetable oils comparable or superior to that exhibited by the controls, moderate antioxidant power when tested with 2,2'-diphenyl-1-picrylhydrazyl (DPPH(·)), and moisture-retention ability higher than hyaluronic acid (HA). The EPS from H. turkmenica is the first exopolysaccharide produced by an archaea to be characterized in terms of properties that can have potential biotechnological applications.

Quantifying the effect of trend, fluctuation, and extreme event of climate change on ecosystem productivity.

PubMed

Liu, Yupeng; Yu, Deyong; Su, Yun; Hao, Ruifang

2014-12-01

Climate change comprises three fractions of trend, fluctuation, and extreme event. Assessing the effect of climate change on terrestrial ecosystem requires an understanding of the action mechanism of these fractions, respectively. This study examined 11 years of remotely sensed-derived net primary productivity (NPP) to identify the impacts of the trend and fluctuation of climate change as well as extremely low temperatures caused by a freezing disaster on ecosystem productivity in Hunan province, China. The partial least squares regression model was used to evaluate the contributions of temperature, precipitation, and photosynthetically active radiation (PAR) to NPP variation. A climatic signal decomposition and contribution assessment model was proposed to decompose climate factors into trend and fluctuation components. Then, we quantitatively evaluated the contributions of each component of climatic factors to NPP variation. The results indicated that the total contribution of the temperature, precipitation, and PAR to NPP variation from 2001 to 2011 in Hunan province is 85 %, and individual contributions of the temperature, precipitation, and PAR to NPP variation are 44 % (including 34 % trend contribution and 10 % fluctuation contribution), 5 % (including 4 % trend contribution and 1 % fluctuation contribution), and 36 % (including 30 % trend contribution and 6 % fluctuation contribution), respectively. The contributions of temperature fluctuation-driven NPP were higher in the north and lower in the south, and the contributions of precipitation trend-driven NPP and PAR fluctuation-driven NPP are higher in the west and lower in the east. As an instance of occasionally triggered disturbance in 2008, extremely low temperatures and a freezing disaster produced an abrupt decrease of NPP in forest and grass ecosystems. These results prove that the climatic trend change brought about great impacts on ecosystem productivity and that climatic fluctuations and extreme events can also alter the ecosystem succession process, even resulting in an alternative trajectory. All of these findings could improve our understanding of the impacts of climate change on the provision of ecosystem functions and services and can also provide a basis for policy makers to apply adaptive measures to overcome the unfavorable influence of climate change.

Sensitivity of soil carbon fractions and their specific stabilization mechanisms to extreme soil warming in a subarctic grassland.

PubMed

Poeplau, Christopher; Kätterer, Thomas; Leblans, Niki I W; Sigurdsson, Bjarni D

2017-03-01

Terrestrial carbon cycle feedbacks to global warming are major uncertainties in climate models. For in-depth understanding of changes in soil organic carbon (SOC) after soil warming, long-term responses of SOC stabilization mechanisms such as aggregation, organo-mineral interactions and chemical recalcitrance need to be addressed. This study investigated the effect of 6 years of geothermal soil warming on different SOC fractions in an unmanaged grassland in Iceland. Along an extreme warming gradient of +0 to ~+40 °C, we isolated five fractions of SOC that varied conceptually in turnover rate from active to passive in the following order: particulate organic matter (POM), dissolved organic carbon (DOC), SOC in sand and stable aggregates (SA), SOC in silt and clay (SC-rSOC) and resistant SOC (rSOC). Soil warming of 0.6 °C increased bulk SOC by 22 ± 43% (0-10 cm soil layer) and 27 ± 54% (20-30 cm), while further warming led to exponential SOC depletion of up to 79 ± 14% (0-10 cm) and 74 ± 8% (20-30) in the most warmed plots (~+40 °C). Only the SA fraction was more sensitive than the bulk soil, with 93 ± 6% (0-10 cm) and 86 ± 13% (20-30 cm) SOC losses and the highest relative enrichment in 13 C as an indicator for the degree of decomposition (+1.6 ± 1.5‰ in 0-10 cm and +1.3 ± 0.8‰ in 20-30 cm). The SA fraction mass also declined along the warming gradient, while the SC fraction mass increased. This was explained by deactivation of aggregate-binding mechanisms. There was no difference between the responses of SC-rSOC (slow-cycling) and rSOC (passive) to warming, and 13 C enrichment in rSOC was equal to that in bulk soil. We concluded that the sensitivity of SOC to warming was not a function of age or chemical recalcitrance, but triggered by changes in biophysical stabilization mechanisms, such as aggregation. © 2016 John Wiley & Sons Ltd.

Extreme habitats as refuge from parasite infections? Evidence from an extremophile fish

NASA Astrophysics Data System (ADS)

Tobler, Michael; Schlupp, Ingo; García de León, Francisco J.; Glaubrecht, Matthias; Plath, Martin

2007-05-01

Living in extreme habitats typically requires costly adaptations of any organism tolerating these conditions, but very little is known about potential benefits that trade off these costs. We suggest that extreme habitats may function as refuge from parasite infections, since parasites can become locally extinct either directly, through selection by an extreme environmental parameter on free-living parasite stages, or indirectly, through selection on other host species involved in its life cycle. We tested this hypothesis in a small freshwater fish, the Atlantic molly ( Poecilia mexicana) that inhabits normal freshwaters as well as extreme habitats containing high concentrations of toxic hydrogen sulfide. Populations from such extreme habitats are significantly less parasitized by the trematode Uvulifer sp. than a population from a non-sulfidic habitat. We suggest that reduced parasite prevalence may be a benefit of living in sulfidic habitats.

Projected changes in snowfall extremes and interannual variability of snowfall in the western United States

NASA Astrophysics Data System (ADS)

Lute, A. C.; Abatzoglou, J. T.; Hegewisch, K. C.

2015-02-01

Projected warming will have significant impacts on snowfall accumulation and melt, with implications for water availability and management in snow-dominated regions. Changes in snowfall extremes are confounded by projected increases in precipitation extremes. Downscaled climate projections from 20 global climate models were bias-corrected to montane Snowpack Telemetry stations across the western United States to assess mid-21st century changes in the mean and variability of annual snowfall water equivalent (SFE) and extreme snowfall events, defined by the 90th percentile of cumulative 3 day SFE amounts. Declines in annual SFE and number of snowfall days were projected for all stations. Changes in the magnitude of snowfall event quantiles were sensitive to historical winter temperature. At climatologically cooler locations, such as in the Rocky Mountains, changes in the magnitude of snowfall events mirrored changes in the distribution of precipitation events, with increases in extremes and less change in more moderate events. By contrast, declines in snowfall event magnitudes were found for all quantiles in warmer locations. Common to both warmer and colder sites was a relative increase in the magnitude of snowfall extremes compared to annual SFE and a larger fraction of annual SFE from snowfall extremes. The coefficient of variation of annual SFE increased up to 80% in warmer montane regions due to projected declines in snowfall days and the increased contribution of snowfall extremes to annual SFE. In addition to declines in mean annual SFE, more frequent low-snowfall years and less frequent high-snowfall years were projected for every station.

Identification of Tropical-Extratropical Interactions and Extreme Precipitation Events in the Middle East Based On Potential Vorticity and Moisture Transport

NASA Astrophysics Data System (ADS)

de Vries, A. J.; Ouwersloot, H. G.; Feldstein, S. B.; Riemer, M.; El Kenawy, A. M.; McCabe, M. F.; Lelieveld, J.

2018-01-01

Extreme precipitation events in the otherwise arid Middle East can cause flooding with dramatic socioeconomic impacts. Most of these events are associated with tropical-extratropical interactions, whereby a stratospheric potential vorticity (PV) intrusion reaches deep into the subtropics and forces an incursion of high poleward vertically integrated water vapor transport (IVT) into the Middle East. This study presents an object-based identification method for extreme precipitation events based on the combination of these two larger-scale meteorological features. The general motivation for this approach is that precipitation is often poorly simulated in relatively coarse weather and climate models, whereas the synoptic-scale circulation is much better represented. The algorithm is applied to ERA-Interim reanalysis data (1979-2015) and detects 90% (83%) of the 99th (97.5th) percentile of extreme precipitation days in the region of interest. Our results show that stratospheric PV intrusions and IVT structures are intimately connected to extreme precipitation intensity and seasonality. The farther south a stratospheric PV intrusion reaches, the larger the IVT magnitude, and the longer the duration of their combined occurrence, the more extreme the precipitation. Our algorithm detects a large fraction of the climatological rainfall amounts (40-70%), heavy precipitation days (50-80%), and the top 10 extreme precipitation days (60-90%) at many sites in southern Israel and the northern and western parts of Saudi Arabia. This identification method provides a new tool for future work to disentangle teleconnections, assess medium-range predictability, and improve understanding of climatic changes of extreme precipitation in the Middle East and elsewhere.

Importance of a Global Approach to Using Regional Models in the Assessment of Source-Receptor Relationships of Mercury

EPA Science Inventory

Regional atmospheric models simulate their pertinent processes over a limited portion of the global atmosphere. This portion of the atmosphere can be a large fraction, as in the case of continental-scale modeling, or small fraction, as in the case of urban-scale modeling. Regio...

Blood Vessel Tension Tester

NASA Technical Reports Server (NTRS)

1978-01-01

In the photo, a medical researcher is using a specially designed laboratory apparatus for measuring blood vessel tension. It was designed by Langley Research Center as a service to researchers of Norfolk General Hospital and Eastern Virginia Medical School, Norfolk, Virginia. The investigators are studying how vascular smooth muscle-muscle in the walls of blood vessels-reacts to various stimulants, such as coffee, tea, alcohol or drugs. They sought help from Langley Research Center in devising a method of measuring the tension in blood vessel segments subjected to various stimuli. The task was complicated by the extremely small size of the specimens to be tested, blood vessel "loops" resembling small rubber bands, some only half a millimeter in diameter. Langley's Instrumentation Development Section responded with a miniaturized system whose key components are a "micropositioner" for stretching a length of blood vessel and a strain gage for measuring the smooth muscle tension developed. The micropositioner is a two-pronged holder. The loop of Mood vessel is hooked over the prongs and it is stretched by increasing the distance between the prongs in minute increments, fractions of a millimeter. At each increase, the tension developed is carefully measured. In some experiments, the holder and specimen are lowered into the test tubes shown, which contain a saline solution simulating body fluid; the effect of the compound on developed tension is then measured. The device has functioned well and the investigators say it has saved several months research time.

Intracellular vesicles as reproduction elements in cell wall-deficient L-form bacteria.

PubMed

Briers, Yves; Staubli, Titu; Schmid, Markus C; Wagner, Michael; Schuppler, Markus; Loessner, Martin J

2012-01-01

Cell wall-deficient bacteria, or L-forms, represent an extreme example of bacterial plasticity. Stable L-forms can multiply and propagate indefinitely in the absence of a cell wall. Data presented here are consistent with the model that intracellular vesicles in Listeria monocytogenes L-form cells represent the actual viable reproductive elements. First, small intracellular vesicles are formed along the mother cell cytoplasmic membrane, originating from local phospholipid accumulation. During growth, daughter vesicles incorporate a small volume of the cellular cytoplasm, and accumulate within volume-expanding mother cells. Confocal Raman microspectroscopy demonstrated the presence of nucleic acids and proteins in all intracellular vesicles, but only a fraction of which reveals metabolic activity. Following collapse of the mother cell and release of the daughter vesicles, they can establish their own membrane potential required for respiratory and metabolic processes. Premature depolarization of the surrounding membrane promotes activation of daughter cell metabolism prior to release. Based on genome resequencing of L-forms and comparison to the parental strain, we found no evidence for predisposing mutations that might be required for L-form transition. Further investigations revealed that propagation by intracellular budding not only occurs in Listeria species, but also in L-form cells generated from different Enterococcus species. From a more general viewpoint, this type of multiplication mechanism seems reminiscent of the physicochemical self-reproducing properties of abiotic lipid vesicles used to study the primordial reproduction pathways of putative prokaryotic precursor cells.

Intracellular Vesicles as Reproduction Elements in Cell Wall-Deficient L-Form Bacteria

PubMed Central

Briers, Yves; Staubli, Titu; Schmid, Markus C.; Wagner, Michael; Schuppler, Markus; Loessner, Martin J.

2012-01-01

Cell wall-deficient bacteria, or L-forms, represent an extreme example of bacterial plasticity. Stable L-forms can multiply and propagate indefinitely in the absence of a cell wall. Data presented here are consistent with the model that intracellular vesicles in Listeria monocytogenes L-form cells represent the actual viable reproductive elements. First, small intracellular vesicles are formed along the mother cell cytoplasmic membrane, originating from local phospholipid accumulation. During growth, daughter vesicles incorporate a small volume of the cellular cytoplasm, and accumulate within volume-expanding mother cells. Confocal Raman microspectroscopy demonstrated the presence of nucleic acids and proteins in all intracellular vesicles, but only a fraction of which reveals metabolic activity. Following collapse of the mother cell and release of the daughter vesicles, they can establish their own membrane potential required for respiratory and metabolic processes. Premature depolarization of the surrounding membrane promotes activation of daughter cell metabolism prior to release. Based on genome resequencing of L-forms and comparison to the parental strain, we found no evidence for predisposing mutations that might be required for L-form transition. Further investigations revealed that propagation by intracellular budding not only occurs in Listeria species, but also in L-form cells generated from different Enterococcus species. From a more general viewpoint, this type of multiplication mechanism seems reminiscent of the physicochemical self-reproducing properties of abiotic lipid vesicles used to study the primordial reproduction pathways of putative prokaryotic precursor cells. PMID:22701656

Error Patterns with Fraction Calculations at Fourth Grade as a Function of Students' Mathematics Achievement Status.

PubMed

Schumacher, Robin F; Malone, Amelia S

2017-09-01

The goal of the present study was to describe fraction-calculation errors among 4 th -grade students and determine whether error patterns differed as a function of problem type (addition vs. subtraction; like vs. unlike denominators), orientation (horizontal vs. vertical), or mathematics-achievement status (low- vs. average- vs. high-achieving). We specifically addressed whether mathematics-achievement status was related to students' tendency to operate with whole number bias. We extended this focus by comparing low-performing students' errors in two instructional settings that focused on two different types of fraction understandings: core instruction that focused on part-whole understanding vs. small-group tutoring that focused on magnitude understanding. Results showed students across the sample were more likely to operate with whole number bias on problems with unlike denominators. Students with low or average achievement (who only participated in core instruction) were more likely to operate with whole number bias than students with low achievement who participated in small-group tutoring. We suggest instruction should emphasize magnitude understanding to sufficiently increase fraction understanding for all students in the upper elementary grades.

Gyroid Structures at Highly Asymmetric Volume Fractions by Blending of ABC Triblock Terpolymer and AB Diblock Copolymer

DOE Office of Scientific and Technical Information (OSTI.GOV)

Ahn, Seonghyeon; Kwak, Jongheon; Choi, Chungryong

Here, we investigated, via small angle X-ray scattering and transmission electron microscopy, the morphologies of binary blend of polyisoprene- b-polystyrene- b-poly(2-vinylpyridine) (ISP) triblock terpolymer and polyisoprene-b-polystyrene (IS) diblock copolymer. An asymmetric ISP with volume fractions ( f) of 0.12, 0.75, and 0.13 for PI, PS, and P2VP blocks, respectively, showed a new morphology: Coexistence of spheres and cylinders with tetragonal packing. Asymmetric IS with f I = 0.11 and f S =0.89 showed conventional body-centered cubic spherical microdomains. Very interestingly, a binary blend of ISP and IS with overall volume fractions of f I = 0.12, f S = 0.79,more » and f P = 0.09 exhibited core-shell double gyroid (CSG: Q 230 space group), where PI consists of thin core and PS forms thick shell, while P2VP becomes thin matrix. It is very unusual to form highly asymmetric CSG with the matrix having very small volume fraction (0.09).« less

Gyroid Structures at Highly Asymmetric Volume Fractions by Blending of ABC Triblock Terpolymer and AB Diblock Copolymer

DOE PAGES

Ahn, Seonghyeon; Kwak, Jongheon; Choi, Chungryong; ...

2017-11-08

Here, we investigated, via small angle X-ray scattering and transmission electron microscopy, the morphologies of binary blend of polyisoprene- b-polystyrene- b-poly(2-vinylpyridine) (ISP) triblock terpolymer and polyisoprene-b-polystyrene (IS) diblock copolymer. An asymmetric ISP with volume fractions ( f) of 0.12, 0.75, and 0.13 for PI, PS, and P2VP blocks, respectively, showed a new morphology: Coexistence of spheres and cylinders with tetragonal packing. Asymmetric IS with f I = 0.11 and f S =0.89 showed conventional body-centered cubic spherical microdomains. Very interestingly, a binary blend of ISP and IS with overall volume fractions of f I = 0.12, f S = 0.79,more » and f P = 0.09 exhibited core-shell double gyroid (CSG: Q 230 space group), where PI consists of thin core and PS forms thick shell, while P2VP becomes thin matrix. It is very unusual to form highly asymmetric CSG with the matrix having very small volume fraction (0.09).« less

Fourier fringe analysis and its application to metrology of extreme physical phenomena: a review [Invited].

PubMed

Takeda, Mitsuo

2013-01-01

The paper reviews a technique for fringe analysis referred to as Fourier fringe analysis (FFA) or the Fourier transform method, with a particular focus on its application to metrology of extreme physical phenomena. Examples include the measurement of extremely small magnetic fields with subfluxon sensitivity by electron wave interferometry, subnanometer wavefront evaluation of projection optics for extreme UV lithography, the detection of sub-Ångstrom distortion of a crystal lattice, and the measurement of ultrashort optical pulses in the femotsecond to attosecond range, which show how the advantages of FFA are exploited in these cutting edge applications.

Atmospheric rivers and the mass mortality of wild oysters: insight into an extreme future?

PubMed

Cheng, Brian S; Chang, Andrew L; Deck, Anna; Ferner, Matthew C

2016-12-14

Climate change is predicted to increase the frequency and severity of extreme events. However, the biological consequences of extremes remain poorly resolved owing to their unpredictable nature and difficulty in quantifying their mechanisms and impacts. One key feature delivering precipitation extremes is an atmospheric river (AR), a long and narrow filament of enhanced water vapour transport. Despite recent attention, the biological impacts of ARs remain undocumented. Here, we use biological data coupled with remotely sensed and in situ environmental data to describe the role of ARs in the near 100% mass mortality of wild oysters in northern San Francisco Bay. In March 2011, a series of ARs made landfall within California, contributing an estimated 69.3% of the precipitation within the watershed and driving an extreme freshwater discharge into San Francisco Bay. This discharge caused sustained low salinities (less than 6.3) that almost perfectly matched the known oyster critical salinity tolerance and was coincident with a mass mortality of one of the most abundant populations throughout this species' range. This is a concern, because wild oysters remain a fraction of their historical abundance and have yet to recover. This study highlights a novel mechanism by which precipitation extremes may affect natural systems and the persistence of sensitive species in the face of environmental change. © 2016 The Author(s).

Multimodal MRI in cerebral small vessel disease: its relationship with cognition and sensitivity to change over time.

PubMed

Nitkunan, Arani; Barrick, Tom R; Charlton, Rebecca A; Clark, Chris A; Markus, Hugh S

2008-07-01

Cerebral small vessel disease is the most common cause of vascular dementia. Interest in using MRI parameters as surrogate markers of disease to assess therapies is increasing. In patients with symptomatic sporadic small vessel disease, we determined which MRI parameters best correlated with cognitive function on cross-sectional analysis and which changed over a period of 1 year. Thirty-five patients with lacunar stroke and leukoaraiosis were recruited. They underwent multimodal MRI (brain volume, fluid-attenuated inversion recovery lesion load, lacunar infarct number, fractional anisotropy, and mean diffusivity from diffusion tensor imaging) and neuropsychological testing. Twenty-seven agreed to reattend for repeat MRI and neuropsychology at 1 year. An executive function score correlated most strongly with diffusion tensor imaging (fractional anisotropy histogram, r=-0.640, P=0.004) and brain volume (r=0.501, P=0.034). Associations with diffusion tensor imaging were stronger than with all other MRI parameters. On multiple regression of all imaging parameters, a model that contained brain volume and fractional anisotropy, together with age, gender, and premorbid IQ, explained 74% of the variance of the executive function score (P=0.0001). Changes in mean diffusivity and fractional anisotropy were detectable over the 1-year follow-up; in contrast, no change in other MRI parameters was detectable over this time period. A multimodal MRI model explains a large proportion of the variation in executive function in cerebral small vessel disease. In particular, diffusion tensor imaging correlates best with executive function and is the most sensitive to change. This supports the use of MRI, in particular diffusion tensor imaging, as a surrogate marker in treatment trials.

A bioassay-guided fractionation system to identify endogenous small molecules that activate plasma membrane H+-ATPase activity in Arabidopsis.

PubMed

Han, Xiuli; Yang, Yongqing; Wu, Yujiao; Liu, Xiaohui; Lei, Xiaoguang; Guo, Yan

2017-05-17

Plasma membrane (PM) H+-ATPase is essential for plant growth and development. Various environmental stimuli regulate its activity, a process that involves many protein cofactors. However, whether endogenous small molecules play a role in this regulation remains unknown. Here, we describe a bio-guided isolation method to identify endogenous small molecules that regulate PM H+-ATPase activity. We obtained crude extracts from Arabidopsis seedlings with or without salt treatment and then purified them into fractions based on polarity and molecular mass by repeated column chromatography. By evaluating the effect of each fraction on PM H+-ATPase activity, we found that fractions containing the endogenous, free unsaturated fatty acids oleic acid (C18:1), linoleic acid (C18:2), and linolenic acid (C18:3) extracted from salt-treated seedlings stimulate PM H+-ATPase activity. These results were further confirmed by the addition of exogenous C18:1, C18:2, or C18:3 in the activity assay. The ssi2 mutant, with reduced levels of C18:1, C18:2, and C18:3, displayed reduced PM H+-ATPase activity. Furthermore, C18:1, C18:2, and C18:3 directly bound to the C-terminus of the PM H+-ATPase AHA2. Collectively, our results demonstrate that the binding of free unsaturated fatty acids to the C-terminus of PM H+-ATPase is required for its activation under salt stress. The bio-guided isolation model described in this study could enable the identification of new endogenous small molecules that modulate essential protein functions, as well as signal transduction, in plants. © The Author 2017. Published by Oxford University Press on behalf of the Society for Experimental Biology.

Discovery of Peculiar Periodic Spectral Modulations in a Small Fraction of Solar-type Stars

NASA Astrophysics Data System (ADS)

Borra, Ermanno F.; Trottier, Eric

2016-11-01

A Fourier transform analysis of 2.5 million spectra in the Sloan Digital Sky Survey was carried out to detect periodic spectral modulations. Signals having the same period were found in only 234 stars overwhelmingly in the F2 to K1 spectral range. The signals cannot be caused by instrumental or data analysis effects because they are present in only a very small fraction of stars within a narrow spectral range and because signal-to-noise ratio considerations predict that the signal should mostly be detected in the brightest objects, while this is not the case. We consider several possibilities, such as rotational transitions in molecules, rapid pulsations, Fourier transform of spectral lines, and signals generated by extraterrestrial intelligence (ETI). They cannot be generated by molecules or rapid pulsations. It is highly unlikely that they come from the Fourier transform of spectral lines because too many strong lines located at nearly periodic frequencies are needed. Finally, we consider the possibility, predicted in a previous published paper, that the signals are caused by light pulses generated by ETI to makes us aware of their existence. We find that the detected signals have exactly the shape of an ETI signal predicted in the previous publication and are therefore in agreement with this hypothesis. The fact that they are only found in a very small fraction of stars within a narrow spectral range centered near the spectral type of the Sun is also in agreement with the ETI hypothesis. However, at this stage, this hypothesis needs to be confirmed with further work. Although unlikely, there is also a possibility that the signals are due to highly peculiar chemical compositions in a small fraction of galactic halo stars.

Stable isotope deltas: Tiny, yet robust signatures in nature

USGS Publications Warehouse

Brand, Willi A.; Coplen, Tyler B.

2012-01-01

Although most of them are relatively small, stable isotope deltas of naturally occurring substances are robust and enable workers in anthropology, atmospheric sciences, biology, chemistry, environmental sciences, food and drug authentication, forensic science, geochemistry, geology, oceanography, and paleoclimatology to study a variety of topics. Two fundamental processes explain the stable isotope deltas measured in most terrestrial systems: isotopic fractionation and isotope mixing. Isotopic fractionation is the result of equilibrium or kinetic physicochemical processes that fractionate isotopes because of small differences in physical or chemical properties of molecular species having different isotopes. It is shown that the mixing of radioactive and stable isotope end members can be modelled to provide information on many natural processes, including 14C abundances in the modern atmosphere and the stable hydrogen and oxygen isotopic compositions of the oceans during glacial and interglacial times. The calculation of mixing fractions using isotope balance equations with isotope deltas can be substantially in error when substances with high concentrations of heavy isotopes (e.g. 13C, 2H, and 18O ) are mixed. In such cases, calculations using mole fractions are preferred as they produce accurate mixing fractions. Isotope deltas are dimensionless quantities. In the International System of Units (SI), these quantities have the unit 1 and the usual list of prefixes is not applicable. To overcome traditional limitations with expressing orders of magnitude differences in isotope deltas, we propose the term urey (symbol Ur), after Harold C. Urey, for the unit 1. In such a manner, an isotope delta value expressed traditionally as−25 per mil can be written as−25 mUr (or−2.5 cUr or−0.25 dUr; the use of any SI prefix is possible). Likewise, very small isotopic differences often expressed in per meg ‘units’ are easily included (e.g. either+0.015 ‰ or+15 per meg can be written as+15 μUr.

Pelagic Biocarbonates: Assessing the "Forgotten" Fine Fraction

NASA Astrophysics Data System (ADS)

Brummer, G. J. A.

2016-02-01

Biocarbonates play an important role in the global carbon cycle and cover over half of the ocean floor. Biocarbonates in the open ocean are best known from planktonic foraminifera, which are relatively large (>150µm), heavy and few and coccoliths, which are very small (<32µm), light and abundant. Both of these components are relatively well studied. The size fraction in between adult foraminifera and coccoliths (32-150µm: the so-called fine fraction) consists of a large but poorly known mixture of particles, which is genarlly assumed to consist primarily of "juvenile" planktonic foraminifera, with minor amounts of calcareous dinoflagellates and various others less well-known microfossils. Abundance, diversity, mass and composition within the fine fraction are poorly constrained, as is the response to acidification/dissolution. This lack of knowledge primarily reflects the gap in size fraction studied by the different disciplinary approaches and techniques, which are not suited for identifying and quantifying these intermediate groups. Comparative ontogeny of planktonic foraminifera now shows that this fine fraction in sediments does not consist of "juveniles" as in the living plankton, but is dominated by mature specimens of small-sized species. First estimates indicate that these small species not only account for about one third of the number of species of planktonic foraminifera but also form about one third of their shell flux and global carbonate production in weight. Still, we hardly know anything on seasonality, depth habitat, shell composition (isotopes, trace metal incorporation), potential autotrophic symbionts, molecular genetics and geological range of these clearly very important species. Estimates from well-preserved sediments, show that the important role of these minute foraminiferal planktonic species may hold for much of the 180Ma long fossil record, opening a new research field pertaining to both modern and past pelagic ecosystems and the role of these species in global carbon cycles.

Manufacturing of New Welding Fluxes Using Silicomanganese Slag

NASA Astrophysics Data System (ADS)

Kryukov, Roman E.; Kozyrev, Nikolay A.; Kozyreva, Olga A.; Usoltsev, Aleksander A.

2017-10-01

There were developed the composition and manufacturing technology of new welding flux using industrial products such as slag of silicomanganese production. The effect of fractional composition on welding and fabrication characteristics was studied. It was found that using of small-sized fracture of welding flux at a rate of 30-40% decreases the oxide non-metallic impurity rating of the weld and herewith doesn’t affect its constituents. To increase technical-and-economic indexes it was suggested to mix small-sized fracture and water glass. The use of ceramic flux made by mixing the dust fraction of silicomanganese slug with fraction size less than 0.45 mm and water glass provides the decrease of non-metallic impurity rating of the weld. Herewith the increase of its content from 15 to 40% doesn’t have a significant influence on the non-metallic impurity rating of the weld and its constituents.

On the strength of random fiber networks

NASA Astrophysics Data System (ADS)

Deogekar, S.; Picu, R. C.

2018-07-01

Damage accumulation and failure in random fiber networks is of importance in a variety of applications, from design of synthetic materials, such as paper and non-wovens, to accidental tearing of biological tissues. In this work we study these processes using three-dimensional models of athermal fiber networks, focusing attention on the modes of failure and on the relationship between network strength and network structural parameters. We consider network failure at small and large strains associated with the rupture of inter-fiber bonds. It is observed that the strength increases linearly with the network volume fraction and with the bond strength, while the stretch at peak stress is inversely related to these two parameters. A small fraction of the bonds rupture before peak stress and this fraction increases with increasing failure stretch. Rendering the bond strength stochastic causes a reduction of the network strength. However, heterogeneity retards damage localization and increases the stretch at peak stress, therefore promoting ductility.

Microwave Determination of Water Mole Fraction in Humid Gas Mixtures

NASA Astrophysics Data System (ADS)

Cuccaro, R.; Gavioso, R. M.; Benedetto, G.; Madonna Ripa, D.; Fernicola, V.; Guianvarc'h, C.

2012-09-01

A small volume (65 cm3) gold-plated quasi-spherical microwave resonator has been used to measure the water vapor mole fraction x w of H2O/N2 and H2O/air mixtures. This experimental technique exploits the high precision achievable in the determination of the cavity microwave resonance frequencies and is particularly sensitive to the presence of small concentrations of water vapor as a result of the high polarizability of this substance. The mixtures were prepared using the INRIM standard humidity generator for frost-point temperatures T fp in the range between 241 K and 270 K and a commercial two-pressure humidity generator operated at a dew-point temperature between 272 K and 291 K. The experimental measurements compare favorably with the calculated molar fractions of the mixture supplied by the humidity generators, showing a normalized error lower than 0.8.

High-resolution stochastic generation of extreme rainfall intensity for urban drainage modelling applications

NASA Astrophysics Data System (ADS)

Peleg, Nadav; Blumensaat, Frank; Molnar, Peter; Fatichi, Simone; Burlando, Paolo

2016-04-01

Urban drainage response is highly dependent on the spatial and temporal structure of rainfall. Therefore, measuring and simulating rainfall at a high spatial and temporal resolution is a fundamental step to fully assess urban drainage system reliability and related uncertainties. This is even more relevant when considering extreme rainfall events. However, the current space-time rainfall models have limitations in capturing extreme rainfall intensity statistics for short durations. Here, we use the STREAP (Space-Time Realizations of Areal Precipitation) model, which is a novel stochastic rainfall generator for simulating high-resolution rainfall fields that preserve the spatio-temporal structure of rainfall and its statistical characteristics. The model enables a generation of rain fields at 102 m and minute scales in a fast and computer-efficient way matching the requirements for hydrological analysis of urban drainage systems. The STREAP model was applied successfully in the past to generate high-resolution extreme rainfall intensities over a small domain. A sub-catchment in the city of Luzern (Switzerland) was chosen as a case study to: (i) evaluate the ability of STREAP to disaggregate extreme rainfall intensities for urban drainage applications; (ii) assessing the role of stochastic climate variability of rainfall in flow response and (iii) evaluate the degree of non-linearity between extreme rainfall intensity and system response (i.e. flow) for a small urban catchment. The channel flow at the catchment outlet is simulated by means of a calibrated hydrodynamic sewer model.

U-Th-Pb and Sm-Nd Isotopic Systematics of the Goalpara Ureilite

NASA Astrophysics Data System (ADS)

Torigoye, N.; Misawa, K.; Tatsumoto, M.

1993-07-01

One of the interesting features of ureilites is the light REE-enriched component that is dissolved by HNO3 leaching [1,2]. In this work, we performed acid-leaching of several mineral fractions from Goalpara ureilite for U-Th-Pb and Sm-Nd analyses. Olivine and pyroxene grains were hand-picked from 150-300- micrometer-sized fraction. Because they still contained carbon and metal sulfide they were further crushed to <63 micrometers and metal was removed with a hand magnet. These separates and whole-rock powders were washed by ethanol, and leached in 0.01N HBr, 1N HNO3, and in some cases, 7N HNO3. Concentrations of U, Th, and Pb in residues are 0.05-0.3 ppb, 0.1-0.7 ppb, and 5-100 ppb, respectively, corresponding to <=0.01X CI chondrites. Lead isotopic compositions of the residues are less radiogenic and close to Canon Diablo troilite (CDT) Pb [3] (Fig. 1). The U-Pb and Th-Pb ages of all the fractions are older than 4.5 Ga, indicating terrestrial Pb contamination (MT). Because of low concentration of U, Th, and Pb, a small amount of Pb can have a significant effect on the U-Pb and Th-Pb model ages. 238U/204Pb (mu) value of the least contaminated residue is 3, which is higher than mu (0.14-0.5) value of carbonaceous chondrites [3,4]. The higher mu value may be due to either volatile depletion by nebula fractionation or to depletion of Pb during segregation of sulfide that occurred prior to the formation of ureilite as an ultramafic cumulate. The Sm and Nd abundances in the residues are also extremely low; 0.4-2 ppb and 1-2.5 ppb, respectively, corresponding to 0.002-0.01X CI chondritic abundances. All the residues show high 147Sm/144Nd ratios (0.23 ~ 0.44), and the fraction with the highest Sm/Nd plots on the 4.55 Ga chondritic isochron (Fig. 2). The 1N HNO3 leachates do not contain light-REE-enriched components, except for the samples containing black metal-carbon phases, which also contain a large amount of terrestrial Pb in the residual fractions. Therefore, interstitial carbon-metal phases may have adsorbed terrestrial contamination of the incompatible elements, which are significantly depleted in the ureilites. References: [1] Boynton W. V. et al. (1976) GCA ,40, 1439-1447. [2] Goodrich C. A. et al. (1991) GCA, 55, 829-848. [3] M. Tatsumoto et al. (1973) Science, 180, 1278-1283. [4] Tatsumoto M. et al. (1976) GCA, 40, 617-634.

Steady inviscid transonic flows over planar airfoils: A search for a simplified procedure

NASA Technical Reports Server (NTRS)

Magnus, R.; Yoshihara, H.

1973-01-01

A finite difference procedure based upon a system of unsteady equations in proper conservation form with either exact or small disturbance steady terms is used to calculate the steady flows over several classes of airfoils. The airfoil condition is fulfilled on a slab whose upstream extremity is a semi-circle overlaying the airfoil leading edge circle. The limitations of the small disturbance equations are demonstrated in an extreme example of a blunt-nosed, aft-cambered airfoil. The necessity of using the equations in proper conservation form to capture the shock properly is stressed. Ability of the steady relaxation procedures to capture the shock is briefly examined.

Developmental regulation of the effects of fibroblast growth factor-2 and 1-octanol on neuronogenesis: implications for a hypothesis relating to mitogen-antimitogen opposition

NASA Technical Reports Server (NTRS)

Goto, T.; Takahashi, T.; Miyama, S.; Nowakowski, R. S.; Bhide, P. G.; Caviness, V. S. Jr

2002-01-01

Neocortical neurons arise from a pseudostratified ventricular epithelium (PVE) that lies within the ventricular zone (VZ) at the margins of the embryonic cerebral ventricles. We examined the effects of fibroblast growth factor-2 (FGF-2) and 1-octanol on cell output behavior of the PVE in explants of the embryonic mouse cerebral wall. FGF-2 is mitogenic and 1-octanol antimitogenic in the PVE. Whereas all postmitotic cells migrate out of the VZ in vivo, in the explants some postmitotic cells remain within the VZ. We refer to these cells as the indeterminate or I fraction, because they neither exit from the VZ nor reenter S phase as part of the proliferative (P) fraction. They are considered to be either in an extremely prolonged G(1) phase, unable to pass the G(1)/S transition, or in the G(0) state. The I fate choice is modulated by both FGF-2 and 1-octanol. FGF-2 decreased the I fraction and increased the P fraction. In contrast, 1-octanol increased the I fraction and nearly eliminated the P fraction. The effects of FGF-2 and 1-octanol were developmentally regulated, in that they were observed in the developmentally advanced lateral region of the cerebral wall but not in the medial region. Copyright 2002 Wiley-Liss, Inc.

Fractional-order gradient descent learning of BP neural networks with Caputo derivative.

PubMed

Wang, Jian; Wen, Yanqing; Gou, Yida; Ye, Zhenyun; Chen, Hua

2017-05-01

Fractional calculus has been found to be a promising area of research for information processing and modeling of some physical systems. In this paper, we propose a fractional gradient descent method for the backpropagation (BP) training of neural networks. In particular, the Caputo derivative is employed to evaluate the fractional-order gradient of the error defined as the traditional quadratic energy function. The monotonicity and weak (strong) convergence of the proposed approach are proved in detail. Two simulations have been implemented to illustrate the performance of presented fractional-order BP algorithm on three small datasets and one large dataset. The numerical simulations effectively verify the theoretical observations of this paper as well. Copyright © 2017 Elsevier Ltd. All rights reserved.

Comparisons among MRI signs, apparent diffusion coefficient, and fractional anisotropy in dogs with a solitary intracranial meningioma or histiocytic sarcoma.

PubMed

Wada, Masae; Hasegawa, Daisuke; Hamamoto, Yuji; Yu, Yoshihiko; Fujiwara-Igarashi, Aki; Fujita, Michio

2017-07-01

Although MRI has become widely used in small animal practice, little is known about the validity of advanced MRI techniques such as diffusion-weighted imaging and diffusion tensor imaging. The aim of this retrospective analytical observational study was to investigate the characteristics of diffusion parameters, that is the apparent diffusion coefficient and fractional anisotropy, in dogs with a solitary intracranial meningioma or histiocytic sarcoma. Dogs were included based on the performance of diffusion MRI and histological confirmation. Statistical analyses were performed to compare apparent diffusion coefficient and fractional anisotropy for the two types of tumor in the intra- and peritumoral regions. Eleven cases with meningioma and six with histiocytic sarcoma satisfied the inclusion criteria. Significant differences in apparent diffusion coefficient value (× 10 -3 mm 2 /s) between meningioma vs. histiocytic sarcoma were recognized in intratumoral small (1.07 vs. 0.76) and large (1.04 vs. 0.77) regions of interest, in the peritumoral margin (0.93 vs. 1.08), and in the T2 high region (1.21 vs. 1.41). Significant differences in fractional anisotropy values were found in the peritumoral margin (0.29 vs. 0.24) and the T2 high region (0.24 vs. 0.17). The current study identified differences in measurements of apparent diffusion coefficient and fractional anisotropy for meningioma and histiocytic sarcoma in a small sample of dogs. In addition, we observed that all cases of intracranial histiocytic sarcoma showed leptomeningeal enhancement and/or mass formation invading into the sulci in the contrast study. Future studies are needed to determine the sensitivity of these imaging characteristics for differentiating between these tumor types. © 2017 American College of Veterinary Radiology.

Lyα-emitting galaxies as a probe of reionization: large-scale bubble morphology and small-scale absorbers

NASA Astrophysics Data System (ADS)

Kakiichi, Koki; Dijkstra, Mark; Ciardi, Benedetta; Graziani, Luca

2016-12-01

The visibility of Lyα-emitting galaxies during the Epoch of Reionization is controlled by both diffuse H I patches in large-scale bubble morphology and small-scale absorbers. To investigate their impacts on Lyα transfer, we apply a novel combination of analytic modelling and cosmological hydrodynamical, radiative transfer simulations to three reionization models: (I) the `bubble' model, where only diffuse H I outside ionized bubbles is present; (II) the `web' model, where H I exists only in overdense self-shielded gas; and (III) the hybrid `web-bubble' model. The three models can explain the observed Lyα luminosity function equally well, but with very different H I fractions. This confirms a degeneracy between the ionization topology of the intergalactic medium (IGM) and the H I fraction inferred from Lyα surveys. We highlight the importance of the clustering of small-scale absorbers around galaxies. A combined analysis of the Lyα luminosity function and the Lyα fraction can break this degeneracy and provide constraints on the reionization history and its topology. Constraints can be improved by analysing the full MUV-dependent redshift evolution of the Lyα fraction of Lyman break galaxies. We find that the IGM-transmission probability distribution function is unimodal for bubble models and bimodal in web models. Comparing our models to observations, we infer that the neutral fraction at z ˜ 7 is likely to be of the order of tens of per cent when interpreted with bubble or web-bubble models, with a conservative lower limit ˜1 per cent when interpreted with web models.

Modeling electro-magneto-hydrodynamic thermo-fluidic transport of biofluids with new trend of fractional derivative without singular kernel

NASA Astrophysics Data System (ADS)

Abdulhameed, M.; Vieru, D.; Roslan, R.

2017-10-01

This paper investigates the electro-magneto-hydrodynamic flow of the non-Newtonian behavior of biofluids, with heat transfer, through a cylindrical microchannel. The fluid is acted by an arbitrary time-dependent pressure gradient, an external electric field and an external magnetic field. The governing equations are considered as fractional partial differential equations based on the Caputo-Fabrizio time-fractional derivatives without singular kernel. The usefulness of fractional calculus to study fluid flows or heat and mass transfer phenomena was proven. Several experimental measurements led to conclusion that, in such problems, the models described by fractional differential equations are more suitable. The most common time-fractional derivative used in Continuum Mechanics is Caputo derivative. However, two disadvantages appear when this derivative is used. First, the definition kernel is a singular function and, secondly, the analytical expressions of the problem solutions are expressed by generalized functions (Mittag-Leffler, Lorenzo-Hartley, Robotnov, etc.) which, generally, are not adequate to numerical calculations. The new time-fractional derivative Caputo-Fabrizio, without singular kernel, is more suitable to solve various theoretical and practical problems which involve fractional differential equations. Using the Caputo-Fabrizio derivative, calculations are simpler and, the obtained solutions are expressed by elementary functions. Analytical solutions of the biofluid velocity and thermal transport are obtained by means of the Laplace and finite Hankel transforms. The influence of the fractional parameter, Eckert number and Joule heating parameter on the biofluid velocity and thermal transport are numerically analyzed and graphic presented. This fact can be an important in Biochip technology, thus making it possible to use this analysis technique extremely effective to control bioliquid samples of nanovolumes in microfluidic devices used for biological analysis and medical diagnosis.

Fate of metals contained in waste electrical and electronic equipment in a municipal waste treatment process

DOE Office of Scientific and Technical Information (OSTI.GOV)

Oguchi, Masahiro, E-mail: oguchi.masahiro@nies.go.jp; Sakanakura, Hirofumi, E-mail: sakanakura@nies.go.jp; Terazono, Atsushi, E-mail: terazono@nies.go.jp

2012-01-15

Highlights: Black-Right-Pointing-Pointer The fate of 55 metals during shredding and separation of WEEE was investigated. Black-Right-Pointing-Pointer Most metals were mainly distributed to the small-grain fraction. Black-Right-Pointing-Pointer Much of metals in WEEE being treated as municipal waste in Japan end up in landfills. Black-Right-Pointing-Pointer Pre-sorting of small digital products reduces metals to be landfilled at some level. Black-Right-Pointing-Pointer Consideration of metal recovery from other middle-sized WEEE is still important. - Abstract: In Japan, waste electrical and electronic equipment (WEEE) that is not covered by the recycling laws are treated as municipal solid waste. A part of common metals are recovered duringmore » the treatment; however, other metals are rarely recovered and their destinations are not clear. This study investigated the distribution ratios and substance flows of 55 metals contained in WEEE during municipal waste treatment using shredding and separation techniques at a Japanese municipal waste treatment plant. The results revealed that more than half of Cu and most of Al contained in WEEE end up in landfills or dissipate under the current municipal waste treatment system. Among the other metals contained in WEEE, at least 70% of the mass was distributed to the small-grain fraction through the shredding and separation and is to be landfilled. Most kinds of metals were concentrated several fold in the small-grain fraction through the process and therefore the small-grain fraction may be a next target for recovery of metals in terms of both metal content and amount. Separate collection and pre-sorting of small digital products can work as effective way for reducing precious metals and less common metals to be landfilled to some extent; however, much of the total masses of those metals would still end up in landfills and it is also important to consider how to recover and utilize metals contained in other WEEE such as audio/video equipment.« less

Fractionally charged skyrmions in fractional quantum Hall effect

DOE PAGES

Balram, Ajit C.; Wurstbauer, U.; Wójs, A.; ...

2015-11-26

The fractional quantum Hall effect has inspired searches for exotic emergent topological particles, such as fractionally charged excitations, composite fermions, abelian and nonabelian anyons and Majorana fermions. Fractionally charged skyrmions, which support both topological charge and topological vortex-like spin structure, have also been predicted to occur in the vicinity of 1/3 filling of the lowest Landau level. The fractional skyrmions, however, are anticipated to be exceedingly fragile, suppressed by very small Zeeman energies. Here we show that, slightly away from 1/3 filling, the smallest manifestations of the fractional skyrmion exist in the excitation spectrum for a broad range of Zeemanmore » energies, and appear in resonant inelastic light scattering experiments as well-defined resonances slightly below the long wavelength spin wave mode. The spectroscopy of these exotic bound states serves as a sensitive tool for investigating the residual interaction between composite fermions, responsible for delicate new fractional quantum Hall states in this filling factor region.« less

A low Lyman Continuum escape fraction of <10 per cent for extreme [O III] emitters in an overdensity at z ˜ 3.5

NASA Astrophysics Data System (ADS)

Naidu, Rohan P.; Forrest, Ben; Oesch, Pascal A.; Tran, Kim-Vy H.; Holden, Bradford P.

2018-07-01

Recent work has suggested that extreme [O III] emitting star-forming galaxies are important to reionization. Relatedly, [O III]/[O II] has been put forward as an indirect estimator of the Lyman Continuum (LyC) escape fraction (fesc) at z ≳ 4.5 when the opaque IGM renders LyC photons unobservable. Using deep archival U-band (VLT/VIMOS) imaging of a recently confirmed overdensity at z˜ 3.5, we calculate tight constraints on fesc for a sample (N = 73) dominated by extreme [O III] emitters. We find no LyC signal (f_esc^rel < 6.3^{+0.7}_{-0.7} per cent at 1σ) in a deep U-band stack of our sample (31.98 mag at 1σ). This constraint is in agreement with recent studies of star-forming galaxies spanning z ˜ 1-4 that have found very low average fesc. Despite the galaxies in our study having an estimated average rest-frame EW([O III]λ5007) ˜ 400 Å and [O III]/[O II] ˜ 4 from composite SED fitting, we find no LyC detection, which brings into question the potential of [O III]/[O II] as an effective probe of the LyC - a majority of LyC emitters have [O III]/[O II] > 3, but we establish here that [O III]/[O II] > 3 does not guarantee significant LyC leakage for a population. Since even extreme star-forming galaxies are unable to produce the f_esc˜ 10-15 per cent required by most theoretical calculations for star-forming galaxies to drive reionization, there must either be a rapid evolution of fesc between z˜ 3.5 and the epoch of reionization, or hitherto observationally unstudied sources [e.g. ultrafaint low-mass galaxies with log (M/M⊙) ˜ 7-8.5] must make an outsized contribution to reionization.

A Low Lyman Continuum Escape Fraction of <10% for Extreme [O III] Emitters in an Overdensity at z˜3.5

NASA Astrophysics Data System (ADS)

Naidu, Rohan P.; Forrest, Ben; Oesch, Pascal A.; Tran, Kim-Vy H.; Holden, Bradford P.

2018-04-01

Recent work has suggested extreme [O III] emitting star-forming galaxies are important to reionization. Relatedly, [O III]/[O II] has been put forward as an indirect estimator of the Lyman Continuum (LyC) escape fraction (fesc) at z ≳ 4.5 when the opaque IGM renders LyC photons unobservable. Using deep archival U-band (VLT/VIMOS) imaging of a recently confirmed overdensity at z ˜ 3.5 we calculate tight constraints on fesc for a sample (N=73) dominated by extreme [O III] emitters. We find no Lyman Continuum signal (f_{esc}^{rel} < 6.3^{+0.7}_{-0.7} % at 1σ) in a deep U-band stack of our sample (31.98 mag at 1σ). This constraint is in agreement with recent studies of star-forming galaxies spanning z ˜ 1 - 4 that have found very low average fesc. Despite the galaxies in our study having an estimated average rest-frame EW([O III]λ5007) ˜ 400Å and [O III]/[O II]˜4 from composite SED-fitting, we find no LyC detection, which brings into question the potential of [O III]/[O II] as an effective probe of the LyC-a majority of LyC emitters have [O III]/[O II]>3, but we establish here that [O III]/[O II]>3 does not guarantee significant LyC leakage for a population. Since even extreme star-forming galaxies are unable to produce the fesc ˜ 10 - 15% required by most theoretical calculations for star-forming galaxies to drive reionization, there must either be a rapid evolution of fesc between z ˜ 3.5 and the Epoch of Reionization, or hitherto observationally unstudied sources (e.g. ultra-faint low-mass galaxies with log (M/M⊙) ˜ 7 - 8.5) must make an outsized contribution to reionization.

Extreme Precipitation in Poland in the Years 1951-2010

NASA Astrophysics Data System (ADS)

Malinowska, Miroslawa

2017-12-01

The characteristics of extreme precipitation, including the dominant trends, were analysed for eight stations located in different parts of Poland for the period 1951-2010. Five indices enabling the assessment of the intensity and frequency of both extremely dry and wet conditions were applied. The indices included the number of days with precipitation ≥10mm·d-1 (R10), maximum number of consecutive dry days (CDD), maximum 5-day precipitation total (R5d), simple daily intensity index (SDII), and the fraction of annual total precipitation due to events exceeding the 95th percentile calculated for the period 1961-1990. Annual trends were calculated using standard linear regression method, while the fit of the model was assessed with the F-test at the 95% confidence level. The analysed changes in extreme precipitation showed mixed patterns. A significant positive trend in the number of days with precipitation ≥10mm·d-1 (R10) was observed in central Poland, while a significant negative one, in south-eastern Poland. Based on the analysis of maximum 5-day precipitation totals (R5d), statistically significant positive trends in north-western, western and eastern parts of the country were detected, while the negative trends were found in the central and northeastern parts. Daily precipitation, expressed as single daily intensity index (SDII), increased over time in northern and central Poland. In southern Poland, the variation of SDII index showed non-significant negative tendencies. Finally, the fraction of annual total precipitation due to the events exceeding the 1961-1990 95th percentile increased at one station only, namely, in Warsaw. The indicator which refers to dry conditions, i.e. maximum number of consecutive dry days (CDD) displayed negative trends throughout the surveyed area, with the exception of Szczecin that is a representative of north-western Poland.

Exploration of the aftermath of a large collision in an extreme debris disk

NASA Astrophysics Data System (ADS)

Moor, Attila; Abraham, Peter; Cataldi, Gianni; Kospal, Agnes; Pal, Andras; Vida, Krisztian

2018-05-01

Warm debris disks with extremely high fractional luminosities are exceptional, rare systems. Not explainable by steady-state evolutionary models, these extreme debris disks are believed to stem from a recent large collision of planetary embryos in the terrestrial zone. Our team recently discovered a new extreme debris disk around TYC 4209-1322-1, whose WISE W1/W2 band photometry showed a significant brightening probably related to a giant collision in the inner disk. In Cycle 13 we monitor the system by Spitzer, revealing a fading trend with an e-folding time of 1500 days with hints for a quasi-periodic modulation and a possible second smaller amplitude collision event. Here we propose to continue the monitoring campaign until the end of Cycle 14 to explore the evolution of the current long fading trend and of the second collision, and characterize the hinted modulation. Thanks to a better sampled Spitzer light curve and the unique opportunity that NASA's TESS satellite will obtain high-precision optical photometry in the same period, a new dimension will be opened in Cycle 14 in the study of one of the most spectacular extreme debris disk, scrutinizing for the first time the possible influence of stellar activity on a debris disk.

The Nustar Spectrum of Mrk 335: Extreme Relativistic Effects Within Two Gravitational Radii of the Event Horizon?

NASA Technical Reports Server (NTRS)

Parker, M. L.; Wilkins, D. R.; Fabian, A. C.; Grupe, D.; Dauser, T.; Matt, G.; Harrison, F. A.; Brenneman, L.; Boggs, S. E.; Christensen, F. E.;

Takotsubo cardiomyopathy associated with Miller-Fisher syndrome.

PubMed

Gill, Dalvir; Liu, Kan

2017-07-01

51-year-old female who presented with progressive paresthesia, numbness of the lower extremities, double vision, and trouble walking. Physical exam was remarkable for areflexia, and ptosis. Her initial EKG showed nonspecific ST segment changes and her Troponin T was elevated to 0.41ng/mL which peaked at 0.66ng/mL. Echocardiogram showed a depressed left ventricular ejection fraction to 35% with severely hypokinetic anterior wall and left ventricular apex was severely hypokinetic. EMG nerve conduction study showed severely decreased conduction velocity and prolonged distal latency in all nerves consistent with demyelinating disease. She was treated with 5days of intravenous immunoglobulin therapy to which she showed significant improvement in strength in her lower extremities. Echocardiogram repeated 4days later showing an improved left ventricular ejection fraction of 55% and no left ventricular wall motion abnormalities. Takotsubo cardiomyopathy is a rare complication of Miller-Fisher syndrome and literature review did not reveal any cases. Miller-Fisher syndrome is an autoimmune process that affects the peripheral nervous system causing autonomic dysfunction which may involve the heart. Due to significant autonomic dysfunction in Miller-Fisher syndrome, it could lead to arrhythmias, blood pressure changes, acute coronary syndrome and myocarditis, Takotsubo cardiomyopathy can be difficult to distinguish. The treatment of Takotsubo cardiomyopathy is supportive with beta-blockers and angiotensin-converting enzyme inhibitors are recommended until left ventricle ejection fraction improvement. Takotsubo cardiomyopathy is a rare complication during the acute phase of Miller-Fisher syndrome and must be distinguished from autonomic dysfunction as both diagnoses have different approaches to treatment. Published by Elsevier Inc.

Relative importance of black carbon, brown carbon, and absorption enhancement from clear coatings in biomass burning emissions

NASA Astrophysics Data System (ADS)

Pokhrel, Rudra P.; Beamesderfer, Eric R.; Wagner, Nick L.; Langridge, Justin M.; Lack, Daniel A.; Jayarathne, Thilina; Stone, Elizabeth A.; Stockwell, Chelsea E.; Yokelson, Robert J.; Murphy, Shane M.

2017-04-01

A wide range of globally significant biomass fuels were burned during the fourth Fire Lab at Missoula Experiment (FLAME-4). A multi-channel photoacoustic absorption spectrometer (PAS) measured dry absorption at 405, 532, and 660 nm and thermally denuded (250 °C) absorption at 405 and 660 nm. Absorption coefficients were broken into contributions from black carbon (BC), brown carbon (BrC), and lensing following three different methodologies, with one extreme being a method that assumes the thermal denuder effectively removes organics and the other extreme being a method based on the assumption that black carbon (BC) has an Ångström exponent of unity. The methodologies employed provide ranges of potential importance of BrC to absorption but, on average, there was a difference of a factor of 2 in the ratio of the fraction of absorption attributable to BrC estimated by the two methods. BrC absorption at shorter visible wavelengths is of equal or greater importance to that of BC, with maximum contributions of up to 92 % of total aerosol absorption at 405 nm and up to 58 % of total absorption at 532 nm. Lensing is estimated to contribute a maximum of 30 % of total absorption, but typically contributes much less than this. Absorption enhancements and the estimated fraction of absorption from BrC show good correlation with the elemental-carbon-to-organic-carbon ratio (EC / OC) of emitted aerosols and weaker correlation with the modified combustion efficiency (MCE). Previous studies have shown that BrC grows darker (larger imaginary refractive index) as the ratio of black to organic aerosol (OA) mass increases. This study is consistent with those findings but also demonstrates that the fraction of total absorption attributable to BrC shows the opposite trend: increasing as the organic fraction of aerosol emissions increases and the EC / OC ratio decreases.

Isotope source apportionment of carbonaceous aerosol as a function of particle size and thermal refractiveness

NASA Astrophysics Data System (ADS)

Masalaite, Agne; Holzinger, Rupert; Remeikis, Vidmantas; Röckmann, Thomas; Dusek, Ulrike

2016-04-01

The stable carbon isotopes can be used to get information about sources and processing of carbonaceous aerosol. We will present results from source apportionment of carbonaceous aerosol as a function of particle size thermal refractiveness. Separate source apportionment for particles smaller than 200 nm and for different carbon volatility classes are rarely reported and give new insights into aerosol sources in the urban environment. Stable carbon isotope ratios were measured for the organic carbon (OC) fraction and total carbon (TC) of MOUDI impactor samples that were collected on a coastal site (Lithuania) during the winter 2012 and in the city of Vilnius (Lithuania) during the winter of 2009. The 11 impactor stages spanned a size range from 0.056 to 18 μm, but only the 6 stages in the submicron range were analysed. The δ13C values of bulk total carbon (δ13CTC) were determined with an elemental analyser (Flash EA 1112) coupled with an isotope ratio mass spectrometer (Thermo Finnigan Delta Plus Advantage) (EA - IRMS). Meanwhile δ13COC was measured using thermal-desorption isotope ratio mass spectrometry (IRMS) system. This allows a rough separation of the more volatile OC fraction (desorbed in the oven of IRMS up to 250 0C) from the more refractory fraction (desorbed up to 400 0C). In this study we investigated the composition of organic aerosol desorbed from filter samples at different temperatures using the thermal-desorption proton-transfer-reaction mass spectrometry (TD-PTR-MS) technique. During winter-time in Lithuania we expect photochemistry and biogenic emissions to be of minor importance. The main sources of aerosol carbon should be fossil fuel and biomass combustion. In both sites, the coastal and the urban site, δ13C measurements give a clear indication that the source contributions differ for small and large particles. Small particles < 200 nm are depleted in 13C with respect to larger particles by 1 - 2 ‰Ṫhis shows that OC in small particle arises mainly from fossil fuel sources, whereas OC in larger particles from 200 nm to 1 μm has higher contribution from biomass burning/other sources. Moreover, there is a clear distinction in source contribution between the more volatile OC fraction and the more refractory fraction. The more refractory fraction is enriched in 13C by 1 to 2 ‰ for both small and large particles. These results show that the fossil fuel combustion is associated to a larger degree with more volatile carbon, whereas biomass burning is the main source of the more refractory particles. According to our source apportionment, the more volatile carbon fraction in the smallest particles is almost completely from fossil fuels, whereas the more refractory carbon fraction in the large size range is almost complete from biomass burning. The more refractory small particles and the less refractory large particles are roughly an even mix of these two sources. The detailed chemical speciation of the carbonaceous aerosol will be presented as well. Acknowledgements This study was funded by the Dutch Science Foundation (NWO grants Nr. 820.01.001, and 834.08.002).

Variety of RNAs in Peripheral Blood Cells, Plasma, and Plasma Fractions

PubMed Central

Kuligina, Elena V.; Bariakin, Dmitry N.; Kozlov, Vadim V.; Richter, Vladimir A.; Semenov, Dmitry V.

2017-01-01

Human peripheral blood contains RNA in cells and in extracellular membrane vesicles, microvesicles and exosomes, as well as in cell-free ribonucleoproteins. Circulating mRNAs and noncoding RNAs, being internalized, possess the ability to modulate vital processes in recipient cells. In this study, with SOLiD sequencing technology, we performed identification, classification, and quantification of RNAs from blood fractions: cells, plasma, plasma vesicles pelleted at 16,000g and 160,000g, and vesicle-depleted plasma supernatant of healthy donors and non-small cell lung cancer (NSCLC) patients. It was determined that 16,000g blood plasma vesicles were enriched with cell-free mitochondria and with a set of mitochondrial RNAs. The variable RNA set of blood plasma 160,000g pellets reflected the prominent contribution of U1, U5, and U6 small nuclear RNAs' fragments and at the same time was characterized by a remarkable depletion of small nucleolar RNAs. Besides microRNAs, the variety of fragments of mRNAs and snoRNAs dominated in the set of circulating RNAs differentially expressed in blood fractions of NSCLC patients. Taken together, our data emphasize that not only extracellular microRNAs but also circulating fragments of messenger and small nuclear/nucleolar RNAs represent prominent classes of circulating regulatory ncRNAs as well as promising circulating biomarkers for the development of disease diagnostic approaches. PMID:28127559

A Simple, Efficient and Effective Modeling Approach to Determine Baseflow Based on Concentration-Discharge Relationships

NASA Astrophysics Data System (ADS)

Liu, F.; Miller, M. P.; Conklin, M. H.

2017-12-01

Concentration-discharge relationships in streamflow are a precursor for diagnosing endmember mixing. With a strong power-law relationship between concentration and discharge, previous studies have shown that conservative solute concentrations in streamflow can be explained by mixing of two endmembers, i.e., quick runoff (QR) and baseflow (BF). This current study showed that the unique concentration-discharge power-law curve provides two characteristic values of solute concentrations at extremely high and low flows and these envelope values can be used to aid two-endmember mixing models. In an example conducted in the Upper Colorado River Basin (UCRB), daily specific conductance (SC) and discharge were strongly correlated by a power-law function on both rising and falling limbs from 1983 to 2015 (R2 > 0.9 for all years). The high envelope SC value in each year was directly used to characterize baseflow for that year, while the low envelope SC value was adjusted to represent quick runoff, a collective term for surface runoff and responsive shallow subsurface runoff. The peak flow was considered to be dominated by QR with only a small portion of BF. The ratio of minimum to maximum flows was used to calibrate the low envelope SC value. This ratio represents the least fraction of baseflow to total flow at the peak flow, as baseflow increases with total flow based on published studies. The SC value at the peak flow was considered to be a mixture of QR and BF with the minimum/maximum flow ratio as baseflow fraction and thus SC value in QR was determined with a mass balance equation. The baseflow fractions determined in two-endmember mixing models by this characterization of QR from 1983 to 2011 match those by Miller et al. [2014] very well (R2 = 0.96, slope = 1.07, intercept = -0.13). Baseflow fractions were slightly under-estimated by this approach mainly due to the fact that responsive shallow subsurface runoff was considered to be part of quick flow in this study rather than part of baseflow. This approach provides a simple, efficient and effective modeling tool for estimating baseflow without requiring any samples from endmembers in catchments with a strong power-law relation.

Evaluation of the SMAP model calculated snow albedo at the SIGMA-A site, northwest Greenland, during the 2012 record surface melt event

NASA Astrophysics Data System (ADS)

Niwano, M.; Aoki, T.; Matoba, S.; Yamaguchi, S.; Tanikawa, T.; Kuchiki, K.; Motoyama, H.

2015-12-01

The snow and ice on the Greenland ice sheet (GrIS) experienced the extreme surface melt around 12 July, 2012. In order to understand the snow-atmosphere interaction during the period, we applied a physical snowpack model SMAP to the GrIS snowpack. In the SMAP model, the snow albedo is calculated by the PBSAM component explicitly considering effects of snow grain size and light-absorbing snow impurities such as black carbon and dust. Temporal evolution of snow grain size is calculated internally in the SMAP model, whereas mass concentrations of snow impurities are externally given from observations. In the PBSAM, the (shortwave) snow albedo is calculated from a weighted summation of visible albedo (primarily affected by snow impurities) and near-infrared albedo (mainly controlled by snow grain size). The weights for these albedos are the visible and near-infrared fractions of the downward shortwave radiant flux. The SMAP model forced by meteorological data obtained from an automated weather station at SIGMA-A site, northwest GrIS during 30 June to 14 July, 2012　(IOP) was evaluated in terms of surface (optically equivalent) snow grain size and snow albedo. Snow grain size simulated by the model was compared against that retrieved from in-situ spectral albedo measurements. Although the RMSE and ME were reasonable (0.21 mm and 0.17 mm, respectively), the small snow grain size associated with the surface hoar could not be simulated by the SMAP model. As for snow albedo, simulation results agreed well with observations throughout the IOP (RMSE was 0.022 and ME was 0.008). Under cloudy-sky conditions, the SMAP model reproduced observed rapid increase in the snow albedo. When cloud cover is present the near-infrared fraction of the downward shortwave radiant flux is decreased, while it is increased under clear-sky conditions. Therefore, the above mentioned performance of the SMAP model can be attributed to the PBSAM component driven by the observed near-infrared and visible fractions of the downward shortwave radiant flux. This result suggests that it is necessary for snowpack models to consider changes in the visible and near-infrared fractions of the downward shortwave radiant flux caused by the presence of cloud cover to reproduce realistic temporal changes in the snow albedo and consequently the surface energy balance.

Short-time self-diffusion coefficient of a particle in a colloidal suspension bounded by a microchannel: Virial expansions and simulation

NASA Astrophysics Data System (ADS)

Kȩdzierski, Marcin; Wajnryb, Eligiusz

2011-10-01

Self-diffusion of colloidal particles confined to a cylindrical microchannel is considered theoretically and numerically. Virial expansion of the self-diffusion coefficient is performed. Two-body and three-body hydrodynamic interactions are evaluated with high precision using the multipole method. The multipole expansion algorithm is also used to perform numerical simulations of the self-diffusion coefficient, valid for all possible particle packing fractions. Comparison with earlier results shows that the widely used method of reflections is insufficient for calculations of hydrodynamic interactions even for small packing fractions and small particles radii, contrary to the prevalent opinion.

Emissions from small-scale energy production using co-combustion of biofuel and the dry fraction of household waste.

PubMed

Hedman, Björn; Burvall, Jan; Nilsson, Calle; Marklund, Stellan

2005-01-01

In sparsely populated rural areas, recycling of household waste might not always be the most environmentally advantageous solution due to the total amount of transport involved. In this study, an alternative approach to recycling has been tested using efficient small-scale biofuel boilers for co-combustion of biofuel and high-energy waste. The dry combustible fraction of source-sorted household waste was mixed with the energy crop reed canary-grass (Phalaris Arundinacea L.), and combusted in both a 5-kW pilot scale reactor and a biofuel boiler with 140-180 kW output capacity, in the form of pellets and briquettes, respectively. The chlorine content of the waste fraction was 0.2%, most of which originated from plastics. The HCl emissions exceeded levels stipulated in new EU-directives, but levels of equal magnitude were also generated from combustion of the pure biofuel. Addition of waste to the biofuel did not give any apparent increase in emissions of organic compounds. Dioxin levels were close to stipulated limits. With further refinement of combustion equipment, small-scale co-combustion systems have the potential to comply with emission regulations.

Introducing the refined gravity hypothesis of extreme sexual size dimorphism

PubMed Central

2010-01-01

Background Explanations for the evolution of female-biased, extreme Sexual Size Dimorphism (SSD), which has puzzled researchers since Darwin, are still controversial. Here we propose an extension of the Gravity Hypothesis (i.e., the GH, which postulates a climbing advantage for small males) that in conjunction with the fecundity hypothesis appears to have the most general power to explain the evolution of SSD in spiders so far. In this "Bridging GH" we propose that bridging locomotion (i.e., walking upside-down under own-made silk bridges) may be behind the evolution of extreme SSD. A biomechanical model shows that there is a physical constraint for large spiders to bridge. This should lead to a trade-off between other traits and dispersal in which bridging would favor smaller sizes and other selective forces (e.g. fecundity selection in females) would favor larger sizes. If bridging allows faster dispersal, small males would have a selective advantage by enjoying more mating opportunities. We predicted that both large males and females would show a lower propensity to bridge, and that SSD would be negatively correlated with sexual dimorphism in bridging propensity. To test these hypotheses we experimentally induced bridging in males and females of 13 species of spiders belonging to the two clades in which bridging locomotion has evolved independently and in which most of the cases of extreme SSD in spiders are found. Results We found that 1) as the degree of SSD increased and females became larger, females tended to bridge less relative to males, and that 2) smaller males and females show a higher propensity to bridge. Conclusions Physical constraints make bridging inefficient for large spiders. Thus, in species where bridging is a very common mode of locomotion, small males, by being more efficient at bridging, will be competitively superior and enjoy more mating opportunities. This "Bridging GH" helps to solve the controversial question of what keeps males small and also contributes to explain the wide range of SSD in spiders, as those spider species in which extreme SSD has not evolved but still live in tall vegetation, do not use bridging locomotion to disperse. PMID:20682029

Lipophilic fractions from the marine sponge Halichondria sitiens decrease secretion of pro-inflammatory cytokines by dendritic cells and decrease their ability to induce a Th1 type response by allogeneic CD4+ T cells.

PubMed

Di, Xiaxia; Oskarsson, Jon T; Omarsdottir, Sesselja; Freysdottir, Jona; Hardardottir, Ingibjorg

2017-12-01

Halichondria (Halichondriidae) marine sponges contain components possessing various biological activities, but immunomodulation is not among the ones reported. This study evaluated the immunomodulatory effects of fractions/compounds from Halichondria sitiens Schmidt. Crude dichloromethane/methanol extracts of H. sitiens were subjected to various chromatographic techniques to obtain fractions/compounds with immunomodulatory activity, using bioassay-guided isolation. The effects of the fractions/compounds were determined by measuring secretion of cytokines and expression of surface molecules by dendritic cells (DCs) and their ability to stimulate and modify cytokine secretion by allogeneic CD4 + T cells. The bioactive fractions were chemically analyzed to identify the immunomodulatory constituents by 1D, 2D NMR, and HRMS data. Several lipophilic fractions from H. sitiens at 10 μg/mL decreased secretion of the pro-inflammatory cytokines IL-12p40 and IL-6 by the DCs, with maximum inhibition being 64% and 25%, respectively. In addition, fractions B3b3F and B3b3J decreased the ability of DCs to induce T cell secretion of IFN-γ. Fraction B3b3 induced morphological changes in DCs, characterized by extreme elongation of dendrites and cell clustering. Chemical screening revealed the presence of glycerides and some minor unknown constituents in the biologically active fractions. One new glyceride, 2,3-dihydroxypropyl 2-methylhexadecanoate (1), was isolated from one fraction and two known compounds, 3-[(1-methoxyhexadecyl)oxy]propane-1,2-diol (2) and monoheptadecanoin (3), were identified in another, but none of them had immunomodulatory activity. These results demonstrate that several lipophilic fractions from H. sitiens have anti-inflammatory effects on DCs and decrease their ability to induce a Th1 type immune response.

Biological Effects of Acoustic Cavitation

DTIC Science & Technology

1985-06-15

call attention to four important ones: Ter Haar et.al. (25-26] have irradiated live guinea pig legs with therapeutic ultrasound while examining the...eggs and larvae * at various stages in their development with pulsed ultrasound . They have determined that when gas-containing trachea developed in...the organisms, they were extremely suceptable to the ultrasound and large fractions could - be killedý Hemmingsen et.al. [30-311 have observed bubble

A DIETHER ANALOG OF PHOSPHATIDYL GLYCEROPHOSPHATE IN HALOBACTERIUM CUTIRUBRUM,

DTIC Science & Technology

The major phosphatide in the extremely halophilic bacterium, Halobacterium cutirubrum, was isolated by a combination of solvent fractionation...precipitation through the barium salt, and final purification as the sodium salt. Analytical and degradative data showed the phosphatide to be a...phosphatidyl glycerophosphate with two long-chain ether groups instead of fatty acid ester groups. Both long-chain groups were found to be identical and were

The first effects of fluid inertia on flows in ordered and random arrays of spheres

NASA Astrophysics Data System (ADS)

Hill, Reghan J.; Koch, Donald L.; Ladd, Anthony J. C.

2001-12-01

Theory and lattice-Boltzmann simulations are used to examine the effects of fluid inertia, at small Reynolds numbers, on flows in simple cubic, face-centred cubic and random arrays of spheres. The drag force on the spheres, and hence the permeability of the arrays, is determined at small but finite Reynolds numbers, at solid volume fractions up to the close-packed limits of the arrays. For small solid volume fraction, the simulations are compared to theory, showing that the first inertial contribution to the drag force, when scaled with the Stokes drag force on a single sphere in an unbounded fluid, is proportional to the square of the Reynolds number. The simulations show that this scaling persists at solid volume fractions up to the close-packed limits of the arrays, and that the first inertial contribution to the drag force relative to the Stokes-flow drag force decreases with increasing solid volume fraction. The temporal evolution of the spatially averaged velocity and the drag force is examined when the fluid is accelerated from rest by a constant average pressure gradient toward a steady Stokes flow. Theory for the short- and long-time behaviour is in good agreement with simulations, showing that the unsteady force is dominated by quasi-steady drag and added-mass forces. The short- and long-time added-mass coefficients are obtained from potential-flow and quasi-steady viscous-flow approximations, respectively.

HI-bearing Ultra Diffuse Galaxies in the ALFALFA Survey

NASA Astrophysics Data System (ADS)

Leisman, Lukas; Janowiecki, Steven; Jones, Michael G.; ALFALFA Almost Darks Team

2018-01-01

The Arecibo Legacy Fast ALFA (Arecibo L-band Feed Array) extragalactic HI survey, with over 30,000 high significance extragalactic sources, is well positioned to locate gas-bearing, low surface brightness sources missed by optical detection algorithms. We investigate the nature of a population of HI-bearing sources in ALFALFA with properties similar to "ultra-diffuse" galaxies (UDGs): galaxies with stellar masses of dwarf galaxies, but radii of L* galaxies. These "HI-bearing ultra-diffuse" sources (HUDS) constitute a small, but pertinent, fraction of the dwarf-mass galaxies in ALFALFA. They are bluer and have more irregular morphologies than the optically-selected UDGs found in clusters, and they appear to be gas-rich for their stellar mass, indicating low star formation efficiency. To illuminate potential explanations for the extreme properties of these sources we explore their environments and estimate their halo properties. We conclude that environmental mechanism are unlikely the cause of HUDS' properties, as they exist in environments equivalent to that of the other ALFALFA sources of similar HI-masses, however, we do find some suggestion that these HUDS may reside in high spin parameter halos, a potential explanation for their "ultra-diffuse" nature.

A low-energy core-collapse supernova without a hydrogen envelope.

PubMed

Valenti, S; Pastorello, A; Cappellaro, E; Benetti, S; Mazzali, P A; Manteca, J; Taubenberger, S; Elias-Rosa, N; Ferrando, R; Harutyunyan, A; Hentunen, V P; Nissinen, M; Pian, E; Turatto, M; Zampieri, L; Smartt, S J

2009-06-04

The final fate of massive stars depends on many factors. Theory suggests that some with initial masses greater than 25 to 30 solar masses end up as Wolf-Rayet stars, which are deficient in hydrogen in their outer layers because of mass loss through strong stellar winds. The most massive of these stars have cores which may form a black hole and theory predicts that the resulting explosion of some of them produces ejecta of low kinetic energy, a faint optical luminosity and a small mass fraction of radioactive nickel. An alternative origin for low-energy supernovae is the collapse of the oxygen-neon core of a star of 7-9 solar masses. No weak, hydrogen-deficient, core-collapse supernovae have hitherto been seen. Here we report that SN 2008ha is a faint hydrogen-poor supernova. We propose that other similar events have been observed but have been misclassified as peculiar thermonuclear supernovae (sometimes labelled SN 2002cx-like events). This discovery could link these faint supernovae to some long-duration gamma-ray bursts, because extremely faint, hydrogen-stripped core-collapse supernovae have been proposed to produce such long gamma-ray bursts, the afterglows of which do not show evidence of associated supernovae.

Random pinning elucidates the nature of melting transition in two-dimensional core-softened potential system

NASA Astrophysics Data System (ADS)

Tsiok, E. N.; Fomin, Y. D.; Ryzhov, V. N.

2018-01-01

Despite about forty years of investigations, the nature of the melting transition in two dimensions is not completely clear. In the framework of the most popular Berezinskii-Kosterlitz-Thouless-Halperin-Nelson-Young (BKTHNY) theory, 2D systems melt through two continuous Berezinskii-Kosterlitz-Thouless (BKT) transitions with intermediate hexatic phase. The conventional first-order transition is also possible. On the other hand, recently on the basis of computer simulations the new melting scenario was proposed with continuous BKT type solid-hexatic transition and first order hexatic-liquid transition. However, in the simulations the hexatic phase is extremely narrow that makes its study difficult. In the present paper, we propose to apply the random pinning to investigate the hexatic phase in more detail. The results of molecular dynamics simulations of two dimensional system having core-softened potentials with narrow repulsive step which is similar to the soft disk system are outlined. The system has a small fraction of pinned particles giving quenched disorder. Random pinning widens the hexatic phase without changing the melting scenario and gives the possibility to study the behavior of the diffusivity and order parameters in the vicinity of the melting transition and inside the hexatic phase.

H2-rich fluids from serpentinization: geochemical and biotic implications.

PubMed

Sleep, N H; Meibom, A; Fridriksson, Th; Coleman, R G; Bird, D K

2004-08-31

Metamorphic hydration and oxidation of ultramafic rocks produces serpentinites, composed of serpentine group minerals and varying amounts of brucite, magnetite, and/or FeNi alloys. These minerals buffer metamorphic fluids to extremely reducing conditions that are capable of producing hydrogen gas. Awaruite, FeNi3, forms early in this process when the serpentinite minerals are Fe-rich. Olivine with the current mantle Fe/Mg ratio was oxidized during serpentinization after the Moon-forming impact. This process formed some of the ferric iron in the Earth's mantle. For the rest of Earth's history, serpentinites covered only a small fraction of the Earth's surface but were an important prebiotic and biotic environment. Extant methanogens react H2 with CO2 to form methane. This is a likely habitable environment on large silicate planets. The catalytic properties of FeNi3 allow complex organic compounds to form within serpentinite and, when mixed with atmospherically produced complex organic matter and waters that circulated through basalts, constitutes an attractive prebiotic substrate. Conversely, inorganic catalysis of methane by FeNi3 competes with nascent and extant life. Copyright 2004 The National Academy of Sciencs of the USA

Effects of communication burstiness on consensus formation and tipping points in social dynamics

NASA Astrophysics Data System (ADS)

Doyle, C.; Szymanski, B. K.; Korniss, G.

2017-06-01

Current models for opinion dynamics typically utilize a Poisson process for speaker selection, making the waiting time between events exponentially distributed. Human interaction tends to be bursty though, having higher probabilities of either extremely short waiting times or long periods of silence. To quantify the burstiness effects on the dynamics of social models, we place in competition two groups exhibiting different speakers' waiting-time distributions. These competitions are implemented in the binary naming game and show that the relevant aspect of the waiting-time distribution is the density of the head rather than that of the tail. We show that even with identical mean waiting times, a group with a higher density of short waiting times is favored in competition over the other group. This effect remains in the presence of nodes holding a single opinion that never changes, as the fraction of such committed individuals necessary for achieving consensus decreases dramatically when they have a higher head density than the holders of the competing opinion. Finally, to quantify differences in burstiness, we introduce the expected number of small-time activations and use it to characterize the early-time regime of the system.

Effect of Scandium on the Interaction of Concurrent Precipitation and Recrystallization in Commercial AA3003 Aluminum Alloy

NASA Astrophysics Data System (ADS)

Tu, Yiyou; Qian, Huan; Zhou, Xuefeng; Jiang, Jianqing

2014-04-01

In the current study, the effect of Sc addition on the interaction of concurrent precipitation and recrystallization in commercial AA3003 aluminum alloy was investigated using optical microscopy, scanning electron microscopy, and transmission electron microscopy. In case of AA3003 alloy, which was cold rolled to a true strain of 2.20 and heated at a heating rate of 150 K/s, the onset of precipitation and ending of recrystallization are signified by the critical temperature, T C ~740 K (467 °C). There is a change in the shape of the recrystallized grains from pancake-like to equiaxed shape, as the annealing temperature increases greater than T C. In case of AA3003 alloy microalloyed with 0.4 wt pct of Sc, the high no. density precipitation of coherent Al3Sc precipitates always occurs before recrystallization because of the small nucleation barrier and high rate of decomposition. This leads to extremely coarse pancake-like recrystallization grains with high fraction of low-angle grain boundaries in the entire annealing temperature range, even at a high brazing temperature of 883 K (610 °C).

Modeling genome coverage in single-cell sequencing

PubMed Central

Daley, Timothy; Smith, Andrew D.

2014-01-01

Motivation: Single-cell DNA sequencing is necessary for examining genetic variation at the cellular level, which remains hidden in bulk sequencing experiments. But because they begin with such small amounts of starting material, the amount of information that is obtained from single-cell sequencing experiment is highly sensitive to the choice of protocol employed and variability in library preparation. In particular, the fraction of the genome represented in single-cell sequencing libraries exhibits extreme variability due to quantitative biases in amplification and loss of genetic material. Results: We propose a method to predict the genome coverage of a deep sequencing experiment using information from an initial shallow sequencing experiment mapped to a reference genome. The observed coverage statistics are used in a non-parametric empirical Bayes Poisson model to estimate the gain in coverage from deeper sequencing. This approach allows researchers to know statistical features of deep sequencing experiments without actually sequencing deeply, providing a basis for optimizing and comparing single-cell sequencing protocols or screening libraries. Availability and implementation: The method is available as part of the preseq software package. Source code is available at http://smithlabresearch.org/preseq. Contact: andrewds@usc.edu Supplementary information: Supplementary material is available at Bioinformatics online. PMID:25107873

DOE Office of Scientific and Technical Information (OSTI.GOV)

Bučík, Radoslav; Innes, Davina E.; Mason, Glenn M.

Small, {sup 3}He-rich solar energetic particle (SEP) events have been commonly associated with extreme-ultraviolet (EUV) jets and narrow coronal mass ejections (CMEs) that are believed to be the signatures of magnetic reconnection, involving field lines open to interplanetary space. The elemental and isotopic fractionation in these events are thought to be caused by processes confined to the flare sites. In this study, we identify 32 {sup 3}He-rich SEP events observed by the Advanced Composition Explorer , near the Earth, during the solar minimum period 2007–2010, and we examine their solar sources with the high resolution Solar Terrestrial Relations Observatory (more » STEREO ) EUV images. Leading the Earth, STEREO -A has provided, for the first time, a direct view on {sup 3}He-rich flares, which are generally located on the Sun’s western hemisphere. Surprisingly, we find that about half of the {sup 3}He-rich SEP events in this survey are associated with large-scale EUV coronal waves. An examination of the wave front propagation, the source-flare distribution, and the coronal magnetic field connections suggests that the EUV waves may affect the injection of {sup 3}He-rich SEPs into interplanetary space.« less

High Efficiency Wideband Refractive Optics for ALMA Band-1 (35-52 GHz). Design, Implementation, and Measurement Results

NASA Astrophysics Data System (ADS)

Tapia, V.; González, A.; Finger, R.; Mena, F. P.; Monasterio, D.; Reyes, N.; Sánchez, M.; Bronfman, L.

2017-03-01

We present the design, implementation, and characterization of the optics of ALMA Band 1, the lowest frequency band in the most advanced radio astronomical telescope. Band 1 covers the broad frequency range from 35 to 50 GHz, with the goal of minor degradation up to 52 GHz. This is, up to now, the largest fractional bandwidth of all ALMA bands. Since the optics is the first subsystem of any receiver, low noise figure and maximum aperture efficiency are fundamental for best sensitivity. However, a conjunction of several factors (small cryostat apertures, mechanical constraints, and cost limitations) makes extremely challenging to achieve these goals. To overcome these problems, the optics presented here includes two innovative solutions, a compact optimized-profile corrugated horn and a modified Fresnel lens. The horn profile was optimized for optimum performance and easy fabrication by a single-piece manufacturing process in a lathe. In this way, manufacturability is eased when compared with traditional fabrication methods. To minimize the noise contribution of the optics, a one-step zoned lens was designed. Its parameters were carefully optimized to maximize the frequency coverage and reduce losses. The optical assembly reported here fully complies with ALMA specifications.

DIFFICULTY IN THE FORMATION OF COUNTER-ORBITING HOT JUPITERS FROM NEAR-COPLANAR HIERARCHICAL TRIPLE SYSTEMS: A SUB-STELLAR PERTURBER

DOE Office of Scientific and Technical Information (OSTI.GOV)

Xue, Yuxin; Suto, Yasushi, E-mail: yuxin@utap.phys.s.u-tokyo.ac.jp

2016-03-20

Among 100 transiting planets with a measured projected spin–orbit angle λ, several systems are suggested to be counter-orbiting. While these cases may be due to the projection effect, the mechanism that produces a counter-orbiting planet has not been established. A promising scenario for counter-orbiting planets is the extreme eccentricity evolution in near-coplanar hierarchical triple systems with eccentric inner and outer orbits. We examine this scenario in detail by performing a series of systematic numerical simulations, and consider the possibility of forming hot Jupiters (HJs), especially a counter-orbiting one under this mechanism with a distant sub-stellar perturber. We incorporate quadrupole andmore » octupole secular gravitational interaction between the two orbits, and also short-range forces (correction for general relativity, star and inner planetary tide, and rotational distortion) simultaneously. We find that most systems are tidally disrupted and that a small fraction of the surviving planets turn out to be prograde. The formation of counter-orbiting HJs in this scenario is possible only in a very restricted parameter region, and thus is very unlikely in practice.« less

PROSPECTS FOR MEASURING THE MASS OF BLACK HOLES AT HIGH REDSHIFTS WITH RESOLVED KINEMATICS USING GRAVITATIONAL LENSING

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hezaveh, Yashar D.

2014-08-20

Application of the most robust method of measuring black hole masses, spatially resolved kinematics of gas and stars, is presently limited to nearby galaxies. The Atacama Large Millimeter/sub-millimeter Array (ALMA) and 30m class telescopes (the Thirty Meter Telescope, the Giant Magellan Telescope, and the European Extremely Large Telescope) with milli-arcsecond resolution are expected to extend such measurements to larger distances. Here, we study the possibility of exploiting the angular magnification provided by strong gravitational lensing to measure black hole masses at high redshifts (z ∼ 1-6), using resolved gas kinematics with these instruments. We show that in ∼15% and ∼20%more » of strongly lensed galaxies, the inner 25 and 50 pc could be resolved, allowing the mass of ≳ 10{sup 8} M {sub ☉} black holes to be dynamically measured with ALMA, if moderately bright molecular gas is present at these small radii. Given the large number of strong lenses discovered in current millimeter surveys and future optical surveys, this fraction could constitute a statistically significant population for studying the evolution of the M-σ relation at high redshifts.« less

Anaerobic wastewater treatment and membrane filtration: a one night stand or a sustainable relationship?

PubMed

Jeison, D; van Lier, J B

2008-01-01

Several anaerobic membrane bioreactors (AnMBR) were operated, under various conditions, applying different reactor configurations. Applicable fluxes were strongly determined by the physical properties of the sludge present in the reactors. Results show that particle size is a key determining factor for the attainable fluxes. Under thermophilic conditions, small sludge particle size was observed, resulting in low critical fluxes reaching 6-7 L/m2h for the submerged configuration and acidified substrate. In contrast, under mesophilic conditions critical fluxes of 20 L/m2h were obtained. The acidification level also showed a strong effect. Under thermophilic conditions, the presence of a significant fraction of non-acidified organic matter induced the growth of suspended acidogenic biomass that seriously affected the applicable fluxes, both in submerged and side-stream configurations. Under all conditions tested cake formation showed to be the limiting factor determining the applicable fluxes. Only low levels of irreversible fouling were observed. Due to technical and economical considerations, most interesting perspectives for the application of AnMBR are expected with the treatment of high-strength particulate wastewaters, and with extreme wastewaters characterised by high temperature, salinity, etc.

Fine resolution chronology based on initial Sr-87/Sr-86

NASA Technical Reports Server (NTRS)

Stewart, B. W.; Papanastassiou, D. A.; Capo, R. C.; Wasserburg, G. J.

1993-01-01

It has been recognized that small variations in initial Sr-87/Sr-86 (Sr(sub I)), can provide a fine scale relative chronology for the chemical fractionation of materials with low Rb/Sr from parent reservoirs with high Rb/Sr. Similarly, Sr(sub I), as determined for low Rb/Sr phases in meteorites, may permit a fine resolution chronology of the recrystallization or metamorphism of planetary materials. For the establishment of a primitive Sr-87/Sr-86 chronology, it is important to search for samples with extremely low Rb/Sr for which the measured Sr-87/Sr-86 is below BABI, in which case the primitive nature of the Sr can be directly established. Using the measured Rb/Sr to calculate an initial Sr-87/Sr-86 can introduce substantial uncertainty if the Rb-Sr are disturbed. We report Sr-87/Sr-86 in plagioclase from silicate pebbles from the Vaca Muerta mesosiderite on which we have reported Sm-147-Nd-143 and Ne-142 correlations. For the purpose of cross-calibration with our previous work we have performed extensive new measurements on Angra dos Reis and on anorthite from Moore County, which have very low Rb/Sr and primitive Sr-87/Sr-86.

Trends in Gender Differences in Academic Achievement from 1960 to 1994: An Analysis of Differences in Mean, Variance, and Extreme Scores.

ERIC Educational Resources Information Center

Nowell, Amy; Hedges, Larry V.

1998-01-01

Uses evidence from seven surveys of the U.S. 12th-grade population and the National Assessment of Educational Progress to show that gender differences in mean and variance in academic achievement are small from 1960 to 1994 but that differences in extreme scores are often substantial. (SLD)

The cell size and distribution of adipocytes from subcutaneous and visceral fat is associated with type 2 diabetes mellitus in humans.

PubMed

Fang, Lingling; Guo, Fangjian; Zhou, Lihua; Stahl, Richard; Grams, Jayleen

2015-01-01

Regional deposition of adipose tissue and adipocyte morphology may contribute to increased risk for insulin resistance. The aim of this study was to compare adipocyte cell size and size distribution from multiple fat depots and to determine the association with type 2 diabetes mellitus, anthropomorphic data, and subjects' metabolic profile. Clinical data and adipose tissue from subcutaneous fat, omentum, and mesentery were collected from 30 subjects with morbid obesity. Adipocytes were isolated by collagenase digestion and sized by microscopic measurement of cell diameter. Overall, adipocytes from subcutaneous fat were larger than those from omentum or mesentery. For the subcutaneous and omental fat depots, there was a significant increase in % small cells (14.9% vs 31.4%, p = 0 .006 and 14.0% vs 30.5%, p = 0 .015, respectively) and corresponding decrease in % large cells for nondiabetic vs diabetic patients. There was a similar trend for mesentery but it did not reach statistical significance (p = 0 .090). For omentum and mesentery, there was also a significant decrease in the diameter of the small cells. Fasting glucose was positively correlated with fraction of small cells in omentum and mesentery, and HbA1C was positively correlated with fraction of small cells in the omental fat depot. There was no correlation between large cell diameter with clinical parameters in any of the fat depots. These results indicate size distribution of adipocytes, specifically an increase in the fraction of small cells, is associated with the presence of type 2 diabetes mellitus.

The cell size and distribution of adipocytes from subcutaneous and visceral fat is associated with type 2 diabetes mellitus in humans

PubMed Central

Fang, Lingling; Guo, Fangjian; Zhou, Lihua; Stahl, Richard; Grams, Jayleen

2015-01-01

Aims/hypothesis: Regional deposition of adipose tissue and adipocyte morphology may contribute to increased risk for insulin resistance. The aim of this study was to compare adipocyte cell size and size distribution from multiple fat depots and to determine the association with type 2 diabetes mellitus, anthropomorphic data, and subjects' metabolic profile. Methods: Clinical data and adipose tissue from subcutaneous fat, omentum, and mesentery were collected from 30 subjects with morbid obesity. Adipocytes were isolated by collagenase digestion and sized by microscopic measurement of cell diameter. Results: Overall, adipocytes from subcutaneous fat were larger than those from omentum or mesentery. For the subcutaneous and omental fat depots, there was a significant increase in % small cells (14.9% vs 31.4%, p = 0 .006 and 14.0% vs 30.5%, p = 0 .015, respectively) and corresponding decrease in % large cells for nondiabetic vs diabetic patients. There was a similar trend for mesentery but it did not reach statistical significance (p = 0 .090). For omentum and mesentery, there was also a significant decrease in the diameter of the small cells. Fasting glucose was positively correlated with fraction of small cells in omentum and mesentery, and HbA1C was positively correlated with fraction of small cells in the omental fat depot. There was no correlation between large cell diameter with clinical parameters in any of the fat depots. Conclusions/interpretation: These results indicate size distribution of adipocytes, specifically an increase in the fraction of small cells, is associated with the presence of type 2 diabetes mellitus. PMID:26451283

Adenovirus Virus-Associated RNAII-Derived Small RNAs Are Efficiently Incorporated into the RNA-Induced Silencing Complex and Associate with Polyribosomes▿ §

PubMed Central

Xu, Ning; Segerman, Bo; Zhou, Xiaofu; Akusjärvi, Göran

2007-01-01

Adenovirus type 5 encodes two highly structured short RNAs, the virus-associated (VA) RNAI and RNAII. Both are processed by Dicer into small RNAs that are incorporated into the RNA-induced silencing complex (RISC). We show here, by cloning of small RNAs, that approximately 80% of Ago2-containing RISC immunopurified from late-infected cells is associated with VA RNA-derived small RNAs (mivaRNAs). Most surprisingly, VA RNAII, which is expressed at 20-fold lower levels compared to that of VA RNAI, appears to be the preferred substrate for Dicer and accounts for approximately 60% of all small RNAs in RISC. The mivaRNAs are derived from the 3′ strand of the terminal stems of the VA RNAs, with the major fraction of VA RNAII starting at position 138. The small RNAs derived from VA RNAI were more heterogeneous in size, with the two predominant small RNAs starting at positions 137 and 138. Collectively, our results suggest that the mivaRNAs are efficiently used for RISC assembly in late-infected cells. Potentially, they function as miRNAs, regulating translation of cellular mRNAs. In support of this hypothesis, we detected a fraction of the VA RNAII-derived mivaRNAs on polyribosomes. PMID:17652395

Adenovirus virus-associated RNAII-derived small RNAs are efficiently incorporated into the rna-induced silencing complex and associate with polyribosomes.

PubMed

Xu, Ning; Segerman, Bo; Zhou, Xiaofu; Akusjärvi, Göran

2007-10-01

Adenovirus type 5 encodes two highly structured short RNAs, the virus-associated (VA) RNAI and RNAII. Both are processed by Dicer into small RNAs that are incorporated into the RNA-induced silencing complex (RISC). We show here, by cloning of small RNAs, that approximately 80% of Ago2-containing RISC immunopurified from late-infected cells is associated with VA RNA-derived small RNAs (mivaRNAs). Most surprisingly, VA RNAII, which is expressed at 20-fold lower levels compared to that of VA RNAI, appears to be the preferred substrate for Dicer and accounts for approximately 60% of all small RNAs in RISC. The mivaRNAs are derived from the 3' strand of the terminal stems of the VA RNAs, with the major fraction of VA RNAII starting at position 138. The small RNAs derived from VA RNAI were more heterogeneous in size, with the two predominant small RNAs starting at positions 137 and 138. Collectively, our results suggest that the mivaRNAs are efficiently used for RISC assembly in late-infected cells. Potentially, they function as miRNAs, regulating translation of cellular mRNAs. In support of this hypothesis, we detected a fraction of the VA RNAII-derived mivaRNAs on polyribosomes.

Solar Eclipse Video Captured by STEREO-B

NASA Technical Reports Server (NTRS)

2007-01-01

No human has ever witnessed a solar eclipse quite like the one captured on this video. The NASA STEREO-B spacecraft, managed by the Goddard Space Center, was about a million miles from Earth , February 25, 2007, when it photographed the Moon passing in front of the sun. The resulting movie looks like it came from an alien solar system. The fantastically-colored star is our own sun as STEREO sees it in four wavelengths of extreme ultraviolet light. The black disk is the Moon. When we observe a lunar transit from Earth, the Moon appears to be the same size as the sun, a coincidence that produces intoxicatingly beautiful solar eclipses. The silhouette STEREO-B saw, on the other hand, was only a fraction of the Sun. The Moon seems small because of the STEREO-B location. The spacecraft circles the sun in an Earth-like orbit, but it lags behind Earth by one million miles. This means STEREO-B is 4.4 times further from the Moon than we are, and so the Moon looks 4.4 times smaller. This version of the STEREO-B eclipse movie is a composite of data from the coronagraph and extreme ultraviolet imager of the spacecraft. STEREO-B has a sister ship named STEREO-A. Both are on a mission to study the sun. While STEREO-B lags behind Earth, STEREO-A orbits one million miles ahead ('B' for behind, 'A' for ahead). The gap is deliberate as it allows the two spacecraft to capture offset views of the sun. Researchers can then combine the images to produce 3D stereo movies of solar storms. The two spacecraft were launched in Oct. 2006 and reached their stations on either side of Earth in January 2007.

Oxygen isotope compositions of selected laramide-tertiary granitoid stocks in the Colorado Mineral Belt and their bearing on the origin of climax-type granite-molybdenum systems

USGS Publications Warehouse

Hannah, J.L.; Stein, H.J.

1986-01-01

Quartz phenocrysts from 31 granitoid stocks in the Colorado Mineral Belt yield ??18O values less than 10.4???, with most values between 9.3 and 10.4???. An average magmatic value of about 8.5??? is suggested. The stocks resemble A-type granites; these data support magma genesis by partial melting of previously depleted, fluorine-enriched, lower crustal granulites, followed by extreme differentiation and volatile evolution in the upper crust. Subsolidus interaction of isotopically light water with stocks has reduced most feldspar and whole rock ??18O values. Unaltered samples from Climax-type molybdenumbearing granites, however, show no greater isotopic disturbance than samples from unmineralized stocks. Although meteoric water certainly played a role in post-mineralization alteration, particularly in feldspars, it is not required during high-temperature mineralization processes. We suggest that slightly low ??18O values in some vein and replacement minerals associated with molybdenum mineralization may have resulted from equilibration with isotopically light magmatic water and/or heavy isotope depletion of the ore fluid by precipitation of earlier phases. Accumulation of sufficient quantities of isotopically light magmatic water to produce measured depletions of 18O requires extreme chemical stratification in a large magma reservoir. Upward migration of a highly fractionated, volatile-rich magma into a small apical Climax-type diapir, including large scale transport of silica, alkalis, molybdenum, and other vapor soluble elements, may occur with depression of the solidus temperature and reduction of magma viscosity by fluorine. Climax-type granites may provide examples of 18O depletion in magmatic systems without meteoric water influx. ?? 1986 Springer-Verlag.

Evaluation of the Impact of Ambient Temperatures on Occupational Injuries in Spain.

PubMed

Martínez-Solanas, Èrica; López-Ruiz, María; Wellenius, Gregory A; Gasparrini, Antonio; Sunyer, Jordi; Benavides, Fernando G; Basagaña, Xavier

2018-06-01

Extreme cold and heat have been linked to an increased risk of occupational injuries. However, the evidence is still limited to a small number of studies of people with relatively few injuries and with a limited geographic extent, and the corresponding economic effect has not been studied in detail. We assessed the relationship between ambient temperatures and occupational injuries in Spain along with its economic effect. The daily number of occupational injuries that caused at least one day of leave and the daily maximum temperature were obtained for each Spanish province for the years 1994-2013. We estimated temperature-injuries associations with distributed lag nonlinear models, and then pooled the results using a multivariate meta-regression model. We calculated the number of injuries attributable to cold and heat, the corresponding workdays lost, and the resulting economic effect. The study included 15,992,310 occupational injuries. Overall, 2.72% [95% confidence interval (CI): 2.44-2.97] of all occupational injuries were attributed to nonoptimal ambient temperatures, with moderate heat accounting for the highest fraction. This finding corresponds to an estimated 0.67 million (95% CI: 0.60-0.73) person-days of work lost every year in Spain due to temperature, or an annual average of 42 d per 1,000 workers. The estimated annual economic burden is €370 million, or 0.03% of Spain's GDP (€2,015). Our findings suggest that extreme ambient temperatures increased the risk of occupational injuries, with substantial estimated health and economic costs. These results call for public health interventions to protect workers in the context of climate change. https://doi.org/10.1289/EHP2590.

The remarkable outburst of the highly evolved post-period-minimum dwarf nova SSS J122221.7-311525★

NASA Astrophysics Data System (ADS)

Neustroev, V. V.; Marsh, T. R.; Zharikov, S. V.; Knigge, C.; Kuulkers, E.; Osborne, J. P.; Page, K. L.; Steeghs, D.; Suleimanov, V. F.; Tovmassian, G.; Breedt, E.; Frebel, A.; García-Díaz, Ma. T.; Hambsch, F.-J.; Jacobson, H.; Parsons, S. G.; Ryu, T.; Sabin, L.; Sjoberg, G.; Miroshnichenko, A. S.; Reichart, D. E.; Haislip, J. B.; Ivarsen, K. M.; LaCluyze, A. P.; Moore, J. P.

2017-05-01

We report extensive 3-yr multiwavelength observations of the WZ Sge-type dwarf nova SSS J122221.7-311525 during its unusual double superoutburst, the following decline and in quiescence. The second segment of the superoutburst had a long duration of 33 d and a very gentle decline with a rate of 0.02 mag d-1, and it displayed an extended post-outburst decline lasting at least 500 d. Simultaneously with the start of the rapid fading from the superoutburst plateau, the system showed the appearance of a strong near-infrared excess resulting in very red colours, which reached extreme values (B - I ≃ 1.4) about 20 d later. The colours then became bluer again, but it took at least 250 d to acquire a stable level. Superhumps were clearly visible in the light curve from our very first time-resolved observations until at least 420 d after the rapid fading from the superoutburst. The spectroscopic and photometric data revealed an orbital period of 109.80 min and a fractional superhump period excess ≲0.8 per cent, indicating a very low mass ratio q ≲ 0.045. With such a small mass ratio the donor mass should be below the hydrogen-burning minimum mass limit. The observed infrared flux in quiescence is indeed much lower than is expected from a cataclysmic variable with a near-main-sequence donor star. This strongly suggests a brown-dwarf-like nature for the donor and that SSS J122221.7-311525 has already evolved away from the period minimum towards longer periods, with the donor now extremely dim.

Unusual broad-line Mg II emitters among luminous galaxies in the baryon oscillation spectroscopic survey

DOE Office of Scientific and Technical Information (OSTI.GOV)

Roig, Benjamin; Blanton, Michael R.; Ross, Nicholas P.

2014-02-01

Many classes of active galactic nuclei (AGNs) have been observed and recorded since the discovery of Seyfert galaxies. In this paper, we examine the sample of luminous galaxies in the Baryon Oscillation Spectroscopic Survey. We find a potentially new observational class of AGNs, one with strong and broad Mg II λ2799 line emission, but very weak emission in other normal indicators of AGN activity, such as the broad-line Hα, Hβ, and the near-ultraviolet AGN continuum, leading to an extreme ratio of broad Hα/Mg II flux relative to normal quasars. Meanwhile, these objects' narrow-line flux ratios reveal AGN narrow-line regions withmore » levels of activity consistent with the Mg II fluxes and in agreement with that of normal quasars. These AGN may represent an extreme case of the Baldwin effect, with very low continuum and high equivalent width relative to typical quasars, but their ratio of broad Mg II to broad Balmer emission remains very unusual. They may also be representative of a class of AGN where the central engine is observed indirectly with scattered light. These galaxies represent a small fraction of the total population of luminous galaxies (≅ 0.1%), but are more likely (about 3.5 times) to have AGN-like nuclear line emission properties than other luminous galaxies. Because Mg II is usually inaccessible for the population of nearby galaxies, there may exist a related population of broad-line Mg II emitters in the local universe which is currently classified as narrow-line emitters (Seyfert 2 galaxies) or low ionization nuclear emission-line regions.« less

Controlling Emergent Ferromagnetism at Complex Oxide Interfaces

NASA Astrophysics Data System (ADS)

Grutter, Alexander

The emergence of complex magnetic ground states at ABO3 perovskite heterostructure interfaces is among the most promising routes towards highly tunable nanoscale materials for spintronic device applications. Despite recent progress, isolating and controlling the underlying mechanisms behind these emergent properties remains a highly challenging materials physics problems. In particular, generating and tuning ferromagnetism localized at the interface of two non-ferromagnetic materials is of fundamental and technological interest. An ideal model system in which to study such effects is the CaRuO3/CaMnO3 interface, where the constituent materials are paramagnetic and antiferromagnetic in the bulk, respectively. Due to small fractional charge transfer to the CaMnO3 (0.07 e-/Mn) from the CaRuO3, the interfacial Mn ions are in a canted antiferromagnetic state. The delicate balance between antiferromagnetic superexchange and ferromagnetic double exchange results in a magnetic ground state which is extremely sensitive to perturbations. We exploit this sensitivity to achieve control of the magnetic interface, tipping the balance between ferromagnetic and antiferromagnetic interactions through octahedral connectivity modification. Such connectivity effects are typically tightly confined to interfaces, but by targeting a purely interfacial emergent magnetic system, we achieve drastic alterations to the magnetic ground state. These results demonstrate the extreme sensitivity of the magnetic state to the magnitude of the charge transfer, suggesting the potential for direct electric field control. We achieve such electric field control through direct back gating of a CaRuO3/CaMnO3 bilayer. Thus, the CaRuO3/CaMnO3 system provides new insight into how charge transfer, interfacial symmetry, and electric fields may be used to control ferromagnetism at the atomic scale.

Vigorous star formation in a bulge-dominated extremely red object at z= 1.34

NASA Astrophysics Data System (ADS)

Cotter, Garret; Simpson, Chris; Bolton, Rosemary C.

2005-06-01

We present near-infrared (near-IR) spectroscopy of three extremely red objects (EROs) using the OHS/CISCO spectrograph at the Subaru Telescope. One target exhibits a strong emission line, which we identify as Hα at z= 1.34. Using new and existing ground-based optical and near-IR imaging, and archival Hubble Space Telescope imaging, we argue that this target is essentially an elliptical galaxy, with an old stellar population of around 4 × 1011Msolar, but having a dust-enshrouded star-forming component with a star formation rate (SFR) of some 50-100Msolar yr-1. There is no evidence that the galaxy contains an active galactic nucleus. Analysis of a further two targets, which do not exhibit any features in our near-IR spectra, suggests that one is a quiescent galaxy in the redshift range 1.2 < z < 1.6, but that the other cannot be conclusively categorized as either star-forming or quiescent. Even though our first target has many of the properties of an old elliptical, the ongoing star formation means that it cannot have formed all of its stellar population at high redshift. While we cannot infer any robust values for the SFR in ellipticals at z > 1 from this one object, we argue that the presence of an object with such a high SFR in such a small sample suggests that a non-negligible fraction of the elliptical galaxy population may have formed a component of their stellar population at redshifts z~ 1-2. We suggest that this is evidence for ongoing star formation in the history of elliptical galaxies.

The Influence of Altering Push Force Effectiveness on Upper Extremity Demand during Wheelchair Propulsion

PubMed Central

Rankin, Jeffery W.; Kwarciak, Andrew M.; Richter, W. Mark; Neptune, Richard R.

2010-01-01

Manual wheelchair propulsion has been linked to a high incidence of overuse injury and pain in the upper extremity, which may be caused by the high load requirements and low mechanical efficiency of the task. Previous studies have suggested that poor mechanical efficiency may be due to a low effective handrim force (i.e. applied force that is not directed tangential to the handrim). As a result, studies attempting to reduce upper extremity demand have used various measures of force effectiveness (e.g. fraction effective force, FEF) as a guide for modifying propulsion technique, developing rehabilitation programs and configuring wheelchairs. However, the relationship between FEF and upper extremity demand is not well understood. The purpose of this study was to use forward dynamics simulations of wheelchair propulsion to determine the influence of FEF on upper extremity demand by quantifying individual muscle stress, work and handrim force contributions at different values of FEF. Simulations maximizing and minimizing FEF resulted in higher average muscle stresses (23% and 112%) and total muscle work (28% and 71%) compared to a nominal FEF simulation. The maximal FEF simulation also shifted muscle use from muscles crossing the elbow to those at the shoulder (e.g. rotator cuff muscles), placing greater demand on shoulder muscles during propulsion. The optimal FEF value appears to represent a balance between increasing push force effectiveness to increase mechanical efficiency and minimizing upper extremity demand. Thus, care should be taken in using force effectiveness as a metric to reduce upper extremity demand. PMID:20674921

SU-C-BRA-01: Interactive Auto-Segmentation for Bowel in Online Adaptive MRI-Guided Radiation Therapy by Using a Multi-Region Labeling Algorithm

DOE Office of Scientific and Technical Information (OSTI.GOV)

Lu, Y; Chen, I; Kashani, R

Purpose: In MRI-guided online adaptive radiation therapy, re-contouring of bowel is time-consuming and can impact the overall time of patients on table. The study aims to auto-segment bowel on volumetric MR images by using an interactive multi-region labeling algorithm. Methods: 5 Patients with locally advanced pancreatic cancer underwent fractionated radiotherapy (18–25 fractions each, total 118 fractions) on an MRI-guided radiation therapy system with a 0.35 Tesla magnet and three Co-60 sources. At each fraction, a volumetric MR image of the patient was acquired when the patient was in the treatment position. An interactive two-dimensional multi-region labeling technique based on graphmore » cut solver was applied on several typical MRI images to segment the large bowel and small bowel, followed by a shape based contour interpolation for generating entire bowel contours along all image slices. The resulted contours were compared with the physician’s manual contouring by using metrics of Dice coefficient and Hausdorff distance. Results: Image data sets from the first 5 fractions of each patient were selected (total of 25 image data sets) for the segmentation test. The algorithm segmented the large and small bowel effectively and efficiently. All bowel segments were successfully identified, auto-contoured and matched with manual contours. The time cost by the algorithm for each image slice was within 30 seconds. For large bowel, the calculated Dice coefficients and Hausdorff distances (mean±std) were 0.77±0.07 and 13.13±5.01mm, respectively; for small bowel, the corresponding metrics were 0.73±0.08and 14.15±4.72mm, respectively. Conclusion: The preliminary results demonstrated the potential of the proposed algorithm in auto-segmenting large and small bowel on low field MRI images in MRI-guided adaptive radiation therapy. Further work will be focused on improving its segmentation accuracy and lessening human interaction.« less

The trophic role of mesozooplankton at 47°N, 20°W during the North Atlantic Bloom Experiment

NASA Astrophysics Data System (ADS)

Dam, Hans G.; Miller, Carolyn A.; Jonasdottir, Sigrun H.

The biomass and grazing rates of three size classes of mesozooplankton—0.2-0.5 mm (small), 0.5-1.0 mm (medium) and 1.0-2.0 mm (large)—were quantified in the vicinity of 47°N, 20°W, from 25 April to 7 May (leg 4) and from 18 to 31 May 1989 (leg 5) as part of the North Atlantic Bloom Experiment (NABE) of the Joint Global Ocean Flux Study (JGOFS). Biomass was inversely related to body size, with the small size fraction accounting for > 50% of the entire mesozooplankton biomass. Diel differences in biomass, however, were directly related to body size, indicating that vertical migration became more pronounced as the size of the animals increased. Total zooplankton biomass increased by almost a factor of 3 from the beginning to the end of the study. The average carbon-weight of individuals increased six-fold from leg 4 to leg 5 of the study. Carbon-specific rates of phytoplankton ingestion were (1) inversely related to body size; (2) greater at night for all size fractions; and (3) generally greater on leg 4 than on leg 5, particularly for the small size fraction. Grazing was dominated by the small size fraction (66% of the total grazing) on leg 4 and by the medium size fraction (44% of the total grazing) on leg 5. The removal of the daily primary production by mesozooplankton was not different from leg 4 to leg 5, averaging 2.7% day -1 (range 0.6-5.2% day -1). Comparisons of (1) estimated metabolic rates and (2) measured nitrogen excretion rates with daily rations of carbon and nitrogen, respectively, for zooplankton suggest that a phytoplankton diet only contributed about 50% of the daily carbon and nitrogen rations of animals. We hypothesize that mesozooplankton fecal pellets contributed < 5% of the POC flux out of the euphotic zone measured with particle traps. However, we estimate that during leg 5, the active flux of dissolved nitrogen out of the euphotic zone due to mesozooplankton diel vertical migration was 26% of the passive PON flux.

PAHs in water and surface sediments from Douro River estuary and Porto Atlantic coast (Portugal)-impacts on human health.

PubMed

Rocha, Maria João; Dores-Sousa, José Luís; Cruzeiro, Catarina; Rocha, Eduardo

2017-08-01

This study investigated the presence of 16 priority polycyclic aromatic compounds (PAHs) in waters from the Douro River estuary and nearby Atlantic seacoast, which both bath the Porto metropolis. In the area, there is an oil refinery, an important harbour, an intense maritime traffic, small marinas and highly inhabited cities. For the analysis of PAHs, water samples were taken from four sampling sites, at six different times of the year (2011), and extracted by solid-phase extraction (dissolved fraction) and by ultrasound technique (suspended fraction), before their quantification by gas chromatography-mass spectrometry. Results not only proved the ubiquitous distribution of all analysed PAHs in the present habitat, but also that their global amounts (∑ 16 PAHs) were extremely high at all sampling sites. Their average concentrations attained ≈ 55 ng/L and ≈ 52 μg/g dry weight (dw), respectively, in water and surface sediments. Accordingly, the surveyed area was classified as highly polluted by these organics and so, in view of the concentrations, mutagenic/carcinogenic responses in both humans and aquatic animals are possible to occur. The percentages of carcinogenic PAHs for humans (group 1) dissolved in water and in surface sediments were ca. 5 and 6%, respectively. These results are the first reported in the area and can be used as a baseline for future control of the PAHs levels locally while serving the building of global scenarios of PAHs pollution in Europe. Graphical abstract Percentage of PAHs, from different categories acordingly to WHO (2016), in both surface sediments and surface waters from Douro River estuary and Porto Atlantic seacoast; group 1 - carcinogenic, group 2A - probably carcinogenic, group 2B - possibly carcinogenic, and group 3 - not classifiable as carcinogenic to humans.

Critical analysis of the discrepancy between V(beta) and V(ss) for drugs exhibiting different two-compartment disposition profiles.

PubMed

Sobol, Eyal; Bialer, Meir

2005-03-01

It is well known that in the two-compartment open body model the values of apparent volume of distribution (V(beta)) and volume of distribution at steady state (V(ss)) are never identical. There are at least two conditions when V(beta) significantly overestimates V(ss). The first is when most of a drug is eliminated relatively rapidly but a small fraction of the dose persists and gives rise to an extremely long half-life. The second is when a drug is rapidly cleared from the central compartment with a short half-life. The primary purpose of the current paper was to investigate how different two-compartment disposition profiles affect the magnitude of difference between V(beta) and V(ss). Novel equations have been developed that relate the V(beta)/V(ss) ratio to f1 (fraction of drug elimination associated with the distributive phase) and to beta/alpha (ratio of the exponential coefficients). This paper demonstrates mathematically that an increasing value of f1 is associated with a greater divergence between V(beta) and V(ss). A similar relationship was also found for the divergence between the terminal half-life (t(1/2beta)) and the mean residence time (MRT). An increase in the beta/alpha ratio results in a substantial decrease of this discrepancy and provides a maximal possible value, or an upper limit to the V(beta)/V(ss) ratio. The newly derived equations along with their graphical presentation may serve as an excellent predictive tool for checking the accuracy of the experimentally obtained values of V(beta) and V(ss). Copyright 2004 John Wiley & Sons, Ltd.

Dynamical Effects of Stellar Companions

NASA Astrophysics Data System (ADS)

Naoz, Smadar

2016-10-01

The fraction of stellar binaries in the field is extremely high (about 40% - 70% forM > 1M⊙ stars), and thus, given this frequency, a high fraction of all exoplanetary systems may reside in binaries. While close-in giant planets tend to be found preferentially in binary stellar systems it seems that the frequency of giant planets in close binaries (>100-1000 AU) is significantly lower than in the overall population. Stellar companions gravitational perturbations may significantly alter the planetary orbits around their partner on secular timescales. They can drive planets to large eccentric orbits which can either result in plunging these planets into the star or shrinking their orbits and forming short period planets. These planets typically are misaligned with the parent star.

Bio oil synthesis by coupling biological biomass pretreatment and catalytic hydroliquefaction process.

PubMed

Hamieh, S; Beauchet, R; Lemee, L; Toufaily, J; Koubaissy, B; Hamieh, T; Pouilloux, Y; Pinard, L

2014-03-01

The bio-oil synthesis from a mixture of wastes (7wt.% straw, 38wt.% wood, and 45wt.% grass) was carried out by direct liquefaction reaction using Raney Nickel as catalyst and tetralin as solvent. The green wastes were biologically degraded during 3 months. Longer the destructuration time; higher the yield into oil is. Biological pretreatment of green wastes promotes the liquefaction process. Among the components of degraded biomass, Humin, the major fraction (60-80wt.%) that was favored by the biological treatment, yields to a bio oil extremely energetic with a HHV close to biopetroleum (40MJ kg(-1)), contrariwise, Fulvic acids (2-12wt.%), the minor fraction is refractory to liquefaction reaction. Copyright © 2014 Elsevier Ltd. All rights reserved.

Assessment of mitral regurgitation in dogs: comparison of results of echocardiography with magnetic resonance imaging.

PubMed

Sargent, J; Connolly, D J; Watts, V; Mõtsküla, P; Volk, H A; Lamb, C R; Fuentes, V Luis

2015-11-01

Echocardiography is used routinely to assess mitral regurgitation severity, but echocardiographic measures of mitral regurgitation in dogs have not been compared with other quantitative methods. The study aim was to compare echocardiographic measures of mitral regurgitation with cardiac magnetic resonance imaging-derived mitral regurgitant fraction in small-breed dogs. Dogs with myxomatous mitral valve disease scheduled for magnetic resonance imaging assessment of neurological disease were recruited. Correlations were tested between cardiac magnetic resonance imaging-derived mitral regurgitant fraction and the following echocardiographic measures: vena contracta/aortic diameter, transmitral E-wave velocity, amplitude of mitral prolapse/aortic diameter, diastolic left ventricular diameter:aortic diameter, left atrium:aortic diameter, mitral regurgitation jet area ratio and regurgitant fraction calculated using the proximal isovelocity surface area method. Measurement of cardiac magnetic resonance imaging-derived mitral regurgitant fraction was attempted in 21 dogs. Twelve consecutive, complete studies were obtained and 10 dogs were included in the final analysis: vena contracta/aortic diameter (r = 0 · 89, p = 0 · 001) and E-wave velocity (r = 0 · 86, p = 0 · 001) had the strongest correlations with cardiac magnetic resonance imaging-derived mitral regurgitant fraction. E velocity had superior repeatability and could be measured in all dogs. The presence of multiple jets precluded vena contracta/aortic diameter measurement in one dog. Measurement of cardiac magnetic resonance imaging-derived mitral regurgitant fraction is feasible but technically demanding. The echocardiographic measures that correlated most closely with cardiac magnetic resonance imaging-derived mitral regurgitant fraction were vena contracta/aortic diameter and E-wave velocity. © 2015 British Small Animal Veterinary Association.

Numerical Investigation on Absorption Enhancement of Black Carbon Aerosols Partially Coated With Nonabsorbing Organics

NASA Astrophysics Data System (ADS)

Zhang, Xiaolin; Mao, Mao; Yin, Yan; Wang, Bin

2018-01-01

This study numerically evaluates the effects of aerosol microphysics, including coated volume fraction of black carbon (BC), shell/core ratio, and size distribution, on the absorption enhancement (Eab) of polydisperse BC aggregates partially coated by organics, which is calculated by the exact multiple-sphere T-matrix method. The coated volume fraction of BC plays a substantial role in determining the absorption enhancement of partially coated BC aggregates, which typically have an Eab in the range of 1.0-2.0 with a larger value for larger coated volume fraction of BC as the shell/core ratio, BC geometry, and size distribution are fixed. The shell/core ratio, BC geometry, and size distribution have little impact on the Eab of coated BC with small coated volume fraction of BC, while they become significant for large coated volume fraction of BC. The Eab of partially coated BC particles can be slightly less than 1.0 for the large BC in the accumulation mode exhibiting large shell/core ratio and small coated volume fraction of BC, indicating that the absorption shows even slight decrease relative to uncoated BC particles. For partially coated BC aggregates in the accumulation and coarse modes, the refractive index uncertainties of BC result in the Eab differences of less than 9% and 2%, respectively, while those of organics can induce larger variations with the maximum differences up to 22% and 18%, respectively. Our study indicates that accounting for particle coating microphysics, particularly the coated volume fraction of BC, can potentially help to understand the differences in observations of largely variable absorption enhancements over various regions.

Identification of a Novel Small Cysteine-Rich Protein in the Fraction from the Biocontrol Fusarium oxysporum Strain CS-20 that Mitigates Fusarium Wilt Symptoms and Triggers Defense Responses in Tomato

PubMed Central

Shcherbakova, Larisa A.; Odintsova, Tatyana I.; Stakheev, Alexander A.; Fravel, Deborah R.; Zavriev, Sergey K.

2016-01-01

The biocontrol effect of the non-pathogenic Fusarium oxysporum strain CS-20 against the tomato wilt pathogen F. oxysporum f. sp. lycopersici (FOL) has been previously reported to be primarily plant-mediated. This study shows that CS-20 produces proteins, which elicit defense responses in tomato plants. Three protein-containing fractions were isolated from CS-20 biomass using size exclusion chromatography. Exposure of seedling roots to one of these fractions prior to inoculation with pathogenic FOL strains significantly reduced wilt severity. This fraction initiated an ion exchange response in cultured tomato cells resulting in a reversible alteration of extracellular pH; increased tomato chitinase activity, and induced systemic resistance by enhancing PR-1 expression in tomato leaves. Two other protein fractions were inactive in seedling protection. The main polypeptide (designated CS20EP), which was specifically present in the defense-inducing fraction and was not detected in inactive protein fractions, was identified. The nucleotide sequence encoding this protein was determined, and its complete amino acid sequence was deduced from direct Edman degradation (25 N-terminal amino acid residues) and DNA sequencing. The CS20EP was found to be a small basic cysteine-rich protein with a pI of 9.87 and 23.43% of hydrophobic amino acid residues. BLAST search in the NCBI database showed that the protein is new; however, it displays 48% sequence similarity with a hypothetical protein FGSG_10784 from F. graminearum strain PH-1. The contribution of CS20EP to elicitation of tomato defense responses resulting in wilt mitigating is discussed. PMID:26779237

Regioselective Synthesis of Cellulose Ester Homopolymers

Treesearch

Daiqiang Xu; Kristen Voiges; Thomas Elder; Petra Mischnick; Kevin J. Edgar

2012-01-01

Regioselective synthesis of cellulose esters is extremely difficult due to the small reactivity differences between cellulose hydroxyl groups, small differences in steric demand between acyl moieties of interest, and the difficulty of attaching and detaching many protecting groups in the presence of cellulose ester moieties without removing the ester groups. Yet the...

Particles, particles everywhere: What is in the air we breathe?

USDA-ARS?s Scientific Manuscript database

Particulate matter (PM) air pollution consists of extremely small particles, some so small that they can directly enter the bloodstream through the lungs. PM is of prime concern from both health and environmental perspectives. Current research is focused on understanding how PM forms in the atmosphe...

Compilation of 1985 annual reports of the Navy elf (extremely low frequency) communications system ecological monitoring program. Volume 2. Tabs D-G. Annual progress report, January-December 1985

DOE Office of Scientific and Technical Information (OSTI.GOV)

Band, R.N.; Snider, R.J.; Snider, R.M.

1986-07-01

This volume consists of the following reports: Soil Amoeba; Soil and Litter Arthropoda and Earthworm Studies; Biological Studies on Pollinating Insects: Megachilid Bees; Small Vertebrates: Small Mammals and Nesting Birds.

Changes and Attribution of Extreme Precipitation in Climate Models: Subdaily and Daily Scales

NASA Astrophysics Data System (ADS)

Zhang, W.; Villarini, G.; Scoccimarro, E.; Vecchi, G. A.

2017-12-01

Extreme precipitation events are responsible for numerous hazards, including flooding, soil erosion, and landslides. Because of their significant socio-economic impacts, the attribution and projection of these events is of crucial importance to improve our response, mitigation and adaptation strategies. Here we present results from our ongoing work.In terms of attribution, we use idealized experiments [pre-industrial control experiment (PI) and 1% per year increase (1%CO2) in atmospheric CO2] from ten general circulation models produced under the Coupled Model Intercomparison Project Phase 5 (CMIP5) and the fraction of attributable risk to examine the CO2 effects on extreme precipitation at the sub-daily and daily scales. We find that the increased CO2 concentration substantially increases the odds of the occurrence of sub-daily precipitation extremes compared to the daily scale in most areas of the world, with the exception of some regions in the sub-tropics, likely in relation to the subsidence of the Hadley Cell. These results point to the large role that atmospheric CO2 plays in extreme precipitation under an idealized framework. Furthermore, we investigate the changes in extreme precipitation events with the Community Earth System Model (CESM) climate experiments using the scenarios consistent with the 1.5°C and 2°C temperature targets. We find that the frequency of annual extreme precipitation at a global scale increases in both 1.5°C and 2°C scenarios until around 2070, after which the magnitudes of the trend become much weaker or even negative. Overall, the frequency of global annual extreme precipitation is similar between 1.5°C and 2°C for the period 2006-2035, and the changes in extreme precipitation in individual seasons are consistent with those for the entire year. The frequency of extreme precipitation in the 2°C experiments is higher than for the 1.5°C experiment after the late 2030s, particularly for the period 2071-2100.

Extremophiles in Household Water Heaters

NASA Astrophysics Data System (ADS)

Wilpiszeski, R.; House, C. H.

2016-12-01

A significant fraction of Earth's microbial diversity comes from species living in extreme environments, but natural extreme environments can be difficult to access. Manmade systems like household water heaters serve as an effective proxy for thermophilic environments that are otherwise difficult to sample directly. As such, we are investigating the biogeography, taxonomic distribution, and evolution of thermophiles growing in domestic water heaters. Citizen scientists collected hot tap water culture- and filter- samples from 101 homes across the United States. We recovered a single species of thermophilic heterotroph from culture samples inoculated from water heaters across the United States, Thermus scotoductus. Whole-genome sequencing was conducted to better understand the distribution and evolution of this single species. We have also sequenced hyper-variable regions of the 16S rRNA gene from whole-community filter samples to identify the broad diversity and distribution of microbial cells captured from each water heater. These results shed light on the processes that shape thermophilic populations and genomes at a spatial resolution that is difficult to access in naturally occurring extreme ecosystems.

Complexity-aware simple modeling.

PubMed

Gómez-Schiavon, Mariana; El-Samad, Hana

2018-02-26

Mathematical models continue to be essential for deepening our understanding of biology. On one extreme, simple or small-scale models help delineate general biological principles. However, the parsimony of detail in these models as well as their assumption of modularity and insulation make them inaccurate for describing quantitative features. On the other extreme, large-scale and detailed models can quantitatively recapitulate a phenotype of interest, but have to rely on many unknown parameters, making them often difficult to parse mechanistically and to use for extracting general principles. We discuss some examples of a new approach-complexity-aware simple modeling-that can bridge the gap between the small-scale and large-scale approaches. Copyright © 2018 Elsevier Ltd. All rights reserved.

Instability of Poiseuille flow at extreme Mach numbers: linear analysis and simulations.

PubMed

Xie, Zhimin; Girimaji, Sharath S

2014-04-01

We develop the perturbation equations to describe instability evolution in Poiseuille flow at the limit of very high Mach numbers. At this limit the equation governing the flow is the pressure-released Navier-Stokes equation. The ensuing semianalytical solution is compared against simulations performed using the gas-kinetic method (GKM), resulting in excellent agreement. A similar comparison between analytical and computational results of small perturbation growth is performed at the incompressible (zero Mach number) limit, again leading to excellent agreement. The study accomplishes two important goals: it (i) contrasts the small perturbation evolution in Poiseuille flows at extreme Mach numbers and (ii) provides important verification of the GKM simulation scheme.

Fuel cell with electrolyte matrix assembly

DOEpatents

Kaufman, Arthur; Pudick, Sheldon; Wang, Chiu L.

1988-01-01

This invention is directed to a fuel cell employing a substantially immobilized electrolyte imbedded therein and having a laminated matrix assembly disposed between the electrodes of the cell for holding and distributing the electrolyte. The matrix assembly comprises a non-conducting fibrous material such as silicon carbide whiskers having a relatively large void-fraction and a layer of material having a relatively small void-fraction.

Magnitude comparison with different types of rational numbers.

PubMed

DeWolf, Melissa; Grounds, Margaret A; Bassok, Miriam; Holyoak, Keith J

2014-02-01

An important issue in understanding mathematical cognition involves the similarities and differences between the magnitude representations associated with various types of rational numbers. For single-digit integers, evidence indicates that magnitudes are represented as analog values on a mental number line, such that magnitude comparisons are made more quickly and accurately as the numerical distance between numbers increases (the distance effect). Evidence concerning a distance effect for compositional numbers (e.g., multidigit whole numbers, fractions and decimals) is mixed. We compared the patterns of response times and errors for college students in magnitude comparison tasks across closely matched sets of rational numbers (e.g., 22/37, 0.595, 595). In Experiment 1, a distance effect was found for both fractions and decimals, but response times were dramatically slower for fractions than for decimals. Experiments 2 and 3 compared performance across fractions, decimals, and 3-digit integers. Response patterns for decimals and integers were extremely similar but, as in Experiment 1, magnitude comparisons based on fractions were dramatically slower, even when the decimals varied in precision (i.e., number of place digits) and could not be compared in the same way as multidigit integers (Experiment 3). Our findings indicate that comparisons of all three types of numbers exhibit a distance effect, but that processing often involves strategic focus on components of numbers. Fractions impose an especially high processing burden due to their bipartite (a/b) structure. In contrast to the other number types, the magnitude values associated with fractions appear to be less precise, and more dependent on explicit calculation. PsycINFO Database Record (c) 2014 APA, all rights reserved.

Extracellular polymer substance synthesized by a halophilic bacterium Chromohalobacter canadensis 28.

PubMed

Radchenkova, Nadja; Boyadzhieva, Ivanka; Atanasova, Nikolina; Poli, Annarita; Finore, Ilaria; Di Donato, Paola; Nicolaus, Barbara; Panchev, Ivan; Kuncheva, Margarita; Kambourova, Margarita

2018-04-03

Halophilic microorganisms are producers of a lot of new compounds whose properties suggest promising perspectives for their biotechnological exploration. Moderate halophilic bacterium Chromohalobacter canadensis 28 was isolated from Pomorie salterns as an extracellular polymer substance (EP) producer. The best carbon source for extracellular polymer production was found to be lactose, a sugar received as a by-product from the dairy industry. After optimization of the culture medium and physicochemical conditions for cultivation, polymer biosynthesis increased more than 2-fold. The highest level of extracellular polymer synthesis by C. canadensis 28 was observed in an unusually high NaCl concentration (15% w/v). Chemical analysis of the purified polymer revealed the presence of an exopolysaccharide (EPS) fraction (14.3% w/w) and protein fraction (72% w/w). HPLC analysis of the protein fraction showed the main presence of polyglutamic acid (PGA) (75.7% w/w). EPS fraction analysis revealed the following sugar composition (% w/w): glucosamine 36.7, glucose 32.3, rhamnose 25.4, xylose 1.7, and not identified sugar 3.9. The hydrogel formed by PGA and EPS fractions showed high swelling behavior, very good emulsifying and stabilizing properties, and good foaming ability. This is the first report for halophilic bacterium able to synthesize a polymer containing PGA fraction. The synthesized biopolymer shows an extremely high hydrophilicity, due to the simultaneous presence of PGA and EPS. The analysis of its functional properties and the presence of glucosamine in the highest proportion in EPS fraction clearly determine the potential of EP synthesized by C. canadensis 28 for application in the cosmetics industry.

Augmented water binding and low cellular water content in erythrocytes of camel and camelids.

PubMed

Bogner, P; Csutora, P; Cameron, I L; Wheatley, D N; Miseta, A

1998-12-01

We investigated a link between hemoglobin primary structure, hemoglobin hydrophobicity-hydrophilicity, and erythrocyte water content in various mammalian species. Some hemoglobin molecules, particularly those of the camel and camelids, contain more charged amino acid residues and are more hydrophilic than the hemoglobins of human and a number of other mammalian species. To test the in vivo significance of these alterations of hemoglobin primary structure, we determined the osmotically unresponsive erythrocyte water fractions in mannit solutions of various osmolarities at 4 degreesC. Among the species investigated, the size of the osmotically unresponsive erythrocyte water fraction relates in a positive linear way to hemoglobin hydrophilicity. The extreme low total erythrocyte water content of camel erythrocytes (1.1-1.3 g water/g dry mass) may be explained by a comparatively high osmotically unresponsive erythrocyte water fraction. It is proposed that alterations of hemoglobin sequences of camel and camelids may be the part of a natural selection process aimed at protecting these animals against osmotic dehydration in arid environments.

Geochemical study of the organic matter from Querecual formation, Anzoategui State, Venezuela

DOE Office of Scientific and Technical Information (OSTI.GOV)

Garban, G.; Lopez, L.; Lo Monaco, S.

1996-08-01

Kerogen and bitumen fractions extracted from twenty-one limestone samples from kind section of Querecual formation (Querecual River, Anzoategui State, Venezuela) were analyzed for their content of Co, Cr, Fe, Mn, Mo, Ni, S, Sr, V and Zn. S and trace-metals content from the kerogen fraction were used to obtain information about paleoenvironmental sedimentation conditions of the Querecual formation. Based on these data, and especially on the V and S content variations plus V/Ni, VIV+Ni and Mo/Mo+Cr ratios, we confirm an ancient-reducer condition on this region according with a sulfur-reducer environment. Trace-metals content variations from the bitumen fraction along the studymore » section were used as possible primary migration indicators. V and Ni were the only elements showing a clear tendency to be used as primary migration indicators. The observed tendency allows us to postulate a vertical migration of the bitumen, from center to the extremes of the section.« less

Augmented water binding and low cellular water content in erythrocytes of camel and camelids.

PubMed Central

Bogner, P; Csutora, P; Cameron, I L; Wheatley, D N; Miseta, A

1998-01-01

We investigated a link between hemoglobin primary structure, hemoglobin hydrophobicity-hydrophilicity, and erythrocyte water content in various mammalian species. Some hemoglobin molecules, particularly those of the camel and camelids, contain more charged amino acid residues and are more hydrophilic than the hemoglobins of human and a number of other mammalian species. To test the in vivo significance of these alterations of hemoglobin primary structure, we determined the osmotically unresponsive erythrocyte water fractions in mannit solutions of various osmolarities at 4 degreesC. Among the species investigated, the size of the osmotically unresponsive erythrocyte water fraction relates in a positive linear way to hemoglobin hydrophilicity. The extreme low total erythrocyte water content of camel erythrocytes (1.1-1.3 g water/g dry mass) may be explained by a comparatively high osmotically unresponsive erythrocyte water fraction. It is proposed that alterations of hemoglobin sequences of camel and camelids may be the part of a natural selection process aimed at protecting these animals against osmotic dehydration in arid environments. PMID:9826628

[Selected indicators of lipid metabolism in screening tests of managerial staffs].

PubMed

Cianciara, M; Bobilewicz, D; Kotlicka, J

1982-01-01

The studies covered 60 men (average age 43.5 +/- 6.5 years), carrying on managerial functions (average length of employment 8.3 +/- 2.5 years). All subjects underwent standard determinations of total cholesterol (Liebermann--Burchard's method) and triglycerides (using Boehringer's enzymatic set) and lypoproteins electrophoretic distribution on polyacrylamid gel (Ames' firm). In 31 subjects lypoproteins distribution was performed, through precipitation, into fractions HDL, LDL and HLDL, in which the contents of cholesterol and triglycerides have been determined. In 40% of subjects, hyperlypoproteidemia, type IV (HL-IV) has been found, which would indicate the advisability to cover the managerial personnel by such studies. The HL-IV has been found to be accompanied by an extreme increase of VLDL fraction triglycerides and a significant increase of cholesterol of this fraction. Moreover, the HDL cholesterol concentration has been found to be decreased, as compared to normolypo-proteidemia. The results of electrophoretic distribution indicated a good correlation with the results of total triglycerides in blood serum.

A constitutive relation for the viscous flow of an oriented fiber assembly

NASA Technical Reports Server (NTRS)

Pipes, R. B.; Hearle, J. W. S.; Beaussart, A. J.; Sastry, A. M.; Okine, R. K.

1991-01-01

A constitutive relation for an equivalent, homogeneous fluid is developed for the anisotropic viscous flow of an oriented assembly of discontinuous fibers suspended in a viscous fluid. The anisotropic viscous compliance matrix can be expressed in terms of three constants by assuming the equivalent fluid to be incompressible and the microstructure to have axial symmetry (transversely isotropic). By means of a micromechanics analysis, the three terms of the constitutive relation are expressed in terms of the viscosity of the matrix fluid, the fiber aspect ratio, and the fiber volume fraction. A comparison of the viscosity terms reveals that the elongational viscosity in the fiber direction varies as the square of the fiber aspect ratio and a complex function of the fiber volume fraction. Furthermore, the ratio of the axial elongational viscosity to the transverse elongational viscosity and both axial and transverse shear viscosities was shown to be 10 exp 4 - 10 exp 6 for fiber aspect ratio of 100-1000, except at extreme values of the fiber volume fraction.

CT acquisition technique and quantitative analysis of the lung parenchyma: variability and corrections

NASA Astrophysics Data System (ADS)

Zheng, Bin; Leader, J. K.; Coxson, Harvey O.; Scuirba, Frank C.; Fuhrman, Carl R.; Balkan, Arzu; Weissfeld, Joel L.; Maitz, Glenn S.; Gur, David

2006-03-01

The fraction of lung voxels below a pixel value "cut-off" has been correlated with pathologic estimates of emphysema. We performed a "standard" quantitative CT (QCT) lung analysis using a -950 HU cut-off to determine the volume fraction of emphysema (below the cut-off) and a "corrected" QCT analysis after removing small group (5 and 10 pixels) of connected pixels ("blobs") below the cut-off. CT examinations two dataset of 15 subjects each with a range of visible emphysema and pulmonary obstruction were acquired at "low-dose and conventional dose reconstructed using a high-spatial frequency kernel at 2.5 mm section thickness for the same subject. The "blob" size (i.e., connected-pixels) removed was inversely related to the computed fraction of emphysema. The slopes of emphysema fraction versus blob size were 0.013, 0.009, and 0.005 for subjects with both no emphysema and no pulmonary obstruction, moderate emphysema and pulmonary obstruction, and severe emphysema and severe pulmonary obstruction, respectively. The slopes of emphysema fraction versus blob size were 0.008 and 0.006 for low-dose and conventional CT examinations, respectively. The small blobs of pixels removed are most likely CT image artifacts and do not represent actual emphysema. The magnitude of the blob correction was appropriately associated with COPD severity. The blob correction appears to be applicable to QCT analysis in low-dose and conventional CT exams.

Design of a New Ultracompact Resonant Plasmonic Multi-Analyte Label-Free Biosensing Platform

PubMed Central

De Palo, Maripina; Ciminelli, Caterina

2017-01-01

In this paper, we report on the design of a bio-multisensing platform for the selective label-free detection of protein biomarkers, carried out through a 3D numerical algorithm. The platform includes a number of biosensors, each of them is based on a plasmonic nanocavity, consisting of a periodic metal structure to be deposited on a silicon oxide substrate. Light is strongly confined in a region with extremely small size (=1.57 μm2), to enhance the light-matter interaction. A surface sensitivity Ss = 1.8 nm/nm has been calculated together with a detection limit of 128 pg/mm2. Such performance, together with the extremely small footprint, allow the integration of several devices on a single chip to realize extremely compact lab-on-chip microsystems. In addition, each sensing element of the platform has a good chemical stability that is guaranteed by the selection of gold for its fabrication. PMID:28783075

Extremely rare collapse and build-up of turbulence in stochastic models of transitional wall flows.

PubMed

Rolland, Joran

2018-02-01

This paper presents a numerical and theoretical study of multistability in two stochastic models of transitional wall flows. An algorithm dedicated to the computation of rare events is adapted on these two stochastic models. The main focus is placed on a stochastic partial differential equation model proposed by Barkley. Three types of events are computed in a systematic and reproducible manner: (i) the collapse of isolated puffs and domains initially containing their steady turbulent fraction; (ii) the puff splitting; (iii) the build-up of turbulence from the laminar base flow under a noise perturbation of vanishing variance. For build-up events, an extreme realization of the vanishing variance noise pushes the state from the laminar base flow to the most probable germ of turbulence which in turn develops into a full blown puff. For collapse events, the Reynolds number and length ranges of the two regimes of collapse of laminar-turbulent pipes, independent collapse or global collapse of puffs, is determined. The mean first passage time before each event is then systematically computed as a function of the Reynolds number r and pipe length L in the laminar-turbulent coexistence range of Reynolds number. In the case of isolated puffs, the faster-than-linear growth with Reynolds number of the logarithm of mean first passage time T before collapse is separated in two. One finds that ln(T)=A_{p}r-B_{p}, with A_{p} and B_{p} positive. Moreover, A_{p} and B_{p} are affine in the spatial integral of turbulence intensity of the puff, with the same slope. In the case of pipes initially containing the steady turbulent fraction, the length L and Reynolds number r dependence of the mean first passage time T before collapse is also separated. The author finds that T≍exp[L(Ar-B)] with A and B positive. The length and Reynolds number dependence of T are then discussed in view of the large deviations theoretical approaches of the study of mean first passage times and multistability, where ln(T) in the limit of small variance noise is studied. Two points of view, local noise of small variance and large length, can be used to discuss the exponential dependence in L of T. In particular, it is shown how a T≍exp[L(A^{'}R-B^{'})] can be derived in a conceptual two degrees of freedom model of a transitional wall flow proposed by Dauchot and Manneville. This is done by identifying a quasipotential in low variance noise, large length limit. This pinpoints the physical effects controlling collapse and build-up trajectories and corresponding passage times with an emphasis on the saddle points between laminar and turbulent states. This analytical analysis also shows that these effects lead to the asymmetric probability density function of kinetic energy of turbulence.

Extremely rare collapse and build-up of turbulence in stochastic models of transitional wall flows

NASA Astrophysics Data System (ADS)

Rolland, Joran

2018-02-01

This paper presents a numerical and theoretical study of multistability in two stochastic models of transitional wall flows. An algorithm dedicated to the computation of rare events is adapted on these two stochastic models. The main focus is placed on a stochastic partial differential equation model proposed by Barkley. Three types of events are computed in a systematic and reproducible manner: (i) the collapse of isolated puffs and domains initially containing their steady turbulent fraction; (ii) the puff splitting; (iii) the build-up of turbulence from the laminar base flow under a noise perturbation of vanishing variance. For build-up events, an extreme realization of the vanishing variance noise pushes the state from the laminar base flow to the most probable germ of turbulence which in turn develops into a full blown puff. For collapse events, the Reynolds number and length ranges of the two regimes of collapse of laminar-turbulent pipes, independent collapse or global collapse of puffs, is determined. The mean first passage time before each event is then systematically computed as a function of the Reynolds number r and pipe length L in the laminar-turbulent coexistence range of Reynolds number. In the case of isolated puffs, the faster-than-linear growth with Reynolds number of the logarithm of mean first passage time T before collapse is separated in two. One finds that ln(T ) =Apr -Bp , with Ap and Bp positive. Moreover, Ap and Bp are affine in the spatial integral of turbulence intensity of the puff, with the same slope. In the case of pipes initially containing the steady turbulent fraction, the length L and Reynolds number r dependence of the mean first passage time T before collapse is also separated. The author finds that T ≍exp[L (A r -B )] with A and B positive. The length and Reynolds number dependence of T are then discussed in view of the large deviations theoretical approaches of the study of mean first passage times and multistability, where ln(T ) in the limit of small variance noise is studied. Two points of view, local noise of small variance and large length, can be used to discuss the exponential dependence in L of T . In particular, it is shown how a T ≍exp[L (A'R -B') ] can be derived in a conceptual two degrees of freedom model of a transitional wall flow proposed by Dauchot and Manneville. This is done by identifying a quasipotential in low variance noise, large length limit. This pinpoints the physical effects controlling collapse and build-up trajectories and corresponding passage times with an emphasis on the saddle points between laminar and turbulent states. This analytical analysis also shows that these effects lead to the asymmetric probability density function of kinetic energy of turbulence.

Repeated Small Bowel Obstruction Caused by Chestnut Ingestion without the Formation of Phytobezoars.

PubMed

Satake, Ryu; Chinda, Daisuke; Shimoyama, Tadashi; Satake, Miwa; Oota, Rie; Sato, Satoshi; Yamai, Kiyonori; Hachimori, Hisashi; Okamoto, Yutaka; Yamada, Kyogo; Matsuura, Osamu; Hashizume, Tadashi; Soma, Yasushi; Fukuda, Shinsaku

2016-01-01

A small number of cases of small bowel obstruction caused by foods without the formation of phytobezoars have been reported. Repeated small bowel obstruction due to the ingestion of the same food is extremely rare. We present the case of 63-year-old woman who developed small bowel obstruction twice due to the ingestion of chestnuts without the formation of phytobezoars. This is the first reported case of repeated small bowel obstruction caused by chestnut ingestion. Careful interviews are necessary to determine the meal history of elderly patients and psychiatric patients.

Evaluation of the mobility and pollution index of selected essential/toxic metals in paddy soil by sequential extraction method.

PubMed

Hasan, Maria; Kausar, Dilshad; Akhter, Gulraiz; Shah, Munir H

2018-01-01

Comparative distribution and mobility of selected essential and toxic metals in the paddy soil from district Sargodha, Pakistan was evaluated by the modified Community Bureau of Reference (mBCR) sequential extraction procedure. Most of the soil samples showed slightly alkaline nature while the soil texture was predominantly silty loam in nature. The metal contents were quantified in the exchangeable, reducible, oxidisable and residual fractions of the soil by flame atomic absorption spectrophotometry and the metal data were subjected to the statistical analyses in order to evaluate the mutual relationships among the metals in each fraction. Among the metals, Ca, Sr and Mn were found to be more mobile in the soil. A number of significant correlations between different metal pairs were noted in various fractions. Contamination factor, geoaccumulation index and enrichment factor revealed extremely severe enrichment/contamination for Cd; moderate to significant enrichment/contamination for Ni, Zn, Co and Pb while Cr, Sr, Cu and Mn revealed minimal to moderate contamination and accumulation in the soil. Multivariate cluster analysis showed significant anthropogenic intrusions of the metals in various fractions. Copyright © 2017 Elsevier Inc. All rights reserved.

Inequality in nature and society

PubMed Central

Scheffer, Marten; van Bavel, Bas; van de Leemput, Ingrid A.; van Nes, Egbert H.

2017-01-01

Most societies are economically dominated by a small elite, and similarly, natural communities are typically dominated by a small fraction of the species. Here we reveal a strong similarity between patterns of inequality in nature and society, hinting at fundamental unifying mechanisms. We show that chance alone will drive 1% or less of the community to dominate 50% of all resources in situations where gains and losses are multiplicative, as in returns on assets or growth rates of populations. Key mechanisms that counteract such hyperdominance include natural enemies in nature and wealth-equalizing institutions in society. However, historical research of European developments over the past millennium suggests that such institutions become ineffective in times of societal upscaling. A corollary is that in a globalizing world, wealth will inevitably be appropriated by a very small fraction of the population unless effective wealth-equalizing institutions emerge at the global level. PMID:29183971

Morphology of human embryonic kidney cells in culture after space flight

NASA Technical Reports Server (NTRS)

Todd, P.; Kunze, M. E.; Williams, K.; Morrison, D. R.; Lewis, M. L.; Barlow, G. H.

1985-01-01

The ability of human embyronic kidney cells to differentiate into small epithelioid, large epithelioid, domed, and fenestrated morphological cell types following space flight is examined. Kidney cells exposed to 1 day at 1 g, then 1 day in orbit, and a 12 minute passage through the electrophoretic separator are compared with control cultures. The data reveal that 70 percent of small epithelioid, 16 percent of large epithelioid, 9 percent of dome-forming, and 5 percent of fenestrated cells formed in the space exposed cells; the distributions correlate well with control data. The formation of domed cells from cells cultured from low electrophoretic mobility fractions and small epithelioid cells from high mobility fractions is unaffected by space flight conditions. It is concluded that storage under microgravity conditions does not influence the morphological differentiation of human embryonic kidney cells in low-passage culture.

Localized sources of propagating acoustic waves in the solar photosphere

NASA Technical Reports Server (NTRS)

Brown, Timothy M.; Bogdan, Thomas J.; Lites, Bruce W.; Thomas, John H.

1992-01-01

A time series of Doppler measurements of the solar photosphere with moderate spatial resolution is described which covers a portion of the solar disk surrounding a small sunspot group. At temporal frequencies above 5.5 mHz, the Doppler field probes the spatial and temporal distribution of regions that emit acoustic energy. In the frequency range between 5.5 and 7.5 mHz, inclusive, a small fraction of the surface area emits a disproportionate amount of acoustic energy. The regions with excess emission are characterized by a patchy structure at spatial scales of a few arcseconds and by association (but not exact co-location) with regions having substantial magnetic field strength. These observations bear on the conjecture that most of the acoustic energy driving solar p-modes is created in localized regions occupying a small fraction of the solar surface area.

Extreme Soft Limit Observation of Quantum Hall Effect in a 3-d Semiconductor

NASA Astrophysics Data System (ADS)

Bleiweiss, Michael; Yin, Ming; Amirzadeh, Jafar; Preston, Harry; Datta, Timir

2004-03-01

We report on the evidence for quantum hall effect at 38K and in magnetic fields (B) as low as 1k-Orsted. Our specimens were semiconducting, carbon replica opal (CRO) structures. CRO are three dimensional bulk systems where the carbon is grown by CVD into the porous regions in artificial silica opals. The carbon forms layers on top of the silica spheres as eggshells. The shells are of uneven thickness and are perforated at the contacts points of the opal spheres and form a closed packed, three dimensional crystal structure. Plateaus in inverse R_xy that are conjugated with well-defined Subnikov-deHass modulations in R_xx were observed. The quantum steps that are particularly prominent were the states with fill factors v = p/q (p,q are integers) were the well know fractions, 1/3, 1/2, 3/5, 1 and 5/2. QHE steps indicate that the carriers are localized in two-dimensional regions, which may be due to the extremely large surface to volume ratio associated with replica opal structure. From the B-1 vs v straight line, the effective surface carrier density, ns = 2.2 x 10^14 m-2. To the best of our knowledge, the current work is the first to report fractional quantum hall plateaus in a bulk system.

Tensor modes on the string theory landscape

NASA Astrophysics Data System (ADS)

Westphal, Alexander

2013-04-01

We attempt an estimate for the distribution of the tensor mode fraction r over the landscape of vacua in string theory. The dynamics of eternal inflation and quantum tunneling lead to a kind of democracy on the landscape, providing no bias towards large-field or small-field inflation regardless of the class of measure. The tensor mode fraction then follows the number frequency distributions of inflationary mechanisms of string theory over the landscape. We show that an estimate of the relative number frequencies for small-field vs large-field inflation, while unattainable on the whole landscape, may be within reach as a regional answer for warped Calabi-Yau flux compactifications of type IIB string theory.

Degradation of surfactant-associated protein B (SP-B) during in vitro conversion of large to small surfactant aggregates.

PubMed Central

Veldhuizen, R A; Inchley, K; Hearn, S A; Lewis, J F; Possmayer, F

1993-01-01

Pulmonary surfactant obtained from lung lavages can be separated by differential centrifugation into two distinct subfractions known as large surfactant aggregates and small surfactant aggregates. The large-aggregate fraction is the precursor of the small-aggregate fraction. The ratio of the small non-surface-active to large surface-active surfactant aggregates increases after birth and in several types of lung injury. We have utilized an in vitro system, surface area cycling, to study the conversion of large into small aggregates. Small aggregates generated by surface area cycling were separated from large aggregates by centrifugation at 40,000 g for 15 min rather than by the normal sucrose gradient centrifugation. This new separation method was validated by morphological studies. Surface-tension-reducing activity of total surfactant extracts, as measured with a pulsating-bubble surfactometer, was impaired after surface area cycling. This impairment was related to the generation of small aggregates. Immunoblot analysis of large and small aggregates separated by sucrose gradient centrifugation revealed the presence of detectable amounts of surfactant-associated protein B (SP-B) in large aggregates but not in small aggregates. SP-A was detectable in both large and small aggregates. PAGE of cycled and non-cycled surfactant showed a reduction in SP-B after surface area cycling. We conclude that SP-B is degraded during the formation of small aggregates in vitro and that a change in surface area appears to be necessary for exposing SP-B to protease activity. Images Figure 2 Figure 5 Figure 6 Figure 7 PMID:8216208

The evolution of extreme precipitations in high resolution scenarios over France

NASA Astrophysics Data System (ADS)

Colin, J.; Déqué, M.; Somot, S.

2009-09-01

Over the past years, improving the modelling of extreme events and their variability at climatic time scales has become one of the challenging issue raised in the regional climate research field. This study shows the results of a high resolution (12 km) scenario run over France with the limited area model (LAM) ALADIN-Climat, regarding the representation of extreme precipitations. The runs were conducted in the framework of the ANR-SCAMPEI national project on high resolution scenarios over French mountains. As a first step, we attempt to quantify one of the uncertainties implied by the use of LAM : the size of the area on which the model is run. In particular, we address the issue of whether a relatively small domain allows the model to create its small scale process. Indeed, high resolution scenarios cannot be run on large domains because of the computation time. Therefore one needs to answer this preliminary question before producing and analyzing such scenarios. To do so, we worked in the framework of a « big brother » experiment. We performed a 23-year long global simulation in present-day climate (1979-2001) with the ARPEGE-Climat GCM, at a resolution of approximately 50 km over Europe (stretched grid). This first simulation, named ARP50, constitutes the « big brother » reference of our experiment. It has been validated in comparison with the CRU climatology. Then we filtered the short waves (up to 200 km) from ARP50 in order to obtain the equivalent of coarse resolution lateral boundary conditions (LBC). We have carried out three ALADIN-Climat simulations at a 50 km resolution with these LBC, using different configurations of the model : * FRA50, run over a small domain (2000 x 2000 km, centered over France), * EUR50, run over a larger domain (5000 x 5000 km, centered over France as well), * EUR50-SN, run over the large domain (using spectral nudging). Considering the facts that ARPEGE-Climat and ALADIN-Climat models share the same physics and dynamics and that both regional and global simulations were run at the same resolution, ARP50 can be regarded as a reference with which FRA50, EUR50 and EUR50-SN should each be compared. After an analysis of the differences between the regional simulations and ARP50 in annual and seasonal mean, we focus on the representation of rainfall extremes comparing two dimensional fields of various index inspired from STARDEX and quantile-quantile plots. The results show a good agreement with the ARP50 reference for all three regional simulations and little differences are found between them. This result indicates that the use of small domains is not significantly detrimental to the modelling of extreme precipitation events. It also shows that the spectral nudging technique has no detrimental effect on the extreme precipitation. Therefore, high resolution scenarios performed on a relatively small domain such as the ones run for SCAMPEI, can be regarded as good tools to explore their possible evolution in the future climate. Preliminary results on the response of precipitation extremes over South-East France are given.

Work-related burns.

PubMed

Pruitt, Valerie M

2006-01-01

Work-related upper extremity burns often occur. The cause directs the course of action. Thermal burns should be assessed for system alterations, and depth of burn should be determined. Deep partial-thickness burns and more severe burns require a specialist evaluation. Chemical burns must be irrigated and the agent identified. Some chemical burns, such as those that involve phenols and metal fragments, require specific topical applications before water lavage. Hydrofluoric acid burns can cause life-threatening electrolyte abnormalities with a small, highly concentrated acid burn. The goal with any extremity burn is to provide the patient with a multidisciplinary team approach to achieve a functional, usable extremity.

Controllable gaussian-qubit interface for extremal quantum state engineering.

PubMed

Adesso, Gerardo; Campbell, Steve; Illuminati, Fabrizio; Paternostro, Mauro

2010-06-18

We study state engineering through bilinear interactions between two remote qubits and two-mode gaussian light fields. The attainable two-qubit states span the entire physically allowed region in the entanglement-versus-global-purity plane. Two-mode gaussian states with maximal entanglement at fixed global and marginal entropies produce maximally entangled two-qubit states in the corresponding entropic diagram. We show that a small set of parameters characterizing extremally entangled two-mode gaussian states is sufficient to control the engineering of extremally entangled two-qubit states, which can be realized in realistic matter-light scenarios.

Stabilization of ancient organic matter in deep buried paleosols

NASA Astrophysics Data System (ADS)

Marin-Spiotta, E.; Chaopricha, N. T.; Mueller, C.; Diefendorf, A. F.; Plante, A. F.; Grandy, S.; Mason, J. A.

2012-12-01

Buried soils representing ancient surface horizons can contain large organic carbon reservoirs that may interact with the atmosphere if exposed by erosion, road construction, or strip mining. Paleosols in long-term depositional sites provide a unique opportunity for studying the importance of different mechanisms on the persistence of organic matter (OM) over millennial time-scales. We report on the chemistry and bioavailability of OM stored in the Brady soil, a deeply buried (7 m) paleosol in loess deposits of southwestern Nebraska, USA. The Brady Soil developed 9,000-13,500 years ago during a time of warming and drying. The Brady soil represents a dark brown horizon enriched in C relative to loess immediately above and below. Spanning much of the central Great Plains, this buried soil contains large C stocks due to the thickness of its A horizon (0.5 to 1 m) and wide geographic extent. Our research provides a unique perspective on long-term OM stabilization in deep soils using multiple analytical approaches. Soils were collected from the Brady soil A horizon (at 7 m depth) and modern surface A horizons (0-15 cm) at two sites for comparison. Soils were separated by density fractionation using 1.85 g ml-1 sodium polytungstate into: free particulate organic matter (fPOM) and aggregate-occluded (oPOM) of two size classes (large: >20 μm, and small: < 20 μm). The remaining dense fraction was separated into sand, silt, and clay size fractions. The distribution and age of C among density and particle-size fractions differed between surface and Brady soils. We isolated the source of the characteristic dark coloring of the Brady soil to the oPOM-small fraction, which also contained 20% of the total organic C pool in the Brady soil. The oPOM-small fraction and the bulk soil in the middle of the Brady A horizon had 14C ages of 10,500-12,400 cal yr BP, within the time that the soil was actively forming at the land surface. Surface soils showed modern ages. Lipid analyses of the Brady soil indicate a predominance of terrestrial vegetation biomarkers. The strong presence of vascular plant-derived terpenoids and long-chain n-alkyl lipids suggest a grassland origin. Respiration rates of the buried soil in a laboratory incubation were negligible compared to modern surface A and B horizons, and responded little to wetting. These results suggest that moisture alone does not limit decomposition in the buried soil, at least over the 120-day incubation. Solid-state 13C-NMR spectroscopy reveals that the Brady soil is enriched in aromatic C, with high contributions of char, especially in the oPOM-small fraction. Thermal analysis showed high thermal stability of oPOM-small and bulk soils in the Brady soil compared to modern surface horizons. Radiocarbon ages and chemical composition of OM isolated from a deep paleosol suggest little modification since burial and may indicate rapid stabilization of plant-derived organic C by burial. The accumulation of char in the aggregate-protected fraction of the Brady soil provides additional evidence for warming and drying conditions during the time of loess deposition at this site. Developing a better understanding of the mechanisms that control long-term SOM stabilization is important for understanding how soil C is sequestered over millennia and for predicting how future disturbances may affect deep soil C.

Critical dose and toxicity index of organs at risk in radiotherapy: Analyzing the calculated effects of modified dose fractionation in non–small cell lung cancer

DOE Office of Scientific and Technical Information (OSTI.GOV)

Pedicini, Piernicola, E-mail: ppiern@libero.it; Strigari, Lidia; Benassi, Marcello

2014-04-01

To increase the efficacy of radiotherapy for non–small cell lung cancer (NSCLC), many schemes of dose fractionation were assessed by a new “toxicity index” (I), which allows one to choose the fractionation schedules that produce less toxic treatments. Thirty-two patients affected by non resectable NSCLC were treated by standard 3-dimensional conformal radiotherapy (3DCRT) with a strategy of limited treated volume. Computed tomography datasets were employed to re plan by simultaneous integrated boost intensity-modulated radiotherapy (IMRT). The dose distributions from plans were used to test various schemes of dose fractionation, in 3DCRT as well as in IMRT, by transforming the dose-volumemore » histogram (DVH) into a biological equivalent DVH (BDVH) and by varying the overall treatment time. The BDVHs were obtained through the toxicity index, which was defined for each of the organs at risk (OAR) by a linear quadratic model keeping an equivalent radiobiological effect on the target volume. The less toxic fractionation consisted in a severe/moderate hyper fractionation for the volume including the primary tumor and lymph nodes, followed by a hypofractionation for the reduced volume of the primary tumor. The 3DCRT and IMRT resulted, respectively, in 4.7% and 4.3% of dose sparing for the spinal cord, without significant changes for the combined-lungs toxicity (p < 0.001). Schedules with reduced overall treatment time (accelerated fractionations) led to a 12.5% dose sparing for the spinal cord (7.5% in IMRT), 8.3% dose sparing for V{sub 20} in the combined lungs (5.5% in IMRT), and also significant dose sparing for all the other OARs (p < 0.001). The toxicity index allows to choose fractionation schedules with reduced toxicity for all the OARs and equivalent radiobiological effect for the tumor in 3DCRT, as well as in IMRT, treatments of NSCLC.« less

The Origins of Order: Self-Organization and Selection in Evolution

NASA Astrophysics Data System (ADS)

Kauffman, Stuart A.

The following sections are included: * Introduction * Fitness Landscapes in Sequence Space * The NK Model of Rugged Fitness Landscapes * The NK Model of Random Epistatic Interactions * The Rank Order Statistics on K = N - 1 Random Landscapes * The number of local optima is very large * The expected fraction of fitter 1-mutant neighbors dwindles by 1/2 on each improvement step * Walks to local optima are short and vary as a logarithmic function of N * The expected time to reach an optimum is proportional to the dimensionality of the space * The ratio of accepted to tried mutations scales as lnN/N * Any genotype can only climb to a small fraction of the local optima * A small fraction of the genotypes can climb to any one optimum * Conflicting constraints cause a "complexity catastrophe": as complexity increase accessible adaptive peaks fall toward the mean fitness * The "Tunable" NK Family of Correlated Landscapes * Other Combinatorial Optimization Problems and Their Landscapes * Summary * References

Dynamic heterogeneities and non-Gaussian behavior in two-dimensional randomly confined colloidal fluids

NASA Astrophysics Data System (ADS)

Schnyder, Simon K.; Skinner, Thomas O. E.; Thorneywork, Alice L.; Aarts, Dirk G. A. L.; Horbach, Jürgen; Dullens, Roel P. A.

2017-03-01

A binary mixture of superparamagnetic colloidal particles is confined between glass plates such that the large particles become fixed and provide a two-dimensional disordered matrix for the still mobile small particles, which form a fluid. By varying fluid and matrix area fractions and tuning the interactions between the superparamagnetic particles via an external magnetic field, different regions of the state diagram are explored. The mobile particles exhibit delocalized dynamics at small matrix area fractions and localized motion at high matrix area fractions, and the localization transition is rounded by the soft interactions [T. O. E. Skinner et al., Phys. Rev. Lett. 111, 128301 (2013), 10.1103/PhysRevLett.111.128301]. Expanding on previous work, we find the dynamics of the tracers to be strongly heterogeneous and show that molecular dynamics simulations of an ideal gas confined in a fixed matrix exhibit similar behavior. The simulations show how these soft interactions make the dynamics more heterogeneous compared to the disordered Lorentz gas and lead to strong non-Gaussian fluctuations.

Method for detection of long-lived radioisotopes in small biochemical samples

DOEpatents

Turteltaub, K.W.; Vogel, J.S.; Felton, J.S.; Gledhill, B.L.; Davis, J.C.

1994-11-22

Disclosed is a method for detection of long-lived radioisotopes in small biochemical samples, comprising: a. selecting a biological host in which radioisotopes are present in concentrations equal to or less than those in the ambient biosphere, b. preparing a long-lived radioisotope labeled reactive chemical specie, c. administering the chemical specie to the biologist host in doses sufficiently low to avoid significant overt damage to the biological system, d. allowing a period of time to elapse sufficient for dissemination and interaction of the chemical specie with the host throughout the biological system of the host, e. isolating a reacted fraction of the biological substance from the host in a manner sufficient to avoid contamination of the substance from extraneous sources, f. converting the fraction of biological substance by suitable means to a material which efficiently produces charged ions in at least one of several possible ion sources without introduction of significant isotopic fractionation, and, g. measuring the radioisotope concentration in the material by means of direct isotopic counting. 5 figs.

The net fractional depth dose: a basis for a unified analytical description of FDD, TAR, TMR, and TPR.

PubMed

van de Geijn, J; Fraass, B A

1984-01-01

The net fractional depth dose (NFD) is defined as the fractional depth dose (FDD) corrected for inverse square law. Analysis of its behavior as a function of depth, field size, and source-surface distance has led to an analytical description with only seven model parameters related to straightforward physical properties. The determination of the characteristic parameter values requires only seven experimentally determined FDDs. The validity of the description has been tested for beam qualities ranging from 60Co gamma rays to 18-MV x rays, using published data from several different sources as well as locally measured data sets. The small number of model parameters is attractive for computer or hand-held calculator applications. The small amount of required measured data is important in view of practical data acquisition for implementation of a computer-based dose calculation system. The generating function allows easy and accurate generation of FDD, tissue-air ratio, tissue-maximum ratio, and tissue-phantom ratio tables.

Net fractional depth dose: a basis for a unified analytical description of FDD, TAR, TMR, and TPR

DOE Office of Scientific and Technical Information (OSTI.GOV)

van de Geijn, J.; Fraass, B.A.

The net fractional depth dose (NFD) is defined as the fractional depth dose (FDD) corrected for inverse square law. Analysis of its behavior as a function of depth, field size, and source-surface distance has led to an analytical description with only seven model parameters related to straightforward physical properties. The determination of the characteristic parameter values requires only seven experimentally determined FDDs. The validity of the description has been tested for beam qualities ranging from /sup 60/Co gamma rays to 18-MV x rays, using published data from several different sources as well as locally measured data sets. The small numbermore » of model parameters is attractive for computer or hand-held calculator applications. The small amount of required measured data is important in view of practical data acquisition for implementation of a computer-based dose calculation system. The generating function allows easy and accurate generation of FDD, tissue-air ratio, tissue-maximum ratio, and tissue-phantom ratio tables.« less

Method for detection of long-lived radioisotopes in small biochemical samples

DOEpatents

Turteltaub, Kenneth W.; Vogel, John S.; Felton, James S.; Gledhill, Barton L.; Davis, Jay C.

1994-01-01

Disclosed is a method for detection of long-lived radioisotopes in small bio-chemical samples, comprising: a. selecting a biological host in which radioisotopes are present in concentrations equal to or less than those in the ambient biosphere, b. preparing a long-lived radioisotope labeled reactive chemical specie, c. administering said chemical specie to said biologist host in doses sufficiently low to avoid significant overt damage to the biological system thereof, d. allowing a period of time to elapse sufficient for dissemination and interaction of said chemical specie with said host throughout said biological system of said host, e. isolating a reacted fraction of the biological substance from said host in a manner sufficient to avoid contamination of said substance from extraneous sources, f. converting said fraction of biological substance by suitable means to a material which efficiently produces charged ions in at least one of several possible ion sources without introduction of significant isotopic fractionation, and, g. measuring the radioisotope concentration in said material by means of direct isotopic counting.